BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1610
Length=235
Score E
Sequences producing significant alignments: (Bits) Value
gi|15608748|ref|NP_216126.1| hypothetical protein Rv1610 [Mycoba... 448 3e-124
gi|289757712|ref|ZP_06517090.1| conserved hypothetical protein [... 446 1e-123
gi|340626616|ref|YP_004745068.1| hypothetical protein MCAN_16181... 445 3e-123
gi|167970649|ref|ZP_02552926.1| hypothetical protein MtubH3_2245... 420 1e-115
gi|306788708|ref|ZP_07427030.1| conserved membrane protein [Myco... 355 3e-96
gi|296164477|ref|ZP_06847049.1| conserved hypothetical protein [... 255 4e-66
gi|4883461|emb|CAB43178.1| putative membrane protein [Mycobacter... 233 2e-59
gi|15827652|ref|NP_301915.1| hypothetical protein ML1270 [Mycoba... 233 2e-59
gi|118617235|ref|YP_905567.1| hypothetical protein MUL_1590 [Myc... 231 7e-59
gi|240167986|ref|ZP_04746645.1| hypothetical protein MkanA1_0163... 224 7e-57
gi|183982426|ref|YP_001850717.1| hypothetical protein MMAR_2412 ... 218 5e-55
gi|342860819|ref|ZP_08717469.1| hypothetical protein MCOL_18148 ... 208 6e-52
gi|254820960|ref|ZP_05225961.1| hypothetical protein MintA_13580... 200 2e-49
gi|254775623|ref|ZP_05217139.1| hypothetical protein MaviaA2_132... 195 5e-48
gi|118462802|ref|YP_882359.1| hypothetical protein MAV_3176 [Myc... 194 6e-48
gi|336457890|gb|EGO36883.1| trp region conserved hypothetical me... 189 4e-46
gi|108800018|ref|YP_640215.1| hypothetical protein Mmcs_3052 [My... 163 2e-38
gi|126435647|ref|YP_001071338.1| hypothetical protein Mjls_3068 ... 162 5e-38
gi|118468315|ref|YP_887532.1| hypothetical protein MSMEG_3218 [M... 155 3e-36
gi|333990774|ref|YP_004523388.1| hypothetical protein JDM601_213... 150 1e-34
gi|169629731|ref|YP_001703380.1| hypothetical protein MAB_2646c ... 143 2e-32
gi|41407402|ref|NP_960238.1| hypothetical protein MAP1304 [Mycob... 126 3e-27
gi|120403799|ref|YP_953628.1| hypothetical protein Mvan_2815 [My... 122 4e-26
gi|145224185|ref|YP_001134863.1| hypothetical protein Mflv_3601 ... 116 3e-24
gi|326382633|ref|ZP_08204324.1| hypothetical protein SCNU_06835 ... 101 1e-19
gi|262202842|ref|YP_003274050.1| hypothetical protein Gbro_2949 ... 92.4 5e-17
gi|296139753|ref|YP_003646996.1| trp region hypothetical protein... 82.4 5e-14
gi|343926614|ref|ZP_08766113.1| hypothetical protein GOALK_066_0... 80.1 2e-13
gi|260578035|ref|ZP_05845958.1| membrane protein [Corynebacteriu... 71.2 1e-10
gi|68535871|ref|YP_250576.1| hypothetical protein jk0796 [Coryne... 69.7 3e-10
gi|226360155|ref|YP_002777933.1| hypothetical protein ROP_07410 ... 68.6 7e-10
gi|333919125|ref|YP_004492706.1| membrane protein [Amycolicicocc... 62.8 4e-08
gi|172040846|ref|YP_001800560.1| hypothetical protein cur_1166 [... 62.0 8e-08
gi|340794176|ref|YP_004759639.1| hypothetical protein CVAR_1210 ... 60.8 1e-07
gi|336325393|ref|YP_004605359.1| hypothetical protein CRES_0839 ... 59.3 4e-07
gi|25028548|ref|NP_738602.1| hypothetical protein CE1992 [Coryne... 58.9 6e-07
gi|255325291|ref|ZP_05366397.1| trp region conserved hypothetica... 58.2 9e-07
gi|111018028|ref|YP_701000.1| hypothetical protein RHA1_ro01015 ... 57.4 2e-06
gi|300858772|ref|YP_003783755.1| hypothetical protein cpfrc_0135... 56.2 4e-06
gi|262184430|ref|ZP_06043851.1| hypothetical protein CaurA7_1059... 56.2 4e-06
gi|54023827|ref|YP_118069.1| hypothetical protein nfa18590 [Noca... 55.8 5e-06
gi|19553289|ref|NP_601291.1| hypothetical protein NCgl2011 [Cory... 55.5 6e-06
gi|227503331|ref|ZP_03933380.1| conserved hypothetical protein [... 54.7 1e-05
gi|227833439|ref|YP_002835146.1| hypothetical protein cauri_1615... 54.7 1e-05
gi|227504742|ref|ZP_03934791.1| conserved hypothetical protein [... 54.7 1e-05
gi|344044762|gb|EGV40437.1| hypothetical protein CgS9114_07636 [... 54.3 1e-05
gi|38234131|ref|NP_939898.1| hypothetical protein DIP1556 [Coryn... 53.9 2e-05
gi|334697190|gb|AEG81987.1| putative membrane protein [Corynebac... 53.9 2e-05
gi|337291078|ref|YP_004630099.1| hypothetical protein CULC22_014... 53.5 2e-05
gi|306836430|ref|ZP_07469406.1| conserved hypothetical protein [... 53.5 3e-05
>gi|15608748|ref|NP_216126.1| hypothetical protein Rv1610 [Mycobacterium tuberculosis H37Rv]
gi|15841063|ref|NP_336100.1| hypothetical protein MT1645 [Mycobacterium tuberculosis CDC1551]
gi|31792796|ref|NP_855289.1| hypothetical protein Mb1636 [Mycobacterium bovis AF2122/97]
44 more sequence titles
Length=235
Score = 448 bits (1153), Expect = 3e-124, Method: Compositional matrix adjust.
Identities = 234/235 (99%), Positives = 235/235 (100%), Gaps = 0/235 (0%)
Query 1 VAANAGSVRPNRRARPMIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGA 60
+AANAGSVRPNRRARPMIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGA
Sbjct 1 MAANAGSVRPNRRARPMIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGA 60
Query 61 SWSTALLPLALLMLAAAVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGA 120
SWSTALLPLALLMLAAAVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGA
Sbjct 61 SWSTALLPLALLMLAAAVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGA 120
Query 121 DLAHVPVVTLVGSARHYWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRAR 180
DLAHVPVVTLVGSARHYWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRAR
Sbjct 121 DLAHVPVVTLVGSARHYWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRAR 180
Query 181 RSIARRQHSNAAGRAAPQDDGPDMGPRMSERMIWEALDEGRDPTDREQESDTEGR 235
RSIARRQHSNAAGRAAPQDDGPDMGPRMSERMIWEALDEGRDPTDREQESDTEGR
Sbjct 181 RSIARRQHSNAAGRAAPQDDGPDMGPRMSERMIWEALDEGRDPTDREQESDTEGR 235
>gi|289757712|ref|ZP_06517090.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|289713276|gb|EFD77288.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
Length=235
Score = 446 bits (1147), Expect = 1e-123, Method: Compositional matrix adjust.
Identities = 233/235 (99%), Positives = 234/235 (99%), Gaps = 0/235 (0%)
Query 1 VAANAGSVRPNRRARPMIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGA 60
+AANAGSVRPNRRARPMIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGA
Sbjct 1 MAANAGSVRPNRRARPMIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGA 60
Query 61 SWSTALLPLALLMLAAAVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGA 120
SWSTAL PLALLMLAAAVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGA
Sbjct 61 SWSTALRPLALLMLAAAVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGA 120
Query 121 DLAHVPVVTLVGSARHYWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRAR 180
DLAHVPVVTLVGSARHYWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRAR
Sbjct 121 DLAHVPVVTLVGSARHYWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRAR 180
Query 181 RSIARRQHSNAAGRAAPQDDGPDMGPRMSERMIWEALDEGRDPTDREQESDTEGR 235
RSIARRQHSNAAGRAAPQDDGPDMGPRMSERMIWEALDEGRDPTDREQESDTEGR
Sbjct 181 RSIARRQHSNAAGRAAPQDDGPDMGPRMSERMIWEALDEGRDPTDREQESDTEGR 235
>gi|340626616|ref|YP_004745068.1| hypothetical protein MCAN_16181 [Mycobacterium canettii CIPT
140010059]
gi|340004806|emb|CCC43950.1| putative conserved membrane protein [Mycobacterium canettii CIPT
140010059]
Length=235
Score = 445 bits (1144), Expect = 3e-123, Method: Compositional matrix adjust.
Identities = 232/235 (99%), Positives = 233/235 (99%), Gaps = 0/235 (0%)
Query 1 VAANAGSVRPNRRARPMIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGA 60
+AANAGSVRPNRRARPMIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGA
Sbjct 1 MAANAGSVRPNRRARPMIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGA 60
Query 61 SWSTALLPLALLMLAAAVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGA 120
SWSTALLPLALLMLAAAVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGA
Sbjct 61 SWSTALLPLALLMLAAAVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGA 120
Query 121 DLAHVPVVTLVGSARHYWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRAR 180
DLAHVPVVTLVGSARHYWGAVAAVLAAVCALL AVFLM SAAIRGSAGEDMARYAAPRAR
Sbjct 121 DLAHVPVVTLVGSARHYWGAVAAVLAAVCALLGAVFLMRSAAIRGSAGEDMARYAAPRAR 180
Query 181 RSIARRQHSNAAGRAAPQDDGPDMGPRMSERMIWEALDEGRDPTDREQESDTEGR 235
RSIARRQHSNAAGRAAPQDDGPDMGPRMSERMIWEALDEGRDPTDREQESDTEGR
Sbjct 181 RSIARRQHSNAAGRAAPQDDGPDMGPRMSERMIWEALDEGRDPTDREQESDTEGR 235
>gi|167970649|ref|ZP_02552926.1| hypothetical protein MtubH3_22458 [Mycobacterium tuberculosis
H37Ra]
gi|254550613|ref|ZP_05141060.1| hypothetical protein Mtube_09152 [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
gi|297634163|ref|ZP_06951943.1| hypothetical protein MtubK4_08577 [Mycobacterium tuberculosis
KZN 4207]
27 more sequence titles
Length=219
Score = 420 bits (1079), Expect = 1e-115, Method: Compositional matrix adjust.
