BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv1626

Length=205
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15841081|ref|NP_336118.1|  response regulator [Mycobacterium t...   403    7e-111
gi|326903239|gb|EGE50172.1|  two component system transcriptional...   403    8e-111
gi|15608764|ref|NP_216142.1|  two-component system transcriptiona...   403    9e-111
gi|289574293|ref|ZP_06454520.1|  two component system transcripti...   401    3e-110
gi|289757728|ref|ZP_06517106.1|  response regulator [Mycobacteriu...   397    4e-109
gi|118463323|ref|YP_882342.1|  response regulator [Mycobacterium ...   376    1e-102
gi|254775608|ref|ZP_05217124.1|  response regulator [Mycobacteriu...   375    2e-102
gi|41407417|ref|NP_960253.1|  hypothetical protein MAP1319 [Mycob...   374    5e-102
gi|118617249|ref|YP_905581.1|  two-component system transcription...   371    3e-101
gi|183982443|ref|YP_001850734.1|  two-component system transcript...   370    5e-101
gi|296164495|ref|ZP_06847066.1|  response regulator [Mycobacteriu...   370    6e-101
gi|289443078|ref|ZP_06432822.1|  response regulator [Mycobacteriu...   369    2e-100
gi|240168004|ref|ZP_04746663.1|  two-component system transcripti...   367    5e-100
gi|342860802|ref|ZP_08717452.1|  response regulator [Mycobacteriu...   367    7e-100
gi|15827661|ref|NP_301924.1|  two-component response regulatory p...   367    7e-100
gi|254820978|ref|ZP_05225979.1|  response regulator [Mycobacteriu...   365    1e-99 
gi|108799987|ref|YP_640184.1|  response regulator receiver/ANTAR ...   347    4e-94 
gi|118469816|ref|YP_887557.1|  response regulator [Mycobacterium ...   346    1e-93 
gi|126435615|ref|YP_001071306.1|  response regulator receiver/ANT...   345    2e-93 
gi|120403824|ref|YP_953653.1|  response regulator receiver/ANTAR ...   337    5e-91 
gi|145224159|ref|YP_001134837.1|  response regulator receiver/ANT...   334    4e-90 
gi|289750171|ref|ZP_06509549.1|  response regulator [Mycobacteriu...   330    7e-89 
gi|169629712|ref|YP_001703361.1|  two-component response regulato...   326    1e-87 
gi|333990761|ref|YP_004523375.1|  two-component system transcript...   324    4e-87 
gi|226306815|ref|YP_002766775.1|  two-component response regulato...   321    5e-86 
gi|229492695|ref|ZP_04386496.1|  response regulator [Rhodococcus ...   320    5e-86 
gi|111018012|ref|YP_700984.1|  response regulator [Rhodococcus jo...   311    4e-83 
gi|226360139|ref|YP_002777917.1|  two-component response regulato...   310    1e-82 
gi|54023838|ref|YP_118080.1|  putative two-component system respo...   309    1e-82 
gi|312139907|ref|YP_004007243.1|  two component system response r...   306    1e-81 
gi|343927506|ref|ZP_08766977.1|  putative two-component response ...   293    1e-77 
gi|333919142|ref|YP_004492723.1|  Response regulator [Amycolicico...   291    4e-77 
gi|300787996|ref|YP_003768287.1|  two-component system response r...   290    8e-77 
gi|257056585|ref|YP_003134417.1|  response regulator with putativ...   289    2e-76 
gi|302528128|ref|ZP_07280470.1|  two-component system response re...   287    5e-76 
gi|134101938|ref|YP_001107599.1|  putative two-component system r...   285    3e-75 
gi|262202790|ref|YP_003273998.1|  response regulator receiver [Go...   285    3e-75 
gi|256379544|ref|YP_003103204.1|  response regulator receiver and...   283    1e-74 
gi|72161585|ref|YP_289242.1|  response regulator receiver [Thermo...   278    4e-73 
gi|254387264|ref|ZP_05002525.1|  two-component system response re...   276    2e-72 
gi|326382643|ref|ZP_08204334.1|  response regulator receiver [Gor...   275    3e-72 
gi|297198977|ref|ZP_06916374.1|  two-component system response re...   274    4e-72 
gi|331697662|ref|YP_004333901.1|  response regulator receiver and...   274    5e-72 
gi|297194982|ref|ZP_06912380.1|  two-component system response re...   274    5e-72 
gi|271964457|ref|YP_003338653.1|  response regulator [Streptospor...   274    6e-72 
gi|297562099|ref|YP_003681073.1|  response regulator receiver and...   274    7e-72 
gi|328881687|emb|CCA54926.1|  putative two-component system respo...   274    7e-72 
gi|21220495|ref|NP_626274.1|  two-component system response regul...   273    1e-71 
gi|302533855|ref|ZP_07286197.1|  two-component system response re...   273    1e-71 
gi|329940869|ref|ZP_08290149.1|  two-component system response re...   273    1e-71 


>gi|15841081|ref|NP_336118.1| response regulator [Mycobacterium tuberculosis CDC1551]
 gi|253799336|ref|YP_003032337.1| two component system transcriptional regulator [Mycobacterium 
tuberculosis KZN 1435]
 gi|254231827|ref|ZP_04925154.1| hypothetical protein TBCG_01579 [Mycobacterium tuberculosis C]
 20 more sequence titles
 Length=208

 Score =  403 bits (1036),  Expect = 7e-111, Method: Compositional matrix adjust.
 Identities = 205/205 (100%), Positives = 205/205 (100%), Gaps = 0/205 (0%)

Query  1    MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD  60
            MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD
Sbjct  4    MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD  63

Query  61   LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD  120
            LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD
Sbjct  64   LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD  123

Query  121  LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA  180
            LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA
Sbjct  124  LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA  183

Query  181  AMDRRTTMKRVAEVVLETLGTPKDT  205
            AMDRRTTMKRVAEVVLETLGTPKDT
Sbjct  184  AMDRRTTMKRVAEVVLETLGTPKDT  208


>gi|326903239|gb|EGE50172.1| two component system transcriptional regulator [Mycobacterium 
tuberculosis W-148]
Length=232

 Score =  403 bits (1036),  Expect = 8e-111, Method: Compositional matrix adjust.
 Identities = 205/205 (100%), Positives = 205/205 (100%), Gaps = 0/205 (0%)

Query  1    MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD  60
            MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD
Sbjct  4    MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD  63

Query  61   LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD  120
            LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD
Sbjct  64   LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD  123

Query  121  LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA  180
            LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA
Sbjct  124  LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA  183

Query  181  AMDRRTTMKRVAEVVLETLGTPKDT  205
            AMDRRTTMKRVAEVVLETLGTPKDT
Sbjct  184  AMDRRTTMKRVAEVVLETLGTPKDT  208


>gi|15608764|ref|NP_216142.1| two-component system transcriptional regulator [Mycobacterium 
tuberculosis H37Rv]
 gi|31792812|ref|NP_855305.1| two-component system transcriptional regulator [Mycobacterium 
bovis AF2122/97]
 gi|121637533|ref|YP_977756.1| putative two-component system transcriptional regulator [Mycobacterium 
bovis BCG str. Pasteur 1173P2]
 48 more sequence titles
 Length=205

 Score =  403 bits (1035),  Expect = 9e-111, Method: Compositional matrix adjust.
 Identities = 205/205 (100%), Positives = 205/205 (100%), Gaps = 0/205 (0%)

Query  1    MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD  60
            MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD
Sbjct  1    MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD  60

Query  61   LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD  120
            LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD
Sbjct  61   LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD  120

Query  121  LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA  180
            LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA
Sbjct  121  LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA  180

Query  181  AMDRRTTMKRVAEVVLETLGTPKDT  205
            AMDRRTTMKRVAEVVLETLGTPKDT
Sbjct  181  AMDRRTTMKRVAEVVLETLGTPKDT  205


>gi|289574293|ref|ZP_06454520.1| two component system transcriptional regulator [Mycobacterium 
tuberculosis K85]
 gi|339631682|ref|YP_004723324.1| two-component system transcriptional regulator [Mycobacterium 
africanum GM041182]
 gi|289538724|gb|EFD43302.1| two component system transcriptional regulator [Mycobacterium 
tuberculosis K85]
 gi|339331038|emb|CCC26710.1| putative two-component system transcriptional regulator [Mycobacterium 
africanum GM041182]
Length=205

 Score =  401 bits (1030),  Expect = 3e-110, Method: Compositional matrix adjust.
 Identities = 204/205 (99%), Positives = 205/205 (100%), Gaps = 0/205 (0%)

Query  1    MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD  60
            MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD
Sbjct  1    MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD  60

Query  61   LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD  120
            LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGA+AYLVKPFSISD
Sbjct  61   LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAIAYLVKPFSISD  120

Query  121  LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA  180
            LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA
Sbjct  121  LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA  180

Query  181  AMDRRTTMKRVAEVVLETLGTPKDT  205
            AMDRRTTMKRVAEVVLETLGTPKDT
Sbjct  181  AMDRRTTMKRVAEVVLETLGTPKDT  205


>gi|289757728|ref|ZP_06517106.1| response regulator [Mycobacterium tuberculosis T85]
 gi|289713292|gb|EFD77304.1| response regulator [Mycobacterium tuberculosis T85]
Length=205

 Score =  397 bits (1021),  Expect = 4e-109, Method: Compositional matrix adjust.
 Identities = 202/202 (100%), Positives = 202/202 (100%), Gaps = 0/202 (0%)

Query  1    MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD  60
            MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD
Sbjct  4    MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD  63

Query  61   LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD  120
            LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD
Sbjct  64   LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD  123

Query  121  LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA  180
            LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA
Sbjct  124  LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA  183

Query  181  AMDRRTTMKRVAEVVLETLGTP  202
            AMDRRTTMKRVAEVVLETLGTP
Sbjct  184  AMDRRTTMKRVAEVVLETLGTP  205


>gi|118463323|ref|YP_882342.1| response regulator [Mycobacterium avium 104]
 gi|118164610|gb|ABK65507.1| response regulator [Mycobacterium avium 104]
 gi|336457769|gb|EGO36763.1| response regulator with putative antiterminator output domain 
protein [Mycobacterium avium subsp. paratuberculosis S397]
Length=207

