BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv1610

Length=235
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15608748|ref|NP_216126.1|  hypothetical protein Rv1610 [Mycoba...   448    3e-124
gi|289757712|ref|ZP_06517090.1|  conserved hypothetical protein [...   446    1e-123
gi|340626616|ref|YP_004745068.1|  hypothetical protein MCAN_16181...   445    3e-123
gi|167970649|ref|ZP_02552926.1|  hypothetical protein MtubH3_2245...   420    1e-115
gi|306788708|ref|ZP_07427030.1|  conserved membrane protein [Myco...   355    3e-96 
gi|296164477|ref|ZP_06847049.1|  conserved hypothetical protein [...   255    4e-66 
gi|4883461|emb|CAB43178.1|  putative membrane protein [Mycobacter...   233    2e-59 
gi|15827652|ref|NP_301915.1|  hypothetical protein ML1270 [Mycoba...   233    2e-59 
gi|118617235|ref|YP_905567.1|  hypothetical protein MUL_1590 [Myc...   231    7e-59 
gi|240167986|ref|ZP_04746645.1|  hypothetical protein MkanA1_0163...   224    7e-57 
gi|183982426|ref|YP_001850717.1|  hypothetical protein MMAR_2412 ...   218    5e-55 
gi|342860819|ref|ZP_08717469.1|  hypothetical protein MCOL_18148 ...   208    6e-52 
gi|254820960|ref|ZP_05225961.1|  hypothetical protein MintA_13580...   200    2e-49 
gi|254775623|ref|ZP_05217139.1|  hypothetical protein MaviaA2_132...   195    5e-48 
gi|118462802|ref|YP_882359.1|  hypothetical protein MAV_3176 [Myc...   194    6e-48 
gi|336457890|gb|EGO36883.1|  trp region conserved hypothetical me...   189    4e-46 
gi|108800018|ref|YP_640215.1|  hypothetical protein Mmcs_3052 [My...   163    2e-38 
gi|126435647|ref|YP_001071338.1|  hypothetical protein Mjls_3068 ...   162    5e-38 
gi|118468315|ref|YP_887532.1|  hypothetical protein MSMEG_3218 [M...   155    3e-36 
gi|333990774|ref|YP_004523388.1|  hypothetical protein JDM601_213...   150    1e-34 
gi|169629731|ref|YP_001703380.1|  hypothetical protein MAB_2646c ...   143    2e-32 
gi|41407402|ref|NP_960238.1|  hypothetical protein MAP1304 [Mycob...   126    3e-27 
gi|120403799|ref|YP_953628.1|  hypothetical protein Mvan_2815 [My...   122    4e-26 
gi|145224185|ref|YP_001134863.1|  hypothetical protein Mflv_3601 ...   116    3e-24 
gi|326382633|ref|ZP_08204324.1|  hypothetical protein SCNU_06835 ...   101    1e-19 
gi|262202842|ref|YP_003274050.1|  hypothetical protein Gbro_2949 ...  92.4    5e-17 
gi|296139753|ref|YP_003646996.1|  trp region hypothetical protein...  82.4    5e-14 
gi|343926614|ref|ZP_08766113.1|  hypothetical protein GOALK_066_0...  80.1    2e-13 
gi|260578035|ref|ZP_05845958.1|  membrane protein [Corynebacteriu...  71.2    1e-10 
gi|68535871|ref|YP_250576.1|  hypothetical protein jk0796 [Coryne...  69.7    3e-10 
gi|226360155|ref|YP_002777933.1|  hypothetical protein ROP_07410 ...  68.6    7e-10 
gi|333919125|ref|YP_004492706.1|  membrane protein [Amycolicicocc...  62.8    4e-08 
gi|172040846|ref|YP_001800560.1|  hypothetical protein cur_1166 [...  62.0    8e-08 
gi|340794176|ref|YP_004759639.1|  hypothetical protein CVAR_1210 ...  60.8    1e-07 
gi|336325393|ref|YP_004605359.1|  hypothetical protein CRES_0839 ...  59.3    4e-07 
gi|25028548|ref|NP_738602.1|  hypothetical protein CE1992 [Coryne...  58.9    6e-07 
gi|255325291|ref|ZP_05366397.1|  trp region conserved hypothetica...  58.2    9e-07 
gi|111018028|ref|YP_701000.1|  hypothetical protein RHA1_ro01015 ...  57.4    2e-06 
gi|300858772|ref|YP_003783755.1|  hypothetical protein cpfrc_0135...  56.2    4e-06 
gi|262184430|ref|ZP_06043851.1|  hypothetical protein CaurA7_1059...  56.2    4e-06 
gi|54023827|ref|YP_118069.1|  hypothetical protein nfa18590 [Noca...  55.8    5e-06 
gi|19553289|ref|NP_601291.1|  hypothetical protein NCgl2011 [Cory...  55.5    6e-06 
gi|227503331|ref|ZP_03933380.1|  conserved hypothetical protein [...  54.7    1e-05 
gi|227833439|ref|YP_002835146.1|  hypothetical protein cauri_1615...  54.7    1e-05 
gi|227504742|ref|ZP_03934791.1|  conserved hypothetical protein [...  54.7    1e-05 
gi|344044762|gb|EGV40437.1|  hypothetical protein CgS9114_07636 [...  54.3    1e-05 
gi|38234131|ref|NP_939898.1|  hypothetical protein DIP1556 [Coryn...  53.9    2e-05 
gi|334697190|gb|AEG81987.1|  putative membrane protein [Corynebac...  53.9    2e-05 
gi|337291078|ref|YP_004630099.1|  hypothetical protein CULC22_014...  53.5    2e-05 
gi|306836430|ref|ZP_07469406.1|  conserved hypothetical protein [...  53.5    3e-05 


>gi|15608748|ref|NP_216126.1| hypothetical protein Rv1610 [Mycobacterium tuberculosis H37Rv]
 gi|15841063|ref|NP_336100.1| hypothetical protein MT1645 [Mycobacterium tuberculosis CDC1551]
 gi|31792796|ref|NP_855289.1| hypothetical protein Mb1636 [Mycobacterium bovis AF2122/97]
 44 more sequence titles
 Length=235

 Score =  448 bits (1153),  Expect = 3e-124, Method: Compositional matrix adjust.
 Identities = 234/235 (99%), Positives = 235/235 (100%), Gaps = 0/235 (0%)

Query  1    VAANAGSVRPNRRARPMIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGA  60
            +AANAGSVRPNRRARPMIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGA
Sbjct  1    MAANAGSVRPNRRARPMIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGA  60

Query  61   SWSTALLPLALLMLAAAVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGA  120
            SWSTALLPLALLMLAAAVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGA
Sbjct  61   SWSTALLPLALLMLAAAVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGA  120

Query  121  DLAHVPVVTLVGSARHYWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRAR  180
            DLAHVPVVTLVGSARHYWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRAR
Sbjct  121  DLAHVPVVTLVGSARHYWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRAR  180

Query  181  RSIARRQHSNAAGRAAPQDDGPDMGPRMSERMIWEALDEGRDPTDREQESDTEGR  235
            RSIARRQHSNAAGRAAPQDDGPDMGPRMSERMIWEALDEGRDPTDREQESDTEGR
Sbjct  181  RSIARRQHSNAAGRAAPQDDGPDMGPRMSERMIWEALDEGRDPTDREQESDTEGR  235


>gi|289757712|ref|ZP_06517090.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|289713276|gb|EFD77288.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
Length=235

 Score =  446 bits (1147),  Expect = 1e-123, Method: Compositional matrix adjust.
 Identities = 233/235 (99%), Positives = 234/235 (99%), Gaps = 0/235 (0%)

Query  1    VAANAGSVRPNRRARPMIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGA  60
            +AANAGSVRPNRRARPMIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGA
Sbjct  1    MAANAGSVRPNRRARPMIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGA  60

Query  61   SWSTALLPLALLMLAAAVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGA  120
            SWSTAL PLALLMLAAAVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGA
Sbjct  61   SWSTALRPLALLMLAAAVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGA  120

Query  121  DLAHVPVVTLVGSARHYWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRAR  180
            DLAHVPVVTLVGSARHYWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRAR
Sbjct  121  DLAHVPVVTLVGSARHYWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRAR  180

Query  181  RSIARRQHSNAAGRAAPQDDGPDMGPRMSERMIWEALDEGRDPTDREQESDTEGR  235
            RSIARRQHSNAAGRAAPQDDGPDMGPRMSERMIWEALDEGRDPTDREQESDTEGR
Sbjct  181  RSIARRQHSNAAGRAAPQDDGPDMGPRMSERMIWEALDEGRDPTDREQESDTEGR  235


>gi|340626616|ref|YP_004745068.1| hypothetical protein MCAN_16181 [Mycobacterium canettii CIPT 
140010059]
 gi|340004806|emb|CCC43950.1| putative conserved membrane protein [Mycobacterium canettii CIPT 
140010059]
Length=235

 Score =  445 bits (1144),  Expect = 3e-123, Method: Compositional matrix adjust.
 Identities = 232/235 (99%), Positives = 233/235 (99%), Gaps = 0/235 (0%)

Query  1    VAANAGSVRPNRRARPMIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGA  60
            +AANAGSVRPNRRARPMIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGA
Sbjct  1    MAANAGSVRPNRRARPMIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGA  60

Query  61   SWSTALLPLALLMLAAAVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGA  120
            SWSTALLPLALLMLAAAVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGA
Sbjct  61   SWSTALLPLALLMLAAAVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGA  120

Query  121  DLAHVPVVTLVGSARHYWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRAR  180
            DLAHVPVVTLVGSARHYWGAVAAVLAAVCALL AVFLM SAAIRGSAGEDMARYAAPRAR
Sbjct  121  DLAHVPVVTLVGSARHYWGAVAAVLAAVCALLGAVFLMRSAAIRGSAGEDMARYAAPRAR  180

Query  181  RSIARRQHSNAAGRAAPQDDGPDMGPRMSERMIWEALDEGRDPTDREQESDTEGR  235
            RSIARRQHSNAAGRAAPQDDGPDMGPRMSERMIWEALDEGRDPTDREQESDTEGR
Sbjct  181  RSIARRQHSNAAGRAAPQDDGPDMGPRMSERMIWEALDEGRDPTDREQESDTEGR  235


>gi|167970649|ref|ZP_02552926.1| hypothetical protein MtubH3_22458 [Mycobacterium tuberculosis 
H37Ra]
 gi|254550613|ref|ZP_05141060.1| hypothetical protein Mtube_09152 [Mycobacterium tuberculosis 
'98-R604 INH-RIF-EM']
 gi|297634163|ref|ZP_06951943.1| hypothetical protein MtubK4_08577 [Mycobacterium tuberculosis 
KZN 4207]
 27 more sequence titles
 Length=219

 Score =  420 bits (1079),  Expect = 1e-115, Method: Compositional matrix adjust.
 Identities = 219/219 (100%), Positives = 219/219 (100%), Gaps = 0/219 (0%)

Query  17   MIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLMLAA  76
            MIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLMLAA
Sbjct  1    MIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLMLAA  60

Query  77   AVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGADLAHVPVVTLVGSARH  136
            AVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGADLAHVPVVTLVGSARH
Sbjct  61   AVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGADLAHVPVVTLVGSARH  120

Query  137  YWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRARRSIARRQHSNAAGRAA  196
            YWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRARRSIARRQHSNAAGRAA
Sbjct  121  YWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRARRSIARRQHSNAAGRAA  180

