BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1626
Length=205
Score E
Sequences producing significant alignments: (Bits) Value
gi|15841081|ref|NP_336118.1| response regulator [Mycobacterium t... 403 7e-111
gi|326903239|gb|EGE50172.1| two component system transcriptional... 403 8e-111
gi|15608764|ref|NP_216142.1| two-component system transcriptiona... 403 9e-111
gi|289574293|ref|ZP_06454520.1| two component system transcripti... 401 3e-110
gi|289757728|ref|ZP_06517106.1| response regulator [Mycobacteriu... 397 4e-109
gi|118463323|ref|YP_882342.1| response regulator [Mycobacterium ... 376 1e-102
gi|254775608|ref|ZP_05217124.1| response regulator [Mycobacteriu... 375 2e-102
gi|41407417|ref|NP_960253.1| hypothetical protein MAP1319 [Mycob... 374 5e-102
gi|118617249|ref|YP_905581.1| two-component system transcription... 371 3e-101
gi|183982443|ref|YP_001850734.1| two-component system transcript... 370 5e-101
gi|296164495|ref|ZP_06847066.1| response regulator [Mycobacteriu... 370 6e-101
gi|289443078|ref|ZP_06432822.1| response regulator [Mycobacteriu... 369 2e-100
gi|240168004|ref|ZP_04746663.1| two-component system transcripti... 367 5e-100
gi|342860802|ref|ZP_08717452.1| response regulator [Mycobacteriu... 367 7e-100
gi|15827661|ref|NP_301924.1| two-component response regulatory p... 367 7e-100
gi|254820978|ref|ZP_05225979.1| response regulator [Mycobacteriu... 365 1e-99
gi|108799987|ref|YP_640184.1| response regulator receiver/ANTAR ... 347 4e-94
gi|118469816|ref|YP_887557.1| response regulator [Mycobacterium ... 346 1e-93
gi|126435615|ref|YP_001071306.1| response regulator receiver/ANT... 345 2e-93
gi|120403824|ref|YP_953653.1| response regulator receiver/ANTAR ... 337 5e-91
gi|145224159|ref|YP_001134837.1| response regulator receiver/ANT... 334 4e-90
gi|289750171|ref|ZP_06509549.1| response regulator [Mycobacteriu... 330 7e-89
gi|169629712|ref|YP_001703361.1| two-component response regulato... 326 1e-87
gi|333990761|ref|YP_004523375.1| two-component system transcript... 324 4e-87
gi|226306815|ref|YP_002766775.1| two-component response regulato... 321 5e-86
gi|229492695|ref|ZP_04386496.1| response regulator [Rhodococcus ... 320 5e-86
gi|111018012|ref|YP_700984.1| response regulator [Rhodococcus jo... 311 4e-83
gi|226360139|ref|YP_002777917.1| two-component response regulato... 310 1e-82
gi|54023838|ref|YP_118080.1| putative two-component system respo... 309 1e-82
gi|312139907|ref|YP_004007243.1| two component system response r... 306 1e-81
gi|343927506|ref|ZP_08766977.1| putative two-component response ... 293 1e-77
gi|333919142|ref|YP_004492723.1| Response regulator [Amycolicico... 291 4e-77
gi|300787996|ref|YP_003768287.1| two-component system response r... 290 8e-77
gi|257056585|ref|YP_003134417.1| response regulator with putativ... 289 2e-76
gi|302528128|ref|ZP_07280470.1| two-component system response re... 287 5e-76
gi|134101938|ref|YP_001107599.1| putative two-component system r... 285 3e-75
gi|262202790|ref|YP_003273998.1| response regulator receiver [Go... 285 3e-75
gi|256379544|ref|YP_003103204.1| response regulator receiver and... 283 1e-74
gi|72161585|ref|YP_289242.1| response regulator receiver [Thermo... 278 4e-73
gi|254387264|ref|ZP_05002525.1| two-component system response re... 276 2e-72
gi|326382643|ref|ZP_08204334.1| response regulator receiver [Gor... 275 3e-72
gi|297198977|ref|ZP_06916374.1| two-component system response re... 274 4e-72
gi|331697662|ref|YP_004333901.1| response regulator receiver and... 274 5e-72
gi|297194982|ref|ZP_06912380.1| two-component system response re... 274 5e-72
gi|271964457|ref|YP_003338653.1| response regulator [Streptospor... 274 6e-72
gi|297562099|ref|YP_003681073.1| response regulator receiver and... 274 7e-72
gi|328881687|emb|CCA54926.1| putative two-component system respo... 274 7e-72
gi|21220495|ref|NP_626274.1| two-component system response regul... 273 1e-71
gi|302533855|ref|ZP_07286197.1| two-component system response re... 273 1e-71
gi|329940869|ref|ZP_08290149.1| two-component system response re... 273 1e-71
>gi|15841081|ref|NP_336118.1| response regulator [Mycobacterium tuberculosis CDC1551]
gi|253799336|ref|YP_003032337.1| two component system transcriptional regulator [Mycobacterium
tuberculosis KZN 1435]
gi|254231827|ref|ZP_04925154.1| hypothetical protein TBCG_01579 [Mycobacterium tuberculosis C]
20 more sequence titles
Length=208
Score = 403 bits (1036), Expect = 7e-111, Method: Compositional matrix adjust.
Identities = 205/205 (100%), Positives = 205/205 (100%), Gaps = 0/205 (0%)
Query 1 MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD 60
MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD
Sbjct 4 MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD 63
Query 61 LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD 120
LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD
Sbjct 64 LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD 123
Query 121 LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA 180
LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA
Sbjct 124 LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA 183
Query 181 AMDRRTTMKRVAEVVLETLGTPKDT 205
AMDRRTTMKRVAEVVLETLGTPKDT
Sbjct 184 AMDRRTTMKRVAEVVLETLGTPKDT 208
>gi|326903239|gb|EGE50172.1| two component system transcriptional regulator [Mycobacterium
tuberculosis W-148]
Length=232
Score = 403 bits (1036), Expect = 8e-111, Method: Compositional matrix adjust.
Identities = 205/205 (100%), Positives = 205/205 (100%), Gaps = 0/205 (0%)
Query 1 MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD 60
MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD
Sbjct 4 MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD 63
Query 61 LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD 120
LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD
Sbjct 64 LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD 123
Query 121 LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA 180
LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA
Sbjct 124 LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA 183
Query 181 AMDRRTTMKRVAEVVLETLGTPKDT 205
AMDRRTTMKRVAEVVLETLGTPKDT
Sbjct 184 AMDRRTTMKRVAEVVLETLGTPKDT 208
>gi|15608764|ref|NP_216142.1| two-component system transcriptional regulator [Mycobacterium
tuberculosis H37Rv]
gi|31792812|ref|NP_855305.1| two-component system transcriptional regulator [Mycobacterium
bovis AF2122/97]
gi|121637533|ref|YP_977756.1| putative two-component system transcriptional regulator [Mycobacterium
bovis BCG str. Pasteur 1173P2]
48 more sequence titles
Length=205
Score = 403 bits (1035), Expect = 9e-111, Method: Compositional matrix adjust.
Identities = 205/205 (100%), Positives = 205/205 (100%), Gaps = 0/205 (0%)
Query 1 MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD 60
MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD
Sbjct 1 MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD 60
Query 61 LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD 120
LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD
Sbjct 61 LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD 120
Query 121 LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA 180
LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA
Sbjct 121 LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA 180
Query 181 AMDRRTTMKRVAEVVLETLGTPKDT 205
AMDRRTTMKRVAEVVLETLGTPKDT
Sbjct 181 AMDRRTTMKRVAEVVLETLGTPKDT 205
>gi|289574293|ref|ZP_06454520.1| two component system transcriptional regulator [Mycobacterium
tuberculosis K85]
gi|339631682|ref|YP_004723324.1| two-component system transcriptional regulator [Mycobacterium
africanum GM041182]
gi|289538724|gb|EFD43302.1| two component system transcriptional regulator [Mycobacterium
tuberculosis K85]
gi|339331038|emb|CCC26710.1| putative two-component system transcriptional regulator [Mycobacterium
africanum GM041182]
Length=205
Score = 401 bits (1030), Expect = 3e-110, Method: Compositional matrix adjust.
Identities = 204/205 (99%), Positives = 205/205 (100%), Gaps = 0/205 (0%)
Query 1 MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD 60
MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD
Sbjct 1 MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD 60
Query 61 LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD 120
LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGA+AYLVKPFSISD
Sbjct 61 LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAIAYLVKPFSISD 120
Query 121 LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA 180
LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA
Sbjct 121 LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA 180
Query 181 AMDRRTTMKRVAEVVLETLGTPKDT 205
AMDRRTTMKRVAEVVLETLGTPKDT
Sbjct 181 AMDRRTTMKRVAEVVLETLGTPKDT 205
>gi|289757728|ref|ZP_06517106.1| response regulator [Mycobacterium tuberculosis T85]
gi|289713292|gb|EFD77304.1| response regulator [Mycobacterium tuberculosis T85]
Length=205
Score = 397 bits (1021), Expect = 4e-109, Method: Compositional matrix adjust.
Identities = 202/202 (100%), Positives = 202/202 (100%), Gaps = 0/202 (0%)
Query 1 MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD 60
MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD
Sbjct 4 MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD 63
Query 61 LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD 120
LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD
Sbjct 64 LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD 123
Query 121 LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA 180
LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA
Sbjct 124 LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA 183
Query 181 AMDRRTTMKRVAEVVLETLGTP 202
AMDRRTTMKRVAEVVLETLGTP
Sbjct 184 AMDRRTTMKRVAEVVLETLGTP 205
>gi|118463323|ref|YP_882342.1| response regulator [Mycobacterium avium 104]
gi|118164610|gb|ABK65507.1| response regulator [Mycobacterium avium 104]
gi|336457769|gb|EGO36763.1| response regulator with putative antiterminator output domain
protein [Mycobacterium avium subsp. paratuberculosis S397]
Length=207
Score = 376 bits (965), Expect = 1e-102, Method: Compositional matrix adjust.
