BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1619 Length=484 Score E Sequences producing significant alignments: (Bits) Value gi|15608757|ref|NP_216135.1| hypothetical protein Rv1619 [Mycoba... 970 0.0 gi|254231822|ref|ZP_04925149.1| conserved membrane protein [Myco... 969 0.0 gi|306779616|ref|ZP_07417953.1| conserved membrane protein [Myco... 968 0.0 gi|289554607|ref|ZP_06443817.1| conserved membrane protein [Myco... 967 0.0 gi|289757721|ref|ZP_06517099.1| conserved hypothetical protein [... 960 0.0 gi|308400908|ref|ZP_07493312.2| conserved membrane protein [Myco... 930 0.0 gi|183982436|ref|YP_001850727.1| hypothetical protein MMAR_2422 ... 691 0.0 gi|118617244|ref|YP_905576.1| hypothetical protein MUL_1600 [Myc... 689 0.0 gi|41407410|ref|NP_960246.1| hypothetical protein MAP1312 [Mycob... 667 0.0 gi|254820969|ref|ZP_05225970.1| hypothetical protein MintA_13625... 667 0.0 gi|118463474|ref|YP_882351.1| hypothetical protein MAV_3168 [Myc... 665 0.0 gi|296164485|ref|ZP_06847057.1| conserved hypothetical protein [... 664 0.0 gi|336457898|gb|EGO36891.1| hypothetical protein MAPs_18600 [Myc... 662 0.0 gi|254775615|ref|ZP_05217131.1| hypothetical protein MaviaA2_132... 662 0.0 gi|240167996|ref|ZP_04746655.1| hypothetical protein MkanA1_0168... 657 0.0 gi|342860811|ref|ZP_08717461.1| hypothetical protein MCOL_18108 ... 655 0.0 gi|169629721|ref|YP_001703370.1| hypothetical protein MAB_2636c ... 513 4e-143 gi|296169077|ref|ZP_06850737.1| conserved hypothetical protein [... 512 6e-143 gi|226360750|ref|YP_002778528.1| hypothetical protein ROP_13360 ... 365 9e-99 gi|111018637|ref|YP_701609.1| lysyl-tRNA synthetase [Rhodococcus... 353 5e-95 gi|256396684|ref|YP_003118248.1| hypothetical protein Caci_7583 ... 213 7e-53 gi|300782209|ref|YP_003762500.1| lysyl-tRNA synthetase [Amycolat... 142 1e-31 gi|300783136|ref|YP_003763427.1| lysyl-tRNA synthetase, class II... 141 3e-31 gi|302531633|ref|ZP_07283975.1| integral membrane lysyl-tRNA syn... 140 5e-31 gi|284990815|ref|YP_003409369.1| lysyl-tRNA synthetase [Geoderma... 139 9e-31 gi|331697678|ref|YP_004333917.1| lysyl-tRNA synthetase [Pseudono... 139 1e-30 gi|256375052|ref|YP_003098712.1| lysyl-tRNA synthetase [Actinosy... 137 4e-30 gi|325003614|ref|ZP_08124726.1| lysyl-tRNA synthetase [Pseudonoc... 136 1e-29 gi|302524477|ref|ZP_07276819.1| lysyl-tRNA synthetase [Streptomy... 135 1e-29 gi|284034397|ref|YP_003384328.1| lysyl-tRNA synthetase [Kribbell... 134 5e-29 gi|345016122|ref|YP_004818476.1| hypothetical protein Strvi_8895... 132 2e-28 gi|328883296|emb|CCA56535.1| putative membrane protein found fus... 132 2e-28 gi|297192930|ref|ZP_06910328.1| integral membrane lysyl-tRNA syn... 130 4e-28 gi|254385657|ref|ZP_05000980.1| integral membrane lysyl-tRNA syn... 130 4e-28 gi|297159336|gb|ADI09048.1| hypothetical protein SBI_05928 [Stre... 130 7e-28 gi|336179328|ref|YP_004584703.1| hypothetical protein FsymDg_349... 129 9e-28 gi|297161202|gb|ADI10914.1| integral membrane protein [Streptomy... 129 1e-27 gi|337769039|emb|CCB77752.1| Integral membrane protein [Streptom... 129 1e-27 gi|312197856|ref|YP_004017917.1| membrane protein with lysine tr... 129 1e-27 gi|21224696|ref|NP_630475.1| integral membrane lysyl-tRNA synthe... 128 2e-27 gi|290958419|ref|YP_003489601.1| protein [Streptomyces scabiei 8... 128 2e-27 gi|309810941|ref|ZP_07704741.1| lysine--tRNA ligase [Dermacoccus... 128 2e-27 gi|111223635|ref|YP_714429.1| putative membrane protein with lys... 128 3e-27 gi|294630634|ref|ZP_06709194.1| lysyl-tRNA synthetase [Streptomy... 127 3e-27 gi|302535209|ref|ZP_07287551.1| integral membrane lysyl-tRNA syn... 127 3e-27 gi|302544360|ref|ZP_07296702.1| putative lysyl-tRNA synthetase [... 127 3e-27 gi|297201407|ref|ZP_06918804.1| integral membrane lysyl-tRNA syn... 127 3e-27 gi|302553177|ref|ZP_07305519.1| integral membrane lysyl-tRNA syn... 127 4e-27 gi|256395921|ref|YP_003117485.1| hypothetical protein Caci_6803 ... 127 6e-27 gi|152966432|ref|YP_001362216.1| hypothetical protein Krad_2476 ... 127 6e-27 >gi|15608757|ref|NP_216135.1| hypothetical protein Rv1619 [Mycobacterium tuberculosis H37Rv] gi|15841074|ref|NP_336111.1| hypothetical protein MT1655 [Mycobacterium tuberculosis CDC1551] gi|31792805|ref|NP_855298.1| hypothetical protein Mb1645 [Mycobacterium bovis AF2122/97] 54 more sequence titles Length=484 Score = 970 bits (2507), Expect = 0.0, Method: Compositional matrix adjust. Identities = 484/484 (100%), Positives = 484/484 (100%), Gaps = 0/484 (0%) Query 1 MVAAAGEPLNCQRANPEVTVKLPSADVVPRLRGRQRVVVHVDSRTARCVGALALVCAACW 60 MVAAAGEPLNCQRANPEVTVKLPSADVVPRLRGRQRVVVHVDSRTARCVGALALVCAACW Sbjct 1 MVAAAGEPLNCQRANPEVTVKLPSADVVPRLRGRQRVVVHVDSRTARCVGALALVCAACW 60 Query 61 LIALLAGDYRHAQWAVAGRLGWSLTVLAAVAFIARGIFLGRPVTAMHATAAGLFLLAGLA 120 LIALLAGDYRHAQWAVAGRLGWSLTVLAAVAFIARGIFLGRPVTAMHATAAGLFLLAGLA Sbjct 61 LIALLAGDYRHAQWAVAGRLGWSLTVLAAVAFIARGIFLGRPVTAMHATAAGLFLLAGLA 120 Query 121 AHVLVADLLGEILIAGSGWALMWPTSAHPRPEDLPRVWALINATRADSLAPFAMQAGKSH 180 AHVLVADLLGEILIAGSGWALMWPTSAHPRPEDLPRVWALINATRADSLAPFAMQAGKSH Sbjct 121 AHVLVADLLGEILIAGSGWALMWPTSAHPRPEDLPRVWALINATRADSLAPFAMQAGKSH 180 Query 181 HFSAAGTAALAYRTRIGYAVVSGDPIGDEAQFPQLVADFAAMCHMHGWRIVVVGCSERRL 240 HFSAAGTAALAYRTRIGYAVVSGDPIGDEAQFPQLVADFAAMCHMHGWRIVVVGCSERRL Sbjct 181 HFSAAGTAALAYRTRIGYAVVSGDPIGDEAQFPQLVADFAAMCHMHGWRIVVVGCSERRL 240 Query 241 GLWSDPMVVGQSLRPIPIGRDVVIDVSNFEMTGRRFRNLRQAVKRTHNFGVTTEIVAEQQ 300 GLWSDPMVVGQSLRPIPIGRDVVIDVSNFEMTGRRFRNLRQAVKRTHNFGVTTEIVAEQQ Sbjct 241 GLWSDPMVVGQSLRPIPIGRDVVIDVSNFEMTGRRFRNLRQAVKRTHNFGVTTEIVAEQQ 300 Query 301 LDDQRQAELAEVLAASPSGARTDRGFCMNLDGVLEGRYPGIQLIIARDASGRVQGFHRYA 360 LDDQRQAELAEVLAASPSGARTDRGFCMNLDGVLEGRYPGIQLIIARDASGRVQGFHRYA Sbjct 301 LDDQRQAELAEVLAASPSGARTDRGFCMNLDGVLEGRYPGIQLIIARDASGRVQGFHRYA 360 Query 361 TAGGGSDMSLDVPWRRRGAPNGIDERLSADMIAAAKDAGVQRLSLAFAAFPDLFGANQLG 420 TAGGGSDMSLDVPWRRRGAPNGIDERLSADMIAAAKDAGVQRLSLAFAAFPDLFGANQLG Sbjct 361 TAGGGSDMSLDVPWRRRGAPNGIDERLSADMIAAAKDAGVQRLSLAFAAFPDLFGANQLG 420 Query 421 RLQRVCRALIHILDPLIALESLYRYLRKFHALDERRYVLISMTQVFALALVLLSLEFVPR 480 RLQRVCRALIHILDPLIALESLYRYLRKFHALDERRYVLISMTQVFALALVLLSLEFVPR Sbjct 421 RLQRVCRALIHILDPLIALESLYRYLRKFHALDERRYVLISMTQVFALALVLLSLEFVPR 480 Query 481 RRHL 484 RRHL Sbjct 481 RRHL 484 >gi|254231822|ref|ZP_04925149.1| conserved membrane protein [Mycobacterium tuberculosis C] gi|124600881|gb|EAY59891.1| conserved membrane protein [Mycobacterium tuberculosis C] Length=484 Score = 969 bits (2505), Expect = 0.0, Method: Compositional matrix adjust. Identities = 483/484 (99%), Positives = 483/484 (99%), Gaps = 0/484 (0%) Query 1 MVAAAGEPLNCQRANPEVTVKLPSADVVPRLRGRQRVVVHVDSRTARCVGALALVCAACW 60 MVAAAGEPLNCQRANPEVTVKLPSADVVPRLRGRQRVVVHVDSRTARCVGALALVCAACW Sbjct 1 MVAAAGEPLNCQRANPEVTVKLPSADVVPRLRGRQRVVVHVDSRTARCVGALALVCAACW 60 Query 61 LIALLAGDYRHAQWAVAGRLGWSLTVLAAVAFIARGIFLGRPVTAMHATAAGLFLLAGLA 120 LIALLAGDYRHAQWAVAGRLGWSLTVLAAVAFIARGIFLGRPVTAMHATAAGLFLLAGLA Sbjct 61 LIALLAGDYRHAQWAVAGRLGWSLTVLAAVAFIARGIFLGRPVTAMHATAAGLFLLAGLA 120 Query 121 AHVLVADLLGEILIAGSGWALMWPTSAHPRPEDLPRVWALINATRADSLAPFAMQAGKSH 180 AHVLVADLLGEILIAGSGWALMWPTSAHPRPEDLPRVWALINATRADSLAPFAMQAGKSH Sbjct 121 AHVLVADLLGEILIAGSGWALMWPTSAHPRPEDLPRVWALINATRADSLAPFAMQAGKSH 180 Query 181 HFSAAGTAALAYRTRIGYAVVSGDPIGDEAQFPQLVADFAAMCHMHGWRIVVVGCSERRL 240 HFSAAGTAALAYRTRIGYAVVSGDPIGDE QFPQLVADFAAMCHMHGWRIVVVGCSERRL Sbjct 181 HFSAAGTAALAYRTRIGYAVVSGDPIGDEVQFPQLVADFAAMCHMHGWRIVVVGCSERRL 240 Query 241 GLWSDPMVVGQSLRPIPIGRDVVIDVSNFEMTGRRFRNLRQAVKRTHNFGVTTEIVAEQQ 300 GLWSDPMVVGQSLRPIPIGRDVVIDVSNFEMTGRRFRNLRQAVKRTHNFGVTTEIVAEQQ Sbjct 241 GLWSDPMVVGQSLRPIPIGRDVVIDVSNFEMTGRRFRNLRQAVKRTHNFGVTTEIVAEQQ 300 Query 301 LDDQRQAELAEVLAASPSGARTDRGFCMNLDGVLEGRYPGIQLIIARDASGRVQGFHRYA 360 LDDQRQAELAEVLAASPSGARTDRGFCMNLDGVLEGRYPGIQLIIARDASGRVQGFHRYA Sbjct 301 LDDQRQAELAEVLAASPSGARTDRGFCMNLDGVLEGRYPGIQLIIARDASGRVQGFHRYA 360 Query 361 TAGGGSDMSLDVPWRRRGAPNGIDERLSADMIAAAKDAGVQRLSLAFAAFPDLFGANQLG 420 TAGGGSDMSLDVPWRRRGAPNGIDERLSADMIAAAKDAGVQRLSLAFAAFPDLFGANQLG Sbjct 361 TAGGGSDMSLDVPWRRRGAPNGIDERLSADMIAAAKDAGVQRLSLAFAAFPDLFGANQLG 420 Query 421 RLQRVCRALIHILDPLIALESLYRYLRKFHALDERRYVLISMTQVFALALVLLSLEFVPR 480 RLQRVCRALIHILDPLIALESLYRYLRKFHALDERRYVLISMTQVFALALVLLSLEFVPR Sbjct 421 RLQRVCRALIHILDPLIALESLYRYLRKFHALDERRYVLISMTQVFALALVLLSLEFVPR 480 Query 481 RRHL 484 RRHL Sbjct 481 RRHL 484 >gi|306779616|ref|ZP_07417953.1| conserved membrane protein [Mycobacterium tuberculosis SUMu002] gi|306784349|ref|ZP_07422671.1| conserved membrane protein [Mycobacterium tuberculosis SUMu003] gi|306788717|ref|ZP_07427039.1| conserved membrane protein [Mycobacterium tuberculosis SUMu004] 13 more sequence titles Length=484 Score = 968 bits (2503), Expect = 0.0, Method: Compositional matrix adjust. Identities = 483/484 (99%), Positives = 484/484 (100%), Gaps = 0/484 (0%) Query 1 MVAAAGEPLNCQRANPEVTVKLPSADVVPRLRGRQRVVVHVDSRTARCVGALALVCAACW 60 MVAAAGEPLNCQRANPEVTVKLPSADVVPRLRGRQRVVVHVDSRTARCVGALALVCAACW Sbjct 1 MVAAAGEPLNCQRANPEVTVKLPSADVVPRLRGRQRVVVHVDSRTARCVGALALVCAACW 60 Query 61 LIALLAGDYRHAQWAVAGRLGWSLTVLAAVAFIARGIFLGRPVTAMHATAAGLFLLAGLA 120 LIALLAGDYRHAQWAVAGRLGWSLTVLAAVAFIARGIFLGRPVTAMHATAAGLFLLAGLA Sbjct 61 LIALLAGDYRHAQWAVAGRLGWSLTVLAAVAFIARGIFLGRPVTAMHATAAGLFLLAGLA 120 Query 121 AHVLVADLLGEILIAGSGWALMWPTSAHPRPEDLPRVWALINATRADSLAPFAMQAGKSH 180 AHVLVADLLGEILIAGSGWALMWPTSAHPRPEDLPRVWALINATRADSLAPFAMQAGKSH Sbjct 121 AHVLVADLLGEILIAGSGWALMWPTSAHPRPEDLPRVWALINATRADSLAPFAMQAGKSH 180 Query 181 HFSAAGTAALAYRTRIGYAVVSGDPIGDEAQFPQLVADFAAMCHMHGWRIVVVGCSERRL 240 HFSAAGTAALAYRTRIGYAVVSGDPIGDEAQFPQLVADFAAMCHMHGWRIVVVGCSERRL Sbjct 181 HFSAAGTAALAYRTRIGYAVVSGDPIGDEAQFPQLVADFAAMCHMHGWRIVVVGCSERRL 240 Query 241 GLWSDPMVVGQSLRPIPIGRDVVIDVSNFEMTGRRFRNLRQAVKRTHNFGVTTEIVAEQQ 300 GLWSDPMVVGQSLRPIPIGRDVVIDVSNFEMTGRRFRNLRQAVKRTHNFGVTTEIVAEQQ Sbjct 241 GLWSDPMVVGQSLRPIPIGRDVVIDVSNFEMTGRRFRNLRQAVKRTHNFGVTTEIVAEQQ 300 Query 301 LDDQRQAELAEVLAASPSGARTDRGFCMNLDGVLEGRYPGIQLIIARDASGRVQGFHRYA 360 LDDQ+QAELAEVLAASPSGARTDRGFCMNLDGVLEGRYPGIQLIIARDASGRVQGFHRYA Sbjct 301 LDDQQQAELAEVLAASPSGARTDRGFCMNLDGVLEGRYPGIQLIIARDASGRVQGFHRYA 360 Query 361 TAGGGSDMSLDVPWRRRGAPNGIDERLSADMIAAAKDAGVQRLSLAFAAFPDLFGANQLG 420 TAGGGSDMSLDVPWRRRGAPNGIDERLSADMIAAAKDAGVQRLSLAFAAFPDLFGANQLG Sbjct 361 TAGGGSDMSLDVPWRRRGAPNGIDERLSADMIAAAKDAGVQRLSLAFAAFPDLFGANQLG 420 Query 421 RLQRVCRALIHILDPLIALESLYRYLRKFHALDERRYVLISMTQVFALALVLLSLEFVPR 480 RLQRVCRALIHILDPLIALESLYRYLRKFHALDERRYVLISMTQVFALALVLLSLEFVPR Sbjct 421 RLQRVCRALIHILDPLIALESLYRYLRKFHALDERRYVLISMTQVFALALVLLSLEFVPR 480 Query 481 RRHL 484 RRHL Sbjct 481 RRHL 484 >gi|289554607|ref|ZP_06443817.1| conserved membrane protein [Mycobacterium tuberculosis KZN 