BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1628c
Length=163
Score E
Sequences producing significant alignments: (Bits) Value
gi|15608766|ref|NP_216144.1| hypothetical protein Rv1628c [Mycob... 332 2e-89
gi|121637535|ref|YP_977758.1| hypothetical protein BCG_1666c [My... 330 4e-89
gi|254820980|ref|ZP_05225981.1| hypothetical protein MintA_13680... 263 9e-69
gi|240168006|ref|ZP_04746665.1| hypothetical protein MkanA1_0173... 244 3e-63
gi|118617250|ref|YP_905582.1| hypothetical protein MUL_1610 [Myc... 238 2e-61
gi|342860800|ref|ZP_08717450.1| hypothetical protein MCOL_18053 ... 231 3e-59
gi|41407419|ref|NP_960255.1| hypothetical protein MAP1321c [Myco... 226 6e-58
gi|296164497|ref|ZP_06847068.1| conserved hypothetical protein [... 226 1e-57
gi|126435608|ref|YP_001071299.1| hypothetical protein Mjls_3029 ... 223 8e-57
gi|108799980|ref|YP_640177.1| hypothetical protein Mmcs_3014 [My... 221 3e-56
gi|333990441|ref|YP_004523055.1| hypothetical protein JDM601_180... 214 4e-54
gi|118470514|ref|YP_888134.1| hypothetical protein MSMEG_3843 [M... 213 5e-54
gi|145224151|ref|YP_001134829.1| hypothetical protein Mflv_3567 ... 206 8e-52
gi|315444486|ref|YP_004077365.1| nucleic-acid-binding protein co... 205 2e-51
gi|120403846|ref|YP_953675.1| hypothetical protein Mvan_2863 [My... 202 1e-50
gi|120404339|ref|YP_954168.1| hypothetical protein Mvan_3365 [My... 202 2e-50
gi|169629704|ref|YP_001703353.1| hypothetical protein MAB_2618 [... 190 5e-47
gi|145225104|ref|YP_001135782.1| hypothetical protein Mflv_4526 ... 178 2e-43
gi|304312368|ref|YP_003811966.1| Probably subunit of benzoylsucc... 143 7e-33
gi|119715185|ref|YP_922150.1| hypothetical protein Noca_0940 [No... 137 4e-31
gi|254480212|ref|ZP_05093460.1| conserved domain protein, putati... 132 1e-29
gi|148556526|ref|YP_001264108.1| hypothetical protein Swit_3624 ... 131 4e-29
gi|312139909|ref|YP_004007245.1| hypothetical protein REQ_25260 ... 127 4e-28
gi|271970106|ref|YP_003344302.1| hypothetical protein Sros_8927 ... 121 4e-26
gi|226309119|ref|YP_002769079.1| hypothetical protein RER_56320 ... 119 2e-25
gi|229491734|ref|ZP_04385555.1| conserved hypothetical protein [... 117 4e-25
gi|328881034|emb|CCA54273.1| hypothetical protein SVEN_0986 [Str... 108 2e-22
gi|290961942|ref|YP_003493124.1| hypothetical protein SCAB_76151... 108 2e-22
gi|29833509|ref|NP_828143.1| hypothetical protein SAV_6967 [Stre... 107 4e-22
gi|302533245|ref|ZP_07285587.1| conserved hypothetical protein [... 106 9e-22
gi|302540696|ref|ZP_07293038.1| conserved hypothetical protein [... 104 4e-21
gi|239986330|ref|ZP_04706994.1| hypothetical protein SrosN1_0338... 103 8e-21
gi|297198234|ref|ZP_06915631.1| conserved hypothetical protein [... 103 9e-21
gi|345013144|ref|YP_004815498.1| hypothetical protein Strvi_5707... 103 1e-20
