BLAST Search Results


BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv1566c

Length=230
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15841033|ref|NP_336070.1|  NLP/P60 family protein [Mycobacteri...   443    1e-122
gi|15608704|ref|NP_216082.1|  inv protein [Mycobacterium tubercul...   441    4e-122
gi|339631637|ref|YP_004723279.1|  inv protein [Mycobacterium afri...   438    3e-121
gi|289761729|ref|ZP_06521107.1|  conserved hypothetical protein [...   429    2e-118
gi|254550585|ref|ZP_05141032.1|  invasion-associated protein [Myc...   427    7e-118
gi|340626587|ref|YP_004745039.1|  putative inv protein [Mycobacte...   414    7e-114
gi|289757681|ref|ZP_06517059.1|  inv protein [Mycobacterium tuber...   372    2e-101
gi|289569603|ref|ZP_06449830.1|  invasion-associated protein [Myc...   369    1e-100
gi|240167953|ref|ZP_04746612.1|  inv protein [Mycobacterium kansa...   325    2e-87 
gi|2791843|gb|AAB96954.1|  unknown [Mycobacterium bovis BCG]           325    3e-87 
gi|254820217|ref|ZP_05225218.1|  NlpC/P60 family protein [Mycobac...   313    8e-84 
gi|118464813|ref|YP_882390.1|  NlpC/P60 family protein [Mycobacte...   308    4e-82 
gi|254775657|ref|ZP_05217173.1|  NlpC/P60 family protein [Mycobac...   308    5e-82 
gi|342860851|ref|ZP_08717501.1|  NlpC/P60 family protein [Mycobac...   308    5e-82 
gi|41407370|ref|NP_960206.1|  hypothetical protein MAP1272c [Myco...   307    6e-82 
gi|118617207|ref|YP_905539.1|  inv protein [Mycobacterium ulceran...   300    1e-79 
gi|336457923|gb|EGO36914.1|  cell wall-associated hydrolase, inva...   298    4e-79 
gi|15827616|ref|NP_301879.1|  p60-family protein [Mycobacterium l...   283    1e-74 
gi|296164445|ref|ZP_06847019.1|  NLP/P60 family protein [Mycobact...   283    2e-74 
gi|466806|gb|AAA17082.1|  inv [Mycobacterium leprae]                   280    2e-73 
gi|293651838|pdb|3GT2|A  Chain A, Crystal Structure Of The P60 Do...   240    1e-61 
gi|118468647|ref|YP_887781.1|  inv protein [Mycobacterium smegmat...   178    4e-43 
gi|120403952|ref|YP_953781.1|  NLP/P60 protein [Mycobacterium van...   176    3e-42 
gi|145223840|ref|YP_001134518.1|  NLP/P60 protein [Mycobacterium ...   171    8e-41 
gi|315444169|ref|YP_004077048.1|  cell wall-associated hydrolase,...   169    2e-40 
gi|169629560|ref|YP_001703209.1|  hypothetical protein MAB_2474 [...   164    9e-39 
gi|8439559|gb|AAF74990.1|AF143397_1  putative invasin 996A009 [My...   163    2e-38 
gi|108799418|ref|YP_639615.1|  NLP/P60 [Mycobacterium sp. MCS] >g...   162    3e-38 
gi|333990877|ref|YP_004523491.1|  invasion and intracellular pers...   161    8e-38 
gi|145223426|ref|YP_001134104.1|  NLP/P60 protein [Mycobacterium ...   159    2e-37 
gi|118465185|ref|YP_882483.1|  invasion protein [Mycobacterium av...   159    3e-37 
gi|48928132|gb|AAT47744.1|  hypothetical invasion protein [Mycoba...   159    3e-37 
gi|41407301|ref|NP_960137.1|  hypothetical protein MAP1203 [Mycob...   159    4e-37 
gi|120403731|ref|YP_953560.1|  NLP/P60 protein [Mycobacterium van...   159    4e-37 
gi|120403324|ref|YP_953153.1|  NLP/P60 protein [Mycobacterium van...   159    4e-37 
gi|296392615|ref|YP_003657499.1|  NLP/P60 protein [Segniliparus r...   159    4e-37 
gi|317509377|ref|ZP_07966996.1|  NlpC/P60 family protein [Segnili...   158    5e-37 
gi|145224247|ref|YP_001134925.1|  NLP/P60 protein [Mycobacterium ...   158    5e-37 
gi|108798411|ref|YP_638608.1|  NLP/P60 [Mycobacterium sp. MCS] >g...   158    6e-37 
gi|126435282|ref|YP_001070973.1|  NLP/P60 protein [Mycobacterium ...   157    1e-36 
gi|15608615|ref|NP_215993.1|  invasion protein [Mycobacterium tub...   157    1e-36 
gi|340626492|ref|YP_004744944.1|  hypothetical protein MCAN_14941...   157    1e-36 
gi|339294452|gb|AEJ46563.1|  invasion protein [Mycobacterium tube...   157    1e-36 
gi|145221489|ref|YP_001132167.1|  NLP/P60 protein [Mycobacterium ...   157    2e-36 
gi|315441513|ref|YP_004074390.1|  cell wall-associated hydrolase,...   156    2e-36 
gi|126437131|ref|YP_001072822.1|  NLP/P60 protein [Mycobacterium ...   156    2e-36 
gi|326903103|gb|EGE50036.1|  invasion-associated protein [Mycobac...   156    3e-36 
gi|119855103|ref|YP_935708.1|  NLP/P60 protein [Mycobacterium sp....   155    3e-36 
gi|342858768|ref|ZP_08715423.1|  hypothetical protein MCOL_07821 ...   155    4e-36 
gi|120404621|ref|YP_954450.1|  NLP/P60 protein [Mycobacterium van...   155    4e-36 


>gi|15841033|ref|NP_336070.1| NLP/P60 family protein [Mycobacterium tuberculosis CDC1551]
 gi|148822789|ref|YP_001287543.1| inv protein [Mycobacterium tuberculosis F11]
 gi|253799380|ref|YP_003032381.1| invasion-associated protein [Mycobacterium tuberculosis KZN 1435]
 12 more sequence titles
 gi|254231789|ref|ZP_04925116.1| hypothetical protein TBCG_01538 [Mycobacterium tuberculosis C]
 gi|254364435|ref|ZP_04980481.1| hypothetical inv protein [Mycobacterium tuberculosis str. Haarlem]
 gi|289554643|ref|ZP_06443853.1| inv protein [Mycobacterium tuberculosis KZN 605]
 gi|289745321|ref|ZP_06504699.1| inv protein [Mycobacterium tuberculosis 02_1987]
 gi|13881244|gb|AAK45884.1| NLP/P60 family protein [Mycobacterium tuberculosis CDC1551]
 gi|124600848|gb|EAY59858.1| hypothetical protein TBCG_01538 [Mycobacterium tuberculosis C]
 gi|134149949|gb|EBA41994.1| hypothetical inv protein [Mycobacterium tuberculosis str. Haarlem]
 gi|148721316|gb|ABR05941.1| hypothetical inv protein [Mycobacterium tuberculosis F11]
 gi|253320883|gb|ACT25486.1| invasion-associated protein [Mycobacterium tuberculosis KZN 1435]
 gi|289439275|gb|EFD21768.1| inv protein [Mycobacterium tuberculosis KZN 605]
 gi|289685849|gb|EFD53337.1| inv protein [Mycobacterium tuberculosis 02_1987]
 gi|328459130|gb|AEB04553.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
4207]
Length=249

 Score =  443 bits (1139),  Expect = 1e-122, Method: Compositional matrix adjust.
 Identities = 230/230 (100%), Positives = 230/230 (100%), Gaps = 0/230 (0%)

Query  1    MKRSMKSGSFAIGLAMMLAPMVAAPGLAAADPATRPVDYQQITDVVIARGLSQRGVPFSW  60
            MKRSMKSGSFAIGLAMMLAPMVAAPGLAAADPATRPVDYQQITDVVIARGLSQRGVPFSW
Sbjct  20   MKRSMKSGSFAIGLAMMLAPMVAAPGLAAADPATRPVDYQQITDVVIARGLSQRGVPFSW  79

Query  61   AGGGISGPTRGTGTGINTVGFDASGLIQYAYAGAGLKLPRSSGQMYKVGQKVLPQQARKG  120
            AGGGISGPTRGTGTGINTVGFDASGLIQYAYAGAGLKLPRSSGQMYKVGQKVLPQQARKG
Sbjct  80   AGGGISGPTRGTGTGINTVGFDASGLIQYAYAGAGLKLPRSSGQMYKVGQKVLPQQARKG  139

Query  121  DLIFYGPEGTQSVALYLGKGQMLEVGDVVQVSPVRTNGMTPYLVRVLGTQPTPVQQAPVQ  180
            DLIFYGPEGTQSVALYLGKGQMLEVGDVVQVSPVRTNGMTPYLVRVLGTQPTPVQQAPVQ
Sbjct  140  DLIFYGPEGTQSVALYLGKGQMLEVGDVVQVSPVRTNGMTPYLVRVLGTQPTPVQQAPVQ  199

Query  181  PAPVQQAPVQQAPVQQAPVQQAPVQQAPVQQAPVQQAPVQPPPFGTARSR  230
            PAPVQQAPVQQAPVQQAPVQQAPVQQAPVQQAPVQQAPVQPPPFGTARSR
Sbjct  200  PAPVQQAPVQQAPVQQAPVQQAPVQQAPVQQAPVQQAPVQPPPFGTARSR  249


>gi|15608704|ref|NP_216082.1| inv protein [Mycobacterium tuberculosis H37Rv]
 gi|31792752|ref|NP_855245.1| inv protein [Mycobacterium bovis AF2122/97]
 gi|121637488|ref|YP_977711.1| putative inv protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
 48 more sequence titles
 gi|148661362|ref|YP_001282885.1| putative inv protein [Mycobacterium tuberculosis H37Ra]
 gi|167967382|ref|ZP_02549659.1| hypothetical inv protein [Mycobacterium tuberculosis H37Ra]
 gi|224989963|ref|YP_002644650.1| putative inv protein [Mycobacterium bovis BCG str. Tokyo 172]
 gi|289443020|ref|ZP_06432764.1| invasion-associated protein [Mycobacterium tuberculosis T46]
 gi|289447177|ref|ZP_06436921.1| invasion-associated protein [Mycobacterium tuberculosis CPHL_A]
 gi|289574250|ref|ZP_06454477.1| invasion-associated protein [Mycobacterium tuberculosis K85]
 gi|289750133|ref|ZP_06509511.1| invasion-associated protein [Mycobacterium tuberculosis T92]
 gi|289753655|ref|ZP_06513033.1| inv protein [Mycobacterium tuberculosis EAS054]
 gi|294996532|ref|ZP_06802223.1| invasion-associated protein [Mycobacterium tuberculosis 210]
 gi|297634135|ref|ZP_06951915.1| invasion-associated protein [Mycobacterium tuberculosis KZN 4207]
 gi|297731122|ref|ZP_06960240.1| invasion-associated protein [Mycobacterium tuberculosis KZN R506]
 gi|298525077|ref|ZP_07012486.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|306775754|ref|ZP_07414091.1| inv protein [Mycobacterium tuberculosis SUMu001]
 gi|306784311|ref|ZP_07422633.1| inv protein [Mycobacterium tuberculosis SUMu003]
 gi|306797397|ref|ZP_07435699.1| inv protein [Mycobacterium tuberculosis SUMu006]
 gi|306803277|ref|ZP_07439945.1| inv protein [Mycobacterium tuberculosis SUMu008]
 gi|306807857|ref|ZP_07444525.1| inv protein [Mycobacterium tuberculosis SUMu007]
 gi|306967675|ref|ZP_07480336.1| inv protein [Mycobacterium tuberculosis SUMu009]
 gi|306971861|ref|ZP_07484522.1| inv protein [Mycobacterium tuberculosis SUMu010]
 gi|307079580|ref|ZP_07488750.1| inv protein [Mycobacterium tuberculosis SUMu011]
 gi|307084145|ref|ZP_07493258.1| inv protein [Mycobacterium tuberculosis SUMu012]
 gi|313658454|ref|ZP_07815334.1| invasion-associated protein [Mycobacterium tuberculosis KZN V2475]
 gi|2117271|emb|CAB09071.1| Possible inv protein [Mycobacterium tuberculosis H37Rv]
 gi|31618342|emb|CAD96260.1| Possible inv protein [Mycobacterium bovis AF2122/97]
 gi|121493135|emb|CAL71606.1| Possible inv protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|148505514|gb|ABQ73323.1| putative inv protein [Mycobacterium tuberculosis H37Ra]
 gi|224773076|dbj|BAH25882.1| putative inv protein [Mycobacterium bovis BCG str. Tokyo 172]
 gi|289415939|gb|EFD13179.1| invasion-associated protein [Mycobacterium tuberculosis T46]
 gi|289420135|gb|EFD17336.1| invasion-associated protein [Mycobacterium tuberculosis CPHL_A]
 gi|289538681|gb|EFD43259.1| invasion-associated protein [Mycobacterium tuberculosis K85]
 gi|289690720|gb|EFD58149.1| invasion-associated protein [Mycobacterium tuberculosis T92]
 gi|289694242|gb|EFD61671.1| inv protein [Mycobacterium tuberculosis EAS054]
 gi|298494871|gb|EFI30165.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|308215844|gb|EFO75243.1| inv protein [Mycobacterium tuberculosis SUMu001]
 gi|308330973|gb|EFP19824.1| inv protein [Mycobacterium tuberculosis SUMu003]
 gi|308342285|gb|EFP31136.1| inv protein [Mycobacterium tuberculosis SUMu006]
 gi|308345779|gb|EFP34630.1| inv protein [Mycobacterium tuberculosis SUMu007]
 gi|308350079|gb|EFP38930.1| inv protein [Mycobacterium tuberculosis SUMu008]
 gi|308354684|gb|EFP43535.1| inv protein [Mycobacterium tuberculosis SUMu009]
 gi|308358717|gb|EFP47568.1| inv protein [Mycobacterium tuberculosis SUMu010]
 gi|308362599|gb|EFP51450.1| inv protein [Mycobacterium tuberculosis SUMu011]
 gi|308366224|gb|EFP55075.1| inv protein [Mycobacterium tuberculosis SUMu012]
 gi|323720015|gb|EGB29127.1| invasion-associated protein [Mycobacterium tuberculosis CDC1551A]
 gi|326903194|gb|EGE50127.1| invasion-associated protein [Mycobacterium tuberculosis W-148]
 gi|339294540|gb|AEJ46651.1| invasion-associated protein [Mycobacterium tuberculosis CCDC5079]
 gi|339298176|gb|AEJ50286.1| invasion-associated protein [Mycobacterium tuberculosis CCDC5180]
 gi|341601506|emb|CCC64179.1| possible inv protein [Mycobacterium bovis BCG str. Moreau RDJ]
 gi|344219401|gb|AEN00032.1| inv protein [Mycobacterium tuberculosis CTRI-2]
Length=230