Identities = 219/219 (100%), Positives = 219/219 (100%), Gaps = 0/219 (0%)
Query 17 MIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLMLAA 76
MIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLMLAA
Sbjct 1 MIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLMLAA 60
Query 77 AVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGADLAHVPVVTLVGSARH 136
AVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGADLAHVPVVTLVGSARH
Sbjct 61 AVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGADLAHVPVVTLVGSARH 120
Query 137 YWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRARRSIARRQHSNAAGRAA 196
YWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRARRSIARRQHSNAAGRAA
Sbjct 121 YWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRARRSIARRQHSNAAGRAA 180
Query 197 PQDDGPDMGPRMSERMIWEALDEGRDPTDREQESDTEGR 235
PQDDGPDMGPRMSERMIWEALDEGRDPTDREQESDTEGR
Sbjct 181 PQDDGPDMGPRMSERMIWEALDEGRDPTDREQESDTEGR 219
>gi|306788708|ref|ZP_07427030.1| conserved membrane protein [Mycobacterium tuberculosis SUMu004]
gi|308334723|gb|EFP23574.1| conserved membrane protein [Mycobacterium tuberculosis SUMu004]
Length=201
Score = 355 bits (911), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 189/189 (100%), Positives = 189/189 (100%), Gaps = 0/189 (0%)
Query 17 MIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLMLAA 76
MIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLMLAA
Sbjct 1 MIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLMLAA 60
Query 77 AVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGADLAHVPVVTLVGSARH 136
AVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGADLAHVPVVTLVGSARH
Sbjct 61 AVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGADLAHVPVVTLVGSARH 120
Query 137 YWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRARRSIARRQHSNAAGRAA 196
YWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRARRSIARRQHSNAAGRAA
Sbjct 121 YWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRARRSIARRQHSNAAGRAA 180
Query 197 PQDDGPDMG 205
PQDDGPDMG
Sbjct 181 PQDDGPDMG 189
>gi|296164477|ref|ZP_06847049.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295900175|gb|EFG79609.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=229
Score = 255 bits (651), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 150/231 (65%), Positives = 171/231 (75%), Gaps = 10/231 (4%)
Query 9 RPNRRARPMIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLP 68
RPNRRAR +G+AQ+LLV +A ALW A+RLPWVVI SFD LGPP+EVTL+GASWSTALLP
Sbjct 5 RPNRRARVAVGVAQVLLVGSAAALWAASRLPWVVIRSFDGLGPPREVTLSGASWSTALLP 64
Query 69 LALLMLAAAVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGADLAHVPVV 128
LA+LMLA AVAA+AVRGWPLR LA LLA AS AVGYLGISLW +PDVA RGADLAHV V+
Sbjct 65 LAVLMLATAVAAIAVRGWPLRVLAGLLAVASLAVGYLGISLWALPDVAVRGADLAHVTVM 124
Query 129 TLVGSARHYWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRARRSIARRQH 188
+LVGS R Y GA AV AA C L+AAV L+ SA SA +YAAP RRS A R
Sbjct 125 SLVGSERRYTGAGVAVGAAACTLVAAVLLLRSAGDSKSARLSAEKYAAPATRRSNALRDD 184
Query 189 SNAAGRAAPQDDGPDMGPRMSERMIWEALDEG----RDPTDREQESDTEGR 235
++ A P P M+ERM+W+ALDEG RDPTDR + SDTEGR
Sbjct 185 ADGAMLEQPGT------PEMTERMLWDALDEGSDPTRDPTDRPRGSDTEGR 229
>gi|4883461|emb|CAB43178.1| putative membrane protein [Mycobacterium leprae]
Length=264
Score = 233 bits (593), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 151/228 (67%), Positives = 171/228 (75%), Gaps = 12/228 (5%)
Query 8 VRPNRRARPMIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALL 67
++ R R I IAQLLLVVAAGALWMAARLPWVVI SFD LGPPKEV L+GASWS LL
Sbjct 5 IKSARAGRLTIQIAQLLLVVAAGALWMAARLPWVVIRSFDGLGPPKEVALSGASWSAVLL 64
Query 68 PLALLMLAAAVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGADLAHVPV 127
PLALLMLAA VAA+AVRGWPLR LA LLA ASF VGYLG+SLWV+PDV RGA LAHV +
Sbjct 65 PLALLMLAATVAAIAVRGWPLRVLAGLLAVASFLVGYLGVSLWVLPDVTVRGAVLAHVSL 124
Query 128 VTLVGSARHYWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRARRSIARRQ 187
++LVGS RH+ GA AAV A+ C L+AAV LM SA++ GSA + ++Y P RRSIARR
Sbjct 125 LSLVGSQRHHLGAGAAVAASGCTLIAAVLLMRSASVIGSARQGTSKYVVPAQRRSIARR- 183
Query 188 HSNAAGRAAPQDDGPDMGPRMSERMIWEALDEGRDPTDREQESDTEGR 235
+ A A Q MSERMIW+ALDE RDPTDR +E DTEGR
Sbjct 184 --DGAATAISQ---------MSERMIWDALDEDRDPTDRLREPDTEGR 220
>gi|15827652|ref|NP_301915.1| hypothetical protein ML1270 [Mycobacterium leprae TN]
gi|221230129|ref|YP_002503545.1| hypothetical protein MLBr_01270 [Mycobacterium leprae Br4923]
gi|13093203|emb|CAC31651.1| possible conserved membrane protein [Mycobacterium leprae]
gi|219933236|emb|CAR71365.1| possible conserved membrane protein [Mycobacterium leprae Br4923]
Length=265
Score = 233 bits (593), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 151/228 (67%), Positives = 171/228 (75%), Gaps = 12/228 (5%)
Query 8 VRPNRRARPMIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALL 67
++ R R I IAQLLLVVAAGALWMAARLPWVVI SFD LGPPKEV L+GASWS LL
Sbjct 6 IKSARAGRLTIQIAQLLLVVAAGALWMAARLPWVVIRSFDGLGPPKEVALSGASWSAVLL 65
Query 68 PLALLMLAAAVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGADLAHVPV 127
PLALLMLAA VAA+AVRGWPLR LA LLA ASF VGYLG+SLWV+PDV RGA LAHV +
Sbjct 66 PLALLMLAATVAAIAVRGWPLRVLAGLLAVASFLVGYLGVSLWVLPDVTVRGAVLAHVSL 125
Query 128 VTLVGSARHYWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRARRSIARRQ 187
++LVGS RH+ GA AAV A+ C L+AAV LM SA++ GSA + ++Y P RRSIARR
Sbjct 126 LSLVGSQRHHLGAGAAVAASGCTLIAAVLLMRSASVIGSARQGTSKYVVPAQRRSIARR- 184
Query 188 HSNAAGRAAPQDDGPDMGPRMSERMIWEALDEGRDPTDREQESDTEGR 235
+ A A Q MSERMIW+ALDE RDPTDR +E DTEGR
Sbjct 185 --DGAATAISQ---------MSERMIWDALDEDRDPTDRLREPDTEGR 221
>gi|118617235|ref|YP_905567.1| hypothetical protein MUL_1590 [Mycobacterium ulcerans Agy99]
gi|118569345|gb|ABL04096.1| conserved hypothetical membrane protein [Mycobacterium ulcerans
Agy99]
Length=231
Score = 231 bits (589), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 151/227 (67%), Positives = 172/227 (76%), Gaps = 4/227 (1%)
Query 9 RPNRRARPMIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLP 68
R R +R MIGIAQLLLV++AG LW+A+RL WVVI SFD LGPPKEVTL+GA+WSTALLP
Sbjct 9 RARRNSRLMIGIAQLLLVISAGVLWIASRLGWVVIRSFDGLGPPKEVTLSGATWSTALLP 68
Query 69 LALLMLAAAVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGADLAHVPVV 128
+ALLMLAAAVAALAVRGWPLR LA LLA S AVGYLG+SLWV+PDVA RGA+LA V V+
Sbjct 69 MALLMLAAAVAALAVRGWPLRGLAALLAMVSLAVGYLGVSLWVIPDVALRGAELAQVSVI 128
Query 129 TLVGSARHYWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRARRSIARRQH 188
TLVGS RHY GA AV A VC L AA LM A+I S G++ +YA P +RRS+AR Q
Sbjct 129 TLVGSGRHYVGAGLAVGAVVCTLAAAALLMRLASIVESLGDNATKYATPASRRSVARAQD 188
Query 189 SNAAGRAAPQDDGPDMGPRMSERMIWEALDEGRDPTDREQESDTEGR 235
+ A A + D MSER IW+ALDEGRDPTDR E DTEGR
Sbjct 189 AAIATEKASKSAELD----MSERTIWDALDEGRDPTDRPPEPDTEGR 231
>gi|240167986|ref|ZP_04746645.1| hypothetical protein MkanA1_01630 [Mycobacterium kansasii ATCC
12478]
Length=219
Score = 224 bits (571), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 156/233 (67%), Positives = 178/233 (77%), Gaps = 17/233 (7%)
Query 4 NAGSVRPNR-RARPMIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASW 62
+AG R R +R MIG+AQLLLV+AAGALW A+RLPWV I SFD LGPP++V LTGA+W
Sbjct 3 DAGPGRSRRLTSRLMIGMAQLLLVIAAGALWAASRLPWVGIRSFDGLGPPRQVILTGATW 62
Query 63 STALLPLALLMLAAAVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGADL 122
STALLP+A+L+LAAAVAALAVRGWPLR LA LLAA SFAVGYLGISLWV+PDVAARGA+L
Sbjct 63 STALLPVAMLLLAAAVAALAVRGWPLRVLAALLAATSFAVGYLGISLWVIPDVAARGAEL 122
Query 123 AHVPVVTLVGSARHYWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRARRS 182
AHVP+ LVGS R+YWGA AV AAVC L+AA L+ SA+I GSA +YA P AR++
Sbjct 123 AHVPLTALVGSGRYYWGAAVAVGAAVCILMAAAVLLRSASIAGSAHPGPTKYAGPAARQA 182
Query 183 IARRQHSNAAGRAAPQDDGPDMGPRMSERMIWEALDEGRDPTDREQESDTEGR 235
ARR DDGP MSERMIW+ALD G DPTDR Q SDTEGR
Sbjct 183 TARR-----------DDDGP-----MSERMIWDALDHGVDPTDRPQGSDTEGR 219
>gi|183982426|ref|YP_001850717.1| hypothetical protein MMAR_2412 [Mycobacterium marinum M]
gi|183175752|gb|ACC40862.1| conserved hypothetical membrane protein [Mycobacterium marinum
M]
Length=215
Score = 218 bits (555), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 150/219 (69%), Positives = 171/219 (79%), Gaps = 4/219 (1%)
Query 17 MIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLMLAA 76
MIGIAQLLLV++AG LW+A+RL WVVI SFD LGPPKEVTL+GA+WSTALLP+ALLMLAA
Sbjct 1 MIGIAQLLLVISAGVLWIASRLGWVVIRSFDGLGPPKEVTLSGATWSTALLPMALLMLAA 60
Query 77 AVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGADLAHVPVVTLVGSARH 136
AVAALAVRGWPLR LA LLA S AVGYLG+SLWV+PDVA RGA+LA V V+TLVGS RH
Sbjct 61 AVAALAVRGWPLRGLAALLAMVSLAVGYLGVSLWVIPDVALRGAELAQVSVITLVGSGRH 120
Query 137 YWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRARRSIARRQHSNAAGRAA 196
Y GA AV AAVC L AA LM SA+I S G++ +YA+P +RRS+AR Q + A A
Sbjct 121 YVGAGLAVGAAVCTLAAAALLMRSASIVESLGDNATKYASPASRRSVARAQDAAIATEKA 180
Query 197 PQDDGPDMGPRMSERMIWEALDEGRDPTDREQESDTEGR 235
+ D MSER IW+ALDEGRDPTDR E DTEGR
Sbjct 181 SKSAELD----MSERTIWDALDEGRDPTDRPPEPDTEGR 215
>gi|342860819|ref|ZP_08717469.1| hypothetical protein MCOL_18148 [Mycobacterium colombiense CECT
3035]
gi|342131843|gb|EGT85100.1| hypothetical protein MCOL_18148 [Mycobacterium colombiense CECT
3035]
Length=227
Score = 208 bits (529), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 152/233 (66%), Positives = 178/233 (77%), Gaps = 11/233 (4%)
Query 3 ANAGSVRPNRRARPMIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASW 62
A AG+ RPN +R +I IAQ +LV+AAG LW+A+RLPWVVI SFD LGPPK+VTL GA+W
Sbjct 6 AGAGTRRPN--SRWLIRIAQAVLVIAAGTLWLASRLPWVVIRSFDGLGPPKQVTLAGAAW 63
Query 63 STALLPLALLMLAAAVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGADL 122
STALLPLALL+LAAAVAA+AVRGW LRALA LLA S AVGYLG+SLWV+PDVA RGA+L
Sbjct 64 STALLPLALLLLAAAVAAIAVRGWLLRALAGLLAVVSLAVGYLGVSLWVLPDVAVRGAEL 123
Query 123 AHVPVVTLVGSARHYWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRARRS 182
AHV V++LVGS R Y GA V AA C L+AAV LM SA+ GS ++YAAP RRS
Sbjct 124 AHVSVMSLVGSERLYGGAGVTVAAAACTLIAAVLLMRSASDSGST---RSKYAAPATRRS 180
Query 183 IARRQHSNAAGRAAPQDDGPDMGPRMSERMIWEALDEGRDPTDREQESDTEGR 235
IARR+ ++ A + P MSERMIW+ALDEGRDPTDR ESD+EGR
Sbjct 181 IARREEADGAMLEQAET------PGMSERMIWDALDEGRDPTDRPNESDSEGR 227
>gi|254820960|ref|ZP_05225961.1| hypothetical protein MintA_13580 [Mycobacterium intracellulare
ATCC 13950]
Length=226
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 151/222 (69%), Positives = 170/222 (77%), Gaps = 12/222 (5%)
Query 17 MIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLMLAA 76
+I IAQ LVVAAGALW A+RLPWVVI SFD LGPPKEVTL+G +WSTALLPLA+L+LAA
Sbjct 14 LIRIAQATLVVAAGALWAASRLPWVVIRSFDGLGPPKEVTLSGGAWSTALLPLAMLLLAA 73
Query 77 AVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGADLAHVPVVTLVGSARH 136
AVAA+AVRGWPLRALA LLA AS AVGYLG+SLWV+PDVA RGA+LAHV V++LVGS R
Sbjct 74 AVAAIAVRGWPLRALAGLLALASLAVGYLGVSLWVLPDVAVRGAELAHVSVMSLVGSERR 133
Query 137 YWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRARRSIARRQHSNAA---G 193
YWGA V AA CAL+AAV LM SA+ GSA +Y P RRSIARR ++ A G
Sbjct 134 YWGAGVTVAAAACALIAAVLLMRSASDSGSARSSAIKYTTPATRRSIARRDDASGAMLEG 193
Query 194 RAAPQDDGPDMGPRMSERMIWEALDEGRDPTDREQESDTEGR 235
R P+ MSERMIW+ALDEGRDPTD ESDTEGR
Sbjct 194 RQTPE---------MSERMIWDALDEGRDPTDAPSESDTEGR 226
>gi|254775623|ref|ZP_05217139.1| hypothetical protein MaviaA2_13273 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=226
Score = 195 bits (495), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 144/221 (66%), Positives = 164/221 (75%), Gaps = 6/221 (2%)
Query 15 RPMIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLML 74
R +I IAQLLLV+AA LW+AARLPWVVI SFD LGPPK VTL+G +WSTALLPLALL+L
Sbjct 12 RWLIRIAQLLLVIAAVGLWVAARLPWVVIRSFDGLGPPKAVTLSGGTWSTALLPLALLLL 71
Query 75 AAAVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGADLAHVPVVTLVGSA 134
AAAVAA+AVRGW LRALA LLA AS AVGYLG+SLWV+PDVA RG +LAH+ V++LVGS
Sbjct 72 AAAVAAIAVRGWLLRALAGLLAVASLAVGYLGVSLWVLPDVAVRGTELAHLSVISLVGSE 131
Query 135 RHYWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRARRSIARRQHSNAAGR 194
R Y GA V AA L+AAV LM SA+ SA +YA P RRSI RR ++ A
Sbjct 132 RRYLGAGITVAAAALTLIAAVLLMRSASDPKSARSSALKYATPATRRSITRRNAADGAML 191
Query 195 AAPQDDGPDMGPRMSERMIWEALDEGRDPTDREQESDTEGR 235
P+ P MSERMIW+ALDEGRDPTDR SDTEGR
Sbjct 192 EQPET------PEMSERMIWDALDEGRDPTDRPSGSDTEGR 226
>gi|118462802|ref|YP_882359.1| hypothetical protein MAV_3176 [Mycobacterium avium 104]
gi|118164089|gb|ABK64986.1| trp region conserved hypothetical membrane protein [Mycobacterium
avium 104]
Length=226
Score = 194 bits (494), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 144/221 (66%), Positives = 163/221 (74%), Gaps = 6/221 (2%)
Query 15 RPMIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLML 74
R +I IAQLLLV+AA LW+AARLPWVVI SFD LGPPK VTL+G +WSTALLPLALL+L
Sbjct 12 RWLIRIAQLLLVIAAVGLWVAARLPWVVIRSFDGLGPPKAVTLSGGTWSTALLPLALLLL 71
Query 75 AAAVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGADLAHVPVVTLVGSA 134
AAAVAA+AVRGW LRALA LLA AS AVGYLG+SLW VPDVA RG +LAH+ V++LVGS
Sbjct 72 AAAVAAIAVRGWLLRALAGLLAVASLAVGYLGVSLWAVPDVAVRGTELAHLSVISLVGSE 131
Query 135 RHYWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRARRSIARRQHSNAAGR 194
R Y GA V AA L+AAV LM SA+ SA +YA P RRSI RR ++ A
Sbjct 132 RRYLGAGITVAAAALTLIAAVLLMRSASDPKSARSSAMKYATPATRRSITRRNAADGAML 191
Query 195 AAPQDDGPDMGPRMSERMIWEALDEGRDPTDREQESDTEGR 235
P+ P MSERMIW+ALDEGRDPTDR SDTEGR
Sbjct 192 EQPET------PEMSERMIWDALDEGRDPTDRPSGSDTEGR 226
>gi|336457890|gb|EGO36883.1| trp region conserved hypothetical membrane protein [Mycobacterium
avium subsp. paratuberculosis S397]
Length=226
Score = 189 bits (479), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 142/221 (65%), Positives = 162/221 (74%), Gaps = 6/221 (2%)
Query 15 RPMIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLML 74
R +I IAQLLLV+AA LW+AARLPWVVI SFD LGPPK VTL+G +WSTALLPLALL+L
Sbjct 12 RWLIRIAQLLLVIAAVGLWVAARLPWVVIRSFDGLGPPKAVTLSGGTWSTALLPLALLLL 71
Query 75 AAAVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGADLAHVPVVTLVGSA 134
AAAVAA+AVRGW LRALA LLA AS AVGYLG+SLWV+ DVA RG +LAH+ V++LVGS
Sbjct 72 AAAVAAIAVRGWLLRALAGLLAVASLAVGYLGVSLWVLSDVAVRGTELAHLSVISLVGSE 131
Query 135 RHYWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRARRSIARRQHSNAAGR 194
R Y GA V AA L+AAV LM SA+ SA +YA P RRSI RR ++ A
Sbjct 132 RRYLGAGITVAAAALTLIAAVLLMRSASDPKSARSSAMKYATPATRRSITRRNAADGAML 191
Query 195 AAPQDDGPDMGPRMSERMIWEALDEGRDPTDREQESDTEGR 235
+ P MSERMIW+ALDEGRDPTDR SDTEGR
Sbjct 192 EQLET------PEMSERMIWDALDEGRDPTDRPSGSDTEGR 226
>gi|108800018|ref|YP_640215.1| hypothetical protein Mmcs_3052 [Mycobacterium sp. MCS]
gi|119869143|ref|YP_939095.1| hypothetical protein Mkms_3111 [Mycobacterium sp. KMS]
gi|108770437|gb|ABG09159.1| Trp region conserved hypothetical membrane protein [Mycobacterium
sp. MCS]
gi|119695232|gb|ABL92305.1| trp region conserved hypothetical membrane protein [Mycobacterium
sp. KMS]
Length=198
Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 125/219 (58%), Positives = 151/219 (69%), Gaps = 21/219 (9%)
Query 17 MIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLMLAA 76
M IAQL+LV+ A LW+A+RL WV + SFD LG PK TLTGA W+TAL+PLALL+LAA
Sbjct 1 MTRIAQLVLVLGAAVLWVASRLTWVEVRSFDGLGQPKTSTLTGAEWATALIPLALLVLAA 60
Query 77 AVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGADLAHVPVVTLVGSARH 136
AVA LAVRGWPLR LAVL+AAAS + YL I+LWV+ DVA R A+LA VPV L G+ RH
Sbjct 61 AVAVLAVRGWPLRILAVLVAAASAGMAYLAITLWVIVDVAPRAANLAEVPVADLTGTERH 120
Query 137 YWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRARRSIARRQHSNAAGRAA 196
+ GAV ++AA L AV LM AA++G+ G +RYAAP ARR+ A +Q
Sbjct 121 FTGAVLTLVAAALVLAGAVLLM-RAAVKGTGG--TSRYAAPSARRATATKQE-------- 169
Query 197 PQDDGPDMGPRMSERMIWEALDEGRDPTDREQESDTEGR 235
D G MSERM+W+ALDEG DPTDR DT+GR
Sbjct 170 ------DKGEPMSERMLWDALDEGHDPTDR----DTKGR 198
>gi|126435647|ref|YP_001071338.1| hypothetical protein Mjls_3068 [Mycobacterium sp. JLS]
gi|126235447|gb|ABN98847.1| trp region conserved hypothetical membrane protein [Mycobacterium
sp. JLS]
Length=198
Score = 162 bits (409), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 125/219 (58%), Positives = 150/219 (69%), Gaps = 21/219 (9%)
Query 17 MIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLMLAA 76
M IAQL+LV+ A LW+A+RL WV + SFD LG PK TLTGA W+TAL+PLALL+LAA
Sbjct 1 MTRIAQLVLVLGAAVLWVASRLTWVEVRSFDGLGQPKTSTLTGAEWATALIPLALLVLAA 60
Query 77 AVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGADLAHVPVVTLVGSARH 136
AVA LAVRGWPLR LAVL+AAAS + YL I+LWV+ DVA R A+LA VPV L G+ RH
Sbjct 61 AVAVLAVRGWPLRILAVLVAAASAGMAYLAITLWVIVDVAPRAANLAEVPVADLTGTERH 120
Query 137 YWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRARRSIARRQHSNAAGRAA 196
+ GAV ++AA L AV LM AA++G+ G +RYAAP ARR+ A Q
Sbjct 121 FTGAVLTLVAAALVLAGAVLLM-RAAVKGTGG--TSRYAAPSARRATATEQE-------- 169
Query 197 PQDDGPDMGPRMSERMIWEALDEGRDPTDREQESDTEGR 235
D G MSERM+W+ALDEG DPTDR DT+GR
Sbjct 170 ------DKGEPMSERMLWDALDEGHDPTDR----DTKGR 198
>gi|118468315|ref|YP_887532.1| hypothetical protein MSMEG_3218 [Mycobacterium smegmatis str.
