BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv1591

Length=221
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|308375620|ref|ZP_07444536.2|  hypothetical protein TMGG_00132 ...   432    1e-119
gi|15608729|ref|NP_216107.1|  hypothetical protein Rv1591 [Mycoba...   431    3e-119
gi|254231794|ref|ZP_04925121.1|  hypothetical protein TBCG_01545 ...   430    6e-119
gi|289443043|ref|ZP_06432787.1|  transmembrane protein [Mycobacte...   429    1e-118
gi|289574258|ref|ZP_06454485.1|  transmembrane protein [Mycobacte...   428    3e-118
gi|253799371|ref|YP_003032372.1|  hypothetical protein TBMG_02403...   428    3e-118
gi|308369478|ref|ZP_07417925.2|  hypothetical protein TMBG_00130 ...   378    3e-103
gi|15841043|ref|NP_336080.1|  hypothetical protein MT1626 [Mycoba...   378    3e-103
gi|289745972|ref|ZP_06505350.1|  conserved hypothetical protein [...   304    5e-81 
gi|240167962|ref|ZP_04746621.1|  putative transmembrane protein [...   248    4e-64 
gi|254820716|ref|ZP_05225717.1|  hypothetical protein MintA_12356...   236    2e-60 
gi|15827622|ref|NP_301885.1|  hypothetical protein ML1222 [Mycoba...   206    1e-51 
gi|118617215|ref|YP_905547.1|  hypothetical protein MUL_1565 [Myc...   204    6e-51 
gi|333990795|ref|YP_004523409.1|  hypothetical protein JDM601_215...   197    1e-48 
gi|342860838|ref|ZP_08717488.1|  hypothetical protein MCOL_18243 ...   192    3e-47 
gi|183982402|ref|YP_001850693.1|  hypothetical protein MMAR_2388 ...   186    2e-45 
gi|296164456|ref|ZP_06847029.1|  transmembrane protein [Mycobacte...   181    7e-44 
gi|254775642|ref|ZP_05217158.1|  hypothetical protein MaviaA2_133...   166    2e-39 
gi|118462400|ref|YP_882377.1|  hypothetical protein MAV_3193 [Myc...   162    3e-38 
gi|169629767|ref|YP_001703416.1|  hypothetical protein MAB_2682c ...   162    3e-38 
gi|41407383|ref|NP_960219.1|  hypothetical protein MAP1285 [Mycob...   162    4e-38 
gi|336457937|gb|EGO36928.1|  Protein of unknown function (DUF2567...   161    6e-38 
gi|108800037|ref|YP_640234.1|  hypothetical protein Mmcs_3071 [My...   147    1e-33 
gi|118473976|ref|YP_887510.1|  hypothetical protein MSMEG_3196 [M...   142    3e-32 
gi|315444540|ref|YP_004077419.1|  hypothetical protein Mspyr1_296...   135    6e-30 
gi|120403779|ref|YP_953608.1|  putative transmembrane protein [My...   133    2e-29 
gi|145224206|ref|YP_001134884.1|  hypothetical protein Mflv_3622 ...   132    4e-29 
gi|229490329|ref|ZP_04384170.1|  conserved hypothetical protein [...  57.0    2e-06 
gi|226306973|ref|YP_002766933.1|  hypothetical protein RER_34860 ...  52.8    4e-05 
gi|257055131|ref|YP_003132963.1|  hypothetical protein Svir_10800...  46.6    0.003 
gi|258653336|ref|YP_003202492.1|  hypothetical protein Namu_3171 ...  45.4    0.006 
gi|111018055|ref|YP_701027.1|  hypothetical protein RHA1_ro01042 ...  45.1    0.007 
gi|312140071|ref|YP_004007407.1|  integral membrane protein [Rhod...  43.9    0.019 
gi|325674453|ref|ZP_08154141.1|  hypothetical protein HMPREF0724_...  43.9    0.019 
gi|256379736|ref|YP_003103396.1|  hypothetical protein Amir_5736 ...  40.8    0.15  
gi|226360182|ref|YP_002777960.1|  hypothetical protein ROP_07680 ...  39.7    0.32  
gi|333919099|ref|YP_004492680.1|  hypothetical protein AS9A_1428 ...  36.2    3.2   
gi|284030836|ref|YP_003380767.1|  hypothetical protein Kfla_2903 ...  35.8    4.6   
gi|296141899|ref|YP_003649142.1|  hypothetical protein Tpau_4235 ...  35.4    5.3   
gi|163758843|ref|ZP_02165930.1|  hypothetical protein HPDFL43_155...  35.4    5.5   
gi|291301465|ref|YP_003512743.1|  hypothetical protein Snas_3998 ...  35.0    7.5   
gi|309791378|ref|ZP_07685888.1|  patatin [Oscillochloris trichoid...  35.0    8.5   
gi|297199036|ref|ZP_06916433.1|  conserved hypothetical protein [...  34.7    9.4   


>gi|308375620|ref|ZP_07444536.2| hypothetical protein TMGG_00132 [Mycobacterium tuberculosis SUMu007]
 gi|308345678|gb|EFP34529.1| hypothetical protein TMGG_00132 [Mycobacterium tuberculosis SUMu007]
 gi|323719850|gb|EGB28963.1| transmembrane protein [Mycobacterium tuberculosis CDC1551A]
 gi|339294547|gb|AEJ46658.1| hypothetical protein CCDC5079_1468 [Mycobacterium tuberculosis 
CCDC5079]
 gi|339298183|gb|AEJ50293.1| hypothetical protein CCDC5180_1456 [Mycobacterium tuberculosis 
CCDC5180]
Length=240

 Score =  432 bits (1112),  Expect = 1e-119, Method: Compositional matrix adjust.
 Identities = 221/221 (100%), Positives = 221/221 (100%), Gaps = 0/221 (0%)

Query  1    VTEPPGFGGPSEPSGAPRTSRTRAVLFVMLGLSATGVLVGGLWAWIAPPIHAVVAITRAG  60
            VTEPPGFGGPSEPSGAPRTSRTRAVLFVMLGLSATGVLVGGLWAWIAPPIHAVVAITRAG
Sbjct  20   VTEPPGFGGPSEPSGAPRTSRTRAVLFVMLGLSATGVLVGGLWAWIAPPIHAVVAITRAG  79

Query  61   ERVHEYLGSESQNFFIAPFMLLGLLSVLAVVASALMWQWREHRGPQMVAGLSIGLTTAAA  120
            ERVHEYLGSESQNFFIAPFMLLGLLSVLAVVASALMWQWREHRGPQMVAGLSIGLTTAAA
Sbjct  80   ERVHEYLGSESQNFFIAPFMLLGLLSVLAVVASALMWQWREHRGPQMVAGLSIGLTTAAA  139

Query  121  IAAGVGALVVRLRYGALDFDTVPLSRGDHALTYVTQAPPVFFARRPLQIALTLMWPAGIA  180
            IAAGVGALVVRLRYGALDFDTVPLSRGDHALTYVTQAPPVFFARRPLQIALTLMWPAGIA
Sbjct  140  IAAGVGALVVRLRYGALDFDTVPLSRGDHALTYVTQAPPVFFARRPLQIALTLMWPAGIA  199

Query  181  SLVYALLAAGTARDDLGGYPAVDPSSNARTEALETPQAPVS  221
            SLVYALLAAGTARDDLGGYPAVDPSSNARTEALETPQAPVS
Sbjct  200  SLVYALLAAGTARDDLGGYPAVDPSSNARTEALETPQAPVS  240


>gi|15608729|ref|NP_216107.1| hypothetical protein Rv1591 [Mycobacterium tuberculosis H37Rv]
 gi|31792777|ref|NP_855270.1| hypothetical protein Mb1617 [Mycobacterium bovis AF2122/97]
 gi|121637498|ref|YP_977721.1| putative transmembrane protein [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 45 more sequence titles
 
gi|148661386|ref|YP_001282909.1| putative transmembrane protein [Mycobacterium tuberculosis H37Ra]
 gi|148822798|ref|YP_001287552.1| hypothetical protein TBFG_11607 [Mycobacterium tuberculosis F11]
 gi|167970629|ref|ZP_02552906.1| hypothetical protein MtubH3_22358 [Mycobacterium tuberculosis 
H37Ra]
 gi|224989973|ref|YP_002644660.1| putative transmembrane protein [Mycobacterium bovis BCG str. 
Tokyo 172]
 gi|254364441|ref|ZP_04980487.1| hypothetical transmembrane protein [Mycobacterium tuberculosis 
str. Haarlem]
 gi|254550594|ref|ZP_05141041.1| hypothetical protein Mtube_09057 [Mycobacterium tuberculosis 
'98-R604 INH-RIF-EM']
 gi|289447199|ref|ZP_06436943.1| transmembrane protein [Mycobacterium tuberculosis CPHL_A]
 gi|289757692|ref|ZP_06517070.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|289761739|ref|ZP_06521117.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|294996541|ref|ZP_06802232.1| hypothetical protein Mtub2_19061 [Mycobacterium tuberculosis 
210]
 gi|298525085|ref|ZP_07012494.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|306775777|ref|ZP_07414114.1| transmembrane protein [Mycobacterium tuberculosis SUMu001]
 gi|306784321|ref|ZP_07422643.1| transmembrane protein [Mycobacterium tuberculosis SUMu003]
 gi|306788689|ref|ZP_07427011.1| transmembrane protein [Mycobacterium tuberculosis SUMu004]
 gi|306793026|ref|ZP_07431328.1| transmembrane protein [Mycobacterium tuberculosis SUMu005]
 gi|306803287|ref|ZP_07439955.1| transmembrane protein [Mycobacterium tuberculosis SUMu008]
 gi|306967685|ref|ZP_07480346.1| transmembrane protein [Mycobacterium tuberculosis SUMu009]
 gi|306971884|ref|ZP_07484545.1| transmembrane protein [Mycobacterium tuberculosis SUMu010]
 gi|307079600|ref|ZP_07488770.1| transmembrane protein [Mycobacterium tuberculosis SUMu011]
 gi|339631647|ref|YP_004723289.1| hypothetical protein MAF_16030 [Mycobacterium africanum GM041182]
 gi|340626597|ref|YP_004745049.1| putative transmembrane protein [Mycobacterium canettii CIPT 140010059]
 gi|2117246|emb|CAB09078.1| PROBABLE TRANSMEMBRANE PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|31618367|emb|CAD96285.1| PROBABLE TRANSMEMBRANE PROTEIN [Mycobacterium bovis AF2122/97]
 gi|121493145|emb|CAL71616.1| Probable transmembrane protein [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|134149955|gb|EBA42000.1| hypothetical transmembrane protein [Mycobacterium tuberculosis 
str. Haarlem]
 gi|148505538|gb|ABQ73347.1| putative transmembrane protein [Mycobacterium tuberculosis H37Ra]
 gi|148721325|gb|ABR05950.1| hypothetical transmembrane protein [Mycobacterium tuberculosis 
F11]
 gi|224773086|dbj|BAH25892.1| putative transmembrane protein [Mycobacterium bovis BCG str. 
Tokyo 172]
 gi|289420157|gb|EFD17358.1| transmembrane protein [Mycobacterium tuberculosis CPHL_A]
 gi|289709245|gb|EFD73261.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|289713256|gb|EFD77268.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|298494879|gb|EFI30173.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|308215692|gb|EFO75091.1| transmembrane protein [Mycobacterium tuberculosis SUMu001]
 gi|308330869|gb|EFP19720.1| transmembrane protein [Mycobacterium tuberculosis SUMu003]
 gi|308334704|gb|EFP23555.1| transmembrane protein [Mycobacterium tuberculosis SUMu004]
 gi|308338481|gb|EFP27332.1| transmembrane protein [Mycobacterium tuberculosis SUMu005]
 gi|308349978|gb|EFP38829.1| transmembrane protein [Mycobacterium tuberculosis SUMu008]
 gi|308354615|gb|EFP43466.1| transmembrane protein [Mycobacterium tuberculosis SUMu009]
 gi|308358571|gb|EFP47422.1| transmembrane protein [Mycobacterium tuberculosis SUMu010]
 gi|308362497|gb|EFP51348.1| transmembrane protein [Mycobacterium tuberculosis SUMu011]
 gi|326903204|gb|EGE50137.1| transmembrane protein [Mycobacterium tuberculosis W-148]
 gi|339331003|emb|CCC26675.1| putative transmembrane protein [Mycobacterium africanum GM041182]
 gi|340004787|emb|CCC43931.1| putative transmembrane protein [Mycobacterium canettii CIPT 140010059]
 gi|341601516|emb|CCC64189.1| probable transmembrane protein [Mycobacterium bovis BCG str. 
Moreau RDJ]
 gi|344219411|gb|AEN00042.1| hypothetical protein MTCTRI2_1618 [Mycobacterium tuberculosis 
CTRI-2]
Length=221