 Score =  441 bits (1134),  Expect = 4e-122, Method: Compositional matrix adjust.
 Identities = 230/230 (100%), Positives = 230/230 (100%), Gaps = 0/230 (0%)

Query  1    MKRSMKSGSFAIGLAMMLAPMVAAPGLAAADPATRPVDYQQITDVVIARGLSQRGVPFSW  60
            MKRSMKSGSFAIGLAMMLAPMVAAPGLAAADPATRPVDYQQITDVVIARGLSQRGVPFSW
Sbjct  1    MKRSMKSGSFAIGLAMMLAPMVAAPGLAAADPATRPVDYQQITDVVIARGLSQRGVPFSW  60

Query  61   AGGGISGPTRGTGTGINTVGFDASGLIQYAYAGAGLKLPRSSGQMYKVGQKVLPQQARKG  120
            AGGGISGPTRGTGTGINTVGFDASGLIQYAYAGAGLKLPRSSGQMYKVGQKVLPQQARKG
Sbjct  61   AGGGISGPTRGTGTGINTVGFDASGLIQYAYAGAGLKLPRSSGQMYKVGQKVLPQQARKG  120

Query  121  DLIFYGPEGTQSVALYLGKGQMLEVGDVVQVSPVRTNGMTPYLVRVLGTQPTPVQQAPVQ  180
            DLIFYGPEGTQSVALYLGKGQMLEVGDVVQVSPVRTNGMTPYLVRVLGTQPTPVQQAPVQ
Sbjct  121  DLIFYGPEGTQSVALYLGKGQMLEVGDVVQVSPVRTNGMTPYLVRVLGTQPTPVQQAPVQ  180

Query  181  PAPVQQAPVQQAPVQQAPVQQAPVQQAPVQQAPVQQAPVQPPPFGTARSR  230
            PAPVQQAPVQQAPVQQAPVQQAPVQQAPVQQAPVQQAPVQPPPFGTARSR
Sbjct  181  PAPVQQAPVQQAPVQQAPVQQAPVQQAPVQQAPVQQAPVQPPPFGTARSR  230


>gi|339631637|ref|YP_004723279.1| inv protein [Mycobacterium africanum GM041182]
 gi|339330993|emb|CCC26665.1| putative inv protein [Mycobacterium africanum GM041182]
Length=230

 Score =  438 bits (1126),  Expect = 3e-121, Method: Compositional matrix adjust.
 Identities = 229/230 (99%), Positives = 229/230 (99%), Gaps = 0/230 (0%)

Query  1    MKRSMKSGSFAIGLAMMLAPMVAAPGLAAADPATRPVDYQQITDVVIARGLSQRGVPFSW  60
            MKRSMKSGSFAIGLAMMLAPMVAAPGLAAADPATRPVDYQQITDVVIARGLSQRGVPFSW
Sbjct  1    MKRSMKSGSFAIGLAMMLAPMVAAPGLAAADPATRPVDYQQITDVVIARGLSQRGVPFSW  60

Query  61   AGGGISGPTRGTGTGINTVGFDASGLIQYAYAGAGLKLPRSSGQMYKVGQKVLPQQARKG  120
            AGGGISGPTRGTGTGINTVGFDASGLIQYAYAGAGLKLPRSSGQMYKVGQKVLPQQARKG
Sbjct  61   AGGGISGPTRGTGTGINTVGFDASGLIQYAYAGAGLKLPRSSGQMYKVGQKVLPQQARKG  120

Query  121  DLIFYGPEGTQSVALYLGKGQMLEVGDVVQVSPVRTNGMTPYLVRVLGTQPTPVQQAPVQ  180
            DLIFYGPEGTQSVALYLGKGQMLEVGDVVQVSPVRTNGMTPYLVRVLG QPTPVQQAPVQ
Sbjct  121  DLIFYGPEGTQSVALYLGKGQMLEVGDVVQVSPVRTNGMTPYLVRVLGPQPTPVQQAPVQ  180

Query  181  PAPVQQAPVQQAPVQQAPVQQAPVQQAPVQQAPVQQAPVQPPPFGTARSR  230
            PAPVQQAPVQQAPVQQAPVQQAPVQQAPVQQAPVQQAPVQPPPFGTARSR
Sbjct  181  PAPVQQAPVQQAPVQQAPVQQAPVQQAPVQQAPVQQAPVQPPPFGTARSR  230


>gi|289761729|ref|ZP_06521107.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|289709235|gb|EFD73251.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
Length=249

 Score =  429 bits (1102),  Expect = 2e-118, Method: Compositional matrix adjust.
 Identities = 225/230 (98%), Positives = 225/230 (98%), Gaps = 5/230 (2%)

Query  1    MKRSMKSGSFAIGLAMMLAPMVAAPGLAAADPATRPVDYQQITDVVIARGLSQRGVPFSW  60
            MKRSMKSGSFAIGLAMMLAPMVAAPGLAAADPATRPVDYQQITDVVIARGLSQRGVPFSW
Sbjct  25   MKRSMKSGSFAIGLAMMLAPMVAAPGLAAADPATRPVDYQQITDVVIARGLSQRGVPFSW  84

Query  61   AGGGISGPTRGTGTGINTVGFDASGLIQYAYAGAGLKLPRSSGQMYKVGQKVLPQQARKG  120
            AGGGISGPTRGTGTGINTVGFDASGLIQYAYAGAGLKLPRSSGQMYKVGQKVLPQQARKG
Sbjct  85   AGGGISGPTRGTGTGINTVGFDASGLIQYAYAGAGLKLPRSSGQMYKVGQKVLPQQARKG  144

Query  121  DLIFYGPEGTQSVALYLGKGQMLEVGDVVQVSPVRTNGMTPYLVRVLGTQPTPVQQAPVQ  180
            DLIFYGPEGTQSVALYLGKGQMLEVGDVVQVSPVRTNGMTPYLVRVLGTQPTPVQQAPVQ
Sbjct  145  DLIFYGPEGTQSVALYLGKGQMLEVGDVVQVSPVRTNGMTPYLVRVLGTQPTPVQQAPVQ  204

Query  181  PAPVQQAPVQQAPVQQAPVQQAPVQQAPVQQAPVQQAPVQPPPFGTARSR  230
            P     APVQQAPVQQAPVQQAPVQQAPVQQAPVQQAPVQPPPFGTARSR
Sbjct  205  P-----APVQQAPVQQAPVQQAPVQQAPVQQAPVQQAPVQPPPFGTARSR  249


>gi|254550585|ref|ZP_05141032.1| invasion-associated protein [Mycobacterium tuberculosis '98-R604 
INH-RIF-EM']
 gi|306779578|ref|ZP_07417915.1| inv protein [Mycobacterium tuberculosis SUMu002]
 gi|306788679|ref|ZP_07427001.1| inv protein [Mycobacterium tuberculosis SUMu004]
 gi|306793016|ref|ZP_07431318.1| inv protein [Mycobacterium tuberculosis SUMu005]
 gi|308327510|gb|EFP16361.1| inv protein [Mycobacterium tuberculosis SUMu002]
 gi|308334795|gb|EFP23646.1| inv protein [Mycobacterium tuberculosis SUMu004]
 gi|308338583|gb|EFP27434.1| inv protein [Mycobacterium tuberculosis SUMu005]
Length=225

 Score =  427 bits (1098),  Expect = 7e-118, Method: Compositional matrix adjust.
 Identities = 225/230 (98%), Positives = 225/230 (98%), Gaps = 5/230 (2%)

Query  1    MKRSMKSGSFAIGLAMMLAPMVAAPGLAAADPATRPVDYQQITDVVIARGLSQRGVPFSW  60
            MKRSMKSGSFAIGLAMMLAPMVAAPGLAAADPATRPVDYQQITDVVIARGLSQRGVPFSW
Sbjct  1    MKRSMKSGSFAIGLAMMLAPMVAAPGLAAADPATRPVDYQQITDVVIARGLSQRGVPFSW  60

Query  61   AGGGISGPTRGTGTGINTVGFDASGLIQYAYAGAGLKLPRSSGQMYKVGQKVLPQQARKG  120
            AGGGISGPTRGTGTGINTVGFDASGLIQYAYAGAGLKLPRSSGQMYKVGQKVLPQQARKG
Sbjct  61   AGGGISGPTRGTGTGINTVGFDASGLIQYAYAGAGLKLPRSSGQMYKVGQKVLPQQARKG  120

Query  121  DLIFYGPEGTQSVALYLGKGQMLEVGDVVQVSPVRTNGMTPYLVRVLGTQPTPVQQAPVQ  180
            DLIFYGPEGTQSVALYLGKGQMLEVGDVVQVSPVRTNGMTPYLVRVLGTQPTPVQQAPVQ
Sbjct  121  DLIFYGPEGTQSVALYLGKGQMLEVGDVVQVSPVRTNGMTPYLVRVLGTQPTPVQQAPVQ  180

Query  181  PAPVQQAPVQQAPVQQAPVQQAPVQQAPVQQAPVQQAPVQPPPFGTARSR  230
            P     APVQQAPVQQAPVQQAPVQQAPVQQAPVQQAPVQPPPFGTARSR
Sbjct  181  P-----APVQQAPVQQAPVQQAPVQQAPVQQAPVQQAPVQPPPFGTARSR  225


>gi|340626587|ref|YP_004745039.1| putative inv protein [Mycobacterium canettii CIPT 140010059]
 gi|340004777|emb|CCC43921.1| putative inv protein [Mycobacterium canettii CIPT 140010059]
Length=219

 Score =  414 bits (1063),  Expect = 7e-114, Method: Compositional matrix adjust.
 Identities = 218/224 (98%), Positives = 218/224 (98%), Gaps = 5/224 (2%)

Query  1    MKRSMKSGSFAIGLAMMLAPMVAAPGLAAADPATRPVDYQQITDVVIARGLSQRGVPFSW  60
            MKRSMKSGSFAIGLAMMLAPMVAAPGLAAADPATRPVDYQQITDVVIARGLSQRGVPFSW
Sbjct  1    MKRSMKSGSFAIGLAMMLAPMVAAPGLAAADPATRPVDYQQITDVVIARGLSQRGVPFSW  60

Query  61   AGGGISGPTRGTGTGINTVGFDASGLIQYAYAGAGLKLPRSSGQMYKVGQKVLPQQARKG  120
            AGGGISGPTRGTGTGINTVGFDASGLIQYAYAGAGLKLPRSSGQMYKVGQKVLPQQARKG
Sbjct  61   AGGGISGPTRGTGTGINTVGFDASGLIQYAYAGAGLKLPRSSGQMYKVGQKVLPQQARKG  120

Query  121  DLIFYGPEGTQSVALYLGKGQMLEVGDVVQVSPVRTNGMTPYLVRVLGTQPTPVQQAPVQ  180
            DLIFYGPEGTQSVALYLGKGQMLEVGDVVQVSPVRTNGMTPYLVRVLGTQPTPVQQ    
Sbjct  121  DLIFYGPEGTQSVALYLGKGQMLEVGDVVQVSPVRTNGMTPYLVRVLGTQPTPVQQ----  176

Query  181  PAPVQQAPVQQAPVQQAPVQQAPVQQAPVQQAPVQQAPVQPPPF  224
             APVQQAPVQQAPVQQAPVQQ PVQQAPVQQAPVQQAPVQPPPF
Sbjct  177  -APVQQAPVQQAPVQQAPVQQTPVQQAPVQQAPVQQAPVQPPPF  219


>gi|289757681|ref|ZP_06517059.1| inv protein [Mycobacterium tuberculosis T85]
 gi|289713245|gb|EFD77257.1| inv protein [Mycobacterium tuberculosis T85]
Length=231

 Score =  372 bits (956),  Expect = 2e-101, Method: Compositional matrix adjust.
 Identities = 202/234 (87%), Positives = 208/234 (89%), Gaps = 7/234 (2%)

Query  1    MKRSMKSGSFAIGLAMMLAPMVAAPGLAAADPATRPVDYQQITDVVIARGLSQRGVPFSW  60
            MKRSMKSGSFAIGLAMMLAPMVAAPGLAAADPATRPVDYQQITDVVIARGLSQRGVPFSW
Sbjct  1    MKRSMKSGSFAIGLAMMLAPMVAAPGLAAADPATRPVDYQQITDVVIARGLSQRGVPFSW  60

Query  61   AGGGISGPTRGTGTGINTVGFDASGLIQYAYAGAGLKLPRSSGQMYKVGQKVLPQQARKG  120
            AGGGISGPTRGTGTGINTVGFDASGLIQYAYAGAGLKLPRSSGQMYKVGQKVLPQQARKG
Sbjct  61   AGGGISGPTRGTGTGINTVGFDASGLIQYAYAGAGLKLPRSSGQMYKVGQKVLPQQARKG  120

Query  121  DLIFYGPEGTQSVALYLGKGQMLEVGDVVQVSPVRTNGMTPYLVRVLGTQPTPVQQAPVQ  180
            DLIFYGPEGTQSVALYLGKGQMLEVGDVVQVSPVRTNGMTPYLVRVLGTQPTPVQQAPVQ
Sbjct  121  DLIFYGPEGTQSVALYLGKGQMLEVGDVVQVSPVRTNGMTPYLVRVLGTQPTPVQQAPVQ  180

Query  181  PAPVQQAPVQQAPVQ----QAPVQQAPVQQAPVQQAPVQQAPVQPPPFGTARSR  230
            PAP    P    P +    + P  +    +    + P +QAPVQPPPFGTARSR
Sbjct  181  PAP---GPASARPAKRPSNRRPSNRRRFNRRRSSKRPSRQAPVQPPPFGTARSR  231


>gi|289569603|ref|ZP_06449830.1| invasion-associated protein [Mycobacterium tuberculosis T17]
 gi|289543357|gb|EFD47005.1| invasion-associated protein [Mycobacterium tuberculosis T17]
Length=218