Identities = 191/204 (94%), Positives = 197/204 (97%), Gaps = 0/204 (0%)
Query 1 MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD 60
MTGPTTD DAAVPRRVLIAEDEALIR+DLAEMLREEGYEIVGEAGDGQEAVELAE H+PD
Sbjct 4 MTGPTTDTDAAVPRRVLIAEDEALIRLDLAEMLREEGYEIVGEAGDGQEAVELAERHRPD 63
Query 61 LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD 120
LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPF+ISD
Sbjct 64 LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFTISD 123
Query 121 LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA 180
LIPAIELAVSRF EI LE EVATLSERLETRKLVERAKGLLQT+ GMTEP+AFKWIQRA
Sbjct 124 LIPAIELAVSRFSEIAELEREVATLSERLETRKLVERAKGLLQTEQGMTEPEAFKWIQRA 183
Query 181 AMDRRTTMKRVAEVVLETLGTPKD 204
AMDRRTTMKRVAEVVLETLGTPK+
Sbjct 184 AMDRRTTMKRVAEVVLETLGTPKE 207
>gi|254775608|ref|ZP_05217124.1| response regulator [Mycobacterium avium subsp. avium ATCC 25291]
Length=204
Score = 375 bits (963), Expect = 2e-102, Method: Compositional matrix adjust.
Identities = 191/204 (94%), Positives = 197/204 (97%), Gaps = 0/204 (0%)
Query 1 MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD 60
MTGPTTD DAAVPRRVLIAEDEALIR+DLAEMLREEGYEIVGEAGDGQEAVELAE H+PD
Sbjct 1 MTGPTTDTDAAVPRRVLIAEDEALIRLDLAEMLREEGYEIVGEAGDGQEAVELAERHRPD 60
Query 61 LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD 120
LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPF+ISD
Sbjct 61 LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFTISD 120
Query 121 LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA 180
LIPAIELAVSRF EI LE EVATLSERLETRKLVERAKGLLQT+ GMTEP+AFKWIQRA
Sbjct 121 LIPAIELAVSRFSEIAELEREVATLSERLETRKLVERAKGLLQTEQGMTEPEAFKWIQRA 180
Query 181 AMDRRTTMKRVAEVVLETLGTPKD 204
AMDRRTTMKRVAEVVLETLGTPK+
Sbjct 181 AMDRRTTMKRVAEVVLETLGTPKE 204
>gi|41407417|ref|NP_960253.1| hypothetical protein MAP1319 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41395769|gb|AAS03636.1| hypothetical protein MAP_1319 [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=207
Score = 374 bits (960), Expect = 5e-102, Method: Compositional matrix adjust.
Identities = 190/204 (94%), Positives = 196/204 (97%), Gaps = 0/204 (0%)
Query 1 MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD 60
MTGPTTD DAAVPRRVLIAEDEALIR+DLAEMLREEGYEIVGEAGDGQEAVELAE H+PD
Sbjct 4 MTGPTTDTDAAVPRRVLIAEDEALIRLDLAEMLREEGYEIVGEAGDGQEAVELAERHRPD 63
Query 61 LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD 120
LVIMDVKMPRRDGIDA SEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPF+ISD
Sbjct 64 LVIMDVKMPRRDGIDATSEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFTISD 123
Query 121 LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA 180
LIPAIELAVSRF EI LE EVATLSERLETRKLVERAKGLLQT+ GMTEP+AFKWIQRA
Sbjct 124 LIPAIELAVSRFSEIAELEREVATLSERLETRKLVERAKGLLQTEQGMTEPEAFKWIQRA 183
Query 181 AMDRRTTMKRVAEVVLETLGTPKD 204
AMDRRTTMKRVAEVVLETLGTPK+
Sbjct 184 AMDRRTTMKRVAEVVLETLGTPKE 207
>gi|118617249|ref|YP_905581.1| two-component system transcriptional regulator [Mycobacterium
ulcerans Agy99]
gi|118569359|gb|ABL04110.1| two-component system transcriptional regulator [Mycobacterium
ulcerans Agy99]
Length=208
Score = 371 bits (952), Expect = 3e-101, Method: Compositional matrix adjust.
Identities = 187/202 (93%), Positives = 195/202 (97%), Gaps = 0/202 (0%)
Query 1 MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD 60
MTGPTTDADAA RRVLIAEDEALIRMDLAEMLREEGY+IVGEAGDGQEAVELAELHKPD
Sbjct 4 MTGPTTDADAAKTRRVLIAEDEALIRMDLAEMLREEGYDIVGEAGDGQEAVELAELHKPD 63
Query 61 LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD 120
LVIMDVKMPRRDGIDAASEIA+KRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPF++SD
Sbjct 64 LVIMDVKMPRRDGIDAASEIATKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFTVSD 123
Query 121 LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA 180
L+PAIELAVSRF EI+ALE EVATLS+RLETRKLVERAKGLLQ K GMTEP+AFKWIQRA
Sbjct 124 LVPAIELAVSRFSEISALENEVATLSDRLETRKLVERAKGLLQAKQGMTEPEAFKWIQRA 183
Query 181 AMDRRTTMKRVAEVVLETLGTP 202
AMDRRTTMKRVAEVVLETL TP
Sbjct 184 AMDRRTTMKRVAEVVLETLDTP 205
>gi|183982443|ref|YP_001850734.1| two-component system transcriptional regulator [Mycobacterium
marinum M]
gi|183175769|gb|ACC40879.1| two-component system transcriptional regulator [Mycobacterium
marinum M]
Length=205
Score = 370 bits (951), Expect = 5e-101, Method: Compositional matrix adjust.
Identities = 187/202 (93%), Positives = 195/202 (97%), Gaps = 0/202 (0%)
Query 1 MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD 60
MTGPTTDADAA RRVLIAEDEALIRMDLAEMLREEGY+IVGEAGDGQEAVELAELHKPD
Sbjct 1 MTGPTTDADAAKTRRVLIAEDEALIRMDLAEMLREEGYDIVGEAGDGQEAVELAELHKPD 60
Query 61 LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD 120
LVIMDVKMPRRDGIDAASEIA+KRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPF++SD
Sbjct 61 LVIMDVKMPRRDGIDAASEIATKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFTVSD 120
Query 121 LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA 180
L+PAIELAVSRF EI+ALE EVATLS+RLETRKLVERAKGLLQ K GMTEP+AFKWIQRA
Sbjct 121 LVPAIELAVSRFSEISALENEVATLSDRLETRKLVERAKGLLQAKQGMTEPEAFKWIQRA 180
Query 181 AMDRRTTMKRVAEVVLETLGTP 202
AMDRRTTMKRVAEVVLETL TP
Sbjct 181 AMDRRTTMKRVAEVVLETLDTP 202
>gi|296164495|ref|ZP_06847066.1| response regulator [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295900095|gb|EFG79530.1| response regulator [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=207
Score = 370 bits (950), Expect = 6e-101, Method: Compositional matrix adjust.
Identities = 188/200 (94%), Positives = 194/200 (97%), Gaps = 0/200 (0%)
Query 1 MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD 60
MTGPTTD DAAVPRRVLIAEDEALIR+DLAEMLREEGYEIVGEAGDGQEAVELAE H+PD
Sbjct 4 MTGPTTDTDAAVPRRVLIAEDEALIRLDLAEMLREEGYEIVGEAGDGQEAVELAEQHRPD 63
Query 61 LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD 120
LVIMDVKMPRRDGIDAASEIA+KRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPF+ISD
Sbjct 64 LVIMDVKMPRRDGIDAASEIAAKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFTISD 123
Query 121 LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA 180
LIPAIELAVSRF EI+ LE EVATLSERLETRKLVERAKGLLQTK GMTEP+AFKWIQRA
Sbjct 124 LIPAIELAVSRFSEISELEREVATLSERLETRKLVERAKGLLQTKQGMTEPEAFKWIQRA 183
Query 181 AMDRRTTMKRVAEVVLETLG 200
AMDRRTTMKRVAEVVLETLG
Sbjct 184 AMDRRTTMKRVAEVVLETLG 203
>gi|289443078|ref|ZP_06432822.1| response regulator [Mycobacterium tuberculosis T46]
gi|289415997|gb|EFD13237.1| response regulator [Mycobacterium tuberculosis T46]
Length=199
Score = 369 bits (947), Expect = 2e-100, Method: Compositional matrix adjust.
Identities = 187/187 (100%), Positives = 187/187 (100%), Gaps = 0/187 (0%)
Query 1 MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD 60
MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD
Sbjct 4 MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD 63
Query 61 LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD 120
LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD
Sbjct 64 LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD 123
Query 121 LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA 180
LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA
Sbjct 124 LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA 183
Query 181 AMDRRTT 187
AMDRRTT
Sbjct 184 AMDRRTT 190
>gi|240168004|ref|ZP_04746663.1| two-component system transcriptional regulator [Mycobacterium
kansasii ATCC 12478]
Length=203
Score = 367 bits (943), Expect = 5e-100, Method: Compositional matrix adjust.