 Score =  431 bits (1109),  Expect = 3e-119, Method: Compositional matrix adjust.
 Identities = 220/221 (99%), Positives = 221/221 (100%), Gaps = 0/221 (0%)

Query  1    VTEPPGFGGPSEPSGAPRTSRTRAVLFVMLGLSATGVLVGGLWAWIAPPIHAVVAITRAG  60
            +TEPPGFGGPSEPSGAPRTSRTRAVLFVMLGLSATGVLVGGLWAWIAPPIHAVVAITRAG
Sbjct  1    MTEPPGFGGPSEPSGAPRTSRTRAVLFVMLGLSATGVLVGGLWAWIAPPIHAVVAITRAG  60

Query  61   ERVHEYLGSESQNFFIAPFMLLGLLSVLAVVASALMWQWREHRGPQMVAGLSIGLTTAAA  120
            ERVHEYLGSESQNFFIAPFMLLGLLSVLAVVASALMWQWREHRGPQMVAGLSIGLTTAAA
Sbjct  61   ERVHEYLGSESQNFFIAPFMLLGLLSVLAVVASALMWQWREHRGPQMVAGLSIGLTTAAA  120

Query  121  IAAGVGALVVRLRYGALDFDTVPLSRGDHALTYVTQAPPVFFARRPLQIALTLMWPAGIA  180
            IAAGVGALVVRLRYGALDFDTVPLSRGDHALTYVTQAPPVFFARRPLQIALTLMWPAGIA
Sbjct  121  IAAGVGALVVRLRYGALDFDTVPLSRGDHALTYVTQAPPVFFARRPLQIALTLMWPAGIA  180

Query  181  SLVYALLAAGTARDDLGGYPAVDPSSNARTEALETPQAPVS  221
            SLVYALLAAGTARDDLGGYPAVDPSSNARTEALETPQAPVS
Sbjct  181  SLVYALLAAGTARDDLGGYPAVDPSSNARTEALETPQAPVS  221


>gi|254231794|ref|ZP_04925121.1| hypothetical protein TBCG_01545 [Mycobacterium tuberculosis C]
 gi|124600853|gb|EAY59863.1| hypothetical protein TBCG_01545 [Mycobacterium tuberculosis C]
Length=221

 Score =  430 bits (1106),  Expect = 6e-119, Method: Compositional matrix adjust.
 Identities = 219/221 (99%), Positives = 221/221 (100%), Gaps = 0/221 (0%)

Query  1    VTEPPGFGGPSEPSGAPRTSRTRAVLFVMLGLSATGVLVGGLWAWIAPPIHAVVAITRAG  60
            +TEPPGFGGPSEPSGAPRTSRTRAVLFVMLGLSATGVLVGGLWAWIAPPIHAVVAITRAG
Sbjct  1    MTEPPGFGGPSEPSGAPRTSRTRAVLFVMLGLSATGVLVGGLWAWIAPPIHAVVAITRAG  60

Query  61   ERVHEYLGSESQNFFIAPFMLLGLLSVLAVVASALMWQWREHRGPQMVAGLSIGLTTAAA  120
            +RVHEYLGSESQNFFIAPFMLLGLLSVLAVVASALMWQWREHRGPQMVAGLSIGLTTAAA
Sbjct  61   QRVHEYLGSESQNFFIAPFMLLGLLSVLAVVASALMWQWREHRGPQMVAGLSIGLTTAAA  120

Query  121  IAAGVGALVVRLRYGALDFDTVPLSRGDHALTYVTQAPPVFFARRPLQIALTLMWPAGIA  180
            IAAGVGALVVRLRYGALDFDTVPLSRGDHALTYVTQAPPVFFARRPLQIALTLMWPAGIA
Sbjct  121  IAAGVGALVVRLRYGALDFDTVPLSRGDHALTYVTQAPPVFFARRPLQIALTLMWPAGIA  180

Query  181  SLVYALLAAGTARDDLGGYPAVDPSSNARTEALETPQAPVS  221
            SLVYALLAAGTARDDLGGYPAVDPSSNARTEALETPQAPVS
Sbjct  181  SLVYALLAAGTARDDLGGYPAVDPSSNARTEALETPQAPVS  221


>gi|289443043|ref|ZP_06432787.1| transmembrane protein [Mycobacterium tuberculosis T46]
 gi|289569631|ref|ZP_06449858.1| transmembrane protein [Mycobacterium tuberculosis T17]
 gi|289751290|ref|ZP_06510668.1| transmembrane protein [Mycobacterium tuberculosis T92]
 gi|289753677|ref|ZP_06513055.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289415962|gb|EFD13202.1| transmembrane protein [Mycobacterium tuberculosis T46]
 gi|289543385|gb|EFD47033.1| transmembrane protein [Mycobacterium tuberculosis T17]
 gi|289691877|gb|EFD59306.1| transmembrane protein [Mycobacterium tuberculosis T92]
 gi|289694264|gb|EFD61693.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
Length=221

 Score =  429 bits (1103),  Expect = 1e-118, Method: Compositional matrix adjust.
 Identities = 219/221 (99%), Positives = 220/221 (99%), Gaps = 0/221 (0%)

Query  1    VTEPPGFGGPSEPSGAPRTSRTRAVLFVMLGLSATGVLVGGLWAWIAPPIHAVVAITRAG  60
            +TEPPGFGGPSEPSGAPRTSRTRAVLFVMLGLSATGVLVGGLWAWIAPPIHAVVAITRAG
Sbjct  1    MTEPPGFGGPSEPSGAPRTSRTRAVLFVMLGLSATGVLVGGLWAWIAPPIHAVVAITRAG  60

Query  61   ERVHEYLGSESQNFFIAPFMLLGLLSVLAVVASALMWQWREHRGPQMVAGLSIGLTTAAA  120
            ERVHEYLGSESQNFFIAPFMLLGL SVLAVVASALMWQWREHRGPQMVAGLSIGLTTAAA
Sbjct  61   ERVHEYLGSESQNFFIAPFMLLGLSSVLAVVASALMWQWREHRGPQMVAGLSIGLTTAAA  120

Query  121  IAAGVGALVVRLRYGALDFDTVPLSRGDHALTYVTQAPPVFFARRPLQIALTLMWPAGIA  180
            IAAGVGALVVRLRYGALDFDTVPLSRGDHALTYVTQAPPVFFARRPLQIALTLMWPAGIA
Sbjct  121  IAAGVGALVVRLRYGALDFDTVPLSRGDHALTYVTQAPPVFFARRPLQIALTLMWPAGIA  180

Query  181  SLVYALLAAGTARDDLGGYPAVDPSSNARTEALETPQAPVS  221
            SLVYALLAAGTARDDLGGYPAVDPSSNARTEALETPQAPVS
Sbjct  181  SLVYALLAAGTARDDLGGYPAVDPSSNARTEALETPQAPVS  221


>gi|289574258|ref|ZP_06454485.1| transmembrane protein [Mycobacterium tuberculosis K85]
 gi|289538689|gb|EFD43267.1| transmembrane protein [Mycobacterium tuberculosis K85]
Length=221

 Score =  428 bits (1100),  Expect = 3e-118, Method: Compositional matrix adjust.
 Identities = 219/221 (99%), Positives = 220/221 (99%), Gaps = 0/221 (0%)

Query  1    VTEPPGFGGPSEPSGAPRTSRTRAVLFVMLGLSATGVLVGGLWAWIAPPIHAVVAITRAG  60
            +TEPPGFGGPSEPSGAPRTSRTRAVLFVMLGLSATGVLVGGLWAWIAPPIHAVVAITRAG
Sbjct  1    MTEPPGFGGPSEPSGAPRTSRTRAVLFVMLGLSATGVLVGGLWAWIAPPIHAVVAITRAG  60

Query  61   ERVHEYLGSESQNFFIAPFMLLGLLSVLAVVASALMWQWREHRGPQMVAGLSIGLTTAAA  120
            ERVHEYLGSESQNFFIAPFMLLGLLSVLAVVASALMWQWREHRGPQMVAGLSIGLTTAAA
Sbjct  61   ERVHEYLGSESQNFFIAPFMLLGLLSVLAVVASALMWQWREHRGPQMVAGLSIGLTTAAA  120

Query  121  IAAGVGALVVRLRYGALDFDTVPLSRGDHALTYVTQAPPVFFARRPLQIALTLMWPAGIA  180
            IAAGVGALVVRLRYGALDFDTVPLSRGDHALTYVTQAPPVFFARRPLQIALTLMW AGIA
Sbjct  121  IAAGVGALVVRLRYGALDFDTVPLSRGDHALTYVTQAPPVFFARRPLQIALTLMWLAGIA  180

Query  181  SLVYALLAAGTARDDLGGYPAVDPSSNARTEALETPQAPVS  221
            SLVYALLAAGTARDDLGGYPAVDPSSNARTEALETPQAPVS
Sbjct  181  SLVYALLAAGTARDDLGGYPAVDPSSNARTEALETPQAPVS  221