 Score =  369 bits (948),  Expect = 1e-100, Method: Compositional matrix adjust.
 Identities = 191/195 (98%), Positives = 191/195 (98%), Gaps = 1/195 (0%)

Query  1    MKRSMKSGSFAIGLAMMLAPMVAAPGLAAADPATRPVDYQQITDVVIARGLSQRGVPFSW  60
            MKRSMKSGSFAIGLAMMLAPMVAAPGLAAADPATRPVDYQQITDVVIARGLSQRGVPFSW
Sbjct  25   MKRSMKSGSFAIGLAMMLAPMVAAPGLAAADPATRPVDYQQITDVVIARGLSQRGVPFSW  84

Query  61   AGGGISGPTRGTGTGINTVGFDASGLIQYAYAGAGLKLPRSSGQMYKVGQKVLPQQARKG  120
            AGGGISGPTRGTGTGINTVGFDASGLIQYAYAGAGLKLPRSSGQMYKVGQKVLPQQARKG
Sbjct  85   AGGGISGPTRGTGTGINTVGFDASGLIQYAYAGAGLKLPRSSGQMYKVGQKVLPQQARKG  144

Query  121  DLIFYGPEGTQSVALYLGKGQMLEVGDVVQVSPVRTNGMTPYLVRVLGTQPTPVQQAPVQ  180
            DLIFYGPEGTQSVALYLGKGQMLEVGDVVQVSPVRTNGMTPYLVRVLGTQPTPVQQAPVQ
Sbjct  145  DLIFYGPEGTQSVALYLGKGQMLEVGDVVQVSPVRTNGMTPYLVRVLGTQPTPVQQAPVQ  204

Query  181  PAPVQQAPVQQAPVQ  195
            PAPV  A  QQAPVQ
Sbjct  205  PAPVSSAR-QQAPVQ  218


>gi|240167953|ref|ZP_04746612.1| inv protein [Mycobacterium kansasii ATCC 12478]
Length=277

 Score =  325 bits (834),  Expect = 2e-87, Method: Compositional matrix adjust.
 Identities = 176/237 (75%), Positives = 195/237 (83%), Gaps = 20/237 (8%)

Query  1    MKRSMKSGSFAIGLAMMLAPMVAAPGLAAADPATRPVDYQQITDVVIARGLSQRGVPFSW  60
            MKR     +FAIGLAMM++PM A PGLAAADP  R  DYQQ TDVVIARGLSQRGVPFSW
Sbjct  1    MKRIY---AFAIGLAMMVSPMAAVPGLAAADPGLRSTDYQQATDVVIARGLSQRGVPFSW  57

Query  61   AGGGISGPTRGTGTGINTVGFDASGLIQYAYAGAGLKLPRSSGQMYKVGQKVLPQQARKG  120
            AGGG++GPTRG G+GI TVGFDASGLIQYAYAGAG+KLPRSSG+MYKVGQKVLPQQARKG
Sbjct  58   AGGGVTGPTRGKGSGIYTVGFDASGLIQYAYAGAGIKLPRSSGEMYKVGQKVLPQQARKG  117

Query  121  DLIFYGPEGTQSVALYLGKGQMLEVGDVVQVSPVRTNGMTPYLVRVLGTQP---------  171
            DLIFYGPEGTQSVA+YLG GQMLEVGDVVQVSPVR++GMTPYLVR+LGTQ          
Sbjct  118  DLIFYGPEGTQSVAMYLGNGQMLEVGDVVQVSPVRSSGMTPYLVRILGTQTAPGQQLPPQ  177

Query  172  TPVQQAPVQ--------PAPVQQAPVQQAPVQQAPVQQAPVQQAPVQQAPVQQAPVQ  220
            TP+ QAPVQ         APVQQ P+ Q P+QQAP +QAP+QQ P QQAP+ QAP+Q
Sbjct  178  TPLPQAPVQQTPQTPLPQAPVQQTPLPQTPLQQAPARQAPLQQLPAQQAPLPQAPLQ  234


>gi|2791843|gb|AAB96954.1| unknown [Mycobacterium bovis BCG]
Length=259

 Score =  325 bits (833),  Expect = 3e-87, Method: Compositional matrix adjust.
 Identities = 164/164 (100%), Positives = 164/164 (100%), Gaps = 0/164 (0%)

Query  1    MKRSMKSGSFAIGLAMMLAPMVAAPGLAAADPATRPVDYQQITDVVIARGLSQRGVPFSW  60
            MKRSMKSGSFAIGLAMMLAPMVAAPGLAAADPATRPVDYQQITDVVIARGLSQRGVPFSW
Sbjct  1    MKRSMKSGSFAIGLAMMLAPMVAAPGLAAADPATRPVDYQQITDVVIARGLSQRGVPFSW  60

Query  61   AGGGISGPTRGTGTGINTVGFDASGLIQYAYAGAGLKLPRSSGQMYKVGQKVLPQQARKG  120
            AGGGISGPTRGTGTGINTVGFDASGLIQYAYAGAGLKLPRSSGQMYKVGQKVLPQQARKG
Sbjct  61   AGGGISGPTRGTGTGINTVGFDASGLIQYAYAGAGLKLPRSSGQMYKVGQKVLPQQARKG  120

Query  121  DLIFYGPEGTQSVALYLGKGQMLEVGDVVQVSPVRTNGMTPYLV  164
            DLIFYGPEGTQSVALYLGKGQMLEVGDVVQVSPVRTNGMTPYLV
Sbjct  121  DLIFYGPEGTQSVALYLGKGQMLEVGDVVQVSPVRTNGMTPYLV  164


>gi|254820217|ref|ZP_05225218.1| NlpC/P60 family protein [Mycobacterium intracellulare ATCC 13950]
Length=293

 Score =  313 bits (803),  Expect = 8e-84, Method: Compositional matrix adjust.
 Identities = 169/234 (73%), Positives = 188/234 (81%), Gaps = 18/234 (7%)

Query  1    MKRSMKSGSFAIGLAMMLAPMVAAPGLAAADPATRPVDYQQITDVVIARGLSQRGVPFSW  60
            MKR     + AIGLA++ APMV  P +A ADP  R +DYQQ TDVVIARGLSQRGVPFSW
Sbjct  1    MKRIY---ALAIGLALLGAPMVV-PTVATADPGARSMDYQQATDVVIARGLSQRGVPFSW  56

Query  61   AGGGISGPTRGTGTGINTVGFDASGLIQYAYAGAGLKLPRSSGQMYKVGQKVLPQQARKG  120
            AGGGI+GPTRGTGTG NTVGFDASGL+QYAYAGAG+KLPRSSG +Y+VGQK+LPQQARKG
Sbjct  57   AGGGINGPTRGTGTGANTVGFDASGLMQYAYAGAGVKLPRSSGAIYRVGQKILPQQARKG  116

Query  121  DLIFYGPEGTQSVALYLGKGQMLEVGDVVQVSPVRTNGMTPYLVRVLG------------  168
            DLIFYGP+GTQSVA+YLG  QMLEVGDVVQVSPVR NGMTPY+VR+LG            
Sbjct  117  DLIFYGPDGTQSVAMYLGNNQMLEVGDVVQVSPVRANGMTPYMVRILGASAPTPQAPAQQ  176

Query  169  --TQPTPVQQAPVQPAPVQQAPVQQAPVQQAPVQQAPVQQAPVQQAPVQQAPVQ  220
              TQ  P QQAP Q AP+QQAPVQQ+P  QAP QQ P QQAP+QQ P QQAP+Q
Sbjct  177  LPTQQGPAQQAPTQQAPLQQAPVQQSPFTQAPQQQLPTQQAPLQQVPTQQAPLQ  230


 Score = 63.2 bits (152),  Expect = 3e-08, Method: Compositional matrix adjust.
 Identities = 38/60 (64%), Positives = 43/60 (72%), Gaps = 0/60 (0%)

Query  169  TQPTPVQQAPVQPAPVQQAPVQQAPVQQAPVQQAPVQQAPVQQAPVQQAPVQPPPFGTAR  228
            TQ  P+QQ P Q AP QQ P Q+AP+Q AP QQAP+QQAPVQQ P QQAP+QP   G  R
Sbjct  234  TQQAPLQQVPTQQAPAQQVPTQRAPLQLAPTQQAPLQQAPVQQLPTQQAPLQPAGAGLTR  293


>gi|118464813|ref|YP_882390.1| NlpC/P60 family protein [Mycobacterium avium 104]
 gi|118166100|gb|ABK66997.1| NlpC/P60 family protein [Mycobacterium avium 104]
Length=289

 Score =  308 bits (789),  Expect = 4e-82, Method: Compositional matrix adjust.
 Identities = 167/222 (76%), Positives = 184/222 (83%), Gaps = 7/222 (3%)

Query  1    MKRSMKSGSFAIGLAMMLAPM--VAAPGLAAADPATRPVDYQQITDVVIARGLSQRGVPF  58
            MKR     +FAIGLA++ AP   +  P +A ADP  R +DYQQ TDVVIARGLSQRGVPF
Sbjct  1    MKRIY---AFAIGLALLGAPAAPMVVPAVATADPGVRAMDYQQATDVVIARGLSQRGVPF  57

Query  59   SWAGGGISGPTRGTGTGINTVGFDASGLIQYAYAGAGLKLPRSSGQMYKVGQKVLPQQAR  118
            SWAGGGI+GPTRGTGTG NTVGFDASGL+QYAYAGAG+KLPRSSG MY+VGQK+LPQQAR
Sbjct  58   SWAGGGINGPTRGTGTGANTVGFDASGLMQYAYAGAGIKLPRSSGAMYRVGQKILPQQAR  117

Query  119  KGDLIFYGPEGTQSVALYLGKGQMLEVGDVVQVSPVRTNGMTPYLVRVLGTQPTPVQQAP  178
            KGDLIFYGPEGTQSVA+YLG  QMLEVGDVVQVSPVRT GM PY+VRVLGT   P QQ P
Sbjct  118  KGDLIFYGPEGTQSVAMYLGNNQMLEVGDVVQVSPVRTAGMAPYMVRVLGTT-APTQQVP  176

Query  179  VQPAPVQQAPVQQAPVQQAPVQQAPVQQAPVQQAPVQQAPVQ  220
             Q AP+QQ P QQAP+QQ P QQAP+QQ P QQ P QQAP+Q
Sbjct  177  QQ-APLQQTPAQQAPLQQTPGQQAPLQQTPGQQLPTQQAPLQ  217


>gi|254775657|ref|ZP_05217173.1| NlpC/P60 family protein [Mycobacterium avium subsp. avium ATCC 
25291]
Length=279

 Score =  308 bits (788),  Expect = 5e-82, Method: Compositional matrix adjust.
 Identities = 168/234 (72%), Positives = 184/234 (79%), Gaps = 18/234 (7%)

Query  1    MKRSMKSGSFAIGLAMMLAPM--VAAPGLAAADPATRPVDYQQITDVVIARGLSQRGVPF  58
            MKR     +FAIGLA++ AP   +  P +A ADP  R +DYQQ TDVVIARGLSQRGVPF
Sbjct  1    MKRIY---AFAIGLALLGAPAAPMVVPAVATADPGVRAMDYQQATDVVIARGLSQRGVPF  57

Query  59   SWAGGGISGPTRGTGTGINTVGFDASGLIQYAYAGAGLKLPRSSGQMYKVGQKVLPQQAR  118
            SWAGGGI+GPTRGTGTG NTVGFDASGL+QYAYAGAG+KLPRSSG MY+VGQK+LPQQAR
Sbjct  58   SWAGGGINGPTRGTGTGANTVGFDASGLMQYAYAGAGIKLPRSSGAMYRVGQKILPQQAR  117

Query  119  KGDLIFYGPEGTQSVALYLGKGQMLEVGDVVQVSPVRTNGMTPYLVRVLGT---------  169
            KGDLIFYGPEGTQSVA+YLG  QMLEVGDVVQVSPVRT GM PY+VRVLGT         
Sbjct  118  KGDLIFYGPEGTQSVAMYLGNNQMLEVGDVVQVSPVRTAGMAPYMVRVLGTTAPTQQVPQ  177

Query  170  ----QPTPVQQAPVQPAPVQQAPVQQAPVQQAPVQQAPVQQAPVQQAPVQQAPV  219
                Q TP QQAP+Q  P QQAP+QQ P QQAP QQAP+QQ P QQ P QQ P 
Sbjct  178  QAPLQQTPAQQAPLQQTPGQQAPLQQTPGQQAPTQQAPLQQVPTQQVPGQQLPT  231


>gi|342860851|ref|ZP_08717501.1| NlpC/P60 family protein [Mycobacterium colombiense CECT 3035]
 gi|342131875|gb|EGT85132.1| NlpC/P60 family protein [Mycobacterium colombiense CECT 3035]
Length=258

 Score =  308 bits (788),  Expect = 5e-82, Method: Compositional matrix adjust.
 Identities = 172/263 (66%), Positives = 193/263 (74%), Gaps = 40/263 (15%)

Query  1    MKRSMKSGSFAIGLAMMLAPMVAAPGLAAADPATRPVDYQQITDVVIARGLSQRGVPFSW  60
            MKR     +FAIGLA++ APMV  P +A ADP  R +DYQQ TDVVIARGLSQRGVPFSW
Sbjct  1    MKRIY---AFAIGLALLGAPMVV-PTIATADPGARSMDYQQATDVVIARGLSQRGVPFSW  56

Query  61   AGGGISGPTRGTGTGINTVGFDASGLIQYAYAGAGLKLPRSSGQMYKVGQKVLPQQARKG  120
            AGGGI+GPTRGTGTGINTVGFDASGL+QYAYAGAG+KLPRSSG +Y+VGQK++PQQARKG
Sbjct  57   AGGGINGPTRGTGTGINTVGFDASGLMQYAYAGAGIKLPRSSGAIYRVGQKIVPQQARKG  116

Query  121  DLIFYGPEGTQSVALYLGKGQMLEVGDVVQVSPVRTNGMTPYLVRVLGT-----------  169
            DLIFYGPEGTQSVA+YLG  QMLEVGDVVQVSPVRT+GMTPY+VRVLG            
Sbjct  117  DLIFYGPEGTQSVAMYLGNNQMLEVGDVVQVSPVRTSGMTPYMVRVLGAPLQQAPLQQAP  176