Query  197  PQDDGPDMGPRMSERMIWEALDEGRDPTDREQESDTEGR  235
            PQDDGPDMGPRMSERMIWEALDEGRDPTDREQESDTEGR
Sbjct  181  PQDDGPDMGPRMSERMIWEALDEGRDPTDREQESDTEGR  219


>gi|306788708|ref|ZP_07427030.1| conserved membrane protein [Mycobacterium tuberculosis SUMu004]
 gi|308334723|gb|EFP23574.1| conserved membrane protein [Mycobacterium tuberculosis SUMu004]
Length=201

 Score =  355 bits (911),  Expect = 3e-96, Method: Compositional matrix adjust.
 Identities = 189/189 (100%), Positives = 189/189 (100%), Gaps = 0/189 (0%)

Query  17   MIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLMLAA  76
            MIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLMLAA
Sbjct  1    MIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLMLAA  60

Query  77   AVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGADLAHVPVVTLVGSARH  136
            AVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGADLAHVPVVTLVGSARH
Sbjct  61   AVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGADLAHVPVVTLVGSARH  120

Query  137  YWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRARRSIARRQHSNAAGRAA  196
            YWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRARRSIARRQHSNAAGRAA
Sbjct  121  YWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRARRSIARRQHSNAAGRAA  180

Query  197  PQDDGPDMG  205
            PQDDGPDMG
Sbjct  181  PQDDGPDMG  189


>gi|296164477|ref|ZP_06847049.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
 gi|295900175|gb|EFG79609.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
Length=229

 Score =  255 bits (651),  Expect = 4e-66, Method: Compositional matrix adjust.
 Identities = 150/231 (65%), Positives = 171/231 (75%), Gaps = 10/231 (4%)

Query  9    RPNRRARPMIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLP  68
            RPNRRAR  +G+AQ+LLV +A ALW A+RLPWVVI SFD LGPP+EVTL+GASWSTALLP
Sbjct  5    RPNRRARVAVGVAQVLLVGSAAALWAASRLPWVVIRSFDGLGPPREVTLSGASWSTALLP  64

Query  69   LALLMLAAAVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGADLAHVPVV  128
            LA+LMLA AVAA+AVRGWPLR LA LLA AS AVGYLGISLW +PDVA RGADLAHV V+
Sbjct  65   LAVLMLATAVAAIAVRGWPLRVLAGLLAVASLAVGYLGISLWALPDVAVRGADLAHVTVM  124

Query  129  TLVGSARHYWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRARRSIARRQH  188
            +LVGS R Y GA  AV AA C L+AAV L+ SA    SA     +YAAP  RRS A R  
Sbjct  125  SLVGSERRYTGAGVAVGAAACTLVAAVLLLRSAGDSKSARLSAEKYAAPATRRSNALRDD  184

Query  189  SNAAGRAAPQDDGPDMGPRMSERMIWEALDEG----RDPTDREQESDTEGR  235
            ++ A    P        P M+ERM+W+ALDEG    RDPTDR + SDTEGR
Sbjct  185  ADGAMLEQPGT------PEMTERMLWDALDEGSDPTRDPTDRPRGSDTEGR  229


>gi|4883461|emb|CAB43178.1| putative membrane protein [Mycobacterium leprae]
Length=264

 Score =  233 bits (593),  Expect = 2e-59, Method: Compositional matrix adjust.
 Identities = 151/228 (67%), Positives = 171/228 (75%), Gaps = 12/228 (5%)

Query  8    VRPNRRARPMIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALL  67
            ++  R  R  I IAQLLLVVAAGALWMAARLPWVVI SFD LGPPKEV L+GASWS  LL
Sbjct  5    IKSARAGRLTIQIAQLLLVVAAGALWMAARLPWVVIRSFDGLGPPKEVALSGASWSAVLL  64

Query  68   PLALLMLAAAVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGADLAHVPV  127
            PLALLMLAA VAA+AVRGWPLR LA LLA ASF VGYLG+SLWV+PDV  RGA LAHV +
Sbjct  65   PLALLMLAATVAAIAVRGWPLRVLAGLLAVASFLVGYLGVSLWVLPDVTVRGAVLAHVSL  124

Query  128  VTLVGSARHYWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRARRSIARRQ  187
            ++LVGS RH+ GA AAV A+ C L+AAV LM SA++ GSA +  ++Y  P  RRSIARR 
Sbjct  125  LSLVGSQRHHLGAGAAVAASGCTLIAAVLLMRSASVIGSARQGTSKYVVPAQRRSIARR-  183

Query  188  HSNAAGRAAPQDDGPDMGPRMSERMIWEALDEGRDPTDREQESDTEGR  235
              + A  A  Q         MSERMIW+ALDE RDPTDR +E DTEGR
Sbjct  184  --DGAATAISQ---------MSERMIWDALDEDRDPTDRLREPDTEGR  220


>gi|15827652|ref|NP_301915.1| hypothetical protein ML1270 [Mycobacterium leprae TN]
 gi|221230129|ref|YP_002503545.1| hypothetical protein MLBr_01270 [Mycobacterium leprae Br4923]
 gi|13093203|emb|CAC31651.1| possible conserved membrane protein [Mycobacterium leprae]
 gi|219933236|emb|CAR71365.1| possible conserved membrane protein [Mycobacterium leprae Br4923]
Length=265

 Score =  233 bits (593),  Expect = 2e-59, Method: Compositional matrix adjust.
 Identities = 151/228 (67%), Positives = 171/228 (75%), Gaps = 12/228 (5%)

Query  8    VRPNRRARPMIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALL  67
            ++  R  R  I IAQLLLVVAAGALWMAARLPWVVI SFD LGPPKEV L+GASWS  LL
Sbjct  6    IKSARAGRLTIQIAQLLLVVAAGALWMAARLPWVVIRSFDGLGPPKEVALSGASWSAVLL  65

Query  68   PLALLMLAAAVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGADLAHVPV  127
            PLALLMLAA VAA+AVRGWPLR LA LLA ASF VGYLG+SLWV+PDV  RGA LAHV +
Sbjct  66   PLALLMLAATVAAIAVRGWPLRVLAGLLAVASFLVGYLGVSLWVLPDVTVRGAVLAHVSL  125

Query  128  VTLVGSARHYWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRARRSIARRQ  187
            ++LVGS RH+ GA AAV A+ C L+AAV LM SA++ GSA +  ++Y  P  RRSIARR 
Sbjct  126  LSLVGSQRHHLGAGAAVAASGCTLIAAVLLMRSASVIGSARQGTSKYVVPAQRRSIARR-  184

Query  188  HSNAAGRAAPQDDGPDMGPRMSERMIWEALDEGRDPTDREQESDTEGR  235
              + A  A  Q         MSERMIW+ALDE RDPTDR +E DTEGR
Sbjct  185  --DGAATAISQ---------MSERMIWDALDEDRDPTDRLREPDTEGR  221


>gi|118617235|ref|YP_905567.1| hypothetical protein MUL_1590 [Mycobacterium ulcerans Agy99]
 gi|118569345|gb|ABL04096.1| conserved hypothetical membrane protein [Mycobacterium ulcerans 
Agy99]
Length=231

 Score =  231 bits (589),  Expect = 7e-59, Method: Compositional matrix adjust.
 Identities = 151/227 (67%), Positives = 172/227 (76%), Gaps = 4/227 (1%)

Query  9    RPNRRARPMIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLP  68
            R  R +R MIGIAQLLLV++AG LW+A+RL WVVI SFD LGPPKEVTL+GA+WSTALLP
Sbjct  9    RARRNSRLMIGIAQLLLVISAGVLWIASRLGWVVIRSFDGLGPPKEVTLSGATWSTALLP  68

Query  69   LALLMLAAAVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGADLAHVPVV  128
            +ALLMLAAAVAALAVRGWPLR LA LLA  S AVGYLG+SLWV+PDVA RGA+LA V V+
Sbjct  69   MALLMLAAAVAALAVRGWPLRGLAALLAMVSLAVGYLGVSLWVIPDVALRGAELAQVSVI  128

Query  129  TLVGSARHYWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRARRSIARRQH  188
            TLVGS RHY GA  AV A VC L AA  LM  A+I  S G++  +YA P +RRS+AR Q 
Sbjct  129  TLVGSGRHYVGAGLAVGAVVCTLAAAALLMRLASIVESLGDNATKYATPASRRSVARAQD  188

Query  189  SNAAGRAAPQDDGPDMGPRMSERMIWEALDEGRDPTDREQESDTEGR  235
            +  A   A +    D    MSER IW+ALDEGRDPTDR  E DTEGR
Sbjct  189  AAIATEKASKSAELD----MSERTIWDALDEGRDPTDRPPEPDTEGR  231


>gi|240167986|ref|ZP_04746645.1| hypothetical protein MkanA1_01630 [Mycobacterium kansasii ATCC 
12478]
Length=219

 Score =  224 bits (571),  Expect = 7e-57, Method: Compositional matrix adjust.
 Identities = 156/233 (67%), Positives = 178/233 (77%), Gaps = 17/233 (7%)

Query  4    NAGSVRPNR-RARPMIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASW  62
            +AG  R  R  +R MIG+AQLLLV+AAGALW A+RLPWV I SFD LGPP++V LTGA+W
Sbjct  3    DAGPGRSRRLTSRLMIGMAQLLLVIAAGALWAASRLPWVGIRSFDGLGPPRQVILTGATW  62

Query  63   STALLPLALLMLAAAVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGADL  122
            STALLP+A+L+LAAAVAALAVRGWPLR LA LLAA SFAVGYLGISLWV+PDVAARGA+L
Sbjct  63   STALLPVAMLLLAAAVAALAVRGWPLRVLAALLAATSFAVGYLGISLWVIPDVAARGAEL  122

Query  123  AHVPVVTLVGSARHYWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRARRS  182
            AHVP+  LVGS R+YWGA  AV AAVC L+AA  L+ SA+I GSA     +YA P AR++
Sbjct  123  AHVPLTALVGSGRYYWGAAVAVGAAVCILMAAAVLLRSASIAGSAHPGPTKYAGPAARQA  182

Query  183  IARRQHSNAAGRAAPQDDGPDMGPRMSERMIWEALDEGRDPTDREQESDTEGR  235
             ARR            DDGP     MSERMIW+ALD G DPTDR Q SDTEGR
Sbjct  183  TARR-----------DDDGP-----MSERMIWDALDHGVDPTDRPQGSDTEGR  219


>gi|183982426|ref|YP_001850717.1| hypothetical protein MMAR_2412 [Mycobacterium marinum M]
 gi|183175752|gb|ACC40862.1| conserved hypothetical membrane protein [Mycobacterium marinum 
M]
Length=215

 Score =  218 bits (555),  Expect = 5e-55, Method: Compositional matrix adjust.
 Identities = 150/219 (69%), Positives = 171/219 (79%), Gaps = 4/219 (1%)

Query  17   MIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLMLAA  76
            MIGIAQLLLV++AG LW+A+RL WVVI SFD LGPPKEVTL+GA+WSTALLP+ALLMLAA
Sbjct  1    MIGIAQLLLVISAGVLWIASRLGWVVIRSFDGLGPPKEVTLSGATWSTALLPMALLMLAA  60

Query  77   AVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGADLAHVPVVTLVGSARH  136
            AVAALAVRGWPLR LA LLA  S AVGYLG+SLWV+PDVA RGA+LA V V+TLVGS RH
Sbjct  61   AVAALAVRGWPLRGLAALLAMVSLAVGYLGVSLWVIPDVALRGAELAQVSVITLVGSGRH  120