>gi|253799371|ref|YP_003032372.1| hypothetical protein TBMG_02403 [Mycobacterium tuberculosis KZN 
1435]
 gi|289554635|ref|ZP_06443845.1| transmembrane protein [Mycobacterium tuberculosis KZN 605]
 gi|297634144|ref|ZP_06951924.1| hypothetical protein MtubK4_08482 [Mycobacterium tuberculosis 
KZN 4207]
 gi|297731131|ref|ZP_06960249.1| hypothetical protein MtubKR_08572 [Mycobacterium tuberculosis 
KZN R506]
 gi|313658463|ref|ZP_07815343.1| hypothetical protein MtubKV_08587 [Mycobacterium tuberculosis 
KZN V2475]
 gi|253320874|gb|ACT25477.1| transmembrane protein [Mycobacterium tuberculosis KZN 1435]
 gi|289439267|gb|EFD21760.1| transmembrane protein [Mycobacterium tuberculosis KZN 605]
 gi|328459121|gb|AEB04544.1| transmembrane protein [Mycobacterium tuberculosis KZN 4207]
Length=221

 Score =  428 bits (1100),  Expect = 3e-118, Method: Compositional matrix adjust.
 Identities = 219/221 (99%), Positives = 220/221 (99%), Gaps = 0/221 (0%)

Query  1    VTEPPGFGGPSEPSGAPRTSRTRAVLFVMLGLSATGVLVGGLWAWIAPPIHAVVAITRAG  60
            +TEPPGFGGPSE SGAPRTSRTRAVLFVMLGLSATGVLVGGLWAWIAPPIHAVVAITRAG
Sbjct  1    MTEPPGFGGPSELSGAPRTSRTRAVLFVMLGLSATGVLVGGLWAWIAPPIHAVVAITRAG  60

Query  61   ERVHEYLGSESQNFFIAPFMLLGLLSVLAVVASALMWQWREHRGPQMVAGLSIGLTTAAA  120
            ERVHEYLGSESQNFFIAPFMLLGLLSVLAVVASALMWQWREHRGPQMVAGLSIGLTTAAA
Sbjct  61   ERVHEYLGSESQNFFIAPFMLLGLLSVLAVVASALMWQWREHRGPQMVAGLSIGLTTAAA  120

Query  121  IAAGVGALVVRLRYGALDFDTVPLSRGDHALTYVTQAPPVFFARRPLQIALTLMWPAGIA  180
            IAAGVGALVVRLRYGALDFDTVPLSRGDHALTYVTQAPPVFFARRPLQIALTLMWPAGIA
Sbjct  121  IAAGVGALVVRLRYGALDFDTVPLSRGDHALTYVTQAPPVFFARRPLQIALTLMWPAGIA  180

Query  181  SLVYALLAAGTARDDLGGYPAVDPSSNARTEALETPQAPVS  221
            SLVYALLAAGTARDDLGGYPAVDPSSNARTEALETPQAPVS
Sbjct  181  SLVYALLAAGTARDDLGGYPAVDPSSNARTEALETPQAPVS  221


>gi|308369478|ref|ZP_07417925.2| hypothetical protein TMBG_00130 [Mycobacterium tuberculosis SUMu002]
 gi|308400899|ref|ZP_07493284.2| transmembrane protein [Mycobacterium tuberculosis SUMu012]
 gi|308327443|gb|EFP16294.1| hypothetical protein TMBG_00130 [Mycobacterium tuberculosis SUMu002]
 gi|308366180|gb|EFP55031.1| transmembrane protein [Mycobacterium tuberculosis SUMu012]
Length=194

 Score =  378 bits (971),  Expect = 3e-103, Method: Compositional matrix adjust.
 Identities = 193/194 (99%), Positives = 194/194 (100%), Gaps = 0/194 (0%)

Query  28   VMLGLSATGVLVGGLWAWIAPPIHAVVAITRAGERVHEYLGSESQNFFIAPFMLLGLLSV  87
            +MLGLSATGVLVGGLWAWIAPPIHAVVAITRAGERVHEYLGSESQNFFIAPFMLLGLLSV
Sbjct  1    MMLGLSATGVLVGGLWAWIAPPIHAVVAITRAGERVHEYLGSESQNFFIAPFMLLGLLSV  60

Query  88   LAVVASALMWQWREHRGPQMVAGLSIGLTTAAAIAAGVGALVVRLRYGALDFDTVPLSRG  147
            LAVVASALMWQWREHRGPQMVAGLSIGLTTAAAIAAGVGALVVRLRYGALDFDTVPLSRG
Sbjct  61   LAVVASALMWQWREHRGPQMVAGLSIGLTTAAAIAAGVGALVVRLRYGALDFDTVPLSRG  120

Query  148  DHALTYVTQAPPVFFARRPLQIALTLMWPAGIASLVYALLAAGTARDDLGGYPAVDPSSN  207
            DHALTYVTQAPPVFFARRPLQIALTLMWPAGIASLVYALLAAGTARDDLGGYPAVDPSSN
Sbjct  121  DHALTYVTQAPPVFFARRPLQIALTLMWPAGIASLVYALLAAGTARDDLGGYPAVDPSSN  180

Query  208  ARTEALETPQAPVS  221
            ARTEALETPQAPVS
Sbjct  181  ARTEALETPQAPVS  194


>gi|15841043|ref|NP_336080.1| hypothetical protein MT1626 [Mycobacterium tuberculosis CDC1551]
 gi|308374349|ref|ZP_07435709.2| hypothetical protein TMFG_00671 [Mycobacterium tuberculosis SUMu006]
 gi|61250875|sp|P0A5F3.1|Y1591_MYCTU RecName: Full=Uncharacterized protein Rv1591/MT1626
 gi|61250877|sp|P0A5F4.1|Y1617_MYCBO RecName: Full=Uncharacterized protein Mb1617
 gi|2791852|gb|AAB96963.1| unknown [Mycobacterium bovis BCG]
 gi|13881255|gb|AAK45894.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
 gi|308342214|gb|EFP31065.1| hypothetical protein TMFG_00671 [Mycobacterium tuberculosis SUMu006]
Length=193

 Score =  378 bits (970),  Expect = 3e-103, Method: Compositional matrix adjust.
 Identities = 193/193 (100%), Positives = 193/193 (100%), Gaps = 0/193 (0%)

Query  29   MLGLSATGVLVGGLWAWIAPPIHAVVAITRAGERVHEYLGSESQNFFIAPFMLLGLLSVL  88
            MLGLSATGVLVGGLWAWIAPPIHAVVAITRAGERVHEYLGSESQNFFIAPFMLLGLLSVL
Sbjct  1    MLGLSATGVLVGGLWAWIAPPIHAVVAITRAGERVHEYLGSESQNFFIAPFMLLGLLSVL  60

Query  89   AVVASALMWQWREHRGPQMVAGLSIGLTTAAAIAAGVGALVVRLRYGALDFDTVPLSRGD  148
            AVVASALMWQWREHRGPQMVAGLSIGLTTAAAIAAGVGALVVRLRYGALDFDTVPLSRGD
Sbjct  61   AVVASALMWQWREHRGPQMVAGLSIGLTTAAAIAAGVGALVVRLRYGALDFDTVPLSRGD  120

Query  149  HALTYVTQAPPVFFARRPLQIALTLMWPAGIASLVYALLAAGTARDDLGGYPAVDPSSNA  208
            HALTYVTQAPPVFFARRPLQIALTLMWPAGIASLVYALLAAGTARDDLGGYPAVDPSSNA
Sbjct  121  HALTYVTQAPPVFFARRPLQIALTLMWPAGIASLVYALLAAGTARDDLGGYPAVDPSSNA  180

Query  209  RTEALETPQAPVS  221
            RTEALETPQAPVS
Sbjct  181  RTEALETPQAPVS  193


>gi|289745972|ref|ZP_06505350.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289686500|gb|EFD53988.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
Length=184

 Score =  304 bits (779),  Expect = 5e-81, Method: Compositional matrix adjust.
 Identities = 170/185 (92%), Positives = 172/185 (93%), Gaps = 1/185 (0%)

Query  37   VLVGGLWAWIAPPIHAVVAITRAGERVHEYLGSESQNFFIAPFMLLGLLSVLAVVASALM  96
            +LVGGLW   +P      A    GERVHEYLGSESQNFFIAPFMLLGLLSVLAVVASALM
Sbjct  1    MLVGGLWRG-SPANPCRRAHHTRGERVHEYLGSESQNFFIAPFMLLGLLSVLAVVASALM  59

Query  97   WQWREHRGPQMVAGLSIGLTTAAAIAAGVGALVVRLRYGALDFDTVPLSRGDHALTYVTQ  156
            WQWREHRGPQMVAGLSIGLTTAAAIAAGVGALVVRLRYGALDFDTVPLSRGDHALTYVTQ
Sbjct  60   WQWREHRGPQMVAGLSIGLTTAAAIAAGVGALVVRLRYGALDFDTVPLSRGDHALTYVTQ  119

Query  157  APPVFFARRPLQIALTLMWPAGIASLVYALLAAGTARDDLGGYPAVDPSSNARTEALETP  216
            APPVFFARRPLQIALTLMWPAGIASLVYALLAAGTARDDLGGYPAVDPSSNARTEALETP
Sbjct  120  APPVFFARRPLQIALTLMWPAGIASLVYALLAAGTARDDLGGYPAVDPSSNARTEALETP  179

Query  217  QAPVS  221
            QAPVS
Sbjct  180  QAPVS  184


>gi|240167962|ref|ZP_04746621.1| putative transmembrane protein [Mycobacterium kansasii ATCC 12478]
Length=227

 Score =  248 bits (634),  Expect = 4e-64, Method: Compositional matrix adjust.
 Identities = 140/197 (72%), Positives = 163/197 (83%), Gaps = 0/197 (0%)

Query  12   EPSGAPRTSRTRAVLFVMLGLSATGVLVGGLWAWIAPPIHAVVAITRAGERVHEYLGSES  71
            E SG  R SR    + V+LGLS TG+++G LWAW+APPIHAVVA+TRAGERVHEYLG ES
Sbjct  23   ESSGTDRASRKSVAITVVLGLSLTGLVIGALWAWVAPPIHAVVALTRAGERVHEYLGEES  82

Query  72   QNFFIAPFMLLGLLSVLAVVASALMWQWREHRGPQMVAGLSIGLTTAAAIAAGVGALVVR  131
            QNFFIAPF++LGL  V+AVVA+ L+WQWREHRGP MV  LS+G+  AAA AA VGAL+VR
Sbjct  83   QNFFIAPFLMLGLSGVVAVVAAVLVWQWREHRGPGMVVALSVGMVGAAAAAAAVGALLVR  142

Query  132  LRYGALDFDTVPLSRGDHALTYVTQAPPVFFARRPLQIALTLMWPAGIASLVYALLAAGT  191
            LRYGALDFDTVPL+ G+HALTYVTQAPPVFF  RP  +A TL+ PA  ASLVYA++AAGT
Sbjct  143  LRYGALDFDTVPLASGEHALTYVTQAPPVFFGWRPSLVAATLLSPAATASLVYAVIAAGT  202