Identities = 188/202 (94%), Positives = 192/202 (96%), Gaps = 0/202 (0%)
Query 1 MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD 60
MTGPTTDADAA P RVLIAEDEALIRMDLAEMLREEGY+IVGEAGDGQEAVELAE HKPD
Sbjct 1 MTGPTTDADAAKPHRVLIAEDEALIRMDLAEMLREEGYDIVGEAGDGQEAVELAERHKPD 60
Query 61 LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD 120
LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPF+ SD
Sbjct 61 LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFTASD 120
Query 121 LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA 180
LIPAIELAVSRF EITALE EVA LS+RLETRKLVERAKGLLQ K GMTEP+AFKWIQRA
Sbjct 121 LIPAIELAVSRFSEITALEQEVAALSDRLETRKLVERAKGLLQAKQGMTEPEAFKWIQRA 180
Query 181 AMDRRTTMKRVAEVVLETLGTP 202
AMDRRTTMKRVAEVVLETL TP
Sbjct 181 AMDRRTTMKRVAEVVLETLDTP 202
>gi|342860802|ref|ZP_08717452.1| response regulator [Mycobacterium colombiense CECT 3035]
gi|342131826|gb|EGT85083.1| response regulator [Mycobacterium colombiense CECT 3035]
Length=205
Score = 367 bits (941), Expect = 7e-100, Method: Compositional matrix adjust.
Identities = 188/201 (94%), Positives = 193/201 (97%), Gaps = 0/201 (0%)
Query 1 MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD 60
MTGPTTD DAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAE H+PD
Sbjct 1 MTGPTTDTDAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAEAHRPD 60
Query 61 LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD 120
LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPF+ISD
Sbjct 61 LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFTISD 120
Query 121 LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA 180
LIPAIELAVSRF EI LE EVATLS+RLETRK+VERAKGLLQTK GMTEP+AFKWIQRA
Sbjct 121 LIPAIELAVSRFGEIAELEREVATLSDRLETRKVVERAKGLLQTKQGMTEPEAFKWIQRA 180
Query 181 AMDRRTTMKRVAEVVLETLGT 201
AMDRRTTMKRVAEVVLETL T
Sbjct 181 AMDRRTTMKRVAEVVLETLDT 201
>gi|15827661|ref|NP_301924.1| two-component response regulatory protein [Mycobacterium leprae
TN]
gi|221230138|ref|YP_002503554.1| putative two-component response regulatory protein [Mycobacterium
leprae Br4923]
gi|13093212|emb|CAC31667.1| possible two-component response regulatory protein [Mycobacterium
leprae]
gi|219933245|emb|CAR71381.1| possible two-component response regulatory protein [Mycobacterium
leprae Br4923]
Length=205
Score = 367 bits (941), Expect = 7e-100, Method: Compositional matrix adjust.
Identities = 186/205 (91%), Positives = 195/205 (96%), Gaps = 0/205 (0%)
Query 1 MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD 60
MTGPTTDADAA P RVLIAEDEALIR+DLAEMLR+EGY+IVGEA DGQEAVELAE HKPD
Sbjct 1 MTGPTTDADAATPHRVLIAEDEALIRLDLAEMLRDEGYDIVGEAADGQEAVELAERHKPD 60
Query 61 LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD 120
LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPF+ISD
Sbjct 61 LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFTISD 120
Query 121 LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA 180
LIPAI LA+SRF E+TALE EVATL++RLETRKLVERAKGLLQ K GMTEP+AFKWIQRA
Sbjct 121 LIPAIALAMSRFSELTALEREVATLADRLETRKLVERAKGLLQVKQGMTEPEAFKWIQRA 180
Query 181 AMDRRTTMKRVAEVVLETLGTPKDT 205
AMDRRTTMKRVAEVVLETL TPKDT
Sbjct 181 AMDRRTTMKRVAEVVLETLDTPKDT 205
>gi|254820978|ref|ZP_05225979.1| response regulator [Mycobacterium intracellulare ATCC 13950]
Length=204
Score = 365 bits (938), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 187/204 (92%), Positives = 195/204 (96%), Gaps = 0/204 (0%)
Query 1 MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD 60
MTGPTTD DAAVPRRVLIAEDEALIR+DLAEMLREEGYEIVGEAGDGQEAVELAE H+PD
Sbjct 1 MTGPTTDTDAAVPRRVLIAEDEALIRLDLAEMLREEGYEIVGEAGDGQEAVELAERHRPD 60
Query 61 LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD 120
LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPF+ISD
Sbjct 61 LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFTISD 120
Query 121 LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA 180
LIPAIELAVSRF EI LE EVA+LS+RLETRKLVERAKGLLQT+ GMTEP+AFKWIQRA
Sbjct 121 LIPAIELAVSRFGEIAELEREVASLSDRLETRKLVERAKGLLQTEQGMTEPEAFKWIQRA 180
Query 181 AMDRRTTMKRVAEVVLETLGTPKD 204
AMDRRTTMKRVAEVVLETL PK+
Sbjct 181 AMDRRTTMKRVAEVVLETLDPPKE 204
>gi|108799987|ref|YP_640184.1| response regulator receiver/ANTAR domain-containing protein [Mycobacterium
sp. MCS]
gi|119869099|ref|YP_939051.1| response regulator receiver/ANTAR domain-containing protein [Mycobacterium
sp. KMS]
gi|108770406|gb|ABG09128.1| response regulator receiver and ANTAR domain protein [Mycobacterium
sp. MCS]
gi|119695188|gb|ABL92261.1| response regulator receiver and ANTAR domain protein [Mycobacterium
sp. KMS]
Length=210
Score = 347 bits (891), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 179/203 (89%), Positives = 188/203 (93%), Gaps = 2/203 (0%)
Query 1 MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD 60
MTG TDA PRRVLIAEDEALIRMDLAEMLR+EGYEIVGEAGDGQEAVELAE +PD
Sbjct 4 MTGSPTDA--PTPRRVLIAEDEALIRMDLAEMLRDEGYEIVGEAGDGQEAVELAEQLRPD 61
Query 61 LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD 120
LVIMDVKMPRRDGIDAASEIASKRIAPIV+LTAFSQRDLVERARDAGAMAYLVKPF+++D
Sbjct 62 LVIMDVKMPRRDGIDAASEIASKRIAPIVILTAFSQRDLVERARDAGAMAYLVKPFNVND 121
Query 121 LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA 180
LIPAIE+AVSRF EI ALE EVATLS+RLETRKLVERAKGLLQ GMTEP+AFKWIQRA
Sbjct 122 LIPAIEVAVSRFSEIHALEQEVATLSDRLETRKLVERAKGLLQANQGMTEPEAFKWIQRA 181
Query 181 AMDRRTTMKRVAEVVLETLGTPK 203
AMDRRTTMKRVAEVVLETL TPK
Sbjct 182 AMDRRTTMKRVAEVVLETLDTPK 204
>gi|118469816|ref|YP_887557.1| response regulator [Mycobacterium smegmatis str. MC2 155]
gi|118171103|gb|ABK71999.1| response regulator [Mycobacterium smegmatis str. MC2 155]
Length=208
Score = 346 bits (888), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 177/203 (88%), Positives = 190/203 (94%), Gaps = 2/203 (0%)
Query 1 MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD 60
MTG TTDAD PRRVLIAEDEALIR+DLAEMLREEGYE+VGEAGDGQEAVE+AE +PD
Sbjct 1 MTGSTTDADR--PRRVLIAEDEALIRLDLAEMLREEGYEVVGEAGDGQEAVEMAESLRPD 58
Query 61 LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD 120
LVIMDVKMPRRDGIDAASEIASKRIAPIV+LTAFSQR+LVERARDAGAMAYLVKPF+I+D
Sbjct 59 LVIMDVKMPRRDGIDAASEIASKRIAPIVILTAFSQRELVERARDAGAMAYLVKPFNIND 118
Query 121 LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA 180
L+PAIE+AVSRF E++ALE EVATLSERLETRKLVERAKGLLQ KH MTEP+AFKWIQRA
Sbjct 119 LVPAIEVAVSRFAELSALETEVATLSERLETRKLVERAKGLLQAKHKMTEPEAFKWIQRA 178
Query 181 AMDRRTTMKRVAEVVLETLGTPK 203
AMDRRTTMKRVAEVVLETL K
Sbjct 179 AMDRRTTMKRVAEVVLETLDDTK 201
>gi|126435615|ref|YP_001071306.1| response regulator receiver/ANTAR domain-containing protein [Mycobacterium
sp. JLS]
gi|126235415|gb|ABN98815.1| response regulator receiver and ANTAR domain protein [Mycobacterium
sp. JLS]
Length=210
Score = 345 bits (886), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 178/203 (88%), Positives = 187/203 (93%), Gaps = 2/203 (0%)
Query 1 MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD 60