 Score =  376 bits (965),  Expect = 1e-102, Method: Compositional matrix adjust.
 Identities = 191/204 (94%), Positives = 197/204 (97%), Gaps = 0/204 (0%)

Query  1    MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD  60
            MTGPTTD DAAVPRRVLIAEDEALIR+DLAEMLREEGYEIVGEAGDGQEAVELAE H+PD
Sbjct  4    MTGPTTDTDAAVPRRVLIAEDEALIRLDLAEMLREEGYEIVGEAGDGQEAVELAERHRPD  63

Query  61   LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD  120
            LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPF+ISD
Sbjct  64   LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFTISD  123

Query  121  LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA  180
            LIPAIELAVSRF EI  LE EVATLSERLETRKLVERAKGLLQT+ GMTEP+AFKWIQRA
Sbjct  124  LIPAIELAVSRFSEIAELEREVATLSERLETRKLVERAKGLLQTEQGMTEPEAFKWIQRA  183

Query  181  AMDRRTTMKRVAEVVLETLGTPKD  204
            AMDRRTTMKRVAEVVLETLGTPK+
Sbjct  184  AMDRRTTMKRVAEVVLETLGTPKE  207


>gi|254775608|ref|ZP_05217124.1| response regulator [Mycobacterium avium subsp. avium ATCC 25291]
Length=204

 Score =  375 bits (963),  Expect = 2e-102, Method: Compositional matrix adjust.
 Identities = 191/204 (94%), Positives = 197/204 (97%), Gaps = 0/204 (0%)

Query  1    MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD  60
            MTGPTTD DAAVPRRVLIAEDEALIR+DLAEMLREEGYEIVGEAGDGQEAVELAE H+PD
Sbjct  1    MTGPTTDTDAAVPRRVLIAEDEALIRLDLAEMLREEGYEIVGEAGDGQEAVELAERHRPD  60

Query  61   LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD  120
            LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPF+ISD
Sbjct  61   LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFTISD  120

Query  121  LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA  180
            LIPAIELAVSRF EI  LE EVATLSERLETRKLVERAKGLLQT+ GMTEP+AFKWIQRA
Sbjct  121  LIPAIELAVSRFSEIAELEREVATLSERLETRKLVERAKGLLQTEQGMTEPEAFKWIQRA  180

Query  181  AMDRRTTMKRVAEVVLETLGTPKD  204
            AMDRRTTMKRVAEVVLETLGTPK+
Sbjct  181  AMDRRTTMKRVAEVVLETLGTPKE  204


>gi|41407417|ref|NP_960253.1| hypothetical protein MAP1319 [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|41395769|gb|AAS03636.1| hypothetical protein MAP_1319 [Mycobacterium avium subsp. paratuberculosis 
K-10]
Length=207

 Score =  374 bits (960),  Expect = 5e-102, Method: Compositional matrix adjust.
 Identities = 190/204 (94%), Positives = 196/204 (97%), Gaps = 0/204 (0%)

Query  1    MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD  60
            MTGPTTD DAAVPRRVLIAEDEALIR+DLAEMLREEGYEIVGEAGDGQEAVELAE H+PD
Sbjct  4    MTGPTTDTDAAVPRRVLIAEDEALIRLDLAEMLREEGYEIVGEAGDGQEAVELAERHRPD  63

Query  61   LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD  120
            LVIMDVKMPRRDGIDA SEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPF+ISD
Sbjct  64   LVIMDVKMPRRDGIDATSEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFTISD  123

Query  121  LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA  180
            LIPAIELAVSRF EI  LE EVATLSERLETRKLVERAKGLLQT+ GMTEP+AFKWIQRA
Sbjct  124  LIPAIELAVSRFSEIAELEREVATLSERLETRKLVERAKGLLQTEQGMTEPEAFKWIQRA  183

Query  181  AMDRRTTMKRVAEVVLETLGTPKD  204
            AMDRRTTMKRVAEVVLETLGTPK+
Sbjct  184  AMDRRTTMKRVAEVVLETLGTPKE  207


>gi|118617249|ref|YP_905581.1| two-component system transcriptional regulator [Mycobacterium 
ulcerans Agy99]
 gi|118569359|gb|ABL04110.1| two-component system transcriptional regulator [Mycobacterium 
ulcerans Agy99]
Length=208

 Score =  371 bits (952),  Expect = 3e-101, Method: Compositional matrix adjust.
 Identities = 187/202 (93%), Positives = 195/202 (97%), Gaps = 0/202 (0%)

Query  1    MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD  60
            MTGPTTDADAA  RRVLIAEDEALIRMDLAEMLREEGY+IVGEAGDGQEAVELAELHKPD
Sbjct  4    MTGPTTDADAAKTRRVLIAEDEALIRMDLAEMLREEGYDIVGEAGDGQEAVELAELHKPD  63

Query  61   LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD  120
            LVIMDVKMPRRDGIDAASEIA+KRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPF++SD
Sbjct  64   LVIMDVKMPRRDGIDAASEIATKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFTVSD  123

Query  121  LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA  180
            L+PAIELAVSRF EI+ALE EVATLS+RLETRKLVERAKGLLQ K GMTEP+AFKWIQRA
Sbjct  124  LVPAIELAVSRFSEISALENEVATLSDRLETRKLVERAKGLLQAKQGMTEPEAFKWIQRA  183

Query  181  AMDRRTTMKRVAEVVLETLGTP  202
            AMDRRTTMKRVAEVVLETL TP
Sbjct  184  AMDRRTTMKRVAEVVLETLDTP  205


>gi|183982443|ref|YP_001850734.1| two-component system transcriptional regulator [Mycobacterium 
marinum M]
 gi|183175769|gb|ACC40879.1| two-component system transcriptional regulator [Mycobacterium 
marinum M]
Length=205

 Score =  370 bits (951),  Expect = 5e-101, Method: Compositional matrix adjust.
 Identities = 187/202 (93%), Positives = 195/202 (97%), Gaps = 0/202 (0%)

Query  1    MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD  60
            MTGPTTDADAA  RRVLIAEDEALIRMDLAEMLREEGY+IVGEAGDGQEAVELAELHKPD
Sbjct  1    MTGPTTDADAAKTRRVLIAEDEALIRMDLAEMLREEGYDIVGEAGDGQEAVELAELHKPD  60

Query  61   LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD  120
            LVIMDVKMPRRDGIDAASEIA+KRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPF++SD
Sbjct  61   LVIMDVKMPRRDGIDAASEIATKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFTVSD  120

Query  121  LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA  180
            L+PAIELAVSRF EI+ALE EVATLS+RLETRKLVERAKGLLQ K GMTEP+AFKWIQRA
Sbjct  121  LVPAIELAVSRFSEISALENEVATLSDRLETRKLVERAKGLLQAKQGMTEPEAFKWIQRA  180

Query  181  AMDRRTTMKRVAEVVLETLGTP  202
            AMDRRTTMKRVAEVVLETL TP
Sbjct  181  AMDRRTTMKRVAEVVLETLDTP  202


>gi|296164495|ref|ZP_06847066.1| response regulator [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295900095|gb|EFG79530.1| response regulator [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=207

 Score =  370 bits (950),  Expect = 6e-101, Method: Compositional matrix adjust.
 Identities = 188/200 (94%), Positives = 194/200 (97%), Gaps = 0/200 (0%)

Query  1    MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD  60
            MTGPTTD DAAVPRRVLIAEDEALIR+DLAEMLREEGYEIVGEAGDGQEAVELAE H+PD
Sbjct  4    MTGPTTDTDAAVPRRVLIAEDEALIRLDLAEMLREEGYEIVGEAGDGQEAVELAEQHRPD  63

Query  61   LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD  120
            LVIMDVKMPRRDGIDAASEIA+KRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPF+ISD
Sbjct  64   LVIMDVKMPRRDGIDAASEIAAKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFTISD  123

Query  121  LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA  180
            LIPAIELAVSRF EI+ LE EVATLSERLETRKLVERAKGLLQTK GMTEP+AFKWIQRA
Sbjct  124  LIPAIELAVSRFSEISELEREVATLSERLETRKLVERAKGLLQTKQGMTEPEAFKWIQRA  183

Query  181  AMDRRTTMKRVAEVVLETLG  200
            AMDRRTTMKRVAEVVLETLG
Sbjct  184  AMDRRTTMKRVAEVVLETLG  203


>gi|289443078|ref|ZP_06432822.1| response regulator [Mycobacterium tuberculosis T46]
 gi|289415997|gb|EFD13237.1| response regulator [Mycobacterium tuberculosis T46]
Length=199

 Score =  369 bits (947),  Expect = 2e-100, Method: Compositional matrix adjust.
 Identities = 187/187 (100%), Positives = 187/187 (100%), Gaps = 0/187 (0%)

Query  1    MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD  60
            MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD
Sbjct  4    MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD  63

Query  61   LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD  120
            LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD
Sbjct  64   LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD  123

Query  121  LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA  180
            LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA
Sbjct  124  LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA  183

Query  181  AMDRRTT  187
            AMDRRTT
Sbjct  184  AMDRRTT  190


>gi|240168004|ref|ZP_04746663.1| two-component system transcriptional regulator [Mycobacterium 
kansasii ATCC 12478]
Length=203

 Score =  367 bits (943),  Expect = 5e-100, Method: Compositional matrix adjust.
 Identities = 188/202 (94%), Positives = 192/202 (96%), Gaps = 0/202 (0%)

Query  1    MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD  60
            MTGPTTDADAA P RVLIAEDEALIRMDLAEMLREEGY+IVGEAGDGQEAVELAE HKPD
Sbjct  1    MTGPTTDADAAKPHRVLIAEDEALIRMDLAEMLREEGYDIVGEAGDGQEAVELAERHKPD  60

Query  61   LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD  120
            LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPF+ SD
Sbjct  61   LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFTASD  120

