BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1616 Length=132 Score E Sequences producing significant alignments: (Bits) Value gi|15608754|ref|NP_216132.1| hypothetical protein Rv1616 [Mycoba... 261 2e-68 gi|308370773|ref|ZP_07667014.1| conserved membrane protein [Myco... 228 3e-58 gi|296164482|ref|ZP_06847054.1| conserved hypothetical protein [... 183 9e-45 gi|15827658|ref|NP_301921.1| hypothetical protein ML1276 [Mycoba... 182 2e-44 gi|240167992|ref|ZP_04746651.1| hypothetical protein MkanA1_0166... 174 3e-42 gi|183982432|ref|YP_001850723.1| hypothetical protein MMAR_2418 ... 171 2e-41 gi|118617240|ref|YP_905572.1| hypothetical protein MUL_1596 [Myc... 171 5e-41 gi|41407407|ref|NP_960243.1| hypothetical protein MAP1309 [Mycob... 162 1e-38 gi|108800011|ref|YP_640208.1| hypothetical protein Mmcs_3045 [My... 162 1e-38 gi|126435640|ref|YP_001071331.1| hypothetical protein Mjls_3061 ... 162 2e-38 gi|342860814|ref|ZP_08717464.1| hypothetical protein MCOL_18123 ... 161 3e-38 gi|254775618|ref|ZP_05217134.1| hypothetical protein MaviaA2_132... 146 9e-34 gi|336457895|gb|EGO36888.1| Protein of unknown function (DUF2752... 145 1e-33 gi|120403805|ref|YP_953634.1| hypothetical protein Mvan_2821 [My... 141 4e-32 gi|118463752|ref|YP_882354.1| hypothetical protein MAV_3171 [Myc... 140 8e-32 gi|118472382|ref|YP_887538.1| hypothetical protein MSMEG_3224 [M... 137 4e-31 gi|145224178|ref|YP_001134856.1| hypothetical protein Mflv_3594 ... 137 7e-31 gi|254820965|ref|ZP_05225966.1| hypothetical protein MintA_13605... 135 2e-30 gi|288922301|ref|ZP_06416496.1| hypothetical protein FrEUN1fDRAF... 109 1e-22 gi|336176482|ref|YP_004581857.1| hypothetical protein FsymDg_037... 103 8e-21 gi|158316668|ref|YP_001509176.1| hypothetical protein Franean1_4... 100 5e-20 gi|111223198|ref|YP_713992.1| hypothetical protein FRAAL3788 [Fr... 86.7 1e-15 gi|311896261|dbj|BAJ28669.1| hypothetical protein KSE_28580 [Kit... 75.9 2e-12 gi|295839474|ref|ZP_06826407.1| membrane protein [Streptomyces s... 75.5 2e-12 gi|116878390|ref|YP_355801.2| hypothetical protein Pcar_0371 [Pe... 72.8 2e-11 gi|297201906|ref|ZP_06919303.1| conserved hypothetical protein [... 72.4 2e-11 gi|318061970|ref|ZP_07980691.1| hypothetical protein SSA3_28810 ... 72.4 2e-11 gi|302518472|ref|ZP_07270814.1| conserved hypothetical protein [... 71.6 3e-11 gi|86739560|ref|YP_479960.1| hypothetical protein Francci3_0847 ... 71.6 3e-11 gi|333027848|ref|ZP_08455912.1| hypothetical protein STTU_5352 [... 71.6 3e-11 gi|46310127|gb|AAS87345.1| hypothetical protein [uncultured gamm... 71.6 4e-11 gi|171909573|ref|ZP_02925043.1| hypothetical protein VspiD_00335... 70.9 6e-11 gi|229820709|ref|YP_002882235.1| hypothetical protein Bcav_2222 ... 69.7 1e-10 gi|312199663|ref|YP_004019724.1| hypothetical protein FraEuI1c_5... 68.2 4e-10 gi|29832716|ref|NP_827350.1| hypothetical protein SAV_6174 [Stre... 67.8 5e-10 gi|337765171|emb|CCB73880.1| conserved membrane protein of unkno... 67.8 5e-10 gi|296269428|ref|YP_003652060.1| hypothetical protein Tbis_1449 ... 67.4 7e-10 gi|320011339|gb|ADW06189.1| hypothetical protein Sfla_4788 [Stre... 67.0 9e-10 gi|256379438|ref|YP_003103098.1| hypothetical protein Amir_5433 ... 67.0 1e-09 gi|302546212|ref|ZP_07298554.1| putative membrane protein [Strep... 65.5 3e-09 gi|297199016|ref|ZP_06916413.1| conserved hypothetical protein [... 65.1 3e-09 gi|29829943|ref|NP_824577.1| hypothetical protein SAV_3400 [Stre... 63.9 7e-09 gi|111220929|ref|YP_711723.1| hypothetical protein FRAAL1476 [Fr... 63.9 7e-09 gi|120405668|ref|YP_955497.1| hypothetical protein Mvan_4717 [My... 63.2 1e-08 gi|329938076|ref|ZP_08287527.1| hypothetical protein SGM_3019 [S... 62.8 2e-08 gi|291443948|ref|ZP_06583338.1| conserved hypothetical protein [... 62.0 3e-08 gi|197301623|ref|ZP_03166696.1| hypothetical protein RUMLAC_0035... 62.0 3e-08 gi|302561172|ref|ZP_07313514.1| membrane protein [Streptomyces g... 62.0 3e-08 gi|239987000|ref|ZP_04707664.1| hypothetical protein SrosN1_0681... 61.6 4e-08 gi|296137879|ref|YP_003645122.1| hypothetical protein Tpau_0129 ... 61.2 4e-08 >gi|15608754|ref|NP_216132.1| hypothetical protein Rv1616 [Mycobacterium tuberculosis H37Rv] gi|15841071|ref|NP_336108.1| hypothetical protein MT1652 [Mycobacterium tuberculosis CDC1551] gi|31792802|ref|NP_855295.1| hypothetical protein Mb1642 [Mycobacterium bovis AF2122/97] 63 more sequence titles Length=132 Score = 261 bits (668), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 132/132 (100%), Positives = 132/132 (100%), Gaps = 0/132 (0%) Query 1 MEASGRQRRYAAAGSVVLLAGALGYIGLVDPHNSNSLYPPCLFKLLTGWNCPACGGLRMI 60 MEASGRQRRYAAAGSVVLLAGALGYIGLVDPHNSNSLYPPCLFKLLTGWNCPACGGLRMI Sbjct 1 MEASGRQRRYAAAGSVVLLAGALGYIGLVDPHNSNSLYPPCLFKLLTGWNCPACGGLRMI 60 Query 61 HDLLHGELAASINDNVFLLVGVPVLASWVLLRRRHGDLALPIPVMIAVAVAVIAWTVLRN 120 HDLLHGELAASINDNVFLLVGVPVLASWVLLRRRHGDLALPIPVMIAVAVAVIAWTVLRN Sbjct 61 HDLLHGELAASINDNVFLLVGVPVLASWVLLRRRHGDLALPIPVMIAVAVAVIAWTVLRN 120 Query 121 LPGFPLVPTISG 132 