MTG TDA PRRVLIAEDEALIRMDLAEMLR+EGYEIVGEAGDGQEAVELAE +PD
Sbjct 4 MTGSPTDA--PTPRRVLIAEDEALIRMDLAEMLRDEGYEIVGEAGDGQEAVELAEQLRPD 61
Query 61 LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD 120
LVIMDVKMPRRDGIDAASEIASKRIAPIV+LTAFSQRDLVERARDAGAMAYLVKPF+++D
Sbjct 62 LVIMDVKMPRRDGIDAASEIASKRIAPIVILTAFSQRDLVERARDAGAMAYLVKPFNVND 121
Query 121 LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA 180
LIPAIE+AVSRF EI ALE EVATLS+RLETRKLVERAKGLLQ GMTEP+AFKWIQRA
Sbjct 122 LIPAIEVAVSRFSEIHALEQEVATLSDRLETRKLVERAKGLLQANQGMTEPEAFKWIQRA 181
Query 181 AMDRRTTMKRVAEVVLETLGTPK 203
AMDRRTTMKRVAEVVLETL PK
Sbjct 182 AMDRRTTMKRVAEVVLETLDAPK 204
>gi|120403824|ref|YP_953653.1| response regulator receiver/ANTAR domain-containing protein [Mycobacterium
vanbaalenii PYR-1]
gi|119956642|gb|ABM13647.1| response regulator receiver and ANTAR domain protein [Mycobacterium
vanbaalenii PYR-1]
Length=213
Score = 337 bits (865), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 171/193 (89%), Positives = 182/193 (95%), Gaps = 0/193 (0%)
Query 13 PRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPDLVIMDVKMPRRD 72
PRRVL+AEDEALIR+DLAEMLREEGYEIVGEAGDGQEAVELAE +PDLVIMDVKMPRRD
Sbjct 15 PRRVLVAEDEALIRLDLAEMLREEGYEIVGEAGDGQEAVELAEALRPDLVIMDVKMPRRD 74
Query 73 GIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISDLIPAIELAVSRF 132
GIDAASEIASKRIAPIV+LTAFSQR+LVERARDAGAMAYLVKPFSI+DLIPAIE+AVSRF
Sbjct 75 GIDAASEIASKRIAPIVILTAFSQRELVERARDAGAMAYLVKPFSITDLIPAIEVAVSRF 134
Query 133 REITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRAAMDRRTTMKRVA 192
E+T LE EVA LS+RLETRKLVERAKGLLQ K GM+EP+AFKWIQRAAMDRRTTMKRVA
Sbjct 135 SEMTELEKEVANLSDRLETRKLVERAKGLLQAKQGMSEPEAFKWIQRAAMDRRTTMKRVA 194
Query 193 EVVLETLGTPKDT 205
EVVLETL P DT
Sbjct 195 EVVLETLDPPADT 207
>gi|145224159|ref|YP_001134837.1| response regulator receiver/ANTAR domain-containing protein [Mycobacterium
gilvum PYR-GCK]
gi|315444494|ref|YP_004077373.1| response regulator with antiterminator output domain [Mycobacterium
sp. Spyr1]
gi|145216645|gb|ABP46049.1| response regulator receiver and ANTAR domain protein [Mycobacterium
gilvum PYR-GCK]
gi|315262797|gb|ADT99538.1| response regulator with putative antiterminator output domain
[Mycobacterium sp. Spyr1]
Length=229
Score = 334 bits (857), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 171/190 (90%), Positives = 179/190 (95%), Gaps = 0/190 (0%)
Query 13 PRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPDLVIMDVKMPRRD 72
P RVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAV+LAE +PDLVIMDVKMPRRD
Sbjct 31 PHRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVDLAESLRPDLVIMDVKMPRRD 90
Query 73 GIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISDLIPAIELAVSRF 132
GIDAASEIASKRIAPIV+LTAFSQR+LVERARDAGAMAYLVKPFSI+DLIPAIE+AVSRF
Sbjct 91 GIDAASEIASKRIAPIVILTAFSQRELVERARDAGAMAYLVKPFSITDLIPAIEVAVSRF 150
Query 133 REITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRAAMDRRTTMKRVA 192
EI LE EVATLS+RLETRKLVERAKGLLQ K GMTEP+AFKWIQRAAMDRRTTMKRVA
Sbjct 151 SEIAELEKEVATLSDRLETRKLVERAKGLLQAKQGMTEPEAFKWIQRAAMDRRTTMKRVA 210
Query 193 EVVLETLGTP 202
EVVLETL P
Sbjct 211 EVVLETLDPP 220
>gi|289750171|ref|ZP_06509549.1| response regulator [Mycobacterium tuberculosis T92]
gi|289690758|gb|EFD58187.1| response regulator [Mycobacterium tuberculosis T92]
Length=178
Score = 330 bits (846), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 170/175 (98%), Positives = 171/175 (98%), Gaps = 0/175 (0%)
Query 1 MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD 60
MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD
Sbjct 4 MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD 63
Query 61 LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD 120
LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD
Sbjct 64 LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD 123
Query 121 LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFK 175
LIPAIELAVSRFREITALEGEVATLSER + KLVERAKGLLQTKH MTEPDAFK
Sbjct 124 LIPAIELAVSRFREITALEGEVATLSERWKPGKLVERAKGLLQTKHEMTEPDAFK 178
>gi|169629712|ref|YP_001703361.1| two-component response regulatory protein [Mycobacterium abscessus
ATCC 19977]
gi|169241679|emb|CAM62707.1| Possible two-component response regulatory protein [Mycobacterium
abscessus]
Length=205
Score = 326 bits (835), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 164/201 (82%), Positives = 183/201 (92%), Gaps = 0/201 (0%)
Query 1 MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD 60
MTGP AA RRVL+AEDEALIR+DL EML EEGY++VG+AGDGQEAV+LAE KPD
Sbjct 1 MTGPQNTEPAAPARRVLVAEDEALIRLDLVEMLHEEGYDVVGQAGDGQEAVDLAEELKPD 60
Query 61 LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD 120
LVIMDVKMPRRDGIDAASEIA+KRIAPIV+LTAFSQRDLVE+ARDAGAMAYLVKPFS +D
Sbjct 61 LVIMDVKMPRRDGIDAASEIATKRIAPIVILTAFSQRDLVEKARDAGAMAYLVKPFSKTD 120
Query 121 LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA 180
L+PAIE+AVSRF E+TALE EV TL++RLETRKLVERAKG+LQ+ G+TEP+AFKWIQRA
Sbjct 121 LVPAIEVAVSRFGELTALEKEVQTLADRLETRKLVERAKGVLQSTQGLTEPEAFKWIQRA 180
Query 181 AMDRRTTMKRVAEVVLETLGT 201
AMDRRTTMKRVAEVVLETL T
Sbjct 181 AMDRRTTMKRVAEVVLETLDT 201
>gi|333990761|ref|YP_004523375.1| two-component system transcriptional regulator [Mycobacterium
sp. JDM601]
gi|333486729|gb|AEF36121.1| two-component system transcriptional regulator [Mycobacterium
sp. JDM601]
Length=207
Score = 324 bits (831), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 164/201 (82%), Positives = 184/201 (92%), Gaps = 0/201 (0%)
Query 1 MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD 60
MT T++ RRVLIAEDEALIR+DLAEMLRE+GYE+VGEAGDGQEAVELAEL +PD
Sbjct 1 MTASTSEGAPRPARRVLIAEDEALIRLDLAEMLREQGYEVVGEAGDGQEAVELAELLRPD 60
Query 61 LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD 120
LVI+DVKMPRRDGIDAASEIA KRIAPIV+LTAFSQRDLVERARDAGAMAYLVKPFS D
Sbjct 61 LVIIDVKMPRRDGIDAASEIAGKRIAPIVMLTAFSQRDLVERARDAGAMAYLVKPFSAGD 120
Query 121 LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA 180
L+PAIELAVSR EITALE EV++LSE+LETRKL+ERAKGLLQ+K G++EPDAF+WIQRA
Sbjct 121 LVPAIELAVSRSEEITALEREVSSLSEQLETRKLIERAKGLLQSKQGLSEPDAFRWIQRA 180
Query 181 AMDRRTTMKRVAEVVLETLGT 201
AMD+RTTM++VAEVVLETL T
Sbjct 181 AMDKRTTMRQVAEVVLETLDT 201
>gi|226306815|ref|YP_002766775.1| two-component response regulator [Rhodococcus erythropolis PR4]
gi|226185932|dbj|BAH34036.1| putative two-component response regulator [Rhodococcus erythropolis
PR4]
Length=208
Score = 321 bits (822), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 159/204 (78%), Positives = 179/204 (88%), Gaps = 0/204 (0%)
Query 1 MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD 60
M P + PRRV++AEDEALIRMDL EMLREEGY++VGEAGDGQ AVELAE KPD
Sbjct 4 MNSPQPQGNQLAPRRVVVAEDEALIRMDLVEMLREEGYDVVGEAGDGQVAVELAESLKPD 63
Query 61 LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD 120
LVIMDVKMPRRDGIDAASEIA+KRIAP+V+LTAFSQR+LVERARDAGAMAYLVKPFSISD
Sbjct 64 LVIMDVKMPRRDGIDAASEIAAKRIAPVVILTAFSQRELVERARDAGAMAYLVKPFSISD 123