605] gi|289439239|gb|EFD21732.1| conserved membrane protein [Mycobacterium tuberculosis KZN 605] Length=483 Score = 967 bits (2499), Expect = 0.0, Method: Compositional matrix adjust. Identities = 482/483 (99%), Positives = 483/483 (100%), Gaps = 0/483 (0%) Query 2 VAAAGEPLNCQRANPEVTVKLPSADVVPRLRGRQRVVVHVDSRTARCVGALALVCAACWL 61 +AAAGEPLNCQRANPEVTVKLPSADVVPRLRGRQRVVVHVDSRTARCVGALALVCAACWL Sbjct 1 MAAAGEPLNCQRANPEVTVKLPSADVVPRLRGRQRVVVHVDSRTARCVGALALVCAACWL 60 Query 62 IALLAGDYRHAQWAVAGRLGWSLTVLAAVAFIARGIFLGRPVTAMHATAAGLFLLAGLAA 121 IALLAGDYRHAQWAVAGRLGWSLTVLAAVAFIARGIFLGRPVTAMHATAAGLFLLAGLAA Sbjct 61 IALLAGDYRHAQWAVAGRLGWSLTVLAAVAFIARGIFLGRPVTAMHATAAGLFLLAGLAA 120 Query 122 HVLVADLLGEILIAGSGWALMWPTSAHPRPEDLPRVWALINATRADSLAPFAMQAGKSHH 181 HVLVADLLGEILIAGSGWALMWPTSAHPRPEDLPRVWALINATRADSLAPFAMQAGKSHH Sbjct 121 HVLVADLLGEILIAGSGWALMWPTSAHPRPEDLPRVWALINATRADSLAPFAMQAGKSHH 180 Query 182 FSAAGTAALAYRTRIGYAVVSGDPIGDEAQFPQLVADFAAMCHMHGWRIVVVGCSERRLG 241 FSAAGTAALAYRTRIGYAVVSGDPIGDEAQFPQLVADFAAMCHMHGWRIVVVGCSERRLG Sbjct 181 FSAAGTAALAYRTRIGYAVVSGDPIGDEAQFPQLVADFAAMCHMHGWRIVVVGCSERRLG 240 Query 242 LWSDPMVVGQSLRPIPIGRDVVIDVSNFEMTGRRFRNLRQAVKRTHNFGVTTEIVAEQQL 301 LWSDPMVVGQSLRPIPIGRDVVIDVSNFEMTGRRFRNLRQAVKRTHNFGVTTEIVAEQQL Sbjct 241 LWSDPMVVGQSLRPIPIGRDVVIDVSNFEMTGRRFRNLRQAVKRTHNFGVTTEIVAEQQL 300 Query 302 DDQRQAELAEVLAASPSGARTDRGFCMNLDGVLEGRYPGIQLIIARDASGRVQGFHRYAT 361 DDQRQAELAEVLAASPSGARTDRGFCMNLDGVLEGRYPGIQLIIARDASGRVQGFHRYAT Sbjct 301 DDQRQAELAEVLAASPSGARTDRGFCMNLDGVLEGRYPGIQLIIARDASGRVQGFHRYAT 360 Query 362 AGGGSDMSLDVPWRRRGAPNGIDERLSADMIAAAKDAGVQRLSLAFAAFPDLFGANQLGR 421 AGGGSDMSLDVPWRRRGAPNGIDERLSADMIAAAKDAGVQRLSLAFAAFPDLFGANQLGR Sbjct 361 AGGGSDMSLDVPWRRRGAPNGIDERLSADMIAAAKDAGVQRLSLAFAAFPDLFGANQLGR 420 Query 422 LQRVCRALIHILDPLIALESLYRYLRKFHALDERRYVLISMTQVFALALVLLSLEFVPRR 481 LQRVCRALIHILDPLIALESLYRYLRKFHALDERRYVLISMTQVFALALVLLSLEFVPRR Sbjct 421 LQRVCRALIHILDPLIALESLYRYLRKFHALDERRYVLISMTQVFALALVLLSLEFVPRR 480 Query 482 RHL 484 RHL Sbjct 481 RHL 483 >gi|289757721|ref|ZP_06517099.1| conserved hypothetical protein [Mycobacterium tuberculosis T85] gi|289713285|gb|EFD77297.1| conserved hypothetical protein [Mycobacterium tuberculosis T85] Length=486 Score = 960 bits (2481), Expect = 0.0, Method: Compositional matrix adjust. Identities = 478/478 (100%), Positives = 478/478 (100%), Gaps = 0/478 (0%) Query 7 EPLNCQRANPEVTVKLPSADVVPRLRGRQRVVVHVDSRTARCVGALALVCAACWLIALLA 66 EPLNCQRANPEVTVKLPSADVVPRLRGRQRVVVHVDSRTARCVGALALVCAACWLIALLA Sbjct 9 EPLNCQRANPEVTVKLPSADVVPRLRGRQRVVVHVDSRTARCVGALALVCAACWLIALLA 68 Query 67 GDYRHAQWAVAGRLGWSLTVLAAVAFIARGIFLGRPVTAMHATAAGLFLLAGLAAHVLVA 126 GDYRHAQWAVAGRLGWSLTVLAAVAFIARGIFLGRPVTAMHATAAGLFLLAGLAAHVLVA Sbjct 69 GDYRHAQWAVAGRLGWSLTVLAAVAFIARGIFLGRPVTAMHATAAGLFLLAGLAAHVLVA 128 Query 127 DLLGEILIAGSGWALMWPTSAHPRPEDLPRVWALINATRADSLAPFAMQAGKSHHFSAAG 186 DLLGEILIAGSGWALMWPTSAHPRPEDLPRVWALINATRADSLAPFAMQAGKSHHFSAAG Sbjct 129 DLLGEILIAGSGWALMWPTSAHPRPEDLPRVWALINATRADSLAPFAMQAGKSHHFSAAG 188 Query 187 TAALAYRTRIGYAVVSGDPIGDEAQFPQLVADFAAMCHMHGWRIVVVGCSERRLGLWSDP 246 TAALAYRTRIGYAVVSGDPIGDEAQFPQLVADFAAMCHMHGWRIVVVGCSERRLGLWSDP Sbjct 189 TAALAYRTRIGYAVVSGDPIGDEAQFPQLVADFAAMCHMHGWRIVVVGCSERRLGLWSDP 248 Query 247 MVVGQSLRPIPIGRDVVIDVSNFEMTGRRFRNLRQAVKRTHNFGVTTEIVAEQQLDDQRQ 306 MVVGQSLRPIPIGRDVVIDVSNFEMTGRRFRNLRQAVKRTHNFGVTTEIVAEQQLDDQRQ Sbjct 249 MVVGQSLRPIPIGRDVVIDVSNFEMTGRRFRNLRQAVKRTHNFGVTTEIVAEQQLDDQRQ 308 Query 307 AELAEVLAASPSGARTDRGFCMNLDGVLEGRYPGIQLIIARDASGRVQGFHRYATAGGGS 366 AELAEVLAASPSGARTDRGFCMNLDGVLEGRYPGIQLIIARDASGRVQGFHRYATAGGGS Sbjct 309 AELAEVLAASPSGARTDRGFCMNLDGVLEGRYPGIQLIIARDASGRVQGFHRYATAGGGS 368 Query 367 DMSLDVPWRRRGAPNGIDERLSADMIAAAKDAGVQRLSLAFAAFPDLFGANQLGRLQRVC 426 DMSLDVPWRRRGAPNGIDERLSADMIAAAKDAGVQRLSLAFAAFPDLFGANQLGRLQRVC Sbjct 369 DMSLDVPWRRRGAPNGIDERLSADMIAAAKDAGVQRLSLAFAAFPDLFGANQLGRLQRVC 428 Query 427 RALIHILDPLIALESLYRYLRKFHALDERRYVLISMTQVFALALVLLSLEFVPRRRHL 484 RALIHILDPLIALESLYRYLRKFHALDERRYVLISMTQVFALALVLLSLEFVPRRRHL Sbjct 429 RALIHILDPLIALESLYRYLRKFHALDERRYVLISMTQVFALALVLLSLEFVPRRRHL 486 >gi|308400908|ref|ZP_07493312.2| conserved membrane protein [Mycobacterium tuberculosis SUMu012] gi|308366208|gb|EFP55059.1| conserved membrane protein [Mycobacterium tuberculosis SUMu012] Length=465 Score = 930 bits (2403), Expect = 0.0, Method: Compositional matrix adjust. Identities = 464/465 (99%), Positives = 465/465 (100%), Gaps = 0/465 (0%) Query 20 VKLPSADVVPRLRGRQRVVVHVDSRTARCVGALALVCAACWLIALLAGDYRHAQWAVAGR 79 +KLPSADVVPRLRGRQRVVVHVDSRTARCVGALALVCAACWLIALLAGDYRHAQWAVAGR Sbjct 1 MKLPSADVVPRLRGRQRVVVHVDSRTARCVGALALVCAACWLIALLAGDYRHAQWAVAGR 60 Query 80 LGWSLTVLAAVAFIARGIFLGRPVTAMHATAAGLFLLAGLAAHVLVADLLGEILIAGSGW 139 LGWSLTVLAAVAFIARGIFLGRPVTAMHATAAGLFLLAGLAAHVLVADLLGEILIAGSGW Sbjct 61 LGWSLTVLAAVAFIARGIFLGRPVTAMHATAAGLFLLAGLAAHVLVADLLGEILIAGSGW 120 Query 140 ALMWPTSAHPRPEDLPRVWALINATRADSLAPFAMQAGKSHHFSAAGTAALAYRTRIGYA 199 ALMWPTSAHPRPEDLPRVWALINATRADSLAPFAMQAGKSHHFSAAGTAALAYRTRIGYA Sbjct 121 ALMWPTSAHPRPEDLPRVWALINATRADSLAPFAMQAGKSHHFSAAGTAALAYRTRIGYA 180 Query 200 VVSGDPIGDEAQFPQLVADFAAMCHMHGWRIVVVGCSERRLGLWSDPMVVGQSLRPIPIG 259 VVSGDPIGDEAQFPQLVADFAAMCHMHGWRIVVVGCSERRLGLWSDPMVVGQSLRPIPIG Sbjct 181 VVSGDPIGDEAQFPQLVADFAAMCHMHGWRIVVVGCSERRLGLWSDPMVVGQSLRPIPIG 240 Query 260 RDVVIDVSNFEMTGRRFRNLRQAVKRTHNFGVTTEIVAEQQLDDQRQAELAEVLAASPSG 319 RDVVIDVSNFEMTGRRFRNLRQAVKRTHNFGVTTEIVAEQQLDDQRQAELAEVLAASPSG Sbjct 241 RDVVIDVSNFEMTGRRFRNLRQAVKRTHNFGVTTEIVAEQQLDDQRQAELAEVLAASPSG 300 Query 320 ARTDRGFCMNLDGVLEGRYPGIQLIIARDASGRVQGFHRYATAGGGSDMSLDVPWRRRGA 379 ARTDRGFCMNLDGVLEGRYPGIQLIIARDASGRVQGFHRYATAGGGSDMSLDVPWRRRGA Sbjct 301 ARTDRGFCMNLDGVLEGRYPGIQLIIARDASGRVQGFHRYATAGGGSDMSLDVPWRRRGA 360 Query 380 PNGIDERLSADMIAAAKDAGVQRLSLAFAAFPDLFGANQLGRLQRVCRALIHILDPLIAL 439 PNGIDERLSADMIAAAKDAGVQRLSLAFAAFPDLFGANQLGRLQRVCRALIHILDPLIAL Sbjct 361 PNGIDERLSADMIAAAKDAGVQRLSLAFAAFPDLFGANQLGRLQRVCRALIHILDPLIAL 420 Query 440 ESLYRYLRKFHALDERRYVLISMTQVFALALVLLSLEFVPRRRHL 484 ESLYRYLRKFHALDERRYVLISMTQVFALALVLLSLEFVPRRRHL Sbjct 421 ESLYRYLRKFHALDERRYVLISMTQVFALALVLLSLEFVPRRRHL 465 >gi|183982436|ref|YP_001850727.1| hypothetical protein MMAR_2422 [Mycobacterium marinum M] gi|183175762|gb|ACC40872.1| conserved hypothetical membrane protein [Mycobacterium marinum M] Length=468 Score = 691 bits (1783), Expect = 0.0, Method: Compositional matrix adjust. Identities = 342/443 (78%), Positives = 376/443 (85%), Gaps = 0/443 (0%) Query 42 DSRTARCVGALALVCAACWLIALLAGDYRHAQWAVAGRLGWSLTVLAAVAFIARGIFLGR 101 DS TARCVGALA+ CAACWLIALLA +YRH W AGRL WSLTVLAAVA IARGIFLGR Sbjct 25 DSVTARCVGALAVFCAACWLIALLARNYRHEDWQAAGRLSWSLTVLAAVALIARGIFLGR 84 Query 102 PVTAMHATAAGLFLLAGLAAHVLVADLLGEILIAGSGWALMWPTSAHPRPEDLPRVWALI 161 PVTAMHA A L L+ GL AHVL L GE+LIAGSG LMWPTSAHPRPE+LPRVWALI Sbjct 85 PVTAMHAIVAALILVLGLGAHVLSFSLAGELLIAGSGLVLMWPTSAHPRPEELPRVWALI 144 Query 162 NATRADSLAPFAMQAGKSHHFSAAGTAALAYRTRIGYAVVSGDPIGDEAQFPQLVADFAA 221 NAT AD LAPFAMQAGK +HF+AAGTAALAYRTR+G+AVV+GDPIG E+QFPQL+ADFAA Sbjct 145 NATSADPLAPFAMQAGKCYHFNAAGTAALAYRTRMGFAVVAGDPIGAESQFPQLIADFAA 204 Query 222 MCHMHGWRIVVVGCSERRLGLWSDPMVVGQSLRPIPIGRDVVIDVSNFEMTGRRFRNLRQ 281 MCH HGWRI V+ CSERRL LW+D VVGQSLR +PIG DVVIDV +F M GR+FRNLRQ Sbjct 205 MCHTHGWRIAVLACSERRLDLWADRAVVGQSLRAVPIGCDVVIDVRSFAMVGRKFRNLRQ 264 Query 282 AVKRTHNFGVTTEIVAEQQLDDQRQAELAEVLAASPSGARTDRGFCMNLDGVLEGRYPGI 341 AVKRT N G+TTEIVAEQ+LDD R+AELAE+L ASP GAR DRGFCM+LDGVLEG YPG+ Sbjct 265 AVKRTRNAGITTEIVAEQELDDTRRAELAEMLLASPKGARNDRGFCMSLDGVLEGTYPGV 324 Query 342 QLIIARDASGRVQGFHRYATAGGGSDMSLDVPWRRRGAPNGIDERLSADMIAAAKDAGVQ 401 QLIIARD SGRVQGF R+ TAG GSD SLDVPWRR GAPNGIDERLS DMI AAKDAG Q Sbjct 325 QLIIARDVSGRVQGFDRFTTAGRGSDYSLDVPWRRSGAPNGIDERLSVDMIIAAKDAGAQ 384 Query 402 RLSLAFAAFPDLFGANQLGRLQRVCRALIHILDPLIALESLYRYLRKFHALDERRYVLIS 461 RLSLAFAAFP++F R QR+ LIH+LDPLI+LESLYRYL KFHALD+RRY LI+ Sbjct 385 RLSLAFAAFPEIFDECHSSRPQRLFYLLIHLLDPLISLESLYRYLCKFHALDQRRYALIT 444 Query 462 MTQVFALALVLLSLEFVPRRRHL 484 +TQV L +VLLSLEF+PRRRHL Sbjct 445 VTQVIPLLVVLLSLEFMPRRRHL 467 >gi|118617244|ref|YP_905576.1| hypothetical protein MUL_1600 [Mycobacterium ulcerans Agy99] gi|118569354|gb|ABL04105.1| conserved hypothetical membrane protein [Mycobacterium ulcerans Agy99] Length=466 Score = 689 bits (1779), Expect = 0.0, Method: Compositional matrix adjust. Identities = 342/443 (78%), Positives = 375/443 (85%), Gaps = 0/443 (0%) Query 42 DSRTARCVGALALVCAACWLIALLAGDYRHAQWAVAGRLGWSLTVLAAVAFIARGIFLGR 101 DS TARCVGALA+ CA CWLIALLA +YRH W AGRL WSLTVLAAVA IARGIFLGR Sbjct 23 DSVTARCVGALAVFCAVCWLIALLARNYRHEDWQAAGRLSWSLTVLAAVALIARGIFLGR 82 Query 102 PVTAMHATAAGLFLLAGLAAHVLVADLLGEILIAGSGWALMWPTSAHPRPEDLPRVWALI 161 PVTAMHA A L L+ GL AHVL L GE+LIAGSG LMWPTSAHPRPE+LPRVWALI Sbjct 83 PVTAMHAIVAALILVLGLGAHVLSFSLAGELLIAGSGLVLMWPTSAHPRPEELPRVWALI 142 Query 162 NATRADSLAPFAMQAGKSHHFSAAGTAALAYRTRIGYAVVSGDPIGDEAQFPQLVADFAA 221 NAT AD LAPFAMQAGK +HF+AAGTAALAYRTR+G+AVV+GDPIG E+QFPQL+ADFAA Sbjct 143 NATSADPLAPFAMQAGKCYHFNAAGTAALAYRTRMGFAVVAGDPIGAESQFPQLIADFAA 202 Query 222 MCHMHGWRIVVVGCSERRLGLWSDPMVVGQSLRPIPIGRDVVIDVSNFEMTGRRFRNLRQ 281 MCH HGWRI V+ CSERRL LW+D VVGQSLR +PIG DVVIDV +F M GRRFRNLRQ Sbjct 203 MCHTHGWRIAVLACSERRLDLWADRAVVGQSLRAVPIGCDVVIDVRSFAMVGRRFRNLRQ 262 Query 282 AVKRTHNFGVTTEIVAEQQLDDQRQAELAEVLAASPSGARTDRGFCMNLDGVLEGRYPGI 341 AVKRT N G+TTEIVAEQ+LDD R+AELAE+L ASP GAR DRGFCM+LDGVLEG YPG+ Sbjct 263 AVKRTRNAGITTEIVAEQELDDTRRAELAEMLLASPKGARNDRGFCMSLDGVLEGTYPGV 322 Query 342 QLIIARDASGRVQGFHRYATAGGGSDMSLDVPWRRRGAPNGIDERLSADMIAAAKDAGVQ 401 QLIIARD SGRVQGF R+ TAG GSD SLDVPWRR GAPNGIDERLS DMI AAKDAG Q Sbjct 323 QLIIARDVSGRVQGFDRFTTAGRGSDYSLDVPWRRSGAPNGIDERLSVDMIIAAKDAGAQ 382 Query 402 RLSLAFAAFPDLFGANQLGRLQRVCRALIHILDPLIALESLYRYLRKFHALDERRYVLIS 461 RLSLAFAAFP++F R QR+ LIH+LDPLI+LESLYRYL KFHALD+RRY LI+ Sbjct 383 RLSLAFAAFPEIFDECHRSRPQRLFYLLIHLLDPLISLESLYRYLCKFHALDQRRYALIT 442 Query 462 MTQVFALALVLLSLEFVPRRRHL 484 +TQV L +VLLSLEF+PRRRHL Sbjct 443 VTQVIPLLVVLLSLEFMPRRRHL 465 >gi|41407410|ref|NP_960246.1| hypothetical protein MAP1312 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395762|gb|AAS03629.1| hypothetical protein MAP_1312 [Mycobacterium avium subsp. paratuberculosis K-10] Length=483 Score = 667 bits (1722), Expect = 0.0, Method: Compositional matrix adjust. Identities = 334/471 (71%), Positives = 379/471 (81%), Gaps = 0/471 (0%) Query 14 ANPEVTVKLPSADVVPRLRGRQRVVVHVDSRTARCVGALALVCAACWLIALLAGDYRHAQ 73 A+ EV V P DV + R +RVVV DSR AR +GALAL CAACWLI +L + + Sbjct 13 AHREVRVNGPVVDVATKPRAGERVVVSADSRAARLIGALALFCAACWLIQILVHHHSNPS 72 Query 74 WAVAGRLGWSLTVLAAVAFIARGIFLGRPVTAMHATAAGLFLLAGLAAHVLVADLLGEIL 133 W A RL WSLTVL AVA+IARGIFLGRPVT MHA A F+LAGL HVL DLLG++L Sbjct 73 