Query  192  ARDDLGGYPAVDPSSNA  208
            ARDDLG  PA +P+SNA
Sbjct  203  ARDDLGRCPAGEPASNA  219


>gi|254820716|ref|ZP_05225717.1| hypothetical protein MintA_12356 [Mycobacterium intracellulare 
ATCC 13950]
Length=221

 Score =  236 bits (601),  Expect = 2e-60, Method: Compositional matrix adjust.
 Identities = 122/200 (61%), Positives = 155/200 (78%), Gaps = 1/200 (0%)

Query  1    VTEPPGFGGPSEPSGAPRTSRTRAVLFVMLGLSATGVLVGGLWAWIAPPIHAVVAITRAG  60
            ++E      P+ P    R +R RA++ V  G + TG+L+G LWAWIAPPI AVVA+TR+G
Sbjct  1    MSEQANPDAPAPPVAVTRRARVRALVLVAAGSAVTGLLIGALWAWIAPPIRAVVALTRSG  60

Query  61   ERVHEYLGSESQNFFIAPFMLLGLLSVLAVVASALMWQWREHRGPQMVAGLSIGLTTAAA  120
            ERVH+YLG+ES++FF+AP ++LGLL+VLAVVAS   WQW++HRGP MV  LS+G+ TAAA
Sbjct  61   ERVHDYLGNESEHFFVAPALMLGLLTVLAVVASVWAWQWQQHRGPGMVVALSVGMLTAAA  120

Query  121  IAAGVGALVVRLRYGALDFDTVPLSRGDHALTYVTQAPPVFFARRPLQIALTLMWPAGIA  180
             AA VGA +VRL YGALDFD VPLS+   ++ YVTQAPPVFF+ RPLQIA++LMWP G+A
Sbjct  121  AAAAVGAGLVRLAYGALDFDAVPLSKSP-SVAYVTQAPPVFFSDRPLQIAVSLMWPVGVA  179

Query  181  SLVYALLAAGTARDDLGGYP  200
            +LVYA+  A  ARDDLG  P
Sbjct  180  ALVYAVRVAADARDDLGALP  199


>gi|15827622|ref|NP_301885.1| hypothetical protein ML1222 [Mycobacterium leprae TN]
 gi|221230099|ref|YP_002503515.1| hypothetical protein MLBr_01222 [Mycobacterium leprae Br4923]
 gi|18202550|sp|Q49626.1|Y1222_MYCLE RecName: Full=Uncharacterized protein ML1222
 gi|466797|gb|AAA17073.1| Lepb1170_C3_229 [Mycobacterium leprae]
 gi|13093173|emb|CAC31603.1| conserved hypothetical protein [Mycobacterium leprae]
 gi|219933206|emb|CAR71317.1| conserved hypothetical protein [Mycobacterium leprae Br4923]
Length=198

 Score =  206 bits (525),  Expect = 1e-51, Method: Compositional matrix adjust.
 Identities = 120/188 (64%), Positives = 147/188 (79%), Gaps = 1/188 (0%)

Query  11   SEPSGAPRTSRTRAVLFVMLGLSATGVLVGGLWAWIAPPIHAVVAITRAGERVHEYLGSE  70
            S+ S      R R ++ V+LGL+ TG L+GGLWAWIAPPIHAVV +TR GER H+YLG+E
Sbjct  7    SDISDVSCPPRGRVIVGVVLGLAGTGALIGGLWAWIAPPIHAVVGLTRTGERGHDYLGNE  66

Query  71   SQNFFIAPFMLLGLLSVLAVVASALMWQWREHRGPQMVAGLSIGLTTAAAIAAGVGALVV  130
            S++FF+AP ++LGLL+VLAV AS L WQ R+HRGP MV GL+IGL   AA AA VGAL+V
Sbjct  67   SEHFFVAPCLMLGLLTVLAVTASVLAWQLRQHRGPGMVIGLAIGLMICAATAAAVGALLV  126

Query  131  RLRYGALDFDTVPLSRGDHALTYVTQAPPVFFARRPLQIALTLMWPAGIASLVYALLAAG  190
             +RYGAL+FD VPLS  DH + +V QAPPVFFA   LQ+A T++WPAGIA+LVYA+LAA 
Sbjct  127  WMRYGALNFDAVPLSY-DHKVAHVIQAPPVFFAHGLLQVAATVLWPAGIAALVYAVLAAA  185

Query  191  TARDDLGG  198
              RDDLGG
Sbjct  186  NGRDDLGG  193


>gi|118617215|ref|YP_905547.1| hypothetical protein MUL_1565 [Mycobacterium ulcerans Agy99]
 gi|118569325|gb|ABL04076.1| conserved hypothetical transmembrane protein [Mycobacterium ulcerans 
Agy99]
Length=227

 Score =  204 bits (520),  Expect = 6e-51, Method: Compositional matrix adjust.
 Identities = 133/190 (70%), Positives = 158/190 (84%), Gaps = 0/190 (0%)

Query  14   SGAPRTSRTRAVLFVMLGLSATGVLVGGLWAWIAPPIHAVVAITRAGERVHEYLGSESQN  73
            SG PRTSRTRA+  VMLGL+A G+LVGGLWAW+AP +HAVVA+TR GERVH+YLGSES+N
Sbjct  23   SGGPRTSRTRAITTVMLGLTAVGLLVGGLWAWVAPAVHAVVAVTRTGERVHDYLGSESEN  82

Query  74   FFIAPFMLLGLLSVLAVVASALMWQWREHRGPQMVAGLSIGLTTAAAIAAGVGALVVRLR  133
            FF+APF++LGLL V+AVVA+  +WQWREHRGP +VA  + GL  AAA A  VGAL+V  R
Sbjct  83   FFVAPFLMLGLLGVVAVVAAVPIWQWREHRGPALVAAFAAGLVGAAAAATAVGALLVYWR  142

Query  134  YGALDFDTVPLSRGDHALTYVTQAPPVFFARRPLQIALTLMWPAGIASLVYALLAAGTAR  193
            YGALDFDTVPL+ GDH+LTYV +APPVFFAR    +A TL+ PA + SLVYAL+AAGT R
Sbjct  143  YGALDFDTVPLASGDHSLTYVIEAPPVFFARHASLVAATLLLPAAVGSLVYALMAAGTVR  202

Query  194  DDLGGYPAVD  203
            DDLGGYP V+
Sbjct  203  DDLGGYPPVE  212


>gi|333990795|ref|YP_004523409.1| hypothetical protein JDM601_2154 [Mycobacterium sp. JDM601]
 gi|333486762|gb|AEF36154.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=218

 Score =  197 bits (500),  Expect = 1e-48, Method: Compositional matrix adjust.
 Identities = 115/193 (60%), Positives = 139/193 (73%), Gaps = 3/193 (1%)

Query  10   PSEPSG--APRTSRTRAVLFVMLGLSATGVLVGGLWAWIAPPIHAVVAITRAGERVHEYL  67
            P  PSG  APR SR RA L +  GL   G+ VG LW WIAPP+H VVA+TR GERV  YL
Sbjct  4    PGAPSGHAAPRLSRRRACLILAAGLGIAGLPVGALWGWIAPPVHGVVALTRGGERVQAYL  63

Query  68   GSESQNFFIAPFMLLGLLSVLAVVASALMWQWREHRGPQMVAGLSIGLTTAAAIAAGVGA  127
            G+E+ +FF+APF+LLG+L V+AVVA+ L WQWR HRGP MVAGLS+GLT +AA+A  VG 
Sbjct  64   GNEADHFFVAPFLLLGMLGVVAVVAATLAWQWRAHRGPGMVAGLSVGLTASAALAMLVGG  123

Query  128  LVVRLRYGALDFDTVPLSRGDHALTYVTQAPPVFFARRPLQIALTLMWPAGIASLVYALL  187
             VVR RYG +D D  P+S  ++ + YV + PPVFF   PLQIA TL+ PA  A+LVY L 
Sbjct  124  AVVRHRYGVIDVDGAPVS-AENRVHYVVEGPPVFFGHTPLQIAATLLLPAATAALVYGLC  182

Query  188  AAGTARDDLGGYP  200
            A  + RDDLGGYP
Sbjct  183  ATWSTRDDLGGYP  195


>gi|342860838|ref|ZP_08717488.1| hypothetical protein MCOL_18243 [Mycobacterium colombiense CECT 
3035]
 gi|342131862|gb|EGT85119.1| hypothetical protein MCOL_18243 [Mycobacterium colombiense CECT 
3035]
Length=219

 Score =  192 bits (488),  Expect = 3e-47, Method: Compositional matrix adjust.
 Identities = 122/183 (67%), Positives = 152/183 (84%), Gaps = 1/183 (0%)

Query  18   RTSRTRAVLFVMLGLSATGVLVGGLWAWIAPPIHAVVAITRAGERVHEYLGSESQNFFIA  77
            R +RTRA+L V LG +A GV++G +WAWIAPPI AVVAITR+GERVH+YLG+ES++FF+A
Sbjct  16   RRARTRALLIVSLGSAAIGVVIGAVWAWIAPPIRAVVAITRSGERVHDYLGNESEHFFVA  75

Query  78   PFMLLGLLSVLAVVASALMWQWREHRGPQMVAGLSIGLTTAAAIAAGVGALVVRLRYGAL  137
            P +LLGLL+VLAVVAS  +WQWREHRGP MV  L+ G+  AAA+A+ VGA +VRL YGAL
Sbjct  76   PALLLGLLTVLAVVASVGVWQWREHRGPAMVVALTGGMVAAAALASAVGAGLVRLSYGAL  135

Query  138  DFDTVPLSRGDHALTYVTQAPPVFFARRPLQIALTLMWPAGIASLVYALLAAGTARDDLG  197
            DFD VPL++   ++ YVTQAPPVFF+  PLQ+A+TL+WPAGIA+LVYA+ AA  ARDDLG
Sbjct  136  DFDAVPLTK-SPSVAYVTQAPPVFFSTGPLQVAVTLLWPAGIAALVYAVRAAADARDDLG  194

Query  198  GYP  200
              P
Sbjct  195  ALP  197


>gi|183982402|ref|YP_001850693.1| hypothetical protein MMAR_2388 [Mycobacterium marinum M]
 gi|183175728|gb|ACC40838.1| conserved hypothetical transmembrane protein [Mycobacterium marinum 
M]
Length=190

 Score =  186 bits (473),  Expect = 2e-45, Method: Compositional matrix adjust.
 Identities = 125/175 (72%), Positives = 147/175 (84%), Gaps = 0/175 (0%)

Query  29   MLGLSATGVLVGGLWAWIAPPIHAVVAITRAGERVHEYLGSESQNFFIAPFMLLGLLSVL  88
            MLGL+A G+LVGGLWAW+AP +HAVVA+TR GERVH+YLGSES+NFF+APF++LGLL V+
Sbjct  1    MLGLTAVGLLVGGLWAWVAPAVHAVVAVTRTGERVHDYLGSESENFFVAPFLMLGLLGVV  60