MC2 155]
gi|118169602|gb|ABK70498.1| trp region conserved hypothetical membrane protein [Mycobacterium
smegmatis str. MC2 155]
Length=204
Score = 155 bits (393), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 106/203 (53%), Positives = 124/203 (62%), Gaps = 17/203 (8%)
Query 32 LWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLMLAAAVAALAVRGWPLRAL 91
LW A+R WV + SFD LG PK LTGASWSTAL+PLALL LAAAVAALAVRGW LR L
Sbjct 16 LWGASRFNWVEVRSFDGLGQPKTTALTGASWSTALIPLALLALAAAVAALAVRGWMLRLL 75
Query 92 AVLLAAASFAVGYLGISLWVVPDVAARGADLAHVPVVTLVGSARHYWGAVAAVLAAVCAL 151
A+L+AAAS +GYL ISLW V DVA R ADLA VPV L G+ R+Y GAV + AAVC L
Sbjct 76 AILVAAASAGMGYLAISLWAVRDVAVRAADLALVPVAQLTGTHRYYTGAVITLAAAVCTL 135
Query 152 LAAVFLMSSAAIRGSAGEDMARYAAPRARRSIARRQHSNAAGRAAPQDDGPDMGPRMSER 211
+ AV LM SA + + QH ++ MSER
Sbjct 136 VGAVLLMRSA----NGSQRAVAARYAAPAARRTAAQHDVSS-------------ESMSER 178
Query 212 MIWEALDEGRDPTDREQESDTEG 234
MIW+ALDEG DPT + ++D G
Sbjct 179 MIWDALDEGHDPTGDQDDTDRRG 201
>gi|333990774|ref|YP_004523388.1| hypothetical protein JDM601_2134 [Mycobacterium sp. JDM601]
gi|333486742|gb|AEF36134.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=215
Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 120/228 (53%), Positives = 153/228 (68%), Gaps = 18/228 (7%)
Query 8 VRPNRRARPMIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALL 67
VR +RA + +AQLLLV+AAG LW AARLPWV+I SFD LG PK++T++GASWSTAL+
Sbjct 6 VRGGKRA---LRVAQLLLVLAAGGLWGAARLPWVLIRSFDGLGQPKDITVSGASWSTALV 62
Query 68 PLALLMLAAAVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGADLAHVPV 127
PLA + LAAAVAA+AVRGW LR LAVL+AA S A GYL +S+WVV DVA R D+A +P+
Sbjct 63 PLAWVCLAAAVAAVAVRGWKLRVLAVLMAAVSLAAGYLAVSMWVVRDVALRALDIAEIPL 122
Query 128 VTLVGSARHYWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRARRSIARRQ 187
+L+ + R GAV ++LAA+ L AA LM +AA + D A+Y P ARR++ R
Sbjct 123 TSLLAADRRLTGAVLSLLAALGVLAAAALLMRAAAHHTN---DNAKYETPAARRAVTRDA 179
Query 188 HSNAAGRAAPQDDGPDMGPRMSERMIWEALDEGRDPTDREQESDTEGR 235
+ A P MSERM+W+ALDEG DPT+ EGR
Sbjct 180 DAAAG------------TPEMSERMMWDALDEGCDPTEPPPGPAAEGR 215
>gi|169629731|ref|YP_001703380.1| hypothetical protein MAB_2646c [Mycobacterium abscessus ATCC
19977]
gi|169241698|emb|CAM62726.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=205
Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/216 (48%), Positives = 138/216 (64%), Gaps = 24/216 (11%)
Query 9 RPNRRARPMIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLP 68
P RR R ++G LLV+AAGALW+A++ WV + SFD LG P+ + ++GA WS AL+P
Sbjct 8 NPGRR-RLLMGAG--LLVIAAGALWVASKFSWVRLRSFDGLGEPRTLLVSGADWSAALVP 64
Query 69 LALLMLAAAVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGADLAHVPVV 128
LA+ ++AAA+A LAVRGW LR LAVL+A A YLG+SLW V DV R A++ +V V
Sbjct 65 LAVALIAAAIATLAVRGWALRVLAVLVAIIGAAAAYLGVSLWAVRDVGPRAAEVKNVAVS 124
Query 129 TLVGSARHYWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRARRSIARRQH 188
TLVG+ R GA+ AVLAAV ++LAA+ L+ R + G ++Y P ARRS A
Sbjct 125 TLVGADRLSGGAITAVLAAVVSVLAAITLL-----RAARGASASKYQTPAARRSEA---- 175
Query 189 SNAAGRAAPQDDGPDMGPRMSERMIWEALDEGRDPT 224
+P D G SER++W++LD+G DPT
Sbjct 176 ------VSPVDKG------QSERVMWDSLDDGHDPT 199
>gi|41407402|ref|NP_960238.1| hypothetical protein MAP1304 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41395754|gb|AAS03621.1| hypothetical protein MAP_1304 [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=143
Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/127 (75%), Positives = 107/127 (85%), Gaps = 0/127 (0%)
Query 14 ARPMIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLM 73
R +I IAQLLLV+AA LW+AARLPWVVI SFD LGPPK VTL+G +WSTALLPLALL+
Sbjct 11 GRWLIRIAQLLLVIAAVGLWVAARLPWVVIRSFDGLGPPKAVTLSGGTWSTALLPLALLL 70
Query 74 LAAAVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGADLAHVPVVTLVGS 133
LAAAVAA+AVRGW LRALA LLA AS AVGYLG+SLWV+ DVA RG +LAH+ V++LVGS
Sbjct 71 LAAAVAAIAVRGWLLRALAGLLAVASLAVGYLGVSLWVLSDVAVRGTELAHLSVISLVGS 130
Query 134 ARHYWGA 140
R Y GA
Sbjct 131 ERRYLGA 137
>gi|120403799|ref|YP_953628.1| hypothetical protein Mvan_2815 [Mycobacterium vanbaalenii PYR-1]
gi|119956617|gb|ABM13622.1| trp region conserved hypothetical membrane protein [Mycobacterium
vanbaalenii PYR-1]
Length=193
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 107/200 (54%), Positives = 127/200 (64%), Gaps = 26/200 (13%)
Query 36 ARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLMLAAAVAALAVRGWPLRALAVLL 95
+RL WV I SFD LG PK L+GA+WSTAL+PLALL+LAAA AALAVRGWPLR LAVL+
Sbjct 20 SRLTWVQITSFDGLGQPKTADLSGATWSTALIPLALLVLAAAGAALAVRGWPLRVLAVLV 79
Query 96 AAASFAVGYLGISLWVVPDVAARGADLAHVPVVTLVGSARHYWGAVAAVLAAVCALLAAV 155
AAAS +GYL ISLWV+ D A R A LA VPV L+ + RHY GA ++A V +L AV
Sbjct 80 AAASAGMGYLAISLWVMADDAVRAARLADVPVADLLDTQRHYGGAGVTLVAGVLSLAGAV 139
Query 156 FLMSSAAIRGSAGEDMARYAAPRARRSIARRQHSNAAGRAAPQDDGPDMGPRMSERMIWE 215
LM SA R + + ARY RR + + RAA MSERMIW+
Sbjct 140 LLMRSATHRRA---EAARY---------TRRTPAESDTRAAA----------MSERMIWD 177
Query 216 ALDEGRDPTDREQESDTEGR 235
ALDEG DPT+ D +GR
Sbjct 178 ALDEGHDPTN----PDNQGR 193
>gi|145224185|ref|YP_001134863.1| hypothetical protein Mflv_3601 [Mycobacterium gilvum PYR-GCK]
gi|315444520|ref|YP_004077399.1| hypothetical protein Mspyr1_29450 [Mycobacterium sp. Spyr1]
gi|145216671|gb|ABP46075.1| trp region conserved hypothetical membrane protein [Mycobacterium
gilvum PYR-GCK]
gi|315262823|gb|ADT99564.1| trp region conserved hypothetical membrane protein [Mycobacterium
sp. Spyr1]
Length=193
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 110/200 (55%), Positives = 131/200 (66%), Gaps = 26/200 (13%)
Query 36 ARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLMLAAAVAALAVRGWPLRALAVLL 95
+R+ WV I SFD LG PK L+G++WSTAL+PLALL+LAAAVAALAVRGWPLR LAVL+
Sbjct 20 SRMTWVQISSFDGLGQPKTTDLSGSTWSTALVPLALLILAAAVAALAVRGWPLRILAVLV 79
Query 96 AAASFAVGYLGISLWVVPDVAARGADLAHVPVVTLVGSARHYWGAVAAVLAAVCALLAAV 155
AAAS +GYL ISLWVV DVA R A LA VPV L+ + R Y GAV ++AA +L+ AV
Sbjct 80 AAASAGMGYLAISLWVVADVAVRAARLAEVPVADLLDTQRDYVGAVITLIAAALSLVGAV 139
Query 156 FLMSSAAIRGSAGEDMARYAAPRARRSIARRQHSNAAGRAAPQDDGPDMGPRMSERMIWE 215
+M SAA RG A + ARY RR P + P MSERMIW+
Sbjct 140 VMMRSAA-RGRA--ETARY----TRR---------------PAAEAPTEASAMSERMIWD 177
Query 216 ALDEGRDPTDREQESDTEGR 235
ALDEGRDPT+ D +GR
Sbjct 178 ALDEGRDPTN----PDNKGR 193
>gi|326382633|ref|ZP_08204324.1| hypothetical protein SCNU_06835 [Gordonia neofelifaecis NRRL
B-59395]
gi|326198752|gb|EGD55935.1| hypothetical protein SCNU_06835 [Gordonia neofelifaecis NRRL
B-59395]
Length=229
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/210 (35%), Positives = 110/210 (53%), Gaps = 7/210 (3%)
Query 20 IAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLMLAAAVA 79
IA +L+++AA LW A+R+ W I +LGP + T+ G+ WS L P+ + M AA VA
Sbjct 23 IASVLILLAALGLWGASRMKWATILVAPDLGPARVFTVNGSDWSPWLTPVGIAMAAAVVA 82
Query 80 ALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGADLAHVPVVTLV-GSARHYW 138
A+RGW LR +A+L+A ISL + + VP ++ G
