BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1621c
Length=527
Score E
Sequences producing significant alignments: (Bits) Value
gi|15608759|ref|NP_216137.1| cytochrome' transport transmembrane... 1004 0.0
gi|340626627|ref|YP_004745079.1| hypothetical protein MCAN_16291... 1003 0.0
gi|307084201|ref|ZP_07493314.1| transmembrane ATP-binding protei... 888 0.0
gi|289554605|ref|ZP_06443815.1| transmembrane ATP-binding protei... 834 0.0
gi|118464329|ref|YP_882349.1| cysteine ABC transporter ATP-bindi... 744 0.0
gi|183982438|ref|YP_001850729.1| cytochrome transmembrane ATP-bi... 743 0.0
gi|254775613|ref|ZP_05217129.1| ABC transporter, CydDC cysteine ... 742 0.0
gi|336457900|gb|EGO36893.1| cysteine export CydDC family ABC tra... 739 0.0
gi|289757723|ref|ZP_06517101.1| ABC transporter [Mycobacterium t... 739 0.0
gi|41407412|ref|NP_960248.1| CydD [Mycobacterium avium subsp. pa... 738 0.0
gi|240167998|ref|ZP_04746657.1| cytochrome transmembrane ATP-bin... 731 0.0
gi|118617246|ref|YP_905578.1| component linked with the assembly... 726 0.0
gi|289569666|ref|ZP_06449893.1| transmembrane ATP-binding protei... 725 0.0
gi|342860808|ref|ZP_08717458.1| cysteine ABC transporter ATP-bin... 711 0.0
gi|296164489|ref|ZP_06847060.1| ABC superfamily ATP binding cass... 709 0.0
gi|254820972|ref|ZP_05225973.1| CydD [Mycobacterium intracellula... 687 0.0
gi|108800004|ref|YP_640201.1| ABC transporter-like protein [Myco... 589 5e-166
gi|126435633|ref|YP_001071324.1| ABC transporter, transmembrane ... 586 3e-165
gi|118471604|ref|YP_887544.1| cysteine ABC transporter permease/... 573 2e-161
gi|6289096|gb|AAF06813.1|AF196488_3 CydD [Mycobacterium smegmati... 570 2e-160
gi|120403812|ref|YP_953641.1| ABC transporter transmembrane prot... 560 2e-157
gi|289761769|ref|ZP_06521147.1| transmembrane ATP-binding protei... 560 3e-157
gi|315444506|ref|YP_004077385.1| cysteine export CydDC family AB... 544 1e-152
gi|145224171|ref|YP_001134849.1| ABC transporter, transmembrane ... 544 2e-152
gi|169629717|ref|YP_001703366.1| ABC transporter ATP-binding pro... 526 3e-147
gi|229489007|ref|ZP_04382873.1| ABC transporter, CydDC cysteine ... 499 5e-139
gi|226308303|ref|YP_002768263.1| ABC transporter permease/ATP-bi... 499 6e-139
gi|325674770|ref|ZP_08154457.1| cysteine/glutathione ABC superfa... 499 7e-139
gi|312138312|ref|YP_004005648.1| ABC transporter ATPase [Rhodoco... 496 3e-138
gi|226364342|ref|YP_002782124.1| ABC transporter permease/ATP-bi... 483 5e-134
gi|333918385|ref|YP_004491966.1| putative ABC transporter permea... 476 5e-132
gi|111021820|ref|YP_704792.1| transport ATP-binding protein CydD... 472 7e-131
gi|262200952|ref|YP_003272160.1| ABC transporter CydDC cysteine ... 440 2e-121
gi|227495875|ref|ZP_03926186.1| ABC superfamily ATP binding cass... 410 4e-112
gi|343925906|ref|ZP_08765421.1| ABC transporter permease/ATP-bin... 406 6e-111
gi|54022554|ref|YP_116796.1| putative ABC transporter ATP-bindin... 401 2e-109
gi|326384531|ref|ZP_08206210.1| ABC transporter CydDC cysteine e... 396 6e-108
gi|269794459|ref|YP_003313914.1| cysteine ABC transporter permea... 392 5e-107
gi|329947030|ref|ZP_08294442.1| thiol reductant ABC exporter, Cy... 384 3e-104
gi|340360337|ref|ZP_08682807.1| cysteine/glutathione ABC superfa... 372 7e-101
gi|326773631|ref|ZP_08232914.1| ABC transporter, CydDC cysteine ... 370 3e-100
gi|269218647|ref|ZP_06162501.1| ABC transporter, CydDC cysteine ... 370 3e-100
gi|315604386|ref|ZP_07879452.1| ABC superfamily ATP binding cass... 367 3e-99
gi|296141242|ref|YP_003648485.1| cysteine ABC transporter permea... 366 4e-99
gi|336320292|ref|YP_004600260.1| cysteine ABC transporte permeas... 366 6e-99
gi|332670936|ref|YP_004453944.1| cysteine ABC transporter permea... 366 7e-99
gi|343521840|ref|ZP_08758806.1| thiol reductant ABC exporter, Cy... 365 1e-98
gi|227494684|ref|ZP_03925000.1| ABC superfamily ATP binding cass... 364 3e-98
gi|296130127|ref|YP_003637377.1| ABC transporter, CydDC cysteine... 363 4e-98
gi|297571634|ref|YP_003697408.1| cysteine ABC transporter permea... 362 7e-98
>gi|15608759|ref|NP_216137.1| cytochrome' transport transmembrane ATP-binding protein ABC transporter
CydD [Mycobacterium tuberculosis H37Rv]
gi|15841076|ref|NP_336113.1| ABC transporter, ATP-binding protein CydD [Mycobacterium tuberculosis
CDC1551]
gi|31792807|ref|NP_855300.1| cytochrome' transport transmembrane ATP-binding protein ABC transporter
CydD [Mycobacterium bovis AF2122/97]
66 more sequence titles
Length=527
Score = 1004 bits (2595), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 526/527 (99%), Positives = 527/527 (100%), Gaps = 0/527 (0%)
Query 1 VACGVGISGCAIGSAIVLASIVAGVIDPANPGMAGLRRWLGPLSILLVLWGLRASIQWLQ 60
+ACGVGISGCAIGSAIVLASIVAGVIDPANPGMAGLRRWLGPLSILLVLWGLRASIQWLQ
Sbjct 1 MACGVGISGCAIGSAIVLASIVAGVIDPANPGMAGLRRWLGPLSILLVLWGLRASIQWLQ 60
Query 61 ARLAQRGASAVIADLSGQVLTAVTARRPSQLAAQRDAAAVLITRGLDGLRPYFTGYLPTL 120
ARLAQRGASAVIADLSGQVLTAVTARRPSQLAAQRDAAAVLITRGLDGLRPYFTGYLPTL
Sbjct 61 ARLAQRGASAVIADLSGQVLTAVTARRPSQLAAQRDAAAVLITRGLDGLRPYFTGYLPTL 120
Query 121 LLAAILTPATVAVIGLYDLKSMAIVVITLPLIPIFMVLIGLATTNPSAAALAAMTAVQAR 180
LLAAILTPATVAVIGLYDLKSMAIVVITLPLIPIFMVLIGLATTNPSAAALAAMTAVQAR
Sbjct 121 LLAAILTPATVAVIGLYDLKSMAIVVITLPLIPIFMVLIGLATTNPSAAALAAMTAVQAR 180
Query 181 LLDLIAGIPTLRALGRASGPEQRIAELSADHRRSAMATLRIAFLSALVLELLATLGVALV 240
LLDLIAGIPTLRALGRASGPEQRIAELSADHRRSAMATLRIAFLSALVLELLATLGVALV
Sbjct 181 LLDLIAGIPTLRALGRASGPEQRIAELSADHRRSAMATLRIAFLSALVLELLATLGVALV 240
Query 241 AVGIGLRLVFGEMSLTAGLTVLLLAPEVYWPLRRVGVQFHAAADGRTAADKAFALLGESP 300
AVGIGLRLVFGEMSLTAGLTVLLLAPEVYWPLRRVGVQFHAAADGRTAADKAFALLGESP
Sbjct 241 AVGIGLRLVFGEMSLTAGLTVLLLAPEVYWPLRRVGVQFHAAADGRTAADKAFALLGESP 300
Query 301 SPTPGRRTVTARGGVIRLERLSVRGRDGRAPYDLTADIEPGRVTVLTGRNGAGKSTTLQA 360
SPTPGRRTVTARGGVIRLERLSVRGRDGRAPYDLTADIEPGRVTVLTGRNGAGKSTTLQA
Sbjct 301 SPTPGRRTVTARGGVIRLERLSVRGRDGRAPYDLTADIEPGRVTVLTGRNGAGKSTTLQA 360
Query 361 IAGLTAPSSGRITVAGVDVTNLAPAAWWRQLSWLPQRPVLVPGTVRHNLVLLGPVDDLER 420
IAGLTAPSSGRITVAGVDVTNLAPAAWWRQLSWLPQRPVLVPGTVRHNLVLLGPVDDLER
Sbjct 361 IAGLTAPSSGRITVAGVDVTNLAPAAWWRQLSWLPQRPVLVPGTVRHNLVLLGPVDDLER 420
Query 421 ACAAAGFDAVLDELPRGLDTVLGRGGVGLSLGQRQRLGLARALGSPAAVLLLDEPTAHLD 480
ACAAAGFDAVLDELPRGLDTVLGRGGVGLSLGQRQRLGLARALGSPAAVLLLDEPTAHLD
Sbjct 421 ACAAAGFDAVLDELPRGLDTVLGRGGVGLSLGQRQRLGLARALGSPAAVLLLDEPTAHLD 480
Query 481 ARTEQHVLGAIVERARAGATVLVVAHRQQVAAAGDRVVEVNSDGFRR 527
ARTEQHVLGAIVERARAGATVLVVAHRQQVAAAGDRVVEVNSDGFRR
Sbjct 481 ARTEQHVLGAIVERARAGATVLVVAHRQQVAAAGDRVVEVNSDGFRR 527
>gi|340626627|ref|YP_004745079.1| hypothetical protein MCAN_16291 [Mycobacterium canettii CIPT
140010059]
gi|340004817|emb|CCC43961.1| putative 'component linked with the assembly of cytochrome' transport
transmembrane ATP-binding protein ABC transporter CYDD
[Mycobacterium canettii CIPT 140010059]
Length=527
Score = 1003 bits (2593), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 525/527 (99%), Positives = 527/527 (100%), Gaps = 0/527 (0%)
Query 1 VACGVGISGCAIGSAIVLASIVAGVIDPANPGMAGLRRWLGPLSILLVLWGLRASIQWLQ 60
+ACGVGISGCAIGSAIVLASIVAGVIDPANPGMAGLRRWLGPLSILLVLWGLRASIQWLQ
Sbjct 1 MACGVGISGCAIGSAIVLASIVAGVIDPANPGMAGLRRWLGPLSILLVLWGLRASIQWLQ 60
Query 61 ARLAQRGASAVIADLSGQVLTAVTARRPSQLAAQRDAAAVLITRGLDGLRPYFTGYLPTL 120
ARLAQRGASAVIADLSGQVLTAVTARRPSQLAAQRDAAAVLITRGLDGLRPYFTGYLPTL
Sbjct 61 ARLAQRGASAVIADLSGQVLTAVTARRPSQLAAQRDAAAVLITRGLDGLRPYFTGYLPTL 120
Query 121 LLAAILTPATVAVIGLYDLKSMAIVVITLPLIPIFMVLIGLATTNPSAAALAAMTAVQAR 180
LLAAILTPATVAVIGLYDLKSMAIVVITLPLIPIFMVLIGLATTNPSAAALAAMTAVQAR
Sbjct 121 LLAAILTPATVAVIGLYDLKSMAIVVITLPLIPIFMVLIGLATTNPSAAALAAMTAVQAR 180
Query 181 LLDLIAGIPTLRALGRASGPEQRIAELSADHRRSAMATLRIAFLSALVLELLATLGVALV 240
LLDLIAGIPTLRALGRASGPEQRIAELSADHRRSAMATLRIAFLSALVLELLATLGVALV
Sbjct 181 LLDLIAGIPTLRALGRASGPEQRIAELSADHRRSAMATLRIAFLSALVLELLATLGVALV 240
Query 241 AVGIGLRLVFGEMSLTAGLTVLLLAPEVYWPLRRVGVQFHAAADGRTAADKAFALLGESP 300
AVGIGLRLVFGEMSLTAGLTVLLLAPEVYWPLRRVGVQFHAAADGRTAADKAFALLGESP
Sbjct 241 AVGIGLRLVFGEMSLTAGLTVLLLAPEVYWPLRRVGVQFHAAADGRTAADKAFALLGESP 300
Query 301 SPTPGRRTVTARGGVIRLERLSVRGRDGRAPYDLTADIEPGRVTVLTGRNGAGKSTTLQA 360
SPTPGRRTVTARGGVIRLERLSVRGRDGRAPYDLTADIEPGRVTVLTGRNGAGKSTTLQA
Sbjct 301 SPTPGRRTVTARGGVIRLERLSVRGRDGRAPYDLTADIEPGRVTVLTGRNGAGKSTTLQA 360
Query 361 IAGLTAPSSGRITVAGVDVTNLAPAAWWRQLSWLPQRPVLVPGTVRHNLVLLGPVDDLER 420
IAGLTAPSSGRITVAG+DVTNLAPAAWWRQLSWLPQRPVLVPGTVRHNLVLLGPVDDLER
Sbjct 361 IAGLTAPSSGRITVAGIDVTNLAPAAWWRQLSWLPQRPVLVPGTVRHNLVLLGPVDDLER 420
Query 421 ACAAAGFDAVLDELPRGLDTVLGRGGVGLSLGQRQRLGLARALGSPAAVLLLDEPTAHLD 480
ACAAAGFDAVLDELPRGLDTVLGRGGVGLSLGQRQRLGLARALGSPAAVLLLDEPTAHLD
Sbjct 421 ACAAAGFDAVLDELPRGLDTVLGRGGVGLSLGQRQRLGLARALGSPAAVLLLDEPTAHLD 480
Query 481 ARTEQHVLGAIVERARAGATVLVVAHRQQVAAAGDRVVEVNSDGFRR 527
ARTEQHVLGAIVERARAGATVLVVAHRQQVAAAGDRVVEVNSDGFRR
Sbjct 481 ARTEQHVLGAIVERARAGATVLVVAHRQQVAAAGDRVVEVNSDGFRR 527
>gi|307084201|ref|ZP_07493314.1| transmembrane ATP-binding protein ABC transporter cydD [Mycobacterium
tuberculosis SUMu012]
gi|308366171|gb|EFP55022.1| transmembrane ATP-binding protein ABC transporter cydD [Mycobacterium
tuberculosis SUMu012]
Length=502
Score = 888 bits (2295), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 477/489 (98%), Positives = 483/489 (99%), Gaps = 3/489 (0%)
Query 1 VACGVGISGCAIGSAIVLASIVAGVIDPANPGMAGLRRWLGPLSILLVLWGLRASIQWLQ 60
+ACGVGISGCAIGSAIVLASIVAGVIDPANPGMAGLRRWLGPLSILLVLWGLRASIQWLQ
Sbjct 1 MACGVGISGCAIGSAIVLASIVAGVIDPANPGMAGLRRWLGPLSILLVLWGLRASIQWLQ 60
Query 61 ARLAQRGASAVIADLSGQVLTAVTARRPSQLAAQRDAAAVLITRGLDGLRPYFTGYLPTL 120
ARLAQRGASAVIADLSGQVLTAVTARRPSQLAAQRDAAAVLITRGLDGLRPYFTGYLPTL
Sbjct 61 ARLAQRGASAVIADLSGQVLTAVTARRPSQLAAQRDAAAVLITRGLDGLRPYFTGYLPTL 120
Query 121 LLAAILTPATVAVIGLYDLKSMAIVVITLPLIPIFMVLIGLATTNPSAAALAAMTAVQAR 180
LLAAILTPATVAVIGLYDLKSMAIVVITLPLIPIFMVLIGLATTNPSAAALAAMTAVQAR
Sbjct 121 LLAAILTPATVAVIGLYDLKSMAIVVITLPLIPIFMVLIGLATTNPSAAALAAMTAVQAR 180
Query 181 LLDLIAGIPTLRALGRASGPEQRIAELSADHRRSAMATLRIAFLSALVLELLATLGVALV 240
LLDLIAGIPTLRALGRASGPEQRIAELSADHRRSAMATLRIAFLSALVLELLATLGVALV
Sbjct 181 LLDLIAGIPTLRALGRASGPEQRIAELSADHRRSAMATLRIAFLSALVLELLATLGVALV 240
Query 241 AVGIGLRLVFGEMSLTAGLTVLLLAPEVYWPLRRVGVQFHAAADGRTAADKAFALLGESP 300
AVGIGLRLVFGEMSLTAGLTVLLLAPEVYWPLRRVGVQFHAAADGRTAADKAFALLGESP
Sbjct 241 AVGIGLRLVFGEMSLTAGLTVLLLAPEVYWPLRRVGVQFHAAADGRTAADKAFALLGESP 300
Query 301 SPTPGRRTVTARGGVIRLERLSVRGRDGRAPYDLTADIEPGRVTVLTGRNGAGKSTTLQA 360
SPTPGRRTVTARGGVIRLERLSVRGRDGRAPYDLTADIEPGRVTVLTGRNGAGKSTTLQA
Sbjct 301 SPTPGRRTVTARGGVIRLERLSVRGRDGRAPYDLTADIEPGRVTVLTGRNGAGKSTTLQA 360
Query 361 IAGLTAPSSGRITVAGVDVTNLAPAAWWRQLSWLPQRPVLVPGTVRHNLVLLGPVDDLER 420
IAGLTAPSSGRITVAGVDVTNLAPAAWWRQLSWLPQRPVLVPGTVRHNLVLLGPVDDLER
Sbjct 361 IAGLTAPSSGRITVAGVDVTNLAPAAWWRQLSWLPQRPVLVPGTVRHNLVLLGPVDDLER 420
Query 421 ACAAAGFDAVLDELPRGLDTVLGRGGVGLSLGQRQRLGLARALGSPAAVLLLDEPTAHLD 480
ACAAAGFDAVLDELPRGLDTVLGRGGVGLSLGQRQRLGLARALGSPAAVLLLDEP++
Sbjct 421 ACAAAGFDAVLDELPRGLDTVLGRGGVGLSLGQRQRLGLARALGSPAAVLLLDEPSS--- 477
Query 481 ARTEQHVLG 489
+ T +H +G
Sbjct 478 SSTTRHPIG 486
>gi|289554605|ref|ZP_06443815.1| transmembrane ATP-binding protein ABC transporter cydD [Mycobacterium
tuberculosis KZN 605]
gi|289439237|gb|EFD21730.1| transmembrane ATP-binding protein ABC transporter cydD [Mycobacterium
tuberculosis KZN 605]
Length=437
Score = 834 bits (2154), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/437 (99%), Positives = 437/437 (100%), Gaps = 0/437 (0%)
Query 91 LAAQRDAAAVLITRGLDGLRPYFTGYLPTLLLAAILTPATVAVIGLYDLKSMAIVVITLP 150
+AAQRDAAAVLITRGLDGLRPYFTGYLPTLLLAAILTPATVAVIGLYDLKSMAIVVITLP
Sbjct 1 MAAQRDAAAVLITRGLDGLRPYFTGYLPTLLLAAILTPATVAVIGLYDLKSMAIVVITLP 60
Query 151 LIPIFMVLIGLATTNPSAAALAAMTAVQARLLDLIAGIPTLRALGRASGPEQRIAELSAD 210
LIPIFMVLIGLATTNPSAAALAAMTAVQARLLDLIAGIPTLRALGRASGPEQRIAELSAD
Sbjct 61 LIPIFMVLIGLATTNPSAAALAAMTAVQARLLDLIAGIPTLRALGRASGPEQRIAELSAD 120
Query 211 HRRSAMATLRIAFLSALVLELLATLGVALVAVGIGLRLVFGEMSLTAGLTVLLLAPEVYW 270
HRRSAMATLRIAFLSALVLELLATLGVALVAVGIGLRLVFGEMSLTAGLTVLLLAPEVYW
Sbjct 121 HRRSAMATLRIAFLSALVLELLATLGVALVAVGIGLRLVFGEMSLTAGLTVLLLAPEVYW 180
Query 271 PLRRVGVQFHAAADGRTAADKAFALLGESPSPTPGRRTVTARGGVIRLERLSVRGRDGRA 330
PLRRVGVQFHAAADGRTAADKAFALLGESPSPTPGRRTVTARGGVIRLERLSVRGRDGRA
Sbjct 181 PLRRVGVQFHAAADGRTAADKAFALLGESPSPTPGRRTVTARGGVIRLERLSVRGRDGRA 240
Query 331 PYDLTADIEPGRVTVLTGRNGAGKSTTLQAIAGLTAPSSGRITVAGVDVTNLAPAAWWRQ 390
PYDLTADIEPGRVTVLTGRNGAGKSTTLQAIAGLTAPSSGRITVAGVDVTNLAPAAWWRQ
Sbjct 241 PYDLTADIEPGRVTVLTGRNGAGKSTTLQAIAGLTAPSSGRITVAGVDVTNLAPAAWWRQ 300
Query 391 LSWLPQRPVLVPGTVRHNLVLLGPVDDLERACAAAGFDAVLDELPRGLDTVLGRGGVGLS 450
LSWLPQRPVLVPGTVRHNLVLLGPVDDLERACAAAGFDAVLDELPRGLDTVLGRGGVGLS
Sbjct 301 LSWLPQRPVLVPGTVRHNLVLLGPVDDLERACAAAGFDAVLDELPRGLDTVLGRGGVGLS 360
Query 451 LGQRQRLGLARALGSPAAVLLLDEPTAHLDARTEQHVLGAIVERARAGATVLVVAHRQQV 510
LGQRQRLGLARALGSPAAVLLLDEPTAHLDARTEQHVLGAIVERARAGATVLVVAHRQQV
Sbjct 361 LGQRQRLGLARALGSPAAVLLLDEPTAHLDARTEQHVLGAIVERARAGATVLVVAHRQQV 420
Query 511 AAAGDRVVEVNSDGFRR 527
AAAGDRVVEVNSDGFRR
Sbjct 421 AAAGDRVVEVNSDGFRR 437
>gi|118464329|ref|YP_882349.1| cysteine ABC transporter ATP-binding protein/permease [Mycobacterium
avium 104]
gi|118165616|gb|ABK66513.1| ABC transporter, CydDC cysteine exporter (CydDC-E) family protein,
permease/ATP-binding protein CydD [Mycobacterium avium
104]
Length=540
Score = 744 bits (1920), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/526 (78%), Positives = 448/526 (86%), Gaps = 5/526 (0%)
Query 1 VACGVGISGCAIGSAIVLASIVAGVIDPANPGMAGLRRWLGPLSILLVLWGLRASIQWLQ 60
V CGV ISGCAIGSA+VLA IVA V+ + G +R W PLSILL LW +RA WLQ
Sbjct 9 VGCGVLISGCAIGSAVVLAGIVARVVGDTSAGE--MRSWPAPLSILLALWAVRAVAHWLQ 66
Query 61 ARLAQRGASAVIADLSGQVLTAVTARRPSQLAAQRDAAAVLITRGLDGLRPYFTGYLPTL 120
ARL QRGASAVIADLSGQVL AVTAR P++LAAQRD AAV++TRGLDGLRPYFTGYLPTL