WHYADRLAWSLTVLVAVAWIARGIFLGRPVTTMHAAVAAFFVLAGLGLHVLSFDLLGDVL 132 Query 134 IAGSGWALMWPTSAHPRPEDLPRVWALINATRADSLAPFAMQAGKSHHFSAAGTAALAYR 193 IAGSG LMWPTS+HPRP DLPR+W LINATR D+LAPF MQ GKS+HFSA G+AALAYR Sbjct 133 IAGSGMVLMWPTSSHPRPADLPRIWELINATRDDALAPFTMQTGKSYHFSADGSAALAYR 192 Query 194 TRIGYAVVSGDPIGDEAQFPQLVADFAAMCHMHGWRIVVVGCSERRLGLWSDPMVVGQSL 253 TR+G AVVSGDPIGDEA FP+LVADFA CH HGWRI VVGCSERRL LW D V+GQ+L Sbjct 193 TRLGIAVVSGDPIGDEAHFPELVADFAVTCHAHGWRIAVVGCSERRLELWKDSAVLGQTL 252 Query 254 RPIPIGRDVVIDVSNFEMTGRRFRNLRQAVKRTHNFGVTTEIVAEQQLDDQRQAELAEVL 313 RPIPIGRDVV+DVS+F+M GR+FRNLRQAVKRTHN GVTTEIVAEQ+L D+ AEL EV+ Sbjct 253 RPIPIGRDVVVDVSSFDMVGRKFRNLRQAVKRTHNCGVTTEIVAEQELSDELLAELTEVV 312 Query 314 AASPSGARTDRGFCMNLDGVLEGRYPGIQLIIARDASGRVQGFHRYATAGGGSDMSLDVP 373 S GA DRGF MNLDGVLEGR+PGI LIIARDA+G+VQ FHRYATAGGGSD++LDVP Sbjct 313 RESSKGAHADRGFHMNLDGVLEGRFPGILLIIARDATGKVQAFHRYATAGGGSDITLDVP 372 Query 374 WRRRGAPNGIDERLSADMIAAAKDAGVQRLSLAFAAFPDLFGANQLGRLQRVCRALIHIL 433 WRRRGAPNG+DERLS DM+ A KD G QR+SLAFAAFP++F G +R+ L H+L Sbjct 373 WRRRGAPNGLDERLSVDMVMAGKDRGAQRVSLAFAAFPEIFEDKNRGWTRRIFYRLTHVL 432 Query 434 DPLIALESLYRYLRKFHALDERRYVLISMTQVFALALVLLSLEFVPRRRHL 484 DPLIALESLYRY+RK+HALD RRY +ISMTQ+ L VLLSLEF+PRRRHL Sbjct 433 DPLIALESLYRYVRKWHALDGRRYAVISMTQIVPLLFVLLSLEFLPRRRHL 483 >gi|254820969|ref|ZP_05225970.1| hypothetical protein MintA_13625 [Mycobacterium intracellulare ATCC 13950] Length=452 Score = 667 bits (1720), Expect = 0.0, Method: Compositional matrix adjust. Identities = 327/451 (73%), Positives = 369/451 (82%), Gaps = 0/451 (0%) Query 34 RQRVVVHVDSRTARCVGALALVCAACWLIALLAGDYRHAQWAVAGRLGWSLTVLAAVAFI 93 R+RVVV DSR AR +GALAL+CAACWLI +LA + W A RL WSLTVL AVA+I Sbjct 2 RERVVVSADSRAARLIGALALLCAACWLIEILARHHSQPNWHFADRLAWSLTVLVAVAWI 61 Query 94 ARGIFLGRPVTAMHATAAGLFLLAGLAAHVLVADLLGEILIAGSGWALMWPTSAHPRPED 153 ARG+FLGRPVT MHA AA F+LAGL HVL DLLG+++IA SG LMWP ++HPRP D Sbjct 62 ARGVFLGRPVTTMHAIAAAFFVLAGLGMHVLSFDLLGDVVIASSGLVLMWPMTSHPRPAD 121 Query 154 LPRVWALINATRADSLAPFAMQAGKSHHFSAAGTAALAYRTRIGYAVVSGDPIGDEAQFP 213 LPRVW LI TR D+LAPF MQ GKS+HF+A G+AALAYRTR+G AVVSGDPIGDE +F Sbjct 122 LPRVWELIKVTRDDALAPFTMQTGKSYHFTADGSAALAYRTRMGIAVVSGDPIGDEKRFG 181 Query 214 QLVADFAAMCHMHGWRIVVVGCSERRLGLWSDPMVVGQSLRPIPIGRDVVIDVSNFEMTG 273 +LVADFAA CH HGWRI VVGC ERR LW+DP ++GQ+LR IPIGRDVV+DVS F+M G Sbjct 182 ELVADFAATCHAHGWRIAVVGCGERRRELWTDPAILGQTLRAIPIGRDVVVDVSGFDMVG 241 Query 274 RRFRNLRQAVKRTHNFGVTTEIVAEQQLDDQRQAELAEVLAASPSGARTDRGFCMNLDGV 333 RRFRNLRQAVKRTHN GVTTEIVAEQ+LD AEL EV+ S GAR DRGF MNLDGV Sbjct 242 RRFRNLRQAVKRTHNCGVTTEIVAEQELDHTLLAELTEVVRESSKGARADRGFHMNLDGV 301 Query 334 LEGRYPGIQLIIARDASGRVQGFHRYATAGGGSDMSLDVPWRRRGAPNGIDERLSADMIA 393 LEGR+PGIQLIIARDA+G+VQ FHRYATAGGGSD++LDVPWRRRGAPNG+DERLS DMI Sbjct 302 LEGRFPGIQLIIARDATGKVQAFHRYATAGGGSDITLDVPWRRRGAPNGLDERLSVDMIM 361 Query 394 AAKDAGVQRLSLAFAAFPDLFGANQLGRLQRVCRALIHILDPLIALESLYRYLRKFHALD 453 A KD+G QR+SLAFAAFP++F G QRV LIHILDPLIALESLYRY+RK+HALD Sbjct 362 AGKDSGAQRVSLAFAAFPEIFDDKNRGWTQRVFYRLIHILDPLIALESLYRYVRKWHALD 421 Query 454 ERRYVLISMTQVFALALVLLSLEFVPRRRHL 484 RRY LISMTQ+ L VLLSLEF+PRRRHL Sbjct 422 ARRYALISMTQIVPLLFVLLSLEFMPRRRHL 452 >gi|118463474|ref|YP_882351.1| hypothetical protein MAV_3168 [Mycobacterium avium 104] gi|118164761|gb|ABK65658.1| conserved hypothetical protein [Mycobacterium avium 104] Length=465 Score = 665 bits (1717), Expect = 0.0, Method: Compositional matrix adjust. Identities = 331/462 (72%), Positives = 375/462 (82%), Gaps = 0/462 (0%) Query 23 PSADVVPRLRGRQRVVVHVDSRTARCVGALALVCAACWLIALLAGDYRHAQWAVAGRLGW 82 P DV P+ R +RVVV DSR AR +GAL L CAACWLI +L + + W A RL W Sbjct 4 PVVDVAPKPRAGERVVVSADSRAARLIGALGLFCAACWLIQILVHHHSNPSWHYADRLAW 63 Query 83 SLTVLAAVAFIARGIFLGRPVTAMHATAAGLFLLAGLAAHVLVADLLGEILIAGSGWALM 142 SLTVL AVA+IARGIFLGRPVT MHA A F+LAGL HVL DLLG++LIAGSG LM Sbjct 64 SLTVLVAVAWIARGIFLGRPVTTMHAAVAAFFVLAGLGLHVLSFDLLGDVLIAGSGMVLM 123 Query 143 WPTSAHPRPEDLPRVWALINATRADSLAPFAMQAGKSHHFSAAGTAALAYRTRIGYAVVS 202 WPTS+HPRP DLPR+W LINATR D+LAPF MQ GKS+HFSA G+AALAYRTR+G AVVS Sbjct 124 WPTSSHPRPADLPRIWELINATRDDALAPFTMQTGKSYHFSADGSAALAYRTRLGIAVVS 183 Query 203 GDPIGDEAQFPQLVADFAAMCHMHGWRIVVVGCSERRLGLWSDPMVVGQSLRPIPIGRDV 262 GDPIGDEA FP+LVADFAA CH HGWRI VVGCSERRL LW D V+GQ+LRPIPIGRDV Sbjct 184 GDPIGDEAHFPELVADFAATCHAHGWRIAVVGCSERRLELWKDSAVLGQTLRPIPIGRDV 243 Query 263 VIDVSNFEMTGRRFRNLRQAVKRTHNFGVTTEIVAEQQLDDQRQAELAEVLAASPSGART 322 V+DVS+F+M GR+FRNLRQAVKRTHN GVTTEIVAEQ+L D+ AEL EV+ S GA Sbjct 244 VVDVSSFDMVGRKFRNLRQAVKRTHNCGVTTEIVAEQELSDELLAELTEVVRESSKGAHA 303 Query 323 DRGFCMNLDGVLEGRYPGIQLIIARDASGRVQGFHRYATAGGGSDMSLDVPWRRRGAPNG 382 DRGF MNLDGVLEGR+PGI LIIARDA+G+VQ FHRYATAGGGSD++LDVPWRRRGAPNG Sbjct 304 DRGFHMNLDGVLEGRFPGILLIIARDATGKVQAFHRYATAGGGSDITLDVPWRRRGAPNG 363 Query 383 IDERLSADMIAAAKDAGVQRLSLAFAAFPDLFGANQLGRLQRVCRALIHILDPLIALESL 442 +DERLS DM+ A KD G QR+SLAFAAFP++F G +R+ L H+LDPLIALESL Sbjct 364 LDERLSVDMVMAGKDRGAQRVSLAFAAFPEIFEDKNRGWTRRIFYRLTHVLDPLIALESL 423 Query 443 YRYLRKFHALDERRYVLISMTQVFALALVLLSLEFVPRRRHL 484 YRY+RK+HALD RRY +ISMTQ+ L VLLSLEF+PRRRHL Sbjct 424 YRYVRKWHALDGRRYAVISMTQIVPLLFVLLSLEFLPRRRHL 465 >gi|296164485|ref|ZP_06847057.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295900183|gb|EFG79617.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=465 Score = 664 bits (1712), Expect = 0.0, Method: Compositional matrix adjust. Identities = 335/462 (73%), Positives = 383/462 (83%), Gaps = 0/462 (0%) Query 23 PSADVVPRLRGRQRVVVHVDSRTARCVGALALVCAACWLIALLAGDYRHAQWAVAGRLGW 82 P DV + RGR+RVVV VDSR AR +GALALV A CWL ++A + +W RL W Sbjct 4 PLVDVSAKARGRERVVVSVDSRAARLIGALALVSATCWLGEIVARHHDQPEWHYTDRLAW 63 Query 83 SLTVLAAVAFIARGIFLGRPVTAMHATAAGLFLLAGLAAHVLVADLLGEILIAGSGWALM 142 SLTVL AVA+IARGIFLGRPVTA+HA AA F+LAGL H+L DLLG+++IA SG LM Sbjct 64 SLTVLVAVAWIARGIFLGRPVTALHAAAAASFVLAGLGLHLLSFDLLGDLVIASSGMVLM 123 Query 143 WPTSAHPRPEDLPRVWALINATRADSLAPFAMQAGKSHHFSAAGTAALAYRTRIGYAVVS 202 WPT++HPRP DLPRVWALI ATR D LAPFAMQ GKS+HF+A G+AALAYRTR+G AVVS Sbjct 124 WPTTSHPRPGDLPRVWALIQATRDDPLAPFAMQTGKSYHFTADGSAALAYRTRLGIAVVS 183 Query 203 GDPIGDEAQFPQLVADFAAMCHMHGWRIVVVGCSERRLGLWSDPMVVGQSLRPIPIGRDV 262 GDP+GDEA+FP+LVADFAAMCH HGWRI VVGC ERRL LWSD V+GQSLR +PIGRDV Sbjct 184 GDPLGDEARFPELVADFAAMCHTHGWRIAVVGCGERRLDLWSDATVIGQSLRAVPIGRDV 243 Query 263 VIDVSNFEMTGRRFRNLRQAVKRTHNFGVTTEIVAEQQLDDQRQAELAEVLAASPSGART 322 V+DV+ F+M GR+FRNLRQAVKR+HN GVTTEIVAEQ+L +++ AEL EV+ AS GAR+ Sbjct 244 VVDVTGFDMVGRKFRNLRQAVKRSHNCGVTTEIVAEQELTNEQLAELTEVVRASSKGARS 303 Query 323 DRGFCMNLDGVLEGRYPGIQLIIARDASGRVQGFHRYATAGGGSDMSLDVPWRRRGAPNG 382 DRGF MNLDGVLEGR+PGIQLI+ARD SG+VQGFHRYATAGGGSD++LDVPWRRRGAPNG Sbjct 304 DRGFHMNLDGVLEGRFPGIQLIVARDTSGKVQGFHRYATAGGGSDITLDVPWRRRGAPNG 363 Query 383 IDERLSADMIAAAKDAGVQRLSLAFAAFPDLFGANQLGRLQRVCRALIHILDPLIALESL 442 IDERLS DMI A K G QRLSLAFAAFP++F R QRV LIH+LDPLIALESL Sbjct 364 IDERLSVDMIMAGKGNGAQRLSLAFAAFPEIFDEKNRNRAQRVFYRLIHVLDPLIALESL 423 Query 443 YRYLRKFHALDERRYVLISMTQVFALALVLLSLEFVPRRRHL 484 YRY+RKFHALD RRY LISMTQ+ L +VLLSLEF+PRRRHL Sbjct 424 YRYVRKFHALDARRYALISMTQLVQLLIVLLSLEFMPRRRHL 465 >gi|336457898|gb|EGO36891.1| hypothetical protein MAPs_18600 [Mycobacterium avium subsp. paratuberculosis S397] Length=465 Score = 662 bits (1709), Expect = 0.0, Method: Compositional matrix adjust. Identities = 330/462 (72%), Positives = 374/462 (81%), Gaps = 0/462 (0%) Query 23 PSADVVPRLRGRQRVVVHVDSRTARCVGALALVCAACWLIALLAGDYRHAQWAVAGRLGW 82 P DV + R +RVVV DSR AR +GALAL CAACWLI +L + + W A RL W Sbjct 4 PVVDVATKPRAGERVVVSADSRAARLIGALALFCAACWLIQILVHHHSNPSWHYADRLAW 63 Query 83 SLTVLAAVAFIARGIFLGRPVTAMHATAAGLFLLAGLAAHVLVADLLGEILIAGSGWALM 142 SLTVL AVA+IARGIFLGRPVT MHA A F+LAGL HVL DLLG++LIAGSG LM Sbjct 64 SLTVLVAVAWIARGIFLGRPVTTMHAAVAAFFVLAGLGLHVLSFDLLGDVLIAGSGMVLM 123 Query 143 WPTSAHPRPEDLPRVWALINATRADSLAPFAMQAGKSHHFSAAGTAALAYRTRIGYAVVS 202 WPTS+HPRP DLPR+W LINATR D+LAPF MQ GKS+HFSA G+AALAYRTR+G AVVS Sbjct 124 WPTSSHPRPADLPRIWELINATRDDALAPFTMQTGKSYHFSADGSAALAYRTRLGIAVVS 183 Query 203 GDPIGDEAQFPQLVADFAAMCHMHGWRIVVVGCSERRLGLWSDPMVVGQSLRPIPIGRDV 262 GDPIGDEA FP+LVADFA CH HGWRI VVGCSERRL LW D V+GQ+LRPIPIGRDV Sbjct 184 GDPIGDEAHFPELVADFAVTCHAHGWRIAVVGCSERRLELWKDSAVLGQTLRPIPIGRDV 243 Query 263 VIDVSNFEMTGRRFRNLRQAVKRTHNFGVTTEIVAEQQLDDQRQAELAEVLAASPSGART 322 V+DVS+F+M GR+FRNLRQAVKRTHN GVTTEIVAEQ+L D+ AEL EV+ S GA Sbjct 244 VVDVSSFDMVGRKFRNLRQAVKRTHNCGVTTEIVAEQELSDELLAELTEVVRESSKGAHA 303 Query 323 DRGFCMNLDGVLEGRYPGIQLIIARDASGRVQGFHRYATAGGGSDMSLDVPWRRRGAPNG 382 DRGF MNLDGVLEGR+PGI LIIARDA+G+VQ FHRYATAGGGSD++LDVPWRRRGAPNG Sbjct 304 DRGFHMNLDGVLEGRFPGILLIIARDATGKVQAFHRYATAGGGSDITLDVPWRRRGAPNG 363 Query 383 IDERLSADMIAAAKDAGVQRLSLAFAAFPDLFGANQLGRLQRVCRALIHILDPLIALESL 442 +DERLS DM+ A KD G QR+SLAFAAFP++F G +R+ L H+LDPLIALESL Sbjct 364 LDERLSVDMVMAGKDRGAQRVSLAFAAFPEIFEDKNRGWTRRIFYRLTHVLDPLIALESL 423 Query 443 YRYLRKFHALDERRYVLISMTQVFALALVLLSLEFVPRRRHL 484 YRY+RK+HALD RRY +ISMTQ+ L VLLSLEF+PRRRHL Sbjct 424 YRYVRKWHALDGRRYAVISMTQIVPLLFVLLSLEFLPRRRHL 465 >gi|254775615|ref|ZP_05217131.1| hypothetical protein MaviaA2_13233 [Mycobacterium avium subsp. avium ATCC 25291] Length=465 Score = 662 bits (1707), Expect = 0.0, Method: Compositional matrix adjust. Identities = 330/462 (72%), Positives = 374/462 (81%), Gaps = 0/462 (0%) Query 23 PSADVVPRLRGRQRVVVHVDSRTARCVGALALVCAACWLIALLAGDYRHAQWAVAGRLGW 82 P DV + R +RVVV DSR AR +GALAL CAACWLI +L + + W A RL W Sbjct 4 PVVDVATKPRAGERVVVSADSRAARLIGALALFCAACWLIQILVHHHSNPSWHYADRLAW 63 Query 83 SLTVLAAVAFIARGIFLGRPVTAMHATAAGLFLLAGLAAHVLVADLLGEILIAGSGWALM 142 SLTVL AVA+IARGIFLGRPVT MHA A F+LAGL HVL DLLG++LIAGSG LM Sbjct 64 SLTVLVAVAWIARGIFLGRPVTTMHAAVAAFFVLAGLGLHVLSFDLLGDVLIAGSGMVLM 123 Query 143 WPTSAHPRPEDLPRVWALINATRADSLAPFAMQAGKSHHFSAAGTAALAYRTRIGYAVVS 202 WPTS+HPRP DLPR+W LINATR D+LAPF MQ GKS+HFSA G+AALAYRTR+G AVVS Sbjct 124 WPTSSHPRPADLPRIWELINATRDDALAPFTMQTGKSYHFSADGSAALAYRTRLGIAVVS 183 Query 203 GDPIGDEAQFPQLVADFAAMCHMHGWRIVVVGCSERRLGLWSDPMVVGQSLRPIPIGRDV 262 GDPIGDEA FP+LVADFAA CH HGWRI VVGCSERRL LW D V+GQ+LRPIPIGRDV Sbjct 184 GDPIGDEAHFPELVADFAAACHAHGWRIAVVGCSERRLELWKDSAVLGQTLRPIPIGRDV 243 Query 263 VIDVSNFEMTGRRFRNLRQAVKRTHNFGVTTEIVAEQQLDDQRQAELAEVLAASPSGART 322 V+DVS+F+M GR+FRNLRQAVKRTHN GVTTEIVAEQ+L D+ AEL EV+ S GA Sbjct 244 VVDVSSFDMVGRKFRNLRQAVKRTHNCGVTTEIVAEQELSDELLAELTEVVRESSKGAHA 303 Query 323 DRGFCMNLDGVLEGRYPGIQLIIARDASGRVQGFHRYATAGGGSDMSLDVPWRRRGAPNG 382 DRGF MNLDGVLEGR+PGI LIIARDA+G+VQ FHRYATAGGGSD++LDVPWRRRGAPNG Sbjct 304 DRGFHMNLDGVLEGRFPGILLIIARDATGKVQAFHRYATAGGGSDITLDVPWRRRGAPNG 363 Query 383 IDERLSADMIAAAKDAGVQRLSLAFAAFPDLFGANQLGRLQRVCRALIHILDPLIALESL 442 +DERLS DM+ KD G QR+SLAFAAFP++F G +R+ L H+LDPLIALESL Sbjct 364 LDERLSVDMVMVDKDRGAQRVSLAFAAFPEIFEDKNRGWTRRIFYRLTHVLDPLIALESL 423 Query 443 