Query  170  ------------------------QPTPVQQAPVQPAPVQQAPVQQAPVQQAPVQQAPVQ  205
                                    Q +P QQ P Q  P QQAP+QQ P QQAP+QQ+P Q
Sbjct  177  AQQAPQQLPTQQTPQQLPTQQAPLQQSPYQQTP-QQLPAQQAPLQQVPTQQAPLQQSPFQ  235

Query  206  QAPVQQAPVQQAPVQPPPFGTAR  228
            QAPVQQ P QQ+P+QP   G  R
Sbjct  236  QAPVQQLPTQQSPLQPTGAGIGR  258


>gi|41407370|ref|NP_960206.1| hypothetical protein MAP1272c [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|41395722|gb|AAS03589.1| hypothetical protein MAP_1272c [Mycobacterium avium subsp. paratuberculosis 
K-10]
Length=316

 Score =  307 bits (787),  Expect = 6e-82, Method: Compositional matrix adjust.
 Identities = 166/215 (78%), Positives = 182/215 (85%), Gaps = 6/215 (2%)

Query  9    SFAIGLAMM---LAPMVAAPGLAAADPATRPVDYQQITDVVIARGLSQRGVPFSWAGGGI  65
            +FAIGLA++    APMV  P +A ADP  R +DYQQ TDVVIARGLSQRGVPFSWAGGGI
Sbjct  43   AFAIGLALLGAPAAPMVVPP-VATADPGVRAMDYQQATDVVIARGLSQRGVPFSWAGGGI  101

Query  66   SGPTRGTGTGINTVGFDASGLIQYAYAGAGLKLPRSSGQMYKVGQKVLPQQARKGDLIFY  125
            +GPTRGTGTG NTVGFDASGL+QYAYAGAG+KLPRSSG MY+VGQK+LPQQARKGDLIFY
Sbjct  102  NGPTRGTGTGANTVGFDASGLMQYAYAGAGIKLPRSSGAMYRVGQKILPQQARKGDLIFY  161

Query  126  GPEGTQSVALYLGKGQMLEVGDVVQVSPVRTNGMTPYLVRVLGTQPTPVQQAPVQPAPVQ  185
            GPEGTQSVA+YLG  QMLEVGDVVQVSPVRT GM PY+VRVLGT   P QQ P Q AP+Q
Sbjct  162  GPEGTQSVAMYLGNNQMLEVGDVVQVSPVRTAGMAPYMVRVLGTT-APTQQVPQQ-APLQ  219

Query  186  QAPVQQAPVQQAPVQQAPVQQAPVQQAPVQQAPVQ  220
            Q P QQAP+QQ P QQAP+QQ P QQ P QQAP+Q
Sbjct  220  QTPAQQAPLQQTPGQQAPLQQTPGQQLPTQQAPLQ  254


>gi|118617207|ref|YP_905539.1| inv protein [Mycobacterium ulcerans Agy99]
 gi|183982394|ref|YP_001850685.1| inv protein [Mycobacterium marinum M]
 gi|118569317|gb|ABL04068.1| inv protein [Mycobacterium ulcerans Agy99]
 gi|183175720|gb|ACC40830.1| inv protein [Mycobacterium marinum M]
Length=259

 Score =  300 bits (767),  Expect = 1e-79, Method: Compositional matrix adjust.
 Identities = 170/222 (77%), Positives = 189/222 (86%), Gaps = 3/222 (1%)

Query  1    MKRSMKSGSFAIGLAMMLAPMVAAPGLAAADPATRPVDYQQITDVVIARGLSQRGVPFSW  60
            MKR     +FAIGL MM APM AAPG+AAADP+ RPVDYQQ TDVV+ARGLSQRGVPFSW
Sbjct  1    MKRIY---AFAIGLVMMAAPMAAAPGIAAADPSVRPVDYQQATDVVVARGLSQRGVPFSW  57

Query  61   AGGGISGPTRGTGTGINTVGFDASGLIQYAYAGAGLKLPRSSGQMYKVGQKVLPQQARKG  120
            AGGGI+GP+RG GTGI TVGFDASGLIQYAYAGAG+KLPRSSG+MYKVGQKVLPQQARK 
Sbjct  58   AGGGITGPSRGKGTGIYTVGFDASGLIQYAYAGAGIKLPRSSGEMYKVGQKVLPQQARKA  117

Query  121  DLIFYGPEGTQSVALYLGKGQMLEVGDVVQVSPVRTNGMTPYLVRVLGTQPTPVQQAPVQ  180
            DL+FYGPEGTQSVA+YLG GQMLEVGDVVQVSPVRT  M PYLVR++G    P+QQ P+ 
Sbjct  118  DLLFYGPEGTQSVAMYLGNGQMLEVGDVVQVSPVRTTDMMPYLVRIIGASQAPLQQTPLP  177

Query  181  PAPVQQAPVQQAPVQQAPVQQAPVQQAPVQQAPVQQAPVQPP  222
              P++QAP+QQ P QQ P QQAP+QQAP QQ P QQAP+Q P
Sbjct  178  QTPLRQAPLQQVPTQQVPTQQAPLQQAPAQQLPTQQAPLQAP  219


>gi|336457923|gb|EGO36914.1| cell wall-associated hydrolase, invasion-associated protein [Mycobacterium 
avium subsp. paratuberculosis S397]
Length=264

 Score =  298 bits (763),  Expect = 4e-79, Method: Compositional matrix adjust.
 Identities = 172/268 (65%), Positives = 191/268 (72%), Gaps = 44/268 (16%)

Query  1    MKRSMKSGSFAIGLAMM---LAPMVAAPGLAAADPATRPVDYQQITDVVIARGLSQRGVP  57
            MKR     +FAIGLA++    APMV  P +A ADP  R +DYQQ TDVVIARGLSQRGVP
Sbjct  1    MKRIY---AFAIGLALLGAPAAPMVVPP-VATADPGVRAMDYQQATDVVIARGLSQRGVP  56

Query  58   FSWAGGGISGPTRGTGTGINTVGFDASGLIQYAYAGAGLKLPRSSGQMYKVGQKVLPQQA  117
            FSWAGGGI+GPTRGTGTG NTVGFDASGL+QYAYAGAG+KLPRSSG MY+VGQK+LPQQA
Sbjct  57   FSWAGGGINGPTRGTGTGANTVGFDASGLMQYAYAGAGIKLPRSSGAMYRVGQKILPQQA  116

Query  118  RKGDLIFYGPEGTQSVALYLGKGQMLEVGDVVQVSPVRTNGMTPYLVRVLGT--------  169
            RKGDLIFYGPEGTQSVA+YLG  QMLEVGDVVQVSPVRT GM PY+VRVLGT        
Sbjct  117  RKGDLIFYGPEGTQSVAMYLGNNQMLEVGDVVQVSPVRTAGMAPYMVRVLGTTAPTQQVP  176

Query  170  QPTPVQQAPVQPAPVQQAPVQQAP-----------------------------VQQAPVQ  200
            Q  P+QQ P Q  P QQAP+QQ P                              QQAP+Q
Sbjct  177  QQAPLQQTPGQQLPTQQAPLQQVPGQQVPGQQVPGQQLPTQQAPQQAPLQLAPTQQAPLQ  236

Query  201  QAPVQQAPVQQAPVQQAPVQPPPFGTAR  228
            Q P QQ+P+QQ PVQQ+P+QP   G  R
Sbjct  237  QLPTQQSPLQQLPVQQSPLQPAGAGLTR  264


>gi|15827616|ref|NP_301879.1| p60-family protein [Mycobacterium leprae TN]
 gi|221230093|ref|YP_002503509.1| putative secreted p60-family protein [Mycobacterium leprae Br4923]
 gi|13093167|emb|CAC31595.1| putative secreted p60-family protein [Mycobacterium leprae]
 gi|219933200|emb|CAR71309.1| putative secreted p60-family protein [Mycobacterium leprae Br4923]
Length=212

 Score =  283 bits (724),  Expect = 1e-74, Method: Compositional matrix adjust.
 Identities = 147/220 (67%), Positives = 168/220 (77%), Gaps = 13/220 (5%)

Query  9    SFAIGLAMMLAPMVAAPGLAAADPATRPVDYQQITDVVIARGLSQRGVPFSWAGGGISGP  68
            +F  GLAM++  ++    LA AD  TR  DYQQ  D V+ R L+QRGVPFSWAGGG+SGP
Sbjct  6    TFVTGLAMLVTSILTC-SLAYADSGTRTADYQQTIDTVVQRALAQRGVPFSWAGGGVSGP  64

Query  69   TRGTGTGINTVGFDASGLIQYAYAGAGLKLPRSSGQMYKVGQKVLPQQARKGDLIFYGPE  128
            TRGTGTG NTVGFDASGLIQYAYAGAGLKLPRSSG+MYKVGQKVLP+ AR+GDLIFYGPE
Sbjct  65   TRGTGTGSNTVGFDASGLIQYAYAGAGLKLPRSSGEMYKVGQKVLPRHARRGDLIFYGPE  124

Query  129  GTQSVALYLGKGQMLEVGDVVQVSPVRTNGMTPYLVRVLGTQPTPVQQAPVQPAPVQQAP  188
            GT+SV LYLG  +M+EVG+VVQVSPVR+NGM PYLVRVLGTQPT V QAP+Q  P   AP
Sbjct  125  GTESVTLYLGDEKMVEVGEVVQVSPVRSNGMAPYLVRVLGTQPTSVPQAPLQQVPTLPAP  184

Query  189  VQQAPVQQAPVQQAPVQQAPVQQAPVQQAPVQPPPFGTAR  228
             QQ P  +AP+Q  P+           Q PV+P P  TAR
Sbjct  185  -QQTPTHRAPLQHMPL-----------QVPVRPVPVSTAR  212


>gi|296164445|ref|ZP_06847019.1| NLP/P60 family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295900227|gb|EFG79659.1| NLP/P60 family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=311

 Score =  283 bits (723),  Expect = 2e-74, Method: Compositional matrix adjust.
 Identities = 176/276 (64%), Positives = 193/276 (70%), Gaps = 61/276 (22%)

Query  1    MKRSMKSGSFAIGLAMMLAPMVAAPGLAAADPATRPVDYQQITDVVIARGLSQRGVPFSW  60
            MKR     +FAIGLAM+ APM+AA  +A+ADP TRP+DYQQ TDVVIARGLSQRGVPFSW
Sbjct  1    MKRIY---AFAIGLAMLAAPMIAA-AIASADPGTRPMDYQQATDVVIARGLSQRGVPFSW  56

Query  61   AGGGISGPTRGTGTGINTVGFDASGLIQYAYAGAGLKLPRSSGQMYKVGQKVLPQQARKG  120
            AGGGI+GPTRGTGTGINTVGFDASGL+QYAYAGAG+KLPRSSG +YKVGQKVLPQQA KG
Sbjct  57   AGGGINGPTRGTGTGINTVGFDASGLMQYAYAGAGIKLPRSSGAIYKVGQKVLPQQAHKG  116

Query  121  DLIFYGPEGTQSVALYLGKGQMLEVGDVVQVSPVRTNGMTPYLVRVLGTQPTP-------  173
            D+IFYGPEGTQSVA+YLG  QMLEVGDVVQVSPVR NGM PYLVRVLG    P       
Sbjct  117  DMIFYGPEGTQSVAMYLGNNQMLEVGDVVQVSPVRANGMAPYLVRVLGVPSAPVQALPQQ  176

Query  174  ---------------------VQQAPVQPAPVQQAPVQ----------------------  190
                                 VQQ P Q AP QQAP+Q                      
Sbjct  177  APTQAPAQQAPAQQAPLQQAPVQQLPTQQAPTQQAPLQQAPVQQLPPQQAPAQQAPVQQA  236

Query  191  -------QAPVQQAPVQQAPVQQAPVQQAPVQQAPV  219
                   QAP+QQAPVQQAPVQQ P +QAP+QQAP+
Sbjct  237  PLQQQSAQAPLQQAPVQQAPVQQVPTRQAPLQQAPL  272


 Score = 57.4 bits (137),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 38/66 (58%), Positives = 43/66 (66%), Gaps = 10/66 (15%)

Query  173  PVQQAPVQPAPVQQAPVQQAPVQQAPV----------QQAPVQQAPVQQAPVQQAPVQPP  222
            P+QQAPVQ APVQQ P +QAP+QQAP+          QQAP QQAPVQ  P QQ+P  P 
Sbjct  246  PLQQAPVQQAPVQQVPTRQAPLQQAPLPRATLPQLPTQQAPAQQAPVQLVPAQQSPFLPA  305

Query  223  PFGTAR  228
              GT R
Sbjct  306  APGTTR  311


 Score = 38.5 bits (88),  Expect = 0.86, Method: Compositional matrix adjust.
 Identities = 26/49 (54%), Positives = 30/49 (62%), Gaps = 10/49 (20%)

Query  170  QPTPVQQAPVQPAPVQQAPV----------QQAPVQQAPVQQAPVQQAP  208
            Q  PVQQ P + AP+QQAP+          QQAP QQAPVQ  P QQ+P
Sbjct  253  QQAPVQQVPTRQAPLQQAPLPRATLPQLPTQQAPAQQAPVQLVPAQQSP  301


>gi|466806|gb|AAA17082.1| inv [Mycobacterium leprae]
Length=246

 Score =  280 bits (715),  Expect = 2e-73, Method: Compositional matrix adjust.
 Identities = 140/197 (72%), Positives = 160/197 (82%), Gaps = 2/197 (1%)

Query  9    SFAIGLAMMLAPMVAAPGLAAADPATRPVDYQQITDVVIARGLSQRGVPFSWAGGGISGP  68
            +F  GLAM++  ++    LA AD  TR  DYQQ  D V+ R L+QRGVPFSWAGGG+SGP
Sbjct  45   TFVTGLAMLVTSILTC-SLAYADSGTRTADYQQTIDTVVQRALAQRGVPFSWAGGGVSGP  103

Query  69   TRGTGTGINTVGFDASGLIQYAYAGAGLKLPRSSGQMYKVGQKVLPQQARKGDLIFYGPE  128
            TRGTGTG NTVGFDASGLIQYAYAGAGLKLPRSSG+MYKVGQKVLP+ AR+GDLIFYGPE
Sbjct  104  TRGTGTGSNTVGFDASGLIQYAYAGAGLKLPRSSGEMYKVGQKVLPRHARRGDLIFYGPE  163