Sbjct 67 ARLGQRGASAVIADLSGQVLAAVTARPPAELAAQRDEAAVVVTRGLDGLRPYFTGYLPTL 126
Query 121 LLAAILTPATVAVIGLYDLKSMAIVVITLPLIPIFMVLIGLATTNPSAAALAAMTAVQAR 180
+LAAILTPATVAVI YD+KS IV ITLPLIPIFMVLIGLAT + SAAALAAMT +QAR
Sbjct 127 MLAAILTPATVAVIAAYDVKSTVIVAITLPLIPIFMVLIGLATRDRSAAALAAMTTLQAR 186
Query 181 LLDLIAGIPTLRALGRASGPEQRIAELSADHRRSAMATLRIAFLSALVLELLATLGVALV 240
LLDLIAGIPTLRALGR+SGP++ IAEL+A HRRSAMATLRIAFLSALVLELLATLGVAL+
Sbjct 187 LLDLIAGIPTLRALGRSSGPDRSIAELAAAHRRSAMATLRIAFLSALVLELLATLGVALI 246
Query 241 AVGIGLRLVFGEMSLTAGLTVLLLAPEVYWPLRRVGVQFHAAADGRTAADKAFALLGESP 300
AVGIGLRLVFGEM+LTAGLTVLLLAP+VYWPLRR+GV+FHAA DGRTAA AFAL+GE
Sbjct 247 AVGIGLRLVFGEMTLTAGLTVLLLAPDVYWPLRRIGVEFHAAQDGRTAAGAAFALIGEPG 306
Query 301 SPTPGR---RTVTARGGVIRLERLSVRGRDGRAPYDLTADIEPGRVTVLTGRNGAGKSTT 357
P+ + RTVTARG IRLE LSV GRDG+AP DL+A IEPG VTVLTGRNGAGKSTT
Sbjct 307 GPSAAKVRTRTVTARGAPIRLEHLSVAGRDGQAPCDLSAVIEPGAVTVLTGRNGAGKSTT 366
Query 358 LQAIAGLTAPSSGRITVAGVDVTNLAPAAWWRQLSWLPQRPVLVPGTVRHNLVLLGPVDD 417
LQAIAG+TAPSSGR+TV GVDV +LAP WW QLSWLPQRPVLVPGTV NL L G +DD
Sbjct 367 LQAIAGITAPSSGRVTVGGVDVADLAPRGWWAQLSWLPQRPVLVPGTVDENLRLFGELDD 426
Query 418 LERACAAAGFDAVLDELPRGLDTVLGRGGVGLSLGQRQRLGLARALGSPAAVLLLDEPTA 477
+E ACA AGFD VL ELP T+LGRGGVGLSLGQRQRLGLARALGS AAVLLLDEPTA
Sbjct 427 IETACAIAGFDTVLAELPDAGATLLGRGGVGLSLGQRQRLGLARALGSRAAVLLLDEPTA 486
Query 478 HLDARTEQHVLGAIVERARAGATVLVVAHRQQVAAAGDRVVEVNSD 523
HLDA TE+ VL A+VERARAGATV+VV HR+ V A GDRVV V++D
Sbjct 487 HLDAGTEERVLRAVVERARAGATVVVVGHREPVLAIGDRVVAVSAD 532
>gi|183982438|ref|YP_001850729.1| cytochrome transmembrane ATP-binding protein ABC transporter
CydD [Mycobacterium marinum M]
gi|183175764|gb|ACC40874.1| Cytochrome transmembrane ATP-binding protein ABC transporter
CydD [Mycobacterium marinum M]
Length=532
Score = 743 bits (1919), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/525 (76%), Positives = 446/525 (85%), Gaps = 2/525 (0%)
Query 1 VACGVGISGCAIGSAIVLASIVAGVIDPANPGMAGLRRWLGPLSILLVLWGLRASIQWLQ 60
+ CGV ISGCAI SAIVLAS+VA V ++P LR WLG L IL LW LRA WLQ
Sbjct 1 MTCGVVISGCAIASAIVLASMVARV--ASDPSARCLRCWLGSLLILSALWALRAVTHWLQ 58
Query 61 ARLAQRGASAVIADLSGQVLTAVTARRPSQLAAQRDAAAVLITRGLDGLRPYFTGYLPTL 120
ARL QRGASAVIA+LSGQVL +VTAR+P++LAAQRDAAAV++TRGLDGLRPYFTGYLPTL
Sbjct 59 ARLGQRGASAVIAELSGQVLESVTARQPNELAAQRDAAAVVVTRGLDGLRPYFTGYLPTL 118
Query 121 LLAAILTPATVAVIGLYDLKSMAIVVITLPLIPIFMVLIGLATTNPSAAALAAMTAVQAR 180
LAAILTPATV +I +YD+KS I VITLPLIP+FMVLIGLAT SAAALAAM +QAR
Sbjct 119 FLAAILTPATVVMIAVYDVKSALIAVITLPLIPVFMVLIGLATAERSAAALAAMATLQAR 178
Query 181 LLDLIAGIPTLRALGRASGPEQRIAELSADHRRSAMATLRIAFLSALVLELLATLGVALV 240
LLDLIAGIPTLRALGRASGPEQRIAELSA HRRSA+ATLRIAFLSALVLELLATLGVA++
Sbjct 179 LLDLIAGIPTLRALGRASGPEQRIAELSAAHRRSALATLRIAFLSALVLELLATLGVAVI 238
Query 241 AVGIGLRLVFGEMSLTAGLTVLLLAPEVYWPLRRVGVQFHAAADGRTAADKAFALLGESP 300
AV IGLRLVFGEM+LTAGLTVLLLAP+VYWPLRR+GV+FHAA DG++AAD+AF L+GE+
Sbjct 239 AVSIGLRLVFGEMTLTAGLTVLLLAPDVYWPLRRIGVEFHAAQDGKSAADQAFTLIGETA 298
Query 301 SPTPGRRTVTARGGVIRLERLSVRGRDGRAPYDLTADIEPGRVTVLTGRNGAGKSTTLQA 360
P RR VTARG I L+ LSV GRDGR+P++LTA IEPG+VTVLTG+NGAGKSTTLQ
Sbjct 299 CTPPARRAVTARGATIHLQNLSVTGRDGRSPHNLTATIEPGQVTVLTGQNGAGKSTTLQL 358
Query 361 IAGLTAPSSGRITVAGVDVTNLAPAAWWRQLSWLPQRPVLVPGTVRHNLVLLGPVDDLER 420
IAGLT PS+GR+T+AG+D++ L P WWRQLSWLPQR VL+PGTVR NLVLLG DL+
Sbjct 359 IAGLTTPSNGRLTIAGIDISELDPVDWWRQLSWLPQRSVLIPGTVRDNLVLLGEPADLDS 418
Query 421 ACAAAGFDAVLDELPRGLDTVLGRGGVGLSLGQRQRLGLARALGSPAAVLLLDEPTAHLD 480
AC A+GFDAVL ELP GLDTVLGR GVGLSLGQRQRL LAR LGSP+ VLLLDEPTAHLD
Sbjct 419 ACTASGFDAVLAELPDGLDTVLGRDGVGLSLGQRQRLALARVLGSPSPVLLLDEPTAHLD 478
Query 481 ARTEQHVLGAIVERARAGATVLVVAHRQQVAAAGDRVVEVNSDGF 525
+RTE+ VL AI ERAR GATV+VV HR+ V A GD+VVEV DG
Sbjct 479 SRTEEQVLQAIAERARTGATVVVVGHREPVVAIGDQVVEVTRDGL 523
>gi|254775613|ref|ZP_05217129.1| ABC transporter, CydDC cysteine exporter (CydDC-E) family protein,
permease/ATP-binding protein CydD [Mycobacterium avium
subsp. avium ATCC 25291]
Length=540
Score = 742 bits (1916), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/526 (78%), Positives = 447/526 (85%), Gaps = 5/526 (0%)
Query 1 VACGVGISGCAIGSAIVLASIVAGVIDPANPGMAGLRRWLGPLSILLVLWGLRASIQWLQ 60
V CGV ISGCAIGSA+VLA IVA V+ + G +R W PLSILL LW +RA WLQ
Sbjct 9 VGCGVLISGCAIGSAVVLAGIVARVVGDTSAGE--MRSWPAPLSILLALWAVRAVAHWLQ 66
Query 61 ARLAQRGASAVIADLSGQVLTAVTARRPSQLAAQRDAAAVLITRGLDGLRPYFTGYLPTL 120
ARL QRGASAVIADLSGQVL AVTAR P++LAAQRD AAV++TRGLDGLRPYFTGYLPTL
Sbjct 67 ARLGQRGASAVIADLSGQVLAAVTARPPAELAAQRDEAAVVVTRGLDGLRPYFTGYLPTL 126
Query 121 LLAAILTPATVAVIGLYDLKSMAIVVITLPLIPIFMVLIGLATTNPSAAALAAMTAVQAR 180
+LAAILTPATVAVI YD+KS IV ITLPLIPIFMVLIGLAT + SAAALAAMT +QAR
Sbjct 127 MLAAILTPATVAVIAAYDVKSTVIVAITLPLIPIFMVLIGLATRDRSAAALAAMTTLQAR 186
Query 181 LLDLIAGIPTLRALGRASGPEQRIAELSADHRRSAMATLRIAFLSALVLELLATLGVALV 240
LLDLIAGIPTLRALGR+SGP++ IAEL+A HRRSAMATLRIAFLSALVLELLATLGVAL+
Sbjct 187 LLDLIAGIPTLRALGRSSGPDRSIAELAAAHRRSAMATLRIAFLSALVLELLATLGVALI 246
Query 241 AVGIGLRLVFGEMSLTAGLTVLLLAPEVYWPLRRVGVQFHAAADGRTAADKAFALLGESP 300
AVGIGLRLVFGEM+LTAGLTVLLLAP+VYWPLRR+GV+FHAA DGRTAA AFAL+GE
Sbjct 247 AVGIGLRLVFGEMTLTAGLTVLLLAPDVYWPLRRIGVEFHAAQDGRTAAGAAFALIGEPG 306
Query 301 SPTPGR---RTVTARGGVIRLERLSVRGRDGRAPYDLTADIEPGRVTVLTGRNGAGKSTT 357
P+ + RTVTARG IRLE LSV RDG+AP DL+A IEPG VTVLTGRNGAGKSTT
Sbjct 307 GPSAAKVRTRTVTARGAPIRLEHLSVAARDGQAPCDLSAVIEPGAVTVLTGRNGAGKSTT 366
Query 358 LQAIAGLTAPSSGRITVAGVDVTNLAPAAWWRQLSWLPQRPVLVPGTVRHNLVLLGPVDD 417
LQAIAG+TAPSSGR+TV GVDV +L P WW QLSWLPQRPVLVPGTV NL L G +DD
Sbjct 367 LQAIAGITAPSSGRVTVRGVDVADLEPRGWWAQLSWLPQRPVLVPGTVDDNLRLFGELDD 426
Query 418 LERACAAAGFDAVLDELPRGLDTVLGRGGVGLSLGQRQRLGLARALGSPAAVLLLDEPTA 477
+E ACA AGFDAVL ELP T LGRGGVGLSLGQRQRLGLARALGS AAVLLLDEPTA
Sbjct 427 IETACAIAGFDAVLAELPDAGATPLGRGGVGLSLGQRQRLGLARALGSRAAVLLLDEPTA 486
Query 478 HLDARTEQHVLGAIVERARAGATVLVVAHRQQVAAAGDRVVEVNSD 523
HLDARTE+ VL A+VERARAGATV+VV HR+ V A GDRVV V++D
Sbjct 487 HLDARTEERVLRAVVERARAGATVVVVGHREPVLAIGDRVVAVSAD 532
>gi|336457900|gb|EGO36893.1| cysteine export CydDC family ABC transporter permease subunit/ATP-binding
protein CydD [Mycobacterium avium subsp. paratuberculosis
S397]
Length=540
Score = 739 bits (1909), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/526 (78%), Positives = 446/526 (85%), Gaps = 5/526 (0%)
Query 1 VACGVGISGCAIGSAIVLASIVAGVIDPANPGMAGLRRWLGPLSILLVLWGLRASIQWLQ 60
V CGV ISGCAIGSA+VLA IVA V+ + G +R W PLSILL LW +RA WLQ
Sbjct 9 VGCGVLISGCAIGSAVVLAGIVARVVGDTSAGE--MRSWPAPLSILLALWAIRAVAHWLQ 66
Query 61 ARLAQRGASAVIADLSGQVLTAVTARRPSQLAAQRDAAAVLITRGLDGLRPYFTGYLPTL 120
ARL QRGASAVIADLSGQVL AV AR P++LAAQRD AAV++TRGLDGLRPYFTGYLPTL
Sbjct 67 ARLGQRGASAVIADLSGQVLAAVIARPPAELAAQRDEAAVVVTRGLDGLRPYFTGYLPTL 126
Query 121 LLAAILTPATVAVIGLYDLKSMAIVVITLPLIPIFMVLIGLATTNPSAAALAAMTAVQAR 180
+LAAILTPATVAVI YD+KS IV ITLPLIPIFMVLIGLAT + SAAALAAMT +QAR
Sbjct 127 MLAAILTPATVAVIAAYDVKSTVIVAITLPLIPIFMVLIGLATRDRSAAALAAMTTLQAR 186
Query 181 LLDLIAGIPTLRALGRASGPEQRIAELSADHRRSAMATLRIAFLSALVLELLATLGVALV 240
LLDLIAGIPTLRALGR+SGP++RIAEL+A HRRSAMATLRIAFLSALVLELLATLGVAL+
Sbjct 187 LLDLIAGIPTLRALGRSSGPDRRIAELAAAHRRSAMATLRIAFLSALVLELLATLGVALI 246
Query 241 AVGIGLRLVFGEMSLTAGLTVLLLAPEVYWPLRRVGVQFHAAADGRTAADKAFALLGESP 300
AVGIGLRLVFGEM+LTAGLTVLLLAP+VYWPLRR+GV+FHAA DGRTAA AFAL+GE
Sbjct 247 AVGIGLRLVFGEMTLTAGLTVLLLAPDVYWPLRRIGVEFHAAQDGRTAAGAAFALIGEPS 306
Query 301 SPTPGR---RTVTARGGVIRLERLSVRGRDGRAPYDLTADIEPGRVTVLTGRNGAGKSTT 357
P+ + RTVTARG IRLE LSV GRDG+AP DL+A +EPG VTVLTGRNGAGKSTT
Sbjct 307 GPSAAKVRTRTVTARGAPIRLEHLSVAGRDGQAPCDLSAVMEPGAVTVLTGRNGAGKSTT 366
Query 358 LQAIAGLTAPSSGRITVAGVDVTNLAPAAWWRQLSWLPQRPVLVPGTVRHNLVLLGPVDD 417
LQAIAG+TAPSSGR+TV GVDV +L P WW QLSWLPQRPVLVPGTV NL L G +DD
Sbjct 367 LQAIAGITAPSSGRVTVRGVDVADLEPRGWWAQLSWLPQRPVLVPGTVDDNLRLFGELDD 426
Query 418 LERACAAAGFDAVLDELPRGLDTVLGRGGVGLSLGQRQRLGLARALGSPAAVLLLDEPTA 477
+E ACA AGFD VL ELP T LGRGGVGLSLGQRQRLGLARALGS AAVLLLDEPTA
Sbjct 427 IETACAIAGFDTVLAELPDAGATPLGRGGVGLSLGQRQRLGLARALGSRAAVLLLDEPTA 486
Query 478 HLDARTEQHVLGAIVERARAGATVLVVAHRQQVAAAGDRVVEVNSD 523
HLDA TE+ VL A+VERARAGATV+VV HR+ V A GDRVV V++D
Sbjct 487 HLDAGTEERVLRAVVERARAGATVVVVGHREPVLAIGDRVVAVSAD 532
>gi|289757723|ref|ZP_06517101.1| ABC transporter [Mycobacterium tuberculosis T85]
gi|289713287|gb|EFD77299.1| ABC transporter [Mycobacterium tuberculosis T85]
Length=416
Score = 739 bits (1907), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/391 (99%), Positives = 391/391 (100%), Gaps = 0/391 (0%)
Query 1 VACGVGISGCAIGSAIVLASIVAGVIDPANPGMAGLRRWLGPLSILLVLWGLRASIQWLQ 60
+ACGVGISGCAIGSAIVLASIVAGVIDPANPGMAGLRRWLGPLSILLVLWGLRASIQWLQ
Sbjct 1 MACGVGISGCAIGSAIVLASIVAGVIDPANPGMAGLRRWLGPLSILLVLWGLRASIQWLQ 60
Query 61 ARLAQRGASAVIADLSGQVLTAVTARRPSQLAAQRDAAAVLITRGLDGLRPYFTGYLPTL 120
ARLAQRGASAVIADLSGQVLTAVTARRPSQLAAQRDAAAVLITRGLDGLRPYFTGYLPTL
Sbjct 61 ARLAQRGASAVIADLSGQVLTAVTARRPSQLAAQRDAAAVLITRGLDGLRPYFTGYLPTL 120
Query 121 LLAAILTPATVAVIGLYDLKSMAIVVITLPLIPIFMVLIGLATTNPSAAALAAMTAVQAR 180
LLAAILTPATVAVIGLYDLKSMAIVVITLPLIPIFMVLIGLATTNPSAAALAAMTAVQAR
Sbjct 121 LLAAILTPATVAVIGLYDLKSMAIVVITLPLIPIFMVLIGLATTNPSAAALAAMTAVQAR 180
Query 181 LLDLIAGIPTLRALGRASGPEQRIAELSADHRRSAMATLRIAFLSALVLELLATLGVALV 240
LLDLIAGIPTLRALGRASGPEQRIAELSADHRRSAMATLRIAFLSALVLELLATLGVALV
Sbjct 181 LLDLIAGIPTLRALGRASGPEQRIAELSADHRRSAMATLRIAFLSALVLELLATLGVALV 240
Query 241 AVGIGLRLVFGEMSLTAGLTVLLLAPEVYWPLRRVGVQFHAAADGRTAADKAFALLGESP 300
AVGIGLRLVFGEMSLTAGLTVLLLAPEVYWPLRRVGVQFHAAADGRTAADKAFALLGESP
Sbjct 241 AVGIGLRLVFGEMSLTAGLTVLLLAPEVYWPLRRVGVQFHAAADGRTAADKAFALLGESP 300
Query 301 SPTPGRRTVTARGGVIRLERLSVRGRDGRAPYDLTADIEPGRVTVLTGRNGAGKSTTLQA 360
SPTPGRRTVTARGGVIRLERLSVRGRDGRAPYDLTADIEPGRVTVLTGRNGAGKSTTLQA
Sbjct 301 SPTPGRRTVTARGGVIRLERLSVRGRDGRAPYDLTADIEPGRVTVLTGRNGAGKSTTLQA 360
Query 361 IAGLTAPSSGRITVAGVDVTNLAPAAWWRQL 391
IAGLTAPSSGRITVAGVDVTNLAPAAWWRQL
Sbjct 361 IAGLTAPSSGRITVAGVDVTNLAPAAWWRQL 391
>gi|41407412|ref|NP_960248.1| CydD [Mycobacterium avium subsp. paratuberculosis K-10]
gi|41395764|gb|AAS03631.1| CydD [Mycobacterium avium subsp. paratuberculosis K-10]
Length=532
Score = 738 bits (1905), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/524 (78%), Positives = 445/524 (85%), Gaps = 5/524 (0%)
Query 3 CGVGISGCAIGSAIVLASIVAGVIDPANPGMAGLRRWLGPLSILLVLWGLRASIQWLQAR 62
CGV ISGCAIGSA+VLA IVA V+ + G +R W PLSILL LW +RA WLQAR
Sbjct 3 CGVLISGCAIGSAVVLAGIVARVVGDTSAGE--MRSWPAPLSILLALWAIRAVAHWLQAR 60
Query 63 LAQRGASAVIADLSGQVLTAVTARRPSQLAAQRDAAAVLITRGLDGLRPYFTGYLPTLLL 122
L QRGASAVIADLSGQVL AV AR P++LAAQRD AAV++TRGLDGLRPYFTGYLPTL+L
Sbjct 61 LGQRGASAVIADLSGQVLAAVIARPPAELAAQRDEAAVVVTRGLDGLRPYFTGYLPTLML 120
Query 123 AAILTPATVAVIGLYDLKSMAIVVITLPLIPIFMVLIGLATTNPSAAALAAMTAVQARLL 182
AAILTPATVAVI YD+KS IV ITLPLIPIFMVLIGLAT + SAAALAAMT +QARLL
Sbjct 121 AAILTPATVAVIAAYDVKSTVIVAITLPLIPIFMVLIGLATRDRSAAALAAMTTLQARLL 180
Query 183 DLIAGIPTLRALGRASGPEQRIAELSADHRRSAMATLRIAFLSALVLELLATLGVALVAV 242
DLIAGIPTLRALGR+SGP++RIAEL+A HRRSAMATLRIAFLSALVLELLATLGVAL+AV
Sbjct 181 DLIAGIPTLRALGRSSGPDRRIAELAAAHRRSAMATLRIAFLSALVLELLATLGVALIAV 240
Query 243 GIGLRLVFGEMSLTAGLTVLLLAPEVYWPLRRVGVQFHAAADGRTAADKAFALLGESPSP 302
GIGLRLVFGEM+LTAGLTVLLLAP+VYWPLRR+GV+FHAA DGRTAA AFAL+GE P
Sbjct 241 GIGLRLVFGEMTLTAGLTVLLLAPDVYWPLRRIGVEFHAAQDGRTAAGAAFALIGEPSGP 300
Query 303 TPGR---RTVTARGGVIRLERLSVRGRDGRAPYDLTADIEPGRVTVLTGRNGAGKSTTLQ 359
+ + RTVTARG IRLE LSV GRDG+AP DL+A +EPG VTVLTGRNGAGKSTTLQ
Sbjct 301 SAAKVRTRTVTARGAPIRLEHLSVAGRDGQAPCDLSAVMEPGAVTVLTGRNGAGKSTTLQ 360
Query 360 AIAGLTAPSSGRITVAGVDVTNLAPAAWWRQLSWLPQRPVLVPGTVRHNLVLLGPVDDLE 419
AIAG+TAPSSGR+TV GVDV +L P WW QLSWLPQRPVLVPGTV NL L G +DD+E
Sbjct 361 AIAGITAPSSGRVTVRGVDVADLEPRGWWAQLSWLPQRPVLVPGTVDDNLRLFGELDDIE 420
Query 420 RACAAAGFDAVLDELPRGLDTVLGRGGVGLSLGQRQRLGLARALGSPAAVLLLDEPTAHL 479
ACA AGFD VL ELP T LGRGGVGLSLGQRQRLGLARALGS AAVLLLDEPTAHL
Sbjct 421 TACAIAGFDTVLAELPDAGATPLGRGGVGLSLGQRQRLGLARALGSRAAVLLLDEPTAHL 480
Query 480 DARTEQHVLGAIVERARAGATVLVVAHRQQVAAAGDRVVEVNSD 523
DA TE+ VL A+VERARAGATV+VV HR+ V A GDRVV V++D
Sbjct 481 DAGTEERVLRAVVERARAGATVVVVGHREPVLAIGDRVVAVSAD 524
>gi|240167998|ref|ZP_04746657.1| cytochrome transmembrane ATP-binding protein ABC transporter
CydD [Mycobacterium kansasii ATCC 12478]
Length=525
Score = 731 bits (1886), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/518 (79%), Positives = 440/518 (85%), Gaps = 2/518 (0%)
Query 5 VGISGCAIGSAIVLASIVAGVIDPANPGMAGLRRWLGPLSILLVLWGLRASIQWLQARLA 64
+ ISGCAIGSA+VLA IVA V+ A+P L RWLGPL+ILL LW +RA WLQARL
Sbjct 1 MAISGCAIGSAVVLAGIVARVV--ADPSTRHLGRWLGPLAILLALWAIRALTHWLQARLG 58
Query 65 QRGASAVIADLSGQVLTAVTARRPSQLAAQRDAAAVLITRGLDGLRPYFTGYLPTLLLAA 124
QRGASAVIADLSGQVLTAVT R+P Q+AAQRDAAAVL+TRGLDGLRPYFTGYLP LLLA
Sbjct 59 QRGASAVIADLSGQVLTAVTGRQPRQVAAQRDAAAVLVTRGLDGLRPYFTGYLPALLLAV 118
Query 125 ILTPATVAVIGLYDLKSMAIVVITLPLIPIFMVLIGLATTNPSAAALAAMTAVQARLLDL 184
ILTPATVAVI YD+KS AIVVITLPLIPIFMVLIGLAT + S AALAAM +QARLLDL
Sbjct 119 ILTPATVAVIAAYDMKSTAIVVITLPLIPIFMVLIGLATADRSTAALAAMGTLQARLLDL 178
Query 185 IAGIPTLRALGRASGPEQRIAELSADHRRSAMATLRIAFLSALVLELLATLGVALVAVGI 244
IAGIPTLRALGRA GPEQRIAEL+A HRRSAMATLR+AFLSALVLELLATLGVALVAV I
Sbjct 179 IAGIPTLRALGRAVGPEQRIAELAAAHRRSAMATLRVAFLSALVLELLATLGVALVAVSI 238
Query 245 GLRLVFGEMSLTAGLTVLLLAPEVYWPLRRVGVQFHAAADGRTAADKAFALLGESPSPTP 304
GLRLVFG+MSL GLTVLLLAP+VYWPLRR+GV+FHAA DGR AA +AFAL+GE S T
Sbjct 239 GLRLVFGQMSLATGLTVLLLAPDVYWPLRRIGVEFHAAQDGRAAAAQAFALIGEPASTTA 298
Query 305 GRRTVTARGGVIRLERLSVRGRDGRAPYDLTADIEPGRVTVLTGRNGAGKSTTLQAIAGL 364
G RTV ARG +IR+E LSV RDGR+P LTA +EPGRVTVLTGRNGAGKST LQ IAGL
Sbjct 299 GIRTVAARGALIRIETLSVASRDGRSPDALTAVLEPGRVTVLTGRNGAGKSTALQVIAGL 358
Query 365 TAPSSGRITVAGVDVTNLAPAAWWRQLSWLPQRPVLVPGTVRHNLVLLGPVDDLERACAA 424
T PSSGR+TVAG+DV +L PA W RQLSWLPQRPVLVPGTVR NLVL G +DDLE AC A
Sbjct 359 TVPSSGRVTVAGIDVGDLDPADWRRQLSWLPQRPVLVPGTVRDNLVLFGDLDDLESACTA 418