YRYLRKFHALDERRYVLISMTQVFALALVLLSLEFVPRRRHL 484 YRY+RK+HALD RRY +ISMTQ+ L VLLSLEF+PRRRHL Sbjct 424 YRYVRKWHALDGRRYAVISMTQIVPLLFVLLSLEFLPRRRHL 465 >gi|240167996|ref|ZP_04746655.1| hypothetical protein MkanA1_01680 [Mycobacterium kansasii ATCC 12478] Length=473 Score = 657 bits (1694), Expect = 0.0, Method: Compositional matrix adjust. Identities = 354/467 (76%), Positives = 397/467 (86%), Gaps = 0/467 (0%) Query 18 VTVKLPSADVVPRLRGRQRVVVHVDSRTARCVGALALVCAACWLIALLAGDYRHAQWAVA 77 ++V PS DV PR+R R+RVVVHVDS AR VGALA+ CAACWLIALLA +YRH W A Sbjct 1 MSVNEPSVDVAPRVRARERVVVHVDSLMARFVGALAVFCAACWLIALLAHNYRHEDWQAA 60 Query 78 GRLGWSLTVLAAVAFIARGIFLGRPVTAMHATAAGLFLLAGLAAHVLVADLLGEILIAGS 137 GRL WSLT+LAAVA IARGIFLGRPVTAMHA AA LFL+AGL HVL DL GE+LIAGS Sbjct 61 GRLSWSLTMLAAVALIARGIFLGRPVTAMHAAAAALFLVAGLGLHVLSFDLAGEMLIAGS 120 Query 138 GWALMWPTSAHPRPEDLPRVWALINATRADSLAPFAMQAGKSHHFSAAGTAALAYRTRIG 197 G LMWPTS+HPRP LPRVWALINAT D LAPFAMQA K +HFSAAGTAALAYRTR+G Sbjct 121 GLVLMWPTSSHPRPGALPRVWALINATSEDPLAPFAMQADKCYHFSAAGTAALAYRTRLG 180 Query 198 YAVVSGDPIGDEAQFPQLVADFAAMCHMHGWRIVVVGCSERRLGLWSDPMVVGQSLRPIP 257 +AVV+GDPIG+E+QFP+LVADFAA+CH GWRI V+ CSERRL LW+DP V G+SLR +P Sbjct 181 FAVVAGDPIGEESQFPELVADFAALCHARGWRIAVLACSERRLSLWTDPAVPGRSLRAVP 240 Query 258 IGRDVVIDVSNFEMTGRRFRNLRQAVKRTHNFGVTTEIVAEQQLDDQRQAELAEVLAASP 317 IGRDVVIDV NF M GR+FRNLRQAVKRTHN G+TTEIVAEQ+LDD ++AEL E+L ASP Sbjct 241 IGRDVVIDVPNFAMVGRKFRNLRQAVKRTHNAGITTEIVAEQELDDNQRAELTEMLLASP 300 Query 318 SGARTDRGFCMNLDGVLEGRYPGIQLIIARDASGRVQGFHRYATAGGGSDMSLDVPWRRR 377 GARTDRGFCM+LDGVLEG+YPG+QLIIARDASG+VQGF R+ TAGGGSD SLDVPWRRR Sbjct 301 KGARTDRGFCMSLDGVLEGKYPGVQLIIARDASGQVQGFDRFTTAGGGSDYSLDVPWRRR 360 Query 378 GAPNGIDERLSADMIAAAKDAGVQRLSLAFAAFPDLFGANQLGRLQRVCRALIHILDPLI 437 GAPNGIDERLS DMI AAK+AG QRLSLAFAAFP++F A R QR+ LIH+LDP I Sbjct 361 GAPNGIDERLSVDMITAAKEAGAQRLSLAFAAFPEIFDAAHRSRPQRLFYLLIHLLDPFI 420 Query 438 ALESLYRYLRKFHALDERRYVLISMTQVFALALVLLSLEFVPRRRHL 484 +LESLYRYL KFHALDERRY L+S+TQ+ L LVLLSLEF+PRRR L Sbjct 421 SLESLYRYLCKFHALDERRYALVSLTQIVPLLLVLLSLEFMPRRRGL 467 >gi|342860811|ref|ZP_08717461.1| hypothetical protein MCOL_18108 [Mycobacterium colombiense CECT 3035] gi|342131835|gb|EGT85092.1| hypothetical protein MCOL_18108 [Mycobacterium colombiense CECT 3035] Length=446 Score = 655 bits (1690), Expect = 0.0, Method: Compositional matrix adjust. Identities = 322/444 (73%), Positives = 362/444 (82%), Gaps = 0/444 (0%) Query 41 VDSRTARCVGALALVCAACWLIALLAGDYRHAQWAVAGRLGWSLTVLAAVAFIARGIFLG 100 VDS AR +GALAL AACWLI +LA + H W RL WSLTVL AVA++ARGIFLG Sbjct 3 VDSLAARLIGALALFGAACWLIEILARHHSHPSWNYTDRLAWSLTVLVAVAWMARGIFLG 62 Query 101 RPVTAMHATAAGLFLLAGLAAHVLVADLLGEILIAGSGWALMWPTSAHPRPEDLPRVWAL 160 RPVT MHA AA F+LAGL HVL DLLG+++IAGSG LMWPT+++PRP DLPRVW L Sbjct 63 RPVTTMHAIAAAFFVLAGLGLHVLSFDLLGDLVIAGSGMVLMWPTTSYPRPGDLPRVWQL 122 Query 161 INATRADSLAPFAMQAGKSHHFSAAGTAALAYRTRIGYAVVSGDPIGDEAQFPQLVADFA 220 I+AT D+LAPF MQ GKS+HF+A GTAALAYRTR+G AVVSGDPIGDEAQFP+LVADFA Sbjct 123 IDATAGDALAPFTMQTGKSYHFTADGTAALAYRTRMGIAVVSGDPIGDEAQFPELVADFA 182 Query 221 AMCHMHGWRIVVVGCSERRLGLWSDPMVVGQSLRPIPIGRDVVIDVSNFEMTGRRFRNLR 280 A CH HGWRI VVGC ERRLGLW+D V+GQSLRPIPIGRDVV+DV+ F+M GR+FRNLR Sbjct 183 ATCHAHGWRIAVVGCGERRLGLWTDSTVLGQSLRPIPIGRDVVVDVAGFDMVGRKFRNLR 242 Query 281 QAVKRTHNFGVTTEIVAEQQLDDQRQAELAEVLAASPSGARTDRGFCMNLDGVLEGRYPG 340 QAVKRTHN GVTTEIV EQ LDD+ AEL EV+ S GA DRGF MNLDGVLEGR+PG Sbjct 243 QAVKRTHNCGVTTEIVPEQGLDDELLAELTEVVHESSKGAHADRGFHMNLDGVLEGRFPG 302 Query 341 IQLIIARDASGRVQGFHRYATAGGGSDMSLDVPWRRRGAPNGIDERLSADMIAAAKDAGV 400 IQLIIARD +G VQ FHRYATAG GSD++LDVPWRRR APNG+DERLS DMI A K+ G Sbjct 303 IQLIIARDKAGTVQAFHRYATAGAGSDITLDVPWRRRSAPNGLDERLSVDMIMAGKETGA 362 Query 401 QRLSLAFAAFPDLFGANQLGRLQRVCRALIHILDPLIALESLYRYLRKFHALDERRYVLI 460 QR+SLAFAAFP++F G QRV LIH+LDPLIALESLYRY+RK+HALD RRY LI Sbjct 363 QRVSLAFAAFPEIFDDKNRGWTQRVFYRLIHVLDPLIALESLYRYVRKWHALDARRYALI 422 Query 461 SMTQVFALALVLLSLEFVPRRRHL 484 SMTQ+ L VLLSLEF+PRRRHL Sbjct 423 SMTQIVPLLFVLLSLEFMPRRRHL 446 >gi|169629721|ref|YP_001703370.1| hypothetical protein MAB_2636c [Mycobacterium abscessus ATCC 19977] gi|169241688|emb|CAM62716.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=469 Score = 513 bits (1320), Expect = 4e-143, Method: Compositional matrix adjust. Identities = 267/462 (58%), Positives = 333/462 (73%), Gaps = 7/462 (1%) Query 23 PSADVVPRLRGRQRVVVHVDSRTARCVGALALVCAACWLIALLA--GDYRHAQWAVAGRL 80 P+A P +R +R+ VH DSR AR V A L+ WL+ L+A G RH + + Sbjct 4 PAAATTP-VRIAERIAVHSDSRPARFVSAATLLLVTGWLVLLVAHSGYLRHPDF---DEI 59 Query 81 GWSLTVLAAVAFIARGIFLGRPVTAMHATAAGLFLLAGLAAHVLVADLLGEILIAGSGWA 140 W LTVL V FIARGIFLGRPVT HA AG+ ++ L A+VL + +GE L+ +G Sbjct 60 LWPLTVLFCVGFIARGIFLGRPVTYGHAAWAGVAVMTALGANVLQFERVGEALVVAAGLI 119 Query 141 LMWPTSAHPRPEDLPRVWALINATRADSLAPFAMQAGKSHHFSAAGTAALAYRTRIGYAV 200 LMWPTSA P+PE L +V ALI+ T D LA FAM + KS++F+A +AA+AYRTR G+AV Sbjct 120 LMWPTSARPQPEALAQVSALIDKTSDDPLAVFAMHSLKSYYFNADRSAAIAYRTRAGFAV 179 Query 201 VSGDPIGDEAQFPQLVADFAAMCHMHGWRIVVVGCSERRLGLWSDPMVVGQSLRPIPIGR 260 V GDPIGDE++FP LV DFAAMC HGWR+ V+GCSE L LW+D VG LR + +GR Sbjct 180 VGGDPIGDESRFPALVRDFAAMCRSHGWRVAVLGCSEHALPLWTDSRTVGHHLRAVAVGR 239 Query 261 DVVIDVSNFEMTGRRFRNLRQAVKRTHNFGVTTEIVAEQQLDDQRQAELAEVLAASPSGA 320 DVV+DV F++ GR++RNLRQ V+RT N G+TTE+V E+ LD +AEL +V+ S G Sbjct 240 DVVVDVQAFDLVGRKYRNLRQGVQRTRNAGITTEVVDERALDGALRAELQQVMELS-HGG 298 Query 321 RTDRGFCMNLDGVLEGRYPGIQLIIARDASGRVQGFHRYATAGGGSDMSLDVPWRRRGAP 380 R +RGF M LDG L GRYPGI+LIIARD G VQGFHRYAT+GGG+D+SLDVPWRR G+P Sbjct 299 RYERGFSMLLDGALLGRYPGIRLIIARDNLGVVQGFHRYATSGGGTDVSLDVPWRRPGSP 358 Query 381 NGIDERLSADMIAAAKDAGVQRLSLAFAAFPDLFGANQLGRLQRVCRALIHILDPLIALE 440 NGIDERL+ DMI A+ G +RLSLAFAAFP++F R Q++C + IH+LDPLIALE Sbjct 359 NGIDERLTVDMICRARSEGARRLSLAFAAFPEIFAEKDRTRPQQICYSAIHMLDPLIALE 418 Query 441 SLYRYLRKFHALDERRYVLISMTQVFALALVLLSLEFVPRRR 482 SLYRYLRKFHAL ERRYVL+ M+ + +A LLSLEF+PR R Sbjct 419 SLYRYLRKFHALGERRYVLVQMSTLPLVAFALLSLEFMPRLR 460 >gi|296169077|ref|ZP_06850737.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896268|gb|EFG75929.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=473 Score = 512 bits (1318), Expect = 6e-143, Method: Compositional matrix adjust. Identities = 281/454 (62%), Positives = 331/454 (73%), Gaps = 1/454 (0%) Query 31 LRGRQRVVVHVDSRTARCVGALALVCAACWLIALLAGDYRHAQWAVAGRLGWSLTVLAAV 90 +RGR+RV+V D AR + L L WL AL A +Y + A GR GWS+ +L AV Sbjct 2 VRGRERVLVGADVPAARVLSVLLLFGVLVWLTALGAREYLGYERAGPGRFGWSVALLGAV 61 Query 91 AFIARGIFLGRPVTAMHATAAGLFLLAGLAAHVLVADLLGEILIAGSGWALMWPTSAHPR 150 A IARGIFLGRPVTA HAT A + AGL AH L +LG +LIA SG ALM PT+A P+ Sbjct 62 ALIARGIFLGRPVTAAHATYAAAGVAAGLGAHFLSWAVLGNVLIACSGLALMSPTTARPQ 121 Query 151 PEDLPRVWALINATRADSLAPFAMQAGKSHHFSAAGTAALAYRTRIGYAVVSGDPIGDEA 210 PE L RVWAL++ATR D LAPFAM + KS+HFS GTAA+A+RTR+G+AVVSGDPIGD A Sbjct 122 PELLGRVWALVDATRGDPLAPFAMHSSKSYHFSTGGTAAIAFRTRLGFAVVSGDPIGDAA 181 Query 211 QFPQLVADFAAMCHMHGWRIVVVGCSERRLGLWSDPMVVGQSLRPIPIGRDVVIDVSNFE 270 +F LVADF MC GW+I+V+ ER L LW VGQ + +PIGRDVV+DV F Sbjct 182 EFGALVADFVRMCRGRGWQIIVLAAGERHLRLWRRD-TVGQPMLSVPIGRDVVVDVRRFT 240 Query 271 MTGRRFRNLRQAVKRTHNFGVTTEIVAEQQLDDQRQAELAEVLAASPSGARTDRGFCMNL 330 + GRRFRNLRQAV+RTHN GVTTEIV EQ+L AEL EVL A+ RTDRGFCMNL Sbjct 241 LRGRRFRNLRQAVQRTHNCGVTTEIVDEQRLGGTTLAELTEVLYAAHRAVRTDRGFCMNL 300 Query 331 DGVLEGRYPGIQLIIARDASGRVQGFHRYATAGGGSDMSLDVPWRRRGAPNGIDERLSAD 390 DG L+GR+PG++L IARD GR FHRY TAGGGS++SLDVP+RR APNG+DERL+ D Sbjct 301 DGALQGRFPGVELAIARDGRGRAVAFHRYLTAGGGSEVSLDVPFRRPDAPNGVDERLTVD 360 Query 391 MIAAAKDAGVQRLSLAFAAFPDLFGANQLGRLQRVCRALIHILDPLIALESLYRYLRKFH 450 MIA A G QRLSLAFAAFP++F A + G LQR LIH+LDPLI LESLYRYLRKFH Sbjct 361 MIAHAASTGGQRLSLAFAAFPEIFEAARPGPLQRTALRLIHLLDPLIRLESLYRYLRKFH 420 Query 451 ALDERRYVLISMTQVFALALVLLSLEFVPRRRHL 484 AL ERRYV++ + + A LVLLSLEFVPR R + Sbjct 421 ALSERRYVVLCVHHIPAALLVLLSLEFVPRPRRM 454 >gi|226360750|ref|YP_002778528.1| hypothetical protein ROP_13360 [Rhodococcus opacus B4] gi|226239235|dbj|BAH49583.1| hypothetical membrane protein [Rhodococcus opacus B4] Length=455 Score = 365 bits (937), Expect = 9e-99, Method: Compositional matrix adjust. Identities = 193/393 (50%), Positives = 255/393 (65%), Gaps = 1/393 (0%) Query 89 AVAFIARGIFLGRPVTAMHATAAGLFLLAGLAAHVLVADLLGEILIAGSGWALMWPTSAH 148 A+ F+ARG+ L RPVT H A LF+ A A+ G +L+ +G LM P + Sbjct 61 AMLFVARGLHLRRPVTLTHMVGAVLFVAAADVAYTSAHPAPGFVLLVATGPVLMLPVRSV 120 Query 149 PRPEDLPRVWALINATRADSLAPFAMQAGKSHHFSAAGTAALAYRTRIGYAVVSGDPIGD 208 P+PED RV+ALI T D L+PFA+ + KS++F+A+GTAA+AYR R G AVV+GDPIGD Sbjct 121 PQPEDRARVFALIQQTTEDPLSPFALNSAKSYYFNASGTAAIAYRARSGIAVVAGDPIGD 180 Query 209 EAQFPQLVADFAAMCHMHGWRIVVVGCSERRLGLWSDPMVVGQSLRPIPIGRDVVIDVSN 268 +F L+ +F GWR+ V+G ER LW +SLR +PIGRDVVIDV Sbjct 181 PVEFVALLDEFDEFAAERGWRVAVLGAGERVARLWEIGGDTRKSLRAVPIGRDVVIDVGG 240 Query 269 FEMTGRRFRNLRQAVKRTHNFGVTTEIVAEQQLDDQRQAELAEVLAASPSGARTDRGFCM 328 F + GR+FRNLRQAV+RTHN G+TTEIV E LD+ + EL ++ + +G + RGF M Sbjct 241 FTLHGRKFRNLRQAVQRTHNAGITTEIVPEAALDEPTRRELTAIVDDARAGHQR-RGFSM 299 Query 329 NLDGVLEGRYPGIQLIIARDASGRVQGFHRYATAGGGSDMSLDVPWRRRGAPNGIDERLS 388 LD +L+G PG+ L+IARDASGR F RY TAG ++SLDVPWR APNG DER++ Sbjct 300 ILDHLLDGTLPGLLLVIARDASGRAVAFQRYGTAGSARELSLDVPWRGDDAPNGTDERMT 359 Query 389 ADMIAAAKDAGVQRLSLAFAAFPDLFGANQLGRLQRVCRALIHILDPLIALESLYRYLRK 448 D+I A+ G + +SL+FAAFP+L + G R+ R ++H+ D LIALESLYRYL K Sbjct 360 VDVIRYAERTGARYVSLSFAAFPELLDPDAPGAGARLFRRILHLGDALIALESLYRYLGK 419 Query 449 FHALDERRYVLISMTQVFALALVLLSLEFVPRR 481 FH+ RRYVL+ + +A L+ EFVP R Sbjct 420 FHSTGNRRYVLLRFRYLLPVAFACLTFEFVPHR 452 >gi|111018637|ref|YP_701609.1| lysyl-tRNA synthetase [Rhodococcus jostii RHA1] gi|110818167|gb|ABG93451.1| possible lysyl-tRNA synthetase [Rhodococcus jostii RHA1] Length=455 Score = 353 bits (905), Expect = 5e-95, Method: Compositional matrix adjust. Identities = 194/410 (48%), Positives = 265/410 (65%), Gaps = 5/410 (1%) Query 76 VAGRLG----WSLTVLAAVAFIARGIFLGRPVTAMHATAAGLFLLAGLAAHVLVADLLGE 131 +AGR G W + AV +ARG+ L RPVT H+ AA LF+ A A+ G Sbjct 44 MAGRSGPVRTWMVAAGIAVLLVARGLHLRRPVTTTHSAAAVLFVAAADVAYTSAHSTPGF 103 Query 132 ILIAGSGWALMWPTSAHPRPEDLPRVWALINATRADSLAPFAMQAGKSHHFSAAGTAALA 191 +L+ +G LM P + P+PED RV++LI T D L+PFA+ + KS++F+A+GTAA+A Sbjct 104 LLLVATGPVLMLPVRSVPQPEDRARVFSLIQQTTDDPLSPFALNSAKSYYFNASGTAAIA 163 Query 192 YRTRIGYAVVSGDPIGDEAQFPQLVADFAAMCHMHGWRIVVVGCSERRLGLWSDPMVVGQ 251 YR R G AVVSGDPIG+ +F L+ +F+ GWR+ V+G ER LW + Sbjct 164 YRARSGIAVVSGDPIGNALEFGALLDEFSEFAAERGWRVAVLGAGERVARLWGFGGDTRK 223 Query 252 SLRPIPIGRDVVIDVSNFEMTGRRFRNLRQAVKRTHNFGVTTEIVAEQQLDDQRQAELAE 311 L +PIGRDVVIDV +F + GR+FRNLRQAV+RTHN G+TTEIV E LD+ + EL++ Sbjct 224 PLSAVPIGRDVVIDVGHFTLHGRKFRNLRQAVQRTHNAGLTTEIVPEAALDEPTRRELSD 283 Query 312 