Query  129  GTQSVALYLGKGQMLEVGDVVQVSPVRTNGMTPYLVRVLGTQPTPVQQAPVQPAPVQQAP  188
            GT+SV LYLG  +M+EVG+VVQVSPVR+NGM PYLVRVLGTQPT V QAP+Q  P   AP
Sbjct  164  GTESVTLYLGDEKMVEVGEVVQVSPVRSNGMAPYLVRVLGTQPTSVPQAPLQQVPTLPAP  223

Query  189  VQQAPVQQAPVQQAPVQ  205
             QQ P  +AP+Q  P+Q
Sbjct  224  -QQTPTHRAPLQHMPLQ  239


>gi|293651838|pdb|3GT2|A Chain A, Crystal Structure Of The P60 Domain From M. Avium Paratuberculosis 
Antigen Map1272c
Length=142

 Score =  240 bits (612),  Expect = 1e-61, Method: Compositional matrix adjust.
 Identities = 120/142 (85%), Positives = 124/142 (88%), Gaps = 0/142 (0%)

Query  28   AAADPATRPVDYQQITDVVIARGLSQRGVPFSWAGGGISGPTRGTGTGINTVGFDASGLI  87
            A ADP  R  DYQQ TDVVIARGLSQRGVPFSWAGGGI+GPTRGTGTG NTVGFDASGL 
Sbjct  1    ATADPGVRAXDYQQATDVVIARGLSQRGVPFSWAGGGINGPTRGTGTGANTVGFDASGLX  60

Query  88   QYAYAGAGLKLPRSSGQMYKVGQKVLPQQARKGDLIFYGPEGTQSVALYLGKGQMLEVGD  147
            QYAYAGAG+KLPRSSG  Y+VGQK+LPQQARKGDLIFYGPEGTQSVA YLG  Q LEVGD
Sbjct  61   QYAYAGAGIKLPRSSGAXYRVGQKILPQQARKGDLIFYGPEGTQSVAXYLGNNQXLEVGD  120

Query  148  VVQVSPVRTNGMTPYLVRVLGT  169
            VVQVSPVRT G  PY VRVLGT
Sbjct  121  VVQVSPVRTAGXAPYXVRVLGT  142


>gi|118468647|ref|YP_887781.1| inv protein [Mycobacterium smegmatis str. MC2 155]
 gi|118169934|gb|ABK70830.1| possible inv protein [Mycobacterium smegmatis str. MC2 155]
Length=220

 Score =  178 bits (452),  Expect = 4e-43, Method: Compositional matrix adjust.
 Identities = 107/222 (49%), Positives = 132/222 (60%), Gaps = 58/222 (26%)

Query  1    MKRSMKSGSFAIGLAMMLAPMVAAPGLAAADPATRPVDYQQITDVVIARGLSQRGVPFSW  60
            M+R+    +  + LA+  A ++  PG+AAA P  RP   Q+  ++VIAR LSQRGVPF++
Sbjct  1    MRRAY---AVLVSLAVSTAVLLGIPGIAAAAPYDRPAGNQRFVEIVIARALSQRGVPFTY  57

Query  61   AGGGISGPTRG------------TGT---------------GINT---------------  78
             GG ++GPTRG            TG                G+NT               
Sbjct  58   GGGDVNGPTRGVPREIPPAAAVPTGAYPGLAPAATPEALTPGLNTPAVTPGLSAPAITPG  117

Query  79   ------------VGFDASGLIQYAYAGAGLKLPRSSGQMYKVGQKVLPQQARKGDLIFYG  126
                        VGFDASGLI YA+AGAG+K+PRSSG+ YKVGQKVLP QA  GDLIFYG
Sbjct  118  LVAPVAAPAPDVVGFDASGLIVYAFAGAGVKMPRSSGEQYKVGQKVLPSQALPGDLIFYG  177

Query  127  PEGTQSVALYLGKGQMLEVGDV-VQVSPVRTNGMTPYLVRVL  167
            PEGTQSVAL++G GQM+E  D  VQVSPVRT  MTPYLVR++
Sbjct  178  PEGTQSVALFVGNGQMVETTDSGVQVSPVRTENMTPYLVRII  219


>gi|120403952|ref|YP_953781.1| NLP/P60 protein [Mycobacterium vanbaalenii PYR-1]
 gi|119956770|gb|ABM13775.1| NLP/P60 protein [Mycobacterium vanbaalenii PYR-1]
Length=208

 Score =  176 bits (445),  Expect = 3e-42, Method: Compositional matrix adjust.
 Identities = 106/206 (52%), Positives = 123/206 (60%), Gaps = 53/206 (25%)

Query  10   FAIGLAMMLAPMVAAPGLAAADPATRPVDYQQITDVVIARGLSQRGVPFSWAGGGISGPT  69
            F IGLA++LA     PGLA A PA R    Q+  + VIAR LSQRGVPF++ GGG SGP+
Sbjct  7    FVIGLALLLA----TPGLATAQPA-RSATNQKAVEAVIARALSQRGVPFAYGGGGASGPS  61

Query  70   RGT-----------------------GTGINT------------------------VGFD  82
            +GT                         G+N                         VGFD
Sbjct  62   KGTVAVPEAEPALPDQAEVDAQSLDLAPGLNVPSVTPNVAAPIPAPTPAPAPRIEVVGFD  121

Query  83   ASGLIQYAYAGAGLKLPRSSGQMYKVGQKVLPQQARKGDLIFYGPEGTQSVALYLGKGQM  142
            ASGL+ YAYAG G+KLPRSSG+MYKVGQKVLP QA  GDLIFYGPEGTQSVAL++G GQM
Sbjct  122  ASGLMVYAYAGVGVKLPRSSGEMYKVGQKVLPAQALPGDLIFYGPEGTQSVALFIGNGQM  181

Query  143  LEVGDV-VQVSPVRTNGMTPYLVRVL  167
            +E  D  V VS VRT  MTPYLVR++
Sbjct  182  VETTDAGVAVSSVRTKDMTPYLVRII  207


>gi|145223840|ref|YP_001134518.1| NLP/P60 protein [Mycobacterium gilvum PYR-GCK]
 gi|145216326|gb|ABP45730.1| NLP/P60 protein [Mycobacterium gilvum PYR-GCK]
Length=214

 Score =  171 bits (433),  Expect = 8e-41, Method: Compositional matrix adjust.
 Identities = 102/208 (50%), Positives = 125/208 (61%), Gaps = 51/208 (24%)

Query  10   FAIGLAMMLAP----MVAAPGLAAADPATRPVDYQQITDVVIARGLSQRGVPFSWAGGGI  65
            F I LA++LA     ++A PG+A A P  R    Q+  + VIAR LSQRGVPF++ GGG 
Sbjct  7    FVIALALVLATPGVAVLATPGVATALPG-RSATNQKAVEAVIARALSQRGVPFAYGGGGA  65

Query  66   SGPTRGT-----------------------GTGIN----------------------TVG  80
            SGP++GT                         G+N                       VG
Sbjct  66   SGPSKGTVALPEAAPAVPDQAEIDAQALTESPGLNLPGVTPNVAVPTLPAPPAPRVEVVG  125

Query  81   FDASGLIQYAYAGAGLKLPRSSGQMYKVGQKVLPQQARKGDLIFYGPEGTQSVALYLGKG  140
            FDASGL+ YA++G G+KLPRSSG+MYKVGQKV P  A  GDLIFYGPEGTQSVAL++G G
Sbjct  126  FDASGLMVYAFSGVGVKLPRSSGEMYKVGQKVAPALAMPGDLIFYGPEGTQSVALFIGNG  185

Query  141  QMLEVGDV-VQVSPVRTNGMTPYLVRVL  167
            QM+E  D  V VSPVRTNGM+PYLVR++
Sbjct  186  QMVETTDTGVAVSPVRTNGMSPYLVRII  213


>gi|315444169|ref|YP_004077048.1| cell wall-associated hydrolase, invasion-associated protein [Mycobacterium 
sp. Spyr1]
 gi|315262472|gb|ADT99213.1| cell wall-associated hydrolase, invasion-associated protein [Mycobacterium 
sp. Spyr1]
Length=206

 Score =  169 bits (429),  Expect = 2e-40, Method: Compositional matrix adjust.
 Identities = 101/204 (50%), Positives = 122/204 (60%), Gaps = 51/204 (25%)

Query  10   FAIGLAMMLAPMVAAPGLAAADPATRPVDYQQITDVVIARGLSQRGVPFSWAGGGISGPT  69
            F I LA++LA     PG+A A P  R    Q+  + VIAR LSQRGVPF++ GGG SGP+
Sbjct  7    FVIALALVLA----TPGVATALPG-RSATNQKAVEAVIARALSQRGVPFAYGGGGASGPS  61

Query  70   RGT-----------------------GTGIN----------------------TVGFDAS  84
            +GT                         G+N                       VGFDAS
Sbjct  62   KGTVALPEAAPAVPDQAEIDAQALTESPGLNLPGVTPNVAVPTLPAPPAPRVEVVGFDAS  121

Query  85   GLIQYAYAGAGLKLPRSSGQMYKVGQKVLPQQARKGDLIFYGPEGTQSVALYLGKGQMLE  144
            GL+ YA++G G+KLPRSSG+MYKVGQKV P  A  GDLIFYGPEGTQSVAL++G GQM+E
Sbjct  122  GLMVYAFSGVGVKLPRSSGEMYKVGQKVAPALAMPGDLIFYGPEGTQSVALFIGNGQMVE  181

Query  145  VGDV-VQVSPVRTNGMTPYLVRVL  167
              D  V VSPVRTNGM+PYLVR++
Sbjct  182  TTDTGVAVSPVRTNGMSPYLVRII  205


>gi|169629560|ref|YP_001703209.1| hypothetical protein MAB_2474 [Mycobacterium abscessus ATCC 19977]
 gi|169241527|emb|CAM62555.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=184

 Score =  164 bits (415),  Expect = 9e-39, Method: Compositional matrix adjust.
 Identities = 96/186 (52%), Positives = 116/186 (63%), Gaps = 26/186 (13%)

Query  5    MKSGSFAIGLAMMLAPMVAAPGLAAADPATRPVDYQQITDVVIARGLSQRGVPFSWAGGG  64
            MKS ++A+ L + L  ++  PGLA+AD    PVD QQ  + VIARGLSQRGVPF++ GG 
Sbjct  1    MKS-TYAVLLGIAL--LLVTPGLASADVPRSPVDRQQAINAVIARGLSQRGVPFTYGGGN  57

Query  65   ISGPTRGTGTG-----INTV-----------------GFDASGLIQYAYAGAGLKLPRSS  102
              GPT  T T       NT                  GFDASGL+ Y+YA AG+KLPR S
Sbjct  58   TDGPTTSTDTAPAAPEANTSLLGLIPAPVAAPTPKVPGFDASGLMVYSYAAAGIKLPRRS  117

Query  103  GQMYKVGQKVLPQQARKGDLIFYGPEGTQSVALYLGKGQMLEVGD-VVQVSPVRTNGMTP  161
            G  Y VG+K+LP QA  GDLIFYGP G+QSV ++LG   MLE  +  VQVS VR N M P
Sbjct  118  GDQYNVGRKILPAQALPGDLIFYGPNGSQSVTMFLGNNLMLEASEPAVQVSQVRFNDMAP  177

Query  162  YLVRVL  167
            YLVRV+
Sbjct  178  YLVRVI  183


>gi|8439559|gb|AAF74990.1|AF143397_1 putative invasin 996A009 [Mycobacterium avium]
Length=111

 Score =  163 bits (412),  Expect = 2e-38, Method: Compositional matrix adjust.
 Identities = 86/115 (75%), Positives = 96/115 (84%), Gaps = 7/115 (6%)

Query  1    MKRSMKSGSFAIGLAMM---LAPMVAAPGLAAADPATRPVDYQQITDVVIARGLSQRGVP  57
            MKR     +FAIGLA++    APMV  P +A ADP  R +DYQQ TDVVIARGLSQRGVP
Sbjct  1    MKRIY---AFAIGLALLGAPAAPMVV-PAVATADPGVRAMDYQQATDVVIARGLSQRGVP  56

Query  58   FSWAGGGISGPTRGTGTGINTVGFDASGLIQYAYAGAGLKLPRSSGQMYKVGQKV  112
            FSWAGGGI+GPTRGTGTG NTVGFDASGL+QYAYAGAG+KLPRSSG MY+VGQK+
Sbjct  57   FSWAGGGINGPTRGTGTGANTVGFDASGLMQYAYAGAGIKLPRSSGAMYRVGQKI  111


>gi|108799418|ref|YP_639615.1| NLP/P60 [Mycobacterium sp. MCS]
 gi|119868531|ref|YP_938483.1| NLP/P60 protein [Mycobacterium sp. KMS]
 gi|126435072|ref|YP_001070763.1| NLP/P60 protein [Mycobacterium sp. JLS]
 gi|108769837|gb|ABG08559.1| NLP/P60 [Mycobacterium sp. MCS]
 gi|119694620|gb|ABL91693.1| NLP/P60 protein [Mycobacterium sp. KMS]
 gi|126234872|gb|ABN98272.1| NLP/P60 protein [Mycobacterium sp. JLS]
Length=475

 Score =  162 bits (411),  Expect = 3e-38, Method: Compositional matrix adjust.
 Identities = 76/134 (57%), Positives = 96/134 (72%), Gaps = 3/134 (2%)

Query  37   VDYQQITDVVIARGLSQRGVPFSWAGGGISGPTRGTGTGINTVGFDASGLIQYAYAGAGL  96
            V  QQ T+ VI R +SQ GVP+SW GG  +GP+RG  +G NTVGFD SGL+ YA+AG G+
Sbjct  340  VHGQQATEYVIRRAMSQMGVPYSWGGGNAAGPSRGIDSGANTVGFDCSGLMLYAFAGVGI  399

Query  97   KLPRSSGQMYKVGQKVLPQQARKGDLIFYGPEGTQSVALYLGKGQMLE---VGDVVQVSP  153
            KL   SG  Y  G+KV   Q R+GD++F+GP  +Q VALYLG GQMLE    G VV+VSP
Sbjct  400  KLDHYSGSQYNAGRKVPSSQMRRGDMLFWGPNASQHVALYLGNGQMLEAPYTGSVVKVSP  459