Query  137  YWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRARRSIARRQHSNAAGRAA  196
            Y GA  AV AAVC L AA  LM SA+I  S G++  +YA+P +RRS+AR Q +  A   A
Sbjct  121  YVGAGLAVGAAVCTLAAAALLMRSASIVESLGDNATKYASPASRRSVARAQDAAIATEKA  180

Query  197  PQDDGPDMGPRMSERMIWEALDEGRDPTDREQESDTEGR  235
             +    D    MSER IW+ALDEGRDPTDR  E DTEGR
Sbjct  181  SKSAELD----MSERTIWDALDEGRDPTDRPPEPDTEGR  215


>gi|342860819|ref|ZP_08717469.1| hypothetical protein MCOL_18148 [Mycobacterium colombiense CECT 
3035]
 gi|342131843|gb|EGT85100.1| hypothetical protein MCOL_18148 [Mycobacterium colombiense CECT 
3035]
Length=227

 Score =  208 bits (529),  Expect = 6e-52, Method: Compositional matrix adjust.
 Identities = 152/233 (66%), Positives = 178/233 (77%), Gaps = 11/233 (4%)

Query  3    ANAGSVRPNRRARPMIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASW  62
            A AG+ RPN  +R +I IAQ +LV+AAG LW+A+RLPWVVI SFD LGPPK+VTL GA+W
Sbjct  6    AGAGTRRPN--SRWLIRIAQAVLVIAAGTLWLASRLPWVVIRSFDGLGPPKQVTLAGAAW  63

Query  63   STALLPLALLMLAAAVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGADL  122
            STALLPLALL+LAAAVAA+AVRGW LRALA LLA  S AVGYLG+SLWV+PDVA RGA+L
Sbjct  64   STALLPLALLLLAAAVAAIAVRGWLLRALAGLLAVVSLAVGYLGVSLWVLPDVAVRGAEL  123

Query  123  AHVPVVTLVGSARHYWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRARRS  182
            AHV V++LVGS R Y GA   V AA C L+AAV LM SA+  GS     ++YAAP  RRS
Sbjct  124  AHVSVMSLVGSERLYGGAGVTVAAAACTLIAAVLLMRSASDSGST---RSKYAAPATRRS  180

Query  183  IARRQHSNAAGRAAPQDDGPDMGPRMSERMIWEALDEGRDPTDREQESDTEGR  235
            IARR+ ++ A     +       P MSERMIW+ALDEGRDPTDR  ESD+EGR
Sbjct  181  IARREEADGAMLEQAET------PGMSERMIWDALDEGRDPTDRPNESDSEGR  227


>gi|254820960|ref|ZP_05225961.1| hypothetical protein MintA_13580 [Mycobacterium intracellulare 
ATCC 13950]
Length=226

 Score =  200 bits (508),  Expect = 2e-49, Method: Compositional matrix adjust.
 Identities = 151/222 (69%), Positives = 170/222 (77%), Gaps = 12/222 (5%)

Query  17   MIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLMLAA  76
            +I IAQ  LVVAAGALW A+RLPWVVI SFD LGPPKEVTL+G +WSTALLPLA+L+LAA
Sbjct  14   LIRIAQATLVVAAGALWAASRLPWVVIRSFDGLGPPKEVTLSGGAWSTALLPLAMLLLAA  73

Query  77   AVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGADLAHVPVVTLVGSARH  136
            AVAA+AVRGWPLRALA LLA AS AVGYLG+SLWV+PDVA RGA+LAHV V++LVGS R 
Sbjct  74   AVAAIAVRGWPLRALAGLLALASLAVGYLGVSLWVLPDVAVRGAELAHVSVMSLVGSERR  133

Query  137  YWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRARRSIARRQHSNAA---G  193
            YWGA   V AA CAL+AAV LM SA+  GSA     +Y  P  RRSIARR  ++ A   G
Sbjct  134  YWGAGVTVAAAACALIAAVLLMRSASDSGSARSSAIKYTTPATRRSIARRDDASGAMLEG  193

Query  194  RAAPQDDGPDMGPRMSERMIWEALDEGRDPTDREQESDTEGR  235
            R  P+         MSERMIW+ALDEGRDPTD   ESDTEGR
Sbjct  194  RQTPE---------MSERMIWDALDEGRDPTDAPSESDTEGR  226


>gi|254775623|ref|ZP_05217139.1| hypothetical protein MaviaA2_13273 [Mycobacterium avium subsp. 
avium ATCC 25291]
Length=226

 Score =  195 bits (495),  Expect = 5e-48, Method: Compositional matrix adjust.
 Identities = 144/221 (66%), Positives = 164/221 (75%), Gaps = 6/221 (2%)

Query  15   RPMIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLML  74
            R +I IAQLLLV+AA  LW+AARLPWVVI SFD LGPPK VTL+G +WSTALLPLALL+L
Sbjct  12   RWLIRIAQLLLVIAAVGLWVAARLPWVVIRSFDGLGPPKAVTLSGGTWSTALLPLALLLL  71

Query  75   AAAVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGADLAHVPVVTLVGSA  134
            AAAVAA+AVRGW LRALA LLA AS AVGYLG+SLWV+PDVA RG +LAH+ V++LVGS 
Sbjct  72   AAAVAAIAVRGWLLRALAGLLAVASLAVGYLGVSLWVLPDVAVRGTELAHLSVISLVGSE  131

Query  135  RHYWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRARRSIARRQHSNAAGR  194
            R Y GA   V AA   L+AAV LM SA+   SA     +YA P  RRSI RR  ++ A  
Sbjct  132  RRYLGAGITVAAAALTLIAAVLLMRSASDPKSARSSALKYATPATRRSITRRNAADGAML  191

Query  195  AAPQDDGPDMGPRMSERMIWEALDEGRDPTDREQESDTEGR  235
              P+       P MSERMIW+ALDEGRDPTDR   SDTEGR
Sbjct  192  EQPET------PEMSERMIWDALDEGRDPTDRPSGSDTEGR  226


>gi|118462802|ref|YP_882359.1| hypothetical protein MAV_3176 [Mycobacterium avium 104]
 gi|118164089|gb|ABK64986.1| trp region conserved hypothetical membrane protein [Mycobacterium 
avium 104]
Length=226

 Score =  194 bits (494),  Expect = 6e-48, Method: Compositional matrix adjust.
 Identities = 144/221 (66%), Positives = 163/221 (74%), Gaps = 6/221 (2%)

Query  15   RPMIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLML  74
            R +I IAQLLLV+AA  LW+AARLPWVVI SFD LGPPK VTL+G +WSTALLPLALL+L
Sbjct  12   RWLIRIAQLLLVIAAVGLWVAARLPWVVIRSFDGLGPPKAVTLSGGTWSTALLPLALLLL  71

Query  75   AAAVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGADLAHVPVVTLVGSA  134
            AAAVAA+AVRGW LRALA LLA AS AVGYLG+SLW VPDVA RG +LAH+ V++LVGS 
Sbjct  72   AAAVAAIAVRGWLLRALAGLLAVASLAVGYLGVSLWAVPDVAVRGTELAHLSVISLVGSE  131

Query  135  RHYWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRARRSIARRQHSNAAGR  194
            R Y GA   V AA   L+AAV LM SA+   SA     +YA P  RRSI RR  ++ A  
Sbjct  132  RRYLGAGITVAAAALTLIAAVLLMRSASDPKSARSSAMKYATPATRRSITRRNAADGAML  191

Query  195  AAPQDDGPDMGPRMSERMIWEALDEGRDPTDREQESDTEGR  235
              P+       P MSERMIW+ALDEGRDPTDR   SDTEGR
Sbjct  192  EQPET------PEMSERMIWDALDEGRDPTDRPSGSDTEGR  226


>gi|336457890|gb|EGO36883.1| trp region conserved hypothetical membrane protein [Mycobacterium 
avium subsp. paratuberculosis S397]
Length=226

 Score =  189 bits (479),  Expect = 4e-46, Method: Compositional matrix adjust.
 Identities = 142/221 (65%), Positives = 162/221 (74%), Gaps = 6/221 (2%)

Query  15   RPMIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLML  74
            R +I IAQLLLV+AA  LW+AARLPWVVI SFD LGPPK VTL+G +WSTALLPLALL+L
Sbjct  12   RWLIRIAQLLLVIAAVGLWVAARLPWVVIRSFDGLGPPKAVTLSGGTWSTALLPLALLLL  71

Query  75   AAAVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGADLAHVPVVTLVGSA  134
            AAAVAA+AVRGW LRALA LLA AS AVGYLG+SLWV+ DVA RG +LAH+ V++LVGS 
Sbjct  72   AAAVAAIAVRGWLLRALAGLLAVASLAVGYLGVSLWVLSDVAVRGTELAHLSVISLVGSE  131

Query  135  RHYWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRARRSIARRQHSNAAGR  194
            R Y GA   V AA   L+AAV LM SA+   SA     +YA P  RRSI RR  ++ A  
Sbjct  132  RRYLGAGITVAAAALTLIAAVLLMRSASDPKSARSSAMKYATPATRRSITRRNAADGAML  191

Query  195  AAPQDDGPDMGPRMSERMIWEALDEGRDPTDREQESDTEGR  235
               +       P MSERMIW+ALDEGRDPTDR   SDTEGR
Sbjct  192  EQLET------PEMSERMIWDALDEGRDPTDRPSGSDTEGR  226


>gi|108800018|ref|YP_640215.1| hypothetical protein Mmcs_3052 [Mycobacterium sp. MCS]
 gi|119869143|ref|YP_939095.1| hypothetical protein Mkms_3111 [Mycobacterium sp. KMS]
 gi|108770437|gb|ABG09159.1| Trp region conserved hypothetical membrane protein [Mycobacterium 
sp. MCS]
 gi|119695232|gb|ABL92305.1| trp region conserved hypothetical membrane protein [Mycobacterium 
sp. KMS]
Length=198

 Score =  163 bits (412),  Expect = 2e-38, Method: Compositional matrix adjust.
 Identities = 125/219 (58%), Positives = 151/219 (69%), Gaps = 21/219 (9%)

Query  17   MIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLMLAA  76
            M  IAQL+LV+ A  LW+A+RL WV + SFD LG PK  TLTGA W+TAL+PLALL+LAA
Sbjct  1    MTRIAQLVLVLGAAVLWVASRLTWVEVRSFDGLGQPKTSTLTGAEWATALIPLALLVLAA  60

Query  77   AVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGADLAHVPVVTLVGSARH  136
            AVA LAVRGWPLR LAVL+AAAS  + YL I+LWV+ DVA R A+LA VPV  L G+ RH
Sbjct  61   AVAVLAVRGWPLRILAVLVAAASAGMAYLAITLWVIVDVAPRAANLAEVPVADLTGTERH  120

Query  137  YWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRARRSIARRQHSNAAGRAA  196
            + GAV  ++AA   L  AV LM  AA++G+ G   +RYAAP ARR+ A +Q         
Sbjct  121  FTGAVLTLVAAALVLAGAVLLM-RAAVKGTGG--TSRYAAPSARRATATKQE--------  169

Query  197  PQDDGPDMGPRMSERMIWEALDEGRDPTDREQESDTEGR  235
                  D G  MSERM+W+ALDEG DPTDR    DT+GR
Sbjct  170  ------DKGEPMSERMLWDALDEGHDPTDR----DTKGR  198