VLAASPSGARTDRGFCMNLDGVLEGRYPGIQLIIARDASGRVQGFHRYATAGGGSDMSLD 371 ++ + +G + RGF M LD +L+G PGI L+IARD++GR F RY TA ++SLD Sbjct 284 IVEVARAGHQR-RGFSMILDHLLDGALPGILLVIARDSTGRAIAFQRYGTADSARELSLD 342 Query 372 VPWRRRGAPNGIDERLSADMIAAAKDAGVQRLSLAFAAFPDLFGANQLGRLQRVCRALIH 431 VPWR GAPNG DER++ D+I A+ G + +SL+FAAFP+L + G R+ R ++H Sbjct 343 VPWRGDGAPNGTDERMTVDVIRYAEHTGARYVSLSFAAFPELLAPDAPGAGARLFRRVLH 402 Query 432 ILDPLIALESLYRYLRKFHALDERRYVLISMTQVFALALVLLSLEFVPRR 481 + D LI+LESLYRYL KFH+ RRYVL+ + +A L+ EFVP R Sbjct 403 LGDVLISLESLYRYLGKFHSTGNRRYVLLRFRYLLPVAFACLTFEFVPHR 452 >gi|256396684|ref|YP_003118248.1| hypothetical protein Caci_7583 [Catenulispora acidiphila DSM 44928] gi|256362910|gb|ACU76407.1| protein of unknown function DUF470 [Catenulispora acidiphila DSM 44928] Length=597 Score = 213 bits (541), Expect = 7e-53, Method: Compositional matrix adjust. Identities = 136/338 (41%), Positives = 186/338 (56%), Gaps = 16/338 (4%) Query 156 RVWALINATRADSLAPFAMQAGKSHHFSAAGTAALAYRTRIGYAVVSGDPIGDEAQFPQL 215 RV L+ +D+LAPFA++ KS+ FS G AA+ YR +G AVV GDP+G Sbjct 231 RVRRLVQHPDSDTLAPFALRHDKSYVFSPDGRAAIGYRVFLGTAVVGGDPLGAADAREAA 290 Query 216 VADFAAMCHMHGWRIVVVGCSERRLGLWSDPMVVGQSLRPIPIGRDVVIDVSNFEMTGRR 275 V +F A+C GWR V+G E + LW + R I IG +V++DV+ F + GR Sbjct 291 VVEFLALCRRQGWRPTVLGAREELMPLWKAHGI----RRGIEIGDEVMLDVAGFSLEGRS 346 Query 276 FRNLRQAVKRTHNFGVTTEIVAEQQLDDQRQAELAEVLAASPSGARTDRGFCMNLDGVLE 335 RN+RQAV+RTH G+TT ++ E LD++ +L + G + GF MNLD + Sbjct 347 IRNVRQAVRRTHKTGITTRVLRETALDEEEADQLLGIHQRWLKG-HAEHGFAMNLDAITS 405 Query 336 GRYPGIQLIIARDASGRVQGFHRYATAGGG------SDMSLDVPWRRRGAPNGIDERLSA 389 R+P LI+A A GR GF RY GG + +SLDV R +PNG++ERL Sbjct 406 ARHPDALLIVAYAADGRAVGFQRYHPVGGDQASGHPTALSLDVMPRDPQSPNGVNERLIV 465 Query 390 DMIAAAKDAGVQRLSLAFAAF-PDLFGANQLGRLQRVCRALIHILDPLIALESLYRYLRK 448 D+IA A D G+ +SL FAAF P + + Q IH+LDP I LESLYR+ K Sbjct 466 DLIAWAHDRGIGEISLNFAAFRPIMDAGAERTLFQSAAYRAIHLLDPWIMLESLYRFNAK 525 Query 449 FHALDERRYVLI-SMTQVFALALVLLSLEF---VPRRR 482 F + R V+ S +V LA L++EF + RRR Sbjct 526 FRPGWQPRSVMFRSWGEVGWLAASALAMEFSLPLDRRR 563 >gi|300782209|ref|YP_003762500.1| lysyl-tRNA synthetase [Amycolatopsis mediterranei U32] gi|299791723|gb|ADJ42098.1| lysyl-tRNA synthetase [Amycolatopsis mediterranei U32] gi|340523568|gb|AEK38773.1| lysyl-tRNA synthetase [Amycolatopsis mediterranei S699] Length=571 Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 105/324 (33%), Positives = 164/324 (51%), Gaps = 23/324 (7%) Query 146 SAHPRP----EDLPRVWALINA-TRADSLAPFAMQAGKSHHFSAAGTAALAYRTRIGYAV 200 SA P P E++ R+ L++ DSL FA++ K FS G AA+ YR G A+ Sbjct 227 SAEPAPRLSDEEVARLRRLLDEHGERDSLGYFALRRDKFAVFSRTGKAAVTYRVIAGVAL 286 Query 201 VSGDPIGDEAQFPQLVADFAAMCHMHGWRIVVVGCSERRLGLWSDPMVVGQSLRPIPIGR 260 S DP+GD +P + ++ +C GW +G SE +W+ L + IG Sbjct 287 CSADPLGDHEAWPGAIEEYLEVCRRGGWVPAAMGVSELGATVWAR-----FGLEVLEIGD 341 Query 261 DVVIDVSNFEMTGRRFRNLRQAVKRTHNFGVTTEIVAEQQLDDQRQAELA--EVLAASPS 318 + V+D + F + GR R +RQA RT G + ++ +D R EL EVLAA+ Sbjct 342 EAVVDAAGFTLDGRTMRGVRQAAARTKRAGYKVLV---RRAEDLRPGELEELEVLAATWR 398 Query 319 GARTDRGFCMNLDGVLEGRYPGIQLIIARDASGRVQGFHRYATAGGGSDMSLDVPWRRRG 378 G T+RGF M L + + R +++ + GRV+G ++ G + +SLDV R R Sbjct 399 GTDTERGFSMALGRMGDPR----SVLVTAEQGGRVRGVLQF-VPWGPTGLSLDVMRRDRS 453 Query 379 APNGIDERLSADMIAAAKDAGVQRLSLAFAAFPDLFGANQ---LGRLQRVCRALIHILDP 435 A NG++E + ++++ AA GV ++SL FAAF L Q G + + ++H Sbjct 454 ADNGVNELMISELLLAAGRHGVSQVSLNFAAFRALMEQGQRIGAGPVAKTAAKVLHFFSR 513 Query 436 LIALESLYRYLRKFHALDERRYVL 459 I +E+LYR+ KF RY++ Sbjct 514 WIQIETLYRFNAKFQPRWVPRYLV 537 >gi|300783136|ref|YP_003763427.1| lysyl-tRNA synthetase, class II [Amycolatopsis mediterranei U32] gi|299792650|gb|ADJ43025.1| lysyl-tRNA synthetase, class II [Amycolatopsis mediterranei U32] gi|340524515|gb|AEK39720.1| lysyl-tRNA synthetase [Amycolatopsis mediterranei S699] Length=1107 Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 109/323 (34%), Positives = 165/323 (52%), Gaps = 16/323 (4%) Query 167 DSLAPFAMQAGKSHHFSAAGTAALAYRTRIGYAVVSGDPIGDEAQFPQLVADFAAMCHMH 226 DSL FA + KS F+ G AA+ YR G +V S DP+GD +P V + + Sbjct 271 DSLGYFATRRDKSVVFAPNGRAAVTYRVLGGTSVASADPVGDPEAWPDAVRAWLDETRTY 330 Query 227 GWRIVVVGCSERRLGLWSDPMVVGQSLRPIPIGRDVVIDVSNFEMTGRRFRNLRQAVKRT 286 GW V+G SER ++ G LR + IG + V+DV F + G R++RQAVKR Sbjct 331 GWTPGVLGASERGAKAYT-----GAGLRALEIGDEAVLDVREFSLAGPERRSVRQAVKRI 385 Query 287 HNFGVTTEIVAEQQLDDQRQAELAEVLAASPS--GARTDRGFCMNLDGVLEGRYPGIQLI 344 G T+ + ++ +AE+ E+LA + + GA T+RGF M L + + ++ Sbjct 386 ERAGYTSRVRRHGEIP---EAEMTELLARAQAWRGAETERGFSMALGRLGDASDGRSVMV 442 Query 345 IARDASGRVQGFHRYATAGGGSDMSLDVPWRRRGAPNGIDERLSADMIAAAKDAGVQRLS 404 A DA G ++G + G +SLD+ R R A NG++E + A+ +AAA+ G QR+S Sbjct 443 EAYDAHGELRGLLSF-VPWGRRGLSLDLMRRDRDAENGLNEYMIAETVAAAQVLGAQRIS 501 Query 405 LAFAAFPDLFGANQ---LGRLQRVCRALIHILDPLIALESLYRYLRKFHALDERRYVLIS 461 L FA F +F + G + R R ++ + LESLYR K+ E R++ S Sbjct 502 LNFAMFRAVFSEGERIGAGPVLRAWRGILSVFSRFFQLESLYRSNAKYGPDWEPRFLCYS 561 Query 462 MTQVFA-LALVLLSLE-FVPRRR 482 + + +V +LE FVP R Sbjct 562 SARRLPRVGIVAGALEGFVPTGR 584 >gi|302531633|ref|ZP_07283975.1| integral membrane lysyl-tRNA synthetase [Streptomyces sp. AA4] gi|302440528|gb|EFL12344.1| integral membrane lysyl-tRNA synthetase [Streptomyces sp. AA4] Length=574 Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 105/326 (33%), Positives = 163/326 (50%), Gaps = 27/326 (8%) Query 146 SAHPRPE----DLPRVWALINA-TRADSLAPFAMQAGKSHHFSAAGTAALAYRTRIGYAV 200 SA P PE +L R+ L+ DSL FA++ K FS G AA+ +R G A+ Sbjct 231 SAEPAPELSDDELARLHELLKQHGDRDSLGYFALRRDKFAVFSKTGKAAVTFRVIAGVAL 290 Query 201 VSGDPIGDEAQFPQLVADFAAMCHMHGWRIVVVGCSERRLGLWSDPMVVGQSLRPIPIGR 260 S DP+GD +P + ++ +C + W +G SE +W+ L + IG Sbjct 291 TSADPLGDHEAWPGAIEEYLDICQRNAWVPAAMGASELGATVWAR-----FGLEVLEIGD 345 Query 261 DVVIDVSNFEMTGRRFRNLRQAVKRTHNFGVTTEIVAEQQLDDQRQAELAEV--LAASPS 318 + V+D F + GR R +RQA RT G + ++ +D R EL+E+ LAA+ Sbjct 346 EAVVDTETFTLEGRVMRGVRQASSRTKRAGYKVLV---RRAEDLRPGELSELVHLAAAWR 402 Query 319 GARTDRGFCMNLDGVLEGRY--PGIQLIIARDASGRVQGFHRYATAGGGSDMSLDVPWRR 376 G T+RGF M L GR PG +I+ + G V+G ++ G +SLDV R Sbjct 403 GTETERGFSMAL-----GRMGDPG-SVIVTAEQGGSVRGVLQF-VPWGDRGLSLDVMRRD 455 Query 377 RGAPNGIDERLSADMIAAAKDAGVQRLSLAFAAFPDLFGANQ---LGRLQRVCRALIHIL 433 R A NG++E + ++++ +++ G+ +SL FAAF L Q G + R+ ++H Sbjct 456 RTADNGVNELMISELLLFSRENGIDHVSLNFAAFRALMEQGQRIGAGPVARLSAKVLHFF 515 Query 434 DPLIALESLYRYLRKFHALDERRYVL 459 I +ESLYR+ KF RY++ Sbjct 516 SRWIQIESLYRFNAKFQPRWVPRYLV 541 >gi|284990815|ref|YP_003409369.1| lysyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160] gi|284064060|gb|ADB74998.1| lysyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160] Length=1132 Score = 139 bits (351), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 109/319 (35%), Positives = 153/319 (48%), Gaps = 20/319 (6%) Query 141 LMWPTSAHPRP---EDLPRVWALINATRADSLAPFAMQAGKSHHFSAAGTAALAYRTRIG 197 L P +A RP +D L++ D+LA F+++ K+ FS G A LAY G Sbjct 764 LFRPLAAARRPHTEDDWAHASRLVHGYGWDTLAYFSLRDDKTFFFSRDGEAFLAYTYLGG 823 Query 198 YAVVSGDPIGDEAQFPQLVADFAAMCHMHGWRIVVVGCSERRLGLWSDPMVVGQSLRPIP 257 YA+VSGDPIG P+++ +F AMC W ++ E + L+S + R Sbjct 824 YALVSGDPIGSRESVPRVLDEFLAMCDERAWTPALLAAREASMPLYSS-----RGFRAFY 878 Query 258 IGRDVVIDVSNFEMTGRRFRNLRQAVK---RTHNFGVTTEIVAEQQLDDQRQAELAEVLA 314 +G + VID F + G + LR AV+ R+H F + E A L DQ A ++ Sbjct 879 LGDEAVIDCRRFTLEGPAKKGLRAAVRRVGRSHRFRLVAETDAPPALVDQLNA-----IS 933 Query 315 ASPSGARTDRGFCMNLDGVLE--GRYPGIQLIIARDASGRVQGFHRYATAGGGS-DMSLD 371 A G +RGF M+L + G PG L +A DA GR GF R A G S +LD Sbjct 934 ARWRGKNPERGFTMSLSQDVRGAGADPGFLLCVAEDAEGRAGGFLRLVPAYGPSFGYTLD 993 Query 372 VPWRRRGAPNGIDERLSADMIAAAKDAGVQRLSLAFAAFPDLFGAN-QLGRLQRVCRALI 430 + APNG+ E L A A GV RLS+ FA + LF + QR R + Sbjct 994 LMRHDPDAPNGMTEFLIASTATALGARGVARLSMNFAMWGRLFADDVPFTPAQRAARWAV 1053 Query 431 HILDPLIALESLYRYLRKF 449 +L+P +ESL+ + KF Sbjct 1054 GVLNPFFQIESLHDFNAKF 1072 >gi|331697678|ref|YP_004333917.1| lysyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190] gi|326952367|gb|AEA26064.1| lysyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190] Length=597 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 105/321 (33%), Positives = 160/321 (50%), Gaps = 16/321 (4%) Query 146 SAHPRPE----DLPRVWALINATRA-DSLAPFAMQAGKSHHFSAAGTAALAYRTRIGYAV 200 S P P+ D R+ AL++ DSL FA++ K+ FS G +A++YR G A+ Sbjct 251 SPEPEPQLSDDDQARLRALLDKQGGRDSLGYFALREDKTVVFSPTGKSAVSYRVLAGVAL 310 Query 201 VSGDPIGDEAQFPQLVADFAAMCHMHGWRIVVVGCSERRLGLWSDPMVVGQSLRPIPIGR 260 SGDP+GD +P + F C +GW V+GCSE W+ VG L + G Sbjct 311 ASGDPVGDHEAWPGAIEMFLGECTSYGWVPAVLGCSELGATAWAR---VG--LDVLEFGD 365 Query 261 DVVIDVSNFEMTGRRFRNLRQAVKRTHNFGVTTEIVAEQQLDDQRQAELAEVLAASPSGA 320 + V+DV+ F + GR R +RQA R G T + +LDD + L A+ G Sbjct 366 EAVLDVAGFTLEGRAMRGIRQAAARLTRAGYTVRVRRLDELDDDERTAL-RTHASRWRGD 424 Query 321 RTDRGFCMNLDGVLEGRYPGIQLIIARDASGRVQGFHRYATAGGGSDMSLDVPWRRRGAP 380 +RG+ M L V + R P L++A + GR +G ++ G +SLD+ R + Sbjct 425 AVERGYSMALSRVADVRDPRGVLVVA-ELDGRTRGLLQF-VPWGSDGLSLDLMRRDPTSE 482 Query 381 NGIDERLSADMIAAAKDAGVQRLSLAFAAFPDLFGANQ---LGRLQRVCRALIHILDPLI 437 NG++E + A+++AAA+ GV+R+SL FA F + G + R L+ + Sbjct 483 NGLNELMIAELMAAAEGLGVRRVSLNFAVFRAALERGERIGAGPIARTWAKLLRLASRWW 542 Query 438 ALESLYRYLRKFHALDERRYV 458 ++SLYR+ KF RYV Sbjct 543 QIDSLYRFNDKFRPRWVPRYV 563 >gi|256375052|ref|YP_003098712.1| lysyl-tRNA synthetase [Actinosynnema mirum DSM 43827] gi|255919355|gb|ACU34866.1| lysyl-tRNA synthetase [Actinosynnema mirum DSM 43827] Length=1094 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 108/323 (34%), Positives = 158/323 (49%), Gaps = 12/323 (3%) Query 167 DSLAPFAMQAGKSHHFSAAGTAALAYRTRIGYAVVSGDPIGDEAQFPQLVADFAAMCHMH 226 DSL FA + KS S G AAL YR G + SGDP+GDE + Q V + + Sbjct 260 DSLGYFATRRDKSAVLSPDGRAALTYRVLAGTTLASGDPVGDEDSWRQAVRAWLDEARRY 319 Query 227 GWRIVVVGCSERRLGLWSDPMVVGQSLRPIPIGRDVVIDVSNFEMTGRRFRNLRQAVKRT 286 GWR V+G SER ++ + L+ + IG + V+DV F + G R +RQAV R Sbjct 320 GWRAGVLGASERGARAYA-----AEGLKALEIGDEAVLDVREFSLAGPERRAVRQAVSRV 374 Query 287 HNFGVTTEIVAEQQLDDQRQAELAEVLAASPSGARTDRGFCMNLDGVLEGRYPGIQLIIA 346 G T + ++ A L + LA GA+T+RGF M L + + ++ A Sbjct 375 ERAGYTARVRRHAEIPADEMAGLLD-LAQRWRGAQTERGFSMALGRLGDESDGRCAMVEA 433 Query 347 RDASGRVQGFHRYATAGGGSDMSLDVPWRRRGAPNGIDERLSADMIAAAKDAGVQRLSLA 406 DA G ++G + G +SLD+ R R A NG++E + A+++AAA GVQR+SL Sbjct 434 YDADGALRGLLSF-VPWGRRGLSLDLMRRDRTAENGLNEFMVAELVAAAGRLGVQRVSLN 492 Query 407 FAAFPDLFGANQ---LGRLQRVCRALIHILDPLIALESLYRYLRKFHALDERRYVLISMT 463 FA F +F + G + R R ++ + + LESLYR K+ + RY+ S Sbjct 493 FAMFRAVFEEGEKLGAGPVLRAWRGVLGLASRFLQLESLYRSNAKYGPDWQPRYLCYSGV 552 Query 464 QVFALALVLLSLE--FVPRRRHL 484 + V + FVP R L Sbjct 553 RSLPRVSVAAGVAEGFVPNLRSL 575 >gi|325003614|ref|ZP_08124726.1| lysyl-tRNA synthetase [Pseudonocardia