Query  121  LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA  180
            LIPAIELAVSRF EITALE EVA LS+RLETRKLVERAKGLLQ K GMTEP+AFKWIQRA
Sbjct  121  LIPAIELAVSRFSEITALEQEVAALSDRLETRKLVERAKGLLQAKQGMTEPEAFKWIQRA  180

Query  181  AMDRRTTMKRVAEVVLETLGTP  202
            AMDRRTTMKRVAEVVLETL TP
Sbjct  181  AMDRRTTMKRVAEVVLETLDTP  202


>gi|342860802|ref|ZP_08717452.1| response regulator [Mycobacterium colombiense CECT 3035]
 gi|342131826|gb|EGT85083.1| response regulator [Mycobacterium colombiense CECT 3035]
Length=205

 Score =  367 bits (941),  Expect = 7e-100, Method: Compositional matrix adjust.
 Identities = 188/201 (94%), Positives = 193/201 (97%), Gaps = 0/201 (0%)

Query  1    MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD  60
            MTGPTTD DAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAE H+PD
Sbjct  1    MTGPTTDTDAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAEAHRPD  60

Query  61   LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD  120
            LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPF+ISD
Sbjct  61   LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFTISD  120

Query  121  LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA  180
            LIPAIELAVSRF EI  LE EVATLS+RLETRK+VERAKGLLQTK GMTEP+AFKWIQRA
Sbjct  121  LIPAIELAVSRFGEIAELEREVATLSDRLETRKVVERAKGLLQTKQGMTEPEAFKWIQRA  180

Query  181  AMDRRTTMKRVAEVVLETLGT  201
            AMDRRTTMKRVAEVVLETL T
Sbjct  181  AMDRRTTMKRVAEVVLETLDT  201


>gi|15827661|ref|NP_301924.1| two-component response regulatory protein [Mycobacterium leprae 
TN]
 gi|221230138|ref|YP_002503554.1| putative two-component response regulatory protein [Mycobacterium 
leprae Br4923]
 gi|13093212|emb|CAC31667.1| possible two-component response regulatory protein [Mycobacterium 
leprae]
 gi|219933245|emb|CAR71381.1| possible two-component response regulatory protein [Mycobacterium 
leprae Br4923]
Length=205

 Score =  367 bits (941),  Expect = 7e-100, Method: Compositional matrix adjust.
 Identities = 186/205 (91%), Positives = 195/205 (96%), Gaps = 0/205 (0%)

Query  1    MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD  60
            MTGPTTDADAA P RVLIAEDEALIR+DLAEMLR+EGY+IVGEA DGQEAVELAE HKPD
Sbjct  1    MTGPTTDADAATPHRVLIAEDEALIRLDLAEMLRDEGYDIVGEAADGQEAVELAERHKPD  60

Query  61   LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD  120
            LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPF+ISD
Sbjct  61   LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFTISD  120

Query  121  LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA  180
            LIPAI LA+SRF E+TALE EVATL++RLETRKLVERAKGLLQ K GMTEP+AFKWIQRA
Sbjct  121  LIPAIALAMSRFSELTALEREVATLADRLETRKLVERAKGLLQVKQGMTEPEAFKWIQRA  180

Query  181  AMDRRTTMKRVAEVVLETLGTPKDT  205
            AMDRRTTMKRVAEVVLETL TPKDT
Sbjct  181  AMDRRTTMKRVAEVVLETLDTPKDT  205


>gi|254820978|ref|ZP_05225979.1| response regulator [Mycobacterium intracellulare ATCC 13950]
Length=204

 Score =  365 bits (938),  Expect = 1e-99, Method: Compositional matrix adjust.
 Identities = 187/204 (92%), Positives = 195/204 (96%), Gaps = 0/204 (0%)

Query  1    MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD  60
            MTGPTTD DAAVPRRVLIAEDEALIR+DLAEMLREEGYEIVGEAGDGQEAVELAE H+PD
Sbjct  1    MTGPTTDTDAAVPRRVLIAEDEALIRLDLAEMLREEGYEIVGEAGDGQEAVELAERHRPD  60

Query  61   LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD  120
            LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPF+ISD
Sbjct  61   LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFTISD  120

Query  121  LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA  180
            LIPAIELAVSRF EI  LE EVA+LS+RLETRKLVERAKGLLQT+ GMTEP+AFKWIQRA
Sbjct  121  LIPAIELAVSRFGEIAELEREVASLSDRLETRKLVERAKGLLQTEQGMTEPEAFKWIQRA  180

Query  181  AMDRRTTMKRVAEVVLETLGTPKD  204
            AMDRRTTMKRVAEVVLETL  PK+
Sbjct  181  AMDRRTTMKRVAEVVLETLDPPKE  204


>gi|108799987|ref|YP_640184.1| response regulator receiver/ANTAR domain-containing protein [Mycobacterium 
sp. MCS]
 gi|119869099|ref|YP_939051.1| response regulator receiver/ANTAR domain-containing protein [Mycobacterium 
sp. KMS]
 gi|108770406|gb|ABG09128.1| response regulator receiver and ANTAR domain protein [Mycobacterium 
sp. MCS]
 gi|119695188|gb|ABL92261.1| response regulator receiver and ANTAR domain protein [Mycobacterium 
sp. KMS]
Length=210

 Score =  347 bits (891),  Expect = 4e-94, Method: Compositional matrix adjust.
 Identities = 179/203 (89%), Positives = 188/203 (93%), Gaps = 2/203 (0%)

Query  1    MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD  60
            MTG  TDA    PRRVLIAEDEALIRMDLAEMLR+EGYEIVGEAGDGQEAVELAE  +PD
Sbjct  4    MTGSPTDA--PTPRRVLIAEDEALIRMDLAEMLRDEGYEIVGEAGDGQEAVELAEQLRPD  61

Query  61   LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD  120
            LVIMDVKMPRRDGIDAASEIASKRIAPIV+LTAFSQRDLVERARDAGAMAYLVKPF+++D
Sbjct  62   LVIMDVKMPRRDGIDAASEIASKRIAPIVILTAFSQRDLVERARDAGAMAYLVKPFNVND  121

Query  121  LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA  180
            LIPAIE+AVSRF EI ALE EVATLS+RLETRKLVERAKGLLQ   GMTEP+AFKWIQRA
Sbjct  122  LIPAIEVAVSRFSEIHALEQEVATLSDRLETRKLVERAKGLLQANQGMTEPEAFKWIQRA  181

Query  181  AMDRRTTMKRVAEVVLETLGTPK  203
            AMDRRTTMKRVAEVVLETL TPK
Sbjct  182  AMDRRTTMKRVAEVVLETLDTPK  204


>gi|118469816|ref|YP_887557.1| response regulator [Mycobacterium smegmatis str. MC2 155]
 gi|118171103|gb|ABK71999.1| response regulator [Mycobacterium smegmatis str. MC2 155]
Length=208

 Score =  346 bits (888),  Expect = 1e-93, Method: Compositional matrix adjust.
 Identities = 177/203 (88%), Positives = 190/203 (94%), Gaps = 2/203 (0%)

Query  1    MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD  60
            MTG TTDAD   PRRVLIAEDEALIR+DLAEMLREEGYE+VGEAGDGQEAVE+AE  +PD
Sbjct  1    MTGSTTDADR--PRRVLIAEDEALIRLDLAEMLREEGYEVVGEAGDGQEAVEMAESLRPD  58

Query  61   LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD  120
            LVIMDVKMPRRDGIDAASEIASKRIAPIV+LTAFSQR+LVERARDAGAMAYLVKPF+I+D
Sbjct  59   LVIMDVKMPRRDGIDAASEIASKRIAPIVILTAFSQRELVERARDAGAMAYLVKPFNIND  118

Query  121  LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA  180
            L+PAIE+AVSRF E++ALE EVATLSERLETRKLVERAKGLLQ KH MTEP+AFKWIQRA
Sbjct  119  LVPAIEVAVSRFAELSALETEVATLSERLETRKLVERAKGLLQAKHKMTEPEAFKWIQRA  178

Query  181  AMDRRTTMKRVAEVVLETLGTPK  203
            AMDRRTTMKRVAEVVLETL   K
Sbjct  179  AMDRRTTMKRVAEVVLETLDDTK  201


>gi|126435615|ref|YP_001071306.1| response regulator receiver/ANTAR domain-containing protein [Mycobacterium 
sp. JLS]
 gi|126235415|gb|ABN98815.1| response regulator receiver and ANTAR domain protein [Mycobacterium 
sp. JLS]
Length=210

 Score =  345 bits (886),  Expect = 2e-93, Method: Compositional matrix adjust.
 Identities = 178/203 (88%), Positives = 187/203 (93%), Gaps = 2/203 (0%)

Query  1    MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD  60
            MTG  TDA    PRRVLIAEDEALIRMDLAEMLR+EGYEIVGEAGDGQEAVELAE  +PD
Sbjct  4    MTGSPTDA--PTPRRVLIAEDEALIRMDLAEMLRDEGYEIVGEAGDGQEAVELAEQLRPD  61

Query  61   LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD  120
            LVIMDVKMPRRDGIDAASEIASKRIAPIV+LTAFSQRDLVERARDAGAMAYLVKPF+++D
Sbjct  62   LVIMDVKMPRRDGIDAASEIASKRIAPIVILTAFSQRDLVERARDAGAMAYLVKPFNVND  121

Query  121  LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA  180
            LIPAIE+AVSRF EI ALE EVATLS+RLETRKLVERAKGLLQ   GMTEP+AFKWIQRA
Sbjct  122  LIPAIEVAVSRFSEIHALEQEVATLSDRLETRKLVERAKGLLQANQGMTEPEAFKWIQRA  181

Query  181  AMDRRTTMKRVAEVVLETLGTPK  203
            AMDRRTTMKRVAEVVLETL  PK
Sbjct  182  AMDRRTTMKRVAEVVLETLDAPK  204


>gi|120403824|ref|YP_953653.1| response regulator receiver/ANTAR domain-containing protein [Mycobacterium 
vanbaalenii PYR-1]
 gi|119956642|gb|ABM13647.1| response regulator receiver and ANTAR domain protein [Mycobacterium 
vanbaalenii PYR-1]
Length=213