>gi|126435647|ref|YP_001071338.1| hypothetical protein Mjls_3068 [Mycobacterium sp. JLS]
 gi|126235447|gb|ABN98847.1| trp region conserved hypothetical membrane protein [Mycobacterium 
sp. JLS]
Length=198

 Score =  162 bits (409),  Expect = 5e-38, Method: Compositional matrix adjust.
 Identities = 125/219 (58%), Positives = 150/219 (69%), Gaps = 21/219 (9%)

Query  17   MIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLMLAA  76
            M  IAQL+LV+ A  LW+A+RL WV + SFD LG PK  TLTGA W+TAL+PLALL+LAA
Sbjct  1    MTRIAQLVLVLGAAVLWVASRLTWVEVRSFDGLGQPKTSTLTGAEWATALIPLALLVLAA  60

Query  77   AVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGADLAHVPVVTLVGSARH  136
            AVA LAVRGWPLR LAVL+AAAS  + YL I+LWV+ DVA R A+LA VPV  L G+ RH
Sbjct  61   AVAVLAVRGWPLRILAVLVAAASAGMAYLAITLWVIVDVAPRAANLAEVPVADLTGTERH  120

Query  137  YWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRARRSIARRQHSNAAGRAA  196
            + GAV  ++AA   L  AV LM  AA++G+ G   +RYAAP ARR+ A  Q         
Sbjct  121  FTGAVLTLVAAALVLAGAVLLM-RAAVKGTGG--TSRYAAPSARRATATEQE--------  169

Query  197  PQDDGPDMGPRMSERMIWEALDEGRDPTDREQESDTEGR  235
                  D G  MSERM+W+ALDEG DPTDR    DT+GR
Sbjct  170  ------DKGEPMSERMLWDALDEGHDPTDR----DTKGR  198


>gi|118468315|ref|YP_887532.1| hypothetical protein MSMEG_3218 [Mycobacterium smegmatis str. 
MC2 155]
 gi|118169602|gb|ABK70498.1| trp region conserved hypothetical membrane protein [Mycobacterium 
smegmatis str. MC2 155]
Length=204

 Score =  155 bits (393),  Expect = 3e-36, Method: Compositional matrix adjust.
 Identities = 106/203 (53%), Positives = 124/203 (62%), Gaps = 17/203 (8%)

Query  32   LWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLMLAAAVAALAVRGWPLRAL  91
            LW A+R  WV + SFD LG PK   LTGASWSTAL+PLALL LAAAVAALAVRGW LR L
Sbjct  16   LWGASRFNWVEVRSFDGLGQPKTTALTGASWSTALIPLALLALAAAVAALAVRGWMLRLL  75

Query  92   AVLLAAASFAVGYLGISLWVVPDVAARGADLAHVPVVTLVGSARHYWGAVAAVLAAVCAL  151
            A+L+AAAS  +GYL ISLW V DVA R ADLA VPV  L G+ R+Y GAV  + AAVC L
Sbjct  76   AILVAAASAGMGYLAISLWAVRDVAVRAADLALVPVAQLTGTHRYYTGAVITLAAAVCTL  135

Query  152  LAAVFLMSSAAIRGSAGEDMARYAAPRARRSIARRQHSNAAGRAAPQDDGPDMGPRMSER  211
            + AV LM SA    +  +                 QH  ++               MSER
Sbjct  136  VGAVLLMRSA----NGSQRAVAARYAAPAARRTAAQHDVSS-------------ESMSER  178

Query  212  MIWEALDEGRDPTDREQESDTEG  234
            MIW+ALDEG DPT  + ++D  G
Sbjct  179  MIWDALDEGHDPTGDQDDTDRRG  201


>gi|333990774|ref|YP_004523388.1| hypothetical protein JDM601_2134 [Mycobacterium sp. JDM601]
 gi|333486742|gb|AEF36134.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=215

 Score =  150 bits (380),  Expect = 1e-34, Method: Compositional matrix adjust.
 Identities = 120/228 (53%), Positives = 153/228 (68%), Gaps = 18/228 (7%)

Query  8    VRPNRRARPMIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALL  67
            VR  +RA   + +AQLLLV+AAG LW AARLPWV+I SFD LG PK++T++GASWSTAL+
Sbjct  6    VRGGKRA---LRVAQLLLVLAAGGLWGAARLPWVLIRSFDGLGQPKDITVSGASWSTALV  62

Query  68   PLALLMLAAAVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGADLAHVPV  127
            PLA + LAAAVAA+AVRGW LR LAVL+AA S A GYL +S+WVV DVA R  D+A +P+
Sbjct  63   PLAWVCLAAAVAAVAVRGWKLRVLAVLMAAVSLAAGYLAVSMWVVRDVALRALDIAEIPL  122

Query  128  VTLVGSARHYWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRARRSIARRQ  187
             +L+ + R   GAV ++LAA+  L AA  LM +AA   +   D A+Y  P ARR++ R  
Sbjct  123  TSLLAADRRLTGAVLSLLAALGVLAAAALLMRAAAHHTN---DNAKYETPAARRAVTRDA  179

Query  188  HSNAAGRAAPQDDGPDMGPRMSERMIWEALDEGRDPTDREQESDTEGR  235
             + A              P MSERM+W+ALDEG DPT+       EGR
Sbjct  180  DAAAG------------TPEMSERMMWDALDEGCDPTEPPPGPAAEGR  215


>gi|169629731|ref|YP_001703380.1| hypothetical protein MAB_2646c [Mycobacterium abscessus ATCC 
19977]
 gi|169241698|emb|CAM62726.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=205

 Score =  143 bits (360),  Expect = 2e-32, Method: Compositional matrix adjust.
 Identities = 102/216 (48%), Positives = 138/216 (64%), Gaps = 24/216 (11%)

Query  9    RPNRRARPMIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLP  68
             P RR R ++G    LLV+AAGALW+A++  WV + SFD LG P+ + ++GA WS AL+P
Sbjct  8    NPGRR-RLLMGAG--LLVIAAGALWVASKFSWVRLRSFDGLGEPRTLLVSGADWSAALVP  64

Query  69   LALLMLAAAVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGADLAHVPVV  128
            LA+ ++AAA+A LAVRGW LR LAVL+A    A  YLG+SLW V DV  R A++ +V V 
Sbjct  65   LAVALIAAAIATLAVRGWALRVLAVLVAIIGAAAAYLGVSLWAVRDVGPRAAEVKNVAVS  124

Query  129  TLVGSARHYWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRARRSIARRQH  188
            TLVG+ R   GA+ AVLAAV ++LAA+ L+     R + G   ++Y  P ARRS A    
Sbjct  125  TLVGADRLSGGAITAVLAAVVSVLAAITLL-----RAARGASASKYQTPAARRSEA----  175

Query  189  SNAAGRAAPQDDGPDMGPRMSERMIWEALDEGRDPT  224
                   +P D G       SER++W++LD+G DPT
Sbjct  176  ------VSPVDKG------QSERVMWDSLDDGHDPT  199


>gi|41407402|ref|NP_960238.1| hypothetical protein MAP1304 [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|41395754|gb|AAS03621.1| hypothetical protein MAP_1304 [Mycobacterium avium subsp. paratuberculosis 
K-10]
Length=143

 Score =  126 bits (316),  Expect = 3e-27, Method: Compositional matrix adjust.
 Identities = 94/127 (75%), Positives = 107/127 (85%), Gaps = 0/127 (0%)

Query  14   ARPMIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLM  73
             R +I IAQLLLV+AA  LW+AARLPWVVI SFD LGPPK VTL+G +WSTALLPLALL+
Sbjct  11   GRWLIRIAQLLLVIAAVGLWVAARLPWVVIRSFDGLGPPKAVTLSGGTWSTALLPLALLL  70

Query  74   LAAAVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGADLAHVPVVTLVGS  133
            LAAAVAA+AVRGW LRALA LLA AS AVGYLG+SLWV+ DVA RG +LAH+ V++LVGS
Sbjct  71   LAAAVAAIAVRGWLLRALAGLLAVASLAVGYLGVSLWVLSDVAVRGTELAHLSVISLVGS  130

Query  134  ARHYWGA  140
             R Y GA
Sbjct  131  ERRYLGA  137


>gi|120403799|ref|YP_953628.1| hypothetical protein Mvan_2815 [Mycobacterium vanbaalenii PYR-1]
 gi|119956617|gb|ABM13622.1| trp region conserved hypothetical membrane protein [Mycobacterium 
vanbaalenii PYR-1]
Length=193

 Score =  122 bits (307),  Expect = 4e-26, Method: Compositional matrix adjust.
 Identities = 107/200 (54%), Positives = 127/200 (64%), Gaps = 26/200 (13%)

Query  36   ARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLMLAAAVAALAVRGWPLRALAVLL  95
            +RL WV I SFD LG PK   L+GA+WSTAL+PLALL+LAAA AALAVRGWPLR LAVL+
Sbjct  20   SRLTWVQITSFDGLGQPKTADLSGATWSTALIPLALLVLAAAGAALAVRGWPLRVLAVLV  79

Query  96   AAASFAVGYLGISLWVVPDVAARGADLAHVPVVTLVGSARHYWGAVAAVLAAVCALLAAV  155
            AAAS  +GYL ISLWV+ D A R A LA VPV  L+ + RHY GA   ++A V +L  AV
Sbjct  80   AAASAGMGYLAISLWVMADDAVRAARLADVPVADLLDTQRHYGGAGVTLVAGVLSLAGAV  139

Query  156  FLMSSAAIRGSAGEDMARYAAPRARRSIARRQHSNAAGRAAPQDDGPDMGPRMSERMIWE  215
             LM SA  R +   + ARY          RR  + +  RAA           MSERMIW+
Sbjct  140  LLMRSATHRRA---EAARY---------TRRTPAESDTRAAA----------MSERMIWD  177

Query  216  ALDEGRDPTDREQESDTEGR  235
            ALDEG DPT+     D +GR
Sbjct  178  ALDEGHDPTN----PDNQGR  193


>gi|145224185|ref|YP_001134863.1| hypothetical protein Mflv_3601 [Mycobacterium gilvum PYR-GCK]
 gi|315444520|ref|YP_004077399.1| hypothetical protein Mspyr1_29450 [Mycobacterium sp. Spyr1]
 gi|145216671|gb|ABP46075.1| trp region conserved hypothetical membrane protein [Mycobacterium 
gilvum PYR-GCK]
 gi|315262823|gb|ADT99564.1| trp region conserved hypothetical membrane protein [Mycobacterium 
sp. Spyr1]
Length=193

 Score =  116 bits (290),  Expect = 3e-24, Method: Compositional matrix adjust.
 Identities = 110/200 (55%), Positives = 131/200 (66%), Gaps = 26/200 (13%)

Query  36   ARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLMLAAAVAALAVRGWPLRALAVLL  95
            +R+ WV I SFD LG PK   L+G++WSTAL+PLALL+LAAAVAALAVRGWPLR LAVL+
Sbjct  20   SRMTWVQISSFDGLGQPKTTDLSGSTWSTALVPLALLILAAAVAALAVRGWPLRILAVLV  79

Query  96   AAASFAVGYLGISLWVVPDVAARGADLAHVPVVTLVGSARHYWGAVAAVLAAVCALLAAV  155
            AAAS  +GYL ISLWVV DVA R A LA VPV  L+ + R Y GAV  ++AA  +L+ AV
Sbjct  80   AAASAGMGYLAISLWVVADVAVRAARLAEVPVADLLDTQRDYVGAVITLIAAALSLVGAV  139