Query 121 LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA 180
L+PA+ELAVSRFRE+TALE EVA LS+RLE RKL+ERAK +L + +TEP+AFKWIQRA
Sbjct 124 LVPAVELAVSRFREVTALEREVADLSDRLEARKLIERAKSVLMVRQALTEPEAFKWIQRA 183
Query 181 AMDRRTTMKRVAEVVLETLGTPKD 204
AMDRR+TMK VA+VVLETLG D
Sbjct 184 AMDRRSTMKAVAQVVLETLGGEPD 207
>gi|229492695|ref|ZP_04386496.1| response regulator [Rhodococcus erythropolis SK121]
gi|229320354|gb|EEN86174.1| response regulator [Rhodococcus erythropolis SK121]
Length=205
Score = 320 bits (821), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 159/204 (78%), Positives = 179/204 (88%), Gaps = 0/204 (0%)
Query 1 MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD 60
M P + PRRV++AEDEALIRMDL EMLREEGY++VGEAGDGQ AVELAE KPD
Sbjct 1 MNSPQPQGNQLAPRRVVVAEDEALIRMDLVEMLREEGYDVVGEAGDGQVAVELAESLKPD 60
Query 61 LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD 120
LVIMDVKMPRRDGIDAASEIA+KRIAP+V+LTAFSQR+LVERARDAGAMAYLVKPFSISD
Sbjct 61 LVIMDVKMPRRDGIDAASEIAAKRIAPVVILTAFSQRELVERARDAGAMAYLVKPFSISD 120
Query 121 LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA 180
L+PA+ELAVSRFRE+TALE EVA LS+RLE RKL+ERAK +L + +TEP+AFKWIQRA
Sbjct 121 LVPAVELAVSRFREVTALEREVADLSDRLEARKLIERAKSVLMVRQALTEPEAFKWIQRA 180
Query 181 AMDRRTTMKRVAEVVLETLGTPKD 204
AMDRR+TMK VA+VVLETLG D
Sbjct 181 AMDRRSTMKAVAQVVLETLGGEPD 204
>gi|111018012|ref|YP_700984.1| response regulator [Rhodococcus jostii RHA1]
gi|110817542|gb|ABG92826.1| possible response regulator [Rhodococcus jostii RHA1]
Length=206
Score = 311 bits (796), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 153/200 (77%), Positives = 177/200 (89%), Gaps = 0/200 (0%)
Query 1 MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD 60
M P + PRRV++AEDEALIR+DL EMLREEGY++VGEAGDGQ AV+LA KPD
Sbjct 1 MNAPQQQGVPSQPRRVVVAEDEALIRLDLVEMLREEGYDVVGEAGDGQAAVDLAVELKPD 60
Query 61 LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD 120
LVIMDVKMPRRDGIDAASEIA+KRIAP+V+LTAFSQR+LVERARDAGAMAYLVKPFS +D
Sbjct 61 LVIMDVKMPRRDGIDAASEIAAKRIAPVVILTAFSQRELVERARDAGAMAYLVKPFSTAD 120
Query 121 LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA 180
L+PA+ELA SRF+E+TALE E++ LSERLETRK+VERAKG+L K +TEP+AFKWIQRA
Sbjct 121 LVPAVELAASRFKEVTALEREISDLSERLETRKIVERAKGVLMEKQSLTEPEAFKWIQRA 180
Query 181 AMDRRTTMKRVAEVVLETLG 200
AMDRR+TMK VA+VVLETLG
Sbjct 181 AMDRRSTMKAVAQVVLETLG 200
>gi|226360139|ref|YP_002777917.1| two-component response regulator [Rhodococcus opacus B4]
gi|226238624|dbj|BAH48972.1| putative two-component response regulator [Rhodococcus opacus
B4]
Length=209
Score = 310 bits (793), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 152/200 (76%), Positives = 177/200 (89%), Gaps = 0/200 (0%)
Query 1 MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD 60
M P + RRV++AEDEALIR+DL EMLREEGY++VGEAGDGQ AV+LA KPD
Sbjct 4 MNAPQQQGVPSQARRVVVAEDEALIRLDLVEMLREEGYDVVGEAGDGQAAVDLAVELKPD 63
Query 61 LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD 120
LVIMDVKMPRRDGIDAASEIA+KRIAP+V+LTAFSQR+LVERARDAGAMAYLVKPFS++D
Sbjct 64 LVIMDVKMPRRDGIDAASEIAAKRIAPVVILTAFSQRELVERARDAGAMAYLVKPFSVAD 123
Query 121 LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA 180
L+PA+ELA SRF+E+TALE E++ LSERLETRK+VERAKG+L K +TEP+AFKWIQRA
Sbjct 124 LVPAVELAASRFKEVTALEREISDLSERLETRKIVERAKGVLMDKQSLTEPEAFKWIQRA 183
Query 181 AMDRRTTMKRVAEVVLETLG 200
AMDRR+TMK VA+VVLETLG
Sbjct 184 AMDRRSTMKAVAQVVLETLG 203
>gi|54023838|ref|YP_118080.1| putative two-component system response regulator [Nocardia farcinica
IFM 10152]
gi|54015346|dbj|BAD56716.1| putative two-component system response regulator [Nocardia farcinica
IFM 10152]
Length=204
Score = 309 bits (792), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 156/199 (79%), Positives = 176/199 (89%), Gaps = 4/199 (2%)
Query 5 TTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPDLVIM 64
TT+A A +RV++AEDEALIRMDL EML EEGY++VGEAGDGQ+AV+LA H+PDLVIM
Sbjct 10 TTNAGA---KRVVVAEDEALIRMDLVEMLTEEGYQVVGEAGDGQQAVDLAVEHRPDLVIM 66
Query 65 DVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISDLIPA 124
DVKMPRRDGIDAA+EIASKR+AP+V+LTAFSQRDLVERARDAGAMAYLVKPF+ SDL+PA
Sbjct 67 DVKMPRRDGIDAAAEIASKRVAPVVILTAFSQRDLVERARDAGAMAYLVKPFTKSDLVPA 126
Query 125 IELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRAAMDR 184
IELA SRF EITALE EVA L++RLETRKLVERAKG+L G++EP AFKWIQR AMDR
Sbjct 127 IELAASRFHEITALESEVANLADRLETRKLVERAKGVLMQTQGLSEPQAFKWIQRTAMDR 186
Query 185 RTTMKRVAEVVLETLGTPK 203
RTTMK VAEVVLE L PK
Sbjct 187 RTTMKAVAEVVLENLA-PK 204
>gi|312139907|ref|YP_004007243.1| two component system response regulator [Rhodococcus equi 103S]
gi|325674213|ref|ZP_08153902.1| response regulator [Rhodococcus equi ATCC 33707]
gi|311889246|emb|CBH48560.1| two component system response regulator [Rhodococcus equi 103S]
gi|325554893|gb|EGD24566.1| response regulator [Rhodococcus equi ATCC 33707]
Length=208
Score = 306 bits (784), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 152/200 (76%), Positives = 173/200 (87%), Gaps = 0/200 (0%)
Query 1 MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD 60
M P PRRV++AEDE LIR+DL EMLREEGY++VGEAGDGQ AVELAE +PD
Sbjct 3 MNAPAAQGTERRPRRVVVAEDEVLIRLDLVEMLREEGYDVVGEAGDGQRAVELAEELRPD 62
Query 61 LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD 120
LVIMDVKMPRRDGIDAASEIA+KRIAP+V+LTAFSQR+LVERARDAGAMAYLVKPFS SD
Sbjct 63 LVIMDVKMPRRDGIDAASEIAAKRIAPVVILTAFSQRELVERARDAGAMAYLVKPFSKSD 122
Query 121 LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA 180
L+PA+ELA SRF EI+ LE EVA LS+RLETRK++ERAKG+L ++EP+AFKWIQRA
Sbjct 123 LVPAVELAASRFVEISLLEREVANLSDRLETRKVIERAKGMLMQSQNLSEPEAFKWIQRA 182
Query 181 AMDRRTTMKRVAEVVLETLG 200
AMDRRTTMK VAEVVL+TLG
Sbjct 183 AMDRRTTMKAVAEVVLDTLG 202
>gi|343927506|ref|ZP_08766977.1| putative two-component response regulator [Gordonia alkanivorans
NBRC 16433]
gi|343762580|dbj|GAA13903.1| putative two-component response regulator [Gordonia alkanivorans
NBRC 16433]
Length=207
Score = 293 bits (749), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 143/188 (77%), Positives = 169/188 (90%), Gaps = 0/188 (0%)
Query 14 RRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPDLVIMDVKMPRRDG 73
RVL+AED++LIRMDL EMLREEGY++VGEA +GQ AVEL E KPDLVIMD+KMP RDG
Sbjct 19 HRVLVAEDDSLIRMDLIEMLREEGYDVVGEAPNGQVAVELTESLKPDLVIMDIKMPIRDG 78
Query 74 IDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISDLIPAIELAVSRFR 133
IDAA+EIA KR+AP+V+LTAFSQRD +E+ARDAGAMAYLVKPF+ +DL+PAIE+AVSR+
Sbjct 79 IDAATEIAEKRLAPVVMLTAFSQRDFIEKARDAGAMAYLVKPFTKADLVPAIEVAVSRYH 138
Query 134 EITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRAAMDRRTTMKRVAE 193
E+ LE EVAT++ERLETRKLVERAKGLL K G++EP+AFKWIQRAAMDRRTTMK VA+
Sbjct 139 ELKLLEREVATMNERLETRKLVERAKGLLMQKQGLSEPEAFKWIQRAAMDRRTTMKAVAQ 198
Query 194 VVLETLGT 201
VV+ETLGT
Sbjct 199 VVVETLGT 206
>gi|333919142|ref|YP_004492723.1| Response regulator [Amycolicicoccus subflavus DQS3-9A1]
gi|333481363|gb|AEF39923.1| Response regulator [Amycolicicoccus subflavus DQS3-9A1]
Length=232