LPGFPLVPTISG Sbjct 121 LPGFPLVPTISG 132 >gi|308370773|ref|ZP_07667014.1| conserved membrane protein [Mycobacterium tuberculosis SUMu003] gi|308372011|ref|ZP_07667283.1| conserved membrane protein [Mycobacterium tuberculosis SUMu004] gi|308374356|ref|ZP_07667766.1| conserved membrane protein [Mycobacterium tuberculosis SUMu006] 13 more sequence titles Length=116 Score = 228 bits (580), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 115/116 (99%), Positives = 116/116 (100%), Gaps = 0/116 (0%) Query 17 VLLAGALGYIGLVDPHNSNSLYPPCLFKLLTGWNCPACGGLRMIHDLLHGELAASINDNV 76 +LLAGALGYIGLVDPHNSNSLYPPCLFKLLTGWNCPACGGLRMIHDLLHGELAASINDNV Sbjct 1 MLLAGALGYIGLVDPHNSNSLYPPCLFKLLTGWNCPACGGLRMIHDLLHGELAASINDNV 60 Query 77 FLLVGVPVLASWVLLRRRHGDLALPIPVMIAVAVAVIAWTVLRNLPGFPLVPTISG 132 FLLVGVPVLASWVLLRRRHGDLALPIPVMIAVAVAVIAWTVLRNLPGFPLVPTISG Sbjct 61 FLLVGVPVLASWVLLRRRHGDLALPIPVMIAVAVAVIAWTVLRNLPGFPLVPTISG 116 >gi|296164482|ref|ZP_06847054.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295900180|gb|EFG79614.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=143 Score = 183 bits (464), Expect = 9e-45, Method: Compositional matrix adjust. Identities = 86/132 (66%), Positives = 102/132 (78%), Gaps = 0/132 (0%) Query 1 MEASGRQRRYAAAGSVVLLAGALGYIGLVDPHNSNSLYPPCLFKLLTGWNCPACGGLRMI 60 ME +R Y AAG+ +L GAL Y+GLVDPHN+NS+YP C FK LTGWNCP CGGLRM Sbjct 11 METGHGRRWYTAAGTAAVLGGALAYVGLVDPHNTNSVYPQCPFKWLTGWNCPFCGGLRMT 70 Query 61 HDLLHGELAASINDNVFLLVGVPVLASWVLLRRRHGDLALPIPVMIAVAVAVIAWTVLRN 120 HDLLHG LAA++NDNVFLLVG+P+LA W+L+ R G+ AL P + + +AVIAWTVLRN Sbjct 71 HDLLHGHLAAAVNDNVFLLVGIPMLAGWLLINRGRGEAALSTPAWLTMVLAVIAWTVLRN 130 Query 121 LPGFPLVPTISG 132 LPGFPL P I G Sbjct 131 LPGFPLSPAIQG 142 >gi|15827658|ref|NP_301921.1| hypothetical protein ML1276 [Mycobacterium leprae TN] gi|221230135|ref|YP_002503551.1| hypothetical protein MLBr_01276 [Mycobacterium leprae Br4923] gi|13093209|emb|CAC31657.1| conserved membrane protein [Mycobacterium leprae] gi|219933242|emb|CAR71371.1| conserved membrane protein [Mycobacterium leprae Br4923] Length=146 Score = 182 bits (461), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 85/129 (66%), Positives = 103/129 (80%), Gaps = 0/129 (0%) Query 2 EASGRQRRYAAAGSVVLLAGALGYIGLVDPHNSNSLYPPCLFKLLTGWNCPACGGLRMIH 61 + +R Y AGS +LLAGA GYIG VDPHN++ +YP CLFKLLTGWNCP CGGLR++H Sbjct 15 QQDPHRRLYGVAGSGLLLAGAFGYIGFVDPHNADLVYPLCLFKLLTGWNCPFCGGLRLMH 74 Query 62 DLLHGELAASINDNVFLLVGVPVLASWVLLRRRHGDLALPIPVMIAVAVAVIAWTVLRNL 121 DLLHG+LAAS++DNVFLLVG+PVL WV+LRRR G LP ++ + VA I WTVLRN+ Sbjct 75 DLLHGDLAASVSDNVFLLVGIPVLVGWVVLRRRLGQSVLPTVALLTITVASIVWTVLRNV 134 Query 122 PGFPLVPTI 130 PGFPLVPT+ Sbjct 135 PGFPLVPTV 143 >gi|240167992|ref|ZP_04746651.1| hypothetical protein MkanA1_01660 [Mycobacterium kansasii ATCC 12478] Length=120 Score = 174 bits (442), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 85/119 (72%), Positives = 101/119 (85%), Gaps = 3/119 (2%) Query 17 VLLAGALGYIGLVDPHNSNSLYPPCLFKLLTGWNCPACGGLRMIHDLLHGELAASINDNV 76 +LLAGALGY+G+VDPH S+SLYP C FKLLTGWNCPACGGLRM HDLLHG++AA+INDNV Sbjct 1 MLLAGALGYVGVVDPHRSHSLYPQCPFKLLTGWNCPACGGLRMTHDLLHGDVAAAINDNV 60 Query 77 F---LLVGVPVLASWVLLRRRHGDLALPIPVMIAVAVAVIAWTVLRNLPGFPLVPTISG 132 F LL G+P++A W+LLRRR+G LP P +I +AVA + WTVLRNLPGFPLVPT+ G Sbjct 61 FVVLLLAGIPMIAGWMLLRRRNGQSWLPAPAIITLAVATVVWTVLRNLPGFPLVPTVLG 119 >gi|183982432|ref|YP_001850723.1| hypothetical protein MMAR_2418 [Mycobacterium marinum M] gi|183175758|gb|ACC40868.1| conserved hypothetical membrane protein [Mycobacterium marinum M] Length=147 Score = 171 bits (434), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 91/129 (71%), Positives = 102/129 (80%), Gaps = 0/129 (0%) Query 4 SGRQRRYAAAGSVVLLAGALGYIGLVDPHNSNSLYPPCLFKLLTGWNCPACGGLRMIHDL 63 S R RY A S LLA ALGYIGLVDPH +NS YP C FK LTGW+CPACGGLRM+HDL Sbjct 18 SQRPGRYGAVASAGLLAAALGYIGLVDPHGANSAYPACPFKWLTGWDCPACGGLRMVHDL 77 Query 64 LHGELAASINDNVFLLVGVPVLASWVLLRRRHGDLALPIPVMIAVAVAVIAWTVLRNLPG 123 LHG+L ASINDN+FLLVG+PVL +W LLRRR G +LP+ MI V VA+I WTVLRNLPG Sbjct 78 LHGDLVASINDNIFLLVGIPVLGAWALLRRRRGRTSLPLAAMIVVGVAMIVWTVLRNLPG 137 Query 124 FPLVPTISG 132 FPLVP + G Sbjct 138 FPLVPAVYG 146 >gi|118617240|ref|YP_905572.1| hypothetical protein MUL_1596 [Mycobacterium ulcerans Agy99] gi|118569350|gb|ABL04101.1| conserved hypothetical membrane protein [Mycobacterium ulcerans Agy99] Length=147 Score = 171 bits (432), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 80/109 (74%), Positives = 91/109 (84%), Gaps = 0/109 (0%) Query 24 GYIGLVDPHNSNSLYPPCLFKLLTGWNCPACGGLRMIHDLLHGELAASINDNVFLLVGVP 83 GYIGLVDPH +NS YP C FK LTGW+CPACGGLRM+HDLLHG+L ASINDN+FLLVG+P Sbjct 38 GYIGLVDPHGANSAYPACPFKWLTGWDCPACGGLRMVHDLLHGDLVASINDNIFLLVGIP 97 Query 84 VLASWVLLRRRHGDLALPIPVMIAVAVAVIAWTVLRNLPGFPLVPTISG 132 VL +W LLRRR G +LP+ MI V VA+I WTVLRNLPGFPLVP + G Sbjct 98 VLGAWALLRRRRGRTSLPLAAMIVVGVAMIVWTVLRNLPGFPLVPAVYG 146 >gi|41407407|ref|NP_960243.1| hypothetical protein MAP1309 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395759|gb|AAS03626.1| hypothetical