Query  154  VRTNGMTPYLVRVL  167
            VR++GMTPY  R++
Sbjct  460  VRSSGMTPYATRLI  473


>gi|333990877|ref|YP_004523491.1| invasion and intracellular persistence protein IipA [Mycobacterium 
sp. JDM601]
 gi|333486845|gb|AEF36237.1| invasion and intracellular persistence protein IipA [Mycobacterium 
sp. JDM601]
Length=473

 Score =  161 bits (407),  Expect = 8e-38, Method: Compositional matrix adjust.
 Identities = 77/131 (59%), Positives = 99/131 (76%), Gaps = 3/131 (2%)

Query  40   QQITDVVIARGLSQRGVPFSWAGGGISGPTRGTGTGINTVGFDASGLIQYAYAGAGLKLP  99
            +Q ++ VI RG+SQRGVP+SW GG  +GP+RG G+G  TVGFD SGLI YA+AG G+KLP
Sbjct  341  RQASEYVIRRGMSQRGVPYSWGGGNAAGPSRGIGSGSGTVGFDCSGLILYAFAGVGIKLP  400

Query  100  RSSGQMYKVGQKVLPQQARKGDLIFYGPEGTQSVALYLGKGQMLEVGDV---VQVSPVRT  156
              SG  YK+G+++    AR+GD+IFYGP G+Q V LYLG G MLE  DV   V+VSPVR 
Sbjct  401  HYSGSQYKMGRQIPTAMARRGDVIFYGPGGSQHVTLYLGNGLMLEAPDVGQPVKVSPVRK  460

Query  157  NGMTPYLVRVL  167
            +GMTP++VR +
Sbjct  461  SGMTPFVVRYI  471


>gi|145223426|ref|YP_001134104.1| NLP/P60 protein [Mycobacterium gilvum PYR-GCK]
 gi|145215912|gb|ABP45316.1| NLP/P60 protein [Mycobacterium gilvum PYR-GCK]
Length=469

 Score =  159 bits (403),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 78/154 (51%), Positives = 103/154 (67%), Gaps = 8/154 (5%)

Query  22   VAAPGLAAADPATR-----PVDYQQITDVVIARGLSQRGVPFSWAGGGISGPTRGTGTGI  76
            + +P  AAADP         ++ +Q ++ VI R +SQ GVP+SW GG  +GP+RG   G 
Sbjct  314  ILSPAAAAADPGITNGRIPSLNGRQASEFVIRRAMSQLGVPYSWGGGNANGPSRGIDQGA  373

Query  77   NTVGFDASGLIQYAYAGAGLKLPRSSGQMYKVGQKVLPQQARKGDLIFYGPEGTQSVALY  136
            NTVGFD SGL+ YA+AG G+KL   SG  Y  G+KV   Q R+GDLIFYGP  +Q  ++Y
Sbjct  374  NTVGFDCSGLMLYAFAGVGIKLDHYSGSQYNAGRKVPSSQMRRGDLIFYGPNASQHESMY  433

Query  137  LGKGQMLE---VGDVVQVSPVRTNGMTPYLVRVL  167
            LG G MLE    G VV++SPVRT+GMTPY+ R++
Sbjct  434  LGDGMMLEAPYTGSVVKISPVRTSGMTPYVTRLI  467


>gi|118465185|ref|YP_882483.1| invasion protein [Mycobacterium avium 104]
 gi|254775746|ref|ZP_05217262.1| invasion protein [Mycobacterium avium subsp. avium ATCC 25291]
 gi|118166472|gb|ABK67369.1| hypothetical invasion protein [Mycobacterium avium 104]
Length=450

 Score =  159 bits (402),  Expect = 3e-37, Method: Compositional matrix adjust.
 Identities = 73/131 (56%), Positives = 98/131 (75%), Gaps = 3/131 (2%)

Query  40   QQITDVVIARGLSQRGVPFSWAGGGISGPTRGTGTGINTVGFDASGLIQYAYAGAGLKLP  99
            +Q T+ VI RG+SQ GVP+SW GG  +GP++G  +G N VGFD SGL+ Y++AG G+KLP
Sbjct  318  RQATEYVIRRGMSQIGVPYSWGGGNAAGPSKGIDSGANIVGFDCSGLVLYSFAGVGIKLP  377

Query  100  RSSGQMYKVGQKVLPQQARKGDLIFYGPEGTQSVALYLGKGQMLEVGDV---VQVSPVRT  156
              SG  Y +G+K+   Q R+GD+IFYGP G+Q V +YLG GQMLE  D+   V+V+PVRT
Sbjct  378  HYSGSQYNLGRKIPSSQMRRGDVIFYGPGGSQHVTIYLGDGQMLEAPDIGLKVRVAPVRT  437

Query  157  NGMTPYLVRVL  167
            +GMTPY+VR +
Sbjct  438  SGMTPYVVRYI  448


>gi|48928132|gb|AAT47744.1| hypothetical invasion protein [Mycobacterium avium]
Length=470

 Score =  159 bits (401),  Expect = 3e-37, Method: Compositional matrix adjust.
 Identities = 73/131 (56%), Positives = 98/131 (75%), Gaps = 3/131 (2%)

Query  40   QQITDVVIARGLSQRGVPFSWAGGGISGPTRGTGTGINTVGFDASGLIQYAYAGAGLKLP  99
            +Q T+ VI RG+SQ GVP+SW GG  +GP++G  +G N VGFD SGL+ Y++AG G+KLP
Sbjct  338  RQATEYVIRRGMSQIGVPYSWGGGNAAGPSKGIDSGANIVGFDCSGLVLYSFAGVGIKLP  397

Query  100  RSSGQMYKVGQKVLPQQARKGDLIFYGPEGTQSVALYLGKGQMLEVGDV---VQVSPVRT  156
              SG  Y +G+K+   Q R+GD+IFYGP G+Q V +YLG GQMLE  D+   V+V+PVRT
Sbjct  398  HYSGSQYNLGRKIPSSQMRRGDVIFYGPGGSQHVTIYLGDGQMLEAPDIGLKVRVAPVRT  457

Query  157  NGMTPYLVRVL  167
            +GMTPY+VR +
Sbjct  458  SGMTPYVVRYI  468


>gi|41407301|ref|NP_960137.1| hypothetical protein MAP1203 [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|41395653|gb|AAS03520.1| hypothetical protein MAP_1203 [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|336458030|gb|EGO37017.1| cell wall-associated hydrolase, invasion-associated protein [Mycobacterium 
avium subsp. paratuberculosis S397]
Length=470

 Score =  159 bits (401),  Expect = 4e-37, Method: Compositional matrix adjust.
 Identities = 73/131 (56%), Positives = 98/131 (75%), Gaps = 3/131 (2%)

Query  40   QQITDVVIARGLSQRGVPFSWAGGGISGPTRGTGTGINTVGFDASGLIQYAYAGAGLKLP  99
            +Q T+ VI RG+SQ GVP+SW GG  +GP++G  +G N VGFD SGL+ Y++AG G+KLP
Sbjct  338  RQATEYVIRRGMSQIGVPYSWGGGNAAGPSKGIDSGANIVGFDCSGLVLYSFAGVGIKLP  397

Query  100  RSSGQMYKVGQKVLPQQARKGDLIFYGPEGTQSVALYLGKGQMLEVGDV---VQVSPVRT  156
              SG  Y +G+K+   Q R+GD+IFYGP G+Q V +YLG GQMLE  D+   V+V+PVRT
Sbjct  398  HYSGSQYNLGRKIPSSQMRRGDVIFYGPGGSQHVTIYLGDGQMLEAPDIGLKVRVAPVRT  457

Query  157  NGMTPYLVRVL  167
            +GMTPY+VR +
Sbjct  458  SGMTPYVVRYI  468


>gi|120403731|ref|YP_953560.1| NLP/P60 protein [Mycobacterium vanbaalenii PYR-1]
 gi|119956549|gb|ABM13554.1| NLP/P60 protein [Mycobacterium vanbaalenii PYR-1]
Length=478

 Score =  159 bits (401),  Expect = 4e-37, Method: Compositional matrix adjust.
 Identities = 74/131 (57%), Positives = 94/131 (72%), Gaps = 3/131 (2%)

Query  40   QQITDVVIARGLSQRGVPFSWAGGGISGPTRGTGTGINTVGFDASGLIQYAYAGAGLKLP  99
            +Q T+ VI RG+SQ GVP+SW GG  SGP+RG   G  TVGFD SGL+ Y +AG G+KL 
Sbjct  346  RQATEYVIKRGMSQMGVPYSWGGGNASGPSRGIDQGAGTVGFDCSGLMLYMFAGVGIKLD  405

Query  100  RSSGQMYKVGQKVLPQQARKGDLIFYGPEGTQSVALYLGKGQMLE---VGDVVQVSPVRT  156
              SG  Y  G+KV   Q R+GD+IFYGP  +Q VA+YLG GQMLE    G VV++SPVRT
Sbjct  406  HYSGSQYNAGRKVPSSQMRRGDMIFYGPNASQHVAMYLGDGQMLEAPYTGSVVKISPVRT  465

Query  157  NGMTPYLVRVL  167
            +GMTP++ R++
Sbjct  466  SGMTPFVTRMI  476


>gi|120403324|ref|YP_953153.1| NLP/P60 protein [Mycobacterium vanbaalenii PYR-1]
 gi|119956142|gb|ABM13147.1| NLP/P60 protein [Mycobacterium vanbaalenii PYR-1]
Length=432

 Score =  159 bits (401),  Expect = 4e-37, Method: Compositional matrix adjust.
 Identities = 75/130 (58%), Positives = 95/130 (74%), Gaps = 3/130 (2%)

Query  41   QITDVVIARGLSQRGVPFSWAGGGISGPTRGTGTGINTVGFDASGLIQYAYAGAGLKLPR  100
            Q ++ V+AR LSQRGVP+SW GG  +GP+RG  TG + VGFD SGLI YA+AG G+ LP 
Sbjct  301  QASEYVVARALSQRGVPYSWGGGAATGPSRGIDTGADVVGFDCSGLILYAFAGVGIALPH  360

Query  101  SSGQMYKVGQKVLPQQARKGDLIFYGPEGTQSVALYLGKGQMLEV---GDVVQVSPVRTN  157
             +G  Y+ G++V   Q R+GD+IF+GP G++ VALYLG G MLE    G  VQVSPVRT+
Sbjct  361  YTGHQYQAGRQVPVTQMRRGDVIFFGPGGSEHVALYLGNGVMLEAPRPGQFVQVSPVRTS  420

Query  158  GMTPYLVRVL  167
            GMTPY VR +
Sbjct  421  GMTPYAVRFI  430


>gi|296392615|ref|YP_003657499.1| NLP/P60 protein [Segniliparus rotundus DSM 44985]
 gi|296179762|gb|ADG96668.1| NLP/P60 protein [Segniliparus rotundus DSM 44985]
Length=164

 Score =  159 bits (401),  Expect = 4e-37, Method: Compositional matrix adjust.
 Identities = 89/160 (56%), Positives = 110/160 (69%), Gaps = 7/160 (4%)

Query  15   AMMLAPMV---AAPGLAAADPATRPV-DYQQITDVVIARGLSQRGVPFSWAGGGISGPTR  70
            A M+A +V    A   A A+P   PV D QQ     IAR L+QRG+P+ + GG   GPT 
Sbjct  6    AAMIAGLVFLGTAKSFALAEPVNHPVNDEQQSVSTAIARALAQRGMPYVYGGGNAQGPT-  64

Query  71   GTGTGINTVGFDASGLIQYAYAGAGLKLPRSSGQMY-KVGQKVLPQQARKGDLIFYGPEG  129
            G   G   VGFDASGL+ YA+AGAG+KLPR+S   Y K G+ V PQQA+ GDLIFYGP G
Sbjct  65   GNPNGTGVVGFDASGLMVYAFAGAGVKLPRTSTDQYNKAGRSVWPQQAQPGDLIFYGPNG  124

Query  130  TQSVALYLGKGQMLEVGD-VVQVSPVRTNGMTPYLVRVLG  168
            T+SVA+YLG GQMLE  + VV +SPVR+ GM PY++RV+G
Sbjct  125  TESVAMYLGNGQMLEATNPVVTISPVRSEGMAPYMIRVIG  164


>gi|317509377|ref|ZP_07966996.1| NlpC/P60 family protein [Segniliparus rugosus ATCC BAA-974]
 gi|316252300|gb|EFV11751.1| NlpC/P60 family protein [Segniliparus rugosus ATCC BAA-974]
Length=164

 Score =  158 bits (400),  Expect = 5e-37, Method: Compositional matrix adjust.
 Identities = 86/153 (57%), Positives = 107/153 (70%), Gaps = 3/153 (1%)

Query  18   LAPMVAAPGLAAADPATRPVDYQQIT-DVVIARGLSQRGVPFSWAGGGISGPTRGTGTGI  76
            LA   +AP LA A+P       QQ+T    ++RGL+QRGVP+ + GG   GPT G   G 
Sbjct  13   LALFGSAPSLATAEPVAPSSGNQQMTAGAAMSRGLAQRGVPYVYGGGNAQGPT-GNPNGT  71

Query  77   NTVGFDASGLIQYAYAGAGLKLPRSSGQMYKVGQKVLPQQARKGDLIFYGPEGTQSVALY  136
              VGFDASGL+ Y++A AG+KLPRSSG  YK G+K+ P QA  GDLIFYGP+G++SVA++
Sbjct  72   GVVGFDASGLMVYSFAAAGVKLPRSSGDQYKYGRKIYPSQAVPGDLIFYGPDGSESVAMF  131

Query  137  LGKGQMLEVGD-VVQVSPVRTNGMTPYLVRVLG  168
            LG GQMLE     V VSPVR NGM PY+VRV+G
Sbjct  132  LGNGQMLEATTPCVTVSPVRVNGMAPYMVRVVG  164


>gi|145224247|ref|YP_001134925.1| NLP/P60 protein [Mycobacterium gilvum PYR-GCK]
 gi|315444583|ref|YP_004077462.1| cell wall-associated hydrolase, invasion-associated protein [Mycobacterium 
sp. Spyr1]
 gi|145216733|gb|ABP46137.1| NLP/P60 protein [Mycobacterium gilvum PYR-GCK]
 gi|315262886|gb|ADT99627.1| cell wall-associated hydrolase, invasion-associated protein [Mycobacterium 
sp. Spyr1]
Length=479