Score = 291 bits (745), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 146/196 (75%), Positives = 169/196 (87%), Gaps = 0/196 (0%)
Query 5 TTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPDLVIM 64
T ++ A RRVL+AEDE LIR+DL EMLR+EGY++VGEAGDGQ AVELAE PDLVIM
Sbjct 30 TANSSAWPVRRVLVAEDETLIRLDLTEMLRDEGYDVVGEAGDGQRAVELAEDLIPDLVIM 89
Query 65 DVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISDLIPA 124
DVKMP RDGIDAASEIA+KRIAP+V+LTAFSQR+LVERARDAGAMAYLVKPF+ DL+PA
Sbjct 90 DVKMPIRDGIDAASEIAAKRIAPVVILTAFSQRELVERARDAGAMAYLVKPFTQGDLVPA 149
Query 125 IELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRAAMDR 184
IELA SRF E+ ALE EV L++RLETRKL++RAKG L H MTEP+AF+WIQRAAMDR
Sbjct 150 IELATSRFAELKALEKEVGELTDRLETRKLIDRAKGALMNAHSMTEPEAFRWIQRAAMDR 209
Query 185 RTTMKRVAEVVLETLG 200
RTTMK VA+VV++TL
Sbjct 210 RTTMKVVAQVVIDTLA 225
>gi|300787996|ref|YP_003768287.1| two-component system response regulator [Amycolatopsis mediterranei
U32]
gi|299797510|gb|ADJ47885.1| two-component system response regulator [Amycolatopsis mediterranei
U32]
gi|340529572|gb|AEK44777.1| two-component system response regulator [Amycolatopsis mediterranei
S699]
Length=204
Score = 290 bits (742), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 145/204 (72%), Positives = 176/204 (87%), Gaps = 3/204 (1%)
Query 1 MTGPTTDADAA--VP-RRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELH 57
MT T+A+ A VP RRVL+AEDEALIR+DL EMLREEGYE+VGEAGDG++A+ LA
Sbjct 1 MTDQATEANGAATVPQRRVLVAEDEALIRLDLVEMLREEGYEVVGEAGDGEQAISLATDL 60
Query 58 KPDLVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFS 117
KPDLVI+DVKMP+ DGI+AA++I RIAP+V+LTAFSQRDLVERARDAG MAYLVKPF+
Sbjct 61 KPDLVILDVKMPKLDGIEAAAKITGDRIAPVVILTAFSQRDLVERARDAGTMAYLVKPFA 120
Query 118 ISDLIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWI 177
DL+PAIELAVSRF E+ ALE EVA L++RLETRK+++RAKGLL ++ G+TEPDAF+WI
Sbjct 121 KRDLVPAIELAVSRFSELQALEAEVAGLTDRLETRKVIDRAKGLLMSRQGLTEPDAFRWI 180
Query 178 QRAAMDRRTTMKRVAEVVLETLGT 201
QR AMDRRTTMK VAE V+E++G+
Sbjct 181 QRTAMDRRTTMKAVAEAVVESIGS 204
>gi|257056585|ref|YP_003134417.1| response regulator with putative antiterminator output domain-containing
protein [Saccharomonospora viridis DSM 43017]
gi|256586457|gb|ACU97590.1| response regulator with putative antiterminator output domain
protein [Saccharomonospora viridis DSM 43017]
Length=204
Score = 289 bits (739), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 142/196 (73%), Positives = 169/196 (87%), Gaps = 0/196 (0%)
Query 5 TTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPDLVIM 64
T DA A RRVL+AEDEALIR+DL EMLREEGYE+VGEAGDG+EAV+LA KPDLVI+
Sbjct 8 TNDAAPAPQRRVLVAEDEALIRLDLVEMLREEGYEVVGEAGDGEEAVKLASELKPDLVIL 67
Query 65 DVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISDLIPA 124
DVKMP+ DGI+AA++I RIAP+V+LTAFSQR+LVERAR+AG MAYLVKPF+ DL+PA
Sbjct 68 DVKMPKLDGIEAAAKITGDRIAPVVILTAFSQRELVERAREAGTMAYLVKPFAKRDLVPA 127
Query 125 IELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRAAMDR 184
IELAVSRF E+ ALE EVA L+ERLETRKL++RAKGLL T G+TEPDAF+WIQR AMDR
Sbjct 128 IELAVSRFSELQALEAEVAGLNERLETRKLIDRAKGLLMTHQGLTEPDAFRWIQRTAMDR 187
Query 185 RTTMKRVAEVVLETLG 200
RTTMK +A+ V++ +G
Sbjct 188 RTTMKAIAQAVIDNIG 203
>gi|302528128|ref|ZP_07280470.1| two-component system response regulatory protein [Streptomyces
sp. AA4]
gi|302437023|gb|EFL08839.1| two-component system response regulatory protein [Streptomyces
sp. AA4]
Length=204
Score = 287 bits (735), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 143/197 (73%), Positives = 170/197 (87%), Gaps = 1/197 (0%)
Query 5 TTDADAAVP-RRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPDLVI 63
+ A A VP RRVL+AEDEALIR+DL EMLREEGYE+VGEAGDG+EA+ LA KPDLVI
Sbjct 8 SNGAAAGVPQRRVLVAEDEALIRLDLVEMLREEGYEVVGEAGDGEEAIALATDLKPDLVI 67
Query 64 MDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISDLIP 123
+DVKMP+ DGI+AA+ I RIAP+V+LTAFSQRDLVERARDAG MAYLVKPF+ DL+P
Sbjct 68 LDVKMPKLDGIEAAARITGDRIAPVVILTAFSQRDLVERARDAGTMAYLVKPFAKRDLVP 127
Query 124 AIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRAAMD 183
AIELAVSRF E+ ALE EVA L++RLETRK+++RAKGLL ++ G+TEPDAF+WIQR AMD
Sbjct 128 AIELAVSRFSELQALEAEVAGLTDRLETRKVIDRAKGLLMSRQGLTEPDAFRWIQRTAMD 187
Query 184 RRTTMKRVAEVVLETLG 200
RRTTMK VAE V+E++G
Sbjct 188 RRTTMKAVAEAVVESIG 204
>gi|134101938|ref|YP_001107599.1| putative two-component system response regulator [Saccharopolyspora
erythraea NRRL 2338]
gi|291007050|ref|ZP_06565023.1| putative two-component system response regulator [Saccharopolyspora
erythraea NRRL 2338]
gi|133914561|emb|CAM04674.1| putative two-component system response regulator [Saccharopolyspora
erythraea NRRL 2338]
Length=203
Score = 285 bits (728), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 138/189 (74%), Positives = 165/189 (88%), Gaps = 0/189 (0%)
Query 12 VPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPDLVIMDVKMPRR 71
V RRVL+AEDEALIR+DL EMLREEGY++VGEA DGQEAV LA+ +PDLVI+D+KMP+
Sbjct 15 VERRVLVAEDEALIRLDLVEMLREEGYQVVGEAADGQEAVRLADELRPDLVILDIKMPKM 74
Query 72 DGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISDLIPAIELAVSR 131
DGI+AAS IA +RIAP+V+LTAFSQRDLVERARDAGAMAYLVKPF+ DL+PAIELAVSR
Sbjct 75 DGIEAASNIAGERIAPVVILTAFSQRDLVERARDAGAMAYLVKPFAKRDLVPAIELAVSR 134
Query 132 FREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRAAMDRRTTMKRV 191
F E+ ALE EVA L+ERLE RK +ERAKGLL +KH ++EP++F+W+QR AMDRRTTMK V
Sbjct 135 FTEVQALEAEVADLNERLEARKTIERAKGLLMSKHSLSEPESFRWLQRTAMDRRTTMKAV 194
Query 192 AEVVLETLG 200
A+ VL+ L
Sbjct 195 AQAVLDNLS 203
>gi|262202790|ref|YP_003273998.1| response regulator receiver [Gordonia bronchialis DSM 43247]
gi|262086137|gb|ACY22105.1| response regulator receiver [Gordonia bronchialis DSM 43247]
Length=206
Score = 285 bits (728), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 139/191 (73%), Positives = 168/191 (88%), Gaps = 0/191 (0%)
Query 11 AVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPDLVIMDVKMPR 70
A +VL+AED++LIRMDL EMLREEGY++VGEA +GQ AVEL E PDLVIMD+KMP
Sbjct 16 ASAHKVLVAEDDSLIRMDLIEMLREEGYDVVGEAPNGQAAVELTESLGPDLVIMDIKMPI 75
Query 71 RDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISDLIPAIELAVS 130
RDGIDAA+EIA KR+AP+V+LTAFSQRD +E+ARDAGAMAYLVKPF+ +DL+PAIE+AVS
Sbjct 76 RDGIDAATEIAQKRLAPVVMLTAFSQRDFIEKARDAGAMAYLVKPFTKADLVPAIEVAVS 135
Query 131 RFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRAAMDRRTTMKR 190
R++E+ LE EVAT+++RLETRKLVERAKGLL K ++EP+AFKWIQRAAMDRRTTMK
Sbjct 136 RYQELKMLEREVATVNDRLETRKLVERAKGLLMEKQALSEPEAFKWIQRAAMDRRTTMKA 195
Query 191 VAEVVLETLGT 201
VA+VV+ETL T
Sbjct 196 VAQVVVETLAT 206
>gi|256379544|ref|YP_003103204.1| response regulator receiver and ANTAR domain-containing protein
[Actinosynnema mirum DSM 43827]
gi|255923847|gb|ACU39358.1| response regulator receiver and ANTAR domain protein [Actinosynnema
mirum DSM 43827]
Length=200
Score = 283 bits (724), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 141/200 (71%), Positives = 167/200 (84%), Gaps = 0/200 (0%)