gi|297155401|gb|ADI05113.1| hypothetical protein SBI_01992 [Stre... 101 4e-20
gi|182439924|ref|YP_001827643.1| hypothetical protein SGR_6131 [... 100 6e-20
gi|326780591|ref|ZP_08239856.1| protein of unknown function DUF3... 100 7e-20
gi|294811463|ref|ZP_06770106.1| DUF35 domain-containing protein ... 84.0 8e-15
gi|291441639|ref|ZP_06581029.1| conserved hypothetical protein [... 81.6 3e-14
gi|119504558|ref|ZP_01626637.1| hypothetical protein MGP2080_131... 81.6 4e-14
gi|325002860|ref|ZP_08123972.1| hypothetical protein PseP1_29035... 79.7 1e-13
gi|297204591|ref|ZP_06921988.1| conserved hypothetical protein [... 79.7 1e-13
gi|118473081|ref|YP_889034.1| hypothetical protein MSMEG_4777 [M... 77.8 5e-13
gi|158315694|ref|YP_001508202.1| hypothetical protein Franean1_3... 77.8 5e-13
gi|312199236|ref|YP_004019297.1| hypothetical protein FraEuI1c_5... 73.2 1e-11
gi|288916558|ref|ZP_06410934.1| protein of unknown function DUF3... 73.2 1e-11
gi|119718351|ref|YP_925316.1| hypothetical protein Noca_4132 [No... 72.8 2e-11
gi|302383134|ref|YP_003818957.1| hypothetical protein Bresu_2023... 71.2 4e-11
gi|146275781|ref|YP_001165941.1| hypothetical protein Saro_3555 ... 71.2 4e-11
gi|120405092|ref|YP_954921.1| hypothetical protein Mvan_4138 [My... 70.5 8e-11
>gi|15608766|ref|NP_216144.1| hypothetical protein Rv1628c [Mycobacterium tuberculosis H37Rv]
gi|15841083|ref|NP_336120.1| hypothetical protein MT1664 [Mycobacterium tuberculosis CDC1551]
gi|31792814|ref|NP_855307.1| hypothetical protein Mb1654c [Mycobacterium bovis AF2122/97]
73 more sequence titles
Length=163
Score = 332 bits (850), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 162/163 (99%), Positives = 163/163 (100%), Gaps = 0/163 (0%)
Query 1 VPEVTREEPAIDGWFTTDKAGNPHLLGGKCPQCGTYVFPPRADNCPNPACGSDTLESVGL 60
+PEVTREEPAIDGWFTTDKAGNPHLLGGKCPQCGTYVFPPRADNCPNPACGSDTLESVGL
Sbjct 1 MPEVTREEPAIDGWFTTDKAGNPHLLGGKCPQCGTYVFPPRADNCPNPACGSDTLESVGL 60
Query 61 STRGKLWSYTENRYAPPPPYPAPDPFEPFAVAAVELADEGLIVLGKVVDGTLAADLKVGM 120
STRGKLWSYTENRYAPPPPYPAPDPFEPFAVAAVELADEGLIVLGKVVDGTLAADLKVGM
Sbjct 61 STRGKLWSYTENRYAPPPPYPAPDPFEPFAVAAVELADEGLIVLGKVVDGTLAADLKVGM 120
Query 121 EMELTTMPLFADDDGVQRIVYAWRIPSRAGDDAERSDAEERRR 163
EMELTTMPLFADDDGVQRIVYAWRIPSRAGDDAERSDAEERRR
Sbjct 121 EMELTTMPLFADDDGVQRIVYAWRIPSRAGDDAERSDAEERRR 163
>gi|121637535|ref|YP_977758.1| hypothetical protein BCG_1666c [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224990010|ref|YP_002644697.1| hypothetical protein JTY_1641 [Mycobacterium bovis BCG str. Tokyo
172]
gi|121493182|emb|CAL71653.1| Conserved hypothetical protein [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224773123|dbj|BAH25929.1| hypothetical protein JTY_1641 [Mycobacterium bovis BCG str. Tokyo
172]
gi|341601553|emb|CCC64226.1| conserved hypothetical protein [Mycobacterium bovis BCG str.