Sbjct 83 QFALRGWALRIVAILVALGGVLAVIPAISLLTEGENNLYIVKMVDVPARAVIDGIPTEST 142
Query 139 GAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRARRSIARRQHSNAAGRAAPQ 198
+ +AVCA+L AV + +A G + ++Y++P ARR RQ + RAA
Sbjct 143 PGYLVIASAVCAILGAVAMARTARQGGMS----SKYSSPAARRDDLERQIFDERERAAAS 198
Query 199 DDGPDMGPRMSERMIWEALDEGRDPTDREQ 228
G P +ER++W++LDEG DPT+ E+
Sbjct 199 --GEPTAPAANERLLWDSLDEGIDPTEDEE 226
>gi|262202842|ref|YP_003274050.1| hypothetical protein Gbro_2949 [Gordonia bronchialis DSM 43247]
gi|262086189|gb|ACY22157.1| trp region conserved hypothetical protein [Gordonia bronchialis
DSM 43247]
Length=245
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/212 (37%), Positives = 109/212 (52%), Gaps = 26/212 (12%)
Query 32 LWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLMLAAAVAALAVRGWPLRAL 91
W+A+RL W + + D L P +E T++GA WS L PLAL++LAA AA +VRGW LRAL
Sbjct 34 FWVASRLTWATVFAEDHLSPNREFTVSGADWSPWLTPLALVLLAAIAAAFSVRGWALRAL 93
Query 92 AVLLAAASFAVGYLGISLWVVPDVAARGADLAHVPV-VTLVGSARHYWGAVAAVLAAVCA 150
A+L+AA + ISL +A A +P ++G + W A ++ VC
Sbjct 94 AILVAAGGVLAAFPAISLVTGGADSAYAAQAGDIPDRFQILGIDTNGWVAAVVLIGTVCC 153
Query 151 LLAAVFLMSSAAIRGSAGEDMARYAAPRARRSIARRQ----HSN-------------AAG 193
++A V L+ A G+A ++Y P ARR R+ H A G
Sbjct 154 VIAGVALLRIA--NGAAMS--SKYQTPAARREELERKIFADHERRKAAATEAAPPPGAGG 209
Query 194 RAAPQDDGPDMGPRMSERMIWEALDEGRDPTD 225
P D P+ P +ERM+W+ALD G DPTD
Sbjct 210 ETTP--DSPE--PTANERMMWDALDTGIDPTD 237
>gi|296139753|ref|YP_003646996.1| trp region hypothetical protein [Tsukamurella paurometabola DSM
20162]
gi|296027887|gb|ADG78657.1| trp region conserved hypothetical protein [Tsukamurella paurometabola
DSM 20162]
Length=211
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/211 (37%), Positives = 116/211 (55%), Gaps = 20/211 (9%)
Query 18 IGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLMLAAA 77
+ +A LL++AAGA+W A+R+ W+ + D L P ++V + G +W++AL L L+ LAA
Sbjct 7 VAVASGLLLLAAGAVWGASRMTWMRVSVNDFLQPGRDVDIAGHTWASALNVLPLVFLAAI 66
Query 78 VAALAVRGWPLRALAVLLAAASFAVGYLGIS-LWVVPDVAARGADLAHVPVVTLVGSARH 136
AA+AV+GW A+AV++AAA+ + + L PDVA L P +V + +
Sbjct 67 AAAIAVKGWARVAVAVVVAAAAIGSAFPALQVLTQEPDVAYIEQILELAPKDIVVQADKL 126
Query 137 YWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDM-ARYAAPRARR-SIARRQHSNAAGR 194
G AVL V A++AA L+ RG G M ++Y +P ARR + +R +AA
Sbjct 127 VAGPATAVLGGVLAVIAATLLL-----RGQRGGGMDSKYTSPAARRAELEKRVFDDAAAE 181
Query 195 AAPQDDGPDMGPRMSERMIWEALDEGRDPTD 225
+ SER +W+ALD G DPT+
Sbjct 182 ES------------SERDLWDALDSGDDPTE 200
>gi|343926614|ref|ZP_08766113.1| hypothetical protein GOALK_066_00130 [Gordonia alkanivorans NBRC
16433]
gi|343763484|dbj|GAA13039.1| hypothetical protein GOALK_066_00130 [Gordonia alkanivorans NBRC
16433]
Length=261
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/246 (30%), Positives = 107/246 (44%), Gaps = 30/246 (12%)
Query 9 RPNRRARPMIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLP 68
+P RP + IA +L++ A A W A+RL W + + D L P + + G+ WS L P
Sbjct 19 KPKSSRRPQM-IAAVLMLATAAAFWGASRLTWATVSAEDGLSPQRAFDVKGSDWSPWLTP 77
Query 69 LALLMLAAAVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGADLAHVPVV 128
LAL+ LA A L+VRGW LR +A+L+AA + ISL + AD +P
Sbjct 78 LALVYLAGIAAVLSVRGWGLRLVALLVAAGGVLAAFPAISLIAGGADSEYAADAGDIPDR 137
Query 129 TLVGSARHYWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRARRSIARRQ- 187
+V W A VL +AA ++ A + ++Y P ARR +
Sbjct 138 YIVLYTDTQWLPAALVLLGTVCAVAAAVVLLRVAKGATMS---SKYKTPAARREELETEI 194
Query 188 -------------------------HSNAAGRAAPQDDGPDMGPRMSERMIWEALDEGRD 222
++A +D P +ERM+W+ALD G D
Sbjct 195 FADYERRKRAAAADSAKAGDTPADADADADAGTGGKDRRPGDDRDANERMMWDALDTGID 254
Query 223 PTDREQ 228
PTD ++
Sbjct 255 PTDPDE 260
>gi|260578035|ref|ZP_05845958.1| membrane protein [Corynebacterium jeikeium ATCC 43734]
gi|258603862|gb|EEW17116.1| membrane protein [Corynebacterium jeikeium ATCC 43734]
Length=229
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/241 (29%), Positives = 107/241 (45%), Gaps = 35/241 (14%)
Query 11 NRRARPMIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLA 70
++A+ + IA L +V++A LW A+RL +V + D+ L G+ W AL+PLA
Sbjct 8 TQKAKRIRQIALLCVVLSAAGLWGASRLKFVTVAVDDDKAGASTKELVGSVWDPALVPLA 67
Query 71 LLMLAAAVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGADLAHVPVVT- 129
L M+AA + ++AV+ R L V++ A + + + L AR L T
Sbjct 68 LAMVAALILSMAVQPMVRRVLGVVIGALAATASFRAVQLLSSDVDLARAQSLLRSGAATQ 127
Query 130 -------------LVGSARHYWGAVAAVLAAVCALLAAVFLMSSAAIR-GSAGEDMARYA 175
+V H G V +LAA ++ L+ +R G + +RY
Sbjct 128 KESDPVQISEWARVVSGEVHSLGIVLVLLAAAIGVVGGAILI----LRPGQQSKGHSRYE 183
Query 176 APRARRSIARRQHSNAAGRAAPQDDGPDMGPRMSERMIWEALDEGRDPTDREQESDT-EG 234
P RR+ A + + PD S R++W+ALD G DPT+ S T +G
Sbjct 184 TPEVRRADAEEDLA----------ENPD-----STRVLWDALDAGVDPTEESDFSRTKQG 228
Query 235 R 235
R
Sbjct 229 R 229
>gi|68535871|ref|YP_250576.1| hypothetical protein jk0796 [Corynebacterium jeikeium K411]
gi|68263470|emb|CAI36958.1| putative membrane protein [Corynebacterium jeikeium K411]
Length=244
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/256 (29%), Positives = 113/256 (45%), Gaps = 41/256 (16%)
Query 2 AANAGSVRPN------RRARPMIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEV 55
AANA S + ++A+ + IA L +V++A LW A+RL +V + D+
Sbjct 8 AANAVSAEEDVTADATQKAKRIRQIALLCVVLSAVGLWGASRLKFVTVAVDDDKAGASTK 67
Query 56 TLTGASWSTALLPLALLMLAAAVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDV 115
L G+ W AL+PLAL M+AA + ++AV+ R L V++ A + + + L
Sbjct 68 ELVGSVWDPALVPLALAMVAALILSMAVQPMVRRVLGVVIVALAATASFRAVQLLSSDVD 127
Query 116 AARGADLAHVPVVT--------------LVGSARHYWGAVAAVLAAVCALLAAVFLMSSA 161
AR L T ++ H G V +LAA ++ L+
Sbjct 128 LARAQSLLRSGAATQKESDPVQISEWARVISGDVHSLGIVLVLLAAAIGVVGGAILI--- 184
Query 162 AIR-GSAGEDMARYAAPRARRSIARRQHSNAAGRAAPQDDGPDMGPRMSERMIWEALDEG 220
+R G + +RY P RR+ A + + PD S R++W+ALD G
Sbjct 185 -LRPGQESKGHSRYETPEVRRADAEEDLA----------ENPD-----STRVLWDALDAG 228
Query 221 RDPTDREQESDT-EGR 235
DPT+ S T +GR
Sbjct 229 VDPTEESDFSRTKQGR 244
>gi|226360155|ref|YP_002777933.1| hypothetical protein ROP_07410 [Rhodococcus opacus B4]
gi|226238640|dbj|BAH48988.1| hypothetical membrane protein [Rhodococcus opacus B4]
Length=234
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/200 (34%), Positives = 100/200 (50%), Gaps = 16/200 (8%)
Query 32 LWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLMLAAAVAALAVRGWPLRAL 91
LW A+R+ WV + S D LG + L G +W+ AL PLAL ++AA A+ AV+GW LR L
Sbjct 33 LWGASRMTWVEVTSSDGLGEERTSVLVGGTWAAALTPLALTLVAAIAASFAVKGWALRVL 92
Query 92 AVLLAAASFAVGYLGISLWVVPDVAARGADLAHVPVVTLVGSARHYWGAVAAVLAAVCAL 151
VL+A + A + L V A LA +P V S + A A ++
Sbjct 93 GVLVAVVAVAAAVPAVGLLVSGASDDEAARLAELPGRAEVQSVSVH-AAPAVLVLVGALA 151
Query 152 LAAVFLMSSAAIRGSAGEDMARYAAPRARRSIARRQHSNAAGRAAPQDDGPDMGPRMSER 211
A + R AG ++Y +P ARR A++ +++AG +++R
Sbjct 152 ALAAAVELVRRPRVRAGL-SSKYDSPGARRDAAKKTGADSAGEP------------VTQR 198
Query 212 MIWEALDEGRDPT--DREQE 229
M+W+ALD G DPT D++ E