Query  89   AVVASALMWQWREHRGPQMVAGLSIGLTTAAAIAAGVGALVVRLRYGALDFDTVPLSRGD  148
            AVVA+ L+WQWREHRGP MVA  + GL  AAA A  VGAL+V  RYGALDFDTVPL+ GD
Sbjct  61   AVVAAVLIWQWREHRGPAMVAAFAAGLVGAAAAATAVGALLVYWRYGALDFDTVPLASGD  120

Query  149  HALTYVTQAPPVFFARRPLQIALTLMWPAGIASLVYALLAAGTARDDLGGYPAVD  203
            H+LTYV +APPVFFAR    +A TL+ PA I SLVYAL+AAGT RDDLGGYP V+
Sbjct  121  HSLTYVIEAPPVFFARHASLVAATLLLPAAIGSLVYALMAAGTVRDDLGGYPPVE  175


>gi|296164456|ref|ZP_06847029.1| transmembrane protein [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295900190|gb|EFG79623.1| transmembrane protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=216

 Score =  181 bits (459),  Expect = 7e-44, Method: Compositional matrix adjust.
 Identities = 124/193 (65%), Positives = 148/193 (77%), Gaps = 5/193 (2%)

Query  30   LGLSATGVLVGGLWAWIAPPIHAVVAITRAGERVHEYLGSESQNFFIAPFMLLGLLSVLA  89
            LG +  GV VGG+WAWIAPPIHAVVA+TRAGERVH+YLG ES++FF AP +LLGLL+VLA
Sbjct  25   LGSALAGVAVGGVWAWIAPPIHAVVALTRAGERVHDYLGDESEHFFDAPCLLLGLLTVLA  84

Query  90   VVASALMWQWREHRGPQMVAGLSIGLTTAAAIAAGVGALVVRLRYGALDFDTVPLSRGDH  149
            VV + L WQWR HRGP MV  LS G+ TAAA AA  GA +VR+ YGAL+FD VPL++G  
Sbjct  85   VVVAVLAWQWRAHRGPGMVVALSTGMVTAAAAAAATGAALVRISYGALNFDAVPLAKGP-  143

Query  150  ALTYVTQAPPVFFARRPLQIALTLMWPAGIASLVYALLAAGTARDDLGGYPAVDPSSNA-  208
            ++ YV QAPPVFFA  PLQ+ALTL+WPA IA+LVYA+LAA  ARDDLG  P    SS+A 
Sbjct  144  SVAYVVQAPPVFFADNPLQVALTLLWPAAIAALVYAVLAAADARDDLGALPTGGGSSDAV  203

Query  209  ---RTEALETPQA  218
                  A E+PQ+
Sbjct  204  PVGAGGASESPQS  216


>gi|254775642|ref|ZP_05217158.1| hypothetical protein MaviaA2_13370 [Mycobacterium avium subsp. 
avium ATCC 25291]
Length=225

 Score =  166 bits (420),  Expect = 2e-39, Method: Compositional matrix adjust.
 Identities = 118/192 (62%), Positives = 145/192 (76%), Gaps = 1/192 (0%)

Query  15   GAPRTSRTRAVLFVMLGLSATGVLVGGLWAWIAPPIHAVVAITRAGERVHEYLGSESQNF  74
            G P  +  RA+L V+   +  G  +G LWAWIAPPI AVVA+TR+GERVH+YLG+ES++F
Sbjct  17   GLPGRAELRALLVVVARSAVVGASLGALWAWIAPPIRAVVALTRSGERVHDYLGNESEHF  76

Query  75   FIAPFMLLGLLSVLAVVASALMWQWREHRGPQMVAGLSIGLTTAAAIAAGVGALVVRLRY  134
            F+AP +LLGLL+VLAVVAS   WQ R HRGP MV  LS+ + TAA +AA VGA +VRLRY
Sbjct  77   FVAPTLLLGLLTVLAVVASVAAWQSRRHRGPAMVVALSVAMVTAALVAAAVGAGLVRLRY  136

Query  135  GALDFDTVPLSRGDHALTYVTQAPPVFFARRPLQIALTLMWPAGIASLVYALLAAGTARD  194
            GALDFD VPL +   ++ YV QAPPVFF+  PLQIA++LMWPAGIA+LVYA+ AA  ARD
Sbjct  137  GALDFDAVPLGK-SPSVAYVIQAPPVFFSDGPLQIAVSLMWPAGIAALVYAVRAAADARD  195

Query  195  DLGGYPAVDPSS  206
            DLG  P   P+ 
Sbjct  196  DLGALPPTAPTD  207


>gi|118462400|ref|YP_882377.1| hypothetical protein MAV_3193 [Mycobacterium avium 104]
 gi|118163687|gb|ABK64584.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=225

 Score =  162 bits (410),  Expect = 3e-38, Method: Compositional matrix adjust.
 Identities = 120/192 (63%), Positives = 147/192 (77%), Gaps = 1/192 (0%)

Query  15   GAPRTSRTRAVLFVMLGLSATGVLVGGLWAWIAPPIHAVVAITRAGERVHEYLGSESQNF  74
            G P  +  RA+L V+ G +  G  +G LWAWIAPPI AVVA+TR+GERVH+YLG+ES++F
Sbjct  17   GLPGRAELRALLVVVAGSAVVGASLGALWAWIAPPIRAVVALTRSGERVHDYLGNESEHF  76

Query  75   FIAPFMLLGLLSVLAVVASALMWQWREHRGPQMVAGLSIGLTTAAAIAAGVGALVVRLRY  134
            F+AP +LLGLL+VLAVVAS   WQ R HRGP MVA LS+ + TAA +AA VGA +VRLRY
Sbjct  77   FVAPTLLLGLLTVLAVVASVAAWQSRRHRGPGMVAALSVAMVTAALVAAAVGAGLVRLRY  136

Query  135  GALDFDTVPLSRGDHALTYVTQAPPVFFARRPLQIALTLMWPAGIASLVYALLAAGTARD  194
            GALDFD VPL +   ++ YV QAPPVFF+  PLQIA++LMWPAGIA+LVYA+ AA  ARD
Sbjct  137  GALDFDAVPLGK-SPSVAYVIQAPPVFFSDGPLQIAVSLMWPAGIAALVYAVRAAADARD  195

Query  195  DLGGYPAVDPSS  206
            DLG  P   P+ 
Sbjct  196  DLGALPPTAPTD  207


>gi|169629767|ref|YP_001703416.1| hypothetical protein MAB_2682c [Mycobacterium abscessus ATCC 
19977]
 gi|169241734|emb|CAM62762.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=262

 Score =  162 bits (410),  Expect = 3e-38, Method: Compositional matrix adjust.
 Identities = 91/187 (49%), Positives = 121/187 (65%), Gaps = 1/187 (0%)

Query  14   SGAPRTSRTRAVLFVMLGLSATGVLVGGLWAWIAPPIHAVVAITRAGERVHEYLGSESQN  73
             GAPR S   A   V  GL+ATGVLVG LW+++AP +H  +A TR   RV  +LG+++ N
Sbjct  54   EGAPRFSHIGAAAIVFGGLAATGVLVGVLWSFLAPGVHGAIADTRDNGRVFVHLGNQADN  113

Query  74   FFIAPFMLLGLLSVLAVVASALMWQWREHRGPQMVAGLSIGLTTAAAIAAGVGALVVRLR  133
            FFI   +L+G+ +V+AV+A+A  WQWR HRGP MV  L++G    +A+AAGVGA++VRLR
Sbjct  114  FFIGTTLLVGMAAVVAVIAAAAAWQWRAHRGPMMVGALTLGSLACSAVAAGVGAVLVRLR  173

Query  134  YGALDFDTVPLSRGDHALTYVTQAPPVFFARRPLQIALTLMWPAGIASLVYALLAAGTAR  193
            YGALD     L  G H + YV QAP VF+     QIA+TL     +A++VY       AR
Sbjct  174  YGALDIAGASLDAG-HRIKYVVQAPAVFYGHTEAQIAVTLALAPCLAAVVYMFCVVACAR  232

Query  194  DDLGGYP  200
            DDL  +P
Sbjct  233  DDLDAWP  239


>gi|41407383|ref|NP_960219.1| hypothetical protein MAP1285 [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|41395735|gb|AAS03602.1| hypothetical protein MAP_1285 [Mycobacterium avium subsp. paratuberculosis 
K-10]
Length=196

 Score =  162 bits (409),  Expect = 4e-38, Method: Compositional matrix adjust.
 Identities = 114/176 (65%), Positives = 137/176 (78%), Gaps = 1/176 (0%)

Query  31   GLSATGVLVGGLWAWIAPPIHAVVAITRAGERVHEYLGSESQNFFIAPFMLLGLLSVLAV  90
            G +  G L+G LWAWI PP+ AVVA+TR+GERVH+YLG+ES++FF+AP +LLGLL+VLAV
Sbjct  4    GSAVVGALLGALWAWIVPPVRAVVALTRSGERVHDYLGNESEHFFVAPTLLLGLLTVLAV  63

Query  91   VASALMWQWREHRGPQMVAGLSIGLTTAAAIAAGVGALVVRLRYGALDFDTVPLSRGDHA  150
            VAS   WQ R HRGP  VA LS+ + TAA IAA VGA +VRLRYGALDFD VPL R   +
Sbjct  64   VASVAAWQSRRHRGPATVAVLSVAMATAALIAAAVGAGLVRLRYGALDFDAVPLGR-SPS  122

Query  151  LTYVTQAPPVFFARRPLQIALTLMWPAGIASLVYALLAAGTARDDLGGYPAVDPSS  206
            + YV QAPPVFF+  PLQIA++LMWPAGIA+LVYA+ AA  ARDDLG  P   P+ 
Sbjct  123  VAYVIQAPPVFFSDGPLQIAVSLMWPAGIAALVYAVRAAADARDDLGALPPTAPTD  178


>gi|336457937|gb|EGO36928.1| Protein of unknown function (DUF2567) [Mycobacterium avium subsp. 
paratuberculosis S397]
Length=225

 Score =  161 bits (408),  Expect = 6e-38, Method: Compositional matrix adjust.
 Identities = 119/192 (62%), Positives = 145/192 (76%), Gaps = 1/192 (0%)

Query  15   GAPRTSRTRAVLFVMLGLSATGVLVGGLWAWIAPPIHAVVAITRAGERVHEYLGSESQNF  74
            G P  +  RA+L V+ G +  G L+G LWAWI PP+ AVVA+TR+GERVH+YLG+ES++F
Sbjct  17   GLPGRAELRALLVVVAGSAVVGALLGALWAWIVPPVRAVVALTRSGERVHDYLGNESEHF  76

Query  75   FIAPFMLLGLLSVLAVVASALMWQWREHRGPQMVAGLSIGLTTAAAIAAGVGALVVRLRY  134
            F+AP +LLGLL+VLAVVAS   WQ R HRGP  VA LS+ + TAA IAA VGA +VRLRY
Sbjct  77   FVAPTLLLGLLTVLAVVASVAAWQSRRHRGPATVAVLSVAMATAALIAAAVGAGLVRLRY  136