Query 425 AGFDAVLDELPRGLDTVLGRGGVGLSLGQRQRLGLARALGSPAAVLLLDEPTAHLDARTE 484
AGFD VL ELP GLDTVLGRGGVGLSLGQRQRLGLARALGS A +LLLDEPTAHLDA TE
Sbjct 419 AGFDTVLAELPDGLDTVLGRGGVGLSLGQRQRLGLARALGSNAPLLLLDEPTAHLDAVTE 478
Query 485 QHVLGAIVERARAGATVLVVAHRQQVAAAGDRVVEVNS 522
VL A+V+RAR G TV+VV HR V A GDRVVEV +
Sbjct 479 SRVLRAVVDRARQGVTVVVVGHRAPVVAIGDRVVEVTA 516
>gi|118617246|ref|YP_905578.1| component linked with the assembly of cytochrome transport transmembrane
ATP-binding protein ABC transporter CydD [Mycobacterium
ulcerans Agy99]
gi|118569356|gb|ABL04107.1| component linked with the assembly of cytochrome transport transmembrane
ATP-binding protein ABC transporter CydD [Mycobacterium
ulcerans Agy99]
Length=532
Score = 726 bits (1874), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/525 (75%), Positives = 440/525 (84%), Gaps = 2/525 (0%)
Query 1 VACGVGISGCAIGSAIVLASIVAGVIDPANPGMAGLRRWLGPLSILLVLWGLRASIQWLQ 60
+ CGV ISGCAI SAIVLAS+VA V ++P LR WLG L +L LW LRA WLQ
Sbjct 1 MTCGVVISGCAIASAIVLASMVARV--ASDPSARCLRCWLGSLLMLSALWALRAVTHWLQ 58
Query 61 ARLAQRGASAVIADLSGQVLTAVTARRPSQLAAQRDAAAVLITRGLDGLRPYFTGYLPTL 120
ARL Q GASAVIA+LSGQVL +VTAR+P++LAAQRDAAAV++TRGLDGLRPYFTGYLPTL
Sbjct 59 ARLGQPGASAVIAELSGQVLESVTARQPNELAAQRDAAAVVVTRGLDGLRPYFTGYLPTL 118
Query 121 LLAAILTPATVAVIGLYDLKSMAIVVITLPLIPIFMVLIGLATTNPSAAALAAMTAVQAR 180
LAAILTPATV +I +YD+KS I VITLP IP+FMVLIGLAT SAAALAAM +QAR
Sbjct 119 FLAAILTPATVVMIAVYDVKSALIAVITLPPIPVFMVLIGLATAERSAAALAAMATLQAR 178
Query 181 LLDLIAGIPTLRALGRASGPEQRIAELSADHRRSAMATLRIAFLSALVLELLATLGVALV 240
LLDLIAGIPTLRAL RASGPEQRIAELSA HRRSA+ATLRIAFLSA VLELLATLGVA++
Sbjct 179 LLDLIAGIPTLRALDRASGPEQRIAELSAAHRRSALATLRIAFLSAPVLELLATLGVAVI 238
Query 241 AVGIGLRLVFGEMSLTAGLTVLLLAPEVYWPLRRVGVQFHAAADGRTAADKAFALLGESP 300
AV IGLRLVFGEM+LTAGLTVLLL P+VYWPLRR+GV+FHAA DG++AAD+AF L+GE+
Sbjct 239 AVSIGLRLVFGEMTLTAGLTVLLLTPDVYWPLRRIGVEFHAAQDGKSAADQAFTLIGETA 298
Query 301 SPTPGRRTVTARGGVIRLERLSVRGRDGRAPYDLTADIEPGRVTVLTGRNGAGKSTTLQA 360
P RR VTARG I L+ LSV GRDGR+P++LTA IEPG+VTVLTG+NGAGKSTTLQ
Sbjct 299 CTPPARRAVTARGATIHLQNLSVTGRDGRSPHNLTATIEPGQVTVLTGQNGAGKSTTLQL 358
Query 361 IAGLTAPSSGRITVAGVDVTNLAPAAWWRQLSWLPQRPVLVPGTVRHNLVLLGPVDDLER 420
IAGLT PS+GR+TVAG+D++ L P WWRQLSWLPQR VL+PGTVR NLVLLG DL+
Sbjct 359 IAGLTTPSNGRLTVAGIDISELDPVDWWRQLSWLPQRSVLIPGTVRDNLVLLGEPADLDS 418
Query 421 ACAAAGFDAVLDELPRGLDTVLGRGGVGLSLGQRQRLGLARALGSPAAVLLLDEPTAHLD 480
ACAA+GFDAVL ELP GLDTVLGR GVGLSLGQRQRL LAR LGSP+ VLLLDEPTAHLD
Sbjct 419 ACAASGFDAVLAELPDGLDTVLGRDGVGLSLGQRQRLALARVLGSPSPVLLLDEPTAHLD 478
Query 481 ARTEQHVLGAIVERARAGATVLVVAHRQQVAAAGDRVVEVNSDGF 525
+RT + VL AI ERAR GATV+VV HR+ V A D+VVEV DG
Sbjct 479 SRTGEQVLQAIAERARTGATVVVVGHREPVVAICDQVVEVTRDGL 523
>gi|289569666|ref|ZP_06449893.1| transmembrane ATP-binding protein ABC transporter cydD [Mycobacterium
tuberculosis T17]
gi|289543420|gb|EFD47068.1| transmembrane ATP-binding protein ABC transporter cydD [Mycobacterium
tuberculosis T17]
Length=434
Score = 725 bits (1872), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/435 (92%), Positives = 406/435 (94%), Gaps = 3/435 (0%)
Query 1 VACGVGISGCAIGSAIVLASIVAGVIDPANPGMAGLRRWLGPLSILLVLWGLRASIQWLQ 60
+ACGVGISGCAIGSAIVLASIVAGVIDPANPGMAGLRRWLGPLSILLVLWGLRASIQWLQ
Sbjct 1 MACGVGISGCAIGSAIVLASIVAGVIDPANPGMAGLRRWLGPLSILLVLWGLRASIQWLQ 60
Query 61 ARLAQRGASAVIADLSGQVLTAVTARRPSQLAAQRDAAAVLITRGLDGLRPYFTGYLPTL 120
ARLAQRGASAVIADLSGQVLTAVTARRPSQLAAQRDAAAVLITRGLDGLRPYFTGYLPTL
Sbjct 61 ARLAQRGASAVIADLSGQVLTAVTARRPSQLAAQRDAAAVLITRGLDGLRPYFTGYLPTL 120
Query 121 LLAAILTPATVAVIGLYDLKSMAIVVITLPLIPIFMVLIGLATTNPSAAALAAMTAVQAR 180
LLAAILTPATVAVIGLYDLKSMAIVVITLPLIPIFMVLIGLATTNPSAAALAAMTAVQAR
Sbjct 121 LLAAILTPATVAVIGLYDLKSMAIVVITLPLIPIFMVLIGLATTNPSAAALAAMTAVQAR 180
Query 181 LLDLIAGIPTLRALGRASGPEQRIAELSADHRRSAMATLRIAFLSALVLELLATLGVALV 240
LLDLIAGIPTLRALGRASGPEQRIAELSADHRRSAMATLRIAFLSALVLELLATLGVALV
Sbjct 181 LLDLIAGIPTLRALGRASGPEQRIAELSADHRRSAMATLRIAFLSALVLELLATLGVALV 240
Query 241 AVGIGLRLVFGEMSLTAGLTVLLLAPEVYWPLRRVGVQFHAAADGRTAADKAFALLGESP 300
AVGIGLRLVFGEMSLTAGLTVLLLAPEVYWPLRRVGVQFHAAADGRTAADKAFALLGESP
Sbjct 241 AVGIGLRLVFGEMSLTAGLTVLLLAPEVYWPLRRVGVQFHAAADGRTAADKAFALLGESP 300
Query 301 SPTPGRRTVTARGGVIRLERLSVRGRDGRAPYDLTADIEPGRVTVLTGRNGAGKSTTLQA 360
SPTPGRRTVTARGGVIRLERLSVRGRDGRAPYDLTADIEPGRVTVLTGRNGAGKSTTLQA
Sbjct 301 SPTPGRRTVTARGGVIRLERLSVRGRDGRAPYDLTADIEPGRVTVLTGRNGAGKSTTLQA 360
Query 361 IAGLTAPSSGRITVAGVDVTNLAPAAWWRQLSWLPQRPVLVPGTVRHNLVLLGPVDDLER 420
IAGLTAPSSGRITVAGVDVTNLAPAAWWRQLS G ++ + +
Sbjct 361 IAGLTAPSSGRITVAGVDVTNLAPAAWWRQLSCCAAAGA---GPRNRRTLVCWALWMISS 417
Query 421 ACAAAGFDAVLDELP 435
++ DAVLDE P
Sbjct 418 VLRSSRIDAVLDECP 432
>gi|342860808|ref|ZP_08717458.1| cysteine ABC transporter ATP-binding protein/permease [Mycobacterium
colombiense CECT 3035]
gi|342131832|gb|EGT85089.1| cysteine ABC transporter ATP-binding protein/permease [Mycobacterium
colombiense CECT 3035]
Length=536
Score = 711 bits (1835), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/524 (79%), Positives = 445/524 (85%), Gaps = 5/524 (0%)
Query 1 VACGVGISGCAIGSAIVLASIVAGVI-DPANPGMAGLRRWLGPLSILLVLWGLRASIQWL 59
V CGV ISGCAIGSAI+LA IVAGV+ DPA L WLGPLSILL LW +RA WL
Sbjct 9 VGCGVVISGCAIGSAIILARIVAGVVGDPAP----SLHAWLGPLSILLALWTVRALTHWL 64
Query 60 QARLAQRGASAVIADLSGQVLTAVTARRPSQLAAQRDAAAVLITRGLDGLRPYFTGYLPT 119
QARL QRGASAVIADLSGQVL AVTAR+P +LA QRD AAV++TRGLDGLRPYFTGYLPT
Sbjct 65 QARLGQRGASAVIADLSGQVLAAVTARQPGELATQRDTAAVVVTRGLDGLRPYFTGYLPT 124
Query 120 LLLAAILTPATVAVIGLYDLKSMAIVVITLPLIPIFMVLIGLATTNPSAAALAAMTAVQA 179
L+LAAILTPATVAV+ YDLKS A+V ITLPLIPIFMVLIGLAT + SAAALAAMT +QA
Sbjct 125 LMLAAILTPATVAVVAAYDLKSAAVVAITLPLIPIFMVLIGLATADRSAAALAAMTTLQA 184
Query 180 RLLDLIAGIPTLRALGRASGPEQRIAELSADHRRSAMATLRIAFLSALVLELLATLGVAL 239
RLLDLIAGIPTLRALGR+SGPE RIAEL+A HRRSAMATLRIAFLSALVLELLATLGVAL
Sbjct 185 RLLDLIAGIPTLRALGRSSGPEHRIAELAAAHRRSAMATLRIAFLSALVLELLATLGVAL 244
Query 240 VAVGIGLRLVFGEMSLTAGLTVLLLAPEVYWPLRRVGVQFHAAADGRTAADKAFALLGES 299
+AVGIG RLVFGEM+LT GLTVLLLAP+VYWPLRR+GV+FHAA DGR AA AFAL+GE
Sbjct 245 IAVGIGFRLVFGEMTLTTGLTVLLLAPDVYWPLRRIGVEFHAAQDGRAAAGAAFALIGEP 304
Query 300 PSPTPGRRTVTARGGVIRLERLSVRGRDGRAPYDLTADIEPGRVTVLTGRNGAGKSTTLQ 359
+PT +TVTARG IRL+ L+V GRDG+APYDL+A IEPG VTVLTGRNGAGKST LQ
Sbjct 305 AAPTAKTQTVTARGARIRLDHLTVTGRDGQAPYDLSAVIEPGSVTVLTGRNGAGKSTALQ 364
Query 360 AIAGLTAPSSGRITVAGVDVTNLAPAAWWRQLSWLPQRPVLVPGTVRHNLVLLGPVDDLE 419
A+AG++ PSSGR++V GVDV L PA WW QLSWLPQRPVLVPGTV NL LLG + D E
Sbjct 365 AVAGISVPSSGRVSVDGVDVAGLEPAGWWAQLSWLPQRPVLVPGTVDDNLKLLGELHDAE 424
Query 420 RACAAAGFDAVLDELPRGLDTVLGRGGVGLSLGQRQRLGLARALGSPAAVLLLDEPTAHL 479
+ACA +GFDAVL ELP G TVLGRGG GLSLGQRQRLGLARALGS AAVLLLDEPTAHL
Sbjct 425 KACADSGFDAVLAELPDGGATVLGRGGTGLSLGQRQRLGLARALGSTAAVLLLDEPTAHL 484
Query 480 DARTEQHVLGAIVERARAGATVLVVAHRQQVAAAGDRVVEVNSD 523
DA TE VL AIVERARAGATV+VV HR V A GDRVVEV +D
Sbjct 485 DAATEDRVLRAIVERARAGATVIVVGHRAPVLAIGDRVVEVVAD 528
>gi|296164489|ref|ZP_06847060.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295900089|gb|EFG79524.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium parascrofulaceum ATCC BAA-614]
Length=525
Score = 709 bits (1831), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/517 (78%), Positives = 435/517 (85%), Gaps = 2/517 (0%)
Query 7 ISGCAIGSAIVLASIVAGVIDPANPGMAGLRRWLGPLSILLVLWGLRASIQWLQARLAQR 66
ISGCAIGSAIVLA +VA + P GL W PL+ILL LW +R WLQARL QR
Sbjct 3 ISGCAIGSAIVLAGVVARAVGDHPP--HGLAAWRVPLAILLTLWTIRTLAHWLQARLGQR 60
Query 67 GASAVIADLSGQVLTAVTARRPSQLAAQRDAAAVLITRGLDGLRPYFTGYLPTLLLAAIL 126
GASAVIADLSGQVLT+VTAR+P +LA QRDAAA+++TRGLDGLRPYFTGYLP LLLAAIL
Sbjct 61 GASAVIADLSGQVLTSVTARQPGELATQRDAAALVVTRGLDGLRPYFTGYLPALLLAAIL 120
Query 127 TPATVAVIGLYDLKSMAIVVITLPLIPIFMVLIGLATTNPSAAALAAMTAVQARLLDLIA 186
TPATVAVI +YDLKS AIV ITLPLIP+FMVLIGLAT + SAAALAAMT +Q RLLDLIA
Sbjct 121 TPATVAVIAVYDLKSAAIVAITLPLIPVFMVLIGLATADRSAAALAAMTTLQGRLLDLIA 180
Query 187 GIPTLRALGRASGPEQRIAELSADHRRSAMATLRIAFLSALVLELLATLGVALVAVGIGL 246
GIPTLRALGR GPE+RIAEL+ HRRSAMATLRIAFLSALVLELLATLGVAL+AVGIGL
Sbjct 181 GIPTLRALGRGQGPERRIAELADAHRRSAMATLRIAFLSALVLELLATLGVALIAVGIGL 240
Query 247 RLVFGEMSLTAGLTVLLLAPEVYWPLRRVGVQFHAAADGRTAADKAFALLGESPSPTPGR 306
RLVFGEM+L GLTVLLLAP+VYWPLRR+GV+FHAA DGRTAAD+AFAL+G S P
Sbjct 241 RLVFGEMTLATGLTVLLLAPDVYWPLRRIGVEFHAAQDGRTAADQAFALIGGSGRPKTHG 300
Query 307 RTVTARGGVIRLERLSVRGRDGRAPYDLTADIEPGRVTVLTGRNGAGKSTTLQAIAGLTA 366
RTVTARG IRLE L V GRDG AP DL A +EPG VTVLTGRNGAGKST LQAI GLT
Sbjct 301 RTVTARGARIRLEGLGVAGRDGHAPCDLNALVEPGSVTVLTGRNGAGKSTALQAITGLTV 360
Query 367 PSSGRITVAGVDVTNLAPAAWWRQLSWLPQRPVLVPGTVRHNLVLLGPVDDLERACAAAG 426
PSSGR+TVAGVDV +L PAAWWRQLSWLPQRPVLVPGTVR NL L G DDL+ ACAA+
Sbjct 361 PSSGRVTVAGVDVADLEPAAWWRQLSWLPQRPVLVPGTVRDNLALFGAPDDLQTACAASD 420
Query 427 FDAVLDELPRGLDTVLGRGGVGLSLGQRQRLGLARALGSPAAVLLLDEPTAHLDARTEQH 486
FD VL +LP GLDTVLGRGGVGLSLGQRQRLGLARALGS A VLLLDEPTAHLDAR E+
Sbjct 421 FDTVLADLPDGLDTVLGRGGVGLSLGQRQRLGLARALGSSAPVLLLDEPTAHLDARAEER 480
Query 487 VLGAIVERARAGATVLVVAHRQQVAAAGDRVVEVNSD 523
VL AI ERARAGATV+VV HR V A GDRVVEV +D
Sbjct 481 VLRAIAERARAGATVVVVGHRAPVLAIGDRVVEVAAD 517
>gi|254820972|ref|ZP_05225973.1| CydD [Mycobacterium intracellulare ATCC 13950]
Length=524
Score = 687 bits (1773), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/518 (80%), Positives = 446/518 (87%), Gaps = 4/518 (0%)
Query 7 ISGCAIGSAIVLASIVAGVIDPANPGMAGLRRWLGPLSILLVLWGLRASIQWLQARLAQR 66
ISGCAIGSAIVLA IVA V+ A+P GL W GPLS+LL LW +RA W QARL QR
Sbjct 2 ISGCAIGSAIVLARIVARVV--ADPPARGLHAWWGPLSLLLALWVIRAIAHWFQARLGQR 59
Query 67 GASAVIADLSGQVLTAVTARRPSQLAAQRDAAAVLITRGLDGLRPYFTGYLPTLLLAAIL 126
GASAVIADLSG+VL AVTAR+P +LAAQRDAAAV++TRGLDGLRPY TGYLPTLLLAAIL
Sbjct 60 GASAVIADLSGRVLDAVTARQPGELAAQRDAAAVVVTRGLDGLRPYLTGYLPTLLLAAIL 119
Query 127 TPATVAVIGLYDLKSMAIVVITLPLIPIFMVLIGLATTNPSAAALAAMTAVQARLLDLIA 186
TPATVAVI YDLKS AIV ITLPLIP+FMVLIGLAT + SAAALAAMT +QARLLDLIA
Sbjct 120 TPATVAVIAAYDLKSTAIVAITLPLIPVFMVLIGLATRDRSAAALAAMTTLQARLLDLIA 179
Query 187 GIPTLRALGRASGPEQRIAELSADHRRSAMATLRIAFLSALVLELLATLGVALVAVGIGL 246
GIPTLRALGR +GPEQRIAEL+A HRRSAMATLRIAFLSALVLELLATLGVAL+AVGIGL
Sbjct 180 GIPTLRALGRGAGPEQRIAELAAAHRRSAMATLRIAFLSALVLELLATLGVALIAVGIGL 239
Query 247 RLVFGEMSLTAGLTVLLLAPEVYWPLRRVGVQFHAAADGRTAADKAFALLGESPSPTPGR 306
RLVFGEM+LT GLTVLLLAP+VYWPLRR+GV+FHAA DGR AAD AFAL+GE +P GR
Sbjct 240 RLVFGEMTLTTGLTVLLLAPDVYWPLRRIGVEFHAAQDGRAAADAAFALIGEH-APAKGR 298
Query 307 -RTVTARGGVIRLERLSVRGRDGRAPYDLTADIEPGRVTVLTGRNGAGKSTTLQAIAGLT 365
R VTARG IRLERL+V GRDGRAP+DL A IEPG VTVLTGRNGAGKSTTLQAIAG+T
Sbjct 299 TRAVTARGAPIRLERLTVAGRDGRAPWDLDAVIEPGAVTVLTGRNGAGKSTTLQAIAGIT 358
Query 366 APSSGRITVAGVDVTNLAPAAWWRQLSWLPQRPVLVPGTVRHNLVLLGPVDDLERACAAA 425
SSGR+TVAGVDV +L PA WW QLSWLPQRPVLVPGTV NL LLG ++D E ACA +
Sbjct 359 EASSGRVTVAGVDVADLEPARWWAQLSWLPQRPVLVPGTVDDNLALLGELEDRETACAVS 418
Query 426 GFDAVLDELPRGLDTVLGRGGVGLSLGQRQRLGLARALGSPAAVLLLDEPTAHLDARTEQ 485
GFDAVL ELP G DTVLGRGGVGLSLGQRQRLGLARALGS A VLLLDEPTAHLDARTE+
Sbjct 419 GFDAVLAELPEGGDTVLGRGGVGLSLGQRQRLGLARALGSTADVLLLDEPTAHLDARTEE 478
Query 486 HVLGAIVERARAGATVLVVAHRQQVAAAGDRVVEVNSD 523
VL AI RARAGATV+VV HR+ V A GDRVVEV +D
Sbjct 479 RVLRAIAARARAGATVIVVGHREPVLAIGDRVVEVIAD 516
>gi|108800004|ref|YP_640201.1| ABC transporter-like protein [Mycobacterium sp. MCS]
gi|119869129|ref|YP_939081.1| ABC transporter, transmembrane region, type 1 [Mycobacterium
sp. KMS]
gi|108770423|gb|ABG09145.1| ABC transporter related protein [Mycobacterium sp. MCS]
gi|119695218|gb|ABL92291.1| ABC transporter, transmembrane region, type 1 [Mycobacterium
sp. KMS]
Length=530
Score = 589 bits (1518), Expect = 5e-166, Method: Compositional matrix adjust.
Identities = 346/524 (67%), Positives = 397/524 (76%), Gaps = 17/524 (3%)
Query 1 VACGVGISGCAIGSAIVLASIVAGVI-DPANPGMAGLRRWLGPLSILLVLWGLRASIQWL 59
V CGV IS I SA+VLA +V+GVI DPA+ +A W L +L LW +R QWL
Sbjct 18 VICGVVISAATIASAVVLARVVSGVITDPASRTLAA---WAPMLVLLAGLWTVRFLAQWL 74
Query 60 QARLAQRGASAVIADLSGQVLTAVTARRPSQLAAQRDAAAVLITRGLDGLRPYFTGYLPT 119
Q RL+QRGA+AVIADLS QVL VTA P QLAA RD AA +++RGLDGLRP+FTGYLP
Sbjct 75 QGRLSQRGATAVIADLSAQVLRTVTALPPRQLAAVRDDAATVVSRGLDGLRPFFTGYLPA 134
Query 120 LLLAAILTPATVAVIGLYDLKSMAIVVITLPLIPIFMVLIGLATTNPSAAALAAMTAVQA 179
+ LA ILTPA V I + D +S IV+I LPLIPIFM+LIGL T + SAAALAAMT +Q+
Sbjct 135 VFLAGILTPAAVVAIAVVDWRSAVIVLIALPLIPIFMILIGLVTRDRSAAALAAMTTLQS 194
Query 180 RLLDLIAGIPTLRALGRASGPEQRIAELSADHRRSAMATLRIAFLSALVLELLATLGVAL 239
RLLDL+AGIPTL ALGRA+G QRIAELSA HRRSAMATLR+AFLSALVLELLATLGVAL
Sbjct 195 RLLDLVAGIPTLAALGRAAGSAQRIAELSAAHRRSAMATLRVAFLSALVLELLATLGVAL 254
Query 240 VAVGIGLRLVFGEMSLTAGLTVLLLAPEVYWPLRRVGVQFHAAADGRTAADKAFALLGES 299
VAV +GLRLVFG+M+L +GL LLLAPEV+WPLRRVGV+FHAA DG+TAAD+AFAL+
Sbjct 255 VAVSVGLRLVFGDMTLFSGLAALLLAPEVFWPLRRVGVEFHAAQDGKTAADRAFALIETG 314
Query 300 PSPTPGRRTVTARGGVIRLERLSVRGRDGRAPYDLTADIEPGRVTVLTGRNGAGKSTTLQ 359
+ G RTV ARG VI ++ DL +D+ PGRVTVLTG NG GKSTTLQ
Sbjct 315 AATQSGTRTVDARGAVIHVD-------------DLRSDLSPGRVTVLTGPNGCGKSTTLQ 361
Query 360 AIAGLTAPSSGRITVAGVDVTNLAPAAWWRQLSWLPQRPVLVPGTVRHNLVLLGPVDDLE 419
AI GL P SGR+TVAGV+V L AWWRQ++WLP RPVLVPGTVR NL L GP+ D++
Sbjct 362 AILGLGEPLSGRVTVAGVEVAELDLPAWWRQIAWLPHRPVLVPGTVRDNLELFGPLTDID 421
Query 420 RACAAAGFDAVLDELPRGLDTVLGRGGVGLSLGQRQRLGLARALGSPAAVLLLDEPTAHL 479
+C GFD VL LP GLDTVLGR GVGLSLGQRQRLGLAR GS AAVLLLDEPTAHL
Sbjct 422 NSCREGGFDEVLAGLPEGLDTVLGRDGVGLSLGQRQRLGLARVFGSDAAVLLLDEPTAHL 481
Query 480 DARTEQHVLGAIVERARAGATVLVVAHRQQVAAAGDRVVEVNSD 523
DA E VL AI RARAGATVLVV HR V + GD+VV + ++
Sbjct 482 DAPLEARVLRAIAARARAGATVLVVGHRDSVLSVGDQVVRMGAE 525
>gi|126435633|ref|YP_001071324.1| ABC transporter, transmembrane region, type 1 [Mycobacterium
sp. JLS]
gi|126235433|gb|ABN98833.1| ABC transporter, transmembrane region, type 1 [Mycobacterium
sp. JLS]
Length=530
Score = 586 bits (1511), Expect = 3e-165, Method: Compositional matrix adjust.