protein MAP_1309 [Mycobacterium avium subsp. paratuberculosis K-10] Length=139 Score = 162 bits (411), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 83/128 (65%), Positives = 100/128 (79%), Gaps = 0/128 (0%) Query 5 GRQRRYAAAGSVVLLAGALGYIGLVDPHNSNSLYPPCLFKLLTGWNCPACGGLRMIHDLL 64 GR RR+ AAG+ V+L+GALGYIGL DPH+ S+YPPC FK LTGWNCP CGGLRM HDLL Sbjct 11 GRHRRHVAAGTAVVLSGALGYIGLADPHDPASIYPPCPFKWLTGWNCPFCGGLRMTHDLL 70 Query 65 HGELAASINDNVFLLVGVPVLASWVLLRRRHGDLALPIPVMIAVAVAVIAWTVLRNLPGF 124 HGEL A+++DNVFLL VP LA+++L+RR G +LP + AV VA + WTVLRNLP F Sbjct 71 HGELWAAVHDNVFLLAAVPTLAAFLLVRRARGRRSLPAAAVPAVVVATLVWTVLRNLPAF 130 Query 125 PLVPTISG 132 PL PT+ G Sbjct 131 PLFPTVLG 138 >gi|108800011|ref|YP_640208.1| hypothetical protein Mmcs_3045 [Mycobacterium sp. MCS] gi|119869136|ref|YP_939088.1| hypothetical protein Mkms_3104 [Mycobacterium sp. KMS] gi|108770430|gb|ABG09152.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119695225|gb|ABL92298.1| conserved hypothetical protein [Mycobacterium sp. KMS] Length=137 Score = 162 bits (410), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 79/128 (62%), Positives = 92/128 (72%), Gaps = 0/128 (0%) Query 3 ASGRQRRYAAAGSVVLLAGALGYIGLVDPHNSNSLYPPCLFKLLTGWNCPACGGLRMIHD 62 A R Y G+ L AGAL YIG+ DPH L P C FK LTGW CPACGGLRM HD Sbjct 7 APSRTPVYLTLGAGALFAGALTYIGVADPHRPGFLAPLCPFKALTGWACPACGGLRMTHD 66 Query 63 LLHGELAASINDNVFLLVGVPVLASWVLLRRRHGDLALPIPVMIAVAVAVIAWTVLRNLP 122 LLHG+LAA++ DNVFLLVG+P+LA WV RRRH LP+ ++ +AVA I WTV+RNLP Sbjct 67 LLHGDLAAAVADNVFLLVGIPLLALWVFFRRRHHQAVLPVTAIVVIAVATITWTVVRNLP 126 Query 123 GFPLVPTI 130 GFPLVPT+ Sbjct 127 GFPLVPTL 134 >gi|126435640|ref|YP_001071331.1| hypothetical protein Mjls_3061 [Mycobacterium sp. JLS] gi|126235440|gb|ABN98840.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=137 Score = 162 bits (409), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 79/128 (62%), Positives = 92/128 (72%), Gaps = 0/128 (0%) Query 3 ASGRQRRYAAAGSVVLLAGALGYIGLVDPHNSNSLYPPCLFKLLTGWNCPACGGLRMIHD 62 A R Y G+ L AGAL YIG+ DPH L P C FK LTGW CPACGGLRM HD Sbjct 7 APSRTPVYLTLGAGALFAGALTYIGVADPHRPGLLAPLCPFKALTGWACPACGGLRMTHD 66 Query 63 LLHGELAASINDNVFLLVGVPVLASWVLLRRRHGDLALPIPVMIAVAVAVIAWTVLRNLP 122 LLHG+LAA++ DNVFLLVG+P+LA WV RRRH LP+ ++ +AVA I WTV+RNLP Sbjct 67 LLHGDLAAAVADNVFLLVGIPLLALWVFFRRRHHQAVLPVTAIVVIAVATITWTVVRNLP 126 Query 123 GFPLVPTI 130 GFPLVPT+ Sbjct 127 GFPLVPTL 134 >gi|342860814|ref|ZP_08717464.1| hypothetical protein MCOL_18123 [Mycobacterium colombiense CECT 3035] gi|342131838|gb|EGT85095.1| hypothetical protein MCOL_18123 [Mycobacterium colombiense CECT 3035] Length=144 Score = 161 bits (407), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 79/127 (63%), Positives = 93/127 (74%), Gaps = 0/127 (0%) Query 6 RQRRYAAAGSVVLLAGALGYIGLVDPHNSNSLYPPCLFKLLTGWNCPACGGLRMIHDLLH 65 R R AAG+ V L GALGY+ L DPH +S+YP C FK LTGWNCP CGGLRM HDLLH Sbjct 17 RHRLSIAAGTGVALGGALGYVALADPHRPSSIYPACPFKWLTGWNCPFCGGLRMTHDLLH 76 Query 66 GELAASINDNVFLLVGVPVLASWVLLRRRHGDLALPIPVMIAVAVAVIAWTVLRNLPGFP 125 G+L A I+DNVF+LVG+P+LA+WVL+RR G P ++ VA IAWTVLRNLP FP Sbjct 77 GDLMAGIHDNVFVLVGIPLLAAWVLVRRARGKGVAPRAALLTALVATIAWTVLRNLPAFP 136 Query 126 LVPTISG 132 L PT+ G Sbjct 137 LFPTVLG 143 >gi|254775618|ref|ZP_05217134.1| hypothetical protein MaviaA2_13248 [Mycobacterium avium subsp. avium ATCC 25291] Length=119 Score = 146 bits (369), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 76/116 (66%), Positives = 90/116 (78%), Gaps = 0/116 (0%) Query 17 VLLAGALGYIGLVDPHNSNSLYPPCLFKLLTGWNCPACGGLRMIHDLLHGELAASINDNV 76 V L+GALGYIGL DPH+ S+YPPC FK LTGWNCP CGGLRM HDLLHGEL A+++DNV Sbjct 3 VALSGALGYIGLADPHDPASIYPPCPFKWLTGWNCPFCGGLRMTHDLLHGELWAAVHDNV 62 Query 77 FLLVGVPVLASWVLLRRRHGDLALPIPVMIAVAVAVIAWTVLRNLPGFPLVPTISG 132 FLL VP LA+++L+RR G +LP + AV VA + WTVLRNLP FPL PT+ G Sbjct 63 FLLAAVPTLAAFLLVRRARGRRSLPAAAVPAVVVATLVWTVLRNLPAFPLFPTVLG 118 >gi|336457895|gb|EGO36888.1| Protein of unknown function (DUF2752) [Mycobacterium avium subsp. paratuberculosis S397] Length=117 Score = 145 bits (367), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 75/116 (65%), Positives = 91/116 (79%), Gaps = 0/116 (0%) Query 17 VLLAGALGYIGLVDPHNSNSLYPPCLFKLLTGWNCPACGGLRMIHDLLHGELAASINDNV 76 ++L+GALGYIGL DPH+ S+YPPC FK LTGWNCP CGGLRM HDLLHGEL A+++DNV Sbjct 1 MVLSGALGYIGLADPHDPASIYPPCPFKWLTGWNCPFCGGLRMTHDLLHGELWAAVHDNV 60 Query 77 FLLVGVPVLASWVLLRRRHGDLALPIPVMIAVAVAVIAWTVLRNLPGFPLVPTISG 132 FLL VP LA+++L+RR G +LP + AV VA + WTVLRNLP FPL PT+ G Sbjct 61 FLLAAVPTLAAFLLVRRARGRRSLPAAAVPAVVVATLVWTVLRNLPAFPLFPTVLG 116 >gi|120403805|ref|YP_953634.1| hypothetical protein Mvan_2821 [Mycobacterium vanbaalenii PYR-1] gi|119956623|gb|ABM13628.