 Score =  158 bits (400),  Expect = 5e-37, Method: Compositional matrix adjust.
 Identities = 73/128 (58%), Positives = 93/128 (73%), Gaps = 3/128 (2%)

Query  43   TDVVIARGLSQRGVPFSWAGGGISGPTRGTGTGINTVGFDASGLIQYAYAGAGLKLPRSS  102
            T+ VI RG+SQ GVP+SW GG  +GP+RG  +G  TVGFD SGL+ Y +AG G+KL   S
Sbjct  350  TEYVIKRGMSQMGVPYSWGGGNAAGPSRGIDSGAGTVGFDCSGLMLYMFAGVGIKLDHYS  409

Query  103  GQMYKVGQKVLPQQARKGDLIFYGPEGTQSVALYLGKGQMLE---VGDVVQVSPVRTNGM  159
            G  Y  G+KV   Q R+GD+IFYGP  +Q VA+YLG GQMLE    G VV++SPVRT+GM
Sbjct  410  GSQYNAGRKVPSSQMRRGDMIFYGPNASQHVAMYLGDGQMLEAPYTGSVVKISPVRTSGM  469

Query  160  TPYLVRVL  167
            TPY+ R++
Sbjct  470  TPYVTRMI  477


>gi|108798411|ref|YP_638608.1| NLP/P60 [Mycobacterium sp. MCS]
 gi|119867508|ref|YP_937460.1| NLP/P60 protein [Mycobacterium sp. KMS]
 gi|108768830|gb|ABG07552.1| NLP/P60 [Mycobacterium sp. MCS]
 gi|119693597|gb|ABL90670.1| NLP/P60 protein [Mycobacterium sp. KMS]
Length=467

 Score =  158 bits (400),  Expect = 6e-37, Method: Compositional matrix adjust.
 Identities = 79/154 (52%), Positives = 103/154 (67%), Gaps = 8/154 (5%)

Query  22   VAAPGLAAADPATR----PVDY-QQITDVVIARGLSQRGVPFSWAGGGISGPTRGTGTGI  76
            + +P  AAADP       P  Y QQ +++VI R +SQ GVP+SW GG  +GP RG   G 
Sbjct  312  ILSPASAAADPGITNGRIPRVYGQQASELVIRRAMSQLGVPYSWGGGNANGPARGIDQGA  371

Query  77   NTVGFDASGLIQYAYAGAGLKLPRSSGQMYKVGQKVLPQQARKGDLIFYGPEGTQSVALY  136
            NTVGFD SGL+ YA+AG G+KL   SG  Y  G+K+   Q R+GDLIFYGP  +Q  A+Y
Sbjct  372  NTVGFDCSGLMLYAFAGVGIKLDHYSGSQYNAGRKIPSAQMRRGDLIFYGPNASQHEAMY  431

Query  137  LGKGQMLE---VGDVVQVSPVRTNGMTPYLVRVL  167
            LG G M+E    G VV++SPVR++GMTPY+ R++
Sbjct  432  LGNGMMIEAPYTGSVVKISPVRSSGMTPYVTRLI  465


>gi|126435282|ref|YP_001070973.1| NLP/P60 protein [Mycobacterium sp. JLS]
 gi|126235082|gb|ABN98482.1| NLP/P60 protein [Mycobacterium sp. JLS]
Length=204

 Score =  157 bits (398),  Expect = 1e-36, Method: Compositional matrix adjust.
 Identities = 95/197 (49%), Positives = 114/197 (58%), Gaps = 43/197 (21%)

Query  14   LAMMLAPMVAAPGLAAADPATRPVDYQQITDVVIARGLSQRGVPFSWAGGGISGPTRGTG  73
            + + LA  +A  G A+A+    P   QQ  D+VIAR LSQRGVPF++ GG  +GPT G  
Sbjct  7    VVICLALSLATAGTASAELFPLPTRNQQAVDLVIARALSQRGVPFAYGGGNTAGPTLGNP  66

Query  74   ------------------TGIN------------------------TVGFDASGLIQYAY  91
                               G N                         VGFDASGL+ YA+
Sbjct  67   GGSSAPAPAAAPPGAIPVDGTNGAIPIAGLPAAAPALVLPEPPRPQVVGFDASGLMVYAF  126

Query  92   AGAGLKLPRSSGQMYKVGQKVLPQQARKGDLIFYGPEGTQSVALYLGKGQMLEVGD-VVQ  150
            AGAGLK+PR+SG  Y VG+KVLP QA  GDLIFYGP GTQSVA+++G GQM+E  D VVQ
Sbjct  127  AGAGLKIPRTSGDQYLVGRKVLPSQALPGDLIFYGPNGTQSVAMFIGGGQMVEATDPVVQ  186

Query  151  VSPVRTNGMTPYLVRVL  167
            VSPVRTN M PYLVR +
Sbjct  187  VSPVRTNNMAPYLVRYI  203


>gi|15608615|ref|NP_215993.1| invasion protein [Mycobacterium tuberculosis H37Rv]
 gi|31792672|ref|NP_855165.1| invasion protein [Mycobacterium bovis AF2122/97]
 gi|121637408|ref|YP_977631.1| invasion protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
 71 more sequence titles
 gi|148661270|ref|YP_001282793.1| invasion protein [Mycobacterium tuberculosis H37Ra]
 gi|148822697|ref|YP_001287451.1| invasion protein [Mycobacterium tuberculosis F11]
 gi|224989883|ref|YP_002644570.1| hypothetical invasion protein [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|253799473|ref|YP_003032474.1| invasion-associated protein [Mycobacterium tuberculosis KZN 1435]
 gi|254231708|ref|ZP_04925035.1| hypothetical invasion protein [Mycobacterium tuberculosis C]
 gi|254364348|ref|ZP_04980394.1| hypothetical invasion protein [Mycobacterium tuberculosis str. 
Haarlem]
 gi|254550494|ref|ZP_05140941.1| invasion-associated protein [Mycobacterium tuberculosis '98-R604 
INH-RIF-EM']
 gi|289442925|ref|ZP_06432669.1| invasion-associated protein [Mycobacterium tuberculosis T46]
 gi|289447080|ref|ZP_06436824.1| invasion-associated protein [Mycobacterium tuberculosis CPHL_A]
 gi|289554733|ref|ZP_06443943.1| invasion-associated protein [Mycobacterium tuberculosis KZN 605]
 gi|289569501|ref|ZP_06449728.1| invasion-associated protein [Mycobacterium tuberculosis T17]
 gi|289574158|ref|ZP_06454385.1| invasion-associated protein [Mycobacterium tuberculosis K85]
 gi|289745228|ref|ZP_06504606.1| invasion protein [Mycobacterium tuberculosis 02_1987]
 gi|289750038|ref|ZP_06509416.1| invasion-associated protein [Mycobacterium tuberculosis T92]
 gi|289753560|ref|ZP_06512938.1| invasion protein [Mycobacterium tuberculosis EAS054]
 gi|289757589|ref|ZP_06516967.1| invasion protein [Mycobacterium tuberculosis T85]
 gi|289761635|ref|ZP_06521013.1| hypothetical invasion protein [Mycobacterium tuberculosis GM 
1503]
 gi|297634043|ref|ZP_06951823.1| invasion-associated protein [Mycobacterium tuberculosis KZN 4207]
 gi|297731029|ref|ZP_06960147.1| invasion-associated protein [Mycobacterium tuberculosis KZN R506]
 gi|298524986|ref|ZP_07012395.1| cell wall-associated hydrolase [Mycobacterium tuberculosis 94_M4241A]
 gi|306775666|ref|ZP_07414003.1| invasion-associated protein [Mycobacterium tuberculosis SUMu001]
 gi|306779486|ref|ZP_07417823.1| invasion-associated protein [Mycobacterium tuberculosis SUMu002]
 gi|306784216|ref|ZP_07422538.1| invasion-associated protein [Mycobacterium tuberculosis SUMu003]
 gi|306788583|ref|ZP_07426905.1| invasion-associated protein [Mycobacterium tuberculosis SUMu004]
 gi|306792926|ref|ZP_07431228.1| invasion-associated protein [Mycobacterium tuberculosis SUMu005]
 gi|306797304|ref|ZP_07435606.1| invasion-associated protein [Mycobacterium tuberculosis SUMu006]
 gi|306803185|ref|ZP_07439853.1| invasion-associated protein [Mycobacterium tuberculosis SUMu008]
 gi|306807764|ref|ZP_07444432.1| invasion-associated protein [Mycobacterium tuberculosis SUMu007]
 gi|306967584|ref|ZP_07480245.1| invasion-associated protein [Mycobacterium tuberculosis SUMu009]
 gi|306971775|ref|ZP_07484436.1| invasion-associated protein [Mycobacterium tuberculosis SUMu010]
 gi|307079494|ref|ZP_07488664.1| invasion-associated protein [Mycobacterium tuberculosis SUMu011]
 gi|307084053|ref|ZP_07493166.1| invasion-associated protein [Mycobacterium tuberculosis SUMu012]
 gi|313658362|ref|ZP_07815242.1| invasion-associated protein [Mycobacterium tuberculosis KZN V2475]
 gi|339631545|ref|YP_004723187.1| invasion protein [Mycobacterium africanum GM041182]
 gi|2791411|emb|CAA16005.1| HYPOTHETICAL INVASION PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|31618262|emb|CAD96180.1| HYPOTHETICAL INVASION PROTEIN [Mycobacterium bovis AF2122/97]
 gi|121493055|emb|CAL71526.1| Hypothetical invasion protein [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|124600767|gb|EAY59777.1| hypothetical invasion protein [Mycobacterium tuberculosis C]
 gi|134149862|gb|EBA41907.1| hypothetical invasion protein [Mycobacterium tuberculosis str. 
Haarlem]
 gi|148505422|gb|ABQ73231.1| hypothetical invasion protein [Mycobacterium tuberculosis H37Ra]
 gi|148721224|gb|ABR05849.1| hypothetical invasion protein [Mycobacterium tuberculosis F11]
 gi|224772996|dbj|BAH25802.1| hypothetical invasion protein [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|253320976|gb|ACT25579.1| invasion-associated protein [Mycobacterium tuberculosis KZN 1435]
 gi|289415844|gb|EFD13084.1| invasion-associated protein [Mycobacterium tuberculosis T46]
 gi|289420038|gb|EFD17239.1| invasion-associated protein [Mycobacterium tuberculosis CPHL_A]
 gi|289439365|gb|EFD21858.1| invasion-associated protein [Mycobacterium tuberculosis KZN 605]
 gi|289538589|gb|EFD43167.1| invasion-associated protein [Mycobacterium tuberculosis K85]
 gi|289543255|gb|EFD46903.1| invasion-associated protein [Mycobacterium tuberculosis T17]
 gi|289685756|gb|EFD53244.1| invasion protein [Mycobacterium tuberculosis 02_1987]
 gi|289690625|gb|EFD58054.1| invasion-associated protein [Mycobacterium tuberculosis T92]
 gi|289694147|gb|EFD61576.1| invasion protein [Mycobacterium tuberculosis EAS054]
 gi|289709141|gb|EFD73157.1| hypothetical invasion protein [Mycobacterium tuberculosis GM 
1503]
 gi|289713153|gb|EFD77165.1| invasion protein [Mycobacterium tuberculosis T85]
 gi|298494780|gb|EFI30074.1| cell wall-associated hydrolase [Mycobacterium tuberculosis 94_M4241A]
 gi|308215763|gb|EFO75162.1| invasion-associated protein [Mycobacterium tuberculosis SUMu001]
 gi|308327527|gb|EFP16378.1| invasion-associated protein [Mycobacterium tuberculosis SUMu002]
 gi|308330990|gb|EFP19841.1| invasion-associated protein [Mycobacterium tuberculosis SUMu003]
 gi|308334812|gb|EFP23663.1| invasion-associated protein [Mycobacterium tuberculosis SUMu004]
 gi|308338600|gb|EFP27451.1| invasion-associated protein [Mycobacterium tuberculosis SUMu005]
 gi|308342302|gb|EFP31153.1| invasion-associated protein [Mycobacterium tuberculosis SUMu006]
 gi|308345796|gb|EFP34647.1| invasion-associated protein [Mycobacterium tuberculosis SUMu007]
 gi|308350096|gb|EFP38947.1| invasion-associated protein [Mycobacterium tuberculosis SUMu008]
 gi|308354733|gb|EFP43584.1| invasion-associated protein [Mycobacterium tuberculosis SUMu009]
 gi|308358640|gb|EFP47491.1| invasion-associated protein [Mycobacterium tuberculosis SUMu010]
 gi|308362618|gb|EFP51469.1| invasion-associated protein [Mycobacterium tuberculosis SUMu011]
 gi|308366300|gb|EFP55151.1| invasion-associated protein [Mycobacterium tuberculosis SUMu012]
 gi|323719925|gb|EGB29037.1| invasion-associated protein [Mycobacterium tuberculosis CDC1551A]
 gi|328459221|gb|AEB04644.1| invasion-associated protein [Mycobacterium tuberculosis KZN 4207]
 gi|339330901|emb|CCC26572.1| putative invasion protein [Mycobacterium africanum GM041182]
 gi|341601427|emb|CCC64100.1| hypothetical invasion protein [Mycobacterium bovis BCG str. Moreau 
RDJ]
 gi|344219308|gb|AEM99938.1| invasion protein [Mycobacterium tuberculosis CTRI-2]
Length=472

 Score =  157 bits (397),  Expect = 1e-36, Method: Compositional matrix adjust.
 Identities = 73/131 (56%), Positives = 97/131 (75%), Gaps = 3/131 (2%)

Query  40   QQITDVVIARGLSQRGVPFSWAGGGISGPTRGTGTGINTVGFDASGLIQYAYAGAGLKLP  99
            +Q ++ VI RG+SQ GVP+SW GG  +GP++G  +G  TVGFD SGL+ Y++AG G+KLP
Sbjct  340  RQASEYVIRRGMSQIGVPYSWGGGNAAGPSKGIDSGAGTVGFDCSGLVLYSFAGVGIKLP  399

Query  100  RSSGQMYKVGQKVLPQQARKGDLIFYGPEGTQSVALYLGKGQMLEVGDV---VQVSPVRT  156
              SG  Y +G+K+   Q R+GD+IFYGP G+Q V +YLG GQMLE  DV   V+V+PVRT
Sbjct  400  HYSGSQYNLGRKIPSSQMRRGDVIFYGPNGSQHVTIYLGNGQMLEAPDVGLKVRVAPVRT  459