Identities = 349/525 (67%), Positives = 401/525 (77%), Gaps = 19/525 (3%)
Query 1 VACGVGISGCAIGSAIVLASIVAGVI-DPANPGMAGLRRWLGPLSILLVLWGLRASIQWL 59
V CGV IS I SA+VLA +V+GVI DPA+ +A W L +L LW +R QWL
Sbjct 18 VICGVVISAATIASAVVLARVVSGVITDPASRTLAA---WAPMLVLLAGLWTVRFLAQWL 74
Query 60 QARLAQRGASAVIADLSGQVLTAVTARRPSQLAAQRDAAAVLITRGLDGLRPYFTGYLPT 119
Q RL+QRGA+AVIADLS QVL VTA P QLAA RD AA +++RGLDGLRP+FTGYLP
Sbjct 75 QGRLSQRGATAVIADLSAQVLRTVTALPPRQLAAVRDDAATVVSRGLDGLRPFFTGYLPA 134
Query 120 LLLAAILTPATVAVIGLYDLKSMAIVVITLPLIPIFMVLIGLATTNPSAAALAAMTAVQA 179
+ LA ILTPA V I + D +S IV+I LPLIPIFM+LIGL T + SAAALAAMT +Q+
Sbjct 135 VFLAGILTPAAVVAIAVVDWRSAVIVLIALPLIPIFMILIGLVTRDRSAAALAAMTTLQS 194
Query 180 RLLDLIAGIPTLRALGRASGPEQRIAELSADHRRSAMATLRIAFLSALVLELLATLGVAL 239
RLLDL+AGIPTL ALGRA+G QRIAELSA HRRSAMATLR+AFLSALVLELLATLGVAL
Sbjct 195 RLLDLVAGIPTLAALGRAAGSAQRIAELSAAHRRSAMATLRVAFLSALVLELLATLGVAL 254
Query 240 VAVGIGLRLVFGEMSLTAGLTVLLLAPEVYWPLRRVGVQFHAAADGRTAADKAFALLGES 299
VAV +GLRLVFG+M+L +GL LLLAPEV+WPLRRVGV+FHAA DG+TAA++AFAL+ ES
Sbjct 255 VAVSVGLRLVFGDMTLFSGLAALLLAPEVFWPLRRVGVEFHAAQDGKTAAERAFALI-ES 313
Query 300 PSPTP-GRRTVTARGGVIRLERLSVRGRDGRAPYDLTADIEPGRVTVLTGRNGAGKSTTL 358
+ TP G RTV ARG VI ++ DL +D+ PGR+TVLTG NG GKSTTL
Sbjct 314 GAATPSGTRTVGARGAVIHVD-------------DLRSDLSPGRLTVLTGPNGCGKSTTL 360
Query 359 QAIAGLTAPSSGRITVAGVDVTNLAPAAWWRQLSWLPQRPVLVPGTVRHNLVLLGPVDDL 418
QAI GL P SGR+TVAGV+V L AWWRQ++WLP RPVLVPGTVR NL L GP+ D+
Sbjct 361 QAILGLGEPLSGRVTVAGVEVAELDLPAWWRQIAWLPHRPVLVPGTVRDNLELFGPLTDI 420
Query 419 ERACAAAGFDAVLDELPRGLDTVLGRGGVGLSLGQRQRLGLARALGSPAAVLLLDEPTAH 478
+ AC GFD VL LP GLDTVLGR GVGLSLGQRQRLGLAR GS AAVLLLDEPTAH
Sbjct 421 DNACREGGFDEVLAGLPEGLDTVLGRDGVGLSLGQRQRLGLARVFGSDAAVLLLDEPTAH 480
Query 479 LDARTEQHVLGAIVERARAGATVLVVAHRQQVAAAGDRVVEVNSD 523
LDA E VL AI RARAGATVLVV HR V + GD+VV + ++
Sbjct 481 LDAPLEARVLRAIAARARAGATVLVVGHRDSVLSVGDQVVRMGAE 525
>gi|118471604|ref|YP_887544.1| cysteine ABC transporter permease/ATP-binding protein [Mycobacterium
smegmatis str. MC2 155]
gi|118172891|gb|ABK73787.1| ABC transporter, CydDC cysteine exporter (CydDC-E) family protein,
permease/ATP-binding protein CydD [Mycobacterium smegmatis
str. MC2 155]
Length=509
Score = 573 bits (1478), Expect = 2e-161, Method: Compositional matrix adjust.
Identities = 331/517 (65%), Positives = 376/517 (73%), Gaps = 14/517 (2%)
Query 7 ISGCAIGSAIVLASIVAGVIDPANPGMAGLRRWLGPLSILLVLWGLRASIQWLQARLAQR 66
I+GC I SA+VLA IVAG+I + G W L L VLW +R QW Q RL+QR
Sbjct 3 IAGCTIASAVVLAHIVAGIITNPATALGGETDWAPGLVALAVLWSVRVVAQWFQGRLSQR 62
Query 67 GASAVIADLSGQVLTAVTARRPSQLAAQRDAAAVLITRGLDGLRPYFTGYLPTLLLAAIL 126
GA+AVI +LS QVL++VT P +LAA RD+AA ++TRGLDGLRPYFTGYLP ++LA IL
Sbjct 63 GATAVIGELSRQVLSSVTTSSPRRLAADRDSAAAVVTRGLDGLRPYFTGYLPAVVLAGIL 122
Query 127 TPATVAVIGLYDLKSMAIVVITLPLIPIFMVLIGLATTNPSAAALAAMTAVQARLLDLIA 186
TPA + V+ YD ++ AIVVI LPLIPIFMVLIGL T SAAAL AMT +Q R+LDLIA
Sbjct 123 TPAALVVMAAYDWQAAAIVVIALPLIPIFMVLIGLLTAERSAAALTAMTTLQGRMLDLIA 182
Query 187 GIPTLRALGRASGPEQRIAELSADHRRSAMATLRIAFLSALVLELLATLGVALVAVGIGL 246
GIPTLRA+GRA G QRIAELSA HRRS MATLRI+FLSALVLELLATLGVALVAV +GL
Sbjct 183 GIPTLRAVGRAGGSVQRIAELSASHRRSTMATLRISFLSALVLELLATLGVALVAVSVGL 242
Query 247 RLVFGEMSLTAGLTVLLLAPEVYWPLRRVGVQFHAAADGRTAADKAFALLGESPSPTPGR 306
RLVFG+M+L AGLT LLLAPEV+WPLRRVG FHAA DG+TAA++A L E P P G
Sbjct 243 RLVFGDMTLAAGLTALLLAPEVFWPLRRVGAAFHAAQDGKTAAEQALRLCAE-PHPPTGH 301
Query 307 RTVTARGGVIRLERLSVRGRDGRAPYDLTADIEPGRVTVLTGRNGAGKSTTLQAIAGLTA 366
V A VI + L A +EPGRVTVLTG NG GKST LQAI GL
Sbjct 302 EVVPAGAPVIEVPALK-------------AVMEPGRVTVLTGPNGVGKSTLLQAILGLQE 348
Query 367 PSSGRITVAGVDVTNLAPAAWWRQLSWLPQRPVLVPGTVRHNLVLLGPVDDLERACAAAG 426
G I VAGV+V L +AWW +L+W+P RPVLVPGTVR NL LLGPV L+ C + G
Sbjct 349 SPCGPILVAGVEVGALDRSAWWGRLAWMPHRPVLVPGTVRENLELLGPVPGLDEVCRSVG 408
Query 427 FDAVLDELPRGLDTVLGRGGVGLSLGQRQRLGLARALGSPAAVLLLDEPTAHLDARTEQH 486
FD VL ELP G +T LGRGGVGLSLGQRQRLGL RALG+PA VLLLDEPTAHLD E
Sbjct 409 FDEVLGELPDGSETPLGRGGVGLSLGQRQRLGLVRALGAPADVLLLDEPTAHLDGALEDR 468
Query 487 VLGAIVERARAGATVLVVAHRQQVAAAGDRVVEVNSD 523
VL AIV RARAGATV++V HR V AA D VV + S
Sbjct 469 VLAAIVARARAGATVVMVGHRAPVLAAADHVVTMESS 505
>gi|6289096|gb|AAF06813.1|AF196488_3 CydD [Mycobacterium smegmatis str. MC2 155]
Length=509
Score = 570 bits (1469), Expect = 2e-160, Method: Compositional matrix adjust.
Identities = 334/517 (65%), Positives = 378/517 (74%), Gaps = 14/517 (2%)
Query 7 ISGCAIGSAIVLASIVAGVIDPANPGMAGLRRWLGPLSILLVLWGLRASIQWLQARLAQR 66
I+GC I SA+VLA IVAG+I + G W L L VLW +R QW Q RL+QR
Sbjct 3 IAGCTIASAVVLAHIVAGIITNPATALGGETDWAPGLVALAVLWSVRVVAQWFQGRLSQR 62
Query 67 GASAVIADLSGQVLTAVTARRPSQLAAQRDAAAVLITRGLDGLRPYFTGYLPTLLLAAIL 126
GA+AVI +LS QVL++VT P +LAA RD+AA ++TRGLDGLRPYFTGYLP ++LA IL
Sbjct 63 GATAVIGELSRQVLSSVTTSSPRRLAADRDSAAAVVTRGLDGLRPYFTGYLPAVVLAGIL 122
Query 127 TPATVAVIGLYDLKSMAIVVITLPLIPIFMVLIGLATTNPSAAALAAMTAVQARLLDLIA 186
TPA + V+ YD ++ AIVVI LPLIPIFMVLIGL T SAAAL AMT +Q R+LDLIA
Sbjct 123 TPAALVVMAAYDWQAAAIVVIALPLIPIFMVLIGLLTAERSAAALTAMTTLQGRMLDLIA 182
Query 187 GIPTLRALGRASGPEQRIAELSADHRRSAMATLRIAFLSALVLELLATLGVALVAVGIGL 246
GIPTLRA+GRA G QRIAELSA HRRS MATLRI+FLSALVLELLATLGVALVAV +GL
Sbjct 183 GIPTLRAVGRAGGSVQRIAELSASHRRSTMATLRISFLSALVLELLATLGVALVAVSVGL 242
Query 247 RLVFGEMSLTAGLTVLLLAPEVYWPLRRVGVQFHAAADGRTAADKAFALLGESPSPTPGR 306
RLVFG+M+L AGLT LLLAPEV+WPLRRVG FHAA DG+TAA++A L E P P G
Sbjct 243 RLVFGDMTLAAGLTALLLAPEVFWPLRRVGAAFHAAQDGKTAAEQALRLCAE-PHPPYG- 300
Query 307 RTVTARGGVIRLERLSVRGRDGRAPYDLTADIEPGRVTVLTGRNGAGKSTTLQAIAGLTA 366
RGG R R R RA A +EPGRVTVLTG NG GKST LQAI GL
Sbjct 301 ----PRGG----PRRGARDRGTRA----EAVMEPGRVTVLTGPNGVGKSTLLQAILGLQE 348
Query 367 PSSGRITVAGVDVTNLAPAAWWRQLSWLPQRPVLVPGTVRHNLVLLGPVDDLERACAAAG 426
G I VAGV+V L +AWW +L+W+P RPVLVPGTVR NL LLGPV L+ C + G
Sbjct 349 SPCGPILVAGVEVGALDRSAWWGRLAWMPHRPVLVPGTVRENLELLGPVPGLDEVCRSVG 408
Query 427 FDAVLDELPRGLDTVLGRGGVGLSLGQRQRLGLARALGSPAAVLLLDEPTAHLDARTEQH 486
FD VL ELP G +T LGRGGVGLSLGQRQRLGL RALG+PA VLLLDEPTAHLD E
Sbjct 409 FDEVLGELPDGSETPLGRGGVGLSLGQRQRLGLVRALGAPADVLLLDEPTAHLDGALEDR 468
Query 487 VLGAIVERARAGATVLVVAHRQQVAAAGDRVVEVNSD 523
VL AIV RARAGATV++V HR V AA D VV + S
Sbjct 469 VLAAIVARARAGATVVMVGHRAPVLAAADHVVTMESS 505
>gi|120403812|ref|YP_953641.1| ABC transporter transmembrane protein [Mycobacterium vanbaalenii
PYR-1]
gi|119956630|gb|ABM13635.1| ABC transporter, transmembrane region, type 1 [Mycobacterium
vanbaalenii PYR-1]
Length=520
Score = 560 bits (1443), Expect = 2e-157, Method: Compositional matrix adjust.
Identities = 326/521 (63%), Positives = 371/521 (72%), Gaps = 17/521 (3%)
Query 2 ACGVGISGCAIGSAIVLASIVAGVI-DPANPGMAGLRRWLGPLSILLVLWGLRASIQWLQ 60
ACGV I+ C I SA+VLA IVA VI DPA+ + L P++ILL LW RA QW Q
Sbjct 10 ACGVLIAACTIASAVVLAGIVARVITDPASRSVGELST---PIAILLALWVFRALAQWRQ 66
Query 61 ARLAQRGASAVIADLSGQVLTAVTARRPSQLAAQRDAAAVLITRGLDGLRPYFTGYLPTL 120
RL Q GASAVIADLS QVLT T+ P QLAA RD AAV+ITRGLDGLR YFT YLP+L
Sbjct 67 GRLGQHGASAVIADLSDQVLTTATSLPPRQLAAHRDEAAVVITRGLDGLRVYFTTYLPSL 126
Query 121 LLAAILTPATVAVIGLYDLKSMAIVVITLPLIPIFMVLIGLATTNPSAAALAAMTAVQAR 180
LAA+LTPAT VI YD KS IV I LPLIP+FMVLIGLAT + SAAALAAM +Q+R
Sbjct 127 FLAAVLTPATAVVIAFYDWKSALIVTIALPLIPVFMVLIGLATADRSAAALAAMATLQSR 186
Query 181 LLDLIAGIPTLRALGRASGPEQRIAELSADHRRSAMATLRIAFLSALVLELLATLGVALV 240
LLDL+AG+PTLRALGR G RIAEL A HRRSAMAT+RIAFLSALVLELLATLGVALV
Sbjct 187 LLDLVAGLPTLRALGRTGGAAARIAELGAAHRRSAMATMRIAFLSALVLELLATLGVALV 246
Query 241 AVGIGLRLVFGEMSLTAGLTVLLLAPEVYWPLRRVGVQFHAAADGRTAADKAFALLGESP 300
AVG+G+RLV+GEM+L+AGLT LLLAPEV+WPLRRVG FH+A DG+TA AF + +
Sbjct 247 AVGVGMRLVYGEMTLSAGLTALLLAPEVFWPLRRVGAAFHSAQDGKTALQAAFRFIDTAE 306
Query 301 SPTPGRRTVTARGGVIRLERLSVRGRDGRAPYDLTADIEPGRVTVLTGRNGAGKSTTLQA 360
P G V + ++ +LTA PGRVTVLTG NG GKST LQA
Sbjct 307 PPGAGTLGVPGDSVTVEVDD-----------PELTAG--PGRVTVLTGPNGIGKSTLLQA 353
Query 361 IAGLTAPSSGRITVAGVDVTNLAPAAWWRQLSWLPQRPVLVPGTVRHNLVLLGPVDDLER 420
I GL P+ G I + GV+V L P WW +++WL QRPVL+PGTV+ NL L GP+ DL
Sbjct 354 ILGLDRPTGGGIRINGVEVAELDPQQWWPKVAWLAQRPVLIPGTVQENLELFGPLPDLRS 413
Query 421 ACAAAGFDAVLDELPRGLDTVLGRGGVGLSLGQRQRLGLARALGSPAAVLLLDEPTAHLD 480
AC AA FD VL LP GL TV+GRGGVGLSLGQRQRLGL R LGS A +LL DEPTAHLD
Sbjct 414 ACRAACFDEVLATLPDGLQTVIGRGGVGLSLGQRQRLGLVRVLGSAAPLLLFDEPTAHLD 473
Query 481 ARTEQHVLGAIVERARAGATVLVVAHRQQVAAAGDRVVEVN 521
TE VL AI RA GATV+VV HR + GD VV +
Sbjct 474 GPTEARVLDAITRRAADGATVVVVGHRDPILEIGDAVVRMG 514
>gi|289761769|ref|ZP_06521147.1| transmembrane ATP-binding protein ABC transporter cydD [Mycobacterium
tuberculosis GM 1503]
gi|289709275|gb|EFD73291.1| transmembrane ATP-binding protein ABC transporter cydD [Mycobacterium
tuberculosis GM 1503]
Length=343
Score = 560 bits (1443), Expect = 3e-157, Method: Compositional matrix adjust.
Identities = 290/290 (100%), Positives = 290/290 (100%), Gaps = 0/290 (0%)
Query 238 ALVAVGIGLRLVFGEMSLTAGLTVLLLAPEVYWPLRRVGVQFHAAADGRTAADKAFALLG 297
ALVAVGIGLRLVFGEMSLTAGLTVLLLAPEVYWPLRRVGVQFHAAADGRTAADKAFALLG
Sbjct 54 ALVAVGIGLRLVFGEMSLTAGLTVLLLAPEVYWPLRRVGVQFHAAADGRTAADKAFALLG 113
Query 298 ESPSPTPGRRTVTARGGVIRLERLSVRGRDGRAPYDLTADIEPGRVTVLTGRNGAGKSTT 357
ESPSPTPGRRTVTARGGVIRLERLSVRGRDGRAPYDLTADIEPGRVTVLTGRNGAGKSTT
Sbjct 114 ESPSPTPGRRTVTARGGVIRLERLSVRGRDGRAPYDLTADIEPGRVTVLTGRNGAGKSTT 173
Query 358 LQAIAGLTAPSSGRITVAGVDVTNLAPAAWWRQLSWLPQRPVLVPGTVRHNLVLLGPVDD 417
LQAIAGLTAPSSGRITVAGVDVTNLAPAAWWRQLSWLPQRPVLVPGTVRHNLVLLGPVDD
Sbjct 174 LQAIAGLTAPSSGRITVAGVDVTNLAPAAWWRQLSWLPQRPVLVPGTVRHNLVLLGPVDD 233
Query 418 LERACAAAGFDAVLDELPRGLDTVLGRGGVGLSLGQRQRLGLARALGSPAAVLLLDEPTA 477
LERACAAAGFDAVLDELPRGLDTVLGRGGVGLSLGQRQRLGLARALGSPAAVLLLDEPTA
Sbjct 234 LERACAAAGFDAVLDELPRGLDTVLGRGGVGLSLGQRQRLGLARALGSPAAVLLLDEPTA 293
Query 478 HLDARTEQHVLGAIVERARAGATVLVVAHRQQVAAAGDRVVEVNSDGFRR 527
HLDARTEQHVLGAIVERARAGATVLVVAHRQQVAAAGDRVVEVNSDGFRR
Sbjct 294 HLDARTEQHVLGAIVERARAGATVLVVAHRQQVAAAGDRVVEVNSDGFRR 343
>gi|315444506|ref|YP_004077385.1| cysteine export CydDC family ABC transporter permease subunit/ATP-binding
protein CydD [Mycobacterium sp. Spyr1]
gi|315262809|gb|ADT99550.1| cysteine export CydDC family ABC transporter permease subunit/ATP-binding
protein CydD [Mycobacterium sp. Spyr1]
Length=520
Score = 544 bits (1402), Expect = 1e-152, Method: Compositional matrix adjust.
Identities = 325/520 (63%), Positives = 378/520 (73%), Gaps = 17/520 (3%)
Query 2 ACGVGISGCAIGSAIVLASIVAGVI-DPANPGMAGLRRWLGPLSILLVLWGLRASIQWLQ 60
A GV I+ C I SA+VLAS+VA V+ DP + + L PL+IL+ LW +R W Q
Sbjct 10 AYGVLIAACTIASAVVLASLVARVVTDPVSRSVEAL---AAPLAILVSLWTVRVVAHWQQ 66
Query 61 ARLAQRGASAVIADLSGQVLTAVTARRPSQLAAQRDAAAVLITRGLDGLRPYFTGYLPTL 120
R+AQ GASAVIADL+ QVL A T+ P +LA +RD AAV+ITRGLDGLR YFT YLP+L
Sbjct 67 GRVAQHGASAVIADLTDQVLRAATSLPPRELATRRDEAAVVITRGLDGLRVYFTAYLPSL 126
Query 121 LLAAILTPATVAVIGLYDLKSMAIVVITLPLIPIFMVLIGLATTNPSAAALAAMTAVQAR 180
LLA +LTP T AVI YD +S IV I LPLIPIFM+LIG+AT + S AAL+AMT +Q+R
Sbjct 127 LLAVLLTPTTAAVIAWYDWRSAVIVAIALPLIPIFMILIGMATADRSEAALSAMTTLQSR 186
Query 181 LLDLIAGIPTLRALGRASGPEQRIAELSADHRRSAMATLRIAFLSALVLELLATLGVALV 240
LLDL+AG+PTLRAL R G RIAELSA HRRSAMAT+RIAFLSALVLELLATLGVALV
Sbjct 187 LLDLVAGLPTLRALDRTRGAATRIAELSAAHRRSAMATMRIAFLSALVLELLATLGVALV 246
Query 241 AVGIGLRLVFGEMSLTAGLTVLLLAPEVYWPLRRVGVQFHAAADGRTAADKAFALLGESP 300
AVG+G+RLVFG+M+LTAGLT LLLAPE +WPLRRVG FH+A DG+TA + AF L ++P
Sbjct 247 AVGVGMRLVFGDMTLTAGLTALLLAPEAFWPLRRVGAAFHSAQDGKTAVEAAFRFLDDAP 306
Query 301 SPTPGRRTVTARGGVIRLERLSVRGRDGRAPYDLTADIEPGRVTVLTGRNGAGKSTTLQA 360
+ G R + + ++ D EPGRVTVLTG NGAGKST LQA
Sbjct 307 ASPAGTRAIPDHPLTVEVD-------------DPALTAEPGRVTVLTGPNGAGKSTLLQA 353
Query 361 IAGLTAPSSGRITVAGVDVTNLAPAAWWRQLSWLPQRPVLVPGTVRHNLVLLGPVDDLER 420
I GL P +GRI V GV+V L WW +++WL QRPVL+PGTVR NL L GP+ DLE
Sbjct 354 ILGLGPPPTGRIRVDGVEVAELDLRQWWTRVAWLAQRPVLIPGTVRDNLELFGPLPDLES 413
Query 421 ACAAAGFDAVLDELPRGLDTVLGRGGVGLSLGQRQRLGLARALGSPAAVLLLDEPTAHLD 480
AC AA FD VL LP G DTV+GRGGVGLSLGQRQRLGLAR LGSPAAVLL DEPTAHLD
Sbjct 414 ACRAACFDEVLATLPDGADTVIGRGGVGLSLGQRQRLGLARVLGSPAAVLLFDEPTAHLD 473
Query 481 ARTEQHVLGAIVERARAGATVLVVAHRQQVAAAGDRVVEV 520
TE VL AI RA GATV+VV HR V A GD VV++
Sbjct 474 GPTEARVLAAIARRAADGATVIVVGHRDPVLAIGDVVVDM 513
>gi|145224171|ref|YP_001134849.1| ABC transporter, transmembrane region, type 1 [Mycobacterium
gilvum PYR-GCK]
gi|145216657|gb|ABP46061.1| ABC transporter, transmembrane region, type 1 [Mycobacterium
gilvum PYR-GCK]
Length=520
Score = 544 bits (1401), Expect = 2e-152, Method: Compositional matrix adjust.
Identities = 325/520 (63%), Positives = 378/520 (73%), Gaps = 17/520 (3%)
Query 2 ACGVGISGCAIGSAIVLASIVAGVI-DPANPGMAGLRRWLGPLSILLVLWGLRASIQWLQ 60
A GV I+ C I SA+VLAS+VA V+ DP + + L PL+IL+ LW +R W Q
Sbjct 10 AYGVLIAACTIASAVVLASLVARVVTDPVSRSVEAL---AAPLAILVSLWTVRVLAHWQQ 66
Query 61 ARLAQRGASAVIADLSGQVLTAVTARRPSQLAAQRDAAAVLITRGLDGLRPYFTGYLPTL 120
R+AQ GASAVIADL+ QVL A T+ P +LA +RD AAV+ITRGLDGLR YFT YLP+L
Sbjct 67 GRVAQHGASAVIADLTDQVLRAATSLPPRELATRRDEAAVVITRGLDGLRVYFTAYLPSL 126
Query 121 LLAAILTPATVAVIGLYDLKSMAIVVITLPLIPIFMVLIGLATTNPSAAALAAMTAVQAR 180
LLA +LTP T AVI YD +S IV I LPLIPIFM+LIG+AT + S AAL+AMT +Q+R
Sbjct 127 LLAVLLTPTTAAVIAWYDWRSAVIVAIALPLIPIFMILIGMATADRSEAALSAMTTLQSR 186
Query 181 LLDLIAGIPTLRALGRASGPEQRIAELSADHRRSAMATLRIAFLSALVLELLATLGVALV 240
LLDL+AG+PTLRAL R G RIAELSA HRRSAMAT+RIAFLSALVLELLATLGVALV
Sbjct 187 LLDLVAGLPTLRALDRTRGAATRIAELSAAHRRSAMATMRIAFLSALVLELLATLGVALV 246
Query 241 AVGIGLRLVFGEMSLTAGLTVLLLAPEVYWPLRRVGVQFHAAADGRTAADKAFALLGESP 300
AVG+G+RLVFG+M+LTAGLT LLLAPE +WPLRRVG FH+A DG+TA + AF L ++P
Sbjct 247 AVGVGMRLVFGDMTLTAGLTALLLAPEAFWPLRRVGAAFHSAQDGKTAVEAAFRFLDDAP 306
Query 301 SPTPGRRTVTARGGVIRLERLSVRGRDGRAPYDLTADIEPGRVTVLTGRNGAGKSTTLQA 360
+ G R + + ++ D EPGRVTVLTG NGAGKST LQA
Sbjct 307 ASPAGTRAIPDHPLTVEVD-------------DPALTAEPGRVTVLTGPNGAGKSTLLQA 353
Query 361 IAGLTAPSSGRITVAGVDVTNLAPAAWWRQLSWLPQRPVLVPGTVRHNLVLLGPVDDLER 420
I GL P +GRI V GV+V L WW +++WL QRPVL+PGTVR NL L GP+ DLE
Sbjct 354 ILGLGPPPTGRIRVDGVEVAELDLRQWWTRVAWLAQRPVLIPGTVRDNLELFGPLPDLES 413
Query 421 ACAAAGFDAVLDELPRGLDTVLGRGGVGLSLGQRQRLGLARALGSPAAVLLLDEPTAHLD 480
AC AA FD VL LP G DTV+GRGGVGLSLGQRQRLGLAR LGSPAAVLL DEPTAHLD
Sbjct 414 ACRAACFDEVLATLPDGADTVIGRGGVGLSLGQRQRLGLARVLGSPAAVLLFDEPTAHLD 473
Query 481 ARTEQHVLGAIVERARAGATVLVVAHRQQVAAAGDRVVEV 520
TE VL AI RA GATV+VV HR V A GD VV++
Sbjct 474 GPTEARVLAAIARRAADGATVIVVGHRDPVLAIGDVVVDM 513
>gi|169629717|ref|YP_001703366.1| ABC transporter ATP-binding protein [Mycobacterium abscessus
ATCC 19977]
gi|169241684|emb|CAM62712.1| Probable ATP-binding protein ABC transporter CydD [Mycobacterium
abscessus]
Length=557
Score = 526 bits (1355), Expect = 3e-147, Method: Compositional matrix adjust.