Query  135  GALDFDTVPLSRGDHALTYVTQAPPVFFARRPLQIALTLMWPAGIASLVYALLAAGTARD  194
            GALDFD VPL R   ++ YV QAPPVFF+  PLQI ++LMWPAGIA+LVYA+ AA  ARD
Sbjct  137  GALDFDAVPLGR-SPSVAYVIQAPPVFFSDGPLQIGVSLMWPAGIAALVYAVRAAADARD  195

Query  195  DLGGYPAVDPSS  206
            DLG  P   P+ 
Sbjct  196  DLGALPPTAPTD  207


>gi|108800037|ref|YP_640234.1| hypothetical protein Mmcs_3071 [Mycobacterium sp. MCS]
 gi|119869163|ref|YP_939115.1| hypothetical protein Mkms_3131 [Mycobacterium sp. KMS]
 gi|126435667|ref|YP_001071358.1| hypothetical protein Mjls_3088 [Mycobacterium sp. JLS]
 gi|108770456|gb|ABG09178.1| putative transmembrane protein [Mycobacterium sp. MCS]
 gi|119695252|gb|ABL92325.1| putative transmembrane protein [Mycobacterium sp. KMS]
 gi|126235467|gb|ABN98867.1| putative transmembrane protein [Mycobacterium sp. JLS]
Length=216

 Score =  147 bits (370),  Expect = 1e-33, Method: Compositional matrix adjust.
 Identities = 101/210 (49%), Positives = 142/210 (68%), Gaps = 7/210 (3%)

Query  16   APRTSRTRAVLFVMLGLSATGVLVGGLWAWIAPPIHAVVAITRAGERVHEYLGSESQNFF  75
            APR SR +A L V+ GL   G + G LW+ +APP+H VVA+TRAG+RV  YLG E+ +FF
Sbjct  6    APRISRRKAALTVVAGLVGAGAVTGALWSVLAPPVHGVVALTRAGDRVRAYLGGEADHFF  65

Query  76   IAPFMLLGLLSVLAVVASALMWQWREHRGPQMVAGLSIGLTTAAAIAAGVGALVVRLRYG  135
             +  + +GLLSV+ VVA+ L+WQWR HRGP +VA L+ G   AA +AAGVGA ++ +RYG
Sbjct  66   TSASLFVGLLSVVGVVAAVLLWQWRAHRGPVLVAALAAGGAAAATVAAGVGAALMHVRYG  125

Query  136  ALDFDTVPLSRGDHALTYVTQAPPVFFARRPLQIALTLMWPAGIASLVYALLAAGTARDD  195
             +D    P++  +  + YV +AP VFF   PLQIA +L++PA + +LVYA+ A  T+RDD
Sbjct  126  TIDVAGAPVTP-ERRVHYVVEAPAVFFGHTPLQIACSLVFPAAVGALVYAMCAVATSRDD  184

Query  196  LGGYPAVDPSS-NARTEALE-----TPQAP  219
            LGG+P  +    + RTE ++      PQ+P
Sbjct  185  LGGWPPQEYQPVSGRTETVDGALPVGPQSP  214


>gi|118473976|ref|YP_887510.1| hypothetical protein MSMEG_3196 [Mycobacterium smegmatis str. 
MC2 155]
 gi|118175263|gb|ABK76159.1| conserved hypothetical protein [Mycobacterium smegmatis str. 
MC2 155]
Length=225

 Score =  142 bits (358),  Expect = 3e-32, Method: Compositional matrix adjust.
 Identities = 107/220 (49%), Positives = 148/220 (68%), Gaps = 5/220 (2%)

Query  1    VTEPPGFGGPSEPSGAPRTSRTRAVLFVMLGLSATGVLVGGLWAWIAPPIHAVVAITRAG  60
            V++ P    PS P+G PR SR+RA + V+  L+  G L+G +W+ +APPIH V+A+TR+G
Sbjct  3    VSDAPAPTAPSRPAGGPRISRSRAAVIVVAALAVAGALLGVVWSVLAPPIHGVIALTRSG  62

Query  61   ERVHEYLGSESQNFFIAPFMLLGLLSVLAVVASALMWQWREHRGPQMVAGLSIGLTTAAA  120
            +R   YLG+ES +FF A FM  GLL VLA VA+  +WQWR HRGP +V  L  G   AA 
Sbjct  63   DRARAYLGAESDHFFTAAFMFTGLLVVLAAVAAVALWQWRAHRGPVLVTALVAGCAAAAG  122

Query  121  IAAGVGALVVRLRYGALDFDTVPLSRGDHALTYVTQAPPVFFARRPLQIALTLMWPAGIA  180
             AAG+GAL+V  RYG++D  + P++  ++ + YV +APPVFF   PLQIA T+++PA +A
Sbjct  123  TAAGIGALLVHGRYGSIDVASAPVT-PENRVFYVVEAPPVFFGHTPLQIATTILFPAAVA  181

Query  181  SLVYALLAAGTARDDLGGYPAVD----PSSNARTEALETP  216
            +LVYAL+A  T+RDDLG +P V+    P  N     + TP
Sbjct  182  ALVYALIAVSTSRDDLGAWPPVETPVYPPVNPHLPPMVTP  221


>gi|315444540|ref|YP_004077419.1| hypothetical protein Mspyr1_29650 [Mycobacterium sp. Spyr1]
 gi|315262843|gb|ADT99584.1| hypothetical protein Mspyr1_29650 [Mycobacterium sp. Spyr1]
Length=234

 Score =  135 bits (339),  Expect = 6e-30, Method: Compositional matrix adjust.
 Identities = 96/193 (50%), Positives = 129/193 (67%), Gaps = 1/193 (0%)

Query  11   SEPSGAPRTSRTRAVLFVMLGLSATGVLVGGLWAWIAPPIHAVVAITRAGERVHEYLGSE  70
            + P  APR SRTRA L V+ GL+A G +VG  WAW+APPI  V+A+TR G+R+   +G+E
Sbjct  2    TAPIQAPRLSRTRAALTVVAGLAAAGAVVGAAWAWLAPPIKGVIALTRTGDRIKASIGAE  61

Query  71   SQNFFIAPFMLLGLLSVLAVVASALMWQWREHRGPQMVAGLSIGLTTAAAIAAGVGALVV  130
            + N+F + F+  G+LSVLAVVA+  +WQWR HRGP M   L+ G   AAA A GVGA + 
Sbjct  62   ADNWFTSAFLFAGMLSVLAVVAAVAVWQWRSHRGPVMAGALAAGSVAAAASAGGVGAALA  121

Query  131  RLRYGALDFDTVPLSRGDHALTYVTQAPPVFFARRPLQIALTLMWPAGIASLVYALLAAG  190
            RLR+G +D    P+S     + Y+++AP VFF   P QIA TL+ PA +A+ VY L A  
Sbjct  122  RLRHGVVDIAGAPVSDAQR-VHYISEAPSVFFGHSPFQIATTLLLPAAVAATVYLLAAVA  180

Query  191  TARDDLGGYPAVD  203
              RDDLGG+P ++
Sbjct  181  CTRDDLGGWPPIE  193


>gi|120403779|ref|YP_953608.1| putative transmembrane protein [Mycobacterium vanbaalenii PYR-1]
 gi|119956597|gb|ABM13602.1| putative transmembrane protein [Mycobacterium vanbaalenii PYR-1]
Length=218

 Score =  133 bits (335),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 103/215 (48%), Positives = 143/215 (67%), Gaps = 5/215 (2%)

Query  11   SEPSGAPRTSRTRAVLFVMLGLSATGVLVGGLWAWIAPPIHAVVAITRAGERVHEYLGSE  70
            + P+ +P  SR+RA L V+ GL+A G +VG LWAW+APPI  V+A+TR+G+RV  YLG++
Sbjct  2    THPAPSPTVSRSRAALTVVAGLAAAGAVVGALWAWLAPPIRGVIALTRSGDRVKAYLGAD  61

Query  71   SQNFFIAPFMLLGLLSVLAVVASALMWQWREHRGPQMVAGLSIGLTTAAAIAAGVGALVV  130
            S ++F +  +++G+LSVLAVVA+  +WQWR HRGP M A L++G   AAA A GVGALV 
Sbjct  62   SDHWFTSAALMVGMLSVLAVVAAVWVWQWRAHRGPVMTAALAVGAVAAAATATGVGALVA  121

Query  131  RLRYGALDFDTVPLSRGDHALTYVTQAPPVFFARRPLQIALTLMWPAGIASLVYALLAAG  190
             LRYG +D    P+S     + Y+ +AP V+F   P+QIA TL++PA +A++VY   A  
Sbjct  122  HLRYGGIDMAAAPVSE-QQRVHYIVEAPSVYFGHSPVQIAATLLYPAAVAAIVYLFAAVA  180

Query  191  TARDDLGGYPAVD----PSSNARTEALETPQAPVS  221
            T RDDLG +P V     P+  + T A   P  P S
Sbjct  181  TPRDDLGAWPPVQNPVGPTGRSETTAGVPPVVPTS  215


>gi|145224206|ref|YP_001134884.1| hypothetical protein Mflv_3622 [Mycobacterium gilvum PYR-GCK]
 gi|145216692|gb|ABP46096.1| putative transmembrane protein [Mycobacterium gilvum PYR-GCK]
Length=230

 Score =  132 bits (332),  Expect = 4e-29, Method: Compositional matrix adjust.
 Identities = 96/188 (52%), Positives = 127/188 (68%), Gaps = 1/188 (0%)

Query  16   APRTSRTRAVLFVMLGLSATGVLVGGLWAWIAPPIHAVVAITRAGERVHEYLGSESQNFF  75
            APR SRTRA L V+ GL+A G +VG  WAW+APPI  V+A+TR G+R+   +G+E+ N+F
Sbjct  3    APRVSRTRAALTVVAGLAAAGAVVGAAWAWVAPPIKGVIALTRTGDRIKASIGAEADNWF  62

Query  76   IAPFMLLGLLSVLAVVASALMWQWREHRGPQMVAGLSIGLTTAAAIAAGVGALVVRLRYG  135
             + F+  G+LSVLAVVA+  +WQWR HRGP M   L+ G   AAA A GVGA + RLR+G
Sbjct  63   TSAFLFAGMLSVLAVVAAVAVWQWRSHRGPVMAGALAAGSVAAAASAGGVGAALARLRHG  122

Query  136  ALDFDTVPLSRGDHALTYVTQAPPVFFARRPLQIALTLMWPAGIASLVYALLAAGTARDD  195
             +D    P+S     + Y+++AP VFF   P QIA TL+ PA +A+ VY L A    RDD
Sbjct  123  VVDIAGAPVSDAQR-VHYISEAPSVFFGHSPFQIATTLLLPAAVAATVYLLAAVACTRDD  181

Query  196  LGGYPAVD  203
            LGG+P V+
Sbjct  182  LGGWPPVE  189


>gi|229490329|ref|ZP_04384170.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
 gi|229322619|gb|EEN88399.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
Length=196

 Score = 57.0 bits (136),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 61/216 (29%), Positives = 97/216 (45%), Gaps = 38/216 (17%)