Sbjct 199 MLWDALDAGEDPTVDDKKAE 218
>gi|333919125|ref|YP_004492706.1| membrane protein [Amycolicicoccus subflavus DQS3-9A1]
gi|333481346|gb|AEF39906.1| Membrane protein [Amycolicicoccus subflavus DQS3-9A1]
Length=236
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/222 (30%), Positives = 103/222 (47%), Gaps = 5/222 (2%)
Query 4 NAGSVRPNRRARPMIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASWS 63
A +V R + +A +L++ A +W ++R W+ + D L P + + GA+W+
Sbjct 2 TAAAVEQQGRTKRRRALAMVLVLAGASLVWASSRAGWIAMSVADGLQPARLEAVIGATWA 61
Query 64 TALLPLALLMLAAAVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGADLA 123
L P+AL M AA +A L VRG R + +++A + A I + V R L
Sbjct 62 AELGPIALAMGAAVIAMLVVRGRFHRLVGIVIAVLAGAAAVSPIRVLVAGVDEDRVRQLE 121
Query 124 HVPVVTLVGS-ARHYWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRARRS 182
+PV + + W A+L A L A + + + G+A +RY P ARR
Sbjct 122 SLPVRAEIADLSLTIWAPSLALLGAAAGLAGAALAIVAPSPEGAA---RSRYQTPAARRD 178
Query 183 IARRQHSNAAGRAAPQDDGPDMGPRMSERMIWEALDEGRDPT 224
AR + R G G ++ER++W+ALD G DPT
Sbjct 179 DARAVMRDEE-RDGAISGGTAAGIPLNERLLWDALDAGEDPT 219
>gi|172040846|ref|YP_001800560.1| hypothetical protein cur_1166 [Corynebacterium urealyticum DSM
7109]
gi|171852150|emb|CAQ05126.1| putative membrane protein [Corynebacterium urealyticum DSM 7109]
Length=216
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 69/233 (30%), Positives = 102/233 (44%), Gaps = 29/233 (12%)
Query 8 VRPNRRARPMIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALL 67
+ +R R G+AQLL+++AA +W R+ W+ FD+ L GA W A
Sbjct 2 TKTEKRIR---GLAQLLVILAAAGVWGFGRMNWLTAEVFDDKSGESTHQLVGAVWDPAGT 58
Query 68 PLALLMLAAAVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGADLAHVPV 127
PLAL M+AA +A +AV R + VL+A S + + L R L V
Sbjct 59 PLALAMMAALIATMAVPPVVRRIIGVLIALLSAGASFRAVQLVGAEPDLYRAQQLLRSGV 118
Query 128 VTLVGSARHYWGAVAAVLAA-----------VCALLAAVFLMSSAAIRGSAGEDMARYAA 176
T S A A VL+A + A+L + A G++ +RY
Sbjct 119 ATQNSSNPEQISAWAQVLSAEVHNLPVLLTVIVAILGVCGGVILAMKPGASDSGYSRYET 178
Query 177 PRARRSIARRQHSNAAGRAAPQDDGPDMGPRMSERMIWEALDEGRDPTDREQE 229
P RR A++ + + PD G R++W+ALD G DPTD E++
Sbjct 179 PERRREGAKQDLT----------ENPDSG-----RVLWDALDAGVDPTDDERK 216
>gi|340794176|ref|YP_004759639.1| hypothetical protein CVAR_1210 [Corynebacterium variabile DSM
44702]
gi|340534086|gb|AEK36566.1| putative membrane protein [Corynebacterium variabile DSM 44702]
Length=228
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/227 (29%), Positives = 94/227 (42%), Gaps = 33/227 (14%)
Query 19 GIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLMLAAAV 78
+A +L +++A LW ++ W+ D+ + G W A PLAL MLAA +
Sbjct 17 NLALVLTLLSAAGLWGTGQMTWLTASVVDDKTGESTEQIIGRVWDAAGTPLALAMLAAMI 76
Query 79 AALAVRGWPLRALAVL-----LAAASFAVGYLG--------ISLWVVPDVAARGADLAHV 125
+ A+ R L + A AV LG L + D +
Sbjct 77 LSFALAPMARRVLGGISAALAAIAGFAAVMLLGGDPDLDRAQQLLTTGAATQKSTDPVQI 136
Query 126 PV-VTLVGSARHYWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRARRSIA 184
T+V ++ H + V A+LAA C ++ V L A G A + +RY P ARR
Sbjct 137 SDWATVVDASVHTFPVVLALLAAACGVVGGVLL---AMKPGEARQGHSRYETPEARREGV 193
Query 185 RRQHSNAAGRAAPQDDGPDMGPRMSERMIWEALDEGRDPTDREQESD 231
+ G S R++W+ALD G DPTDRE ESD
Sbjct 194 LEDLNEEPG---------------SGRVLWDALDAGVDPTDRE-ESD 224
>gi|336325393|ref|YP_004605359.1| hypothetical protein CRES_0839 [Corynebacterium resistens DSM
45100]
gi|336101375|gb|AEI09195.1| putative membrane protein [Corynebacterium resistens DSM 45100]
Length=220
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/227 (29%), Positives = 99/227 (44%), Gaps = 44/227 (19%)
Query 21 AQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLMLAAAVAA 80
A LL++++A LW+A RL +V D+ TL G+ W A++PLAL M+AA +
Sbjct 7 ALLLVILSAMGLWIAGRLKFVTANVSDDKAGDSVKTLVGSVWDPAMVPLALAMIAAVILT 66
Query 81 LAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGADLAHVPVVTLVGSAR----- 135
LAV+ R L ++A + + + L + DV DLA + GSA
Sbjct 67 LAVQPVVRRILGAVVALLAAVASFRSVML-LTSDV-----DLARAKSILTSGSATQRATK 120
Query 136 ---------------HYWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRAR 180
H + A++AA ++ V LM G A + +RY P R
Sbjct 121 PVQISDWAQVTDAHVHTMPVLLALVAAALGVIGGVLLMMQP---GEASKGHSRYETPENR 177
Query 181 RSIARRQHSNAAGRAAPQDDGPDMGPRMSERMIWEALDEGRDPTDRE 227
RS A+ + + PD + R +W+ +D G DPTD E
Sbjct 178 RSGAQEDLA----------ENPD-----NPRALWDVMDTGVDPTDDE 209
>gi|25028548|ref|NP_738602.1| hypothetical protein CE1992 [Corynebacterium efficiens YS-314]
gi|259507604|ref|ZP_05750504.1| membrane protein [Corynebacterium efficiens YS-314]
gi|23493833|dbj|BAC18802.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
gi|259164783|gb|EEW49337.1| membrane protein [Corynebacterium efficiens YS-314]
Length=221
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 67/222 (31%), Positives = 104/222 (47%), Gaps = 41/222 (18%)
Query 25 LVVAAGAL--WMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLMLAAAVAALA 82
L++ AGAL W+++R+ W+ + +FD+ +L GA+WST ++ LAL + AA VA L
Sbjct 9 LLIGAGALVVWISSRMTWITVEAFDDKSGATTQSLVGATWSTEIMALALALAAACVAGLV 68
Query 83 VRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGADLAHVPVVTLVGSAR------- 135
+R R + L A + +SL + + A A+ A + + V S R
Sbjct 69 LRRTGRRIVGGLAAVLAVGASLSPLSL-LTGEATAEDAERARSLLTSGVASQRASEGTLL 127
Query 136 -----------HYWGAVAAVLAAVCALLAAVFLMSSAAIR-GSAGEDMARYAAPRARRSI 183
H AV A+L AL V L A+R G+ G +R+ +AR
Sbjct 128 SEWAEITDLSTHPAAAVVALLGCALALFGGVLL----AMRPGADGVQASRFERRQAR--- 180
Query 184 ARRQHSNAAGRAAPQDDGPDMGPRMSERMIWEALDEGRDPTD 225
A + H++ + PD G R++W+ALDE DPTD
Sbjct 181 ADKIHTDL-------EQAPDSG-----RVMWDALDEDIDPTD 210
>gi|255325291|ref|ZP_05366397.1| trp region conserved hypothetical membrane protein [Corynebacterium
tuberculostearicum SK141]
gi|255297856|gb|EET77167.1| trp region conserved hypothetical membrane protein [Corynebacterium
tuberculostearicum SK141]
Length=212
Score = 58.2 bits (139), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/221 (27%), Positives = 98/221 (45%), Gaps = 31/221 (14%)
Query 23 LLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLMLAAAVAALA 82
LL+ V A LW+++R WVV S D+ + G++WS + L L+++A AVA +A
Sbjct 9 LLIAVGAIVLWLSSRATWVVAASEDDKAGSAANDIIGSAWSLEIKALTLVLVAGAVAGMA 68
Query 83 VRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAAR-------------GADLAHVPV-V 128
+R R + ++ A A+ A + +SL R D A +
Sbjct 69 LRRVGRRVVGIVCALAAAASAWTPVSLLTAGADTERAQKILQGASANENAVDSAQISDWA 128
Query 129 TLVGSARHYWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRARRSIARRQH 188
T+V + H G + A++ A AL AV L + P A ++ ++
Sbjct 129 TVVSTEVHSLGPIVALIGAAAALFGAVMLARN----------------PGADKAKVSSKY 172
Query 189 SNAAGRAAPQDDGPDMGPRMSERMIWEALDEGRDPTDREQE 229
A R A ++ + S R++W+ALD DPTD +++
Sbjct 173 ETPAARQAKLEEDLETSSD-SGRVMWDALDSDIDPTDMDKK 212
>gi|111018028|ref|YP_701000.1| hypothetical protein RHA1_ro01015 [Rhodococcus jostii RHA1]
gi|110817558|gb|ABG92842.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=215