Query  156  FLMSSAAIRGSAGEDMARYAAPRARRSIARRQHSNAAGRAAPQDDGPDMGPRMSERMIWE  215
             +M SAA RG A  + ARY     RR               P  + P     MSERMIW+
Sbjct  140  VMMRSAA-RGRA--ETARY----TRR---------------PAAEAPTEASAMSERMIWD  177

Query  216  ALDEGRDPTDREQESDTEGR  235
            ALDEGRDPT+     D +GR
Sbjct  178  ALDEGRDPTN----PDNKGR  193


>gi|326382633|ref|ZP_08204324.1| hypothetical protein SCNU_06835 [Gordonia neofelifaecis NRRL 
B-59395]
 gi|326198752|gb|EGD55935.1| hypothetical protein SCNU_06835 [Gordonia neofelifaecis NRRL 
B-59395]
Length=229

 Score =  101 bits (251),  Expect = 1e-19, Method: Compositional matrix adjust.
 Identities = 72/210 (35%), Positives = 110/210 (53%), Gaps = 7/210 (3%)

Query  20   IAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLMLAAAVA  79
            IA +L+++AA  LW A+R+ W  I    +LGP +  T+ G+ WS  L P+ + M AA VA
Sbjct  23   IASVLILLAALGLWGASRMKWATILVAPDLGPARVFTVNGSDWSPWLTPVGIAMAAAVVA  82

Query  80   ALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGADLAHVPVVTLV-GSARHYW  138
              A+RGW LR +A+L+A          ISL    +       +  VP   ++ G      
Sbjct  83   QFALRGWALRIVAILVALGGVLAVIPAISLLTEGENNLYIVKMVDVPARAVIDGIPTEST  142

Query  139  GAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRARRSIARRQHSNAAGRAAPQ  198
                 + +AVCA+L AV +  +A   G +    ++Y++P ARR    RQ  +   RAA  
Sbjct  143  PGYLVIASAVCAILGAVAMARTARQGGMS----SKYSSPAARRDDLERQIFDERERAAAS  198

Query  199  DDGPDMGPRMSERMIWEALDEGRDPTDREQ  228
              G    P  +ER++W++LDEG DPT+ E+
Sbjct  199  --GEPTAPAANERLLWDSLDEGIDPTEDEE  226


>gi|262202842|ref|YP_003274050.1| hypothetical protein Gbro_2949 [Gordonia bronchialis DSM 43247]
 gi|262086189|gb|ACY22157.1| trp region conserved hypothetical protein [Gordonia bronchialis 
DSM 43247]
Length=245

 Score = 92.4 bits (228),  Expect = 5e-17, Method: Compositional matrix adjust.
 Identities = 78/212 (37%), Positives = 109/212 (52%), Gaps = 26/212 (12%)

Query  32   LWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLMLAAAVAALAVRGWPLRAL  91
             W+A+RL W  + + D L P +E T++GA WS  L PLAL++LAA  AA +VRGW LRAL
Sbjct  34   FWVASRLTWATVFAEDHLSPNREFTVSGADWSPWLTPLALVLLAAIAAAFSVRGWALRAL  93

Query  92   AVLLAAASFAVGYLGISLWVVPDVAARGADLAHVPV-VTLVGSARHYWGAVAAVLAAVCA  150
            A+L+AA      +  ISL      +A  A    +P    ++G   + W A   ++  VC 
Sbjct  94   AILVAAGGVLAAFPAISLVTGGADSAYAAQAGDIPDRFQILGIDTNGWVAAVVLIGTVCC  153

Query  151  LLAAVFLMSSAAIRGSAGEDMARYAAPRARRSIARRQ----HSN-------------AAG  193
            ++A V L+  A   G+A    ++Y  P ARR    R+    H               A G
Sbjct  154  VIAGVALLRIA--NGAAMS--SKYQTPAARREELERKIFADHERRKAAATEAAPPPGAGG  209

Query  194  RAAPQDDGPDMGPRMSERMIWEALDEGRDPTD  225
               P  D P+  P  +ERM+W+ALD G DPTD
Sbjct  210  ETTP--DSPE--PTANERMMWDALDTGIDPTD  237


>gi|296139753|ref|YP_003646996.1| trp region hypothetical protein [Tsukamurella paurometabola DSM 
20162]
 gi|296027887|gb|ADG78657.1| trp region conserved hypothetical protein [Tsukamurella paurometabola 
DSM 20162]
Length=211

 Score = 82.4 bits (202),  Expect = 5e-14, Method: Compositional matrix adjust.
 Identities = 76/211 (37%), Positives = 116/211 (55%), Gaps = 20/211 (9%)

Query  18   IGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLMLAAA  77
            + +A  LL++AAGA+W A+R+ W+ +   D L P ++V + G +W++AL  L L+ LAA 
Sbjct  7    VAVASGLLLLAAGAVWGASRMTWMRVSVNDFLQPGRDVDIAGHTWASALNVLPLVFLAAI  66

Query  78   VAALAVRGWPLRALAVLLAAASFAVGYLGIS-LWVVPDVAARGADLAHVPVVTLVGSARH  136
             AA+AV+GW   A+AV++AAA+    +  +  L   PDVA     L   P   +V + + 
Sbjct  67   AAAIAVKGWARVAVAVVVAAAAIGSAFPALQVLTQEPDVAYIEQILELAPKDIVVQADKL  126

Query  137  YWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDM-ARYAAPRARR-SIARRQHSNAAGR  194
              G   AVL  V A++AA  L+     RG  G  M ++Y +P ARR  + +R   +AA  
Sbjct  127  VAGPATAVLGGVLAVIAATLLL-----RGQRGGGMDSKYTSPAARRAELEKRVFDDAAAE  181

Query  195  AAPQDDGPDMGPRMSERMIWEALDEGRDPTD  225
             +            SER +W+ALD G DPT+
Sbjct  182  ES------------SERDLWDALDSGDDPTE  200


>gi|343926614|ref|ZP_08766113.1| hypothetical protein GOALK_066_00130 [Gordonia alkanivorans NBRC 
16433]
 gi|343763484|dbj|GAA13039.1| hypothetical protein GOALK_066_00130 [Gordonia alkanivorans NBRC 
16433]
Length=261

 Score = 80.1 bits (196),  Expect = 2e-13, Method: Compositional matrix adjust.
 Identities = 72/246 (30%), Positives = 107/246 (44%), Gaps = 30/246 (12%)

Query  9    RPNRRARPMIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLP  68
            +P    RP + IA +L++  A A W A+RL W  + + D L P +   + G+ WS  L P
Sbjct  19   KPKSSRRPQM-IAAVLMLATAAAFWGASRLTWATVSAEDGLSPQRAFDVKGSDWSPWLTP  77

Query  69   LALLMLAAAVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGADLAHVPVV  128
            LAL+ LA   A L+VRGW LR +A+L+AA      +  ISL      +   AD   +P  
Sbjct  78   LALVYLAGIAAVLSVRGWGLRLVALLVAAGGVLAAFPAISLIAGGADSEYAADAGDIPDR  137

Query  129  TLVGSARHYWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRARRSIARRQ-  187
             +V      W   A VL      +AA  ++   A   +     ++Y  P ARR     + 
Sbjct  138  YIVLYTDTQWLPAALVLLGTVCAVAAAVVLLRVAKGATMS---SKYKTPAARREELETEI  194

Query  188  -------------------------HSNAAGRAAPQDDGPDMGPRMSERMIWEALDEGRD  222
                                      ++A      +D  P      +ERM+W+ALD G D
Sbjct  195  FADYERRKRAAAADSAKAGDTPADADADADAGTGGKDRRPGDDRDANERMMWDALDTGID  254

Query  223  PTDREQ  228
            PTD ++
Sbjct  255  PTDPDE  260


>gi|260578035|ref|ZP_05845958.1| membrane protein [Corynebacterium jeikeium ATCC 43734]
 gi|258603862|gb|EEW17116.1| membrane protein [Corynebacterium jeikeium ATCC 43734]
Length=229

 Score = 71.2 bits (173),  Expect = 1e-10, Method: Compositional matrix adjust.
 Identities = 68/241 (29%), Positives = 107/241 (45%), Gaps = 35/241 (14%)

Query  11   NRRARPMIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLA  70
             ++A+ +  IA L +V++A  LW A+RL +V +   D+        L G+ W  AL+PLA
Sbjct  8    TQKAKRIRQIALLCVVLSAAGLWGASRLKFVTVAVDDDKAGASTKELVGSVWDPALVPLA  67

Query  71   LLMLAAAVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGADLAHVPVVT-  129
            L M+AA + ++AV+    R L V++ A +    +  + L       AR   L      T 
Sbjct  68   LAMVAALILSMAVQPMVRRVLGVVIGALAATASFRAVQLLSSDVDLARAQSLLRSGAATQ  127

Query  130  -------------LVGSARHYWGAVAAVLAAVCALLAAVFLMSSAAIR-GSAGEDMARYA  175
                         +V    H  G V  +LAA   ++    L+    +R G   +  +RY 
Sbjct  128  KESDPVQISEWARVVSGEVHSLGIVLVLLAAAIGVVGGAILI----LRPGQQSKGHSRYE  183

Query  176  APRARRSIARRQHSNAAGRAAPQDDGPDMGPRMSERMIWEALDEGRDPTDREQESDT-EG  234
             P  RR+ A    +          + PD     S R++W+ALD G DPT+    S T +G
Sbjct  184  TPEVRRADAEEDLA----------ENPD-----STRVLWDALDAGVDPTEESDFSRTKQG  228

Query  235  R  235
            R
Sbjct  229  R  229


>gi|68535871|ref|YP_250576.1| hypothetical protein jk0796 [Corynebacterium jeikeium K411]
 gi|68263470|emb|CAI36958.1| putative membrane protein [Corynebacterium jeikeium K411]
Length=244

 Score = 69.7 bits (169),  Expect = 3e-10, Method: Compositional matrix adjust.
 Identities = 72/256 (29%), Positives = 113/256 (45%), Gaps = 41/256 (16%)

Query  2    AANAGSVRPN------RRARPMIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEV  55
            AANA S   +      ++A+ +  IA L +V++A  LW A+RL +V +   D+       
Sbjct  8    AANAVSAEEDVTADATQKAKRIRQIALLCVVLSAVGLWGASRLKFVTVAVDDDKAGASTK  67

Query  56   TLTGASWSTALLPLALLMLAAAVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDV  115
             L G+ W  AL+PLAL M+AA + ++AV+    R L V++ A +    +  + L      
Sbjct  68   ELVGSVWDPALVPLALAMVAALILSMAVQPMVRRVLGVVIVALAATASFRAVQLLSSDVD  127

Query  116  AARGADLAHVPVVT--------------LVGSARHYWGAVAAVLAAVCALLAAVFLMSSA  161
             AR   L      T              ++    H  G V  +LAA   ++    L+   
Sbjct  128  LARAQSLLRSGAATQKESDPVQISEWARVISGDVHSLGIVLVLLAAAIGVVGGAILI---  184

Query  162  AIR-GSAGEDMARYAAPRARRSIARRQHSNAAGRAAPQDDGPDMGPRMSERMIWEALDEG  220
             +R G   +  +RY  P  RR+ A    +          + PD     S R++W+ALD G
Sbjct  185  -LRPGQESKGHSRYETPEVRRADAEEDLA----------ENPD-----STRVLWDALDAG  228