Query 1 MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD 60
MT A PRRVL+AEDEALIR+DL EMLREEGYE+ G+A DG EA+ LA+ +PD
Sbjct 1 MTQAAEAQSQAAPRRVLVAEDEALIRLDLVEMLREEGYEVAGQAADGDEAITLAKELRPD 60
Query 61 LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD 120
LVI+DVKMP+ DGI+AAS IA +R+AP+V+LTAFSQRDLVERARDAGAMAYLVKPF+ D
Sbjct 61 LVILDVKMPKVDGIEAASVIAGERVAPVVILTAFSQRDLVERARDAGAMAYLVKPFAKRD 120
Query 121 LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA 180
L+PAIELA+SRF E+ ALE EVA L+ERLETRK+VERAKGLL TK ++EP+AF+W+QR
Sbjct 121 LVPAIELAMSRFSELQALELEVAGLNERLETRKVVERAKGLLMTKQNLSEPEAFRWVQRT 180
Query 181 AMDRRTTMKRVAEVVLETLG 200
AMDRRTTMK VAE V+E G
Sbjct 181 AMDRRTTMKAVAEAVIENFG 200
>gi|72161585|ref|YP_289242.1| response regulator receiver [Thermobifida fusca YX]
gi|71915317|gb|AAZ55219.1| response regulator receiver [Thermobifida fusca YX]
Length=207
Score = 278 bits (711), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 135/186 (73%), Positives = 164/186 (89%), Gaps = 0/186 (0%)
Query 15 RVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPDLVIMDVKMPRRDGI 74
RV+IAEDEALIR+DL EML E+GYE+VGEAGDG+ AV LA +PDLVI+D+KMP DG+
Sbjct 20 RVVIAEDEALIRLDLKEMLEEDGYEVVGEAGDGETAVRLATELRPDLVILDIKMPVLDGL 79
Query 75 DAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISDLIPAIELAVSRFRE 134
AA IA++RIAP+V+LTAFSQRDLVERARDAGAMAYLVKPF+ SDL+PAIE+AVSR+ E
Sbjct 80 SAAERIAAERIAPVVILTAFSQRDLVERARDAGAMAYLVKPFTKSDLVPAIEMAVSRYAE 139
Query 135 ITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRAAMDRRTTMKRVAEV 194
ITALE EV L+ERLETRK+VERAKGLLQ K+G++EP+AF+WIQ+ +MDRR TM++VAE
Sbjct 140 ITALEAEVTGLTERLETRKIVERAKGLLQKKYGLSEPEAFRWIQKNSMDRRLTMRKVAET 199
Query 195 VLETLG 200
V+ETL
Sbjct 200 VVETLS 205
>gi|254387264|ref|ZP_05002525.1| two-component system response regulator [Streptomyces sp. Mg1]
gi|194346070|gb|EDX27036.1| two-component system response regulator [Streptomyces sp. Mg1]
Length=217
Score = 276 bits (705), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 141/200 (71%), Positives = 169/200 (85%), Gaps = 4/200 (2%)
Query 2 TGPTTDADAA-VP---RRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELH 57
+ PT DAD + VP RV+IAEDEALIR+DL EML EEGY +VGEAGDGQ AVELA H
Sbjct 7 STPTPDADQSHVPPLTTRVVIAEDEALIRLDLKEMLEEEGYSVVGEAGDGQTAVELAREH 66
Query 58 KPDLVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFS 117
+PDLVI+DVKMP DGI AA +IA + IAP+++LTAFSQRDLVERARDAGAMAYLVKPFS
Sbjct 67 RPDLVILDVKMPVLDGISAAEKIAEESIAPVLMLTAFSQRDLVERARDAGAMAYLVKPFS 126
Query 118 ISDLIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWI 177
SD++PAIE+AVSRF E+ ALE EVA LS RLETRKLV+RAK +LQT++G+TEP AF+WI
Sbjct 127 KSDVVPAIEMAVSRFAELRALEKEVADLSLRLETRKLVDRAKSILQTQYGLTEPAAFRWI 186
Query 178 QRAAMDRRTTMKRVAEVVLE 197
Q+ +MDRR +M++VAE V+E
Sbjct 187 QKTSMDRRMSMQQVAEAVIE 206
>gi|326382643|ref|ZP_08204334.1| response regulator receiver [Gordonia neofelifaecis NRRL B-59395]
gi|326198762|gb|EGD55945.1| response regulator receiver [Gordonia neofelifaecis NRRL B-59395]
Length=207
Score = 275 bits (703), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 138/199 (70%), Positives = 166/199 (84%), Gaps = 2/199 (1%)
Query 1 MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD 60
M P A A RV++AED++LIRMDL EMLR+EGY++VGEA +GQ AV+LAE PD
Sbjct 6 MNDPGKPASPA--SRVVVAEDDSLIRMDLIEMLRDEGYDVVGEAPNGQVAVDLAEQLHPD 63
Query 61 LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD 120
LVIMDVKMP RDGIDAASEIA KRIAP+V+LTAFSQR+ VERARDAGAMAYLVKPF+ +D
Sbjct 64 LVIMDVKMPVRDGIDAASEIARKRIAPVVMLTAFSQREFVERARDAGAMAYLVKPFTQAD 123
Query 121 LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA 180
L+PAIE+A+SR+RE+ LE E+A +S R E RKL+ERAKGLL K GMTEP+AF+WIQR
Sbjct 124 LVPAIEVALSRYRELKVLEAEIADMSGRFEARKLIERAKGLLMEKQGMTEPEAFRWIQRN 183
Query 181 AMDRRTTMKRVAEVVLETL 199
AMD+R TMK VAE+V++TL
Sbjct 184 AMDKRATMKAVAEIVVDTL 202
>gi|297198977|ref|ZP_06916374.1| two-component system response regulator [Streptomyces sviceus
ATCC 29083]
gi|197711101|gb|EDY55135.1| two-component system response regulator [Streptomyces sviceus
ATCC 29083]
Length=218
Score = 274 bits (701), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 131/182 (72%), Positives = 161/182 (89%), Gaps = 0/182 (0%)
Query 15 RVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPDLVIMDVKMPRRDGI 74
RV+IAEDEALIR+DL EML EEGY +VGEAGDG++A+ELA HKPDLVI+DVKMP+ DGI
Sbjct 26 RVVIAEDEALIRLDLKEMLEEEGYSVVGEAGDGEQAIELAREHKPDLVILDVKMPKLDGI 85
Query 75 DAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISDLIPAIELAVSRFRE 134
AA +IA +RIAP+++LTAFSQRDLVERARDAGAMAYLVKPFS SD++PAIE+AVSRF E
Sbjct 86 SAAEKIAEERIAPVLMLTAFSQRDLVERARDAGAMAYLVKPFSKSDVVPAIEMAVSRFTE 145
Query 135 ITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRAAMDRRTTMKRVAEV 194
+ LE EVA L++RLETRKLV+RAK +LQT +G+TEP AF+WIQ+ +MDRR +M++VAE
Sbjct 146 LKELENEVADLTQRLETRKLVDRAKSILQTSYGLTEPAAFRWIQKTSMDRRMSMQQVAEA 205
Query 195 VL 196
V+
Sbjct 206 VI 207
>gi|331697662|ref|YP_004333901.1| response regulator receiver and ANTAR domain-containing protein
[Pseudonocardia dioxanivorans CB1190]
gi|326952351|gb|AEA26048.1| response regulator receiver and ANTAR domain protein [Pseudonocardia
dioxanivorans CB1190]
Length=209
Score = 274 bits (701), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 137/186 (74%), Positives = 160/186 (87%), Gaps = 0/186 (0%)
Query 15 RVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPDLVIMDVKMPRRDGI 74
RVL+AEDEALIR+DL EML EEGY+I GEAGDG+ AVELA PDLVIMD+KMP++DGI
Sbjct 21 RVLVAEDEALIRLDLTEMLTEEGYQIAGEAGDGEAAVELARSLGPDLVIMDIKMPKKDGI 80
Query 75 DAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISDLIPAIELAVSRFRE 134
+AA I +RIAP+V+LTAFSQRDL+ERARDAGAMAYLVKPF+ +L+PAIELAVSRF E
Sbjct 81 EAAGTIVEERIAPVVMLTAFSQRDLIERARDAGAMAYLVKPFARHELVPAIELAVSRFAE 140
Query 135 ITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRAAMDRRTTMKRVAEV 194
ALE EVATLS+RLETRK+V+RAKGLL +K M+EP+AF+WIQR AMDRRTTMK VAE
Sbjct 141 KKALEDEVATLSDRLETRKVVDRAKGLLMSKQNMSEPEAFRWIQRTAMDRRTTMKAVAEA 200
Query 195 VLETLG 200
V+E L
Sbjct 201 VVEGLA 206
>gi|297194982|ref|ZP_06912380.1| two-component system response regulator [Streptomyces pristinaespiralis
ATCC 25486]
gi|197721905|gb|EDY65813.1| two-component system response regulator [Streptomyces pristinaespiralis
ATCC 25486]
Length=218
Score = 274 bits (701), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 134/183 (74%), Positives = 161/183 (88%), Gaps = 0/183 (0%)
Query 15 RVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPDLVIMDVKMPRRDGI 74
RV+IAEDEALIR+DL EML EEGY +VGEAGDGQ AVELA H+PDLVI+DVKMP DGI
Sbjct 25 RVVIAEDEALIRLDLKEMLEEEGYSVVGEAGDGQRAVELAREHRPDLVILDVKMPVLDGI 84
Query 75 DAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISDLIPAIELAVSRFRE 134
AA +IA + IAP+++LTAFSQRDLVERARDAGAMAYLVKPFS SD++PAIE+AVSRF E
Sbjct 85 SAAEKIAEESIAPVLMLTAFSQRDLVERARDAGAMAYLVKPFSKSDVVPAIEMAVSRFTE 144
Query 135 ITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRAAMDRRTTMKRVAEV 194
+ ALE EVA LS+RLETRKLV+RAK +LQT++G+TEP AF+WIQ+ +MDRR +M++VAE