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=137 Score = 141 bits (355), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 66/110 (60%), Positives = 83/110 (76%), Gaps = 0/110 (0%) Query 21 GALGYIGLVDPHNSNSLYPPCLFKLLTGWNCPACGGLRMIHDLLHGELAASINDNVFLLV 80 GAL YIG+ +PH+ + ++P C F LTGW CPACGGLRM HDLLHG+LAA+ DN F+L Sbjct 25 GALAYIGIGNPHSPSFVFPSCPFNALTGWLCPACGGLRMTHDLLHGDLAAAFVDNPFVLF 84 Query 81 GVPVLASWVLLRRRHGDLALPIPVMIAVAVAVIAWTVLRNLPGFPLVPTI 130 G+P+L W+L+RRR G A P + + AV+AWTV+RNLPGFPLVPTI Sbjct 85 GLPLLMGWLLIRRRQGRPAFTAPAYVVMITAVLAWTVVRNLPGFPLVPTI 134 >gi|118463752|ref|YP_882354.1| hypothetical protein MAV_3171 [Mycobacterium avium 104] gi|118165039|gb|ABK65936.1| conserved hypothetical protein [Mycobacterium avium 104] Length=117 Score = 140 bits (352), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 75/114 (66%), Positives = 89/114 (79%), Gaps = 0/114 (0%) Query 19 LAGALGYIGLVDPHNSNSLYPPCLFKLLTGWNCPACGGLRMIHDLLHGELAASINDNVFL 78 L+GALGYIGL DPH+ S+YPPC FK LTGWNCP CGGLRM HDLLHG+L A+++DNVFL Sbjct 3 LSGALGYIGLADPHDPASIYPPCPFKWLTGWNCPFCGGLRMTHDLLHGDLWAAVHDNVFL 62 Query 79 LVGVPVLASWVLLRRRHGDLALPIPVMIAVAVAVIAWTVLRNLPGFPLVPTISG 132 L VP LA+++L+RR G ALP + AV VA + WTVLRNLP FPL PT+ G Sbjct 63 LAAVPTLAAFLLVRRARGRRALPAAAVPAVVVATLVWTVLRNLPAFPLFPTVLG 116 >gi|118472382|ref|YP_887538.1| hypothetical protein MSMEG_3224 [Mycobacterium smegmatis str. MC2 155] gi|118173669|gb|ABK74565.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=137 Score = 137 bits (346), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 61/106 (58%), Positives = 78/106 (74%), Gaps = 0/106 (0%) Query 25 YIGLVDPHNSNSLYPPCLFKLLTGWNCPACGGLRMIHDLLHGELAASINDNVFLLVGVPV 84 Y+G DPH L+PPC FK+LTGW+CP CGGLRM HDLLHG++AA++ DNVF LV +PV Sbjct 29 YLGFADPHRPGFLFPPCPFKMLTGWDCPGCGGLRMTHDLLHGDVAAAVVDNVFALVALPV 88 Query 85 LASWVLLRRRHGDLALPIPVMIAVAVAVIAWTVLRNLPGFPLVPTI 130 L +W ++RRR G + V+ + V+ WTV RNLPGFPLVPT+ Sbjct 89 LLAWAIVRRRSGKPVFTVAVVAVILVSAAVWTVTRNLPGFPLVPTM 134 >gi|145224178|ref|YP_001134856.1| hypothetical protein Mflv_3594 [Mycobacterium gilvum PYR-GCK] gi|315444513|ref|YP_004077392.1| hypothetical protein Mspyr1_29380 [Mycobacterium sp. Spyr1] gi|145216664|gb|ABP46068.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK] gi|315262816|gb|ADT99557.1| hypothetical protein Mspyr1_29380 [Mycobacterium sp. Spyr1] Length=136 Score = 137 bits (344), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 67/120 (56%), Positives = 85/120 (71%), Gaps = 3/120 (2%) Query 11 AAAGSVVLLAGALGYIGLVDPHNSNSLYPPCLFKLLTGWNCPACGGLRMIHDLLHGELAA 70 +AAG+V + GAL YIGL DPH +PPC F +TGW CP CGGLRM HDLLHG++AA Sbjct 17 SAAGTVGI--GALAYIGLGDPHRPG-FFPPCPFLEMTGWLCPGCGGLRMTHDLLHGDIAA 73 Query 71 SINDNVFLLVGVPVLASWVLLRRRHGDLALPIPVMIAVAVAVIAWTVLRNLPGFPLVPTI 130 + DN F+L+GVP+L W L+RRR + + + AVIAWT++RNLPGFPLVPT+ Sbjct 74 AFVDNAFILIGVPLLIVWALIRRRQSRRVFTVSALAVIFAAVIAWTIVRNLPGFPLVPTL 133 >gi|254820965|ref|ZP_05225966.1| hypothetical protein MintA_13605 [Mycobacterium intracellulare ATCC 13950] Length=147 Score = 135 bits (340), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 69/123 (57%), Positives = 93/123 (76%), Gaps = 0/123 (0%) Query 10 YAAAGSVVLLAGALGYIGLVDPHNSNSLYPPCLFKLLTGWNCPACGGLRMIHDLLHGELA 69 Y A + + L GALGY+ L DPHN S+YPPC F+ LTGWNCP CGGLRM +D++HG+LA Sbjct 24 YVGAATGLALGGALGYVALADPHNPASIYPPCPFRWLTGWNCPFCGGLRMTYDVVHGDLA 83 Query 70 ASINDNVFLLVGVPVLASWVLLRRRHGDLALPIPVMIAVAVAVIAWTVLRNLPGFPLVPT 129 A+++DNVF+LV +P+LA+W+++RR G L P ++ V VA + WTV RNLP FPL+PT Sbjct 84 AALHDNVFVLVAIPMLAAWLVVRRARGASPLSRPALLTVVVATVVWTVARNLPAFPLIPT 143 Query 130 ISG 132 + G Sbjct 144 VLG 146 >gi|288922301|ref|ZP_06416496.1| hypothetical protein FrEUN1fDRAFT_6194 [Frankia sp. EUN1f] gi|288346366|gb|EFC80700.1| hypothetical protein FrEUN1fDRAFT_6194 [Frankia sp. EUN1f] Length=155 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 60/117 (52%), Positives = 79/117 (68%), Gaps = 5/117 (4%) Query 18 LLAGALGYIGLVDPHNSNSLYPPCLFKLLTGWNCPACGGLRMIHDLLHGELAASINDNVF 77 L+AGA GY+ VDPH+ ++ P C K LTG +CPACGGLR+ HDLLHG AA+ +DN+F Sbjct 39 LVAGA-GYLAAVDPHDPAAVMPTCPTKALTGLDCPACGGLRLAHDLLHGMPAAAAHDNLF 97 Query 78 LLVGVPVLASWVLLRRRHGDLA----LPIPVMIAVAVAVIAWTVLRNLPGFPLVPTI 130 LLV P+L + V+ + R + LP PV +A A +AW V+RNLPG+PL PT Sbjct 98 LLVCAPLLVALVVRQARAYERGVRAPLPRPVAHGIAGAALAWMVVRNLPGWPLTPTT 154 >gi|336176482|ref|YP_004581857.1| hypothetical protein FsymDg_0374 [Frankia symbiont of Datisca glomerata] gi|334857462|gb|AEH07936.1| hypothetical protein FsymDg_0374 [Frankia symbiont of Datisca glomerata] Length=174 Score = 103 bits (257), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 58/128 (46%), Positives = 81/128 (64%), Gaps = 6/128 (4%) Query 5 GRQRRYAAAGSVVLLAGALGYIGLVDPHNSNSLYPPCLFKLLTGWNCPACGGLRMIHDLL 64 G RR SV +L +GY+ + DPH+ + L P C KL+TG++CPACGGLR++HDLL Sbjct 46 GGWRRLILGASVCVLG--VGYLAVADPHDPDVLMPICPTKLVTGFDCPACGGLRLVHDLL 103 Query 65 HGELAASINDNVFLLVGVPVLAS--WVLLRR--RHGDLALPIPVMIAVAVAVIAWTVLRN 120 HG+L A+ +DN+F+L+ PVL W R R +P + +A A + WTV+RN Sbjct 104 HGQLRAAAHDNLFMLLCSPVLVYLIWRQARAIGRGEHTRVPGSLAYGLAGAALVWTVVRN 163 Query 121 LPGFPLVP 128 LPG+PL P Sbjct 164 LPGWPLTP 171 >gi|158316668|ref|YP_001509176.1| hypothetical protein Franean1_4905 [Frankia sp. EAN1pec] gi|158112073|gb|ABW14270.1| conserved hypothetical protein [Frankia sp. EAN1pec] Length=140 Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 