 Score =  337 bits (865),  Expect = 5e-91, Method: Compositional matrix adjust.
 Identities = 171/193 (89%), Positives = 182/193 (95%), Gaps = 0/193 (0%)

Query  13   PRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPDLVIMDVKMPRRD  72
            PRRVL+AEDEALIR+DLAEMLREEGYEIVGEAGDGQEAVELAE  +PDLVIMDVKMPRRD
Sbjct  15   PRRVLVAEDEALIRLDLAEMLREEGYEIVGEAGDGQEAVELAEALRPDLVIMDVKMPRRD  74

Query  73   GIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISDLIPAIELAVSRF  132
            GIDAASEIASKRIAPIV+LTAFSQR+LVERARDAGAMAYLVKPFSI+DLIPAIE+AVSRF
Sbjct  75   GIDAASEIASKRIAPIVILTAFSQRELVERARDAGAMAYLVKPFSITDLIPAIEVAVSRF  134

Query  133  REITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRAAMDRRTTMKRVA  192
             E+T LE EVA LS+RLETRKLVERAKGLLQ K GM+EP+AFKWIQRAAMDRRTTMKRVA
Sbjct  135  SEMTELEKEVANLSDRLETRKLVERAKGLLQAKQGMSEPEAFKWIQRAAMDRRTTMKRVA  194

Query  193  EVVLETLGTPKDT  205
            EVVLETL  P DT
Sbjct  195  EVVLETLDPPADT  207


>gi|145224159|ref|YP_001134837.1| response regulator receiver/ANTAR domain-containing protein [Mycobacterium 
gilvum PYR-GCK]
 gi|315444494|ref|YP_004077373.1| response regulator with antiterminator output domain [Mycobacterium 
sp. Spyr1]
 gi|145216645|gb|ABP46049.1| response regulator receiver and ANTAR domain protein [Mycobacterium 
gilvum PYR-GCK]
 gi|315262797|gb|ADT99538.1| response regulator with putative antiterminator output domain 
[Mycobacterium sp. Spyr1]
Length=229

 Score =  334 bits (857),  Expect = 4e-90, Method: Compositional matrix adjust.
 Identities = 171/190 (90%), Positives = 179/190 (95%), Gaps = 0/190 (0%)

Query  13   PRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPDLVIMDVKMPRRD  72
            P RVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAV+LAE  +PDLVIMDVKMPRRD
Sbjct  31   PHRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVDLAESLRPDLVIMDVKMPRRD  90

Query  73   GIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISDLIPAIELAVSRF  132
            GIDAASEIASKRIAPIV+LTAFSQR+LVERARDAGAMAYLVKPFSI+DLIPAIE+AVSRF
Sbjct  91   GIDAASEIASKRIAPIVILTAFSQRELVERARDAGAMAYLVKPFSITDLIPAIEVAVSRF  150

Query  133  REITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRAAMDRRTTMKRVA  192
             EI  LE EVATLS+RLETRKLVERAKGLLQ K GMTEP+AFKWIQRAAMDRRTTMKRVA
Sbjct  151  SEIAELEKEVATLSDRLETRKLVERAKGLLQAKQGMTEPEAFKWIQRAAMDRRTTMKRVA  210

Query  193  EVVLETLGTP  202
            EVVLETL  P
Sbjct  211  EVVLETLDPP  220


>gi|289750171|ref|ZP_06509549.1| response regulator [Mycobacterium tuberculosis T92]
 gi|289690758|gb|EFD58187.1| response regulator [Mycobacterium tuberculosis T92]
Length=178

 Score =  330 bits (846),  Expect = 7e-89, Method: Compositional matrix adjust.
 Identities = 170/175 (98%), Positives = 171/175 (98%), Gaps = 0/175 (0%)

Query  1    MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD  60
            MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD
Sbjct  4    MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD  63

Query  61   LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD  120
            LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD
Sbjct  64   LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD  123

Query  121  LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFK  175
            LIPAIELAVSRFREITALEGEVATLSER +  KLVERAKGLLQTKH MTEPDAFK
Sbjct  124  LIPAIELAVSRFREITALEGEVATLSERWKPGKLVERAKGLLQTKHEMTEPDAFK  178


>gi|169629712|ref|YP_001703361.1| two-component response regulatory protein [Mycobacterium abscessus 
ATCC 19977]
 gi|169241679|emb|CAM62707.1| Possible two-component response regulatory protein [Mycobacterium 
abscessus]
Length=205

 Score =  326 bits (835),  Expect = 1e-87, Method: Compositional matrix adjust.
 Identities = 164/201 (82%), Positives = 183/201 (92%), Gaps = 0/201 (0%)

Query  1    MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD  60
            MTGP     AA  RRVL+AEDEALIR+DL EML EEGY++VG+AGDGQEAV+LAE  KPD
Sbjct  1    MTGPQNTEPAAPARRVLVAEDEALIRLDLVEMLHEEGYDVVGQAGDGQEAVDLAEELKPD  60

Query  61   LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD  120
            LVIMDVKMPRRDGIDAASEIA+KRIAPIV+LTAFSQRDLVE+ARDAGAMAYLVKPFS +D
Sbjct  61   LVIMDVKMPRRDGIDAASEIATKRIAPIVILTAFSQRDLVEKARDAGAMAYLVKPFSKTD  120

Query  121  LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA  180
            L+PAIE+AVSRF E+TALE EV TL++RLETRKLVERAKG+LQ+  G+TEP+AFKWIQRA
Sbjct  121  LVPAIEVAVSRFGELTALEKEVQTLADRLETRKLVERAKGVLQSTQGLTEPEAFKWIQRA  180

Query  181  AMDRRTTMKRVAEVVLETLGT  201
            AMDRRTTMKRVAEVVLETL T
Sbjct  181  AMDRRTTMKRVAEVVLETLDT  201


>gi|333990761|ref|YP_004523375.1| two-component system transcriptional regulator [Mycobacterium 
sp. JDM601]
 gi|333486729|gb|AEF36121.1| two-component system transcriptional regulator [Mycobacterium 
sp. JDM601]
Length=207

 Score =  324 bits (831),  Expect = 4e-87, Method: Compositional matrix adjust.
 Identities = 164/201 (82%), Positives = 184/201 (92%), Gaps = 0/201 (0%)

Query  1    MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD  60
            MT  T++      RRVLIAEDEALIR+DLAEMLRE+GYE+VGEAGDGQEAVELAEL +PD
Sbjct  1    MTASTSEGAPRPARRVLIAEDEALIRLDLAEMLREQGYEVVGEAGDGQEAVELAELLRPD  60

Query  61   LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD  120
            LVI+DVKMPRRDGIDAASEIA KRIAPIV+LTAFSQRDLVERARDAGAMAYLVKPFS  D
Sbjct  61   LVIIDVKMPRRDGIDAASEIAGKRIAPIVMLTAFSQRDLVERARDAGAMAYLVKPFSAGD  120

Query  121  LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA  180
            L+PAIELAVSR  EITALE EV++LSE+LETRKL+ERAKGLLQ+K G++EPDAF+WIQRA
Sbjct  121  LVPAIELAVSRSEEITALEREVSSLSEQLETRKLIERAKGLLQSKQGLSEPDAFRWIQRA  180

Query  181  AMDRRTTMKRVAEVVLETLGT  201
            AMD+RTTM++VAEVVLETL T
Sbjct  181  AMDKRTTMRQVAEVVLETLDT  201


>gi|226306815|ref|YP_002766775.1| two-component response regulator [Rhodococcus erythropolis PR4]
 gi|226185932|dbj|BAH34036.1| putative two-component response regulator [Rhodococcus erythropolis 
PR4]
Length=208

 Score =  321 bits (822),  Expect = 5e-86, Method: Compositional matrix adjust.
 Identities = 159/204 (78%), Positives = 179/204 (88%), Gaps = 0/204 (0%)

Query  1    MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD  60
            M  P    +   PRRV++AEDEALIRMDL EMLREEGY++VGEAGDGQ AVELAE  KPD
Sbjct  4    MNSPQPQGNQLAPRRVVVAEDEALIRMDLVEMLREEGYDVVGEAGDGQVAVELAESLKPD  63

Query  61   LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD  120
            LVIMDVKMPRRDGIDAASEIA+KRIAP+V+LTAFSQR+LVERARDAGAMAYLVKPFSISD
Sbjct  64   LVIMDVKMPRRDGIDAASEIAAKRIAPVVILTAFSQRELVERARDAGAMAYLVKPFSISD  123

Query  121  LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA  180
            L+PA+ELAVSRFRE+TALE EVA LS+RLE RKL+ERAK +L  +  +TEP+AFKWIQRA
Sbjct  124  LVPAVELAVSRFREVTALEREVADLSDRLEARKLIERAKSVLMVRQALTEPEAFKWIQRA  183

Query  181  AMDRRTTMKRVAEVVLETLGTPKD  204
            AMDRR+TMK VA+VVLETLG   D
Sbjct  184  AMDRRSTMKAVAQVVLETLGGEPD  207


>gi|229492695|ref|ZP_04386496.1| response regulator [Rhodococcus erythropolis SK121]
 gi|229320354|gb|EEN86174.1| response regulator [Rhodococcus erythropolis SK121]
Length=205

 Score =  320 bits (821),  Expect = 5e-86, Method: Compositional matrix adjust.
 Identities = 159/204 (78%), Positives = 179/204 (88%), Gaps = 0/204 (0%)

Query  1    MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD  60
            M  P    +   PRRV++AEDEALIRMDL EMLREEGY++VGEAGDGQ AVELAE  KPD
Sbjct  1    MNSPQPQGNQLAPRRVVVAEDEALIRMDLVEMLREEGYDVVGEAGDGQVAVELAESLKPD  60

Query  61   LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD  120
            LVIMDVKMPRRDGIDAASEIA+KRIAP+V+LTAFSQR+LVERARDAGAMAYLVKPFSISD
Sbjct  61   LVIMDVKMPRRDGIDAASEIAAKRIAPVVILTAFSQRELVERARDAGAMAYLVKPFSISD  120