Identities = 296/526 (57%), Positives = 363/526 (70%), Gaps = 6/526 (1%)
Query 1 VACGVGISGCAIGSAIVLASIVAGVIDPANPGMAGLRRWLGPLSILLVLWGLRASIQWLQ 60
V C + ++GC + AIVLA ++ +I NP L P+ +L LW LRA +Q
Sbjct 28 VLCELVMTGCTLVIAIVLAQALSQLI--TNPAARDLPHMWQPIILLSALWALRALAHGVQ 85
Query 61 ARLAQRGASAVIADLSGQVLTAVTARRPSQLAAQRDAAAVLITRGLDGLRPYFTGYLPTL 120
R ++RGA+ VIADL Q+L+AV +P L RD+A ++TRGLD LRPYF GYLP L
Sbjct 86 VRFSERGATGVIADLDDQLLSAVAQVQPRDLEQHRDSATEVLTRGLDDLRPYFAGYLPAL 145
Query 121 LLAAILTPATVAVIGLYDLKSMAIVVITLPLIPIFMVLIGLATTNPSAAALAAMTAVQAR 180
L AAI+TPA VI L D++S IV ITLPLIP+FM+LIGL T + +A ALAA TA +
Sbjct 146 LSAAIVTPAAAVVIALSDIRSALIVAITLPLIPVFMILIGLLTRDRAATALAASTAATGQ 205
Query 181 LLDLIAGIPTLRALGRASGPEQRIAELSADHRRSAMATLRIAFLSALVLELLATLGVALV 240
++DLIAGIPTLRALGR + P +RIAEL RRS MATLR+AFLSA+VLE++ATL VAL+
Sbjct 206 IVDLIAGIPTLRALGRTATPLRRIAELGTAQRRSVMATLRVAFLSAMVLEMIATLSVALI 265
Query 241 AVGIGLRLVFGEMSLTAGLTVLLLAPEVYWPLRRVGVQFHAAADGRTAADKAFALLG--- 297
AV IG+RLVFG + LT LTVL+LAPEVYWPLRRVG+QFH+AADG AAD+AF LL
Sbjct 266 AVSIGMRLVFGHLDLTTALTVLILAPEVYWPLRRVGIQFHSAADGTAAADRAFELLDTLT 325
Query 298 -ESPSPTPGRRTVTARGGVIRLERLSVRGRDGRAPYDLTADIEPGRVTVLTGRNGAGKST 356
P P R I LE +SV R G AP++LTA I PG VTVLTG NGAGKST
Sbjct 326 PSMPGPVAAPVQAPPRRPTIGLEAISVLDRGGYAPWELTATIRPGAVTVLTGHNGAGKST 385
Query 357 TLQAIAGLTAPSSGRITVAGVDVTNLAPAAWWRQLSWLPQRPVLVPGTVRHNLVLLGPVD 416
L AI GL P++GR+ + G+ + + WW + WLPQRPVL+PGTVR NL + G ++
Sbjct 386 ALHAITGLAVPATGRVLLDGMTLEQIERDTWWSMIGWLPQRPVLIPGTVRENLEIFGQLE 445
Query 417 DLERACAAAGFDAVLDELPRGLDTVLGRGGVGLSLGQRQRLGLARALGSPAAVLLLDEPT 476
DLE A A + FD V+ LP GLDT LG GG GLSLG+RQRL LAR LG+ +LLLDEPT
Sbjct 446 DLESALADSQFDTVVAALPHGLDTRLGTGGAGLSLGERQRLSLARVLGTNRPILLLDEPT 505
Query 477 AHLDARTEQHVLGAIVERARAGATVLVVAHRQQVAAAGDRVVEVNS 522
AHLDA TE VL A+V RAR GATV++V HR V AA D + V +
Sbjct 506 AHLDADTEAAVLAALVSRARQGATVVLVGHRAPVLAAADEIFTVQA 551
>gi|229489007|ref|ZP_04382873.1| ABC transporter, CydDC cysteine exporter family, permease/ATP-binding
protein CydD [Rhodococcus erythropolis SK121]
gi|229324511|gb|EEN90266.1| ABC transporter, CydDC cysteine exporter family, permease/ATP-binding
protein CydD [Rhodococcus erythropolis SK121]
Length=562
Score = 499 bits (1285), Expect = 5e-139, Method: Compositional matrix adjust.
Identities = 273/468 (59%), Positives = 335/468 (72%), Gaps = 3/468 (0%)
Query 58 WLQARLAQRGASAVIADLSGQVLTAVTARRPSQLAAQRDAAAVLITRGLDGLRPYFTGYL 117
WLQ R A R ++ V+A++ VLT+ TA P L +RD A ++TRG+DGL PY TGYL
Sbjct 92 WLQTRYAHRASTRVVAEIKNGVLTSATAMSPRDLDPRRDEIATVVTRGVDGLGPYLTGYL 151
Query 118 PTLLLAAILTPATVAVIGLYDLKSMAIVVITLPLIPIFMVLIGLATTNPSAAALAAMTAV 177
P L+L+ LTP T+ VI + D+ S I+ +TLPLIPIFM+LIGL T S LAAMT +
Sbjct 152 PALVLSVTLTPITLIVIAVQDMTSAVIIFVTLPLIPIFMILIGLLTKGKSEKTLAAMTTL 211
Query 178 QARLLDLIAGIPTLRALGRASGPEQRIAELSADHRRSAMATLRIAFLSALVLELLATLGV 237
++LLDL+AG+PTLRALGR GP +R+ EL HRR+ M+ LR+AFLS++VLELLATL V
Sbjct 212 SSQLLDLLAGLPTLRALGRQQGPAERVRELGDAHRRTTMSALRVAFLSSMVLELLATLCV 271
Query 238 ALVAVGIGLRLVFGEMSLTAGLTVLLLAPEVYWPLRRVGVQFHAAADGRTAADKAFALL- 296
ALVAV IGLRLV+G+MSL G+ L+LAPEVY PLR VG QFHAA DG AADKAF ++
Sbjct 272 ALVAVSIGLRLVYGDMSLEPGIVALILAPEVYLPLRMVGTQFHAAEDGMAAADKAFEVIE 331
Query 297 GESPSPTPGRRTVTARGGVIRLERLSVRGRDGRAPYDLTADIEPGRVTVLTGRNGAGKST 356
+S +P G TV ARG I + L V R G AP L+A PG +TVLTG NG GKST
Sbjct 332 ADSAAPEGGSTTVVARGADIVFDGLGVTSRGGVAPSRLSAVASPGAITVLTGPNGCGKST 391
Query 357 TLQAIAGLTAPSSGRITVAGVDVTNLAPAAWWRQLSWLPQRPVLVPGTVRHNLVLLGPVD 416
+ A+ GL PSSGR+TVAGVDV +L AWW QL+WLPQ PVL+PGT+R NL L G V+
Sbjct 392 AVHALLGLIEPSSGRVTVAGVDVRDLDEHAWWSQLAWLPQHPVLLPGTIRENLDLTGAVE 451
Query 417 D--LERACAAAGFDAVLDELPRGLDTVLGRGGVGLSLGQRQRLGLARALGSPAAVLLLDE 474
L RA AA GFDAVL ELP G++TV+G GG GLSLGQRQRL L R L S AVL+LDE
Sbjct 452 SQALARAAAATGFDAVLAELPAGVETVIGVGGTGLSLGQRQRLALTRVLASDRAVLVLDE 511
Query 475 PTAHLDARTEQHVLGAIVERARAGATVLVVAHRQQVAAAGDRVVEVNS 522
PTAHLD+ +E VL ++ RA G TV+V+ HR V AA DR+VEV++
Sbjct 512 PTAHLDSDSEGTVLASLRARAERGDTVVVIGHRPSVLAAADRIVEVHA 559
>gi|226308303|ref|YP_002768263.1| ABC transporter permease/ATP-binding protein CydD [Rhodococcus
erythropolis PR4]
gi|226187420|dbj|BAH35524.1| putative ABC transporter permease/ATP-binding protein CydD [Rhodococcus
erythropolis PR4]
Length=562
Score = 499 bits (1284), Expect = 6e-139, Method: Compositional matrix adjust.
Identities = 283/514 (56%), Positives = 353/514 (69%), Gaps = 6/514 (1%)
Query 12 IGSAIVLASIVAGVIDPANPGMAGLRRWLGPLSILLVLWGLRASIQWLQARLAQRGASAV 71
I +A+++ ++AGVI ++ W L +L +R WLQ R A R ++ V
Sbjct 49 IVAALMIGRVLAGVITTRTVDVSS---WTTELVVLAAAVTVRVLGTWLQTRYAHRASTRV 105
Query 72 IADLSGQVLTAVTARRPSQLAAQRDAAAVLITRGLDGLRPYFTGYLPTLLLAAILTPATV 131
+A++ VLT+ TA P L +RD A ++TRG+DGL PY TGYLP L+L+ LTP T+
Sbjct 106 VAEIKNGVLTSATAMSPRDLDPRRDEIATVVTRGVDGLGPYLTGYLPALVLSVTLTPITL 165
Query 132 AVIGLYDLKSMAIVVITLPLIPIFMVLIGLATTNPSAAALAAMTAVQARLLDLIAGIPTL 191
VI + D+ S I+ +TLPLIPIFM+LIGL T S LAAMT + ++LLDL+AG+PTL
Sbjct 166 IVIAVQDMTSAVIIFVTLPLIPIFMILIGLLTKGKSEKTLAAMTTLSSQLLDLLAGLPTL 225
Query 192 RALGRASGPEQRIAELSADHRRSAMATLRIAFLSALVLELLATLGVALVAVGIGLRLVFG 251
RALGR GP +R+ EL HRR+ M+ LR+AFLS++VLELLATL VALVAV IGLRLV+G
Sbjct 226 RALGRQQGPAERVRELGDAHRRTTMSALRVAFLSSMVLELLATLCVALVAVSIGLRLVYG 285
Query 252 EMSLTAGLTVLLLAPEVYWPLRRVGVQFHAAADGRTAADKAFALL-GESPSPTPGRRTVT 310
+MSL G+ L+LAPEVY PLR VG QFHAA DG AADKAF ++ +S +P G TV
Sbjct 286 DMSLEPGIVALILAPEVYLPLRMVGTQFHAAEDGMAAADKAFEVIEADSAAPEGGSTTVV 345
Query 311 ARGGVIRLERLSVRGRDGRAPYDLTADIEPGRVTVLTGRNGAGKSTTLQAIAGLTAPSSG 370
A G I + L V R G AP L+A PG +TVLTG NG GKST + A+ GL PSSG
Sbjct 346 ACGADIVFDGLGVTSRGGVAPSQLSAVASPGAITVLTGPNGCGKSTAVHALLGLIEPSSG 405
Query 371 RITVAGVDVTNLAPAAWWRQLSWLPQRPVLVPGTVRHNLVLLGPVD--DLERACAAAGFD 428
R+TVAGVDV +L AWW QL+WLPQ PVL+PGTVR NL L G VD L RA AA GFD
Sbjct 406 RVTVAGVDVRDLDEHAWWSQLAWLPQHPVLLPGTVRENLDLTGVVDAQALARAAAATGFD 465
Query 429 AVLDELPRGLDTVLGRGGVGLSLGQRQRLGLARALGSPAAVLLLDEPTAHLDARTEQHVL 488
AVL ELP G++TV+G GG GLSLGQRQRL L R L S A+L+LDEPTAHLD+ +E VL
Sbjct 466 AVLAELPAGVETVIGVGGTGLSLGQRQRLALTRVLASDRALLVLDEPTAHLDSDSEGTVL 525
Query 489 GAIVERARAGATVLVVAHRQQVAAAGDRVVEVNS 522
++ RA G TV+V+ HR V AA DR+VEV +
Sbjct 526 ASLRARAERGDTVVVIGHRPSVLAAADRIVEVRA 559
>gi|325674770|ref|ZP_08154457.1| cysteine/glutathione ABC superfamily ATP binding cassette transporter,
ABC protein [Rhodococcus equi ATCC 33707]
gi|325554356|gb|EGD24031.1| cysteine/glutathione ABC superfamily ATP binding cassette transporter,
ABC protein [Rhodococcus equi ATCC 33707]
Length=579
Score = 499 bits (1284), Expect = 7e-139, Method: Compositional matrix adjust.
Identities = 285/516 (56%), Positives = 348/516 (68%), Gaps = 8/516 (1%)
Query 12 IGSAIVLASIVAGVIDPANPGMAGLRRWLGPLSILLVLWGLRASIQWLQARLAQRGASAV 71
I SA+++ +I+AGVI +A W L L +R S WL AR A R A+ V
Sbjct 56 IVSAVLIGTILAGVITSDRRSIAD---WRTDLLWLAAAVVVRVSAAWLHARYAHRAANRV 112
Query 72 IADLSGQVLTAVTARRPSQLAAQRDAAAVLITRGLDGLRPYFTGYLPTLLLAAILTPATV 131
+A+L +VL + T P L +RD A ++TRG+ GL PY TGYLP L+LAA LTPAT
Sbjct 113 VAELEVEVLESATRMSPRDLDPRRDEIATVLTRGIRGLAPYLTGYLPALILAATLTPATF 172
Query 132 AVIGLYDLKSMAIVVITLPLIPIFMVLIGLATTNPSAAALAAMTAVQARLLDLIAGIPTL 191
VI L DL + IVVITLPLIP+FM+LIGL T S A L AMT + +L+DL+AG+PTL
Sbjct 173 VVIALQDLTAAMIVVITLPLIPVFMILIGLLTKGKSEANLGAMTRLSGQLMDLLAGLPTL 232
Query 192 RALGRASGPEQRIAELSADHRRSAMATLRIAFLSALVLELLATLGVALVAVGIGLRLVFG 251
RALGR GP R+ EL HR++ M++LR+AFLS++VLE+LATL VAL+AV IGLRLVFG
Sbjct 233 RALGREHGPAARVRELGDAHRKTTMSSLRVAFLSSMVLEMLATLSVALIAVSIGLRLVFG 292
Query 252 EMSLTAGLTVLLLAPEVYWPLRRVGVQFHAAADGRTAADKAFALLGESPS-PTPGRRTVT 310
M L G+ L+LAPEVY PLR VG+QFHAA DG AADKAFA++ E+P+ G +
Sbjct 293 NMELEPGIVALILAPEVYLPLRMVGMQFHAAEDGLAAADKAFAVIDEAPARREAGTGSEV 352
Query 311 ARGGVIRLERLSVRGRDGRAPYDLTADIEPGRVTVLTGRNGAGKSTTLQAIAGLTAPSSG 370
+ L +SV R G AP+ L PG+VTVLTG NG+GKST LQ I GL P+ G
Sbjct 353 PADNSVELVGVSVHSRSGLAPHRLDVSCRPGQVTVLTGANGSGKSTALQVILGLAEPAEG 412
Query 371 RITVAGVDVTNLAPAAWWRQLSWLPQRPVLVPGTVRHNLVLLGPVDD----LERACAAAG 426
+ V GVDV +L WW +++WLPQ PVLVPGT+ NL L+GPVD L RAC A G
Sbjct 413 AVRVGGVDVAHLDRTRWWDRIAWLPQHPVLVPGTLGENLALVGPVDPGSDALHRACRATG 472
Query 427 FDAVLDELPRGLDTVLGRGGVGLSLGQRQRLGLARALGSPAAVLLLDEPTAHLDARTEQH 486
FDAVL ELPRG DTV+G GG GLSLGQRQRL L R L SP VLLLDEPTAHLD TE+
Sbjct 473 FDAVLAELPRGWDTVVGVGGTGLSLGQRQRLALTRLLVSPRPVLLLDEPTAHLDDDTERT 532
Query 487 VLGAIVERARAGATVLVVAHRQQVAAAGDRVVEVNS 522
VL ++ + A G TV+VV HR V AAGDRVV V +
Sbjct 533 VLTSLRDLAGKGRTVVVVGHRPTVLAAGDRVVRVEA 568
>gi|312138312|ref|YP_004005648.1| ABC transporter ATPase [Rhodococcus equi 103S]
gi|311887651|emb|CBH46963.1| putative ABC transporter ATPase subunit [Rhodococcus equi 103S]
Length=579
Score = 496 bits (1278), Expect = 3e-138, Method: Compositional matrix adjust.
Identities = 285/516 (56%), Positives = 347/516 (68%), Gaps = 8/516 (1%)
Query 12 IGSAIVLASIVAGVIDPANPGMAGLRRWLGPLSILLVLWGLRASIQWLQARLAQRGASAV 71
I SA+++ +I+AGVI +A W L L +R S WL AR A R A+ V
Sbjct 56 IVSAVLIGTILAGVITSDRRSIAD---WRTDLLWLAAAVVVRVSAAWLHARYAHRAANRV 112
Query 72 IADLSGQVLTAVTARRPSQLAAQRDAAAVLITRGLDGLRPYFTGYLPTLLLAAILTPATV 131
+A+L +VL + T P L +RD A ++TRG+ GL PY TGYLP L+LAA LTPAT
Sbjct 113 VAELEVEVLESATRMSPRDLDPRRDEIATVLTRGIRGLAPYLTGYLPALILAATLTPATF 172
Query 132 AVIGLYDLKSMAIVVITLPLIPIFMVLIGLATTNPSAAALAAMTAVQARLLDLIAGIPTL 191
VI L DL + IVVITLPLIP+FM+LIGL T S A L AMT + +L+DL+AG+PTL
Sbjct 173 VVIALQDLTAAMIVVITLPLIPVFMILIGLLTKGKSEANLGAMTRLSGQLMDLLAGLPTL 232
Query 192 RALGRASGPEQRIAELSADHRRSAMATLRIAFLSALVLELLATLGVALVAVGIGLRLVFG 251
RALGR GP R+ EL HR++ M++LR+AFLS++VLE+LATL VAL+AV IGLRLVFG
Sbjct 233 RALGREHGPAARVRELGDAHRKTTMSSLRVAFLSSMVLEMLATLSVALIAVSIGLRLVFG 292
Query 252 EMSLTAGLTVLLLAPEVYWPLRRVGVQFHAAADGRTAADKAFALLGESPS-PTPGRRTVT 310
M L G+ L+LAPEVY PLR VG+QFHAA DG AADKAFA++ E+P+ G +
Sbjct 293 NMELEPGIVALILAPEVYLPLRMVGMQFHAAEDGLAAADKAFAVIDEAPARREAGTGSEV 352
Query 311 ARGGVIRLERLSVRGRDGRAPYDLTADIEPGRVTVLTGRNGAGKSTTLQAIAGLTAPSSG 370
+ L +SV R G AP+ L PG+VTVLTG NG+GKST LQ I GL P+ G
Sbjct 353 PADNSVELVGVSVHSRSGLAPHRLDVSCRPGQVTVLTGANGSGKSTALQVILGLAEPAEG 412
Query 371 RITVAGVDVTNLAPAAWWRQLSWLPQRPVLVPGTVRHNLVLLGPVDD----LERACAAAG 426
+ V GVDV L WW +++WLPQ PVLVPGT+ NL L+GPVD L RAC A G
Sbjct 413 AVRVGGVDVAYLDRTRWWDRIAWLPQHPVLVPGTLGDNLALVGPVDPGSDALHRACRATG 472
Query 427 FDAVLDELPRGLDTVLGRGGVGLSLGQRQRLGLARALGSPAAVLLLDEPTAHLDARTEQH 486
FDAVL ELPRG DTV+G GG GLSLGQRQRL L R L SP VLLLDEPTAHLD TE+
Sbjct 473 FDAVLAELPRGWDTVVGVGGTGLSLGQRQRLALTRLLVSPRPVLLLDEPTAHLDDDTERT 532
Query 487 VLGAIVERARAGATVLVVAHRQQVAAAGDRVVEVNS 522
VL ++ + A G TV+VV HR V AAGDRVV V +
Sbjct 533 VLTSLRDLAGKGRTVVVVGHRPTVLAAGDRVVRVEA 568
>gi|226364342|ref|YP_002782124.1| ABC transporter permease/ATP-binding protein CydD [Rhodococcus
opacus B4]
gi|226242831|dbj|BAH53179.1| putative ABC transporter permease/ATP-binding protein CydD [Rhodococcus
opacus B4]
Length=562
Score = 483 bits (1242), Expect = 5e-134, Method: Compositional matrix adjust.
Identities = 283/514 (56%), Positives = 353/514 (69%), Gaps = 6/514 (1%)
Query 12 IGSAIVLASIVAGVI-DPANPGMAGLRRWLGPLSILLVLWGLRASIQWLQARLAQRGASA 70
I SA+++ ++ GVI D A L RW L +L V G+R WLQ+R A R A+
Sbjct 51 IVSALMIGRVLGGVIVDDAT----DLGRWSTELVVLAVAVGIRVLGTWLQSRFAHRSATR 106
Query 71 VIADLSGQVLTAVTARRPSQLAAQRDAAAVLITRGLDGLRPYFTGYLPTLLLAAILTPAT 130
V+A+L G+VL T RP +L +RD A ++TRG+DGL PY TGYLP L+LA LTPAT
Sbjct 107 VVAELKGEVLGVATRMRPRELDPRRDEIATVLTRGIDGLVPYLTGYLPALVLAGTLTPAT 166
Query 131 VAVIGLYDLKSMAIVVITLPLIPIFMVLIGLATTNPSAAALAAMTAVQARLLDLIAGIPT 190
+ VI DL S AI+ +TLPLIP+FM+LIGL T +A L AMT + ++LLDL+AG+PT
Sbjct 167 LVVIAFQDLTSAAIIFVTLPLIPVFMILIGLLTKGKAAKTLTAMTTLSSQLLDLLAGLPT 226
Query 191 LRALGRASGPEQRIAELSADHRRSAMATLRIAFLSALVLELLATLGVALVAVGIGLRLVF 250
LRALGR GP R+ EL HRR+ M+ LR+AFLS++VLELLATL VALVAV IGLRLV+
Sbjct 227 LRALGREQGPVTRVRELGDAHRRTTMSALRVAFLSSMVLELLATLCVALVAVSIGLRLVY 286
Query 251 GEMSLTAGLTVLLLAPEVYWPLRRVGVQFHAAADGRTAADKAFALLGESPS-PTPGRRTV 309
G M L AG+ L+LAPEVY PLRRVG QFHAA DG AA +AFA++ S + G V
Sbjct 287 GGMELEAGIVALILAPEVYLPLRRVGTQFHAAEDGMAAASRAFAVIDTDLSVDSDGAVVV 346
Query 310 TARGGVIRLERLSVRGRDGRAPYDLTADIEPGRVTVLTGRNGAGKSTTLQAIAGLTAPSS 369
A G + + L VR R G AP+ LT +EPG VTVLTG NG+GK+T + A+ GL P+
Sbjct 347 DANGARLEFDGLDVRSRRGPAPHRLTGVVEPGVVTVLTGPNGSGKTTAVHALLGLVEPAR 406
Query 370 GRITVAGVDVTNLAPAAWWRQLSWLPQRPVLVPGTVRHNLVLLGPVDDLERACAAAGFDA 429
G + VAG V +L +AWW Q++WLPQ PVLVPGT+ NL L G V DLE+ACAA GFD
Sbjct 407 GDVRVAGAPVGSLDRSAWWAQVAWLPQHPVLVPGTLDENLRLTGDVVDLEQACAATGFDE 466
Query 430 VLDELPRGLDTVLGRGGVGLSLGQRQRLGLARALGSPAAVLLLDEPTAHLDARTEQHVLG 489
VL ELP G +T +G GG GLSLGQRQRL L R L + VL+LDEPTAHLD +E+ VL
Sbjct 467 VLAELPDGWNTRVGSGGTGLSLGQRQRLALTRVLATRRPVLVLDEPTAHLDDASERTVLD 526
Query 490 AIVERARAGATVLVVAHRQQVAAAGDRVVEVNSD 523
++ A AG TV+VV HR V AA DRV+ V++D
Sbjct 527 SLRHLAAAGRTVVVVGHRPAVLAAADRVIGVSAD 560
>gi|333918385|ref|YP_004491966.1| putative ABC transporter permease/ATP-binding protein CydD [Amycolicicoccus
subflavus DQS3-9A1]
gi|333480606|gb|AEF39166.1| Putative ABC transporter permease/ATP-binding protein CydD [Amycolicicoccus
subflavus DQS3-9A1]
Length=551
Score = 476 bits (1225), Expect = 5e-132, Method: Compositional matrix adjust.