59/131 (46%), Positives = 82/131 (63%), Gaps = 4/131 (3%) Query 3 ASGRQRRYAAAGSVVLLAGALGYIGLVDPHNSNSLYPPCLFKLLTGWNCPACGGLRMIHD 62 AS +RR AG+ L +GY+ DPH+ +S+ P C + +TG +CPACGGLR+ +D Sbjct 8 ASRVRRRLVLAGAGCCLLAGVGYLAGTDPHDPSSVMPRCPVRAVTGLDCPACGGLRLTYD 67 Query 63 LLHGELAASINDNVFLLVGVPVLASWVLLRRRHGDLA----LPIPVMIAVAVAVIAWTVL 118 LLHG AA+ DN+FLLV P+L + V+ + R D LP P+ +A A +AW + Sbjct 68 LLHGMPAAAARDNLFLLVCSPLLVALVVRQARAFDRGHPAPLPRPLAYGLAGAALAWMAV 127 Query 119 RNLPGFPLVPT 129 RNLPG+PL PT Sbjct 128 RNLPGWPLSPT 138 >gi|111223198|ref|YP_713992.1| hypothetical protein FRAAL3788 [Frankia alni ACN14a] gi|111150730|emb|CAJ62431.1| conserved hypothetical protein; putative membrane protein [Frankia alni ACN14a] Length=159 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 52/130 (40%), Positives = 73/130 (57%), Gaps = 4/130 (3%) Query 7 QRRYAAAGSVVLLAGALGYIGLVDPHNSNSLYPPCLFKLLTGWNCPACGGLRMIHDLLHG 66 +RR A G V L Y+ DPH+ +++ P C TG +CPACG LR +D+LHG Sbjct 30 RRRAAVWGVVAAAVAGLTYLAGHDPHDPSTVMPGCPIHRATGLDCPACGTLRATYDVLHG 89 Query 67 ELAASINDNVFLLVGVPVLASWVLLRRR--HGDLALPIPVMIAVAV--AVIAWTVLRNLP 122 AA+ +DNVF+L P+LA + + R D P+P +A + A + W V+RNLP Sbjct 90 RWAAAGHDNVFVLACAPLLAGLLARQARAVRDDRYAPLPAPLAYGLGGAALVWMVVRNLP 149 Query 123 GFPLVPTISG 132 G+PL P G Sbjct 150 GWPLTPGSHG 159 >gi|311896261|dbj|BAJ28669.1| hypothetical protein KSE_28580 [Kitasatospora setae KM-6054] Length=152 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 40/103 (39%), Positives = 58/103 (57%), Gaps = 6/103 (5%) Query 25 YIGLVDPHNSNSLYPPCLFKLLTGWNCPACGGLRMIHDLLHGELAASINDNVFLLVGVPV 84 Y+ +PH P C ++ LTG CP CGG RM +DLLHG+L A+ +DN +L+ +P Sbjct 49 YLYTRNPHLPGQWLPFCPWRRLTGLQCPGCGGTRMAYDLLHGDLLAAWHDNAAVLLAIPF 108 Query 85 LASWVLLRRRHG------DLALPIPVMIAVAVAVIAWTVLRNL 121 +A W +R RHG L + + A+ A + WT+ RNL Sbjct 109 IALWYAVRLRHGLAGRYWKLRMDRRAVTALLGAAVLWTIGRNL 151 >gi|295839474|ref|ZP_06826407.1| membrane protein [Streptomyces sp. SPB74] gi|295827495|gb|EFG65424.1| membrane protein [Streptomyces sp. SPB74] Length=140 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 45/107 (43%), Positives = 60/107 (57%), Gaps = 8/107 (7%) Query 23 LGYIGLVDPHNSNSLYPPCLFKLLTGWNCPACGGLRMIHDLLHGELAASINDNVFLLVGV 82 Y+G VDPH YP C LTG CP CGGLR H + HG+LAA+ DN ++G Sbjct 28 FAYVGAVDPHEPGH-YPACPLLRLTGLYCPGCGGLRSAHAVAHGDLAAAFQDNALAVLGY 86 Query 83 PVLA----SWVLLRRRHGDLALPIP---VMIAVAVAVIAWTVLRNLP 122 + A W + R DLA P+P + A+A V+A+T++RNLP Sbjct 87 GLAAVLWLVWTVRAARGRDLAPPLPPARLRWALAAVVLAFTLVRNLP 133 >gi|116878390|ref|YP_355801.2| hypothetical protein Pcar_0371 [Pelobacter carbinolicus DSM 2380] gi|114843026|gb|ABA87631.2| conserved hypothetical protein [Pelobacter carbinolicus DSM 2380] Length=145 Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/104 (39%), Positives = 54/104 (52%), Gaps = 15/104 (14%) Query 34 SNSLYPPCLFKLLTGWNCPACGGLRMIHDLLHGELAASINDNVFLLVGVPVLASWVLLR- 92 N +PPC F+ LTGW CP CG R +H LLHG + A+ N ++V VP L L+R Sbjct 39 ENRWFPPCPFRSLTGWYCPGCGSTRALHHLLHGRIGAAFGYNALMVVSVPFL----LVRG 94 Query 93 ----------RRHGDLALPIPVMIAVAVAVIAWTVLRNLPGFPL 126 R + AL +I + V V+ + VLRNLP +P Sbjct 95 VAGLIPGRALRGFDEKALKPAAIIGICVLVVVYGVLRNLPAYPF 138 >gi|297201906|ref|ZP_06919303.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083] gi|197712721|gb|EDY56755.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083] Length=137 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 37/78 (48%), Positives = 48/78 (62%), Gaps = 2/78 (2%) Query 8 RRYAAAGSVVLLAGALG--YIGLVDPHNSNSLYPPCLFKLLTGWNCPACGGLRMIHDLLH 65 R A A S VL+AGA+G Y+ DPH + P C F++LTG CPACGG RM++DL+H Sbjct 14 RHPATAPSAVLVAGAVGAVYLYRTDPHEPGHVLPQCPFRMLTGLLCPACGGTRMVYDLMH 73 Query 66 GELAASINDNVFLLVGVP 83 G + DN LL+ P Sbjct 74 GHFTEAWLDNRALLLASP 91 >gi|318061970|ref|ZP_07980691.1| hypothetical protein SSA3_28810 [Streptomyces sp. SA3_actG] gi|318081597|ref|ZP_07988912.1| hypothetical protein SSA3_33942 [Streptomyces sp. SA3_actF] Length=140 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 45/115 (40%), Positives = 63/115 (55%), Gaps = 8/115 (6%) Query 15 SVVLLAGALGYIGLVDPHNSNSLYPPCLFKLLTGWNCPACGGLRMIHDLLHGELAASIND 74 ++V +AGA Y+G VDP N YP C TG CP CGGLR H + HG+LAA+ D Sbjct 20 ALVGVAGAFAYVGAVDP-NEPGHYPACPLLRFTGIYCPGCGGLRSAHAVAHGDLAAAFQD 78 Query 75 NVFLLVGVPVLA----SWVLLRRRHGDLAL---PIPVMIAVAVAVIAWTVLRNLP 122 N ++G + A W + R DLA+ P + A+ V+ +T++RNLP Sbjct 79 NALAVLGYGLAAVLWLVWTVRAARGRDLAVLQPPARLRWALGAVVLVFTLVRNLP 133 >gi|302518472|ref|ZP_07270814.1| conserved hypothetical protein [Streptomyces sp. SPB78] gi|302427367|gb|EFK99182.1| conserved hypothetical protein [Streptomyces sp. SPB78] Length=140 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 45/113 (40%), Positives = 61/113 (54%), Gaps = 8/113 (7%) Query 17 VLLAGALGYIGLVDPHNSNSLYPPCLFKLLTGWNCPACGGLRMIHDLLHGELAASINDNV 76 V +AGA Y+G VDP N YP C TG CP CGGLR H + HG+LAA+ DN Sbjct 22 VGVAGAFAYVGAVDP-NEPGHYPACPLLRFTGIYCPGCGGLRSAHAVAHGDLAAAFQDNA 80 Query 77 FLLVGVPVLA----SWVLLRRRHGDLAL---PIPVMIAVAVAVIAWTVLRNLP 122 ++G + A W + R DLA+ P + A+ V+ +T++RNLP