Query  221  RDPTDREQESDT-EGR  235
             DPT+    S T +GR
Sbjct  229  VDPTEESDFSRTKQGR  244


>gi|226360155|ref|YP_002777933.1| hypothetical protein ROP_07410 [Rhodococcus opacus B4]
 gi|226238640|dbj|BAH48988.1| hypothetical membrane protein [Rhodococcus opacus B4]
Length=234

 Score = 68.6 bits (166),  Expect = 7e-10, Method: Compositional matrix adjust.
 Identities = 67/200 (34%), Positives = 100/200 (50%), Gaps = 16/200 (8%)

Query  32   LWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLMLAAAVAALAVRGWPLRAL  91
            LW A+R+ WV + S D LG  +   L G +W+ AL PLAL ++AA  A+ AV+GW LR L
Sbjct  33   LWGASRMTWVEVTSSDGLGEERTSVLVGGTWAAALTPLALTLVAAIAASFAVKGWALRVL  92

Query  92   AVLLAAASFAVGYLGISLWVVPDVAARGADLAHVPVVTLVGSARHYWGAVAAVLAAVCAL  151
             VL+A  + A     + L V        A LA +P    V S   +  A A ++      
Sbjct  93   GVLVAVVAVAAAVPAVGLLVSGASDDEAARLAELPGRAEVQSVSVH-AAPAVLVLVGALA  151

Query  152  LAAVFLMSSAAIRGSAGEDMARYAAPRARRSIARRQHSNAAGRAAPQDDGPDMGPRMSER  211
              A  +      R  AG   ++Y +P ARR  A++  +++AG              +++R
Sbjct  152  ALAAAVELVRRPRVRAGL-SSKYDSPGARRDAAKKTGADSAGEP------------VTQR  198

Query  212  MIWEALDEGRDPT--DREQE  229
            M+W+ALD G DPT  D++ E
Sbjct  199  MLWDALDAGEDPTVDDKKAE  218


>gi|333919125|ref|YP_004492706.1| membrane protein [Amycolicicoccus subflavus DQS3-9A1]
 gi|333481346|gb|AEF39906.1| Membrane protein [Amycolicicoccus subflavus DQS3-9A1]
Length=236

 Score = 62.8 bits (151),  Expect = 4e-08, Method: Compositional matrix adjust.
 Identities = 65/222 (30%), Positives = 103/222 (47%), Gaps = 5/222 (2%)

Query  4    NAGSVRPNRRARPMIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASWS  63
             A +V    R +    +A +L++  A  +W ++R  W+ +   D L P +   + GA+W+
Sbjct  2    TAAAVEQQGRTKRRRALAMVLVLAGASLVWASSRAGWIAMSVADGLQPARLEAVIGATWA  61

Query  64   TALLPLALLMLAAAVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGADLA  123
              L P+AL M AA +A L VRG   R + +++A  + A     I + V      R   L 
Sbjct  62   AELGPIALAMGAAVIAMLVVRGRFHRLVGIVIAVLAGAAAVSPIRVLVAGVDEDRVRQLE  121

Query  124  HVPVVTLVGS-ARHYWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRARRS  182
             +PV   +   +   W    A+L A   L  A   + + +  G+A    +RY  P ARR 
Sbjct  122  SLPVRAEIADLSLTIWAPSLALLGAAAGLAGAALAIVAPSPEGAA---RSRYQTPAARRD  178

Query  183  IARRQHSNAAGRAAPQDDGPDMGPRMSERMIWEALDEGRDPT  224
             AR    +   R      G   G  ++ER++W+ALD G DPT
Sbjct  179  DARAVMRDEE-RDGAISGGTAAGIPLNERLLWDALDAGEDPT  219


>gi|172040846|ref|YP_001800560.1| hypothetical protein cur_1166 [Corynebacterium urealyticum DSM 
7109]
 gi|171852150|emb|CAQ05126.1| putative membrane protein [Corynebacterium urealyticum DSM 7109]
Length=216

 Score = 62.0 bits (149),  Expect = 8e-08, Method: Compositional matrix adjust.
 Identities = 69/233 (30%), Positives = 102/233 (44%), Gaps = 29/233 (12%)

Query  8    VRPNRRARPMIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALL  67
             +  +R R   G+AQLL+++AA  +W   R+ W+    FD+        L GA W  A  
Sbjct  2    TKTEKRIR---GLAQLLVILAAAGVWGFGRMNWLTAEVFDDKSGESTHQLVGAVWDPAGT  58

Query  68   PLALLMLAAAVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGADLAHVPV  127
            PLAL M+AA +A +AV     R + VL+A  S    +  + L        R   L    V
Sbjct  59   PLALAMMAALIATMAVPPVVRRIIGVLIALLSAGASFRAVQLVGAEPDLYRAQQLLRSGV  118

Query  128  VTLVGSARHYWGAVAAVLAA-----------VCALLAAVFLMSSAAIRGSAGEDMARYAA  176
             T   S      A A VL+A           + A+L     +  A   G++    +RY  
Sbjct  119  ATQNSSNPEQISAWAQVLSAEVHNLPVLLTVIVAILGVCGGVILAMKPGASDSGYSRYET  178

Query  177  PRARRSIARRQHSNAAGRAAPQDDGPDMGPRMSERMIWEALDEGRDPTDREQE  229
            P  RR  A++  +          + PD G     R++W+ALD G DPTD E++
Sbjct  179  PERRREGAKQDLT----------ENPDSG-----RVLWDALDAGVDPTDDERK  216


>gi|340794176|ref|YP_004759639.1| hypothetical protein CVAR_1210 [Corynebacterium variabile DSM 
44702]
 gi|340534086|gb|AEK36566.1| putative membrane protein [Corynebacterium variabile DSM 44702]
Length=228

 Score = 60.8 bits (146),  Expect = 1e-07, Method: Compositional matrix adjust.
 Identities = 65/227 (29%), Positives = 94/227 (42%), Gaps = 33/227 (14%)

Query  19   GIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLMLAAAV  78
             +A +L +++A  LW   ++ W+     D+        + G  W  A  PLAL MLAA +
Sbjct  17   NLALVLTLLSAAGLWGTGQMTWLTASVVDDKTGESTEQIIGRVWDAAGTPLALAMLAAMI  76

Query  79   AALAVRGWPLRALAVL-----LAAASFAVGYLG--------ISLWVVPDVAARGADLAHV  125
             + A+     R L  +       A   AV  LG          L        +  D   +
Sbjct  77   LSFALAPMARRVLGGISAALAAIAGFAAVMLLGGDPDLDRAQQLLTTGAATQKSTDPVQI  136

Query  126  PV-VTLVGSARHYWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRARRSIA  184
                T+V ++ H +  V A+LAA C ++  V L   A   G A +  +RY  P ARR   
Sbjct  137  SDWATVVDASVHTFPVVLALLAAACGVVGGVLL---AMKPGEARQGHSRYETPEARREGV  193

Query  185  RRQHSNAAGRAAPQDDGPDMGPRMSERMIWEALDEGRDPTDREQESD  231
                +   G               S R++W+ALD G DPTDRE ESD
Sbjct  194  LEDLNEEPG---------------SGRVLWDALDAGVDPTDRE-ESD  224


>gi|336325393|ref|YP_004605359.1| hypothetical protein CRES_0839 [Corynebacterium resistens DSM 
45100]
 gi|336101375|gb|AEI09195.1| putative membrane protein [Corynebacterium resistens DSM 45100]
Length=220

 Score = 59.3 bits (142),  Expect = 4e-07, Method: Compositional matrix adjust.
 Identities = 65/227 (29%), Positives = 99/227 (44%), Gaps = 44/227 (19%)

Query  21   AQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLMLAAAVAA  80
            A LL++++A  LW+A RL +V     D+       TL G+ W  A++PLAL M+AA +  
Sbjct  7    ALLLVILSAMGLWIAGRLKFVTANVSDDKAGDSVKTLVGSVWDPAMVPLALAMIAAVILT  66

Query  81   LAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGADLAHVPVVTLVGSAR-----  135
            LAV+    R L  ++A  +    +  + L +  DV     DLA    +   GSA      
Sbjct  67   LAVQPVVRRILGAVVALLAAVASFRSVML-LTSDV-----DLARAKSILTSGSATQRATK  120

Query  136  ---------------HYWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRAR  180
                           H    + A++AA   ++  V LM      G A +  +RY  P  R
Sbjct  121  PVQISDWAQVTDAHVHTMPVLLALVAAALGVIGGVLLMMQP---GEASKGHSRYETPENR  177

Query  181  RSIARRQHSNAAGRAAPQDDGPDMGPRMSERMIWEALDEGRDPTDRE  227
            RS A+   +          + PD     + R +W+ +D G DPTD E
Sbjct  178  RSGAQEDLA----------ENPD-----NPRALWDVMDTGVDPTDDE  209


>gi|25028548|ref|NP_738602.1| hypothetical protein CE1992 [Corynebacterium efficiens YS-314]
 gi|259507604|ref|ZP_05750504.1| membrane protein [Corynebacterium efficiens YS-314]
 gi|23493833|dbj|BAC18802.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
 gi|259164783|gb|EEW49337.1| membrane protein [Corynebacterium efficiens YS-314]
Length=221

 Score = 58.9 bits (141),  Expect = 6e-07, Method: Compositional matrix adjust.
 Identities = 67/222 (31%), Positives = 104/222 (47%), Gaps = 41/222 (18%)

Query  25   LVVAAGAL--WMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLMLAAAVAALA  82
            L++ AGAL  W+++R+ W+ + +FD+       +L GA+WST ++ LAL + AA VA L 
Sbjct  9    LLIGAGALVVWISSRMTWITVEAFDDKSGATTQSLVGATWSTEIMALALALAAACVAGLV  68

Query  83   VRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGADLAHVPVVTLVGSAR-------  135
            +R    R +  L A  +       +SL +  +  A  A+ A   + + V S R       
Sbjct  69   LRRTGRRIVGGLAAVLAVGASLSPLSL-LTGEATAEDAERARSLLTSGVASQRASEGTLL  127

Query  136  -----------HYWGAVAAVLAAVCALLAAVFLMSSAAIR-GSAGEDMARYAAPRARRSI  183
                       H   AV A+L    AL   V L    A+R G+ G   +R+   +AR   
Sbjct  128  SEWAEITDLSTHPAAAVVALLGCALALFGGVLL----AMRPGADGVQASRFERRQAR---  180

Query  184  ARRQHSNAAGRAAPQDDGPDMGPRMSERMIWEALDEGRDPTD  225
            A + H++        +  PD G     R++W+ALDE  DPTD
Sbjct  181  ADKIHTDL-------EQAPDSG-----RVMWDALDEDIDPTD  210


>gi|255325291|ref|ZP_05366397.1| trp region conserved hypothetical membrane protein [Corynebacterium 
tuberculostearicum SK141]
 gi|255297856|gb|EET77167.1| trp region conserved hypothetical membrane protein [Corynebacterium 
tuberculostearicum SK141]
Length=212

 Score = 58.2 bits (139),  Expect = 9e-07, Method: Compositional matrix adjust.
 Identities = 58/221 (27%), Positives = 98/221 (45%), Gaps = 31/221 (14%)

Query  23   LLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLMLAAAVAALA  82
            LL+ V A  LW+++R  WVV  S D+        + G++WS  +  L L+++A AVA +A
Sbjct  9    LLIAVGAIVLWLSSRATWVVAASEDDKAGSAANDIIGSAWSLEIKALTLVLVAGAVAGMA  68