sp. P1] Length=594 Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 108/340 (32%), Positives = 161/340 (48%), Gaps = 19/340 (5%) Query 129 LGEILIAGSGWALMWPTSAHPRPE----DLPRVWALINATRADSLAPFAMQAGKSHHFSA 184 G + + +G+ L+ S PRP D ++ +L+ DSL FA++ K+ FS Sbjct 234 FGVVAVVTAGYHLL--RSPEPRPSLEPGDEQQLRSLLGRPGGDSLGYFALRRDKAAVFSH 291 Query 185 AGTAALAYRTRIGYAVVSGDPIGDEAQFPQLVADFAAMCHMHGWRIVVVGCSERRLGLWS 244 G++A++YR G A+ SGDP+GD +P + +F C +GW V+GCSER W+ Sbjct 292 GGSSAVSYRVLAGVALASGDPVGDVGAWPGAIEEFLGQCTRYGWSPAVLGCSERGATAWA 351 Query 245 DPMVVGQSLRPIPIGRDVVIDVSNFEMTGRRFRNLRQAVKRTHNFGVTTEIVAEQQLDDQ 304 L + +G + V+D + F + GR R +RQ V R G T + + Sbjct 352 K-----AGLDALELGDEAVLDTATFTLDGRPMRGVRQTVARMQRSGHTVTVARLSEHTPD 406 Query 305 RQAELAEVLAASPSGARTDRGFCMNLDGVLEGRYPGIQLIIA-RDASGRVQGFHRYATAG 363 A +AE A G +RGF M V + P ++ A RD G G + Sbjct 407 ELAAIAE-RAHRWRGDDHERGFSMASSRVADPADPDAVVVTALRD--GEPTGMLQL-VPW 462 Query 364 GGSDMSLDVPWRRRGAPNGIDERLSADMIAAAKDAGVQRLSLAFAAFPDLFGANQ---LG 420 G +SLD+ R GA NGI+E + A+++AAA GV R+SL FA F + G Sbjct 463 GPDGLSLDLMVRAAGADNGINELMIAELLAAAPGLGVTRVSLNFAVFRSALERGERIGAG 522 Query 421 RLQRVCRALIHILDPLIALESLYRYLRKFHALDERRYVLI 460 + R L+ I ++SLYR+ KF RYVL Sbjct 523 PVARTWARLLRIASRWWQIDSLYRFNAKFRPAWYPRYVLF 562 >gi|302524477|ref|ZP_07276819.1| lysyl-tRNA synthetase [Streptomyces sp. AA4] gi|302433372|gb|EFL05188.1| lysyl-tRNA synthetase [Streptomyces sp. AA4] Length=1103 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 109/324 (34%), Positives = 167/324 (52%), Gaps = 18/324 (5%) Query 167 DSLAPFAMQAGKSHHFSAAGTAALAYRTRIGYAVVSGDPIGDEAQFPQLVADFAAMCHMH 226 DSL FA + KS F+ G AA+ YR G V S DPIGD +P+ V + + Sbjct 267 DSLGYFATRRDKSVMFAPNGRAAVTYRVLAGTTVASADPIGDPDAWPEAVQAWLHEARTY 326 Query 227 GWRIVVVGCSERRLGLWSDPMVVGQSLRPIPIGRDVVIDVSNFEMTGRRFRNLRQAVKRT 286 GW V+G SE+ +++ LR + IG + V+DV F +TG +++RQAVKR Sbjct 327 GWTPGVLGASEKGAKVYA-----AAGLRALQIGDEAVLDVREFSLTGPERKSVRQAVKRI 381 Query 287 HNFGVTTEIVAEQQLDDQRQAELAEVLAASPSG--ARTDRGFCMNLDGVLEGRYPGIQLI 344 G T ++ ++ + E+A++LA + T+RGF M L G L G ++ Sbjct 382 QRAGYTAQVRRHSEIPED---EMAQLLARAQQWRVDETERGFSMAL-GRLGDPSDGRSVM 437 Query 345 I-ARDASGRVQGFHRYATAGGGSDMSLDVPWRRRGAPNGIDERLSADMIAAAKDAGVQRL 403 + A DA G ++G + G +SLD+ R R A NG++E + A+++AAA+ G QR+ Sbjct 438 VEAYDARGELRGLLSF-VPWGRRGLSLDLMRRDRDAENGLNEFMVAEVVAAAQHIGTQRI 496 Query 404 SLAFAAFPDLFGANQ---LGRLQRVCRALIHILDPLIALESLYRYLRKFHALDERRYVLI 460 SL FA F +F + G + R RA++ + LESLYR K+ E R++ Sbjct 497 SLNFAMFRAVFSEGERIGAGPVLRAWRAVLGVASRFFQLESLYRSNAKYGPEWEPRFLCY 556 Query 461 SMTQVFA-LALVLLSLE-FVPRRR 482 S + + +V +LE FVP R Sbjct 557 SSARRLPRVGIVAGALEGFVPTGR 580 >gi|284034397|ref|YP_003384328.1| lysyl-tRNA synthetase [Kribbella flavida DSM 17836] gi|283813690|gb|ADB35529.1| lysyl-tRNA synthetase [Kribbella flavida DSM 17836] Length=1117 Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 105/318 (34%), Positives = 158/318 (50%), Gaps = 12/318 (3%) Query 160 LINATRADSLAPFAMQAGKSHHFSAAGTAALAYRTRIGYAVVSGDPIGDEAQFPQLVADF 219 L+ DSL FA + K+ F+ AA+AYR G ++ SGDP+GD A +P + + Sbjct 263 LLQYGERDSLGYFATRRDKAVVFAPGNDAAIAYRVVNGVSLASGDPLGDPAAWPGAIEQW 322 Query 220 AAMCHMHGWRIVVVGCSERRLGLWSDPMVVGQSLRPIPIGRDVVIDVSNFEMTGRRFRNL 279 A ++GW V+ SE + D LR + +G + +IDV++F + GR R + Sbjct 323 LAEARIYGWSPAVLSASEEAARAYVD-----AGLRALAMGDEAIIDVADFSLEGRTMRPV 377 Query 280 RQAVKRTHNFGVTTEIVAEQQLDDQRQAELAEVLAASPSGARTDRGFCMNLDGVLEGRYP 339 RQAV R G ++V L A+ E LA GART+RGF M L + + Sbjct 378 RQAVTRVQRAGYHAQVVRHGDLAPDDLAQYVE-LAERWRGARTERGFSMALGRLGDAADA 436 Query 340 GIQLIIARDASGRVQGFHRYATAGGGSDMSLDVPWRRRGAPNGIDERLSADMIAAAKDAG 399 ++IARDA G V+G + G +SLD+ R + NG+ E + ++ A D G Sbjct 437 RCVMVIARDAGGAVRGLLSF-VPWGVRGVSLDLMRRDPESVNGLMEFMVTALVDACGDLG 495 Query 400 VQRLSLAFAAFPDLFGANQ---LGRLQRVCRALIHILDPLIALESLYRYLRKFHALDERR 456 V R+SL FA F ++F + G + R+ AL+ LESLY+ K+ L Sbjct 496 VHRISLNFAMFREIFSDAERVGAGPVLRLTNALLTAASRFWQLESLYQSNEKY--LPRWS 553 Query 457 YVLISMTQVFALALVLLS 474 LI ++ +LA VLL+ Sbjct 554 PRLICYSRGASLAQVLLA 571 >gi|345016122|ref|YP_004818476.1| hypothetical protein Strvi_8895 [Streptomyces violaceusniger Tu 4113] gi|344042471|gb|AEM88196.1| hypothetical protein Strvi_8895 [Streptomyces violaceusniger Tu 4113] Length=610 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 109/350 (32%), Positives = 162/350 (47%), Gaps = 19/350 (5%) Query 129 LGEILIAGSGWALMWPTSAHPR--PEDLPRVWALINA-TRADSLAPFAMQAGKSHHFSAA 185 LG + +A + + P R P D R+ L+ A R DSL FA++ K+ FS + Sbjct 216 LGLLTVATTAYLAFRPEHPAARLTPGDEERLRELLAAHGRRDSLGHFALRRDKAVVFSPS 275 Query 186 GTAALAYRTRIGYAVVSGDPIGDEAQFPQLVADFAAMCHMHGWRIVVVGCSERRLGLWSD 245 G AA+ YR G + SGDP+GD +P +A F H W V+GCSE +W+ Sbjct 276 GKAAVCYRVVSGVMLASGDPVGDVEAWPGAIACFMEEARAHSWTPAVMGCSETGGEVWTR 335 Query 246 PMVVGQSLRPIPIGRDVVIDVSNFEMTGRRFRNLRQAVKRTHNFGVTTEIVAEQQLDDQR 305 L + +G + ++DV++F ++GR RN+RQ VKR G T + L + Sbjct 336 E----TGLDALELGDEAIVDVADFTLSGRAMRNVRQMVKRIERAGYQTRVRRAADLGPE- 390 Query 306 QAELAEVLAASPSGARTDRGFCMNLDGVLEGRYPGIQLIIARDASGRVQGFHRYATAG-- 363 + E AA G T+RGF M L + + + A A+G Y Sbjct 391 ELEAIRRAAADWRGTDTERGFSMALGRIGDPADGDAVIATAHKAAGEDAEEGPYGDLKAV 450 Query 364 ------GGSDMSLDVPWRRRGAPNGIDERLSADMIAAAKDAGVQRLSLAFAAFPDLFGAN 417 G MSL++ R R A G++E L + AA + GV+R+SL FA F Sbjct 451 LHFVPWGPDGMSLELMRRDRSADPGMNELLIVAALQAAPELGVERVSLNFAMFRSALARG 510 Query 418 Q---LGRLQRVCRALIHILDPLIALESLYRYLRKFHALDERRYVLISMTQ 464 + G + R RAL+ L +ESLY++ KF E R+V+ T+ Sbjct 511 EKLGAGPVLRGWRALLVFLSRWFQIESLYKFNAKFQPRWEPRFVVFRNTR 560 >gi|328883296|emb|CCA56535.1| putative membrane protein found fused to lysyl-tRNA synthetase protein [Streptomyces venezuelae ATCC 10712] Length=614 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 106/328 (33%), Positives = 155/328 (48%), Gaps = 23/328 (7%) Query 152 EDLPRVWALINATRA-DSLAPFAMQAGKSHHFSAAGTAALAYRTRIGYAVVSGDPIGDEA 210 ED R+ AL++ DSL FA+++ K FS +G AA+ YR G + SGDPIGD Sbjct 244 EDEIRLRALLDQHGGRDSLGHFALRSDKGVVFSPSGKAAVCYRVVSGVMLASGDPIGDVE 303 Query 211 QFPQLVADFAAMCHMHGWRIVVVGCSERRLGLWSDPMVVGQSLRPIPIGRDVVIDVSNFE 270 +P + F H W V+GCSE +W+ L + +G + V+DV +F Sbjct 304 AWPGAIERFMDEAKAHSWTPAVMGCSETGGQVWTRE----TGLDALELGDEAVVDVEDFS 359 Query 271 MTGRRFRNLRQAVKRTHNFGVTTEIVAEQQLDDQRQAELAEV--LAASPSGARTDRGFCM 328 ++GR RN+RQ VKR G TT++ + LDD AEL V AA G T+RGF M Sbjct 360 LSGRAMRNVRQMVKRIERNGYTTQVRRVRDLDD---AELERVRRAAADWRGTDTERGFSM 416 Query 329 NL---------DGVLEGRYPGIQLIIARDASGRVQGFHRYATAGGGSDMSLDVPWRRRGA 379 L D V+ + G ++ + G MSL++ R R A Sbjct 417 ALGRIGAPGDGDAVIATAHKSDTDDDLTSPYGDLKAIIHF-VPWGRDGMSLELMRRDRSA 475 Query 380 PNGIDERLSADMIAAAKDAGVQRLSLAFAAFPDLFGANQ---LGRLQRVCRALIHILDPL 436 G++E L + A+ G+ R+SL FA F + G + RV R L+ L Sbjct 476 DPGMNELLIVAALQASPGLGIARVSLNFAMFRSALARGEKIGAGPVLRVWRGLLVFLSRW 535 Query 437 IALESLYRYLRKFHALDERRYVLISMTQ 464 +ESLY++ KF E R+V+ ++ Sbjct 536 FQIESLYKFNAKFRPRWEPRFVVYRTSR 563 >gi|297192930|ref|ZP_06910328.1| integral membrane lysyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC 25486] gi|197722664|gb|EDY66572.1| integral membrane lysyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC 25486] Length=611 Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 99/308 (33%), Positives = 146/308 (48%), Gaps = 16/308 (5%) Query 167 DSLAPFAMQAGKSHHFSAAGTAALAYRTRIGYAVVSGDPIGDEAQFPQLVADFAAMCHMH 226 DSL FA++ K FS +G AA+ YR G + SGDPIGD +P + F H Sbjct 260 DSLGHFALRRDKGVVFSPSGKAAVCYRVVSGVMLASGDPIGDVEAWPGAIERFMDEAKAH 319 Query 227 GWRIVVVGCSERRLGLWSDPMVVGQSLRPIPIGRDVVIDVSNFEMTGRRFRNLRQAVKRT 286 W V+GCSE +W+ L + +G + V+DV++F +TGR RN+RQ VKR Sbjct 320 SWTPAVMGCSETGGEVWTRE----TGLDALELGDEAVVDVADFSLTGRAMRNVRQMVKRI 375 Query 287 HNFGVTTEIVAEQQLDDQRQAELAEVLAASPSGARTDRGFCMNLDGVLEGRYPGIQLIIA 346 G +T + + L D ++ AA G T+RGF M L + + + A Sbjct 376 ERGGYSTRVRRARDLTDDEIRQIRRA-AADWRGTDTERGFSMALGRIGDPADGDAVIATA 434 Query 347 RDAS-------GRVQGFHRYATAGGGSDMSLDVPWRRRGAPNGIDERLSADMIAAAKDAG 399 A G ++ + G G MSL++ R R A G++E L + AA G Sbjct 435 HRAEEGGTSPYGDLKAVIHFVPWGTGG-MSLELMRRDRSADPGMNELLIVAALQAAPGLG 493 Query 400 VQRLSLAFAAFPDLFGANQ---LGRLQRVCRALIHILDPLIALESLYRYLRKFHALDERR 456 V+R+SL FA F + G + R+ R L+ L +ESLY++ KF E R Sbjct 494 VERVSLNFAMFRSALARGEKIGAGPVLRMWRGLLVFLSRWFQIESLYKFNAKFRPRWEPR 553 Query 457 YVLISMTQ 464 +V+ T+ Sbjct 554 FVVFPTTR 561 >gi|254385657|ref|ZP_05000980.1| integral membrane lysyl-tRNA synthetase [Streptomyces sp. Mg1] gi|194344525|gb|EDX25491.1| integral membrane lysyl-tRNA synthetase [Streptomyces sp. Mg1] Length=616 Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 101/312 (33%), Positives = 151/312 (49%), Gaps = 24/312 (7%) Query 167 DSLAPFAMQAGKSHHFSAAGTAALAYRTRIGYAVVSGDPIGDEAQFPQLVADFAAMCHMH 226 DSL FA++ K+ FS +G AA+ YR G + SGDPIGD +P + F H Sbjct 260 DSLGHFALRRDKAVVFSPSGKAAVTYRVVSGVMLASGDPIGDVEAWPGAIERFMEEAKAH 319 Query 227 GWRIVVVGCSERRLGLWSDPMVVGQSLRPIPIGRDVVIDVSNFEMTGRRFRNLRQAVKRT 286 W V+GCSE +W+ L + +G + ++DV +F ++GR RN+RQ VKR Sbjct 320 SWTPAVMGCSETGGEVWTRE----TGLDALELGDEAIVDVKDFSLSGRAMRNVRQMVKRI 375 Query 287 HNFGVTTEIVAEQQLDDQRQAELAEVLAASPS--GARTDRGFCMNLDGVLEGRYPGI-QL 343 G TT++ +L D EL +V A+ + G T+RGF M L V + PG Sbjct 376 ERNGYTTKVRRVSELTD---TELEQVRGAAAAWRGTDTERGFSMALGRVGD---PGDGDC 429 Query 344 IIA---RDASGRVQGFHR-----YATAGGGSDMSLDVPWRRRGAPNGIDERLSADMIAAA 395 IA R G F + G MSL++ R R A G++E L + A+ Sbjct 430 FIATAHRVEEGDTSPFGDLKAVLHFVPWGKDGMSLELMRRDRAADPGMNELLIVASLEAS 489 Query 396 KDAGVQRLSLAFAAFPDLFGANQ---LGRLQRVCRALIHILDPLIALESLYRYLRKFHAL 452 G++++SL FA F + G + R+ R+L+ L +ESLY++ KF Sbjct 490 PSLGIEKVSLNFAMFRSALARGEKIGAGPVLRMWRSLLVFLSRWFQIESLYKFNAKFKPR 549 Query 453 DERRYVLISMTQ 464 E R+V+ T+ Sbjct 550 WEPRFVVFRTTR 561 >gi|297159336|gb|ADI09048.1| hypothetical protein SBI_05928 [Streptomyces bingchenggensis BCW-1] Length=583 Score = 130 bits (326), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 110/356 (31%), Positives = 163/356 (46%), Gaps = 31/356 (8%) Query 129 LGEILIAGSGWALMWPTSAHPR--PEDLPRVWALINA-TRADSLAPFAMQAGKSHHFSAA 185 LG + +A + + P R P D R+ L+ A R DSL FA++ K FS + Sbjct 188 LGLLTVATTAYLAFRPEHPAARLTPADEERLRDLLAAHGRRDSLGHFALRRDKGVVFSPS 247 Query 186 GTAALAYRTRIGYAVVSGDPIGDEAQFPQLVADFAAMCHMHGWRIVVVGCSERRLGLWSD 245 G AA+ YR G + SGDP+GD +P ++ F H W V+GCSE +W+ Sbjct 248 GKAAVCYRVVSGVMLASGDPVGDVEAWPGAISRFMEEARAHSWTPAVMGCSETGGEVWTR 307 Query 246 PMVVGQSLRPIPIGRDVVIDVSNFEMTGRRFRNLRQAVKRTHNFGVTTEI-----VAEQQ 300 L + +G + ++DV++F ++GR RN+RQ VKR G T + ++E + Sbjct 308 E----TGLDALELGDEAIVDVADFTLSGRAMRNVRQMVKRIERAGYETRVRRASDLSEDE 363 Query 301 LDDQRQAELAEVLAASPSGARTDRGFCMNL---------DGVLEGRYPGIQLIIARDASG 351 L RQA AA G T+RGF M L D V+ + + G Sbjct 364 LGTIRQA------AADWRGTDTERGFSMALGRIGDPADGDSVIATAHKAPEEGAEPGPYG 417 Query 352 RVQGFHRYATAGGGSDMSLDVPWRRRGAPNGIDERLSADMIAAAKDAGVQRLSLAFAAFP 411 ++ + G MSLD+ R R A G++E L + AA GV R+SL FA F Sbjct 