Sbjct 81 LAVLGYGLAAVLWLVWTVRAARGRDLAVLQPPARLRWALGAVVLVFTLVRNLP 133 >gi|86739560|ref|YP_479960.1| hypothetical protein Francci3_0847 [Frankia sp. CcI3] gi|86566422|gb|ABD10231.1| hypothetical protein Francci3_0847 [Frankia sp. CcI3] Length=170 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 48/119 (41%), Positives = 66/119 (56%), Gaps = 10/119 (8%) Query 13 AGSVVLLAGALGYIG---LVDPHNSNSLYPPCLFKLLTGWNCPACGGLRMIHDLLHGELA 69 AG VL A+G G LVDP YP C F+ T +CP CG LR +H LLHG LA Sbjct 44 AGFAVLGVAAVGVCGRVYLVDPAQPGH-YPMCPFRWATSLDCPGCGTLRGLHQLLHGHLA 102 Query 70 ASINDNVFLLVGVPVLA-SWVLLRRRHGDLALPIP-----VMIAVAVAVIAWTVLRNLP 122 A+ + NV+ ++ P+L W++ R P+P ++ AV + +IA+ VLRNLP Sbjct 103 AAADYNVYFVIAAPMLVFGWIVAVARAAGWRHPLPRVPARLLPAVPILIIAFWVLRNLP 161 >gi|333027848|ref|ZP_08455912.1| hypothetical protein STTU_5352 [Streptomyces sp. Tu6071] gi|332747700|gb|EGJ78141.1| hypothetical protein STTU_5352 [Streptomyces sp. Tu6071] Length=140 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 45/113 (40%), Positives = 61/113 (54%), Gaps = 8/113 (7%) Query 17 VLLAGALGYIGLVDPHNSNSLYPPCLFKLLTGWNCPACGGLRMIHDLLHGELAASINDNV 76 V +AGA Y+G VDP N YP C TG CP CGGLR H + HG+LAA+ DN Sbjct 22 VGVAGAFAYVGAVDP-NEPGHYPACPLLRFTGIYCPGCGGLRSAHAVAHGDLAAAFQDNA 80 Query 77 FLLVGVPVLA----SWVLLRRRHGDLAL---PIPVMIAVAVAVIAWTVLRNLP 122 ++G + A W + R DLA+ P + A+ V+ +T++RNLP Sbjct 81 LAVLGYGLAAVLWLVWAVRAARGRDLAVLQPPARLRWALGAVVLVFTLVRNLP 133 >gi|46310127|gb|AAS87345.1| hypothetical protein [uncultured gamma proteobacterium] Length=152 Score = 71.6 bits (174), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 40/109 (37%), Positives = 58/109 (54%), Gaps = 11/109 (10%) Query 22 ALGYIGLVDPHNSNSLYPPCLFKLLTGWNCPACGGLRMIHDLLHGELAASINDNVFLLVG 81 ALG + +P +S YP C F LTGW CP CGGLR +H LLHGE+ + N +++ Sbjct 38 ALGVLFWFNP-AQHSFYPFCAFHRLTGWQCPGCGGLRAVHHLLHGEVVTAFRFNQLVVLA 96 Query 82 VPVLASWVLLRR--------RHGDLALPIPVMIAVAVAVIAWTVLRNLP 122 +P +A W +RR ++ A A+ + ++ W V RNLP Sbjct 97 LPCVA-WFTVRRWLRGPQRGKYSHQAQARWAWFALGILIVFWIV-RNLP 143 >gi|171909573|ref|ZP_02925043.1| hypothetical protein VspiD_00335 [Verrucomicrobium spinosum DSM 4136] Length=142 Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 47/137 (35%), Positives = 65/137 (48%), Gaps = 10/137 (7%) Query 1 MEASGRQRRYAAAGSVVLLAGALG-YIGLVDPHNSNSLYPPCLFKLLTGWNCPACGGLRM 59 M+ S A GS +L+A +G ++ P N LYP C+F LTGW+C CG R Sbjct 1 MKRSPSTASRIALGSALLMAMLMGAFVLYQHPPEDNGLYPQCMFHRLTGWHCSGCGATRC 60 Query 60 IHDLLHGELAASINDNVFLLVGVPV--------LASWVLLRRRHGDLALPIPVM-IAVAV 110 +H LLH + N+ +VG+PV L W+L L P M IA V Sbjct 61 LHALLHLRFEEAARKNILAMVGLPVLGFLFLRGLGRWMLNHPTPPPLKGPSRFMAIATVV 120 Query 111 AVIAWTVLRNLPGFPLV 127 ++ + V+RNLP P Sbjct 121 IILGFGVVRNLPWPPFT 137 >gi|229820709|ref|YP_002882235.1| hypothetical protein Bcav_2222 [Beutenbergia cavernae DSM 12333] gi|229566622|gb|ACQ80473.1| conserved hypothetical protein [Beutenbergia cavernae DSM 12333] Length=150 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 47/123 (39%), Positives = 67/123 (55%), Gaps = 8/123 (6%) Query 6 RQRRYAAAGSVVLLAGALGYIGLVDPHNSNSLYPPCLFKLLTGWNCPACGGLRMIHDLLH 65 R R G+ ++A A + L DPH S Y C F LTG+ CP CGGLR +HDL+H Sbjct 18 RPRWRGVLGTGAVVAAATLLVALHDPHQPGS-YLSCPFLTLTGFACPGCGGLRAVHDLVH 76 Query 66 GELAASINDNVFLLVGVPVLAS------WVLLRRRHGDLALPIPVMIAVAVAVIAWTVLR 119 +LAA+ N ++V VP+ + W + RRR P ++ +AV V+ + VLR Sbjct 77 LDLAAAWAMNPLVVVFVPITIALWLVWLWRVARRRAAWQPGPR-TIVGLAVLVVTFWVLR 135 Query 120 NLP 122 N+P Sbjct 136 NVP 138 >gi|312199663|ref|YP_004019724.1| hypothetical protein FraEuI1c_5870 [Frankia sp. EuI1c] gi|311230999|gb|ADP83854.1| hypothetical protein FraEuI1c_5870 [Frankia sp. EuI1c] Length=164 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 44/105 (42%), Positives = 58/105 (56%), Gaps = 8/105 (7%) Query 26 IGLVDPHNSNSLYPPCLFKLLT-GWNCPACGGLRMIHDLLHGELAASINDNVFLLVGVPV 84 I LVDP YPPC FK T G +CP CG +R +H LLHG L A+ N N+ L+V P Sbjct 53 IYLVDPAQPGH-YPPCPFKWATRGLDCPGCGSMRGLHQLLHGHLGAAANYNILLVVAAPC 111 Query 85 L-ASWVLLRRRHGDLALPIPVMI-----AVAVAVIAWTVLRNLPG 123 L W + R + + P M A+ +AVIA+ ++RN PG Sbjct 112 LVVGWFVAVLRLLGVGVRTPRMPSLLNRAIPIAVIAFWIIRNTPG 156 >gi|29832716|ref|NP_827350.1| hypothetical protein SAV_6174 [Streptomyces avermitilis MA-4680] gi|29609836|dbj|BAC73885.1| hypothetical protein [Streptomyces avermitilis MA-4680] Length=162 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 47/122 (39%), Positives = 66/122 (55%), Gaps = 8/122 (6%) Query 8 RRYAAAGSVVL-LAGALGYIGLVDPHNSNSLYPPCLFKLLTGWNCPACGGLRMIHDLLHG 66 RR A G V+ + GA Y+G VDP N YP C TG CP CGGLR H +HG Sbjct 35 RRLAVPGGVLAAVVGAFAYVGAVDP-NQPGHYPVCPLLRFTGVYCPGCGGLRSAHAFVHG 93 Query 67 ELAASINDNVFLLVGVPVLA----SWVLLRRRHGDLALPI-PVMI-AVAVAVIAWTVLRN 120 +L+A++ DN + G V A WV+ R + + + PV + +V ++ +TV+RN Sbjct 94 DLSAALTDNAVAVAGYFVFAVVWTFWVVRAARGRPVRIDLGPVHLWSVGALLLVFTVVRN 153 Query 121 LP 122 LP Sbjct 154 LP 155 >gi|337765171|emb|CCB73880.1| conserved membrane protein of unknown function [Streptomyces cattleya NRRL 8057] Length=155 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 