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/199 (34%), Positives = 100/199 (51%), Gaps = 14/199 (7%)
Query 33 WMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLMLAAAVAALAVRGWPLRALA 92
W A+R+ WV + S D LG + L G +W+ AL PLAL ++AA A AV+GW LR L
Sbjct 15 WGASRMTWVEVTSSDGLGEERTSALAGGTWAAALTPLALTLVAAIAALFAVKGWALRVLG 74
Query 93 VLLAAASFAVGYLGISLWVVPDVAARGADLAHVPVVTLVGSARHYWGAVAAVLAAVCALL 152
VL+A + A + L V LA +P V S + G L A L
Sbjct 75 VLVAVVAVAAAVPAVGLIVSGASDDEAGRLAELPGRAEVQSVSVHVGPAVLALVGGVAAL 134
Query 153 AAVFLMSSAAIRGSAGEDMARYAAPRARRSIARRQHSNAAGRAAPQDDGPDMGPRMSERM 212
AA + R AG ++Y +P ARR A++ ++A +GP +++RM
Sbjct 135 AAAVELVRRP-RVRAGLS-SKYDSPGARRDAAKKAGADAG-------EGP-----VTQRM 180
Query 213 IWEALDEGRDPTDREQESD 231
+W+ALD G DPT +++++
Sbjct 181 LWDALDAGEDPTVEDKKAE 199
>gi|300858772|ref|YP_003783755.1| hypothetical protein cpfrc_01355 [Corynebacterium pseudotuberculosis
FRC41]
gi|300686226|gb|ADK29148.1| putative membrane protein [Corynebacterium pseudotuberculosis
FRC41]
gi|302206477|gb|ADL10819.1| Hypothetical protein CpC231_1348 [Corynebacterium pseudotuberculosis
C231]
gi|302331032|gb|ADL21226.1| Hypothetical protein Cp1002_1349 [Corynebacterium pseudotuberculosis
1002]
gi|308276719|gb|ADO26618.1| Putative transmembrane protein [Corynebacterium pseudotuberculosis
I19]
gi|341825160|gb|AEK92681.1| Hypothetical protein CpPAT10_1348 [Corynebacterium pseudotuberculosis
PAT10]
Length=213
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/218 (26%), Positives = 98/218 (45%), Gaps = 22/218 (10%)
Query 15 RPMIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLML 74
+PM A L+ + A A+W A+R+ W+ + ++D+ K + + GA WST +AL++L
Sbjct 4 KPMQSSA--LIGIGALAVWGASRMAWLGVEAYDDKSGSKSLNINGAMWSTEATAVALVLL 61
Query 75 AAAVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVV-PD-------VAARGADLAHVP 126
AA VA+ A+R R + ++ A+ + I L PD + + A
Sbjct 62 AACVASFALRRSGRRLVGIISGLAAAGGAWSPIQLMTTDPDRERVLKLLTSESASGHQKD 121
Query 127 VVTLVGSARHYWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRARRSIARR 186
L G + A AA+ + A+ L + + G+D AR ++ +++
Sbjct 122 GAALTGWSEIMQVTTHAPAAALAIIGCAIALFGGLVLAMNPGKDSARKNRYERKQERSQK 181
Query 187 QHSNAAGRAAPQDDGPDMGPRMSERMIWEALDEGRDPT 224
H + D PD G R++W+A+D DPT
Sbjct 182 IHKDL-------KDAPDSG-----RVLWDAIDADIDPT 207
>gi|262184430|ref|ZP_06043851.1| hypothetical protein CaurA7_10593 [Corynebacterium aurimucosum
ATCC 700975]
Length=219
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/219 (29%), Positives = 95/219 (44%), Gaps = 31/219 (14%)
Query 20 IAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLMLAAAVA 79
I +L+ A LW+++R+ WV D+ L+G+ WS L+ L++++LA VA
Sbjct 15 IGPVLMFAGAILLWLSSRMTWVTAAVEDDKAGSSVAELSGSLWSLELIALSVVVLAGGVA 74
Query 80 ALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGADLAHVPV------------ 127
A A+R R ++VL A A+ A G+ ++L A R +L
Sbjct 75 AFALRRAGRRIVSVLTALAAAAAGWRPVALLTAGAEAERAQELLQGGTNDTSVDSATISD 134
Query 128 -VTLVGSARHYWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRARRSIARR 186
T++ + G V A++ A AL AV + S+ G A+Y P A R
Sbjct 135 WATVLTADASTAGPVLAIVGAALALFGAVMVASNP---GGDKPRSAKYETP------AVR 185
Query 187 QHSNAAGRAAPQDDGPDMGPRMSERMIWEALDEGRDPTD 225
Q QD G R++W+ALD DPTD
Sbjct 186 QERLQEDLETSQDSG---------RVMWDALDADIDPTD 215
>gi|54023827|ref|YP_118069.1| hypothetical protein nfa18590 [Nocardia farcinica IFM 10152]
gi|54015335|dbj|BAD56705.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=240
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 73/206 (36%), Positives = 101/206 (50%), Gaps = 24/206 (11%)
Query 32 LWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLMLAAAVAALAVRGWPLRAL 91
+W A+RL WV + S D L P+ L GA+W AL PLAL++LAA A LA RGW R +
Sbjct 40 MWGASRLTWVRVTSADGLTEPRTDDLVGATWFGALTPLALVLLAAVAAVLATRGWLRRVV 99
Query 92 AVLLAAASFAVGYLGISLWVVPD-VAARGADLAHVP---VVTLVGSARHYWGAVAAVLAA 147
VL+A + +L A R LA +P VT V ++ + AV + AA
Sbjct 100 GVLVALVAAVTAVPAFALLTGSGATAERAGALAELPGRATVTEVQTS--IFPAVVTMTAA 157
Query 148 VCALLAAVFLMSSAAIRGSAGEDMARYAAP---RARRSIARRQHSNAAGRAAPQDDGPDM 204
+CA A + L + R SAG RY P RA + + N G A
Sbjct 158 LCAFAAGLLL--ARMPRESAGLS-GRYDNPGARRAAAAEEVAKQRNQEGGA--------- 205
Query 205 GPRMSERMIWEALDEGRDPTDREQES 230
+SER++W+ALD G DPT+ + +
Sbjct 206 ---LSERVLWDALDAGEDPTEDDHRT 228
>gi|19553289|ref|NP_601291.1| hypothetical protein NCgl2011 [Corynebacterium glutamicum ATCC
13032]
gi|62390927|ref|YP_226329.1| hypothetical protein cg2294 [Corynebacterium glutamicum ATCC
13032]
gi|21324862|dbj|BAB99485.1| Hypothetical membrane protein [Corynebacterium glutamicum ATCC
13032]
gi|41326266|emb|CAF20428.1| putative membrane protein [Corynebacterium glutamicum ATCC 13032]
Length=219
Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/224 (29%), Positives = 103/224 (46%), Gaps = 38/224 (16%)
Query 25 LVVAAGAL--WMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLM--------- 73
L + AGAL W+++R+ WV I +FD+ ++ GA+WST ++ LAL +
Sbjct 9 LGIGAGALVVWISSRMNWVTIEAFDDKSGSVTQSIVGATWSTEIMALALALLAAFAAALV 68
Query 74 -------LAAAVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGADLAHVP 126
+ ++AL G L LA+L ++ V A G L+
Sbjct 69 LKRMGRRIIGGISALIAVGASLSPLALLTQDPDAERARTLLTSGVASQKANSGTLLSD-- 126
Query 127 VVTLVGSARHYWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRARRSIARR 186
++ + H AV A++ AL+ V L A+R GED A+ +++ A +
Sbjct 127 WAEIINTTTHPLAAVVAMIGCALALVGGVVL----AMR--PGEDTAKSNQYERKQARAEK 180
Query 187 QHSNAAGRAAPQDDGPDMGPRMSERMIWEALDEGRDPTDREQES 230
H++ A QD PD G R++W+ALDE D T++ Q+S
Sbjct 181 IHTDLA-----QD--PDSG-----RVMWDALDEDIDFTEKTQKS 212
>gi|227503331|ref|ZP_03933380.1| conserved hypothetical protein [Corynebacterium accolens ATCC
49725]
gi|227075834|gb|EEI13797.1| conserved hypothetical protein [Corynebacterium accolens ATCC
49725]
Length=211
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/217 (29%), Positives = 91/217 (42%), Gaps = 31/217 (14%)
Query 23 LLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLMLAAAVAALA 82
LL+ V LW ++R WV S D+ + G+SWS L+ L L++LA +A LA
Sbjct 8 LLIAVGTAVLWFSSRSTWVKAVSEDDKSGSATNEIVGSSWSLELMALTLVLLAGVLAGLA 67
Query 83 VRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAAR------GADLAHVPV--------V 128
+R R +A++ A A+ A + I+L A R GA V
Sbjct 68 LRRTGRRIVAIVCALAAAAAAWSPINLLTSGADAQRAQKILQGASANENAVDSAAISEWA 127
Query 129 TLVGSARHYWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRARRSIARRQH 188
T++ G + A++ A A AV L + G+D A+ A + A RQ
Sbjct 128 TVISVEVTKLGPIVAIIGAALAFFGAVLLAQ------NPGKDKAK--ASSKYETPAARQE 179
Query 189 SNAAGRAAPQDDGPDMGPRMSERMIWEALDEGRDPTD 225
A D G R++W+ALD DPTD
Sbjct 180 KLAEDLETSSDSG---------RVMWDALDSDIDPTD 207
>gi|227833439|ref|YP_002835146.1| hypothetical protein cauri_1615 [Corynebacterium aurimucosum
ATCC 700975]
gi|227454455|gb|ACP33208.1| putative membrane protein [Corynebacterium aurimucosum ATCC 700975]
Length=202
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/216 (29%), Positives = 94/216 (44%), Gaps = 31/216 (14%)
Query 23 LLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLMLAAAVAALA 82