Sbjct 145 LKALEQEVADLSQRLETRKLVDRAKSILQTQYGLTEPAAFRWIQKTSMDRRLSMQQVAEA 204
Query 195 VLE 197
V+E
Sbjct 205 VIE 207
>gi|271964457|ref|YP_003338653.1| response regulator [Streptosporangium roseum DSM 43021]
gi|270507632|gb|ACZ85910.1| response regulator [Streptosporangium roseum DSM 43021]
Length=199
Score = 274 bits (700), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 138/189 (74%), Positives = 163/189 (87%), Gaps = 2/189 (1%)
Query 14 RRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPDLVIMDVKMPRRDG 73
RRV+IAEDEALIR+DL EML E+GY +VGEAGDG+ AV+LA H+PDLVI+DVKMP DG
Sbjct 5 RRVVIAEDEALIRLDLKEMLEEDGYAVVGEAGDGEAAVKLALEHRPDLVILDVKMPILDG 64
Query 74 IDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISDLIPAIELAVSRFR 133
I AA +I S+RIAP ++LTAFSQRDLVERARDAGAMAYLVKPF+ SDL+PAIE+AVSR
Sbjct 65 ISAAEQIVSQRIAPCLILTAFSQRDLVERARDAGAMAYLVKPFTKSDLVPAIEMAVSRHE 124
Query 134 EITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRAAMDRRTTMKRVAE 193
EI ALE EV TLSERLETRKLVERAKG L +HG +EP AF+WIQ+A+MDRR +M++VA+
Sbjct 125 EIAALEREVGTLSERLETRKLVERAKGRLMEQHGWSEPQAFRWIQKASMDRRLSMRQVAQ 184
Query 194 VVLETLGTP 202
VVL+ GTP
Sbjct 185 VVLD--GTP 191
>gi|297562099|ref|YP_003681073.1| response regulator receiver and ANTAR domain-containing protein
[Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111]
gi|296846547|gb|ADH68567.1| response regulator receiver and ANTAR domain protein [Nocardiopsis
dassonvillei subsp. dassonvillei DSM 43111]
Length=212
Score = 274 bits (700), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 130/186 (70%), Positives = 164/186 (89%), Gaps = 0/186 (0%)
Query 15 RVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPDLVIMDVKMPRRDGI 74
RV+IAEDEALIR+DL EML E+GY +VGEAGDG+ + LA+ KPDLVI D+KMP DG+
Sbjct 24 RVVIAEDEALIRLDLKEMLEEDGYAVVGEAGDGETVIRLAQELKPDLVITDIKMPVLDGL 83
Query 75 DAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISDLIPAIELAVSRFRE 134
AA IA++RIAP+V+LTAFSQR+LVERAR+AGAMAYLVKPF+ +DL+PAIE+A SR+ E
Sbjct 84 SAAERIAAERIAPVVILTAFSQRELVERAREAGAMAYLVKPFNKADLVPAIEMATSRYAE 143
Query 135 ITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRAAMDRRTTMKRVAEV 194
++ALE EV++L ERLETRKLVE+AKGLLQ++HGM+EP+AF+WIQ+ +MDRR TM+RVAE
Sbjct 144 LSALESEVSSLQERLETRKLVEQAKGLLQSRHGMSEPEAFRWIQKNSMDRRLTMRRVAET 203
Query 195 VLETLG 200
V+ETLG
Sbjct 204 VVETLG 209
>gi|328881687|emb|CCA54926.1| putative two-component system response regulator [Streptomyces
venezuelae ATCC 10712]
Length=217
Score = 274 bits (700), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 139/198 (71%), Positives = 169/198 (86%), Gaps = 4/198 (2%)
Query 4 PTTDADAA-VP---RRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKP 59
P DADA+ VP RV+IAEDEALIR+DL EML EEGY +VGEAGDG +AVELA H+P
Sbjct 9 PADDADASHVPPLTTRVVIAEDEALIRLDLKEMLEEEGYTVVGEAGDGAKAVELAREHRP 68
Query 60 DLVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSIS 119
DLVI+DVKMP DGI AA +IA + IAP+++LTAFSQR+LVERARDAGAMAYLVKPFS S
Sbjct 69 DLVILDVKMPVLDGISAAEKIAGESIAPVLMLTAFSQRELVERARDAGAMAYLVKPFSKS 128
Query 120 DLIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQR 179
D++PAIE+AVSRF E+ ALE EVA LS+RLETRKLV+RAK +LQT++G+TEP AF+WIQ+
Sbjct 129 DVVPAIEMAVSRFSELRALEQEVADLSQRLETRKLVDRAKSILQTQYGLTEPAAFRWIQK 188
Query 180 AAMDRRTTMKRVAEVVLE 197
+MDRR +M++VAE V+E
Sbjct 189 TSMDRRMSMQQVAEAVIE 206
>gi|21220495|ref|NP_626274.1| two-component system response regulator [Streptomyces coelicolor
A3(2)]
gi|289772264|ref|ZP_06531642.1| two-component system response regulator [Streptomyces lividans
TK24]
gi|5689906|emb|CAB52069.1| putative two-component system response regulator [Streptomyces
coelicolor A3(2)]
gi|289702463|gb|EFD69892.1| two-component system response regulator [Streptomyces lividans
TK24]
Length=218
Score = 273 bits (698), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 133/183 (73%), Positives = 162/183 (89%), Gaps = 0/183 (0%)
Query 15 RVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPDLVIMDVKMPRRDGI 74
RV+IAEDEALIR+DL EML EEGY +VGEAGDG+EAVELA H+PDLVI+DVKMP+ DGI
Sbjct 26 RVVIAEDEALIRLDLKEMLEEEGYSVVGEAGDGEEAVELAREHRPDLVILDVKMPKMDGI 85
Query 75 DAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISDLIPAIELAVSRFRE 134
AA +IA + IAP+++LTAFSQRDLVERARDAGAMAYLVKPFS SD++PAIE+AVSRF E
Sbjct 86 SAAEKIAEESIAPVLMLTAFSQRDLVERARDAGAMAYLVKPFSKSDVVPAIEMAVSRFTE 145
Query 135 ITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRAAMDRRTTMKRVAEV 194
+ ALE EVA LS RLETRKLV+RAK +LQT++G+TEP AF+WIQ+ +MDRR +M++VAE
Sbjct 146 LKALEKEVADLSLRLETRKLVDRAKSVLQTEYGLTEPAAFRWIQKTSMDRRMSMQQVAEA 205
Query 195 VLE 197
V++
Sbjct 206 VIQ 208
>gi|302533855|ref|ZP_07286197.1| two-component system response regulator [Streptomyces sp. C]
gi|302442750|gb|EFL14566.1| two-component system response regulator [Streptomyces sp. C]
Length=217
Score = 273 bits (698), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 139/200 (70%), Positives = 168/200 (84%), Gaps = 4/200 (2%)
Query 2 TGPTTDADAA-VP---RRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELH 57
+ PT DAD + VP RV+IAEDEALIR+DL EML EEGY +VGEAGDGQ AVELA H
Sbjct 7 STPTPDADQSHVPPLTTRVVIAEDEALIRLDLKEMLEEEGYSVVGEAGDGQTAVELAREH 66
Query 58 KPDLVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFS 117
+PDLVI+DVKMP DGI AA +IA + IAP+++LTAFSQRDLVERARDAGAMAYLVKPFS
Sbjct 67 RPDLVILDVKMPVLDGISAAEKIAGESIAPVLMLTAFSQRDLVERARDAGAMAYLVKPFS 126
Query 118 ISDLIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWI 177
SD++PAIE+AVSRF E+ ALE EVA LS RLETRKLV+RAK +LQT++ ++EP AF+WI
Sbjct 127 KSDVVPAIEMAVSRFAELKALEKEVADLSARLETRKLVDRAKSILQTEYKLSEPAAFRWI 186
Query 178 QRAAMDRRTTMKRVAEVVLE 197
Q+ +MDRR +M++VAE V+E
Sbjct 187 QKTSMDRRMSMQQVAEAVIE 206
>gi|329940869|ref|ZP_08290149.1| two-component system response regulator [Streptomyces griseoaurantiacus
M045]
gi|329300163|gb|EGG44061.1| two-component system response regulator [Streptomyces griseoaurantiacus
M045]
Length=218
Score = 273 bits (697), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 141/208 (68%), Positives = 171/208 (83%), Gaps = 11/208 (5%)
Query 1 MTGPTT--DADAA------VP---RRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQE 49
MT P + ADAA VP RV+IAEDEALIR+DL EML EEGY +VGEAGDG+
Sbjct 1 MTAPESPQSADAADEDTSHVPPSTTRVVIAEDEALIRLDLREMLEEEGYSVVGEAGDGER 60
Query 50 AVELAELHKPDLVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAM 109
AVELA H+PDLVI+DVKMP+ DGI AA IA +RIAP+++LTAFSQRDLVERARDAGAM
Sbjct 61 AVELAREHRPDLVILDVKMPKLDGISAAERIAEERIAPVLMLTAFSQRDLVERARDAGAM 120
Query 110 AYLVKPFSISDLIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMT 169
AYLVKPFS SD++PAIE+AVSRF E+ LE EVA LS+RLETRKLV+RAK +LQT++G+T
Sbjct 121 AYLVKPFSKSDVVPAIEMAVSRFTELKELEKEVADLSQRLETRKLVDRAKSVLQTEYGLT 180
Query 170 EPDAFKWIQRAAMDRRTTMKRVAEVVLE 197
EP AF+WIQ+ +MDRR +M++VAE V++
Sbjct 181 EPAAFRWIQKTSMDRRMSMQQVAEAVIQ 208
Lambda K H
0.318 0.133 0.360
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 229991766768
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40