Query  18   RTSRTRAVLFVMLGLSATGVLVGGLWAWIAPPIHAVV-----AITRAGERVHEYLGSESQ  72
            R +R R  + +   ++   VLVG LWA++AP  H +V      +   GE +H++   ++ 
Sbjct  5    RQTRLRTAIVIAATIAGVSVLVGVLWAFLAPAEHLLVVSEGRGVALTGESLHQF---DAS  61

Query  73   NFFIAPFMLLGLLSVLAVVASALMWQWREHRGPQMVAGLSIGLTTAAAIAAGVGALVVRL  132
              FI   +++G+LS +A       W  R  RGP  + GL +G    A + A VG+ V +L
Sbjct  62   AVFIWLALIVGVLSAVAA------WLARLSRGPYALGGLIVGSVAGAGLMALVGSGVTKL  115

Query  133  RYGALDFDTVPLSRGDHALTYVTQAPPVFFARRPLQIALTLMWPAGIASLVYALLAAGTA  192
            R+   D   V           + +AP V          L L++    A +V  +LA    
Sbjct  116  RFPTADNPAVG--------EIIARAPNV-------GTLLVLLFQPLAACVVTLVLAVLNP  160

Query  193  RDDLG-------GYPAV-DPSSNA-RTEALETPQAP  219
             DDLG       G P   DP+++  +TE    P+ P
Sbjct  161  YDDLGVGDHPESGDPESGDPATDTEQTEVESQPKLP  196


>gi|226306973|ref|YP_002766933.1| hypothetical protein RER_34860 [Rhodococcus erythropolis PR4]
 gi|226186090|dbj|BAH34194.1| hypothetical protein RER_34860 [Rhodococcus erythropolis PR4]
Length=196

 Score = 52.8 bits (125),  Expect = 4e-05, Method: Compositional matrix adjust.
 Identities = 61/208 (30%), Positives = 94/208 (46%), Gaps = 35/208 (16%)

Query  18   RTSRTRAVLFVMLGLSATGVLVGGLWAWIAPPIHAVV-----AITRAGERVHEYLGSESQ  72
            R +R R  + +    +   VLVG +WA++AP  H +V      +   GE +H++   ++ 
Sbjct  5    RQTRLRTAIVIAATTAGVSVLVGVVWAFLAPAEHLLVVSEGRGVALTGESLHQF---DAS  61

Query  73   NFFIAPFMLLGLLSVLAVVASALMWQWREHRGPQMVAGLSIGLTTAAAIAAGVGALVVRL  132
              FI   +++G+LS +A       W  R  RGP  + GL +G    A + A VG+ V  L
Sbjct  62   AVFIWLALIVGVLSAVAA------WLARLSRGPYALGGLIVGSAAGAGLMALVGSGVTNL  115

Query  133  RYGALDFDTVPLSRGDHALTYVTQAPPVFFARRP-LQIALTLMWPAGIASLVYALLAAGT  191
            R+   D   V    G+              AR P +   L L++    A +V  +LA   
Sbjct  116  RFPTADNPAV----GE------------IIARAPNIGTLLVLLFQPLAACVVTLVLAVLN  159

Query  192  ARDDL--GGYPAV-DPSS-NARTEALET  215
              DDL  G +P   DP S +  TEA +T
Sbjct  160  PYDDLGVGDHPESGDPESGDPATEAEQT  187


>gi|257055131|ref|YP_003132963.1| hypothetical protein Svir_10800 [Saccharomonospora viridis DSM 
43017]
 gi|256585003|gb|ACU96136.1| hypothetical protein Svir_10800 [Saccharomonospora viridis DSM 
43017]
Length=168

 Score = 46.6 bits (109),  Expect = 0.003, Method: Compositional matrix adjust.
 Identities = 56/166 (34%), Positives = 77/166 (47%), Gaps = 18/166 (10%)

Query  32   LSATGVLVGGLWAWIAPPIHAVVAITRAGERVHEYLGSESQNFFIAPFMLLGLLSVLAVV  91
            +S  G+ VG LWA +APP    V +TR G  V   L +ES + F    + L L  V  ++
Sbjct  17   ISLVGLPVGWLWALLAPPQRMRV-VTRDGRLVP--LTAESWHRFDGLAIFLLLGLVTGLL  73

Query  92   ASALMWQWREHRGPQMVAGLSIGLTTAAAIAAGVGALVVRLRYGALDFDTVPLSRGDHAL  151
               ++W  R  RGP M+ G  +G   +A +A  +G      RY   D    PL  G+   
Sbjct  74   IGVVVWLLRARRGPVMLLGTVLGSLLSAWLAMRMGVAFAEGRYPVPD----PLELGE---  126

Query  152  TYVTQAPPVFFARRPLQIALTLMWPAGIASLVYALLAAGTARDDLG  197
              V +  PV      L+ A  L+     A+  Y  LAA  ARDDLG
Sbjct  127  --VVELAPV------LETAWALVAQPLTAAFAYGTLAAWNARDDLG  164


>gi|258653336|ref|YP_003202492.1| hypothetical protein Namu_3171 [Nakamurella multipartita DSM 
44233]
 gi|258556561|gb|ACV79503.1| conserved hypothetical protein [Nakamurella multipartita DSM 
44233]
Length=173

 Score = 45.4 bits (106),  Expect = 0.006, Method: Compositional matrix adjust.
 Identities = 59/192 (31%), Positives = 84/192 (44%), Gaps = 21/192 (10%)

Query  22   TRAVLFVMLGLSATGVLVGGLWAWIAPPI-HAVVAITRAGERVHEYLGSESQNFFIAPFM  80
            TRA   V++G  A GVL G LWA++AP + + V+A  R G      L S +   F+A  +
Sbjct  2    TRAARVVLIGAGAAGVLQGLLWAFLAPGVPYKVLADGRYGA-----LPSTTSYHFVALAL  56

Query  81   LLGLLSVLAVVASALMWQWREHRGPQMVAGLSIGLTTAAAIAAGVGALVVRLRYGALDFD  140
               L  ++ V+ + L W+ R  RG  M+  +       + IA G+G L+           
Sbjct  57   FCWLGIIVGVLTAVLAWRARTSRGWPMLLTVVGASFAGSLIAWGLGRLIAP--------G  108

Query  141  TVPLSRGDHALTYVTQAPPVFFARRPLQIALTLMWPAGIASLVYALLAAGTARDDLGGYP  200
            T P S G  A   +  + P         I   L  P   A+LVY  L A   R DL   P
Sbjct  109  TDPASVGASAADSIVVSAP-----STGTILAVLAQPVA-AALVYTFLVAWNGRPDL-SVP  161

Query  201  AVDPSSNARTEA  212
            A  P ++ R  A
Sbjct  162  ATPPPADCRQSA  173


>gi|111018055|ref|YP_701027.1| hypothetical protein RHA1_ro01042 [Rhodococcus jostii RHA1]
 gi|110817585|gb|ABG92869.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=243

 Score = 45.1 bits (105),  Expect = 0.007, Method: Compositional matrix adjust.
 Identities = 50/182 (28%), Positives = 75/182 (42%), Gaps = 29/182 (15%)

Query  21   RTRAVLFVMLGLSATGVLVGGLWAWIAPPIHAVV-----AITRAGERVHEYLGSESQNFF  75
            R R+   +  G      L G LW  +APP H +V      ++  GE VH +   ++   F
Sbjct  66   RLRSAAGIFCGTVVASALAGVLWGVLAPPEHLLVVAPDRGVSLTGESVHRF---DAIGMF  122

Query  76   IAPFMLLGLLSVLAVVASALMWQWREHRGPQMVAGLSIGLTTAAAIAAGVGALVVRLRYG  135
                +++G+L+ +A       W  R  RGP  +  +  G    A + A  G  V  LR+ 
Sbjct  123  ACAGLVVGILTAVAA------WTARRSRGPVALGAVLAGSVVGAGVMALGGIGVAALRFP  176

Query  136  ALDFDTVPLSRGDHALTYVTQAPPVFFARRPLQIALTLMWPAGIASLVYALLAAGTARDD  195
              D  T        A T V  AP +          L L++   +A +V  +LAA    DD
Sbjct  177  DPDTST--------AGTVVAVAPGI-------GTQLVLIFQPLVACVVTLVLAALNPYDD  221

Query  196  LG  197
            LG
Sbjct  222  LG  223


>gi|312140071|ref|YP_004007407.1| integral membrane protein [Rhodococcus equi 103S]
 gi|311889410|emb|CBH48727.1| putative integral membrane protein [Rhodococcus equi 103S]
Length=170

 Score = 43.9 bits (102),  Expect = 0.019, Method: Compositional matrix adjust.
 Identities = 34/99 (35%), Positives = 52/99 (53%), Gaps = 4/99 (4%)

Query  36   GVLVGGLWAWIAPPIHAVVAITRAGERVHEYLGSESQNFFIAPFMLLGLLSVLAVVASAL  95
            GV  G +WA +AP +H +V     G      L +E+ + F A  + +G   V+ V+++ +
Sbjct  6    GVPAGLIWALLAPAVHMLVVAEDRGV----VLTTENLHRFDALAIFVGTTIVVGVLSAVV  61

Query  96   MWQWREHRGPQMVAGLSIGLTTAAAIAAGVGALVVRLRY  134
            +W  R  RGP  +A L  G    + +AA VG  V RLRY
Sbjct  62   VWGMRRSRGPGAMAALVCGSVAGSGVAALVGMGVARLRY  100


>gi|325674453|ref|ZP_08154141.1| hypothetical protein HMPREF0724_11923 [Rhodococcus equi ATCC 
33707]
 gi|325554713|gb|EGD24387.1| hypothetical protein HMPREF0724_11923 [Rhodococcus equi ATCC 
33707]
Length=199

 Score = 43.9 bits (102),  Expect = 0.019, Method: Compositional matrix adjust.
 Identities = 37/110 (34%), Positives = 58/110 (53%), Gaps = 9/110 (8%)

Query  25   VLFVMLGLSATGVLVGGLWAWIAPPIHAVVAITRAGERVHEYLGSESQNFFIAPFMLLGL  84
            V+ V+LG+ A     G +WA +AP +H +V     G      L +E+ + F A  + +G 
Sbjct  6    VVSVLLGVPA-----GMIWALLAPAVHMLVVAEDRGV----VLTTENLHRFDALAIFVGT  56

Query  85   LSVLAVVASALMWQWREHRGPQMVAGLSIGLTTAAAIAAGVGALVVRLRY  134
              V+ V+++ ++W  R  RGP  +A L  G    + +AA VG  V RLRY
Sbjct  57   TIVVGVLSAVVVWGMRRSRGPGAMAALVCGSVAGSGVAALVGMGVGRLRY  106


>gi|256379736|ref|YP_003103396.1| hypothetical protein Amir_5736 [Actinosynnema mirum DSM 43827]
 gi|255924039|gb|ACU39550.1| hypothetical protein Amir_5736 [Actinosynnema mirum DSM 43827]
Length=431