Identities = 269/532 (51%), Positives = 347/532 (66%), Gaps = 11/532 (2%)
Query 1 VACGVGISGCAIGSAIVLASIVAGVI-DPAN--PGMAGLRRWLGPLSILLVLWGLRASIQ 57
V GV + I A+++A+I+AGV+ DPA P + W+ LS+L +RA+
Sbjct 23 VVMGVVTAATVIVMALMIATILAGVVTDPARRVPSV-----WIWELSVLAGAVLVRAAAM 77
Query 58 WLQARLAQRGASAVIADLSGQVLTAVTARRPSQLAAQRDAAAVLITR---GLDGLRPYFT 114
WL R A R ++AVI DL VL AV A P AA RD A ++T GLDGL PY T
Sbjct 78 WLHTRFAHRSSAAVIRDLKMDVLRAVAAMPPRDRAAVRDETATVVTHRNGGLDGLGPYLT 137
Query 115 GYLPTLLLAAILTPATVAVIGLYDLKSMAIVVITLPLIPIFMVLIGLATTNPSAAALAAM 174
GYLP L LAAI+ PA + VI ++D+ S I+ TLP+IP FM+LIGL T S A L +M
Sbjct 138 GYLPALALAAIVPPAVLVVIAVHDITSALIIFFTLPIIPTFMILIGLLTRGKSRAKLRSM 197
Query 175 TAVQARLLDLIAGIPTLRALGRASGPEQRIAELSADHRRSAMATLRIAFLSALVLELLAT 234
+ + A+LLDLIAG+PTLR+L R G QR+ EL HR + MA+LRIAFLS++VLE+ AT
Sbjct 198 SQLSAQLLDLIAGLPTLRSLARERGQTQRVRELGEQHRHTTMASLRIAFLSSMVLEMFAT 257
Query 235 LGVALVAVGIGLRLVFGEMSLTAGLTVLLLAPEVYWPLRRVGVQFHAAADGRTAADKAFA 294
L VALVAV +GLRLV+G M L GL L+LA EVY PLR VG QFHAA DG +AAD+AF+
Sbjct 258 LCVALVAVSVGLRLVYGNMELQPGLVALILAAEVYLPLRMVGAQFHAAEDGVSAADRAFS 317
Query 295 LLGESPSPTPGRRTVTARGGVIRLERLSVRGRDGRAPYDLTADIEPGRVTVLTGRNGAGK 354
LL + PG R + + + + L +R R+G AP +A+ PG ++V+TG NGAGK
Sbjct 318 LLAPRATTRPGSRQLPSGPYTVVVAGLRMRAREGFAPDGFSAEFRPGEISVITGPNGAGK 377
Query 355 STTLQAIAGLTAPSSGRITVAGVDVTNLAPAAWWRQLSWLPQRPVLVPGTVRHNLVLLGP 414
+T L A+ GL P G +TV+G V +L WW Q++W+PQ+PVL+PGTVR NL L GP
Sbjct 378 TTALHAVLGLVTPDGGAVTVSGFPVADLDIQQWWDQVAWVPQKPVLIPGTVRENLELNGP 437
Query 415 VDDLERACAAAGFDAVLDELPRGLDTVLGRGGVGLSLGQRQRLGLARALGSPAAVLLLDE 474
+DD+ RA GF VL ELP GL+T +G GG GLSLGQRQRL L RA S A VL++DE
Sbjct 438 IDDIARAAEQTGFGEVLAELPDGLETRIGIGGTGLSLGQRQRLALTRAFASDARVLIVDE 497
Query 475 PTAHLDARTEQHVLGAIVERARAGATVLVVAHRQQVAAAGDRVVEVNSDGFR 526
PTAHLD + +L A+ RA GATV+ VAH +V AA D+V + + R
Sbjct 498 PTAHLDDLSTDRILDAMRARAATGATVIAVAHHARVLAAADQVTTLGASAGR 549
>gi|111021820|ref|YP_704792.1| transport ATP-binding protein CydD [Rhodococcus jostii RHA1]
gi|110821350|gb|ABG96634.1| transport ATP-binding protein CydD [Rhodococcus jostii RHA1]
Length=570
Score = 472 bits (1215), Expect = 7e-131, Method: Compositional matrix adjust.
Identities = 282/530 (54%), Positives = 354/530 (67%), Gaps = 13/530 (2%)
Query 1 VACGVGISGCAIGSAIVLASIVAGVI--DPANPGMAGLRRWLGPLSILLVLWGLRASIQW 58
VA V I SA+++ ++ GVI D + G RW L++L +R W
Sbjct 45 VALSVVNVAMVIVSALMIGRVLGGVIVDDATDVG-----RWSTELAVLATAVAVRVLGTW 99
Query 59 LQARLAQRGASAVIADLSGQVLTAVTARRPSQLAAQRDAAAVLITRGLDGLRPYFTGYLP 118
LQ+R A R A+ V+A+L G+VL T RP +L +RD A ++TRG+DGL PY TGYLP
Sbjct 100 LQSRFAHRSATRVVAELKGEVLGVATRLRPRELDPRRDEIATVLTRGIDGLVPYLTGYLP 159
Query 119 TLLLAAILTPATVAVIGLYDLKSMAIVVITLPLIPIFMVLIGLATTNPSAAALAAMTAVQ 178
L+LAA LTPAT+AVI DL S AI+ +TLPLIPIFM+LIGL T +A L AMT +
Sbjct 160 ALVLAATLTPATLAVITFQDLTSAAIIFVTLPLIPIFMILIGLLTKGKAAKTLTAMTTLS 219
Query 179 ARLLDLIAGIPTLRALGRASGPEQRIAELSADHRRSAMATLRIAFLSALVLELLATLGVA 238
++LLDL+AG+PTLRALGR GP R+ EL HR + M+ LR+AFLS++VLELLATL VA
Sbjct 220 SQLLDLLAGLPTLRALGREQGPATRVRELGDAHRHTTMSALRVAFLSSMVLELLATLCVA 279
Query 239 LVAVGIGLRLVFGEMSLTAGLTVLLLAPEVYWPLRRVGVQFHAAADGRTAADKAFALLGE 298
LVAV IGLRLV+G M L AG+ L+LAPEVY PLR VG QFHAA DG AA +AFA++ +
Sbjct 280 LVAVSIGLRLVYGGMELEAGIVALILAPEVYLPLRMVGTQFHAAEDGMAAASRAFAVI-D 338
Query 299 SPSPTPGRRTVTARGGV-----IRLERLSVRGRDGRAPYDLTADIEPGRVTVLTGRNGAG 353
+ P A I + + V R G AP LT +EPG VTVLTG NG+G
Sbjct 339 TDRPDDAAAADGAVVVDAAGARIEFDGIDVPSRHGLAPRGLTGALEPGAVTVLTGPNGSG 398
Query 354 KSTTLQAIAGLTAPSSGRITVAGVDVTNLAPAAWWRQLSWLPQRPVLVPGTVRHNLVLLG 413
KST +QA+ GL P G + VAG V++L +AWW Q++WLPQ PVLVPGT+ NL L+G
Sbjct 399 KSTAVQALLGLVEPERGEVRVAGTPVSSLDRSAWWAQVAWLPQHPVLVPGTLDENLRLIG 458
Query 414 PVDDLERACAAAGFDAVLDELPRGLDTVLGRGGVGLSLGQRQRLGLARALGSPAAVLLLD 473
V DLE++CAA GFD VL ELP G +T +G GG GLSLGQRQRL L R L + VL+LD
Sbjct 459 EVVDLEQSCAATGFDEVLAELPDGWNTRVGSGGTGLSLGQRQRLALTRVLATRRPVLVLD 518
Query 474 EPTAHLDARTEQHVLGAIVERARAGATVLVVAHRQQVAAAGDRVVEVNSD 523
EPTAHLD +E+ VL ++ A AG TV+VV HR V AA DRV+EV++D
Sbjct 519 EPTAHLDDASERTVLDSLRSLAAAGRTVVVVGHRPTVLAAADRVIEVSAD 568
>gi|262200952|ref|YP_003272160.1| ABC transporter CydDC cysteine exporter (CydDC- E) family, permease/ATP-binding
protein CydD [Gordonia bronchialis DSM 43247]
gi|262084299|gb|ACY20267.1| ABC transporter, CydDC cysteine exporter (CydDC- E) family, permease/ATP-binding
protein CydD [Gordonia bronchialis DSM 43247]
Length=574
Score = 440 bits (1132), Expect = 2e-121, Method: Compositional matrix adjust.
Identities = 263/469 (57%), Positives = 313/469 (67%), Gaps = 8/469 (1%)
Query 60 QARLAQRGASAVIADLSGQVLTAVT---ARRPSQLAAQRDAAAVLITRGLDGLRPYFTGY 116
R A R A+ IA+L L VT P L +R+ AA ++ RGLD + PY +GY
Sbjct 96 HDRYAHRAAARSIAELRSAALATVTDPEHTSPRDLLGRREHAASVLLRGLDAVGPYLSGY 155
Query 117 LPTLLLAAILTPATVAVIGLYDLKSMAIVVITLPLIPIFMVLIGLATTNPSAAALAAMTA 176
LP L+++ I TP + VIGL DL S IVVITLPLIP+FMVL+GL T + LA M+
Sbjct 156 LPALIISVIATPVVIVVIGLADLPSALIVVITLPLIPVFMVLVGLMTREKTERKLATMSR 215
Query 177 VQARLLDLIAGIPTLRALGRASGPEQRIAELSADHRRSAMATLRIAFLSALVLELLATLG 236
+ ++LLDLIAG+PTLRALGRA P ++AEL A HRRS M++LR+AFLS VLELLATL
Sbjct 216 LTSQLLDLIAGLPTLRALGRAQAPAAQVAELGARHRRSTMSSLRVAFLSGAVLELLATLC 275
Query 237 VALVAVGIGLRLVFGEMSLTAGLTVLLLAPEVYWPLRRVGVQFHAAADGRTAADKAFALL 296
VALVAVGIGLRLV+GEMSL AGL L+LAPE Y PLRRVG QFH + DG TAA + F L+
Sbjct 276 VALVAVGIGLRLVYGEMSLYAGLFALILAPEAYHPLRRVGTQFHNSTDGVTAAREVFDLI 335
Query 297 ---GESPSPTPGRRTVTARGGVIRLERLSVRGRDGRAPYDLTADIEPGRVTVLTGRNGAG 353
PS RT G IRL + V GRDG APY L A + G VTV TG NG+G
Sbjct 336 QAPDRHPSTATPIRTTGVAGQPIRLLDVGVHGRDGWAPYHLDATVPAGAVTVFTGPNGSG 395
Query 354 KSTTLQAIAGLTAPSSGRITVAGVDVTNLAPAAWWRQLSWLPQRPVLVPGTVRHNLVLLG 413
KST L AI GL AP G + + V V L P A+ Q++WLPQ+PV+VPGTV NL L G
Sbjct 396 KSTALAAIMGLLAPDDGSVLIGSVPVVELEPDAFHEQIAWLPQQPVIVPGTVADNLELFG 455
Query 414 PVD--DLERACAAAGFDAVLDELPRGLDTVLGRGGVGLSLGQRQRLGLARALGSPAAVLL 471
++ L RA AA GFD VL LP GLDT LG GGVGLS GQRQRL L R L SP+ +LL
Sbjct 456 ALNRVGLARAAAATGFDEVLAALPDGLDTTLGAGGVGLSAGQRQRLALTRVLASPSPLLL 515
Query 472 LDEPTAHLDARTEQHVLGAIVERARAGATVLVVAHRQQVAAAGDRVVEV 520
LDEPTAHLDA +E VL + +RARAG TVL+VAHR D +V+V
Sbjct 516 LDEPTAHLDAASEVAVLTGLRDRARAGDTVLIVAHRDIAREFADHLVDV 564
>gi|227495875|ref|ZP_03926186.1| ABC superfamily ATP binding cassette transporter CydD protein
[Actinomyces urogenitalis DSM 15434]
gi|226834552|gb|EEH66935.1| ABC superfamily ATP binding cassette transporter CydD protein
[Actinomyces urogenitalis DSM 15434]
Length=582
Score = 410 bits (1053), Expect = 4e-112, Method: Compositional matrix adjust.
Identities = 248/540 (46%), Positives = 331/540 (62%), Gaps = 30/540 (5%)
Query 7 ISGCAIGSAIV-LASIVAGVIDPANPGMAGLRRWLGPLSILLVLWGLRASIQWLQARLAQ 65
++G A +V A +++ VI P G + + + L + +L V+ LRA + +Q A
Sbjct 16 VTGLATAVLVVAQAFLISRVISPVITGESTVSQVLPLVGVLAVVVILRAFVLLIQEARAH 75
Query 66 RGASAVIADLSGQVLTAVTARRPSQLAAQRDAAAVLITRGLDGLRPYFTGYLPTLLLAAI 125
R A+ I +L V+ A P AA L+TRG+D L PYFT YLP LL+AA
Sbjct 76 RAATGTIIELRRLVIERAAALGPRWQAAHGAETTTLLTRGMDDLEPYFTRYLPQLLMAAT 135
Query 126 LTPATVAVIGLYDLKSMAIVVITLPLIPIFMVLIGLATTNPSAAALAAMTAVQARLLDLI 185
+TP T V+ L D+ S VV+T+PLIPIFM+LIG T SA L AM + A++LDLI
Sbjct 136 VTPLTGLVMLLQDVPSTIAVVLTIPLIPIFMILIGKMTQQHSADRLEAMERLGAQVLDLI 195
Query 186 AGIPTLRALGRASGPEQRIAELSADHRRSAMATLRIAFLSALVLELLATLGVALVAVGIG 245
AG+PTL+ALGR GP +R+ EL + R+ MATLR+AFLS VLE L TL VA++AV +G
Sbjct 196 AGLPTLKALGREIGPGRRVRELGRAYNRTTMATLRVAFLSGAVLEFLTTLSVAIIAVEVG 255
Query 246 LRLVFGEMSLTAGLTVLLLAPEVYWPLRRVGVQFHAAADGRTAADKAFALLGESPSPTPG 305
RL+FG M L GL V+++APEVY PLR+VG QFHA+A+G AA F +L E+P+ + G
Sbjct 256 FRLLFGHMDLATGLLVIMIAPEVYQPLRQVGFQFHASANGVAAAQAVFEVL-EAPALSSG 314
Query 306 RRTVTA---RGGVIRLERLSVRGRDGRAPYDLTADIEPGRVTVLTGRNGAGKSTTLQAIA 362
T+ A I LE LSV R AP+DL+A I PGR+T L+G +GAGK+TT +
Sbjct 315 --TLPAPRLEDASIELEHLSVAARGAWAPHDLSATIRPGRLTALSGPSGAGKTTTSEVFL 372
Query 363 GLTAPSSGRITV-----AGVDVTNLAPAAWWRQLSWLPQRPVLVPGTVRHNLVLLGPVDD 417
L P GR+ V A D+ P +WWRQ+SW+PQRPVL+PGT+R NL+ P DD
Sbjct 373 RLLEPEQGRVRVISADGAAQDLAETEPTSWWRQISWVPQRPVLLPGTIRSNLM---PTDD 429
Query 418 LE---------------RACAAAGFDAVLDELPRGLDTVLGRGGVGLSLGQRQRLGLARA 462
+ A G + V+D LP+G DT +G G GLS+GQRQRL L RA
Sbjct 430 VSSPDHGAHAPVPARVLEATRVTGLNEVIDSLPQGWDTPVGHAGTGLSVGQRQRLALTRA 489
Query 463 LGSPAAVLLLDEPTAHLDARTEQHVLGAIVERARAGATVLVVAHRQQVAAAGDRVVEVNS 522
L S A ++++DEPTAHLDA +E HVL + +G TV+V+AHR V A D V+ V+S
Sbjct 490 LVSTAPLVVMDEPTAHLDAASEAHVLDGLAALRASGRTVVVIAHRSSVLALADDVITVSS 549
>gi|343925906|ref|ZP_08765421.1| ABC transporter permease/ATP-binding protein CydD [Gordonia alkanivorans
NBRC 16433]
gi|343764257|dbj|GAA12347.1| ABC transporter permease/ATP-binding protein CydD [Gordonia alkanivorans
NBRC 16433]
Length=574
Score = 406 bits (1043), Expect = 6e-111, Method: Compositional matrix adjust.
Identities = 259/469 (56%), Positives = 315/469 (68%), Gaps = 9/469 (1%)
Query 62 RLAQRGASAVIADLSGQVLTAVTARR---PSQLAAQRDAAAVLITRGLDGLRPYFTGYLP 118
R A R A IA+L + L +T R P L R+ AA ++ RGLD L PY +GYLP
Sbjct 97 RYAHRAAEQAIAELRSEALDVLTDPRRTAPRTLLTLREHAATVLLRGLDALGPYLSGYLP 156
Query 119 TLLLAAILTPATVAVIGLYDLKSMAIVVITLPLIPIFMVLIGLATTNPSAAALAAMTAVQ 178
L+ A ILTP VI D S I++ITLPLIPIFMVL+GL T + ++ LA M+ +
Sbjct 157 ALVAAVILTPTVTVVIAFADWPSALIILITLPLIPIFMVLVGLMTRDRTSRKLATMSRLT 216
Query 179 ARLLDLIAGIPTLRALGRASGPEQRIAELSADHRRSAMATLRIAFLSALVLELLATLGVA 238
A+LLDLIAG+PTLRAL RA P ++AEL HRRS M++LR+AFLS VLELLATL VA
Sbjct 217 AQLLDLIAGLPTLRALNRAEAPAAQVAELGEAHRRSTMSSLRVAFLSGAVLELLATLCVA 276
Query 239 LVAVGIGLRLVFGEMSLTAGLTVLLLAPEVYWPLRRVGVQFHAAADGRTAADKAFALLGE 298
LVAVGIGLRLVFGEMSL AG+ L+LAPE Y PLRRVG QFH +ADG TAA + F L+
Sbjct 277 LVAVGIGLRLVFGEMSLYAGVFALILAPEAYLPLRRVGAQFHNSADGVTAAGEVFELIDS 336
Query 299 ----SPSPTPGRRTVTARGGVIRLERLSVRGRDGRAPYDLTADIEPGRVTVLTGRNGAGK 354
+P P G R +T G I + L V GRDG AP L A I PG +T+ TG NG+GK
Sbjct 337 PEDAAPMPVSGGRGITVAGAPITILDLGVHGRDGWAPESLRATIAPGSLTLFTGPNGSGK 396
Query 355 STTLQAIAGLTAPSSGRITVAGVDVTNLAPAAWWRQLSWLPQRPVLVPGTVRHNLVLLG- 413
STTL AI GL P G + + + VT+ P + + Q++WLPQ+PV+VPGTV N+ L G
Sbjct 397 STTLAAIMGLVTPDDGSVLIGSIPVTHADPESLYEQIAWLPQQPVVVPGTVGENVELFGA 456
Query 414 -PVDDLERACAAAGFDAVLDELPRGLDTVLGRGGVGLSLGQRQRLGLARALGSPAAVLLL 472
D +RA A+GFD+V+ ELP LDT LG GGVGLS GQRQRL L R L SPA +LLL
Sbjct 457 LDRDAADRAATASGFDSVVLELPNRLDTRLGAGGVGLSAGQRQRLALTRVLASPAPLLLL 516
Query 473 DEPTAHLDARTEQHVLGAIVERARAGATVLVVAHRQQVAAAGDRVVEVN 521
DEPTAHLD +E+ VL A+ ERARAG TV+VVAHR D+VVE +
Sbjct 517 DEPTAHLDEDSERAVLTALRERARAGDTVIVVAHRGIAREFADQVVEFD 565
>gi|54022554|ref|YP_116796.1| putative ABC transporter ATP-binding protein [Nocardia farcinica
IFM 10152]
gi|54014062|dbj|BAD55432.1| putative ABC transporter ATP-binding protein [Nocardia farcinica
IFM 10152]
Length=611
Score = 401 bits (1030), Expect = 2e-109, Method: Compositional matrix adjust.
Identities = 295/566 (53%), Positives = 347/566 (62%), Gaps = 55/566 (9%)
Query 10 CAIGSAIVLASIVAGVIDPANPGMAGLRRWLGPLSILLVLWGLRASIQWLQARLAQRGAS 69
C + +A L ++AGVI +P + W L +L + RA W QAR+A R +
Sbjct 34 CIVVAATALGRVLAGVI--TDPTRRRITDWTAELVVLALALAGRAVASWWQARIAHRAGA 91
Query 70 AVIADLSGQVLTAVTARRPSQLAAQRDAAAVLITRGLDGLRPYFTGYLPTLLLAAILTPA 129
+V+A+L VL A A P +L +R AV++ GL GLR Y TGYLP LLLA ++ P
Sbjct 92 SVVAELETAVLAAGAALPPRELDRRRTELAVVVGTGLSGLRAYLTGYLPALLLAVLVPPV 151
Query 130 TVAVIGLYDLKSMAIVVITLPLIPIFMVLIGLATTNPSAAALAAMTAVQARLLDLIAGIP 189
+AVI +D S I V+TLPLIPIFMVLIGL T +AA LAA T + +LLDL AG+P
Sbjct 152 VLAVILAHDPVSAGIAVVTLPLIPIFMVLIGLLTQGRAAATLAATTRLSDQLLDLFAGMP 211
Query 190 TLRALGRAS---GP-----EQRIAELSADHRRSAMATLRIAFLSALVLELLATLGVALVA 241
TLRALGR GP E R+ L R M LRIAFLS++VLELLATL VAL+A
Sbjct 212 TLRALGREHADGGPAARTMEHRVRALGDALRVRTMRALRIAFLSSMVLELLATLSVALIA 271
Query 242 VGIGLRLVFGEMSLTAGLTVLLLAPEVYWPLRRVGVQFHAAADGRTAADKAFALL----- 296
V IGLRLV+G M L GL L+LAPEVY PLR VG +FHAA DG AADKAFA+L
Sbjct 272 VSIGLRLVYGGMDLYDGLVALILAPEVYLPLRMVGERFHAAQDGMAAADKAFAVLEPEGV 331
Query 297 -----------GESPSPTPGRR-------------------TVTARGG---------VIR 317
G + P R V RGG ++
Sbjct 332 RRGRIDDRTRVGATDRPAVDERGGLAVGGRGGPALDGRGDLAVDERGGPAVDGRGPALVE 391
Query 318 LERLSVRGRDGRAPYDLTADIEPGRVTVLTGRNGAGKSTTLQAIAGLTAPSSGRITVAGV 377
L L VR RDG AP DL A I PG +TVL G NG+GKST L AI GL +GR+ V G+
Sbjct 392 LAGLGVRARDGWAPADLCAVIRPGALTVLAGPNGSGKSTALAAILGLVDADAGRVRVDGI 451
Query 378 DVTNLAPAAWWRQLSWLPQRPVLVPGTVRHNLVLLG-PVDDLERACAAAGFDAVLDELPR 436
DV L P AWWR+L+WLPQRPVLVPGT+R NL LLG + DL RACAA GFDAVLDELP
Sbjct 452 DVRELDPDAWWRRLAWLPQRPVLVPGTLRENLELLGADLVDLNRACAATGFDAVLDELPH 511
Query 437 GLDTVLGRGGVGLSLGQRQRLGLARALGSPAAVLLLDEPTAHLDARTEQHVLGAIVERAR 496
DTV+G GGVGLSLGQRQRL L R L + VLLLDEPTAHLD +E VL A+ ERA
Sbjct 512 RWDTVVGVGGVGLSLGQRQRLALTRVLAADRPVLLLDEPTAHLDEASEAGVLAALRERAA 571
Query 497 AGATVLVVAHRQQVAAAGDRVVEVNS 522
AGATVLVV HR V AA D+V+EV S
Sbjct 572 AGATVLVVGHRPTVLAAADQVIEVRS 597
>gi|326384531|ref|ZP_08206210.1| ABC transporter CydDC cysteine exporter (CydDC- E) family, permease/ATP-binding
protein CydD [Gordonia neofelifaecis NRRL
B-59395]
gi|326196665|gb|EGD53860.1| ABC transporter CydDC cysteine exporter (CydDC- E) family, permease/ATP-binding
protein CydD [Gordonia neofelifaecis NRRL
B-59395]
Length=566
Score = 396 bits (1017), Expect = 6e-108, Method: Compositional matrix adjust.
Identities = 259/516 (51%), Positives = 328/516 (64%), Gaps = 21/516 (4%)
Query 25 VIDPANPGMAGLRRWLGP----LSILLVLWGLRASIQWLQARLAQRGASAVIADLSGQVL 80
++DPA RR G L++L V RA++ + R+A+R A A I +L L
Sbjct 58 IVDPA-------RRNFGDQAVHLTVLAVALTARAAMTYFGDRVARRSAHATIDELRVAAL 110
Query 81 TAVT---ARRPSQLAAQRDAAAVLITRGLDGLRPYFTGYLPTLLLAAILTPATVAVIGLY 137
+T P +L A+R++A + RGLD L Y +GYLP LL A++TP V V
Sbjct 111 DRLTDPAHTSPRRLLAERESALTVTLRGLDRLSDYLSGYLPALLATAVITPIIVVVELWT 170
Query 138 DLKSMAIVVITLPLIPIFMVLIGLATTNPSAAALAAMTAVQARLLDLIAGIPTLRALGRA 197
D S I+++TLPLIPIFMVLIGL T + + L AM+ A+L+DL+ G+PTLRALGRA
Sbjct 171 DWISGVIIIVTLPLIPIFMVLIGLVTRDRTRRKLEAMSRQNAQLVDLMTGLPTLRALGRA 230
Query 198 SGPEQRIAELSADHRRSAMATLRIAFLSALVLELLATLGVALVAVGIGLRLVFGEMSLTA 257
GP ++AEL RRS M +LRIAFLS VLELLATL VALVAV IGLRLVFGEMSL A
Sbjct 231 QGPAGQVAELGERLRRSTMGSLRIAFLSGAVLELLATLSVALVAVSIGLRLVFGEMSLYA 290
Query 258 GLTVLLLAPEVYWPLRRVGVQFHAAADGRTAADKAFALLGESPSPTPGRRT---VTARGG 314
G+ L+LAPE Y PLR++G QFH A DG A+D L+ + G V RG
Sbjct 291 GVLALVLAPEAYLPLRQIGAQFHNAEDGVAASDDVLDLIDSDRDDSRGTADAAPVVVRGV 350
Query 315 VIRLERLSVRGRDGRAPYDLTADIEPGRVTVLTGRNGAGKSTTLQAIAGLTAPSSGRITV 374
+ L+ L VRGRDG AP L+A I PG +TV+ G NGAGKST A+ GL +P GR+ +
Sbjct 351 PVELDGLGVRGRDGWAPRGLSATIRPGELTVVRGPNGAGKSTIFAALLGLQSPDEGRVLI 410
Query 375 AGVDVTNLAPAAWWRQLSWLPQRPVLVPGTVRHNLVLLGPVDD--LERACAAAGFDAVLD 432
G D+T + + RQ++WLPQ P +VPGTV N+ L G + ++ A AA F+ VL
Sbjct 411 GGRDITTVDLDDYHRQVAWLPQHPAIVPGTVAENIELFGGRESAAVDEAMRAAAFEEVLA 470
Query 433 ELPRGLDTVLGRGGVGLSLGQRQRLGLARALGSPAAVLLLDEPTAHLDARTEQHVLGAIV 492
ELP GLDT+LG GG GLS GQRQRL LAR L SPA +LLLDEPTAHLD T VL A++
Sbjct 471 ELPDGLDTMLGSGGAGLSAGQRQRLALARTLASPAPLLLLDEPTAHLDDVTADRVLDALI 530
Query 493 ERARAGATVLVVAHRQQVAAAGDRVVEV--NSDGFR 526
RAR+GA V+VV+HR V A D VV+V ++G R
Sbjct 531 GRARSGAAVVVVSHRAAVVDAADHVVDVVKEAEGVR 566
>gi|269794459|ref|YP_003313914.1| cysteine ABC transporter permease subunit/ATP-binding protein
CydD [Sanguibacter keddieii DSM 10542]
gi|269096644|gb|ACZ21080.1| cysteine export CydDC family ABC transporter permease subunit/ATP-binding
protein CydD [Sanguibacter keddieii DSM 10542]
Length=575
Score = 392 bits (1008), Expect = 5e-107, Method: Compositional matrix adjust.