418 DLKAVLHF-VPWGRDGMSLDLMRRDRSADPGMNELLIVASLQAAGGLGVGRVSLNFAMFR 476 Query 412 DLFGANQ---LGRLQRVCRALIHILDPLIALESLYRYLRKFHALDERRYVLISMTQ 464 + G + R R L+ L +ESLY++ KF E R+V+ T+ Sbjct 477 SALARGEKLGAGPVLRGWRGLLVFLSRWFQIESLYKFNAKFQPRWEPRFVVFRNTR 532 >gi|336179328|ref|YP_004584703.1| hypothetical protein FsymDg_3493 [Frankia symbiont of Datisca glomerata] gi|334860308|gb|AEH10782.1| hypothetical protein FsymDg_3493 [Frankia symbiont of Datisca glomerata] Length=597 Score = 129 bits (325), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 107/343 (32%), Positives = 160/343 (47%), Gaps = 22/343 (6%) Query 129 LGEILIAGSGWALMWPTSAHPR--PEDLPRVWALI-NATRADSLAPFAMQAGKSHHFSAA 185 +G + I + + + P PR ED RV AL+ ADSL F +++ KS +S Sbjct 191 MGVLTIGTTAYLALRPPEPRPRLTDEDEARVRALLARHGDADSLGYFVLRSDKSVVWSPT 250 Query 186 GTAALAYRTRIGYAVVSGDPIGDEAQFPQLVADFAAMCHMHGWRIVVVGCSERRLGLWSD 245 G A +AYR G + SGDP+GD +P + +F H W V+GCSE W+ Sbjct 251 GKACVAYRVVSGVMLASGDPLGDREAWPGAIREFLREAADHAWTPAVIGCSEAGGIAWTR 310 Query 246 PMVVGQSLRPIPIGRDVVIDVSNFEMTGRRFRNLRQAVKRTHNFGVTTEIVAEQQLDDQR 305 L + G + V++ + F + GR RN+RQAV R G T + Q++ D Sbjct 311 -----AGLSVLEFGDEAVLETTGFTLEGRTMRNVRQAVARVERAGYTAIV---QRISDLE 362 Query 306 QAELAEVLA--ASPSGARTDRGFCMNLDGVLEGRYPGIQLIIA-----RDASGRVQGFHR 358 ++A + A A G T+RGF M L + + +++A A R++ Sbjct 363 PRDVARLRAQVAVWRGTETERGFSMALGRIGDAADGDCVVVMAFSAEPHGAEPRLRAVLH 422 Query 359 YATAGGGSDMSLDVPWRRRGAPNGIDERLSADMIAAAKDAGVQRLSLAFAAFPDLFGANQ 418 + G + +SLD R R A NG++E L + A+D GV+RLSL FA F + Sbjct 423 F-VPWGRTGLSLDAMMRDRTADNGLNEFLIVSAVRRARDLGVKRLSLNFAVFRSALERGE 481 Query 419 ---LGRLQRVCRALIHILDPLIALESLYRYLRKFHALDERRYV 458 G + R R L+ L ++SLYR+ KF RYV Sbjct 482 RLGAGPVLRSWRGLLMFLSRWFQIDSLYRFNAKFQPTWLSRYV 524 >gi|297161202|gb|ADI10914.1| integral membrane protein [Streptomyces bingchenggensis BCW-1] Length=597 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 91/300 (31%), Positives = 140/300 (47%), Gaps = 10/300 (3%) Query 167 DSLAPFAMQAGKSHHFSAAGTAALAYRTRIGYAVVSGDPIGDEAQFPQLVADFAAMCHMH 226 DSL FA++ KS +S G +A+ YR G ++ SGDPIGD +P + + H Sbjct 263 DSLGYFALRHDKSVIWSPTGKSAVTYRVLSGVSLASGDPIGDPEAWPGAIERWLTEAREH 322 Query 227 GWRIVVVGCSERRLGLWSDPMVVGQSLRPIPIGRDVVIDVSNFEMTGRRFRNLRQAVKRT 286 GW V+G SE + L + +G + ++D F + GR R +RQA R Sbjct 323 GWTPAVIGASEE-----GGTVYARHGLDALELGDEAIVDTEEFTLEGRAMRTVRQAYNRV 377 Query 287 HNFGVTTEIVAEQQLDDQRQAELAEVLAASPSGARTDRGFCMNLDGVLEGRYPGIQLIIA 346 G T I + + ++ AEL LA T+RGF M L + + L+ Sbjct 378 KRAGYTVRIRHHEDIPEEEMAELLR-LADDWRDGETERGFSMALGRLGDPADGRCVLLDC 436 Query 347 RDASGRVQGFHRYATAGGGSDMSLDVPWRRRGAPNGIDERLSADMIAAAKDAGVQRLSLA 406 D GR + +A G +SLD+ R R + NG+ E + ++I AK+ G ++SL Sbjct 437 ADRDGRPRAMLSFA-PWGSHGLSLDLMRRDRDSDNGLMEFMVLELIQRAKEVGADQISLN 495 Query 407 FAAFPDLFGANQ---LGRLQRVCRALIHILDPLIALESLYRYLRKFHALDERRYVLISMT 463 FA F +F G + R+ R+L+ +ESLYR K+ + E RY+L + Sbjct 496 FAVFRSVFERGSRLGAGPVLRLWRSLLSFFSRWWQIESLYRANAKYRPIWEPRYLLFEKS 555 >gi|337769039|emb|CCB77752.1| Integral membrane protein [Streptomyces cattleya NRRL 8057] Length=594 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 101/319 (32%), Positives = 159/319 (50%), Gaps = 15/319 (4%) Query 152 EDLPRVWALINATRA-DSLAPFAMQAGKSHHFSAAGTAALAYRTRIGYAVVSGDPIGDEA 210 +D R+ AL++ A DSL FA++ KS FS +G AA+ YR G + SGDPIGD Sbjct 256 DDEDRLRALLDKHGARDSLGYFALRRDKSVIFSPSGKAAITYRVVGGVTLASGDPIGDVE 315 Query 211 QFPQLVADFAAMCHMHGWRIVVVGCSERRLGLWSDPMVVGQSLRPIPIGRDVVIDVSNFE 270 +P + + A H W V+G SE +++ L + +G + +++ ++F Sbjct 316 AWPGAIDAWLAEAREHAWIPAVMGASEEGGNVYAR-----HGLDALELGDEAIVETADFT 370 Query 271 MTGRRFRNLRQAVKRTHNFGVTTEIVAEQQLDDQRQAELAEVLAASP--SGARTDRGFCM 328 + GR R +RQA R G TT I ++ D E+AE+LAA+ +T+RGF M Sbjct 371 LEGRAMRGVRQAYNRIKRAGYTTRI---RRHTDIPAEEMAELLAAADRWRDGQTERGFSM 427 Query 329 NLDGVLEGRYPGIQLIIARDASGRVQGFHRYATAGGGSDMSLDVPWRRRGAPNGIDERLS 388 L + + ++ DA G ++ + G +SLD+ R R + NG+ E + Sbjct 428 ALGRLGDPADGQCVMVECHDAEGELRALLSF-VPWGPKGLSLDLMRRDRNSDNGLVEFMV 486 Query 389 ADMIAAAKDAGVQRLSLAFAAFPDLF--GAN-QLGRLQRVCRALIHILDPLIALESLYRY 445 D+I + GV+RLSL FA F +F GA G + R+ R+ + LESLYR Sbjct 487 LDLIQGSAQVGVERLSLNFAMFRSVFEQGARLGAGPVLRMWRSALMFFSRWWQLESLYRA 546 Query 446 LRKFHALDERRYVLISMTQ 464 K+ + E R++L + Sbjct 547 NAKYRPIWEPRFLLFEKSS 565 >gi|312197856|ref|YP_004017917.1| membrane protein with lysine transferase activity [Frankia sp. EuI1c] gi|311229192|gb|ADP82047.1| putative membrane protein with lysine transferase activity [Frankia sp. EuI1c] Length=667 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 115/370 (32%), Positives = 172/370 (47%), Gaps = 21/370 (5%) Query 119 LAAHVLVADLLGEILIAGSGWALMWPTSAHPR--PEDLPRVWALINA-TRADSLAPFAMQ 175 LA VL+A +G + + +G+ + P PR ED RV L++ ADSL FA++ Sbjct 265 LATRVLLA--MGGLTVVTTGYLALRPPQPRPRLTDEDEMRVRDLLDRHGDADSLGYFALR 322 Query 176 AGKSHHFSAAGTAALAYRTRIGYAVVSGDPIGDEAQFPQLVADFAAMCHMHGWRIVVVGC 235 KS +S G A +A+R G + SGDP+GD +P + +F H W V+GC Sbjct 323 RDKSVIWSPTGKAGVAFRVVSGVMLASGDPLGDSEAWPAAIKEFLREAADHAWTPAVIGC 382 Query 236 SERRLGLWSDPMVVGQSLRPIPIGRDVVIDVSNFEMTGRRFRNLRQAVKRTHNFGVTTEI 295 S+ +W L + +G + VID ++F + GR RN+RQA R G T Sbjct 383 SQAGAVVWKR-----TGLSVLELGDEAVIDTASFTLQGRSMRNVRQATGRVERAGYTA-- 435 Query 296 VAEQQLD-DQRQAELAEVLAASPSGARTDRGFCM---NLDGVLEGRYPGIQLIIARDASG 351 +A + D +AE AA+ GA T+RGF M L +G + + A G Sbjct 436 LARRMRDIPPDEAEQLTRKAAAWRGAETERGFSMALGRLGDTADGDCVAVTALRADPDGG 495 Query 352 RVQGFH-RYATAGGGSDMSLDVPWRRRGAPNGIDERLSADMIAAAKDAGVQRLSLAFAAF 410 Q + G + +SLD R R A NG++E L + A D GV ++SL FA Sbjct 496 EPQPRALLHFVPWGHTGLSLDAMLRDRSADNGLNEFLIVHTLCHAADLGVTKVSLNFAFL 555 Query 411 PDLFGANQ---LGRLQRVCRALIHILDPLIALESLYRYLRKFHALDERRYVLI-SMTQVF 466 + G R R L+ L ++SLYR+ KF + + RY+ + T + Sbjct 556 RSALEHGERLGAGPFIRGWRGLLLFLSRWFQIDSLYRFNAKFQPVWQPRYICYPASTDLP 615 Query 467 ALALVLLSLE 476 +AL +L E Sbjct 616 RIALAMLEAE 625 >gi|21224696|ref|NP_630475.1| integral membrane lysyl-tRNA synthetase [Streptomyces coelicolor A3(2)] gi|3218336|emb|CAA19595.1| putative integral membrane lysyl-tRNA synthetase [Streptomyces coelicolor A3(2)] Length=589 Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 95/317 (30%), Positives = 154/317 (49%), Gaps = 12/317 (3%) Query 151 PEDLPRVWALIN-ATRADSLAPFAMQAGKSHHFSAAGTAALAYRTRIGYAVVSGDPIGDE 209 PEDL + AL+ DSL FA++ KS +S +G AA+ YR G ++ SGDPIGD Sbjct 243 PEDLRGLRALLERHGERDSLGYFALRCDKSVIWSPSGKAAITYRVVSGVSLASGDPIGDP 302 Query 210 AQFPQLVADFAAMCHMHGWRIVVVGCSERRLGLWSDPMVVGQSLRPIPIGRDVVIDVSNF 269 +P+ + + A +GW V+G SE + L + +G + ++D+S F Sbjct 303 EAWPRAIDRWLAQAREYGWAPAVIGASEE-----GGTVYARHGLNALELGDEAIVDLSEF 357 Query 270 EMTGRRFRNLRQAVKRTHNFGVTTEIVAEQQLDDQRQAELAEVLAASPSGARTDRGFCMN 329 + GR RN+RQA R G + I + + Q A+L L + ++RGF M Sbjct 358 TLEGRAMRNVRQAYNRIERAGYSVWIRRHKDIPTQEMADLIR-LVDEWRDSESERGFSMA 416 Query 330 LDGVLEGRYPGIQLIIARDASGRVQGFHRYATAGGGSDMSLDVPWRRRGAPNGIDERLSA 389 L + + + +++ D R +G + G +SLD+ R R + NG+ E + Sbjct 417 LGRLGDPQDGQCVMVLCHDGK-RPRGLLSF-VPWGDDGLSLDLMRRDRDSENGLFEFMVL 474 Query 390 DMIAAAKDAGVQRLSLAFAAFPDLFGANQ---LGRLQRVCRALIHILDPLIALESLYRYL 446 +I A + G+++LSL FA F +F G + R+ R+L+ +ESLYR Sbjct 475 KLIQQAGELGMRQLSLNFAMFRSVFERGSRLGAGPVLRLWRSLLSFFSRWWQIESLYRAN 534 Query 447 RKFHALDERRYVLISMT 463 K+ + E RY+L + Sbjct 535 AKYRPIWEPRYLLFEKS 551 >gi|290958419|ref|YP_003489601.1| protein [Streptomyces scabiei 87.22] gi|260647945|emb|CBG71050.1| putative integral membrane protein [Streptomyces scabiei 87.22] Length=605 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 99/309 (33%), Positives = 147/309 (48%), Gaps = 19/309 (6%) Query 167 DSLAPFAMQAGKSHHFSAAGTAALAYRTRIGYAVVSGDPIGDEAQFPQLVADFAAMCHMH 226 DSL FA++ K+ FS +G AA+ YR G + SGDPIGD +P + F H Sbjct 254 DSLGHFALRRDKAVVFSPSGKAAVTYRVVSGVMLASGDPIGDVEAWPGAIERFMDEAKAH 313 Query 227 GWRIVVVGCSERRLGLWSDPMVVGQSLRPIPIGRDVVIDVSNFEMTGRRFRNLRQAVKRT 286 W V+GCSE +W+ L + +G + V+DV++F + GR RN+RQ VKR Sbjct 314 SWTPAVMGCSETGAEVWTRE----TGLDALELGDEAVVDVADFSLAGRAMRNVRQMVKRI 369 Query 287 HNFGVTTEIVAEQQLDDQRQAELAEVLAASPS--GARTDRGFCMNLDGVLEGRYPGIQLI 344 G T + +++ D +AEL + A+ G T+RGF M L G + G LI Sbjct 370 ERLGYETRV---RRVRDLGEAELERIRRAAEDWRGTDTERGFSMAL-GRVGDPADGDCLI 425 Query 345 IARDASGRVQGFHR------YATAGGGSDMSLDVPWRRRGAPNGIDERLSADMIAAAKDA 398 + G + + G SLD+ R R A G++E L + AA Sbjct 426 ATAHRADETPGAYGDLKAVLHFVPWGPDGASLDLMRRDRSADPGMNELLIVAALEAAPRL 485 Query 399 GVQRLSLAFAAFPDLFGANQ---LGRLQRVCRALIHILDPLIALESLYRYLRKFHALDER 455 GV+R+SL FA F + G + R R L+ L +ESLY++ KF E Sbjct 486 GVERVSLNFAMFRSALARGEKIGAGPVLRAWRGLLVFLSRWFQIESLYKFNAKFRPRWEP 545 Query 456 RYVLISMTQ 464 R+V+ + ++ Sbjct 546 RFVVYAASR 554 >gi|309810941|ref|ZP_07704741.1| lysine--tRNA ligase [Dermacoccus sp. Ellin185] gi|308435095|gb|EFP58927.1| lysine--tRNA ligase [Dermacoccus sp. Ellin185] Length=1055 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 95/294 (33%), Positives = 143/294 (49%), Gaps = 10/294 (3%) Query 160 LINATRADSLAPFAMQAGKSHHFSAAGTAALAYRTRIGYAVVSGDPIGDEAQFPQLVADF 219 L+ DSL FA + K+ F+ G AA+ +R +V S DPIG + +A + Sbjct 201 LLEHGEDDSLGYFATRRDKAVVFAPDGRAAVTFRNEGSVSVASADPIGRAESWDDAIAVW 260 Query 220 AAMCHMHGWRIVVVGCSERRLGLWSDPMVVGQSLRPIPIGRDVVIDVSNFEMTGRRFRNL 279 C HG V+ S R + + L+ +G + +ID F + GR R + Sbjct 261 LGQCREHGLYPAVLSASTRGARAY-----IEAGLKAWSLGDEAIIDTDTFSLRGRSMRPV 315 Query 280 RQAVKRTHNFGVTTEIVAEQQLDDQRQAELAEVLAASPSGARTDRGFCMNLDGVLEGRYP 339 RQAV R G TT++ +L D AEL+ LA G T+RGF M L+ + + Sbjct 316 RQAVTRVERCGYTTQVRRHDELGDDELAELSR-LADKWRGNETERGFSMALNRLGDRADG 374 Query 340 GIQLIIARDASGRVQGFHRYATAGGGSDMSLDVPWRRRGAPNGIDERLSADMIAAAKDAG 399 +I A DA G V+GF + G +SLD+ R R A NG++E + + AA G Sbjct 375 RCVVITAHDARGAVRGFLSF-VPWGSRGLSLDLMRRDRQAENGLNEFMVTHLAEAAPALG 433 Query 400 VQRLSLAFAAFPDLFG-ANQLGR--LQRVCRALIHILDPLIALESLYRYLRKFH 450 ++R+SL FA F ++F A+++G + RV + I LE+LYR K+H Sbjct 434 IRRISLNFAVFRNVFADADEVGAGPITRVTDKALSIASKFWQLETLYRSNDKYH 487 >gi|111223635|ref|YP_714429.1| putative membrane protein with lysine transferase activity [Frankia alni ACN14a] gi|111151167|emb|CAJ62877.1| Putative membrane protein with lysine transferase activity [Frankia alni ACN14a] Length=611 Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 120/397 (31%), Positives = 175/397 (45%), Gaps = 44/397 (11%) Query 116 LAGLAAHVLVADLLGEILIAGSGWALMWPTSAHPR--PEDLPRVWALI-NATRADSLAPF 172 A LA VL+ LG + I +G+ + P PR ED RV AL+ ADSL F Sbjct 180 FADLADRVLLT--LGVVTIGTTGYLALRPPQPRPRLTEEDRARVRALLARHGDADSLGYF 237 Query 173 AMQAGKSHHFSAAGTAALAYRTRIGYAVVSGDPIGDEAQFPQLVADFAAMCHMHGWRIVV 232 +++ KS +S +G A +AYR G + SGDP+GD +P + +F H W V Sbjct 238 VLRSDKSVIWSPSGKACVAYRVVSGVMLASGDPLGDREAWPGAIREFLREAADHAWTPAV 297 Query 233 VGCSERRLGLWSDPMVVGQSLRPIPIGRDVVIDVSNFEMTGRRFRNLRQAVKRTHNFGVT 292 +GCSE W+ L + G + V+D + F + GR RN+RQAV R G T Sbjct 298 IGCSEAGGTAWTR-----AGLTALEFGDEAVVDAATFTLDGRAMRNVRQAVARVERAGYT 