Query  121  LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA  180
            L+PA+ELAVSRFRE+TALE EVA LS+RLE RKL+ERAK +L  +  +TEP+AFKWIQRA
Sbjct  121  LVPAVELAVSRFREVTALEREVADLSDRLEARKLIERAKSVLMVRQALTEPEAFKWIQRA  180

Query  181  AMDRRTTMKRVAEVVLETLGTPKD  204
            AMDRR+TMK VA+VVLETLG   D
Sbjct  181  AMDRRSTMKAVAQVVLETLGGEPD  204


>gi|111018012|ref|YP_700984.1| response regulator [Rhodococcus jostii RHA1]
 gi|110817542|gb|ABG92826.1| possible response regulator [Rhodococcus jostii RHA1]
Length=206

 Score =  311 bits (796),  Expect = 4e-83, Method: Compositional matrix adjust.
 Identities = 153/200 (77%), Positives = 177/200 (89%), Gaps = 0/200 (0%)

Query  1    MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD  60
            M  P      + PRRV++AEDEALIR+DL EMLREEGY++VGEAGDGQ AV+LA   KPD
Sbjct  1    MNAPQQQGVPSQPRRVVVAEDEALIRLDLVEMLREEGYDVVGEAGDGQAAVDLAVELKPD  60

Query  61   LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD  120
            LVIMDVKMPRRDGIDAASEIA+KRIAP+V+LTAFSQR+LVERARDAGAMAYLVKPFS +D
Sbjct  61   LVIMDVKMPRRDGIDAASEIAAKRIAPVVILTAFSQRELVERARDAGAMAYLVKPFSTAD  120

Query  121  LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA  180
            L+PA+ELA SRF+E+TALE E++ LSERLETRK+VERAKG+L  K  +TEP+AFKWIQRA
Sbjct  121  LVPAVELAASRFKEVTALEREISDLSERLETRKIVERAKGVLMEKQSLTEPEAFKWIQRA  180

Query  181  AMDRRTTMKRVAEVVLETLG  200
            AMDRR+TMK VA+VVLETLG
Sbjct  181  AMDRRSTMKAVAQVVLETLG  200


>gi|226360139|ref|YP_002777917.1| two-component response regulator [Rhodococcus opacus B4]
 gi|226238624|dbj|BAH48972.1| putative two-component response regulator [Rhodococcus opacus 
B4]
Length=209

 Score =  310 bits (793),  Expect = 1e-82, Method: Compositional matrix adjust.
 Identities = 152/200 (76%), Positives = 177/200 (89%), Gaps = 0/200 (0%)

Query  1    MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD  60
            M  P      +  RRV++AEDEALIR+DL EMLREEGY++VGEAGDGQ AV+LA   KPD
Sbjct  4    MNAPQQQGVPSQARRVVVAEDEALIRLDLVEMLREEGYDVVGEAGDGQAAVDLAVELKPD  63

Query  61   LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD  120
            LVIMDVKMPRRDGIDAASEIA+KRIAP+V+LTAFSQR+LVERARDAGAMAYLVKPFS++D
Sbjct  64   LVIMDVKMPRRDGIDAASEIAAKRIAPVVILTAFSQRELVERARDAGAMAYLVKPFSVAD  123

Query  121  LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA  180
            L+PA+ELA SRF+E+TALE E++ LSERLETRK+VERAKG+L  K  +TEP+AFKWIQRA
Sbjct  124  LVPAVELAASRFKEVTALEREISDLSERLETRKIVERAKGVLMDKQSLTEPEAFKWIQRA  183

Query  181  AMDRRTTMKRVAEVVLETLG  200
            AMDRR+TMK VA+VVLETLG
Sbjct  184  AMDRRSTMKAVAQVVLETLG  203


>gi|54023838|ref|YP_118080.1| putative two-component system response regulator [Nocardia farcinica 
IFM 10152]
 gi|54015346|dbj|BAD56716.1| putative two-component system response regulator [Nocardia farcinica 
IFM 10152]
Length=204

 Score =  309 bits (792),  Expect = 1e-82, Method: Compositional matrix adjust.
 Identities = 156/199 (79%), Positives = 176/199 (89%), Gaps = 4/199 (2%)

Query  5    TTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPDLVIM  64
            TT+A A   +RV++AEDEALIRMDL EML EEGY++VGEAGDGQ+AV+LA  H+PDLVIM
Sbjct  10   TTNAGA---KRVVVAEDEALIRMDLVEMLTEEGYQVVGEAGDGQQAVDLAVEHRPDLVIM  66

Query  65   DVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISDLIPA  124
            DVKMPRRDGIDAA+EIASKR+AP+V+LTAFSQRDLVERARDAGAMAYLVKPF+ SDL+PA
Sbjct  67   DVKMPRRDGIDAAAEIASKRVAPVVILTAFSQRDLVERARDAGAMAYLVKPFTKSDLVPA  126

Query  125  IELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRAAMDR  184
            IELA SRF EITALE EVA L++RLETRKLVERAKG+L    G++EP AFKWIQR AMDR
Sbjct  127  IELAASRFHEITALESEVANLADRLETRKLVERAKGVLMQTQGLSEPQAFKWIQRTAMDR  186

Query  185  RTTMKRVAEVVLETLGTPK  203
            RTTMK VAEVVLE L  PK
Sbjct  187  RTTMKAVAEVVLENLA-PK  204


>gi|312139907|ref|YP_004007243.1| two component system response regulator [Rhodococcus equi 103S]
 gi|325674213|ref|ZP_08153902.1| response regulator [Rhodococcus equi ATCC 33707]
 gi|311889246|emb|CBH48560.1| two component system response regulator [Rhodococcus equi 103S]
 gi|325554893|gb|EGD24566.1| response regulator [Rhodococcus equi ATCC 33707]
Length=208

 Score =  306 bits (784),  Expect = 1e-81, Method: Compositional matrix adjust.
 Identities = 152/200 (76%), Positives = 173/200 (87%), Gaps = 0/200 (0%)

Query  1    MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD  60
            M  P        PRRV++AEDE LIR+DL EMLREEGY++VGEAGDGQ AVELAE  +PD
Sbjct  3    MNAPAAQGTERRPRRVVVAEDEVLIRLDLVEMLREEGYDVVGEAGDGQRAVELAEELRPD  62

Query  61   LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD  120
            LVIMDVKMPRRDGIDAASEIA+KRIAP+V+LTAFSQR+LVERARDAGAMAYLVKPFS SD
Sbjct  63   LVIMDVKMPRRDGIDAASEIAAKRIAPVVILTAFSQRELVERARDAGAMAYLVKPFSKSD  122

Query  121  LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA  180
            L+PA+ELA SRF EI+ LE EVA LS+RLETRK++ERAKG+L     ++EP+AFKWIQRA
Sbjct  123  LVPAVELAASRFVEISLLEREVANLSDRLETRKVIERAKGMLMQSQNLSEPEAFKWIQRA  182

Query  181  AMDRRTTMKRVAEVVLETLG  200
            AMDRRTTMK VAEVVL+TLG
Sbjct  183  AMDRRTTMKAVAEVVLDTLG  202


>gi|343927506|ref|ZP_08766977.1| putative two-component response regulator [Gordonia alkanivorans 
NBRC 16433]
 gi|343762580|dbj|GAA13903.1| putative two-component response regulator [Gordonia alkanivorans 
NBRC 16433]
Length=207

 Score =  293 bits (749),  Expect = 1e-77, Method: Compositional matrix adjust.
 Identities = 143/188 (77%), Positives = 169/188 (90%), Gaps = 0/188 (0%)

Query  14   RRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPDLVIMDVKMPRRDG  73
             RVL+AED++LIRMDL EMLREEGY++VGEA +GQ AVEL E  KPDLVIMD+KMP RDG
Sbjct  19   HRVLVAEDDSLIRMDLIEMLREEGYDVVGEAPNGQVAVELTESLKPDLVIMDIKMPIRDG  78

Query  74   IDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISDLIPAIELAVSRFR  133
            IDAA+EIA KR+AP+V+LTAFSQRD +E+ARDAGAMAYLVKPF+ +DL+PAIE+AVSR+ 
Sbjct  79   IDAATEIAEKRLAPVVMLTAFSQRDFIEKARDAGAMAYLVKPFTKADLVPAIEVAVSRYH  138

Query  134  EITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRAAMDRRTTMKRVAE  193
            E+  LE EVAT++ERLETRKLVERAKGLL  K G++EP+AFKWIQRAAMDRRTTMK VA+
Sbjct  139  ELKLLEREVATMNERLETRKLVERAKGLLMQKQGLSEPEAFKWIQRAAMDRRTTMKAVAQ  198

Query  194  VVLETLGT  201
            VV+ETLGT
Sbjct  199  VVVETLGT  206


>gi|333919142|ref|YP_004492723.1| Response regulator [Amycolicicoccus subflavus DQS3-9A1]
 gi|333481363|gb|AEF39923.1| Response regulator [Amycolicicoccus subflavus DQS3-9A1]
Length=232

 Score =  291 bits (745),  Expect = 4e-77, Method: Compositional matrix adjust.
 Identities = 146/196 (75%), Positives = 169/196 (87%), Gaps = 0/196 (0%)

Query  5    TTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPDLVIM  64
            T ++ A   RRVL+AEDE LIR+DL EMLR+EGY++VGEAGDGQ AVELAE   PDLVIM
Sbjct  30   TANSSAWPVRRVLVAEDETLIRLDLTEMLRDEGYDVVGEAGDGQRAVELAEDLIPDLVIM  89

Query  65   DVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISDLIPA  124
            DVKMP RDGIDAASEIA+KRIAP+V+LTAFSQR+LVERARDAGAMAYLVKPF+  DL+PA
Sbjct  90   DVKMPIRDGIDAASEIAAKRIAPVVILTAFSQRELVERARDAGAMAYLVKPFTQGDLVPA  149

Query  125  IELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRAAMDR  184
            IELA SRF E+ ALE EV  L++RLETRKL++RAKG L   H MTEP+AF+WIQRAAMDR
Sbjct  150  IELATSRFAELKALEKEVGELTDRLETRKLIDRAKGALMNAHSMTEPEAFRWIQRAAMDR  209