Query  83   VRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAAR-------------GADLAHVPV-V  128
            +R    R + ++ A A+ A  +  +SL        R               D A +    
Sbjct  69   LRRVGRRVVGIVCALAAAASAWTPVSLLTAGADTERAQKILQGASANENAVDSAQISDWA  128

Query  129  TLVGSARHYWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRARRSIARRQH  188
            T+V +  H  G + A++ A  AL  AV L  +                P A ++    ++
Sbjct  129  TVVSTEVHSLGPIVALIGAAAALFGAVMLARN----------------PGADKAKVSSKY  172

Query  189  SNAAGRAAPQDDGPDMGPRMSERMIWEALDEGRDPTDREQE  229
               A R A  ++  +     S R++W+ALD   DPTD +++
Sbjct  173  ETPAARQAKLEEDLETSSD-SGRVMWDALDSDIDPTDMDKK  212


>gi|111018028|ref|YP_701000.1| hypothetical protein RHA1_ro01015 [Rhodococcus jostii RHA1]
 gi|110817558|gb|ABG92842.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=215

 Score = 57.4 bits (137),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 67/199 (34%), Positives = 100/199 (51%), Gaps = 14/199 (7%)

Query  33   WMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLMLAAAVAALAVRGWPLRALA  92
            W A+R+ WV + S D LG  +   L G +W+ AL PLAL ++AA  A  AV+GW LR L 
Sbjct  15   WGASRMTWVEVTSSDGLGEERTSALAGGTWAAALTPLALTLVAAIAALFAVKGWALRVLG  74

Query  93   VLLAAASFAVGYLGISLWVVPDVAARGADLAHVPVVTLVGSARHYWGAVAAVLAAVCALL  152
            VL+A  + A     + L V          LA +P    V S   + G     L    A L
Sbjct  75   VLVAVVAVAAAVPAVGLIVSGASDDEAGRLAELPGRAEVQSVSVHVGPAVLALVGGVAAL  134

Query  153  AAVFLMSSAAIRGSAGEDMARYAAPRARRSIARRQHSNAAGRAAPQDDGPDMGPRMSERM  212
            AA   +     R  AG   ++Y +P ARR  A++  ++A        +GP     +++RM
Sbjct  135  AAAVELVRRP-RVRAGLS-SKYDSPGARRDAAKKAGADAG-------EGP-----VTQRM  180

Query  213  IWEALDEGRDPTDREQESD  231
            +W+ALD G DPT  +++++
Sbjct  181  LWDALDAGEDPTVEDKKAE  199


>gi|300858772|ref|YP_003783755.1| hypothetical protein cpfrc_01355 [Corynebacterium pseudotuberculosis 
FRC41]
 gi|300686226|gb|ADK29148.1| putative membrane protein [Corynebacterium pseudotuberculosis 
FRC41]
 gi|302206477|gb|ADL10819.1| Hypothetical protein CpC231_1348 [Corynebacterium pseudotuberculosis 
C231]
 gi|302331032|gb|ADL21226.1| Hypothetical protein Cp1002_1349 [Corynebacterium pseudotuberculosis 
1002]
 gi|308276719|gb|ADO26618.1| Putative transmembrane protein [Corynebacterium pseudotuberculosis 
I19]
 gi|341825160|gb|AEK92681.1| Hypothetical protein CpPAT10_1348 [Corynebacterium pseudotuberculosis 
PAT10]
Length=213

 Score = 56.2 bits (134),  Expect = 4e-06, Method: Compositional matrix adjust.
 Identities = 56/218 (26%), Positives = 98/218 (45%), Gaps = 22/218 (10%)

Query  15   RPMIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLML  74
            +PM   A  L+ + A A+W A+R+ W+ + ++D+    K + + GA WST    +AL++L
Sbjct  4    KPMQSSA--LIGIGALAVWGASRMAWLGVEAYDDKSGSKSLNINGAMWSTEATAVALVLL  61

Query  75   AAAVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVV-PD-------VAARGADLAHVP  126
            AA VA+ A+R    R + ++   A+    +  I L    PD       + +  A      
Sbjct  62   AACVASFALRRSGRRLVGIISGLAAAGGAWSPIQLMTTDPDRERVLKLLTSESASGHQKD  121

Query  127  VVTLVGSARHYWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRARRSIARR  186
               L G +        A  AA+  +  A+ L     +  + G+D AR      ++  +++
Sbjct  122  GAALTGWSEIMQVTTHAPAAALAIIGCAIALFGGLVLAMNPGKDSARKNRYERKQERSQK  181

Query  187  QHSNAAGRAAPQDDGPDMGPRMSERMIWEALDEGRDPT  224
             H +         D PD G     R++W+A+D   DPT
Sbjct  182  IHKDL-------KDAPDSG-----RVLWDAIDADIDPT  207


>gi|262184430|ref|ZP_06043851.1| hypothetical protein CaurA7_10593 [Corynebacterium aurimucosum 
ATCC 700975]
Length=219

 Score = 56.2 bits (134),  Expect = 4e-06, Method: Compositional matrix adjust.
 Identities = 62/219 (29%), Positives = 95/219 (44%), Gaps = 31/219 (14%)

Query  20   IAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLMLAAAVA  79
            I  +L+   A  LW+++R+ WV     D+        L+G+ WS  L+ L++++LA  VA
Sbjct  15   IGPVLMFAGAILLWLSSRMTWVTAAVEDDKAGSSVAELSGSLWSLELIALSVVVLAGGVA  74

Query  80   ALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGADLAHVPV------------  127
            A A+R    R ++VL A A+ A G+  ++L      A R  +L                 
Sbjct  75   AFALRRAGRRIVSVLTALAAAAAGWRPVALLTAGAEAERAQELLQGGTNDTSVDSATISD  134

Query  128  -VTLVGSARHYWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRARRSIARR  186
              T++ +     G V A++ A  AL  AV + S+    G      A+Y  P      A R
Sbjct  135  WATVLTADASTAGPVLAIVGAALALFGAVMVASNP---GGDKPRSAKYETP------AVR  185

Query  187  QHSNAAGRAAPQDDGPDMGPRMSERMIWEALDEGRDPTD  225
            Q          QD G         R++W+ALD   DPTD
Sbjct  186  QERLQEDLETSQDSG---------RVMWDALDADIDPTD  215


>gi|54023827|ref|YP_118069.1| hypothetical protein nfa18590 [Nocardia farcinica IFM 10152]
 gi|54015335|dbj|BAD56705.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=240

 Score = 55.8 bits (133),  Expect = 5e-06, Method: Compositional matrix adjust.
 Identities = 73/206 (36%), Positives = 101/206 (50%), Gaps = 24/206 (11%)

Query  32   LWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLMLAAAVAALAVRGWPLRAL  91
            +W A+RL WV + S D L  P+   L GA+W  AL PLAL++LAA  A LA RGW  R +
Sbjct  40   MWGASRLTWVRVTSADGLTEPRTDDLVGATWFGALTPLALVLLAAVAAVLATRGWLRRVV  99

Query  92   AVLLAAASFAVGYLGISLWVVPD-VAARGADLAHVP---VVTLVGSARHYWGAVAAVLAA  147
             VL+A  +        +L       A R   LA +P    VT V ++   + AV  + AA
Sbjct  100  GVLVALVAAVTAVPAFALLTGSGATAERAGALAELPGRATVTEVQTS--IFPAVVTMTAA  157

Query  148  VCALLAAVFLMSSAAIRGSAGEDMARYAAP---RARRSIARRQHSNAAGRAAPQDDGPDM  204
            +CA  A + L  +   R SAG    RY  P   RA  +    +  N  G A         
Sbjct  158  LCAFAAGLLL--ARMPRESAGLS-GRYDNPGARRAAAAEEVAKQRNQEGGA---------  205

Query  205  GPRMSERMIWEALDEGRDPTDREQES  230
               +SER++W+ALD G DPT+ +  +
Sbjct  206  ---LSERVLWDALDAGEDPTEDDHRT  228


>gi|19553289|ref|NP_601291.1| hypothetical protein NCgl2011 [Corynebacterium glutamicum ATCC 
13032]
 gi|62390927|ref|YP_226329.1| hypothetical protein cg2294 [Corynebacterium glutamicum ATCC 
13032]
 gi|21324862|dbj|BAB99485.1| Hypothetical membrane protein [Corynebacterium glutamicum ATCC 
13032]
 gi|41326266|emb|CAF20428.1| putative membrane protein [Corynebacterium glutamicum ATCC 13032]
Length=219

 Score = 55.5 bits (132),  Expect = 6e-06, Method: Compositional matrix adjust.
 Identities = 63/224 (29%), Positives = 103/224 (46%), Gaps = 38/224 (16%)

Query  25   LVVAAGAL--WMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLM---------  73
            L + AGAL  W+++R+ WV I +FD+       ++ GA+WST ++ LAL +         
Sbjct  9    LGIGAGALVVWISSRMNWVTIEAFDDKSGSVTQSIVGATWSTEIMALALALLAAFAAALV  68

Query  74   -------LAAAVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGADLAHVP  126
                   +   ++AL   G  L  LA+L            ++  V    A  G  L+   
Sbjct  69   LKRMGRRIIGGISALIAVGASLSPLALLTQDPDAERARTLLTSGVASQKANSGTLLSD--  126

Query  127  VVTLVGSARHYWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRARRSIARR  186
               ++ +  H   AV A++    AL+  V L    A+R   GED A+      +++ A +
Sbjct  127  WAEIINTTTHPLAAVVAMIGCALALVGGVVL----AMR--PGEDTAKSNQYERKQARAEK  180

Query  187  QHSNAAGRAAPQDDGPDMGPRMSERMIWEALDEGRDPTDREQES  230
             H++ A     QD  PD G     R++W+ALDE  D T++ Q+S
Sbjct  181  IHTDLA-----QD--PDSG-----RVMWDALDEDIDFTEKTQKS  212


>gi|227503331|ref|ZP_03933380.1| conserved hypothetical protein [Corynebacterium accolens ATCC 
49725]
 gi|227075834|gb|EEI13797.1| conserved hypothetical protein [Corynebacterium accolens ATCC 
49725]
Length=211

 Score = 54.7 bits (130),  Expect = 1e-05, Method: Compositional matrix adjust.
 Identities = 62/217 (29%), Positives = 91/217 (42%), Gaps = 31/217 (14%)

Query  23   LLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLMLAAAVAALA  82
            LL+ V    LW ++R  WV   S D+        + G+SWS  L+ L L++LA  +A LA
Sbjct  8    LLIAVGTAVLWFSSRSTWVKAVSEDDKSGSATNEIVGSSWSLELMALTLVLLAGVLAGLA  67

Query  83   VRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAAR------GADLAHVPV--------V  128
            +R    R +A++ A A+ A  +  I+L      A R      GA      V         
Sbjct  68   LRRTGRRIVAIVCALAAAAAAWSPINLLTSGADAQRAQKILQGASANENAVDSAAISEWA  127

Query  129  TLVGSARHYWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRARRSIARRQH  188
            T++       G + A++ A  A   AV L        + G+D A+  A     + A RQ 
Sbjct  128  TVISVEVTKLGPIVAIIGAALAFFGAVLLAQ------NPGKDKAK--ASSKYETPAARQE  179

Query  189  SNAAGRAAPQDDGPDMGPRMSERMIWEALDEGRDPTD  225
              A       D G         R++W+ALD   DPTD
Sbjct  180  KLAEDLETSSDSG---------RVMWDALDSDIDPTD  207