352 Query 293 TEIVAEQQLDDQRQAELAEVLAASPSGARTDRGFCMNLDGVLEGRYPGIQLIIARDASGR 352 + L A L + AA+ G+ T+RGF M L + +G +++A ++ R Sbjct 353 AVARRVRDLAPPDVARL-KAQAAAWRGSETERGFSMALGRLGDGEDGDCVVVLAYESPAR 411 Query 353 VQGFHRY-----------ATAGGGSD------------------MSLDVPWRRRGAPNGI 383 G + AG SD +SLD R R A NG+ Sbjct 412 DAGTGAAPDGSASAVGIPSAAGISSDAEPRLRALLHFVPWGRDGLSLDAMRRDRAADNGL 471 Query 384 DERLSADMIAAAKDAGVQRLSLAFAAFPDLFGANQ---LGRLQRVCRALIHILDPLIALE 440 +E L + A GV R+SL FA F + G + R R + L ++ Sbjct 472 NEFLIVSTLRQAPQLGVARVSLNFAFFRSALERGERLGAGPVVRSWRGTLMFLSRWFQID 531 Query 441 SLYRYLRKFHALDERRYVLI-SMTQVFALALVLLSLE 476 SLYR+ KF + R+V S ++ +AL +L E Sbjct 532 SLYRFNAKFQPTWQPRFVCYPSTAELPRIALAMLEAE 568 >gi|294630634|ref|ZP_06709194.1| lysyl-tRNA synthetase [Streptomyces sp. e14] gi|292833967|gb|EFF92316.1| lysyl-tRNA synthetase [Streptomyces sp. e14] Length=603 Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 104/320 (33%), Positives = 150/320 (47%), Gaps = 20/320 (6%) Query 152 EDLPRVWALI-NATRADSLAPFAMQAGKSHHFSAAGTAALAYRTRIGYAVVSGDPIGDEA 210 ED ++ AL+ R DSL FA++ K+ FS +G AA+ YR G + SGDPIGD Sbjct 239 EDEGKLRALLAKHGRRDSLGHFALRRDKAVVFSPSGKAAVTYRVVSGVMLASGDPIGDVE 298 Query 211 QFPQLVADFAAMCHMHGWRIVVVGCSERRLGLWSDPMVVGQSLRPIPIGRDVVIDVSNFE 270 +P + F H W VVGCSE +W+ L + +G + V+DV++F Sbjct 299 AWPGAIERFMDEAKAHSWTPAVVGCSETGGEVWTRE----TGLDALELGDEAVVDVADFS 354 Query 271 MTGRRFRNLRQAVKRTHNFGVTTEIVAEQQLDDQRQAELAEVLAASPS--GARTDRGFCM 328 + GR RN+RQ VKR G T + +++ D AEL + A+ G T+RGF M Sbjct 355 LAGRAMRNVRQMVKRIERAGYETRV---RRIRDLSDAELERIRRAAEDWRGTDTERGFSM 411 Query 329 NLDGVLEGRYPGIQLIIA----RDASGRVQGFHR--YATAGGGSDMSLDVPWRRRGAPNG 382 L G + G LI D G + G SL++ R R A G Sbjct 412 AL-GRIGDPSDGDCLIATAHKQDDEPGEFGDLKAIIHFVPWGPDGASLELMRRDRSADPG 470 Query 383 IDERLSADMIAAAKDAGVQRLSLAFAAFPDLFGANQ---LGRLQRVCRALIHILDPLIAL 439 ++E L + AA G++R+SL FA F + G + R R L+ L + Sbjct 471 MNELLIVATLQAAPKLGIERISLNFAMFRSALARGEKIGAGPVLRAWRGLLVFLSRWFQI 530 Query 440 ESLYRYLRKFHALDERRYVL 459 ESLY++ KF E RY++ Sbjct 531 ESLYKFNAKFQPRWEPRYIV 550 >gi|302535209|ref|ZP_07287551.1| integral membrane lysyl-tRNA synthetase [Streptomyces sp. C] gi|302444104|gb|EFL15920.1| integral membrane lysyl-tRNA synthetase [Streptomyces sp. C] Length=617 Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 97/307 (32%), Positives = 151/307 (50%), Gaps = 24/307 (7%) Query 167 DSLAPFAMQAGKSHHFSAAGTAALAYRTRIGYAVVSGDPIGDEAQFPQLVADFAAMCHMH 226 DSL FA++ K+ FS +G AA+ YR G + SGDP+GD +P + F H Sbjct 260 DSLGHFALRRDKAVVFSPSGKAAVTYRVVSGVMLASGDPVGDVEAWPGAIERFMEEAKAH 319 Query 227 GWRIVVVGCSERRLGLWSDPMVVGQSLRPIPIGRDVVIDVSNFEMTGRRFRNLRQAVKRT 286 W VVGCSE +W+ L + +G + ++DV +F ++GR RN+RQ VKR Sbjct 320 SWTPAVVGCSETGGEVWTRE----TGLDALELGDEAIVDVKDFSLSGRPMRNVRQMVKRI 375 Query 287 HNFGVTTEIVAEQQLDDQRQAELAEVLAASPS--GARTDRGFCMNLDGVLEGRYPGI-QL 343 G TT++ +++ + + EL++V AS + G T+RGF M L + + PG Sbjct 376 ERNGYTTKV---RRVSELNEFELSQVRRASEAWRGTDTERGFSMALGRIGD---PGDGDC 429 Query 344 IIA---RDASGRVQGFH-----RYATAGGGSDMSLDVPWRRRGAPNGIDERLSADMIAAA 395 IIA R G F ++ G MSL++ R R A G++E L + A Sbjct 430 IIATAHRVEEGDTSPFGDLKAIQHFVPWGKDGMSLEMMRRDRAADPGMNELLIVASLQQA 489 Query 396 KDAGVQRLSLAFAAFPDLFGANQ---LGRLQRVCRALIHILDPLIALESLYRYLRKFHAL 452 + ++++SL FA F + G + R R L+ L +ESLY++ KF Sbjct 490 PELNIEKVSLNFAMFRAALARGEKIGAGPVLRAWRGLLVFLSRWFQIESLYKFNEKFRPR 549 Query 453 DERRYVL 459 E R+++ Sbjct 550 WEPRFMV 556 >gi|302544360|ref|ZP_07296702.1| putative lysyl-tRNA synthetase [Streptomyces hygroscopicus ATCC 53653] gi|302461978|gb|EFL25071.1| putative lysyl-tRNA synthetase [Streptomyces himastatinicus ATCC 53653] Length=610 Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 98/324 (31%), Positives = 145/324 (45%), Gaps = 42/324 (12%) Query 165 RADSLAPFAMQAGKSHHFSAAGTAALAYRTRIGYAVVSGDPIGDEAQFPQLVADFAAMCH 224 R DSL FA++ K+ FS +G +A+ YR G + SGDP+GD +P +A F Sbjct 255 RRDSLGHFALRRDKAVIFSPSGKSAVCYRVVSGVMLASGDPVGDVEAWPGAIAAFMEEAR 314 Query 225 MHGWRIVVVGCSERRLGLWSDPMVVGQSLRPIPIGRDVVIDVSNFEMTGRRFRNLRQAVK 284 H W V+GCSE +W+ L + +G + ++DV++F ++GR RN+RQ VK Sbjct 315 AHSWTPAVMGCSETGGEVWTRE----TGLDALELGDEAIVDVADFTLSGRAMRNVRQMVK 370 Query 285 RTHNFGVTTEIVAEQQLDDQRQAELAEVLAASPSGARTDRGFCMNL-------------- 330 R G T + LD + + E A G T+RGF M L Sbjct 371 RIERAGYETRVRRVADLDAE-ELETVRRAAEDWRGTDTERGFSMALGRIGDPADGESVIA 429 Query 331 -------DGVLEGRYPGIQLIIARDASGRVQGFHRYATAGGGSDMSLDVPWRRRGAPNGI 383 +G EG Y ++ ++ + G MSLD+ R R A G+ Sbjct 430 TAHKAAEEGAEEGPYGDLKAVL-------------HFVPWGADGMSLDLMRRDRSADPGM 476 Query 384 DERLSADMIAAAKDAGVQRLSLAFAAFPDLFGANQ---LGRLQRVCRALIHILDPLIALE 440 +E L + AA GV R+SL FA F + G + R R L+ L +E Sbjct 477 NELLIVASLQAAPALGVTRVSLNFAMFRSALARGEKLGAGPVLRGWRGLLVFLSRWFQIE 536 Query 441 SLYRYLRKFHALDERRYVLISMTQ 464 SLY++ KF E R+V+ T+ Sbjct 537 SLYKFNAKFRPRWEPRFVVFRNTR 560 >gi|297201407|ref|ZP_06918804.1| integral membrane lysyl-tRNA synthetase [Streptomyces sviceus ATCC 29083] gi|197713815|gb|EDY57849.1| integral membrane lysyl-tRNA synthetase [Streptomyces sviceus ATCC 29083] Length=603 Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 108/326 (34%), Positives = 153/326 (47%), Gaps = 20/326 (6%) Query 146 SAHPRPEDLPRVWALINATRA-DSLAPFAMQAGKSHHFSAAGTAALAYRTRIGYAVVSGD 204 +AH ED R+ AL+ DSL FA++ K+ FS +G AA+ YR G + SGD Sbjct 233 AAHLTEEDESRLRALLAKHGGRDSLGHFALRRDKAVVFSPSGKAAVTYRVVSGVMLASGD 292 Query 205 PIGDEAQFPQLVADFAAMCHMHGWRIVVVGCSERRLGLWSDPMVVGQSLRPIPIGRDVVI 264 PIGD +P + F H W V+GCSE +W+ L + +G + V+ Sbjct 293 PIGDVEAWPGAIERFMDEAKAHSWTPAVMGCSETGGEVWTRE----TGLDALELGDEAVV 348 Query 265 DVSNFEMTGRRFRNLRQAVKRTHNFGVTTEIVAEQQLDDQRQAELAEVLAASPS--GART 322 DV++F + GR RN+RQ VKR G T + +++ D + ELA V A+ G T Sbjct 349 DVADFSLAGRAMRNVRQMVKRIERAGYETRV---RRVRDLGETELARVRQAADDWRGTDT 405 Query 323 DRGFCMNLDGVLEGRYPGIQLII----ARDASGRVQGFHR--YATAGGGSDMSLDVPWRR 376 +RGF M L G + G LI A D G + G SLD+ R Sbjct 406 ERGFSMAL-GRIGDLADGDCLIATAHKADDQPGPYGDLKAILHFVPWGTDGASLDLMRRD 464 Query 377 RGAPNGIDERLSADMIAAAKDAGVQRLSLAFAAFPDLFGANQ---LGRLQRVCRALIHIL 433 R A G++E L + AA G+ R+SL FA F + G + R R L+ L Sbjct 465 RSADPGMNELLIVAALQAAPKFGITRVSLNFAMFRSALARGEKIGAGPVLRAWRGLLVFL 524 Query 434 DPLIALESLYRYLRKFHALDERRYVL 459 +ESLY++ KF E R+V+ Sbjct 525 SRWFQIESLYKFNAKFQPRWEPRFVV 550 >gi|302553177|ref|ZP_07305519.1| integral membrane lysyl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736] gi|302470795|gb|EFL33888.1| integral membrane lysyl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736] Length=597 Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 107/330 (33%), Positives = 154/330 (47%), Gaps = 28/330 (8%) Query 146 SAHPRPEDLPRVWALINATRA-DSLAPFAMQAGKSHHFSAAGTAALAYRTRIGYAVVSGD 204 +AH ED R+ AL++ DSL FA++ K+ FS +G AA+ YR G + SGD Sbjct 225 AAHLTEEDEARLRALLDKHGGRDSLGHFALRRDKAVVFSPSGKAAVTYRVVSGVMLASGD 284 Query 205 PIGDEAQFPQLVADFAAMCHMHGWRIVVVGCSERRLGLWSDPMVVGQSLRPIPIGRDVVI 264 PIGD +P + F H W V+GCSE +W+ L + +G + V+ Sbjct 285 PIGDVEAWPGAIEQFMDEAKAHSWTPAVMGCSETGGEVWTRE----TGLDALELGDEAVV 340 Query 265 DVSNFEMTGRRFRNLRQAVKRTHNFGVTTEIVAEQQLDDQRQAELAEVLAASPS--GART 322 DV +F + GR RN+RQ VKR G T + +++ D +AEL + A+ G T Sbjct 341 DVKDFSLAGRAMRNVRQMVKRIERAGYETRV---RRVRDLGEAELERIRGAADDWRGTDT 397 Query 323 DRGFCMNLDGVLEGRYPGIQLIIARDASGRVQGFHR----------YATAGGGSDMSLDV 372 +RGF M L G + G LI A+ Q H + G SLD+ Sbjct 398 ERGFSMAL-GRVGDPADGDCLI----ATAHKQDDHPGPYGDLKAILHFVPWGTDGASLDL 452 Query 373 PWRRRGAPNGIDERLSADMIAAAKDAGVQRLSLAFAAFPDLFGANQ---LGRLQRVCRAL 429 R R A G++E L + AA G+ R+SL FA F + G + R R L Sbjct 453 MRRDRTADPGMNELLIVAALQAAPKLGITRVSLNFAMFRAALARGEKIGAGPVLRAWRGL 512 Query 430 IHILDPLIALESLYRYLRKFHALDERRYVL 459 + L +ESLY++ KF E R+V+ Sbjct 513 LVFLSRWFQIESLYKFNAKFQPRWEPRFVV 542 >gi|256395921|ref|YP_003117485.1| hypothetical protein Caci_6803 [Catenulispora acidiphila DSM 44928] gi|256362147|gb|ACU75644.1| protein of unknown function DUF470 [Catenulispora acidiphila DSM 44928] Length=592 Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 100/341 (30%), Positives = 156/341 (46%), Gaps = 13/341 (3%) Query 124 LVADLLGEILIAGSGWALMWPTSAHPR--PEDLPRVWALINAT-RADSLAPFAMQAGKSH 180 + +L+G ++I WAL P R ED R+ L++ DSL F ++ K+ Sbjct 217 VTVNLIGSVMILAVAWALFQPRRGTYRHLAEDDDRLRTLLDKFGDQDSLGYFNLRRDKAV 276 Query 181 HFSAAGTAALAYRTRIGYAVVSGDPIGDEAQFPQLVADFAAMCHMHGWRIVVVGCSERRL 240 +S +G AA+AYR G ++ SGDPIGD +P + + A H W V+G SE Sbjct 277 VWSPSGKAAIAYRPVGGVSLASGDPIGDVEAWPGAIEAWLAEARQHAWVPAVMGASEE-- 334 Query 241 GLWSDPMVVGQSLRPIPIGRDVVIDVSNFEMTGRRFRNLRQAVKRTHNFGVTTEIVAEQQ 300 ++ L + +G + V++V F + GR R +RQA R G T I + Sbjct 335 ---GGKVLTRFGLDAVELGDEAVVEVEEFTLEGRAMRGVRQAYNRVERAGYRTRIRRHAE 391 Query 301 LDDQRQAELAEVLAASPSGARTDRGFCMNLDGVLEGRYPGIQLIIARDASGRVQGFHRYA 360 + A L G+ +RGF M L + + ++ D G ++ + Sbjct 392 IPADEMAALVRRADDWRDGS-VERGFSMALGRLGDPADGQCVMVECLDGEGALRALLSF- 449 Query 361 TAGGGSDMSLDVPWRRRGAPNGIDERLSADMIAAAKDAGVQRLSLAFAAFPDLF---GAN 417 G +SLD+ R RG NG+ E + D+I A + V+R+SL FA F +F G Sbjct 450 VPWGTKGLSLDLMRRERGTENGLVEFMVIDLIKAGPEHKVERISLNFAMFRSIFERAGRI 509 Query 418 QLGRLQRVCRALIHILDPLIALESLYRYLRKFHALDERRYV 458 G R+ R ++ + LESLYR K+ + E RY+ Sbjct 510 GAGPFLRLARVVLSVFSRWWQLESLYRANMKYRPVWEPRYL 550 >gi|152966432|ref|YP_001362216.1| hypothetical protein Krad_2476 [Kineococcus radiotolerans SRS30216] gi|151360949|gb|ABS03952.1| protein of unknown function DUF470 [Kineococcus radiotolerans SRS30216] Length=578 Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 110/334 (33%), Positives = 159/334 (48%), Gaps = 20/334 (5%) Query 127 DLLGEILIAGSGWALMWP---TSAHPRPEDLPRVWALINATRADSLAPFAMQAGKSHHFS 183 + +G + + G+GWAL P AH +D L A DSL FA++ KS FS Sbjct 219 NTIGTLALLGAGWALFGPRRDQRAHTAADDAALRRLLATAGPQDSLGYFALRPDKSLVFS 278 Query 184 AAGTAALAYRTRIGYAVVSGDPIGDEAQFPQLVADFAAMCHMHGWRIVVVGCSERRLGLW 243 A+G AA+AYRT + SGDP+G + +P+++ + + HGW V+G SER + Sbjct 279 ASGKAAIAYRTIGDVCLASGDPLGHSSAWPEVIEAWRMLLREHGWIPAVLGASERGAQAY 338 Query 244 SDPMVVGQSLRPIPIGRDVVIDVSNFEMTGRRFRNLRQAVKRTHNFGVTTEIVAEQQLDD 303 + L + +G + V+D + F + GR R+LRQAV R G++ + + + Sbjct 339 AT-----AGLDALELGDEAVVDTTTFSLEGRAVRSLRQAVNRVARTGMSVRLRRQGDVAP 393 Query 304 QRQAELAEVLAASPSGARTDRGFCMNLDGVLEGRYPG-IQLIIAR--DASGRVQGFHRYA 360 LAE LA +RGF M L V E PG L+IA DA GR + Sbjct 394 AELVRLAE-LAEHWRAGEVERGFSMALGRVGE---PGDDDLLIAECLDAQGRSCALLTF- 448 Query 361 TAGGGSDMSLDVPWRRRGAP-NGIDERLSADMIAAAKDAGVQRLSLAFAAFPDLF---GA 416 G +SLD+ R R NG+ E ++ A + GVQR+SL FA F F G Sbjct 449 VPWGRDGLSLDLMRRDRDVELNGLTEFAVTSVLTHAPELGVQRVSLNFAVFRTAFDRGGR 508 Query 417 NQLGRLQRVCRALIHILDPLIALESLYRYLRKFH 450 G + R+ R ++ LESLYR K+ Sbjct 509 LGAGPVLRLWRRVLTFGSRWWQLESLYRANVKYQ 542 Lambda K H 0.326 0.138 0.426 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1029114582640 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40