34/73 (47%), Positives = 43/73 (59%), Gaps = 4/73 (5%) Query 23 LGYIGLVDPHNSNSLYPPCLFKLLTGWNCPACGGLRMIHDLLHGELAASINDNVFLLVG- 81 GY+ +VDP YP C F+ TGW CPACGGLR H + HG+LAA++ DN ++G Sbjct 38 FGYVAVVDPGRPGH-YPGCPFRAATGWYCPACGGLRSAHAVAHGDLAAALRDNALAVLGY 96 Query 82 --VPVLASWVLLR 92 VL W L R Sbjct 97 GAAAVLWVWWLCR 109 >gi|296269428|ref|YP_003652060.1| hypothetical protein Tbis_1449 [Thermobispora bispora DSM 43833] gi|296092215|gb|ADG88167.1| conserved hypothetical protein [Thermobispora bispora DSM 43833] Length=162 Score = 67.4 bits (163), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 34/65 (53%), Positives = 43/65 (67%), Gaps = 5/65 (7%) Query 30 DPHNSNSLYPPCLFKLLTGWNCPACGGLRMIHDLLHGELAASINDNVFLLVGVPVL---- 85 DPH + L P C F LLTGW CPACGGLR +HDL HG+LA +++ N ++ G PV+ Sbjct 57 DPHRAGRL-PLCPFFLLTGWYCPACGGLRAVHDLAHGDLAGALDMNPLVVAGAPVVLGIW 115 Query 86 ASWVL 90 A W L Sbjct 116 ARWTL 120 >gi|320011339|gb|ADW06189.1| hypothetical protein Sfla_4788 [Streptomyces flavogriseus ATCC 33331] Length=188 Score = 67.0 bits (162), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 48/124 (39%), Positives = 64/124 (52%), Gaps = 8/124 (6%) Query 6 RQRRYAA-AGSVVLLAGALGYIGLVDPHNSNSLYPPCLFKLLTGWNCPACGGLRMIHDLL 64 R RR AA AG + + GA GY+ VDP N YP C LTG CP CGGLR H Sbjct 59 RLRRLAAPAGVLAAVVGAFGYVAAVDP-NEPGHYPVCPMLRLTGVFCPGCGGLRSAHAFA 117 Query 65 HGELAASINDNVFLLVGVPVLAS----WVLL--RRRHGDLALPIPVMIAVAVAVIAWTVL 118 HG+L A++ N + G VLA+ WV+ R R + L + ++ ++V+ Sbjct 118 HGDLTAALGANALAVAGYVVLAAVWALWVVRASRGRPLRIGLAPGYWWGIGAVLLVFSVV 177 Query 119 RNLP 122 RNLP Sbjct 178 RNLP 181 >gi|256379438|ref|YP_003103098.1| hypothetical protein Amir_5433 [Actinosynnema mirum DSM 43827] gi|255923741|gb|ACU39252.1| conserved hypothetical protein [Actinosynnema mirum DSM 43827] Length=141 Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 43/100 (43%), Positives = 54/100 (54%), Gaps = 6/100 (6%) Query 28 LVDPHNSNSLYPPCLFKLLTGWNCPACGGLRMIHDLLHGELAASINDNVFLLVGVPVLAS 87 LVDP+ S PPC + LTG CPACG RM H LLHG+LAA+ N +LV LA Sbjct 36 LVDPNEPGSWLPPCPLRALTGIWCPACGATRMAHALLHGDLAAAWQFNAVVLVAGMPLAL 95 Query 88 WVLLR----RRHGDLALPIPVMIA--VAVAVIAWTVLRNL 121 W+ R R G +P ++ V VA + W + RNL Sbjct 96 WLWGRWLRARLRGTPTPQVPPVVGNLVIVACVVWMLARNL 135 >gi|302546212|ref|ZP_07298554.1| putative membrane protein [Streptomyces hygroscopicus ATCC 53653] gi|302463830|gb|EFL26923.1| putative membrane protein [Streptomyces himastatinicus ATCC 53653] Length=149 Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 47/124 (38%), Positives = 62/124 (50%), Gaps = 9/124 (7%) Query 7 QRRYAAAGSVVLLAGALGYIGLVDPHNSNSLYPPCLFKLLTGWNCPACGGLRMIHDLLHG 66 +R A G + +A AL Y+G VDPH YP C LTG CP CGGLR H L HG Sbjct 20 RRLLAPLGVLTGVAAALAYVGAVDPHQPGH-YPVCPLFRLTGLYCPGCGGLRSAHALAHG 78 Query 67 ELAASINDNVF-LLVGVPVLASWVL-------LRRRHGDLALPIPVMIAVAVAVIAWTVL 118 EL ++ DN ++ G +WV+ RRR +A AV+A+T++ Sbjct 79 ELLPALGDNALVVVCGGVFCVAWVVWCVRALGWRRRRVVWTWQTWHAWVIAGAVLAFTLI 138 Query 119 RNLP 122 RN P Sbjct 139 RNFP 142 >gi|297199016|ref|ZP_06916413.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083] gi|197716029|gb|EDY60063.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083] Length=146 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 49/126 (39%), Positives = 68/126 (54%), Gaps = 8/126 (6%) Query 4 SGRQRRYAAAGSVVL-LAGALGYIGLVDPHNSNSLYPPCLFKLLTGWNCPACGGLRMIHD 62 +G R A G ++ +AGA Y+G VDP N YP C +TG CP CGGLR H Sbjct 15 TGLAGRLAVPGGILAAVAGAFAYVGSVDP-NQPGHYPVCPLYRITGLYCPGCGGLRSAHA 73 Query 63 LLHGELAASINDN---VFLLVGVPVLAS-WVLLRRRHGDLALPI-PVMIAVA-VAVIAWT 116 +HG+ A++ DN V +G VL + WV+ R L L + PV + A ++ +T Sbjct 74 FIHGDFLAALQDNAPAVLGYLGFAVLWTVWVVRAARGRPLELGLGPVHLWTAGTLLLVFT 133 Query 117 VLRNLP 122 V+RNLP Sbjct 134 VVRNLP 139 >gi|29829943|ref|NP_824577.1| hypothetical protein SAV_3400 [Streptomyces avermitilis MA-4680] gi|29607053|dbj|BAC71112.1| hypothetical protein [Streptomyces avermitilis MA-4680] Length=136 Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 31/70 (45%), Positives = 41/70 (59%), Gaps = 4/70 (5%) Query 25 YIGLVDPHNSNSLYPPCLFKLLTGWNCPACGGLRMIHDLLHGELAASINDNVFLLVGVP- 83 Y+ DPH + P C +L+TG CPACGG RM++DL+HG A+ DN LL+ P Sbjct 32 YLYTTDPHEPGHVLPRCPLRLVTGLLCPACGGTRMVYDLMHGHFTAAWLDNRLLLLASPF 91 Query 84 ---VLASWVL 90 +LA W L Sbjct 92 ALGLLARWFL 101 >gi|111220929|ref|YP_711723.1| hypothetical protein FRAAL1476 [Frankia alni ACN14a] gi|111148461|emb|CAJ60132.1| Putative membrane protein [Frankia alni ACN14a] Length=122 Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 41/103 (40%), Positives = 55/103 (54%), Gaps = 7/103 (6%) Query 26 IGLVDPHNSNSLYPPCLFKLLTGWNCPACGGLRMIHDLLHGELAASINDNVFLLVGVPVL 85 + LVDP YP C F+ T +CP CG LR +H LLHG A+ + N+F +V P+L Sbjct 12 VYLVDPAQPGH-YPTCPFRWATSMDCPGCGTLRGLHQLLHGHPGAAADYNLFFVVAAPML 70 Query 86 -ASWVLLRRRHGDLALPIPVMIA-----VAVAVIAWTVLRNLP 122 W + R P+P + A + V VIA+ VLRNLP Sbjct 71 VVGWTVAVARATGWQHPLPRVPARLLPIIPVLVIAFWVLRNLP 113 >gi|120405668|ref|YP_955497.1| hypothetical protein Mvan_4717 [Mycobacterium vanbaalenii PYR-1] gi|119958486|gb|ABM15491.