Moreau RDJ]
Length=163
Score = 330 bits (846), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 161/163 (99%), Positives = 162/163 (99%), Gaps = 0/163 (0%)
Query 1 VPEVTREEPAIDGWFTTDKAGNPHLLGGKCPQCGTYVFPPRADNCPNPACGSDTLESVGL 60
+PEVTREEPAIDGWFTTDKAGNPHLLGGKCPQCGTYVFPPRADNCPNPACGSDTLESVGL
Sbjct 1 MPEVTREEPAIDGWFTTDKAGNPHLLGGKCPQCGTYVFPPRADNCPNPACGSDTLESVGL 60
Query 61 STRGKLWSYTENRYAPPPPYPAPDPFEPFAVAAVELADEGLIVLGKVVDGTLAADLKVGM 120
STRGKLWSYTENRYAPPPPYPAPDPFEPFAVA VELADEGLIVLGKVVDGTLAADLKVGM
Sbjct 61 STRGKLWSYTENRYAPPPPYPAPDPFEPFAVAVVELADEGLIVLGKVVDGTLAADLKVGM 120
Query 121 EMELTTMPLFADDDGVQRIVYAWRIPSRAGDDAERSDAEERRR 163
EMELTTMPLFADDDGVQRIVYAWRIPSRAGDDAERSDAEERRR
Sbjct 121 EMELTTMPLFADDDGVQRIVYAWRIPSRAGDDAERSDAEERRR 163
>gi|254820980|ref|ZP_05225981.1| hypothetical protein MintA_13680 [Mycobacterium intracellulare
ATCC 13950]
Length=160
Score = 263 bits (671), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 136/163 (84%), Positives = 150/163 (93%), Gaps = 3/163 (1%)
Query 1 VPEVTREEPAIDGWFTTDKAGNPHLLGGKCPQCGTYVFPPRADNCPNPACGSDTLESVGL 60
+PEV R+EPA+DGWF TD AG PHL+G KCP+CGTYVFPPRA+NCPNP C SDTLESV L
Sbjct 1 MPEVIRQEPAVDGWFATDDAGVPHLIGSKCPECGTYVFPPRANNCPNPGCASDTLESVAL 60
Query 61 STRGKLWSYTENRYAPPPPYPAPDPFEPFAVAAVELADEGLIVLGKVVDGTLAADLKVGM 120
STRGKLWSYTENRYAPPPPYP+PDPFEPFAVAAVELA+EGLIVLGKVV+GTLAADLKVGM
Sbjct 61 STRGKLWSYTENRYAPPPPYPSPDPFEPFAVAAVELAEEGLIVLGKVVEGTLAADLKVGM 120
Query 121 EMELTTMPLFADDDGVQRIVYAWRIPSRAGDDAERSDAEERRR 163
EMELTTMPL+ DDDGVQRIV+AW+ RAGDDAERSD +ERR+
Sbjct 121 EMELTTMPLYTDDDGVQRIVHAWK---RAGDDAERSDEKERRK 160
>gi|240168006|ref|ZP_04746665.1| hypothetical protein MkanA1_01730 [Mycobacterium kansasii ATCC
12478]
Length=148
Score = 244 bits (623), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 127/145 (88%), Positives = 133/145 (92%), Gaps = 0/145 (0%)
Query 1 VPEVTREEPAIDGWFTTDKAGNPHLLGGKCPQCGTYVFPPRADNCPNPACGSDTLESVGL 60
+PEVT + PA+DGWF TD AGNPHL G KCPQCGTYVFPPR +NCPNPAC SD LESV L
Sbjct 1 MPEVTSQAPAVDGWFATDDAGNPHLTGSKCPQCGTYVFPPRENNCPNPACESDALESVVL 60
Query 61 STRGKLWSYTENRYAPPPPYPAPDPFEPFAVAAVELADEGLIVLGKVVDGTLAADLKVGM 120
S RGKLWSYTENRYAPPPPYP+PDPFEPFAVAAVELADEGLIVLGKVV+GTLAADLKVGM
Sbjct 61 SRRGKLWSYTENRYAPPPPYPSPDPFEPFAVAAVELADEGLIVLGKVVEGTLAADLKVGM 120
Query 121 EMELTTMPLFADDDGVQRIVYAWRI 145
EMELTTMPLF DDDGVQRIVYAWRI
Sbjct 121 EMELTTMPLFTDDDGVQRIVYAWRI 145
>gi|118617250|ref|YP_905582.1| hypothetical protein MUL_1610 [Mycobacterium ulcerans Agy99]
gi|183982445|ref|YP_001850736.1| hypothetical protein MMAR_2431 [Mycobacterium marinum M]
gi|118569360|gb|ABL04111.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
gi|183175771|gb|ACC40881.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=146