 Score = 40.8 bits (94),  Expect = 0.15, Method: Compositional matrix adjust.
 Identities = 54/179 (31%), Positives = 72/179 (41%), Gaps = 30/179 (16%)

Query  24   AVLFVMLGLSATGVLVGGLWAWIAPPIHAVVA----ITRAGERVHEYLGSESQNFFIAPF  79
            A + V    S  G+ +G LWAW+AP  + VV     +   GE  H        +  +  F
Sbjct  274  AAIKVFSTTSLLGLPIGLLWAWLAPAQNVVVQSGGFVPVPGESYHRL-----DSLMV--F  326

Query  80   MLLGLLSVLAVVASALMWQWREHRGPQMVAGLSIGLTTAAAIAAGVGALVVRLRYGALDF  139
            +LLGL +   V+     W  RE RGP ++   ++G   AA +A  V A            
Sbjct  327  VLLGLAA--GVLTGTGSWMMRELRGPVVMLAATVGSVLAAFLAFRVSA------------  372

Query  140  DTVPLSRGDHALTYVTQAPPVFFARRPLQIALTLM-WPAGIASLVYALLAAGTARDDLG  197
               P S   H L        V      L  A  ++ WP G A L Y  LAA    DDLG
Sbjct  373  ---PFSTWRHELASAPVVGEVIRLAPSLDSAWGIVAWPLGTA-LAYGCLAAWNGMDDLG  427


>gi|226360182|ref|YP_002777960.1| hypothetical protein ROP_07680 [Rhodococcus opacus B4]
 gi|226238667|dbj|BAH49015.1| hypothetical membrane protein [Rhodococcus opacus B4]
Length=185

 Score = 39.7 bits (91),  Expect = 0.32, Method: Compositional matrix adjust.
 Identities = 46/165 (28%), Positives = 69/165 (42%), Gaps = 29/165 (17%)

Query  38   LVGGLWAWIAPPIHAVV-----AITRAGERVHEYLGSESQNFFIAPFMLLGLLSVLAVVA  92
            L G LW  +APP H +V      ++  GE VH +   ++   F    +++G+L+ +A   
Sbjct  25   LAGVLWGLLAPPEHLLVVAPDRGVSLTGESVHRF---DAIGMFACAGLVVGILTAVAA--  79

Query  93   SALMWQWREHRGPQMVAGLSIGLTTAAAIAAGVGALVVRLRYGALDFDTVPLSRGDHALT  152
                W  R  RGP  +  +  G    A + A  G  V  LR+   D  T        A  
Sbjct  80   ----WTARRSRGPVALGAVLGGSVVGACVMALGGIGVAALRFPDADTST--------AGA  127

Query  153  YVTQAPPVFFARRPLQIALTLMWPAGIASLVYALLAAGTARDDLG  197
             V  AP +          L L++   +A +V  +LAA    DDLG
Sbjct  128  VVAIAPGI-------GTPLVLIFQPLVACVVTLVLAALNPYDDLG  165


>gi|333919099|ref|YP_004492680.1| hypothetical protein AS9A_1428 [Amycolicicoccus subflavus DQS3-9A1]
 gi|333481320|gb|AEF39880.1| Hypothetical membrane protein [Amycolicicoccus subflavus DQS3-9A1]
Length=190

 Score = 36.2 bits (82),  Expect = 3.2, Method: Compositional matrix adjust.
 Identities = 50/177 (29%), Positives = 75/177 (43%), Gaps = 22/177 (12%)

Query  46   IAPPIHAVVAITRAGERVHEYLGSESQNFFIAPFMLLGLLSVLAVVASALMWQWREHRGP  105
            +APP   V  IT  G+ +   L  ++ + F +  + +G+ +V   +  A +W  R  RGP
Sbjct  22   LAPPARYV--ITDQGQAL---LPGDNLHLFDSLAIFVGVSAVAGAICGAAVWVMRRRRGP  76

Query  106  QMVAGLSIGLTTAAAIAAGVGALVVRLRYGALDFDTVPLSRGDHALTYVTQAPPVFFARR  165
              V  L  G    AAIAA +G ++  LR        VP    D  +  V+  P V   + 
Sbjct  77   AAVLMLVGGSGLGAAIAALLGGVLAELR--------VPDPFDDSGVAIVSLPPEVTAWQ-  127

Query  166  PLQIALTLMWPAGIASLVYALLAAGTARD-DLGGYPAVDPSSNARTEALETPQAPVS  221
                   L++   +A  VY  +AAG + D DLG      P      E +  P   VS
Sbjct  128  ------ALIFQPLVAVFVY-FIAAGVSSDPDLGVSEGASPGGPQGGELVSDPVPGVS  177


>gi|284030836|ref|YP_003380767.1| hypothetical protein Kfla_2903 [Kribbella flavida DSM 17836]
 gi|283810129|gb|ADB31968.1| hypothetical protein Kfla_2903 [Kribbella flavida DSM 17836]
Length=227

 Score = 35.8 bits (81),  Expect = 4.6, Method: Compositional matrix adjust.
 Identities = 36/126 (29%), Positives = 53/126 (43%), Gaps = 13/126 (10%)

Query  7    FGGPSEPSGAPRTSRTRAVLFVMLGLSATGVLVGGLWAWIAPPIHAVVAITRAGERVHEY  66
            +G P  P  AP+   +RA+   +      G + G  W   AP     V      +     
Sbjct  42   YGAPPVP--APKLPWSRAIAVTVAVFLVAGAIAGWAWQQFAPLAQYTV------DENGGA  93

Query  67   LGSESQNFFIAP---FMLLGLLSVLAVVASALMWQWREHRGPQMVAGLSIGLTTAAAIAA  123
            LG +       P   ++ +G L+ L V+  AL W W    GP  V  +S+G    AA+A 
Sbjct  94   LGEQQMTRVFGPDGMYVSIGFLTAL-VLGGALFW-WLRDYGPWAVGVVSVGALIGAAVAW  151

Query  124  GVGALV  129
            GVG L+
Sbjct  152  GVGMLL  157


>gi|296141899|ref|YP_003649142.1| hypothetical protein Tpau_4235 [Tsukamurella paurometabola DSM 
20162]
 gi|296030033|gb|ADG80803.1| conserved hypothetical protein [Tsukamurella paurometabola DSM 
20162]
Length=239

 Score = 35.4 bits (80),  Expect = 5.3, Method: Compositional matrix adjust.
 Identities = 29/97 (30%), Positives = 42/97 (44%), Gaps = 12/97 (12%)

Query  127  ALVVRLRYGALDFDTVPLSRGD--HALTYVTQAPPVFFARRPLQIALTLMWPAGIASLVY  184
            ++  ++  GA    T PL+  D    + + T AP   + R  L+++  L W AG+   + 
Sbjct  149  SVAAQIDCGACGCKTAPLTDADFLERMGFETVAPHHRYPRMRLELSEGLGWKAGVEHALE  208

Query  185  ALLAAGTARDDLGGYPAVDPSSNARTEALETPQAPVS  221
             LLAAGTA   L              E  E P APV 
Sbjct  209  QLLAAGTAEAAL----------REALEGTEDPAAPVC  235


>gi|163758843|ref|ZP_02165930.1| hypothetical protein HPDFL43_15507 [Hoeflea phototrophica DFL-43]
 gi|162284133|gb|EDQ34417.1| hypothetical protein HPDFL43_15507 [Hoeflea phototrophica DFL-43]
Length=259

 Score = 35.4 bits (80),  Expect = 5.5, Method: Compositional matrix adjust.
 Identities = 21/58 (37%), Positives = 31/58 (54%), Gaps = 4/58 (6%)

Query  84   LLSVLAVVASALMWQWREHRGPQ----MVAGLSIGLTTAAAIAAGVGALVVRLRYGAL  137
            LL +L V+ +  +W WR+H  P     MV G  IG+T   A AA +   ++RL  G +
Sbjct  50   LLPILIVMDAVTLWSWRKHWDPATLLIMVPGAVIGITIGWATAAWITDPIIRLIVGCV  107


>gi|291301465|ref|YP_003512743.1| hypothetical protein Snas_3998 [Stackebrandtia nassauensis DSM 
44728]
 gi|290570685|gb|ADD43650.1| hypothetical protein Snas_3998 [Stackebrandtia nassauensis DSM 
44728]
Length=253

 Score = 35.0 bits (79),  Expect = 7.5, Method: Compositional matrix adjust.
 Identities = 35/113 (31%), Positives = 49/113 (44%), Gaps = 20/113 (17%)

Query  32   LSATGVLVGGLWAWIAPPIHAVV-----AITRAGERVHEYLGSESQNFFIAPFMLLGLLS  86
            L+  G  +G LW  +AP +  V      A T   E   +Y+G +        F LLGL +
Sbjct  63   LTVLGFPLGALWNLLAPRVEMVRVDGGWAFTE--ENPEQYMGDD------GVFALLGLGA  114

Query  87   VLAVVASALMWQWREHRGPQMVAGLSIGLTTAAAIAAGVGALVVRLRYGALDF  139
             +  VA  L   WR  RGP M+ GL +G      +A   G      R+G  D+
Sbjct  115  GI-TVALVLWLGWRSRRGPLMLTGLVLGSILCQTVAWRFG------RFGRDDY  160


>gi|309791378|ref|ZP_07685888.1| patatin [Oscillochloris trichoides DG6]
 gi|308226585|gb|EFO80303.1| patatin [Oscillochloris trichoides DG6]
Length=379

 Score = 35.0 bits (79),  Expect = 8.5, Method: Compositional matrix adjust.
 Identities = 20/47 (43%), Positives = 29/47 (62%), Gaps = 2/47 (4%)

Query  100  REHRGPQMVAGLSIGLTTAAAIAAGVGALVVRLRYGALDFDTVPLSR  146
            R+ +GP ++AG SIG   AAA+A+G+G  V RLR   +   T  + R
Sbjct  40   RDGQGPDIIAGTSIGAINAAALASGLG--VARLRQIWMQMHTEDVHR  84


>gi|297199036|ref|ZP_06916433.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
 gi|197716009|gb|EDY60043.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
Length=230

 Score = 34.7 bits (78),  Expect = 9.4, Method: Compositional matrix adjust.
 Identities = 27/99 (28%), Positives = 46/99 (47%), Gaps = 0/99 (0%)

Query  28   VMLGLSATGVLVGGLWAWIAPPIHAVVAITRAGERVHEYLGSESQNFFIAPFMLLGLLSV  87
            +M+ ++  G L+G LW W+AP +  V  +   G  V     +E +        L  L   
Sbjct  57   IMVAVALAGALLGVLWWWLAPHVPLVGDVDEQGSWVVYLKDTEGEQAVGVDGTLTLLALA  116

Query  88   LAVVASALMWQWREHRGPQMVAGLSIGLTTAAAIAAGVG  126
               V++  ++ WR   G  +V GL++G   A+ +A  VG
Sbjct  117  FGFVSALAVFLWRRRGGVPLVVGLAVGGVLASLLAWRVG  155



Lambda     K      H
   0.321    0.136    0.416 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 276581767512


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40