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=140 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 43/121 (36%), Positives = 60/121 (50%), Gaps = 17/121 (14%) Query 18 LLAGALGYIGLVDPHNSNSLYPPCLFKLLTGWNCPACGGLRMIHDLLHGELAASINDNVF 77 L AGA + + DP L P C K L G +CP CG LRMI+ LLHG++ A+I N Sbjct 20 LAAGACAVVWVADPTTPGGLLPQCPTKALLGVDCPGCGALRMIYSLLHGDVLAAIRFNAL 79 Query 78 LLVG----VPVLASW----VLLRR----RHGDLALPIPVMIAVAVAVIAWTVLRNLPGFP 125 +V V A+W ++ RR +H A P+ + + V+ W VLR +P P Sbjct 80 AVVALGFLVVAFAAWTYGRIVDRRMVSWQHHKWAAPVTLAV-----VVVWFVLRIMPFAP 134 Query 126 L 126 Sbjct 135 F 135 >gi|329938076|ref|ZP_08287527.1| hypothetical protein SGM_3019 [Streptomyces griseoaurantiacus M045] gi|329302565|gb|EGG46455.1| hypothetical protein SGM_3019 [Streptomyces griseoaurantiacus M045] Length=139 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 32/70 (46%), Positives = 40/70 (58%), Gaps = 2/70 (2%) Query 8 RRYAAAGSVVLLAG--ALGYIGLVDPHNSNSLYPPCLFKLLTGWNCPACGGLRMIHDLLH 65 RR AA V AG GY+ + DPH L P C F+ +TG CPACGG RM++DL+H Sbjct 17 RRPGAAPLAVCAAGLAGAGYLYVTDPHEPGHLLPGCPFRFVTGLLCPACGGTRMVYDLMH 76 Query 66 GELAASINDN 75 G + DN Sbjct 77 GHFGQAWLDN 86 >gi|291443948|ref|ZP_06583338.1| conserved hypothetical protein [Streptomyces roseosporus NRRL 15998] gi|291346895|gb|EFE73799.1| conserved hypothetical protein [Streptomyces roseosporus NRRL 15998] Length=149 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 46/128 (36%), Positives = 62/128 (49%), Gaps = 8/128 (6%) Query 2 EASGRQRRYAAA-GSVVLLAGALGYIGLVDPHNSNSLYPPCLFKLLTGWNCPACGGLRMI 60 + GR RR G + + GA Y+G VDP N YP C LTG CP CGGLR Sbjct 16 DQVGRVRRLGTPLGILAAVTGAFAYVGTVDP-NEPGHYPVCPLLKLTGVFCPGCGGLRSA 74 Query 61 HDLLHGELAASINDNVFLLVGVPVLAS-WV--LLRRRHGD---LALPIPVMIAVAVAVIA 114 H + G+L A+ + N G + A+ WV L+R G + L V ++ Sbjct 75 HAFITGDLGAAFSANAIATAGYFLFAAVWVLWLVRAWRGKPLRIGLAPAWWWGVGAVLLV 134 Query 115 WTVLRNLP 122 +TV+RNLP Sbjct 135 FTVVRNLP 142 >gi|197301623|ref|ZP_03166696.1| hypothetical protein RUMLAC_00350 [Ruminococcus lactaris ATCC 29176] gi|197299353|gb|EDY33880.1| hypothetical protein RUMLAC_00350 [Ruminococcus lactaris ATCC 29176] Length=154 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 44/134 (33%), Positives = 65/134 (49%), Gaps = 14/134 (10%) Query 3 ASGRQRRYAAAGSVVLLAG-ALGYIGLVDPHNSNSLYP-PCLFKLLTGWNCPACGGLRMI 60 A R+ R + +AG GY+ +P YP PCLF ++TG CP CG R Sbjct 12 AQSRKNRILFLAVIGCMAGIGAGYLYFHNPLK----YPLPCLFHVITGLYCPGCGAGRAS 67 Query 61 HDLLHGELAASINDN---VFLL-----VGVPVLASWVLLRRRHGDLALPIPVMIAVAVAV 112 +++LHG + N VFLL V V A W L + H D + ++I + V + Sbjct 68 YNILHGNFLTAFCYNPVMVFLLPFLGIYFVTVAADWALTGKNHVDKKINPKILIGILVFL 127 Query 113 IAWTVLRNLPGFPL 126 + + V+RNLP +P Sbjct 128 LIFGVIRNLPFYPF 141 >gi|302561172|ref|ZP_07313514.1| membrane protein [Streptomyces griseoflavus Tu4000] gi|302478790|gb|EFL41883.1| membrane protein [Streptomyces griseoflavus Tu4000] Length=151 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 41/106 (39%), Positives = 59/106 (56%), Gaps = 7/106 (6%) Query 23 LGYIGLVDPHNSNSLYPPCLFKLLTGWNCPACGGLRMIHDLLHGELAASINDNVFLLVGV 82 Y+G VDP N YP C LTG CP CGGLR H ++HG+L A++ N ++G Sbjct 40 FAYVGAVDP-NEPGHYPACPLLRLTGLYCPGCGGLRSAHAVVHGDLPAALQANAPAVLGY 98 Query 83 PVLA----SWVLLRRRHGDLAL-PIPVMI-AVAVAVIAWTVLRNLP 122 V A WV+ R L + P P ++ ++ ++A+TV+RNLP Sbjct 99 AVFAVLWTVWVVRAVRGRPLRIDPPPALVWSLGGLLLAFTVVRNLP 144 >gi|239987000|ref|ZP_04707664.1| hypothetical protein SrosN1_06812 [Streptomyces roseosporus NRRL 11379] Length=194 Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 46/128 (36%), Positives = 62/128 (49%), Gaps = 8/128 (6%) Query 2 EASGRQRRYAAA-GSVVLLAGALGYIGLVDPHNSNSLYPPCLFKLLTGWNCPACGGLRMI 60 + GR RR G + + GA Y+G VDP N YP C LTG CP CGGLR Sbjct 61 DQVGRVRRLGTPLGILAAVTGAFAYVGTVDP-NEPGHYPVCPLLKLTGVFCPGCGGLRSA 119 Query 61 HDLLHGELAASINDNVFLLVGVPVLAS-WV--LLRRRHGD---LALPIPVMIAVAVAVIA 114 H + G+L A+ + N G + A+ WV L+R G + L V ++ Sbjct 120 HAFITGDLGAAFSANAIATAGYFLFAAVWVLWLVRAWRGKPLRIGLAPAWWWGVGAVLLV 179 Query 115 WTVLRNLP 122 +TV+RNLP Sbjct 180 FTVVRNLP 187 >gi|296137879|ref|YP_003645122.1| hypothetical protein Tpau_0129 [Tsukamurella paurometabola DSM 20162] gi|296026013|gb|ADG76783.1| conserved hypothetical protein [Tsukamurella paurometabola DSM 20162] Length=139 Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 45/137 (33%), Positives = 67/137 (49%), Gaps = 16/137 (11%) Query 4 SGRQRRYAAAGSVVLLAGALGYI---GLVDPHNSNSLYPPCLFKLLTGWNCPACGGLRMI 60 SG R AAAG ++ G G + L DPH S + C ++G CP CGGLR + Sbjct 7 SGGDRLRAAAGPILAATGVGGLVLALHLRDPHVEYS-WGVCPLYAISGVYCPGCGGLRAV 65 Query 61 HDLLHGELAASINDN--VFLLVGVPVLASWVLLRRRHGDLALPIPVM-------IAVAVA 111 +DL + + A + + N V+ + G+ + W+ LR + +P + I V VA Sbjct 66 NDLTNFDFAGAFSSNLLVYPIAGILI---WLWLRWLGSAVGFDVPAVPKNRWLWIGVGVA 122 Query 112 VIAWTVLRNLPGFPLVP 128 + W V RN+PG P P Sbjct 123 IAVWCVARNVPGSPFAP 139 Lambda K H 0.326 0.143 0.459 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 130990493970 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40