Identities = 255/554 (47%), Positives = 330/554 (60%), Gaps = 45/554 (8%)
Query 2 ACGVGISGCAIGSAIVLASIVAGVIDPANP--GMAGLRRWLGPLSILLVLWGLRASIQWL 59
A G+ +G I A+++A+++A V+ +AG RWL + + A + L
Sbjct 24 AFGIVTAGLVIAQALLIAAVLAPVVSSGATLGDVAGHLRWLAAVVVAR------AVVNGL 77
Query 60 QARLAQRGASAVIADLSGQVLTAVTARRPSQLAAQRDAAAV-LITRGLDGLRPYFTGYLP 118
Q R A R A+ V+ L GQVL P LA + V L TRGLD L PY YLP
Sbjct 78 QERYAHRAATRVVTSLRGQVLEHAAGLGPRWLATGQGVDVVTLATRGLDDLEPYLVRYLP 137
Query 119 TLLLAAILTPATVAVIGLYDLKSMAIVVITLPLIPIFMVLIGLATTNPSAAALAAMTAVQ 178
LLLA +TPAT+ V+ D S IVV+T+PL+P+FM+L+G T S LA M +
Sbjct 138 QLLLAVTVTPATLVVVFGLDWISAVIVVVTIPLVPVFMILVGQLTQAYSERRLAVMQRLG 197
Query 179 ARLLDLIAGIPTLRALGRASGPEQRIAELSADHRRSAMATLRIAFLSALVLELLATLGVA 238
+++LDL+AG+PTLRA GR GP R+ +L + RS M TLR+AFLS +VLELL TL VA
Sbjct 198 SQVLDLLAGLPTLRAFGRERGPVARVRQLGEAYTRSTMKTLRVAFLSGMVLELLTTLSVA 257
Query 239 LVAVGIGLRLVFGEMSLTAGLTVLLLAPEVYWPLRRVGVQFHAAADGRTAADKAFALLGE 298
LVAVG+GLRLV+G++ L + VL+LAPEVY P+R++GVQFHA+ DG TAA KAFA++ E
Sbjct 258 LVAVGVGLRLVYGQVDLEVAIAVLVLAPEVYLPIRQIGVQFHASTDGITAAQKAFAVIEE 317
Query 299 S-------PSPTPGRRTVTARG-GVIRLERLSVRGRDGRAPYDLTADIEPGRVTVLTGRN 350
+P R TVT G GV+ GRD AP LTA I PGR+ LTG +
Sbjct 318 PLRPRGTVAAPDLARSTVTLSGVGVV------APGRDVSAPSGLTASIAPGRIVALTGPS 371
Query 351 GAGKSTTLQAIAGLTAPSSGRITVAGVDVTNLAPAAWWRQLSWLPQRPVLVPGTVRHNL- 409
G+GK+TT+ A+ GL +P +G + V G D+ + WWRQ++WLPQR L PG++R L
Sbjct 372 GSGKTTTVLALLGLVSPDAGTVQVDGTDLATVDLETWWRQIAWLPQRSALPPGSIRATLD 431
Query 410 -------VLLGP------VDDLERACAA--------AGFDAVLDELPRGLDTVLGRGGVG 448
GP DD AA G DAV+ LP GLDTVLG+GGVG
Sbjct 432 AARRSGAEHQGPRGDTFDPDDTAAGTAAATARAMRLTGLDAVVAALPDGLDTVLGQGGVG 491
Query 449 LSLGQRQRLGLARALGSPAAVLLLDEPTAHLDARTEQHVLGAIVERARAGATVLVVAHRQ 508
LS+GQRQR+ L AL +++LDEPTAHLDA E VL ++ AG TVLVVAHR
Sbjct 492 LSVGQRQRVALTAALLGDEPLVVLDEPTAHLDALAEDQVLASLAALREAGRTVLVVAHRP 551
Query 509 QVAAAGDRVVEVNS 522
+ A D VVEV S
Sbjct 552 SLVALADDVVEVTS 565
>gi|329947030|ref|ZP_08294442.1| thiol reductant ABC exporter, CydD subunit [Actinomyces sp. oral
taxon 170 str. F0386]
gi|328526841|gb|EGF53854.1| thiol reductant ABC exporter, CydD subunit [Actinomyces sp. oral
taxon 170 str. F0386]
Length=579
Score = 384 bits (985), Expect = 3e-104, Method: Compositional matrix adjust.
Identities = 227/489 (47%), Positives = 298/489 (61%), Gaps = 28/489 (5%)
Query 60 QARLAQRGASAVIADLSGQVLTAVTARRPSQLAAQRDAAAVLITRGLDGLRPYFTGYLPT 119
Q A R A+ I +L VL P A A L+TRGLD L PYFT YLP
Sbjct 70 QEVHAHRSATGTIVELRRLVLEHAARLGPRWQALHGAGTATLLTRGLDDLEPYFTRYLPQ 129
Query 120 LLLAAILTPATVAVIGLYDLKSMAIVVITLPLIPIFMVLIGLATTNPSAAALAAMTAVQA 179
L+LAA +TPATV V+ D + V+ TLPLIPIFM+LIG T + S L AM +
Sbjct 130 LVLAATVTPATVLVLITQDWPAAVAVMCTLPLIPIFMILIGRMTQSVSQERLKAMQVLGD 189
Query 180 RLLDLIAGIPTLRALGRASGPEQRIAELSADHRRSAMATLRIAFLSALVLELLATLGVAL 239
++LDLIAG+PTL+ALGR GP +R+ L +RR+ M+TLR AFLS VLE + TL VA+
Sbjct 190 QVLDLIAGLPTLKALGREQGPAERVRALGRAYRRTTMSTLRFAFLSGAVLEFITTLSVAI 249
Query 240 VAVGIGLRLVFGEMSLTAGLTVLLLAPEVYWPLRRVGVQFHAAADGRTAADKAFALL--- 296
+AV +G RLV G M L GL VL++AP+VY PLR+VG QFHA+A+G AA+ F +L
Sbjct 250 IAVEVGFRLVAGRMDLFTGLLVLMVAPDVYQPLRQVGFQFHASANGVAAAESVFEVLQTP 309
Query 297 --GESPSPTPGRRTVTARGGVIRLERLSVRGRDGRAPYDLTADIEPGRVTVLTGRNGAGK 354
+ P P P RT T I L+ +SV R AP L+A I PG + LTG +GAGK
Sbjct 310 VPEQGPLPAPDLRTAT-----IELDAVSVAARGAWAPAGLSATIRPGSLVALTGPSGAGK 364
Query 355 STTLQAIAGLTAPSSGRITV----------AGVDVTNLAPAAWWRQLSWLPQRPVLVPGT 404
+TT Q + GL GR+ + VD++ + PA WW Q++W+PQRP + PGT
Sbjct 365 TTTTQVLLGLLPADRGRVRIVPDCDEDRRDGAVDLSEIDPATWWEQIAWVPQRPTITPGT 424
Query 405 VRHNL--------VLLGPVDDLERACAAAGFDAVLDELPRGLDTVLGRGGVGLSLGQRQR 456
V N+ V G D+L +A A GFD V+ +LP+G DT++G GGVGLS+GQRQR
Sbjct 425 VLSNVLDDAPGDSVAGGAPDELVKAARATGFDEVVADLPQGWDTLVGTGGVGLSVGQRQR 484
Query 457 LGLARALGSPAAVLLLDEPTAHLDARTEQHVLGAIVERARAGATVLVVAHRQQVAAAGDR 516
L L RAL S A ++++DEPTAHLDA +E HVL + +G TV+V+AHR + A ++
Sbjct 485 LALTRALCSTAPLVIMDEPTAHLDAVSEGHVLTGVRALHASGRTVVVIAHRPALIALAEQ 544
Query 517 VVEVNSDGF 525
V V S+
Sbjct 545 TVAVTSESI 553
>gi|340360337|ref|ZP_08682807.1| cysteine/glutathione ABC superfamily ATP binding cassette transporter,
ABC/membrane protein [Actinomyces sp. oral taxon 448
str. F0400]
gi|339883538|gb|EGQ73381.1| cysteine/glutathione ABC superfamily ATP binding cassette transporter,
ABC/membrane protein [Actinomyces sp. oral taxon 448
str. F0400]
Length=589
Score = 372 bits (956), Expect = 7e-101, Method: Compositional matrix adjust.
Identities = 226/489 (47%), Positives = 292/489 (60%), Gaps = 33/489 (6%)
Query 58 WLQARLAQRGASAVIADLSGQVLTAVTARRPSQLAAQRDAAAVLITRGLDGLRPYFTGYL 117
+ Q LA R AS I +L QVL P LA A L+TRGLD L PYFT YL
Sbjct 77 YAQEALAHRAASRTIIELRRQVLEHAATLGPRWLAGHGSDTATLLTRGLDDLEPYFTRYL 136
Query 118 PTLLLAAILTPATVAVIGLYDLKSMAIVVITLPLIPIFMVLIGLATTNPSAAALAAMTAV 177
P LLLAA +TP T V+ + D+ S IV T+PL+PIFM+LIG T SA L AM +
Sbjct 137 PQLLLAATVTPLTCLVMLVQDVPSAIIVACTVPLVPIFMILIGRLTQRRSADRLLAMERL 196
Query 178 QARLLDLIAGIPTLRALGRASGPEQRIAELSADHRRSAMATLRIAFLSALVLELLATLGV 237
++LDL+AG+PTL+ALGR +GP R+ +L + + M TLR+AFLS VLE + TL V
Sbjct 197 GGQVLDLLAGLPTLKALGREAGPAARVRQLGRAYSATTMRTLRVAFLSGAVLEFITTLSV 256
Query 238 ALVAVGIGLRLVFGEMSLTAGLTVLLLAPEVYWPLRRVGVQFHAAADGRTAADKAFALLG 297
A++AV +G RL+F M LT L VL++APEVY PLR+VG FHA+A+G AA+ F +LG
Sbjct 257 AIIAVQVGFRLLFDRMDLTTALLVLMIAPEVYQPLRQVGFHFHASANGIAAANAVFEVLG 316
Query 298 ES-------PSPTPGRRTVTARGGVIRLERLSVRGRDGRAPYDLTADIEPGRVTVLTGRN 350
S P+P R VI +E LSV R AP L+A I PGR+TVLTG +
Sbjct 317 TSAPEHGTAPAPDLAR-------AVIEIEDLSVAARGAWAPSGLSATIRPGRLTVLTGPS 369
Query 351 GAGKSTTLQAIAGLTAPSSGRITV----AGVDVTNLAPAAWWRQLSWLPQRPVLVPGTVR 406
GAGK+T Q + L G + V D+ ++ PA WW Q++W+PQRP++VPGTV
Sbjct 370 GAGKTTATQVLLSLLDVDRGGVRVRTGGTATDLRDIDPATWWAQITWVPQRPIIVPGTVL 429
Query 407 HNLVLLGP-------------VDDLERACAAAGFDAVLDELPRGLDTVLGRGGVGLSLGQ 453
N +LGP + L A GFD V+ LP G T +G+GG+GLS+GQ
Sbjct 430 TN--VLGPEHTAGIDARQARDLPPLAEAARTTGFDEVVSALPLGWSTPVGQGGLGLSVGQ 487
Query 454 RQRLGLARALGSPAAVLLLDEPTAHLDARTEQHVLGAIVERARAGATVLVVAHRQQVAAA 513
RQRL L RAL A +++LDEPTAHLDA +E HVL + TV+ +AHR + A
Sbjct 488 RQRLALTRALIRDAPLVVLDEPTAHLDATSEAHVLNGVEALRSDHHTVVAIAHRAALVAM 547
Query 514 GDRVVEVNS 522
D V+EV S
Sbjct 548 ADDVIEVAS 556
>gi|326773631|ref|ZP_08232914.1| ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding
protein CydD [Actinomyces viscosus C505]
gi|326636861|gb|EGE37764.1| ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding
protein CydD [Actinomyces viscosus C505]
Length=591
Score = 370 bits (950), Expect = 3e-100, Method: Compositional matrix adjust.
Identities = 227/489 (47%), Positives = 296/489 (61%), Gaps = 19/489 (3%)
Query 53 RASIQWLQARLAQRGASAVIADLSGQVLTAVTARRPSQLAAQRDAAAVLITRGLDGLRPY 112
RA + LQ A R A+ I +L VL P A A L+TR LD L PY
Sbjct 71 RALVVLLQEVHAHRSATETIVELRRLVLEHAAQLGPRWQALHGTQTATLLTRALDDLEPY 130
Query 113 FTGYLPTLLLAAILTPATVAVIGLYDLKSMAIVVITLPLIPIFMVLIGLATTNPSAAALA 172
FT YLP LLLA+ +TPATV V+ D + VV TLPLIPIFM+LIG T + S L
Sbjct 131 FTRYLPQLLLASTVTPATVLVLLTQDWSAAVAVVCTLPLIPIFMILIGRMTQSVSQERLK 190
Query 173 AMTAVQARLLDLIAGIPTLRALGRASGPEQRIAELSADHRRSAMATLRIAFLSALVLELL 232
M + ++LDLI+G+PTL+ALGR GP +++ LS +RR+ M+TLR+AFLS VLE +
Sbjct 191 TMQVLGDQVLDLISGLPTLKALGRERGPVEQVRSLSRSYRRTTMSTLRVAFLSGAVLEFI 250
Query 233 ATLGVALVAVGIGLRLVFGEMSLTAGLTVLLLAPEVYWPLRRVGVQFHAAADGRTAADKA 292
TL VA++AV IG RLV G M L GL VL++APEVY PLR+VG QFHA+A+G AA+
Sbjct 251 TTLSVAIIAVQIGFRLVAGRMDLFTGLLVLMVAPEVYQPLRQVGFQFHASANGVAAANAV 310
Query 293 FALLGESPSPTPGRRTVTA-RGGVIRLERLSVRGRDGRAPYDLTADIEPGRVTVLTGRNG 351
F +L ++P P G R I L+ +SV R AP L+A I PG + LTG +G
Sbjct 311 FEVL-QTPVPEHGDLPAPDLRSSTIELDEVSVASRGAWAPAGLSASIRPGSLVALTGPSG 369
Query 352 AGKSTTLQAIAGLTAPSSGRITVAG--------VDVTNLAPAAWWRQLSWLPQRPVLVPG 403
AGK+TT Q + GL P GR+ + VD+ + PA WW Q++W+PQRP + PG
Sbjct 370 AGKTTTTQVLLGLLPPGRGRVRIVPDGGAPSGVVDLAQIDPATWWEQIAWVPQRPTITPG 429
Query 404 TVRHNLV---------LLGPVDDLERACAAAGFDAVLDELPRGLDTVLGRGGVGLSLGQR 454
TV N++ G D L A A GFD V+D LP+G T +G GVGLS+GQR
Sbjct 430 TVLDNVLDHAEPGASTAEGVPDVLVEAARATGFDEVVDGLPQGWQTPVGSAGVGLSVGQR 489
Query 455 QRLGLARALGSPAAVLLLDEPTAHLDARTEQHVLGAIVERARAGATVLVVAHRQQVAAAG 514
QRL L RAL S A ++++DEPTAHLDA +E HVL A+ +G TV+V+AHR + A
Sbjct 490 QRLALTRALCSTAPLVVMDEPTAHLDAASEAHVLDAVRALHASGRTVVVIAHRPALMALA 549
Query 515 DRVVEVNSD 523
++ + V S
Sbjct 550 EQTIAVTSQ 558
>gi|269218647|ref|ZP_06162501.1| ABC transporter, CydDC cysteine exporter family, permease/ATP-binding
protein CydD [Actinomyces sp. oral taxon 848 str. F0332]
gi|269211758|gb|EEZ78098.1| ABC transporter, CydDC cysteine exporter family, permease/ATP-binding
protein CydD [Actinomyces sp. oral taxon 848 str. F0332]
Length=565
Score = 370 bits (950), Expect = 3e-100, Method: Compositional matrix adjust.
Identities = 222/496 (45%), Positives = 299/496 (61%), Gaps = 20/496 (4%)
Query 42 PLSILLVLWGLRASIQWLQARLAQRGASAVIADLSGQVLTAVTARRPSQLAAQRDAAAV- 100
PL ++ + RA + + Q R A IA L G+VL + R LA + ++ V
Sbjct 42 PLGLVAGAFAGRALVGYAQEAAGHRAALRTIAQLRGRVLDSAADRGQRWLADGKTSSTVT 101
Query 101 LITRGLDGLRPYFTGYLPTLLLAAILTPATVAVIGLYDLKSMAIVVITLPLIPIFMVLIG 160
L T GLD L PYF +LP L+L + TPAT+A + D S +++ LPLIPIFMVL+G
Sbjct 102 LATEGLDALEPYFVRFLPQLILTCLATPATLAAVVWLDWISAVAILVCLPLIPIFMVLVG 161
Query 161 LATTNPSAAALAAMTAVQARLLDLIAGIPTLRALGRASGPEQRIAELSADHRRSAMATLR 220
T S L AM + ++LLDL+AG+ TL+ LGR S P +R+ +L + R+ M TL
Sbjct 162 KMTQAYSNERLRAMQRLGSQLLDLLAGLSTLKGLGRESAPRKRVKDLGDSYARTTMKTLY 221
Query 221 IAFLSALVLELLATLGVALVAVGIGLRLVFGEMSLTAGLTVLLLAPEVYWPLRRVGVQFH 280
+AFLS VLE LAT+ ALVAV +GLR+V G++ L +GL +++L PE + PLR VG QFH
Sbjct 222 VAFLSGAVLEFLATVSTALVAVEVGLRMVGGDLDLFSGLAIIMLTPECFKPLREVGAQFH 281
Query 281 AAADGRTAADKAFALLGESPSPTPGRRTVTARGGV-------------IRLERLSVR--G 325
A+ADG AA+ AF +L E+ T R A G + +RLSV G
Sbjct 282 ASADGVAAAESAFDML-ENEGETEASRKAEAPGKAASNLPCPDLAVSPVVFDRLSVASPG 340
Query 326 RDGRAPYDLTADIEPGRVTVLTGRNGAGKSTTLQAIAGLTAPSSGRITVAGVDVTNLAPA 385
R AP+DLTA IEPG+VTV GR+GAGKST + GL +P+SG + + ++
Sbjct 341 RATVAPFDLTASIEPGKVTVFRGRSGAGKSTAAAVVLGLVSPTSGSARIGRTPIERISKE 400
Query 386 AWWRQLSWLPQRPVLVPGTVRHNL-VLLGPVDDLERACAAAGFDAVLDELPRGLDTVLGR 444
+ WRQ+SW+PQRP ++PGTV N+ LG +LERA + GFD V+ L G +T +G
Sbjct 401 SLWRQISWVPQRPAILPGTVLENMGCPLG--GELERAASVTGFDDVVACLSDGWNTRIGH 458
Query 445 GGVGLSLGQRQRLGLARALGSPAAVLLLDEPTAHLDARTEQHVLGAIVERARAGATVLVV 504
GGVGLS+GQRQRL LAR L P +LLDEP+AHLDA +E+ V A+ E G TVL V
Sbjct 459 GGVGLSVGQRQRLALARTLVKPRPFVLLDEPSAHLDAASEELVARAVRELRATGHTVLAV 518
Query 505 AHRQQVAAAGDRVVEV 520
AHR + D V++V
Sbjct 519 AHRSALIEEADAVIDV 534
>gi|315604386|ref|ZP_07879452.1| ABC superfamily ATP binding cassette transporter ABC protein
[Actinomyces sp. oral taxon 180 str. F0310]
gi|315314092|gb|EFU62143.1| ABC superfamily ATP binding cassette transporter ABC protein
[Actinomyces sp. oral taxon 180 str. F0310]
Length=562
Score = 367 bits (941), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 220/526 (42%), Positives = 313/526 (60%), Gaps = 27/526 (5%)
Query 21 IVAGVIDPANPGMAGLRRWLGPLSILLVLWGLRASIQWLQARLAQRGASAVIADLSGQVL 80
+V+ + P G A L L + + +++ RA + L+ R A A +A+L +V+
Sbjct 42 LVSSALSPIISGGASLVDVLPTIGAIGLVFACRAGCVAAREALSTRAAGAAVAELRRRVI 101
Query 81 TAVTARRPSQLAAQRDAAAVLITRGLDGLRPYFTGYLPTLLLAAILTPATVAVIGLYDLK 140
+ A P A A L T GL+ LRPYF +LP L+L +TPA + VI L D
Sbjct 102 DSAIALGPRWRATNGAQTAALATGGLEDLRPYFVAFLPQLVLVCTVTPAALGVILLLDFW 161
Query 141 SMAIVVITLPLIPIFMVLIGLATTNPSAAALAAMTAVQARLLDLIAGIPTLRALGRASGP 200
S I ++ +PLIP+FMVLIG T + S LA+M + A+LLDLI+G+PTLRALGR P
Sbjct 162 SAVIALLVIPLIPLFMVLIGRFTQSASDEKLASMKRLSAQLLDLISGLPTLRALGRERAP 221
Query 201 EQRIAELSADHRRSAMATLRIAFLSALVLELLATLGVALVAVGIGLRLVFGEMSLTAGLT 260
+ L + ++ M+TL +AFLS VLE L TL VALVAV +G+RLVFG MSL GL
Sbjct 222 RPHLRALGEANTKATMSTLSVAFLSGGVLEFLTTLSVALVAVEVGMRLVFGHMSLFHGLA 281
Query 261 VLLLAPEVYWPLRRVGVQFHAAADGRTAADKAFALLGES---------PSPTPGRRTVTA 311
V++LAPEV+ PLR+VG QFHA+A+G TA+ AF ++ E+ P P R +
Sbjct 282 VIMLAPEVFEPLRQVGAQFHASANGVTASRAAFDIIEEAEALPPAGSLPCPDMSRTDIV- 340
Query 312 RGGVIRLERLSVRGRDGRAPYDLTADIEPGRVTVLTGRNGAGKSTTLQAIAGLTAPSSGR 371
L+ + VR R+ AP + + P VT L+G +GAGKST + + T P GR
Sbjct 341 ------LDGVGVRSREAWAPSPTSGIVRPATVTALSGPSGAGKSTLVSCLLSDTVPDCGR 394
Query 372 ITV----------AGVDVTNLAPAAWWRQLSWLPQRPVLVPGTVRHNLVLLGPVDDLERA 421
I + + + ++ ++PA+W +SW+PQ P L PGT+ ++ L P++ L RA
Sbjct 395 ILLRSAASGGSARSDLPLSEVSPASWRSTISWVPQSPTLAPGTILDSMGGL-PLESLTRA 453
Query 422 CAAAGFDAVLDELPRGLDTVLGRGGVGLSLGQRQRLGLARALGSPAAVLLLDEPTAHLDA 481
A GFDAVL E P G +TV+GRGG+GLS+GQRQRL L RAL + + +++LDEPTAHLDA
Sbjct 454 AEATGFDAVLSEAPDGWNTVIGRGGIGLSVGQRQRLALTRALAADSQIVILDEPTAHLDA 513
Query 482 RTEQHVLGAIVERARAGATVLVVAHRQQVAAAGDRVVEVNSDGFRR 527
+E+ ++GAI G T++V+AHR V D V++V + +
Sbjct 514 VSEETIIGAINAMRAQGRTLIVIAHRSAVLDIADTVIDVTAAAIKE 559
>gi|296141242|ref|YP_003648485.1| cysteine ABC transporter permease/ATP-binding protein [Tsukamurella
paurometabola DSM 20162]
gi|296029376|gb|ADG80146.1| ABC transporter, CydDC cysteine exporter (CydDC- E) family, permease/ATP-binding
protein CydD [Tsukamurella paurometabola
DSM 20162]
Length=551
Score = 366 bits (940), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 262/535 (49%), Positives = 315/535 (59%), Gaps = 38/535 (7%)
Query 1 VACGV----GISGCAIGSAIVLASIVAGVIDPANPGMAGLRRWLGPLSILLVLWGLRASI 56
VACGV + A G A VLA +V G M LR GP+ V +R ++
Sbjct 39 VACGVVDTAALIALAYGVATVLARLVTGAT-----AMTELR---GPVIAAAVAAAVRVAV 90
Query 57 QWLQARLAQRGASAVIADLSGQVLTAVTARRPSQLAAQRDAAAVLITRGLDGLRPYFTGY 116
++ R+ +R A ++ L L AV R + A RD +TRGLD L PY TGY
Sbjct 91 ASVRGRIERRAADRTVSQLRSAALGAVGPGR-LPVGADRDELRTALTRGLDDLPPYLTGY 149
Query 117 LPTLLLAAILTPATVAVIGLYDLKSMAIVVITLPLIPIFMVLIGLATTNPSAAALAAMTA 176
LP L L+ I TPA V VI L D S AI + TLPL+PIFMVLIGL T + + LAAM+
Sbjct 150 LPALALSVIATPALVLVIFLADPVSGAIALGTLPLLPIFMVLIGLLTRDRTRRRLAAMSR 209
Query 177 VQARLLDLIAGIPTLRALGRASGPEQRIAELSADHRRSAMATLRIAFLSALVLELLATLG 236
+ ARLLDL+AG+PTLRALGR GPE+ + EL + M LRIAFLS++ LELLATL