Query  185  RTTMKRVAEVVLETLG  200
            RTTMK VA+VV++TL 
Sbjct  210  RTTMKVVAQVVIDTLA  225


>gi|300787996|ref|YP_003768287.1| two-component system response regulator [Amycolatopsis mediterranei 
U32]
 gi|299797510|gb|ADJ47885.1| two-component system response regulator [Amycolatopsis mediterranei 
U32]
 gi|340529572|gb|AEK44777.1| two-component system response regulator [Amycolatopsis mediterranei 
S699]
Length=204

 Score =  290 bits (742),  Expect = 8e-77, Method: Compositional matrix adjust.
 Identities = 145/204 (72%), Positives = 176/204 (87%), Gaps = 3/204 (1%)

Query  1    MTGPTTDADAA--VP-RRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELH  57
            MT   T+A+ A  VP RRVL+AEDEALIR+DL EMLREEGYE+VGEAGDG++A+ LA   
Sbjct  1    MTDQATEANGAATVPQRRVLVAEDEALIRLDLVEMLREEGYEVVGEAGDGEQAISLATDL  60

Query  58   KPDLVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFS  117
            KPDLVI+DVKMP+ DGI+AA++I   RIAP+V+LTAFSQRDLVERARDAG MAYLVKPF+
Sbjct  61   KPDLVILDVKMPKLDGIEAAAKITGDRIAPVVILTAFSQRDLVERARDAGTMAYLVKPFA  120

Query  118  ISDLIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWI  177
              DL+PAIELAVSRF E+ ALE EVA L++RLETRK+++RAKGLL ++ G+TEPDAF+WI
Sbjct  121  KRDLVPAIELAVSRFSELQALEAEVAGLTDRLETRKVIDRAKGLLMSRQGLTEPDAFRWI  180

Query  178  QRAAMDRRTTMKRVAEVVLETLGT  201
            QR AMDRRTTMK VAE V+E++G+
Sbjct  181  QRTAMDRRTTMKAVAEAVVESIGS  204


>gi|257056585|ref|YP_003134417.1| response regulator with putative antiterminator output domain-containing 
protein [Saccharomonospora viridis DSM 43017]
 gi|256586457|gb|ACU97590.1| response regulator with putative antiterminator output domain 
protein [Saccharomonospora viridis DSM 43017]
Length=204

 Score =  289 bits (739),  Expect = 2e-76, Method: Compositional matrix adjust.
 Identities = 142/196 (73%), Positives = 169/196 (87%), Gaps = 0/196 (0%)

Query  5    TTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPDLVIM  64
            T DA  A  RRVL+AEDEALIR+DL EMLREEGYE+VGEAGDG+EAV+LA   KPDLVI+
Sbjct  8    TNDAAPAPQRRVLVAEDEALIRLDLVEMLREEGYEVVGEAGDGEEAVKLASELKPDLVIL  67

Query  65   DVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISDLIPA  124
            DVKMP+ DGI+AA++I   RIAP+V+LTAFSQR+LVERAR+AG MAYLVKPF+  DL+PA
Sbjct  68   DVKMPKLDGIEAAAKITGDRIAPVVILTAFSQRELVERAREAGTMAYLVKPFAKRDLVPA  127

Query  125  IELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRAAMDR  184
            IELAVSRF E+ ALE EVA L+ERLETRKL++RAKGLL T  G+TEPDAF+WIQR AMDR
Sbjct  128  IELAVSRFSELQALEAEVAGLNERLETRKLIDRAKGLLMTHQGLTEPDAFRWIQRTAMDR  187

Query  185  RTTMKRVAEVVLETLG  200
            RTTMK +A+ V++ +G
Sbjct  188  RTTMKAIAQAVIDNIG  203


>gi|302528128|ref|ZP_07280470.1| two-component system response regulatory protein [Streptomyces 
sp. AA4]
 gi|302437023|gb|EFL08839.1| two-component system response regulatory protein [Streptomyces 
sp. AA4]
Length=204

 Score =  287 bits (735),  Expect = 5e-76, Method: Compositional matrix adjust.
 Identities = 143/197 (73%), Positives = 170/197 (87%), Gaps = 1/197 (0%)

Query  5    TTDADAAVP-RRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPDLVI  63
            +  A A VP RRVL+AEDEALIR+DL EMLREEGYE+VGEAGDG+EA+ LA   KPDLVI
Sbjct  8    SNGAAAGVPQRRVLVAEDEALIRLDLVEMLREEGYEVVGEAGDGEEAIALATDLKPDLVI  67

Query  64   MDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISDLIP  123
            +DVKMP+ DGI+AA+ I   RIAP+V+LTAFSQRDLVERARDAG MAYLVKPF+  DL+P
Sbjct  68   LDVKMPKLDGIEAAARITGDRIAPVVILTAFSQRDLVERARDAGTMAYLVKPFAKRDLVP  127

Query  124  AIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRAAMD  183
            AIELAVSRF E+ ALE EVA L++RLETRK+++RAKGLL ++ G+TEPDAF+WIQR AMD
Sbjct  128  AIELAVSRFSELQALEAEVAGLTDRLETRKVIDRAKGLLMSRQGLTEPDAFRWIQRTAMD  187

Query  184  RRTTMKRVAEVVLETLG  200
            RRTTMK VAE V+E++G
Sbjct  188  RRTTMKAVAEAVVESIG  204


>gi|134101938|ref|YP_001107599.1| putative two-component system response regulator [Saccharopolyspora 
erythraea NRRL 2338]
 gi|291007050|ref|ZP_06565023.1| putative two-component system response regulator [Saccharopolyspora 
erythraea NRRL 2338]
 gi|133914561|emb|CAM04674.1| putative two-component system response regulator [Saccharopolyspora 
erythraea NRRL 2338]
Length=203

 Score =  285 bits (728),  Expect = 3e-75, Method: Compositional matrix adjust.
 Identities = 138/189 (74%), Positives = 165/189 (88%), Gaps = 0/189 (0%)

Query  12   VPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPDLVIMDVKMPRR  71
            V RRVL+AEDEALIR+DL EMLREEGY++VGEA DGQEAV LA+  +PDLVI+D+KMP+ 
Sbjct  15   VERRVLVAEDEALIRLDLVEMLREEGYQVVGEAADGQEAVRLADELRPDLVILDIKMPKM  74

Query  72   DGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISDLIPAIELAVSR  131
            DGI+AAS IA +RIAP+V+LTAFSQRDLVERARDAGAMAYLVKPF+  DL+PAIELAVSR
Sbjct  75   DGIEAASNIAGERIAPVVILTAFSQRDLVERARDAGAMAYLVKPFAKRDLVPAIELAVSR  134

Query  132  FREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRAAMDRRTTMKRV  191
            F E+ ALE EVA L+ERLE RK +ERAKGLL +KH ++EP++F+W+QR AMDRRTTMK V
Sbjct  135  FTEVQALEAEVADLNERLEARKTIERAKGLLMSKHSLSEPESFRWLQRTAMDRRTTMKAV  194

Query  192  AEVVLETLG  200
            A+ VL+ L 
Sbjct  195  AQAVLDNLS  203


>gi|262202790|ref|YP_003273998.1| response regulator receiver [Gordonia bronchialis DSM 43247]
 gi|262086137|gb|ACY22105.1| response regulator receiver [Gordonia bronchialis DSM 43247]
Length=206

 Score =  285 bits (728),  Expect = 3e-75, Method: Compositional matrix adjust.
 Identities = 139/191 (73%), Positives = 168/191 (88%), Gaps = 0/191 (0%)

Query  11   AVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPDLVIMDVKMPR  70
            A   +VL+AED++LIRMDL EMLREEGY++VGEA +GQ AVEL E   PDLVIMD+KMP 
Sbjct  16   ASAHKVLVAEDDSLIRMDLIEMLREEGYDVVGEAPNGQAAVELTESLGPDLVIMDIKMPI  75

Query  71   RDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISDLIPAIELAVS  130
            RDGIDAA+EIA KR+AP+V+LTAFSQRD +E+ARDAGAMAYLVKPF+ +DL+PAIE+AVS
Sbjct  76   RDGIDAATEIAQKRLAPVVMLTAFSQRDFIEKARDAGAMAYLVKPFTKADLVPAIEVAVS  135

Query  131  RFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRAAMDRRTTMKR  190
            R++E+  LE EVAT+++RLETRKLVERAKGLL  K  ++EP+AFKWIQRAAMDRRTTMK 
Sbjct  136  RYQELKMLEREVATVNDRLETRKLVERAKGLLMEKQALSEPEAFKWIQRAAMDRRTTMKA  195

Query  191  VAEVVLETLGT  201
            VA+VV+ETL T
Sbjct  196  VAQVVVETLAT  206


>gi|256379544|ref|YP_003103204.1| response regulator receiver and ANTAR domain-containing protein 
[Actinosynnema mirum DSM 43827]
 gi|255923847|gb|ACU39358.1| response regulator receiver and ANTAR domain protein [Actinosynnema 
mirum DSM 43827]
Length=200

 Score =  283 bits (724),  Expect = 1e-74, Method: Compositional matrix adjust.
 Identities = 141/200 (71%), Positives = 167/200 (84%), Gaps = 0/200 (0%)

Query  1    MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD  60
            MT        A PRRVL+AEDEALIR+DL EMLREEGYE+ G+A DG EA+ LA+  +PD
Sbjct  1    MTQAAEAQSQAAPRRVLVAEDEALIRLDLVEMLREEGYEVAGQAADGDEAITLAKELRPD  60

Query  61   LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD  120
            LVI+DVKMP+ DGI+AAS IA +R+AP+V+LTAFSQRDLVERARDAGAMAYLVKPF+  D
Sbjct  61   LVILDVKMPKVDGIEAASVIAGERVAPVVILTAFSQRDLVERARDAGAMAYLVKPFAKRD  120

Query  121  LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA  180
            L+PAIELA+SRF E+ ALE EVA L+ERLETRK+VERAKGLL TK  ++EP+AF+W+QR 
Sbjct  121  LVPAIELAMSRFSELQALELEVAGLNERLETRKVVERAKGLLMTKQNLSEPEAFRWVQRT  180