>gi|227833439|ref|YP_002835146.1| hypothetical protein cauri_1615 [Corynebacterium aurimucosum 
ATCC 700975]
 gi|227454455|gb|ACP33208.1| putative membrane protein [Corynebacterium aurimucosum ATCC 700975]
Length=202

 Score = 54.7 bits (130),  Expect = 1e-05, Method: Compositional matrix adjust.
 Identities = 61/216 (29%), Positives = 94/216 (44%), Gaps = 31/216 (14%)

Query  23   LLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLMLAAAVAALA  82
            +L+   A  LW+++R+ WV     D+        L+G+ WS  L+ L++++LA  VAA A
Sbjct  1    MLMFAGAILLWLSSRMTWVTAAVEDDKAGSSVAELSGSLWSLELIALSVVVLAGGVAAFA  60

Query  83   VRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGADLAHVPV-------------VT  129
            +R    R ++VL A A+ A G+  ++L      A R  +L                   T
Sbjct  61   LRRAGRRIVSVLTALAAAAAGWRPVALLTAGAEAERAQELLQGGTNDTSVDSATISDWAT  120

Query  130  LVGSARHYWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRARRSIARRQHS  189
            ++ +     G V A++ A  AL  AV + S+    G      A+Y  P      A RQ  
Sbjct  121  VLTADASTAGPVLAIVGAALALFGAVMVASNP---GGDKPRSAKYETP------AVRQER  171

Query  190  NAAGRAAPQDDGPDMGPRMSERMIWEALDEGRDPTD  225
                    QD G         R++W+ALD   DPTD
Sbjct  172  LQEDLETSQDSG---------RVMWDALDADIDPTD  198


>gi|227504742|ref|ZP_03934791.1| conserved hypothetical protein [Corynebacterium striatum ATCC 
6940]
 gi|227198592|gb|EEI78640.1| conserved hypothetical protein [Corynebacterium striatum ATCC 
6940]
Length=210

 Score = 54.7 bits (130),  Expect = 1e-05, Method: Compositional matrix adjust.
 Identities = 61/224 (28%), Positives = 98/224 (44%), Gaps = 32/224 (14%)

Query  20   IAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLMLAAAVA  79
            I  LL+ V A  LW+++R+ W +    D+      V + G+ WS  L+ L L++L  AVA
Sbjct  5    IGPLLIAVGAILLWLSSRMTWAIASVEDDKSGFSIVDMIGSFWSLELIALTLVLLVGAVA  64

Query  80   ALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGADL-------------AHVP  126
              A+R    R +A + A A+ AV +  +SL      AAR  +L             AH+ 
Sbjct  65   GAALRRTARRVVAAVCAVAAAAVAWNPVSLLTYGADAARAQELLRAGSSDENAVNGAHIS  124

Query  127  V-VTLVGSARHYWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRARRSIAR  185
                ++G+     G V A++ A  AL  AV L+    +         +Y  P AR+ +  
Sbjct  125  DWAIVIGTEVSKVGPVIAIIGAAVALFGAVLLVRKPGVDKPRS---TKYETPAARQEMIA  181

Query  186  RQHSNAAGRAAPQDDGPDMGPRMSERMIWEALDEGRDPTDREQE  229
             +                     S R++W+ALD   DPTD +++
Sbjct  182  EELETTTD---------------SGRVMWDALDNDIDPTDVKRD  210


>gi|344044762|gb|EGV40437.1| hypothetical protein CgS9114_07636 [Corynebacterium glutamicum 
S9114]
Length=219

 Score = 54.3 bits (129),  Expect = 1e-05, Method: Compositional matrix adjust.
 Identities = 65/227 (29%), Positives = 104/227 (46%), Gaps = 44/227 (19%)

Query  25   LVVAAGAL--WMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLM---------  73
            L + AGAL  W+++R+ WV I +FD+       ++ GA+WST ++ LAL +         
Sbjct  9    LGIGAGALVVWISSRMNWVTIEAFDDKSGSVTQSIVGATWSTEIMALALALLAAFAAALV  68

Query  74   -------LAAAVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARG---ADLA  123
                   +   ++AL   G  L  LA+L            ++  V    A  G   +D A
Sbjct  69   LKRMGRRIIGGISALIAVGASLSPLALLTQDPDAERARTLLTSGVASQKANSGTLLSDWA  128

Query  124  HVPVVTLVGSARHYWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRARRSI  183
             +  +T      H   AV A++    AL+  V L    A+R   GED A+      +++ 
Sbjct  129  EIINITT-----HPLAAVVAMIGCALALVGGVVL----AMR--PGEDTAKSNQYERKQAR  177

Query  184  ARRQHSNAAGRAAPQDDGPDMGPRMSERMIWEALDEGRDPTDREQES  230
            A + H++ A     QD  PD G     R++W+ALDE  D T++ Q+S
Sbjct  178  AEKIHTDLA-----QD--PDSG-----RVMWDALDEDIDFTEKTQKS  212


>gi|38234131|ref|NP_939898.1| hypothetical protein DIP1556 [Corynebacterium diphtheriae NCTC 
13129]
 gi|38200393|emb|CAE50081.1| Putative membrane protein [Corynebacterium diphtheriae]
Length=191

 Score = 53.9 bits (128),  Expect = 2e-05, Method: Compositional matrix adjust.
 Identities = 54/203 (27%), Positives = 97/203 (48%), Gaps = 20/203 (9%)

Query  32   LWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLMLAAAVAALAVRGWPLRAL  91
            +W ++R+PW+ + +FD+    K+V + GA+WST    +AL+++AA  A L +R    R +
Sbjct  1    MWGSSRMPWLHVEAFDDKSGAKQVDMLGATWSTETTAVALVLIAACAAILVLRRAGRRFV  60

Query  92   AVLLAAASFAVGYLGISLWVVPDVAARGADLAHVPVVT---LVGSARHYWGAVAAVL---  145
            AV+ A A+    +  + L      A R  ++      T     G+A   W  +  +    
Sbjct  61   AVVSAVAAAGGLWAPVQLLFNEPDATRALNILTSHAATGHAKDGAALTGWAEITHISVQA  120

Query  146  -AAVCALLAAVFLMSSAAIRG-SAGEDMARYAAPRARRSIARRQHSNAAGRAAPQDDGPD  203
             + + A+  A F + +A I   + G+D         ++S   RQ +      +  ++ PD
Sbjct  121  PSVILAMCGAGFALIAAIIATMNPGQD-------SVQKSRFERQQARNEKIESELEEAPD  173

Query  204  MGPRMSERMIWEALDEGRDPTDR  226
             G     R++W+A+D   DPTDR
Sbjct  174  SG-----RVLWDAIDADIDPTDR  191


>gi|334697190|gb|AEG81987.1| putative membrane protein [Corynebacterium ulcerans 809]
Length=213

 Score = 53.9 bits (128),  Expect = 2e-05, Method: Compositional matrix adjust.
 Identities = 58/224 (26%), Positives = 95/224 (43%), Gaps = 34/224 (15%)

Query  15   RPMIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLML  74
            +PM   A  L+ + A A+W A+R+PW+ + ++D+    K + ++G  WST    +AL++L
Sbjct  4    KPMQSSA--LIGLGALAVWGASRMPWLGVEAYDDKSGSKSLDVSGGMWSTETTAVALVLL  61

Query  75   AAAVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVV-PD-------VAARGADLAHVP  126
            AA +A+ A+R    R + ++   A+    +  I L    PD       + +  A      
Sbjct  62   AACIASFALRRAGRRLVGIVAGLAAAGGAWSPIHLLTTDPDRERVLSLLTSESASGHQKD  121

Query  127  VVTLVGSAR------HYWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRAR  180
               L G A       H   A  A++    AL   + L   A   G       RY   + R
Sbjct  122  GAALTGWAEITNLTTHTSAAALAIIGCALALFGGLVL---AMNPGKDSAKKNRYERKQER  178

Query  181  RSIARRQHSNAAGRAAPQDDGPDMGPRMSERMIWEALDEGRDPT  224
                R+            +D PD G     R++W+A+D   DPT
Sbjct  179  SQKIRKD----------LEDAPDSG-----RVLWDAIDADIDPT  207


>gi|337291078|ref|YP_004630099.1| hypothetical protein CULC22_01470 [Corynebacterium ulcerans BR-AD22]
 gi|334699384|gb|AEG84180.1| putative membrane protein [Corynebacterium ulcerans BR-AD22]
Length=213

 Score = 53.5 bits (127),  Expect = 2e-05, Method: Compositional matrix adjust.
 Identities = 58/224 (26%), Positives = 95/224 (43%), Gaps = 34/224 (15%)

Query  15   RPMIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLML  74
            +PM   A  L+ + A A+W A+R+PW+ + ++D+    K + ++G  WST    +AL++L
Sbjct  4    KPMQSSA--LIGLGALAVWGASRMPWLGVEAYDDKSGSKSLDVSGGMWSTETTAVALVLL  61

Query  75   AAAVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVV-PD-------VAARGADLAHVP  126
            AA +A+ A+R    R + ++   A+    +  I L    PD       + +  A      
Sbjct  62   AACIASFALRRVGRRLVGIVAGLAAAGGAWSPIHLLTTDPDRERVLSLLTSESASGHQKD  121

Query  127  VVTLVGSAR------HYWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRAR  180
               L G A       H   A  A++    AL   + L   A   G       RY   + R
Sbjct  122  GAALTGWAEITNLTTHTSAAALAIIGCALALFGGLVL---AMNPGKDSAKKNRYERKQER  178

Query  181  RSIARRQHSNAAGRAAPQDDGPDMGPRMSERMIWEALDEGRDPT  224
                R+            +D PD G     R++W+A+D   DPT
Sbjct  179  SQKIRKD----------LEDAPDSG-----RVLWDAIDADIDPT  207


>gi|306836430|ref|ZP_07469406.1| conserved hypothetical protein [Corynebacterium accolens ATCC 
49726]
 gi|304567681|gb|EFM43270.1| conserved hypothetical protein [Corynebacterium accolens ATCC 
49726]
Length=211

 Score = 53.5 bits (127),  Expect = 3e-05, Method: Compositional matrix adjust.
 Identities = 60/217 (28%), Positives = 90/217 (42%), Gaps = 31/217 (14%)

Query  23   LLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLMLAAAVAALA  82
            LL+ V    LW ++R  WV   S D+        + G++WS  L+ L L++LA  +A +A
Sbjct  8    LLIAVGTAVLWFSSRSTWVKAVSEDDKSGSATNEIVGSAWSLELMALTLVLLAGVLAGIA  67

Query  83   VRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAAR------GADLAHVPV--------V  128
            +R    R +A++ A A+    +  ISL      A R      GA      V         
Sbjct  68   LRRTGRRIVAIVCALAAAGAAWSPISLLTSGADAQRAQKILQGASANENAVDSAAISEWA  127

Query  129  TLVGSARHYWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRARRSIARRQH  188
            T++       G + A++ A  A   AV L        + G+D A+  A     + A RQ 
Sbjct  128  TVISVEVTKLGPIVAIIGAALAFFGAVLLAQ------NPGKDKAK--ASSKYETPAARQE  179

Query  189  SNAAGRAAPQDDGPDMGPRMSERMIWEALDEGRDPTD  225
              A       D G         R++W+ALD   DPTD
Sbjct  180  KLAEDLETSSDSG---------RVMWDALDSDIDPTD  207



Lambda     K      H
   0.321    0.132    0.400 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 316387145800


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40