+L+ A LW+++R+ WV D+ L+G+ WS L+ L++++LA VAA A
Sbjct 1 MLMFAGAILLWLSSRMTWVTAAVEDDKAGSSVAELSGSLWSLELIALSVVVLAGGVAAFA 60
Query 83 VRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGADLAHVPV-------------VT 129
+R R ++VL A A+ A G+ ++L A R +L T
Sbjct 61 LRRAGRRIVSVLTALAAAAAGWRPVALLTAGAEAERAQELLQGGTNDTSVDSATISDWAT 120
Query 130 LVGSARHYWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRARRSIARRQHS 189
++ + G V A++ A AL AV + S+ G A+Y P A RQ
Sbjct 121 VLTADASTAGPVLAIVGAALALFGAVMVASNP---GGDKPRSAKYETP------AVRQER 171
Query 190 NAAGRAAPQDDGPDMGPRMSERMIWEALDEGRDPTD 225
QD G R++W+ALD DPTD
Sbjct 172 LQEDLETSQDSG---------RVMWDALDADIDPTD 198
>gi|227504742|ref|ZP_03934791.1| conserved hypothetical protein [Corynebacterium striatum ATCC
6940]
gi|227198592|gb|EEI78640.1| conserved hypothetical protein [Corynebacterium striatum ATCC
6940]
Length=210
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/224 (28%), Positives = 98/224 (44%), Gaps = 32/224 (14%)
Query 20 IAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLMLAAAVA 79
I LL+ V A LW+++R+ W + D+ V + G+ WS L+ L L++L AVA
Sbjct 5 IGPLLIAVGAILLWLSSRMTWAIASVEDDKSGFSIVDMIGSFWSLELIALTLVLLVGAVA 64
Query 80 ALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARGADL-------------AHVP 126
A+R R +A + A A+ AV + +SL AAR +L AH+
Sbjct 65 GAALRRTARRVVAAVCAVAAAAVAWNPVSLLTYGADAARAQELLRAGSSDENAVNGAHIS 124
Query 127 V-VTLVGSARHYWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRARRSIAR 185
++G+ G V A++ A AL AV L+ + +Y P AR+ +
Sbjct 125 DWAIVIGTEVSKVGPVIAIIGAAVALFGAVLLVRKPGVDKPRS---TKYETPAARQEMIA 181
Query 186 RQHSNAAGRAAPQDDGPDMGPRMSERMIWEALDEGRDPTDREQE 229
+ S R++W+ALD DPTD +++
Sbjct 182 EELETTTD---------------SGRVMWDALDNDIDPTDVKRD 210
>gi|344044762|gb|EGV40437.1| hypothetical protein CgS9114_07636 [Corynebacterium glutamicum
S9114]
Length=219
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/227 (29%), Positives = 104/227 (46%), Gaps = 44/227 (19%)
Query 25 LVVAAGAL--WMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLM--------- 73
L + AGAL W+++R+ WV I +FD+ ++ GA+WST ++ LAL +
Sbjct 9 LGIGAGALVVWISSRMNWVTIEAFDDKSGSVTQSIVGATWSTEIMALALALLAAFAAALV 68
Query 74 -------LAAAVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAARG---ADLA 123
+ ++AL G L LA+L ++ V A G +D A
Sbjct 69 LKRMGRRIIGGISALIAVGASLSPLALLTQDPDAERARTLLTSGVASQKANSGTLLSDWA 128
Query 124 HVPVVTLVGSARHYWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRARRSI 183
+ +T H AV A++ AL+ V L A+R GED A+ +++
Sbjct 129 EIINITT-----HPLAAVVAMIGCALALVGGVVL----AMR--PGEDTAKSNQYERKQAR 177
Query 184 ARRQHSNAAGRAAPQDDGPDMGPRMSERMIWEALDEGRDPTDREQES 230
A + H++ A QD PD G R++W+ALDE D T++ Q+S
Sbjct 178 AEKIHTDLA-----QD--PDSG-----RVMWDALDEDIDFTEKTQKS 212
>gi|38234131|ref|NP_939898.1| hypothetical protein DIP1556 [Corynebacterium diphtheriae NCTC
13129]
gi|38200393|emb|CAE50081.1| Putative membrane protein [Corynebacterium diphtheriae]
Length=191
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/203 (27%), Positives = 97/203 (48%), Gaps = 20/203 (9%)
Query 32 LWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLMLAAAVAALAVRGWPLRAL 91
+W ++R+PW+ + +FD+ K+V + GA+WST +AL+++AA A L +R R +
Sbjct 1 MWGSSRMPWLHVEAFDDKSGAKQVDMLGATWSTETTAVALVLIAACAAILVLRRAGRRFV 60
Query 92 AVLLAAASFAVGYLGISLWVVPDVAARGADLAHVPVVT---LVGSARHYWGAVAAVL--- 145
AV+ A A+ + + L A R ++ T G+A W + +
Sbjct 61 AVVSAVAAAGGLWAPVQLLFNEPDATRALNILTSHAATGHAKDGAALTGWAEITHISVQA 120
Query 146 -AAVCALLAAVFLMSSAAIRG-SAGEDMARYAAPRARRSIARRQHSNAAGRAAPQDDGPD 203
+ + A+ A F + +A I + G+D ++S RQ + + ++ PD
Sbjct 121 PSVILAMCGAGFALIAAIIATMNPGQD-------SVQKSRFERQQARNEKIESELEEAPD 173
Query 204 MGPRMSERMIWEALDEGRDPTDR 226
G R++W+A+D DPTDR
Sbjct 174 SG-----RVLWDAIDADIDPTDR 191
>gi|334697190|gb|AEG81987.1| putative membrane protein [Corynebacterium ulcerans 809]
Length=213
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/224 (26%), Positives = 95/224 (43%), Gaps = 34/224 (15%)
Query 15 RPMIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLML 74
+PM A L+ + A A+W A+R+PW+ + ++D+ K + ++G WST +AL++L
Sbjct 4 KPMQSSA--LIGLGALAVWGASRMPWLGVEAYDDKSGSKSLDVSGGMWSTETTAVALVLL 61
Query 75 AAAVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVV-PD-------VAARGADLAHVP 126
AA +A+ A+R R + ++ A+ + I L PD + + A
Sbjct 62 AACIASFALRRAGRRLVGIVAGLAAAGGAWSPIHLLTTDPDRERVLSLLTSESASGHQKD 121
Query 127 VVTLVGSAR------HYWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRAR 180
L G A H A A++ AL + L A G RY + R
Sbjct 122 GAALTGWAEITNLTTHTSAAALAIIGCALALFGGLVL---AMNPGKDSAKKNRYERKQER 178
Query 181 RSIARRQHSNAAGRAAPQDDGPDMGPRMSERMIWEALDEGRDPT 224
R+ +D PD G R++W+A+D DPT
Sbjct 179 SQKIRKD----------LEDAPDSG-----RVLWDAIDADIDPT 207
>gi|337291078|ref|YP_004630099.1| hypothetical protein CULC22_01470 [Corynebacterium ulcerans BR-AD22]
gi|334699384|gb|AEG84180.1| putative membrane protein [Corynebacterium ulcerans BR-AD22]
Length=213
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/224 (26%), Positives = 95/224 (43%), Gaps = 34/224 (15%)
Query 15 RPMIGIAQLLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLML 74
+PM A L+ + A A+W A+R+PW+ + ++D+ K + ++G WST +AL++L
Sbjct 4 KPMQSSA--LIGLGALAVWGASRMPWLGVEAYDDKSGSKSLDVSGGMWSTETTAVALVLL 61
Query 75 AAAVAALAVRGWPLRALAVLLAAASFAVGYLGISLWVV-PD-------VAARGADLAHVP 126
AA +A+ A+R R + ++ A+ + I L PD + + A
Sbjct 62 AACIASFALRRVGRRLVGIVAGLAAAGGAWSPIHLLTTDPDRERVLSLLTSESASGHQKD 121
Query 127 VVTLVGSAR------HYWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRAR 180
L G A H A A++ AL + L A G RY + R
Sbjct 122 GAALTGWAEITNLTTHTSAAALAIIGCALALFGGLVL---AMNPGKDSAKKNRYERKQER 178
Query 181 RSIARRQHSNAAGRAAPQDDGPDMGPRMSERMIWEALDEGRDPT 224
R+ +D PD G R++W+A+D DPT
Sbjct 179 SQKIRKD----------LEDAPDSG-----RVLWDAIDADIDPT 207
>gi|306836430|ref|ZP_07469406.1| conserved hypothetical protein [Corynebacterium accolens ATCC
49726]
gi|304567681|gb|EFM43270.1| conserved hypothetical protein [Corynebacterium accolens ATCC
49726]
Length=211
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/217 (28%), Positives = 90/217 (42%), Gaps = 31/217 (14%)
Query 23 LLLVVAAGALWMAARLPWVVIGSFDELGPPKEVTLTGASWSTALLPLALLMLAAAVAALA 82
LL+ V LW ++R WV S D+ + G++WS L+ L L++LA +A +A
Sbjct 8 LLIAVGTAVLWFSSRSTWVKAVSEDDKSGSATNEIVGSAWSLELMALTLVLLAGVLAGIA 67
Query 83 VRGWPLRALAVLLAAASFAVGYLGISLWVVPDVAAR------GADLAHVPV--------V 128
+R R +A++ A A+ + ISL A R GA V
Sbjct 68 LRRTGRRIVAIVCALAAAGAAWSPISLLTSGADAQRAQKILQGASANENAVDSAAISEWA 127
Query 129 TLVGSARHYWGAVAAVLAAVCALLAAVFLMSSAAIRGSAGEDMARYAAPRARRSIARRQH 188
T++ G + A++ A A AV L + G+D A+ A + A RQ
Sbjct 128 TVISVEVTKLGPIVAIIGAALAFFGAVLLAQ------NPGKDKAK--ASSKYETPAARQE 179
Query 189 SNAAGRAAPQDDGPDMGPRMSERMIWEALDEGRDPTD 225
A D G R++W+ALD DPTD
Sbjct 180 KLAEDLETSSDSG---------RVMWDALDSDIDPTD 207
Lambda K H
0.321 0.132 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 316387145800
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40