Query  181  AMDRRTTMKRVAEVVLETLG  200
            AMDRRTTMK VAE V+E  G
Sbjct  181  AMDRRTTMKAVAEAVIENFG  200


>gi|72161585|ref|YP_289242.1| response regulator receiver [Thermobifida fusca YX]
 gi|71915317|gb|AAZ55219.1| response regulator receiver [Thermobifida fusca YX]
Length=207

 Score =  278 bits (711),  Expect = 4e-73, Method: Compositional matrix adjust.
 Identities = 135/186 (73%), Positives = 164/186 (89%), Gaps = 0/186 (0%)

Query  15   RVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPDLVIMDVKMPRRDGI  74
            RV+IAEDEALIR+DL EML E+GYE+VGEAGDG+ AV LA   +PDLVI+D+KMP  DG+
Sbjct  20   RVVIAEDEALIRLDLKEMLEEDGYEVVGEAGDGETAVRLATELRPDLVILDIKMPVLDGL  79

Query  75   DAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISDLIPAIELAVSRFRE  134
             AA  IA++RIAP+V+LTAFSQRDLVERARDAGAMAYLVKPF+ SDL+PAIE+AVSR+ E
Sbjct  80   SAAERIAAERIAPVVILTAFSQRDLVERARDAGAMAYLVKPFTKSDLVPAIEMAVSRYAE  139

Query  135  ITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRAAMDRRTTMKRVAEV  194
            ITALE EV  L+ERLETRK+VERAKGLLQ K+G++EP+AF+WIQ+ +MDRR TM++VAE 
Sbjct  140  ITALEAEVTGLTERLETRKIVERAKGLLQKKYGLSEPEAFRWIQKNSMDRRLTMRKVAET  199

Query  195  VLETLG  200
            V+ETL 
Sbjct  200  VVETLS  205


>gi|254387264|ref|ZP_05002525.1| two-component system response regulator [Streptomyces sp. Mg1]
 gi|194346070|gb|EDX27036.1| two-component system response regulator [Streptomyces sp. Mg1]
Length=217

 Score =  276 bits (705),  Expect = 2e-72, Method: Compositional matrix adjust.
 Identities = 141/200 (71%), Positives = 169/200 (85%), Gaps = 4/200 (2%)

Query  2    TGPTTDADAA-VP---RRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELH  57
            + PT DAD + VP    RV+IAEDEALIR+DL EML EEGY +VGEAGDGQ AVELA  H
Sbjct  7    STPTPDADQSHVPPLTTRVVIAEDEALIRLDLKEMLEEEGYSVVGEAGDGQTAVELAREH  66

Query  58   KPDLVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFS  117
            +PDLVI+DVKMP  DGI AA +IA + IAP+++LTAFSQRDLVERARDAGAMAYLVKPFS
Sbjct  67   RPDLVILDVKMPVLDGISAAEKIAEESIAPVLMLTAFSQRDLVERARDAGAMAYLVKPFS  126

Query  118  ISDLIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWI  177
             SD++PAIE+AVSRF E+ ALE EVA LS RLETRKLV+RAK +LQT++G+TEP AF+WI
Sbjct  127  KSDVVPAIEMAVSRFAELRALEKEVADLSLRLETRKLVDRAKSILQTQYGLTEPAAFRWI  186

Query  178  QRAAMDRRTTMKRVAEVVLE  197
            Q+ +MDRR +M++VAE V+E
Sbjct  187  QKTSMDRRMSMQQVAEAVIE  206


>gi|326382643|ref|ZP_08204334.1| response regulator receiver [Gordonia neofelifaecis NRRL B-59395]
 gi|326198762|gb|EGD55945.1| response regulator receiver [Gordonia neofelifaecis NRRL B-59395]
Length=207

 Score =  275 bits (703),  Expect = 3e-72, Method: Compositional matrix adjust.
 Identities = 138/199 (70%), Positives = 166/199 (84%), Gaps = 2/199 (1%)

Query  1    MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPD  60
            M  P   A  A   RV++AED++LIRMDL EMLR+EGY++VGEA +GQ AV+LAE   PD
Sbjct  6    MNDPGKPASPA--SRVVVAEDDSLIRMDLIEMLRDEGYDVVGEAPNGQVAVDLAEQLHPD  63

Query  61   LVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISD  120
            LVIMDVKMP RDGIDAASEIA KRIAP+V+LTAFSQR+ VERARDAGAMAYLVKPF+ +D
Sbjct  64   LVIMDVKMPVRDGIDAASEIARKRIAPVVMLTAFSQREFVERARDAGAMAYLVKPFTQAD  123

Query  121  LIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRA  180
            L+PAIE+A+SR+RE+  LE E+A +S R E RKL+ERAKGLL  K GMTEP+AF+WIQR 
Sbjct  124  LVPAIEVALSRYRELKVLEAEIADMSGRFEARKLIERAKGLLMEKQGMTEPEAFRWIQRN  183

Query  181  AMDRRTTMKRVAEVVLETL  199
            AMD+R TMK VAE+V++TL
Sbjct  184  AMDKRATMKAVAEIVVDTL  202


>gi|297198977|ref|ZP_06916374.1| two-component system response regulator [Streptomyces sviceus 
ATCC 29083]
 gi|197711101|gb|EDY55135.1| two-component system response regulator [Streptomyces sviceus 
ATCC 29083]
Length=218

 Score =  274 bits (701),  Expect = 4e-72, Method: Compositional matrix adjust.
 Identities = 131/182 (72%), Positives = 161/182 (89%), Gaps = 0/182 (0%)

Query  15   RVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPDLVIMDVKMPRRDGI  74
            RV+IAEDEALIR+DL EML EEGY +VGEAGDG++A+ELA  HKPDLVI+DVKMP+ DGI
Sbjct  26   RVVIAEDEALIRLDLKEMLEEEGYSVVGEAGDGEQAIELAREHKPDLVILDVKMPKLDGI  85

Query  75   DAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISDLIPAIELAVSRFRE  134
             AA +IA +RIAP+++LTAFSQRDLVERARDAGAMAYLVKPFS SD++PAIE+AVSRF E
Sbjct  86   SAAEKIAEERIAPVLMLTAFSQRDLVERARDAGAMAYLVKPFSKSDVVPAIEMAVSRFTE  145

Query  135  ITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRAAMDRRTTMKRVAEV  194
            +  LE EVA L++RLETRKLV+RAK +LQT +G+TEP AF+WIQ+ +MDRR +M++VAE 
Sbjct  146  LKELENEVADLTQRLETRKLVDRAKSILQTSYGLTEPAAFRWIQKTSMDRRMSMQQVAEA  205

Query  195  VL  196
            V+
Sbjct  206  VI  207


>gi|331697662|ref|YP_004333901.1| response regulator receiver and ANTAR domain-containing protein 
[Pseudonocardia dioxanivorans CB1190]
 gi|326952351|gb|AEA26048.1| response regulator receiver and ANTAR domain protein [Pseudonocardia 
dioxanivorans CB1190]
Length=209

 Score =  274 bits (701),  Expect = 5e-72, Method: Compositional matrix adjust.
 Identities = 137/186 (74%), Positives = 160/186 (87%), Gaps = 0/186 (0%)

Query  15   RVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPDLVIMDVKMPRRDGI  74
            RVL+AEDEALIR+DL EML EEGY+I GEAGDG+ AVELA    PDLVIMD+KMP++DGI
Sbjct  21   RVLVAEDEALIRLDLTEMLTEEGYQIAGEAGDGEAAVELARSLGPDLVIMDIKMPKKDGI  80

Query  75   DAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISDLIPAIELAVSRFRE  134
            +AA  I  +RIAP+V+LTAFSQRDL+ERARDAGAMAYLVKPF+  +L+PAIELAVSRF E
Sbjct  81   EAAGTIVEERIAPVVMLTAFSQRDLIERARDAGAMAYLVKPFARHELVPAIELAVSRFAE  140

Query  135  ITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRAAMDRRTTMKRVAEV  194
              ALE EVATLS+RLETRK+V+RAKGLL +K  M+EP+AF+WIQR AMDRRTTMK VAE 
Sbjct  141  KKALEDEVATLSDRLETRKVVDRAKGLLMSKQNMSEPEAFRWIQRTAMDRRTTMKAVAEA  200

Query  195  VLETLG  200
            V+E L 
Sbjct  201  VVEGLA  206


>gi|297194982|ref|ZP_06912380.1| two-component system response regulator [Streptomyces pristinaespiralis 
ATCC 25486]
 gi|197721905|gb|EDY65813.1| two-component system response regulator [Streptomyces pristinaespiralis 
ATCC 25486]
Length=218

 Score =  274 bits (701),  Expect = 5e-72, Method: Compositional matrix adjust.
 Identities = 134/183 (74%), Positives = 161/183 (88%), Gaps = 0/183 (0%)

Query  15   RVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPDLVIMDVKMPRRDGI  74
            RV+IAEDEALIR+DL EML EEGY +VGEAGDGQ AVELA  H+PDLVI+DVKMP  DGI
Sbjct  25   RVVIAEDEALIRLDLKEMLEEEGYSVVGEAGDGQRAVELAREHRPDLVILDVKMPVLDGI  84

Query  75   DAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISDLIPAIELAVSRFRE  134
             AA +IA + IAP+++LTAFSQRDLVERARDAGAMAYLVKPFS SD++PAIE+AVSRF E
Sbjct  85   SAAEKIAEESIAPVLMLTAFSQRDLVERARDAGAMAYLVKPFSKSDVVPAIEMAVSRFTE  144

Query  135  ITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRAAMDRRTTMKRVAEV  194
            + ALE EVA LS+RLETRKLV+RAK +LQT++G+TEP AF+WIQ+ +MDRR +M++VAE 
Sbjct  145  LKALEQEVADLSQRLETRKLVDRAKSILQTQYGLTEPAAFRWIQKTSMDRRLSMQQVAEA  204