Sbjct 210 LSARLLDLVAGLPTLRALGRERGPERSVRELGDRNATETMGALRIAFLSSMALELLATLC 269
Query 237 VALVAVGIGLRLVFGEMSLTAGLTVLLLAPEVYWPLRRVGVQFHAAADGRTAADKAFALL 296
VALVAV IGLRLVFG M L G+ L+LAPEVY PLR VG QFHAA G A + FALL
Sbjct 270 VALVAVSIGLRLVFGNMDLLPGVFALILAPEVYRPLRSVGAQFHAAEQGLEATSRVFALL 329
Query 297 GESPSPT-PGRRTVTARGGVIRLERLSVRGRDGRAPYDLTADIEPGRVTVLTGRNGAGKS 355
PG TA GVI + ++V GRDG AP +A + PG VTVLTG NG+GKS
Sbjct 330 DAPAPAAGPG----TAVTGVIEIRGVTVCGRDGAAPSGFSAVLRPGTVTVLTGPNGSGKS 385
Query 356 TTLQAIAGLTAPSSGRITVAGVDVTNLAPAAWWRQLSWLPQRPVLVPGTVRHNLVLLGPV 415
T L +AGLT P +G +TV G +T P WW +++W PQ P L PGT+ HN LLG
Sbjct 386 TLLTVLAGLTPPDAGTVTVDGTPLTG-GP-DWWNRVAWCPQHPYLEPGTLAHNFTLLG-- 441
Query 416 DDLERACAAAGFDAVLDELPRGLDTV---------LGRGGVGLSLGQRQRLGLARALGSP 466
A A V++E GLD V +G GG GLS GQRQRL LAR L
Sbjct 442 -----APGPATVPGVVEE--TGLDEVVAEAGWGRPVGVGGSGLSAGQRQRLALARTLAVG 494
Query 467 AAVLLLDEPTAHLDARTEQHVLGAIVERARAGATVLVVAHRQQVAAAGDRVVEVN 521
VLL DEPTAHLD Q VL A+ RA GA V++V H QV AA D V+EV+
Sbjct 495 RDVLLFDEPTAHLDPAHAQRVLAALRTRAAGGALVVIVGHDAQVLAAADHVLEVS 549
>gi|336320292|ref|YP_004600260.1| cysteine ABC transporte permease/ATP-binding protein CydD [Cellvibrio
gilvus ATCC 13127]
gi|336103873|gb|AEI11692.1| ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding
protein CydD [Cellvibrio gilvus ATCC 13127]
Length=567
Score = 366 bits (939), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 236/480 (50%), Positives = 297/480 (62%), Gaps = 14/480 (2%)
Query 53 RASIQWLQARLAQRGASAVIADLSGQVLTAVTARRPSQLAAQRDAAAV-LITRGLDGLRP 111
R + LQ R A R A I +L V+ A+ P +L R V L TRGLD L P
Sbjct 76 RTLVTTLQERYAHRAAVRAIGELREAVVARAVAQGPRRLGDGRGPHVVALATRGLDALEP 135
Query 112 YFTGYLPTLLLAAILTPATVAVIGLYDLKSMAIVVITLPLIPIFMVLIGLATTNPSAAAL 171
YF YLP L+LAA +TPAT+ VI + S I+V LPL+PIFM L+G T S L
Sbjct 136 YFVRYLPQLVLAATVTPATLLVILGQEWVSAVILVAVLPLVPIFMWLVGRLTQGRSERGL 195
Query 172 AAMTAVQARLLDLIAGIPTLRALGRASGPEQRIAELSADHRRSAMATLRIAFLSALVLEL 231
A M + A++LDL+AG+PTLRALGR +GP R+ L HRR+ M TLRIAFLS +VLEL
Sbjct 196 ATMQRLSAQVLDLLAGLPTLRALGREAGPAARVRSLGDAHRRATMGTLRIAFLSGMVLEL 255
Query 232 LATLGVALVAVGIGLRLVFGEMSLTAGLTVLLLAPEVYWPLRRVGVQFHAAADGRTAADK 291
L TL +ALVAVGIGLRLV G + L GL VL+LAPEV+ PLR VG QFHA+ DG AA+
Sbjct 256 LTTLSIALVAVGIGLRLVDGHLDLVTGLAVLVLAPEVFAPLRAVGAQFHASTDGVAAAEA 315
Query 292 AFALLGESPSPTPGRRTV-TARGGVIRLERLSVRGRDGRAPYDLTADIEPGRVTVLTGRN 350
AFA+L E G R R + +E +SV G AP+D++ + PGRVT L G
Sbjct 316 AFAILDEPADDHDGTRPAPDLRAARLHVEHVSVASARGLAPHDVSFTLAPGRVTALAGPP 375
Query 351 GAGKSTTLQAIAGLTAPSSG---------RITVAGVD-VTNLAPAAWWRQLSWLPQRPVL 400
GAGKSTT++ + GL P++G R+TVA D ++ A+ WRQ++W+PQR V+
Sbjct 376 GAGKSTTVEVLLGLLRPTTGRVTLDDGAARVTVADADGAPDVVRASLWRQVAWVPQRAVI 435
Query 401 VPGTVRHNLVLLGPVDDLERACAAAGFDAVLDELPRGLDTVLGRGGVGLSLGQRQRLGLA 460
PGT+ + G D A G DAV+DELP G DT +GRGG GLS+GQ QR+ L
Sbjct 436 EPGTLVATVG--GDADARTHAARVTGLDAVVDELPDGWDTPVGRGGHGLSVGQAQRVALT 493
Query 461 RALGSPAAVLLLDEPTAHLDARTEQHVLGAIVERARAGATVLVVAHRQQVAAAGDRVVEV 520
RAL AA+++LDEPTAHLD EQ +L + AG TVL+VAHR + A D VVEV
Sbjct 494 RALVGDAALVVLDEPTAHLDVNAEQVLLQTVAALREAGRTVLLVAHRPALLACADEVVEV 553
>gi|332670936|ref|YP_004453944.1| cysteine ABC transporter permease/ATP-binding protein CydD [Cellulomonas
fimi ATCC 484]
gi|332339974|gb|AEE46557.1| ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding
protein CydD [Cellulomonas fimi ATCC 484]
Length=550
Score = 366 bits (939), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 244/480 (51%), Positives = 301/480 (63%), Gaps = 21/480 (4%)
Query 53 RASIQWLQARLAQRGASAVIADLSGQVLTAVTARRPSQLAAQRDAAAV-LITRGLDGLRP 111
R + LQ R A R AS + +L V+ P LAA V L+TRGLD L P
Sbjct 71 RVLVTGLQERFAHRAASRAVGELRDAVVGRAVELGPRYLAAGHGPGIVTLVTRGLDALEP 130
Query 112 YFTGYLPTLLLAAILTPATVAVIGLYDLKSMAIVVITLPLIPIFMVLIGLATTNPSAAAL 171
YF YLP L+LAA +TP TV V+ D S I++ T+PL+P+FMVL+G T S L
Sbjct 131 YFVRYLPQLVLAATVTPGTVLVVLGLDWVSALILLGTIPLVPVFMVLVGRLTQGRSERGL 190
Query 172 AAMTAVQARLLDLIAGIPTLRALGRASGPEQRIAELSADHRRSAMATLRIAFLSALVLEL 231
A M + A++LDL+AG+PTL+ALGR GP R+ L HRR+AM TLRIAFLS +VLEL
Sbjct 191 ATMQRLGAQVLDLVAGLPTLQALGREHGPAARVRALGDAHRRAAMGTLRIAFLSGMVLEL 250
Query 232 LATLGVALVAVGIGLRLVFGEMSLTAGLTVLLLAPEVYWPLRRVGVQFHAAADGRTAADK 291
L TL VALVAVGIGLRLV G + L GL VL+LAPEV+ PLR+VG QFHAAADG AA++
Sbjct 251 LTTLSVALVAVGIGLRLVEGHLDLVTGLAVLVLAPEVFLPLRQVGAQFHAAADGVAAAEQ 310
Query 292 AFALL-------GESPSPTPGRRTVTARGGVIRLERLSVRGRDGRAPYDLTADIEPGRVT 344
AFA+L G +P+P R TV RL + VR DG AP L A + PG V
Sbjct 311 AFAVLDEPAPARGSAPAPDLARTTV-------RLVGVGVRATDGTAPAGLDATVRPGTVV 363
Query 345 VLTGRNGAGKSTTLQAIAGLTAPSSGRITVAGVD-VTNLAPA---AWWRQLSWLPQRPVL 400
LTG +GAGK+T ++ + GL P G + + G D V LA A+W Q++WLPQRPVL
Sbjct 364 ALTGPSGAGKTTAVEVLLGLLRPDEGEVLLDGPDGVVALAEVDLDAYWSQVAWLPQRPVL 423
Query 401 VPGTVRHNLVLLGPVDDLERACAAAGFDAVLDELPRGLDTVLGRGGVGLSLGQRQRLGLA 460
PGT+ V+ G ERA A G DAVL LP G DT LGRGG GLS+GQRQR+ L
Sbjct 424 EPGTLAE--VVGGDRAARERAAALTGLDAVLGALPAGWDTTLGRGGAGLSVGQRQRVALT 481
Query 461 RALGSPAAVLLLDEPTAHLDARTEQHVLGAIVERARAGATVLVVAHRQQVAAAGDRVVEV 520
RAL SPA +++LDEPTAHLDA E+ VL + G TV++VAHR + A D V+ V
Sbjct 482 RALLSPAPLVVLDEPTAHLDATGERVVLDTVRALRDEGRTVVLVAHRASLTACADVVLTV 541
>gi|343521840|ref|ZP_08758806.1| thiol reductant ABC exporter, CydD subunit [Actinomyces sp. oral
taxon 175 str. F0384]
gi|343401249|gb|EGV13755.1| thiol reductant ABC exporter, CydD subunit [Actinomyces sp. oral
taxon 175 str. F0384]
Length=587
Score = 365 bits (936), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 226/491 (47%), Positives = 295/491 (61%), Gaps = 23/491 (4%)
Query 53 RASIQWLQARLAQRGASAVIADLSGQVLTAVTARRPSQLAAQRDAAAVLITRGLDGLRPY 112
RA + LQ A R A+ I +L VL P A A L+TR LD L PY
Sbjct 71 RALVVLLQEVHAHRSATETIVELRRLVLEHAARLGPRWQAIHGTQTATLLTRALDDLEPY 130
Query 113 FTGYLPTLLLAAILTPATVAVIGLYDLKSMAIVVITLPLIPIFMVLIGLATTNPSAAALA 172
FT YLP L+LA+ +TPATV V+ D + VV TLPLIPIFM+LIG T + S L
Sbjct 131 FTRYLPQLVLASTVTPATVLVLLTQDWSAAVAVVCTLPLIPIFMILIGRMTQSVSQERLK 190
Query 173 AMTAVQARLLDLIAGIPTLRALGRASGPEQRIAELSADHRRSAMATLRIAFLSALVLELL 232
M + ++LDLI+G+PTL+A GR GP +++ LS +RR+ M+TLR+AFLS VLE +
Sbjct 191 TMQVLGDQVLDLISGLPTLKAFGRERGPVEQVRSLSRSYRRTTMSTLRVAFLSGAVLEFI 250
Query 233 ATLGVALVAVGIGLRLVFGEMSLTAGLTVLLLAPEVYWPLRRVGVQFHAAADGRTAADKA 292
TL VA++AV IG RLV G M L GL VL++APEVY PLR+VG QFHA+A+G AA+
Sbjct 251 TTLSVAIIAVQIGFRLVAGRMDLFTGLLVLMVAPEVYQPLRQVGFQFHASANGVAAANAV 310
Query 293 FALLGESPSPTPGRRTVTA-RGGVIRLERLSVRGRDGRAPYDLTADIEPGRVTVLTGRNG 351
F +L ++P P G R I L+ +SV R AP L+A I PG + LTG +G
Sbjct 311 FEVL-QTPVPEHGDLPAPDLRSSTIELDEVSVASRGAWAPAGLSASIRPGSLVALTGPSG 369
Query 352 AGKSTTLQAIAGLTAPSSGRITVAG--------VDVTNLAPAAWWRQLSWLPQRPVLVPG 403
AGK+TT Q + GL P GR+ + VD+ + PA WW Q++W+PQRP + PG
Sbjct 370 AGKTTTTQVLLGLLPPDRGRVRIVPDGGAPSGVVDLAQIDPATWWEQIAWVPQRPTITPG 429
Query 404 TVRHNLVLLGPV-----------DDLERACAAAGFDAVLDELPRGLDTVLGRGGVGLSLG 452
TV N +LG D L A A GFD V+D LP+G T +G GVGLS+G
Sbjct 430 TVLDN--VLGHAEPGAAAAEDVPDVLVEAARATGFDKVVDGLPQGWWTPVGSAGVGLSVG 487
Query 453 QRQRLGLARALGSPAAVLLLDEPTAHLDARTEQHVLGAIVERARAGATVLVVAHRQQVAA 512
QRQRL L RAL S A ++++DEPTAHLDA +E HVL A+ +G TV+V+AHR + A
Sbjct 488 QRQRLTLTRALCSTAPLVVMDEPTAHLDAASEAHVLDAVRALHASGRTVVVIAHRPALMA 547
Query 513 AGDRVVEVNSD 523
++ + V S
Sbjct 548 LAEQTIAVTSQ 558
>gi|227494684|ref|ZP_03925000.1| ABC superfamily ATP binding cassette transporter, ABC/membrane
protein [Actinomyces coleocanis DSM 15436]
gi|226831866|gb|EEH64249.1| ABC superfamily ATP binding cassette transporter, ABC/membrane
protein [Actinomyces coleocanis DSM 15436]
Length=607
Score = 364 bits (934), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 222/537 (42%), Positives = 315/537 (59%), Gaps = 23/537 (4%)
Query 7 ISGCAIGSAIVLASIVA--GVIDPANPGMAGLRRWLGPLSILLVLWGLRASIQWLQARLA 64
I+G IG+ + +A I+A G I P +++L+V+ R ++ ++ A
Sbjct 24 ITGT-IGTLLTIAQIMAISGAISPIITKEKQFSDVYWIIAVLVVIVLARITLTYIHRAYA 82
Query 65 QRGASAVIADLSGQVLTAVTARRPSQLAAQRDAAAVLITRGLDGLRPYFTGYLPTLLLAA 124
R A+ I +L QVL TA P L+ L TRGLD L PYF YLP L+L+
Sbjct 83 HRAANQAIQELRKQVLDKATALGPRWLSLNSTDTVTLTTRGLDDLGPYFVSYLPQLVLSM 142
Query 125 ILTPATVAVIGLYDLKSMAIVVITLPLIPIFMVLIGLATTNPSAAALAAMTAVQARLLDL 184
I TP +AVI D S I ++T+PLIPIFM+L+G T + S L M + ++LLDL
Sbjct 143 IATPLALAVILYLDFLSAFIALVTIPLIPIFMILVGKLTQDYSDQKLRTMERLGSQLLDL 202
Query 185 IAGIPTLRALGRASGPEQRIAELSADHRRSAMATLRIAFLSALVLELLATLGVALVAVGI 244
I+G+PTL+ALGR P + +L H R+ M TLR+AFLS +LE LATL VALVAV +
Sbjct 203 ISGLPTLKALGREWAPAAHVDKLGKTHARTTMQTLRVAFLSGGILEFLATLSVALVAVEV 262
Query 245 GLRLVFGEMSLTAGLTVLLLAPEVYWPLRRVGVQFHAAADGRTAADKAFALLGESPSPTP 304
G+RLV+ + L +GL +++LAPEVY PLR VG FHA+ADG AA+ AF ++ E+P+
Sbjct 263 GIRLVYDHVDLFSGLAIIMLAPEVYAPLREVGKNFHASADGVAAANAAFEII-EAPAELT 321
Query 305 GR--------RTVTARGGVIRLERLSVRGRDGRAPYDLTADIEPGRVTVLTGRNGAGKST 356
T T + +R L+V R AP +LTA I G +T LTG +GAGK+T
Sbjct 322 NTDIAVPASADTETLKIKSVRFNDLAVAARGFWAPAELTASIPAGSITALTGASGAGKTT 381
Query 357 TLQAIAGLTAPSSGRITVA------GVDVT---NLAPAAWWRQLSWLPQRPVLVPGTVRH 407
T+ + GL P+ G++++ ++T ++ WW ++W+PQ P +VPGTV+
Sbjct 382 TVLTLLGLLQPTIGQVSLELEKPNGNTELTALEKISKENWWHNVTWVPQAPAIVPGTVKE 441
Query 408 NLV--LLGPVDDLERACAAAGFDAVLDELPRGLDTVLGRGGVGLSLGQRQRLGLARALGS 465
N+ L A A GFD V++ L G DT LG GVGLS+GQRQRL L RAL
Sbjct 442 NIAQGQAYSTQQLNEAARATGFDTVVNSLQNGWDTQLGHAGVGLSVGQRQRLALTRALLH 501
Query 466 PAAVLLLDEPTAHLDARTEQHVLGAIVERARAGATVLVVAHRQQVAAAGDRVVEVNS 522
P V++LDEPTAHLD+ TE V+ I++ G+TV+V+AHR+ V +++V++
Sbjct 502 PTQVMILDEPTAHLDSLTEAQVIDTILKLQAHGSTVIVIAHRKAVTEVATHIIDVHA 558
>gi|296130127|ref|YP_003637377.1| ABC transporter, CydDC cysteine exporter (CydDC- E) family, permease/ATP-binding
protein CydD [Cellulomonas flavigena DSM
20109]
gi|296021942|gb|ADG75178.1| ABC transporter, CydDC cysteine exporter (CydDC- E) family, permease/ATP-binding
protein CydD [Cellulomonas flavigena DSM
20109]
Length=559
Score = 363 bits (932), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 236/471 (51%), Positives = 300/471 (64%), Gaps = 9/471 (1%)
Query 59 LQARLAQRGASAVIADLSGQVLTAVTARRPSQLAAQRDAAAV-LITRGLDGLRPYFTGYL 117
+Q R A R A+ +A+L +V+ A P + A A V L TRGLD L PYF YL
Sbjct 77 VQERYAHRAATRAVAELRERVVAHAAAVGPRRAAPADGAGLVTLATRGLDALEPYFVRYL 136
Query 118 PTLLLAAILTPATVAVIGLYDLKSMAIVVITLPLIPIFMVLIGLATTNPSAAALAAMTAV 177
P L+LAA LTPAT+ V+ D S AI+ T+PL+P+FM L+G+ T S LA M +
Sbjct 137 PQLVLAATLTPATLLVVLGLDGVSAAIIAGTVPLVPLFMWLVGVMTQGRSERGLATMQRL 196
Query 178 QARLLDLIAGIPTLRALGRASGPEQRIAELSADHRRSAMATLRIAFLSALVLELLATLGV 237
A++LDL+AG+ TLRA GR GP R+ EL HRR+ M TLR+AFLS +VLELL TL V
Sbjct 197 GAQVLDLLAGLGTLRAFGRERGPVARVRELGDAHRRATMGTLRVAFLSGMVLELLTTLCV 256
Query 238 ALVAVGIGLRLVFGEMSLTAGLTVLLLAPEVYWPLRRVGVQFHAAADGRTAADKAFALLG 297
ALVAVGIGLRLV+G + L GL VL+LAPEV+ PLR+VG FHA+ DG AAD+AFA+L
Sbjct 257 ALVAVGIGLRLVYGNVDLVTGLAVLVLAPEVFAPLRQVGAHFHASTDGVAAADRAFAVL- 315
Query 298 ESPSPTPGRRTV-TARGGVIRLERLSVRGRDGRAPYDLTADIEPGRVTVLTGRNGAGKST 356
E P P PGR G +R ++VR R G AP + ++ PGRV L G +GAGKST
Sbjct 316 EVPVPEPGRAPAPDLAAGRVRARGVAVRARGGWAPAPVDVELAPGRVVALVGPSGAGKST 375
Query 357 TLQAIAGLTAPSSGRITVAGVDVT-----NLAPAAWWRQLSWLPQRPVLVPGTVRHNLVL 411
T++ + GL AP +G + + D T ++ +WRQ++WLPQRPVL PGTV H L+
Sbjct 376 TVEVLLGLLAPDAGHVELVAADGTPTDLRDVDVHDYWRQVTWLPQRPVLEPGTV-HELLG 434
Query 412 LGPVDDLERACAAAGFDAVLDELPRGLDTVLGRGGVGLSLGQRQRLGLARALGSPAAVLL 471
P + +RA A G D V+ LP G TVLG GG GLS+GQRQRL L R L P+ V++
Sbjct 435 SPPPAERDRAAALTGLDTVVAVLPDGWSTVLGGGGAGLSVGQRQRLALTRTLLRPSPVVV 494
Query 472 LDEPTAHLDARTEQHVLGAIVERARAGATVLVVAHRQQVAAAGDRVVEVNS 522
LDEPTAHLDA EQ VL + AG+ VL+VAHR + D VV V +
Sbjct 495 LDEPTAHLDAAGEQVVLATLDALRDAGSAVLLVAHRASLTERADDVVHVTT 545
>gi|297571634|ref|YP_003697408.1| cysteine ABC transporter permease/ATP-binding protein [Arcanobacterium
haemolyticum DSM 20595]
gi|296931981|gb|ADH92789.1| ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding
protein CydD [Arcanobacterium haemolyticum
DSM 20595]
Length=553
Score = 362 bits (930), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 213/511 (42%), Positives = 299/511 (59%), Gaps = 14/511 (2%)
Query 21 IVAGVIDPANPGMAGLRRWLGPLSILLVLWGLRASIQWLQARLAQRGASAVIADLSGQVL 80
++A +I P G + L G L L+V++ R + +++ + R A VI +L +VL
Sbjct 39 LIAAIISPVFYGDSTLSASSGMLIALVVVFVARTGVTFVRGAIGHRSAMRVITELRTRVL 98
Query 81 TAVTARRPSQLA------AQRDAAAVLITRGLDGLRPYFTGYLPTLLLAAILTPATVAVI 134
R L + L TRGLD L YF +LP L L A TP + ++
Sbjct 99 -----RHAGDLGDRWLSRGNTNEVVTLTTRGLDDLEDYFVHFLPELFLTATATPLLLLMV 153
Query 135 GLYDLKSMAIVVITLPLIPIFMVLIGLATTNPSAAALAAMTAVQARLLDLIAGIPTLRAL 194
D S ++V+ LPLIP+FM+LIG T + SA L+AM + ++LLDL+ G+ TL+ +
Sbjct 154 TYMDFLSGLMIVLCLPLIPLFMILIGKMTASYSAKRLSAMQRLGSQLLDLLGGLATLKGV 213
Query 195 GRASGPEQRIAELSADHRRSAMATLRIAFLSALVLELLATLGVALVAVGIGLRLVFGEMS 254
GR SGP QR+ +L M TL +AFLS LE + TL ALVAV IGLR+V G +
Sbjct 214 GRESGPAQRVDDLGTSFAHRTMNTLYVAFLSGAALEFITTLTTALVAVSIGLRMVTGNVL 273
Query 255 LTAGLTVLLLAPEVYWPLRRVGVQFHAAADGRTAADKAFALLGESPSPTPGRRTVTARGG 314
L GL V++L PEV PLR VG QFHA+A+G AAD+AF +L P G V
Sbjct 274 LFEGLVVIMLTPEVLRPLREVGTQFHASANGVAAADRAFKILESKPYEHSGTAQVPDMSI 333
Query 315 V-IRLERLSVR--GRDGRAPYDLTADIEPGRVTVLTGRNGAGKSTTLQAIAGLTAPSSGR 371
IR + +SV GR AP +L A I PG VTV+ G +G+GKST + + GL SSGR
Sbjct 334 TPIRFDSVSVLAPGRATVAPANLNATIAPGTVTVIRGHSGSGKSTAVNVLLGLIPASSGR 393
Query 372 ITVAGVDVTNLAPAAWWRQLSWLPQRPVLVPGTVRHNLVLLGPVDDLERACAAAGFDAVL 431
+ + +++++L +WW ++W+PQRP +V GTV NL VD + A GFD V+
Sbjct 394 VLIGDLELSHLDRRSWWGTITWVPQRPAIVVGTVADNLGTDPSVDAVAEAVQLTGFDKVI 453
Query 432 DELPRGLDTVLGRGGVGLSLGQRQRLGLARALGSPAAVLLLDEPTAHLDARTEQHVLGAI 491
LP G DT+LG+GG+GLS+GQRQRL L +AL SP+ +++LDEP+AHLDA E++V I
Sbjct 454 ATLPHGWDTMLGQGGIGLSVGQRQRLALTKALMSPSQIVILDEPSAHLDAIAEEYVSATI 513
Query 492 VERARAGATVLVVAHRQQVAAAGDRVVEVNS 522
G TV+V+AHR ++ D +++V S
Sbjct 514 AHLRSQGRTVIVIAHRSAMSDLADSIIDVVS 544
Lambda K H
0.323 0.137 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1159267309268
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40