Query  157  NGMTPYLVRVL  167
             GMTPY+VR +
Sbjct  460  AGMTPYVVRYI  470


>gi|340626492|ref|YP_004744944.1| hypothetical protein MCAN_14941 [Mycobacterium canettii CIPT 
140010059]
 gi|340004682|emb|CCC43826.1| hypothetical invasion protein [Mycobacterium canettii CIPT 140010059]
Length=472

 Score =  157 bits (397),  Expect = 1e-36, Method: Compositional matrix adjust.
 Identities = 73/131 (56%), Positives = 97/131 (75%), Gaps = 3/131 (2%)

Query  40   QQITDVVIARGLSQRGVPFSWAGGGISGPTRGTGTGINTVGFDASGLIQYAYAGAGLKLP  99
            +Q ++ VI RG+SQ GVP+SW GG  +GP++G  +G  TVGFD SGL+ Y++AG G+KLP
Sbjct  340  RQASEYVIRRGMSQIGVPYSWGGGNAAGPSKGIDSGAGTVGFDCSGLVLYSFAGVGIKLP  399

Query  100  RSSGQMYKVGQKVLPQQARKGDLIFYGPEGTQSVALYLGKGQMLEVGDV---VQVSPVRT  156
              SG  Y +G+K+   Q R+GD+IFYGP G+Q V +YLG GQMLE  DV   V+V+PVRT
Sbjct  400  HYSGSQYNLGRKIPSSQMRRGDVIFYGPNGSQHVTIYLGNGQMLEAPDVGLKVRVAPVRT  459

Query  157  NGMTPYLVRVL  167
             GMTPY+VR +
Sbjct  460  AGMTPYVVRYI  470


>gi|339294452|gb|AEJ46563.1| invasion protein [Mycobacterium tuberculosis CCDC5079]
 gi|339298092|gb|AEJ50202.1| invasion protein [Mycobacterium tuberculosis CCDC5180]
Length=446

 Score =  157 bits (397),  Expect = 1e-36, Method: Compositional matrix adjust.
 Identities = 73/131 (56%), Positives = 97/131 (75%), Gaps = 3/131 (2%)

Query  40   QQITDVVIARGLSQRGVPFSWAGGGISGPTRGTGTGINTVGFDASGLIQYAYAGAGLKLP  99
            +Q ++ VI RG+SQ GVP+SW GG  +GP++G  +G  TVGFD SGL+ Y++AG G+KLP
Sbjct  314  RQASEYVIRRGMSQIGVPYSWGGGNAAGPSKGIDSGAGTVGFDCSGLVLYSFAGVGIKLP  373

Query  100  RSSGQMYKVGQKVLPQQARKGDLIFYGPEGTQSVALYLGKGQMLEVGDV---VQVSPVRT  156
              SG  Y +G+K+   Q R+GD+IFYGP G+Q V +YLG GQMLE  DV   V+V+PVRT
Sbjct  374  HYSGSQYNLGRKIPSSQMRRGDVIFYGPNGSQHVTIYLGNGQMLEAPDVGLKVRVAPVRT  433

Query  157  NGMTPYLVRVL  167
             GMTPY+VR +
Sbjct  434  AGMTPYVVRYI  444


>gi|145221489|ref|YP_001132167.1| NLP/P60 protein [Mycobacterium gilvum PYR-GCK]
 gi|145213975|gb|ABP43379.1| NLP/P60 protein [Mycobacterium gilvum PYR-GCK]
Length=469

 Score =  157 bits (396),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 80/164 (49%), Positives = 107/164 (66%), Gaps = 8/164 (4%)

Query  12   IGLAMMLAPMVAAPGLAAADPATR----PVDY-QQITDVVIARGLSQRGVPFSWAGGGIS  66
            +G   ++   + +P  AAADP       P  Y +Q ++ VI R +SQ GVP+SW GG  +
Sbjct  304  MGRNFLVKLGILSPATAAADPGITNGRIPRLYGRQASEFVIRRAMSQLGVPYSWGGGNAN  363

Query  67   GPTRGTGTGINTVGFDASGLIQYAYAGAGLKLPRSSGQMYKVGQKVLPQQARKGDLIFYG  126
            GP+RG   G NTVGFD SGL+ YA+AG G+KL   SG  Y  G+KV   Q ++GDLIFYG
Sbjct  364  GPSRGIDQGANTVGFDCSGLMLYAFAGVGIKLDHYSGSQYNAGRKVPSSQMQRGDLIFYG  423

Query  127  PEGTQSVALYLGKGQMLE---VGDVVQVSPVRTNGMTPYLVRVL  167
            P  +Q  A+YLG G MLE    G VV++SPVR++GMTPY+ R++
Sbjct  424  PNASQHEAMYLGDGMMLEAPYTGSVVKISPVRSSGMTPYVTRLI  467


>gi|315441513|ref|YP_004074390.1| cell wall-associated hydrolase, invasion-associated protein [Mycobacterium 
sp. Spyr1]
 gi|315265168|gb|ADU01909.1| cell wall-associated hydrolase, invasion-associated protein [Mycobacterium 
sp. Spyr1]
Length=469

 Score =  156 bits (395),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 79/154 (52%), Positives = 103/154 (67%), Gaps = 8/154 (5%)

Query  22   VAAPGLAAADPATR----PVDY-QQITDVVIARGLSQRGVPFSWAGGGISGPTRGTGTGI  76
            + +P  AAADP       P  Y +Q ++ VI R +SQ GVP+SW GG  +GP+RG   G 
Sbjct  314  ILSPATAAADPGITNGRIPRLYGRQASEFVIRRAMSQLGVPYSWGGGNANGPSRGIDQGA  373

Query  77   NTVGFDASGLIQYAYAGAGLKLPRSSGQMYKVGQKVLPQQARKGDLIFYGPEGTQSVALY  136
            NTVGFD SGL+ YA+AG G+KL   SG  Y  G+KV   Q ++GDLIFYGP  +Q  A+Y
Sbjct  374  NTVGFDCSGLMLYAFAGVGIKLDHYSGSQYNAGRKVPSSQMQRGDLIFYGPNASQHEAMY  433

Query  137  LGKGQMLE---VGDVVQVSPVRTNGMTPYLVRVL  167
            LG G MLE    G VV++SPVR++GMTPY+ R++
Sbjct  434  LGDGMMLEAPYTGSVVKISPVRSSGMTPYVTRLI  467


>gi|126437131|ref|YP_001072822.1| NLP/P60 protein [Mycobacterium sp. JLS]
 gi|126236931|gb|ABO00332.1| NLP/P60 protein [Mycobacterium sp. JLS]
Length=467

 Score =  156 bits (395),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 79/154 (52%), Positives = 103/154 (67%), Gaps = 8/154 (5%)

Query  22   VAAPGLAAADPATR----PVDY-QQITDVVIARGLSQRGVPFSWAGGGISGPTRGTGTGI  76
            + +P  AAADP       P  Y +Q ++ VI R +SQ GVP+SW GG  +GP+RG   G 
Sbjct  312  ILSPVTAAADPGITNGRIPRLYGRQASEFVIRRAMSQLGVPYSWGGGNANGPSRGIDQGA  371

Query  77   NTVGFDASGLIQYAYAGAGLKLPRSSGQMYKVGQKVLPQQARKGDLIFYGPEGTQSVALY  136
            NTVGFD SGL+ YA+AG G+KL   SG  Y  G+K+   Q R+GDLIFYGP  +Q  A+Y
Sbjct  372  NTVGFDCSGLMLYAFAGVGIKLDHYSGSQYNAGRKIPSSQMRRGDLIFYGPNASQHEAMY  431

Query  137  LGKGQMLE---VGDVVQVSPVRTNGMTPYLVRVL  167
            LG G M+E    G VV++SPVRT+GMTPY+ R++
Sbjct  432  LGDGMMIEAPYTGSVVKISPVRTSGMTPYVTRLI  465


>gi|326903103|gb|EGE50036.1| invasion-associated protein [Mycobacterium tuberculosis W-148]
Length=472

 Score =  156 bits (394),  Expect = 3e-36, Method: Compositional matrix adjust.
 Identities = 73/131 (56%), Positives = 97/131 (75%), Gaps = 3/131 (2%)

Query  40   QQITDVVIARGLSQRGVPFSWAGGGISGPTRGTGTGINTVGFDASGLIQYAYAGAGLKLP  99
            +Q ++ VI RG+SQ GVP+SW GG  +GP++G  +G  TVGFD SGL+ Y++AG G+KLP
Sbjct  340  RQASEYVIRRGMSQIGVPYSWGGGNPAGPSKGIDSGAGTVGFDCSGLVLYSFAGVGIKLP  399

Query  100  RSSGQMYKVGQKVLPQQARKGDLIFYGPEGTQSVALYLGKGQMLEVGDV---VQVSPVRT  156
              SG  Y +G+K+   Q R+GD+IFYGP G+Q V +YLG GQMLE  DV   V+V+PVRT
Sbjct  400  HYSGSQYNLGRKIPSSQMRRGDVIFYGPNGSQHVTIYLGNGQMLEAPDVGLKVRVAPVRT  459

Query  157  NGMTPYLVRVL  167
             GMTPY+VR +
Sbjct  460  AGMTPYVVRYI  470


>gi|119855103|ref|YP_935708.1| NLP/P60 protein [Mycobacterium sp. KMS]
 gi|145225890|ref|YP_001136544.1| NLP/P60 protein [Mycobacterium gilvum PYR-GCK]
 gi|119697821|gb|ABL94893.1| NLP/P60 protein [Mycobacterium sp. KMS]
 gi|145218353|gb|ABP47756.1| NLP/P60 protein [Mycobacterium gilvum PYR-GCK]
Length=469

 Score =  155 bits (393),  Expect = 3e-36, Method: Compositional matrix adjust.
 Identities = 79/154 (52%), Positives = 102/154 (67%), Gaps = 8/154 (5%)

Query  22   VAAPGLAAADPATR----PVDY-QQITDVVIARGLSQRGVPFSWAGGGISGPTRGTGTGI  76
            + +P  AAADP       P  Y +Q ++ VI R +SQ GVP+SW GG  +GP RG   G 
Sbjct  314  ILSPATAAADPGITNGRIPRLYGRQASEFVIRRAMSQLGVPYSWGGGNANGPARGIDQGA  373

Query  77   NTVGFDASGLIQYAYAGAGLKLPRSSGQMYKVGQKVLPQQARKGDLIFYGPEGTQSVALY  136
            NTVGFD SGL+ YA+AG G+KL   SG  Y  G+KV   Q ++GDLIFYGP  +Q  A+Y
Sbjct  374  NTVGFDCSGLMLYAFAGVGIKLDHYSGSQYNAGRKVPSSQMQRGDLIFYGPNASQHEAMY  433

Query  137  LGKGQMLE---VGDVVQVSPVRTNGMTPYLVRVL  167
            LG G MLE    G VV++SPVR++GMTPY+ R++
Sbjct  434  LGDGMMLEAPYTGSVVKISPVRSSGMTPYVTRLI  467


>gi|342858768|ref|ZP_08715423.1| hypothetical protein MCOL_07821 [Mycobacterium colombiense CECT 
3035]
 gi|342134472|gb|EGT87652.1| hypothetical protein MCOL_07821 [Mycobacterium colombiense CECT 
3035]
Length=482

 Score =  155 bits (392),  Expect = 4e-36, Method: Compositional matrix adjust.
 Identities = 72/131 (55%), Positives = 96/131 (74%), Gaps = 3/131 (2%)

Query  40   QQITDVVIARGLSQRGVPFSWAGGGISGPTRGTGTGINTVGFDASGLIQYAYAGAGLKLP  99
            +Q T+ VI RG+SQ GVP+SW GG  +GP+RG  +G    GFD SGL+ Y++AG G+KLP
Sbjct  350  RQATEYVIRRGMSQIGVPYSWGGGNAAGPSRGIDSGAGITGFDCSGLVLYSFAGVGIKLP  409

Query  100  RSSGQMYKVGQKVLPQQARKGDLIFYGPEGTQSVALYLGKGQMLEVGDV---VQVSPVRT  156
              SG  Y +G+K+   Q R+GD+IFYGP G+Q V +YLG GQMLE  D+   V+V+PVRT
Sbjct  410  HYSGSQYNLGRKIPSSQMRRGDVIFYGPGGSQHVTIYLGDGQMLEAPDIGLKVRVAPVRT  469

Query  157  NGMTPYLVRVL  167
            +GMTPY+VR +
Sbjct  470  SGMTPYVVRYI  480


>gi|120404621|ref|YP_954450.1| NLP/P60 protein [Mycobacterium vanbaalenii PYR-1]
 gi|119957439|gb|ABM14444.1| NLP/P60 protein [Mycobacterium vanbaalenii PYR-1]
Length=469

 Score =  155 bits (392),  Expect = 4e-36, Method: Compositional matrix adjust.
 Identities = 78/154 (51%), Positives = 103/154 (67%), Gaps = 8/154 (5%)

Query  22   VAAPGLAAADPATR----PVDY-QQITDVVIARGLSQRGVPFSWAGGGISGPTRGTGTGI  76
            + +P  AAADP       P  Y +Q ++ VI R +SQ GVP+SW GG  +GP+RG   G 
Sbjct  314  ILSPATAAADPGITNGRIPRLYGRQASEFVIRRAMSQLGVPYSWGGGNANGPSRGIDQGA  373

Query  77   NTVGFDASGLIQYAYAGAGLKLPRSSGQMYKVGQKVLPQQARKGDLIFYGPEGTQSVALY  136
            NTVGFD SGL+ YA+AG G+KL   SG  Y  G+KV   Q ++GDLIFYGP  +Q  A+Y
Sbjct  374  NTVGFDCSGLMLYAFAGVGIKLDHYSGSQYNAGRKVPSSQMQRGDLIFYGPNASQHEAMY  433

Query  137  LGKGQMLE---VGDVVQVSPVRTNGMTPYLVRVL  167
            LG G M+E    G VV++SPVR++GMTPY+ R++
Sbjct  434  LGDGMMIEAPYTGSVVKISPVRSSGMTPYVTRLI  467



Lambda     K      H
   0.316    0.133    0.388 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 300567788510


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40