Query  195  VLE  197
            V+E
Sbjct  205  VIE  207


>gi|271964457|ref|YP_003338653.1| response regulator [Streptosporangium roseum DSM 43021]
 gi|270507632|gb|ACZ85910.1| response regulator [Streptosporangium roseum DSM 43021]
Length=199

 Score =  274 bits (700),  Expect = 6e-72, Method: Compositional matrix adjust.
 Identities = 138/189 (74%), Positives = 163/189 (87%), Gaps = 2/189 (1%)

Query  14   RRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPDLVIMDVKMPRRDG  73
            RRV+IAEDEALIR+DL EML E+GY +VGEAGDG+ AV+LA  H+PDLVI+DVKMP  DG
Sbjct  5    RRVVIAEDEALIRLDLKEMLEEDGYAVVGEAGDGEAAVKLALEHRPDLVILDVKMPILDG  64

Query  74   IDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISDLIPAIELAVSRFR  133
            I AA +I S+RIAP ++LTAFSQRDLVERARDAGAMAYLVKPF+ SDL+PAIE+AVSR  
Sbjct  65   ISAAEQIVSQRIAPCLILTAFSQRDLVERARDAGAMAYLVKPFTKSDLVPAIEMAVSRHE  124

Query  134  EITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRAAMDRRTTMKRVAE  193
            EI ALE EV TLSERLETRKLVERAKG L  +HG +EP AF+WIQ+A+MDRR +M++VA+
Sbjct  125  EIAALEREVGTLSERLETRKLVERAKGRLMEQHGWSEPQAFRWIQKASMDRRLSMRQVAQ  184

Query  194  VVLETLGTP  202
            VVL+  GTP
Sbjct  185  VVLD--GTP  191


>gi|297562099|ref|YP_003681073.1| response regulator receiver and ANTAR domain-containing protein 
[Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111]
 gi|296846547|gb|ADH68567.1| response regulator receiver and ANTAR domain protein [Nocardiopsis 
dassonvillei subsp. dassonvillei DSM 43111]
Length=212

 Score =  274 bits (700),  Expect = 7e-72, Method: Compositional matrix adjust.
 Identities = 130/186 (70%), Positives = 164/186 (89%), Gaps = 0/186 (0%)

Query  15   RVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPDLVIMDVKMPRRDGI  74
            RV+IAEDEALIR+DL EML E+GY +VGEAGDG+  + LA+  KPDLVI D+KMP  DG+
Sbjct  24   RVVIAEDEALIRLDLKEMLEEDGYAVVGEAGDGETVIRLAQELKPDLVITDIKMPVLDGL  83

Query  75   DAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISDLIPAIELAVSRFRE  134
             AA  IA++RIAP+V+LTAFSQR+LVERAR+AGAMAYLVKPF+ +DL+PAIE+A SR+ E
Sbjct  84   SAAERIAAERIAPVVILTAFSQRELVERAREAGAMAYLVKPFNKADLVPAIEMATSRYAE  143

Query  135  ITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRAAMDRRTTMKRVAEV  194
            ++ALE EV++L ERLETRKLVE+AKGLLQ++HGM+EP+AF+WIQ+ +MDRR TM+RVAE 
Sbjct  144  LSALESEVSSLQERLETRKLVEQAKGLLQSRHGMSEPEAFRWIQKNSMDRRLTMRRVAET  203

Query  195  VLETLG  200
            V+ETLG
Sbjct  204  VVETLG  209


>gi|328881687|emb|CCA54926.1| putative two-component system response regulator [Streptomyces 
venezuelae ATCC 10712]
Length=217

 Score =  274 bits (700),  Expect = 7e-72, Method: Compositional matrix adjust.
 Identities = 139/198 (71%), Positives = 169/198 (86%), Gaps = 4/198 (2%)

Query  4    PTTDADAA-VP---RRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKP  59
            P  DADA+ VP    RV+IAEDEALIR+DL EML EEGY +VGEAGDG +AVELA  H+P
Sbjct  9    PADDADASHVPPLTTRVVIAEDEALIRLDLKEMLEEEGYTVVGEAGDGAKAVELAREHRP  68

Query  60   DLVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSIS  119
            DLVI+DVKMP  DGI AA +IA + IAP+++LTAFSQR+LVERARDAGAMAYLVKPFS S
Sbjct  69   DLVILDVKMPVLDGISAAEKIAGESIAPVLMLTAFSQRELVERARDAGAMAYLVKPFSKS  128

Query  120  DLIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQR  179
            D++PAIE+AVSRF E+ ALE EVA LS+RLETRKLV+RAK +LQT++G+TEP AF+WIQ+
Sbjct  129  DVVPAIEMAVSRFSELRALEQEVADLSQRLETRKLVDRAKSILQTQYGLTEPAAFRWIQK  188

Query  180  AAMDRRTTMKRVAEVVLE  197
             +MDRR +M++VAE V+E
Sbjct  189  TSMDRRMSMQQVAEAVIE  206


>gi|21220495|ref|NP_626274.1| two-component system response regulator [Streptomyces coelicolor 
A3(2)]
 gi|289772264|ref|ZP_06531642.1| two-component system response regulator [Streptomyces lividans 
TK24]
 gi|5689906|emb|CAB52069.1| putative two-component system response regulator [Streptomyces 
coelicolor A3(2)]
 gi|289702463|gb|EFD69892.1| two-component system response regulator [Streptomyces lividans 
TK24]
Length=218

 Score =  273 bits (698),  Expect = 1e-71, Method: Compositional matrix adjust.
 Identities = 133/183 (73%), Positives = 162/183 (89%), Gaps = 0/183 (0%)

Query  15   RVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPDLVIMDVKMPRRDGI  74
            RV+IAEDEALIR+DL EML EEGY +VGEAGDG+EAVELA  H+PDLVI+DVKMP+ DGI
Sbjct  26   RVVIAEDEALIRLDLKEMLEEEGYSVVGEAGDGEEAVELAREHRPDLVILDVKMPKMDGI  85

Query  75   DAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISDLIPAIELAVSRFRE  134
             AA +IA + IAP+++LTAFSQRDLVERARDAGAMAYLVKPFS SD++PAIE+AVSRF E
Sbjct  86   SAAEKIAEESIAPVLMLTAFSQRDLVERARDAGAMAYLVKPFSKSDVVPAIEMAVSRFTE  145

Query  135  ITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRAAMDRRTTMKRVAEV  194
            + ALE EVA LS RLETRKLV+RAK +LQT++G+TEP AF+WIQ+ +MDRR +M++VAE 
Sbjct  146  LKALEKEVADLSLRLETRKLVDRAKSVLQTEYGLTEPAAFRWIQKTSMDRRMSMQQVAEA  205

Query  195  VLE  197
            V++
Sbjct  206  VIQ  208


>gi|302533855|ref|ZP_07286197.1| two-component system response regulator [Streptomyces sp. C]
 gi|302442750|gb|EFL14566.1| two-component system response regulator [Streptomyces sp. C]
Length=217

 Score =  273 bits (698),  Expect = 1e-71, Method: Compositional matrix adjust.
 Identities = 139/200 (70%), Positives = 168/200 (84%), Gaps = 4/200 (2%)

Query  2    TGPTTDADAA-VP---RRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELH  57
            + PT DAD + VP    RV+IAEDEALIR+DL EML EEGY +VGEAGDGQ AVELA  H
Sbjct  7    STPTPDADQSHVPPLTTRVVIAEDEALIRLDLKEMLEEEGYSVVGEAGDGQTAVELAREH  66

Query  58   KPDLVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFS  117
            +PDLVI+DVKMP  DGI AA +IA + IAP+++LTAFSQRDLVERARDAGAMAYLVKPFS
Sbjct  67   RPDLVILDVKMPVLDGISAAEKIAGESIAPVLMLTAFSQRDLVERARDAGAMAYLVKPFS  126

Query  118  ISDLIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWI  177
             SD++PAIE+AVSRF E+ ALE EVA LS RLETRKLV+RAK +LQT++ ++EP AF+WI
Sbjct  127  KSDVVPAIEMAVSRFAELKALEKEVADLSARLETRKLVDRAKSILQTEYKLSEPAAFRWI  186

Query  178  QRAAMDRRTTMKRVAEVVLE  197
            Q+ +MDRR +M++VAE V+E
Sbjct  187  QKTSMDRRMSMQQVAEAVIE  206


>gi|329940869|ref|ZP_08290149.1| two-component system response regulator [Streptomyces griseoaurantiacus 
M045]
 gi|329300163|gb|EGG44061.1| two-component system response regulator [Streptomyces griseoaurantiacus 
M045]
Length=218

 Score =  273 bits (697),  Expect = 1e-71, Method: Compositional matrix adjust.
 Identities = 141/208 (68%), Positives = 171/208 (83%), Gaps = 11/208 (5%)

Query  1    MTGPTT--DADAA------VP---RRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQE  49
            MT P +   ADAA      VP    RV+IAEDEALIR+DL EML EEGY +VGEAGDG+ 
Sbjct  1    MTAPESPQSADAADEDTSHVPPSTTRVVIAEDEALIRLDLREMLEEEGYSVVGEAGDGER  60

Query  50   AVELAELHKPDLVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAM  109
            AVELA  H+PDLVI+DVKMP+ DGI AA  IA +RIAP+++LTAFSQRDLVERARDAGAM
Sbjct  61   AVELAREHRPDLVILDVKMPKLDGISAAERIAEERIAPVLMLTAFSQRDLVERARDAGAM  120

Query  110  AYLVKPFSISDLIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMT  169
            AYLVKPFS SD++PAIE+AVSRF E+  LE EVA LS+RLETRKLV+RAK +LQT++G+T
Sbjct  121  AYLVKPFSKSDVVPAIEMAVSRFTELKELEKEVADLSQRLETRKLVDRAKSVLQTEYGLT  180

Query  170  EPDAFKWIQRAAMDRRTTMKRVAEVVLE  197
            EP AF+WIQ+ +MDRR +M++VAE V++
Sbjct  181  EPAAFRWIQKTSMDRRMSMQQVAEAVIQ  208



Lambda     K      H
   0.318    0.133    0.360 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 229991766768


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40