Score = 238 bits (607), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 121/145 (84%), Positives = 135/145 (94%), Gaps = 0/145 (0%)
Query 1 VPEVTREEPAIDGWFTTDKAGNPHLLGGKCPQCGTYVFPPRADNCPNPACGSDTLESVGL 60
+PEVT ++PA+ GWFTTD+AG+PHL+G KCP CGTYVFPPR +NCPNPAC +D LESV L
Sbjct 1 MPEVTSQQPAVAGWFTTDEAGSPHLIGSKCPPCGTYVFPPRENNCPNPACANDKLESVAL 60
Query 61 STRGKLWSYTENRYAPPPPYPAPDPFEPFAVAAVELADEGLIVLGKVVDGTLAADLKVGM 120
S RGKLWSYTENRYAPPPPYP+PDPFEPFAVAAVELADEGLIVLGKVV+GTLAADLK+GM
Sbjct 61 SRRGKLWSYTENRYAPPPPYPSPDPFEPFAVAAVELADEGLIVLGKVVEGTLAADLKIGM 120
Query 121 EMELTTMPLFADDDGVQRIVYAWRI 145
EMELTTMPLF D+DGV+RIVYAWRI
Sbjct 121 EMELTTMPLFTDEDGVERIVYAWRI 145
>gi|342860800|ref|ZP_08717450.1| hypothetical protein MCOL_18053 [Mycobacterium colombiense CECT
3035]
gi|342131824|gb|EGT85081.1| hypothetical protein MCOL_18053 [Mycobacterium colombiense CECT
3035]
Length=147
Score = 231 bits (588), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 116/145 (80%), Positives = 129/145 (89%), Gaps = 0/145 (0%)
Query 1 VPEVTREEPAIDGWFTTDKAGNPHLLGGKCPQCGTYVFPPRADNCPNPACGSDTLESVGL 60
+PEVT + AIDGWF TD AGNPHL+G KCP+CGTYVFPPR +NCPNPAC SDTLESV L
Sbjct 1 MPEVTSTQAAIDGWFATDDAGNPHLIGSKCPECGTYVFPPRENNCPNPACASDTLESVAL 60
Query 61 STRGKLWSYTENRYAPPPPYPAPDPFEPFAVAAVELADEGLIVLGKVVDGTLAADLKVGM 120
STRG LWSYTENRY PP PYPA DPFEPFA+AAVELADEG+IVLGKVV+GTLAADLKVGM
Sbjct 61 STRGTLWSYTENRYPPPAPYPAADPFEPFAIAAVELADEGIIVLGKVVEGTLAADLKVGM 120
Query 121 EMELTTMPLFADDDGVQRIVYAWRI 145
EMEL TM LF DDDGV+R+V+AW++
Sbjct 121 EMELATMTLFTDDDGVERLVHAWKV 145
>gi|41407419|ref|NP_960255.1| hypothetical protein MAP1321c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118462243|ref|YP_882340.1| hypothetical protein MAV_3156 [Mycobacterium avium 104]
gi|254775606|ref|ZP_05217122.1| hypothetical protein MaviaA2_13188 [Mycobacterium avium subsp.
avium ATCC 25291]
gi|41395771|gb|AAS03638.1| hypothetical protein MAP_1321c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118163530|gb|ABK64427.1| conserved hypothetical protein [Mycobacterium avium 104]
gi|336457771|gb|EGO36765.1| putative nucleic-acid-binding protein containing a Zn-ribbon
[Mycobacterium avium subsp. paratuberculosis S397]
Length=146
Score = 226 bits (577), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 116/144 (81%), Positives = 129/144 (90%), Gaps = 0/144 (0%)
Query 1 VPEVTREEPAIDGWFTTDKAGNPHLLGGKCPQCGTYVFPPRADNCPNPACGSDTLESVGL 60
+PEV R++PA++GWF TD+AG PHL+G KCPQCGTYVFPPR +NCPNP C D LES L
Sbjct 1 MPEVIRQQPAVEGWFATDEAGAPHLIGSKCPQCGTYVFPPRENNCPNPGCDGDALESTPL 60
Query 61 STRGKLWSYTENRYAPPPPYPAPDPFEPFAVAAVELADEGLIVLGKVVDGTLAADLKVGM 120
S RG LWSYTENRYAPPPPYP+PDPFEPFAVAAVELA EGLIVLGKVV+GTLAADLKVGM
Sbjct 61 SRRGTLWSYTENRYAPPPPYPSPDPFEPFAVAAVELAKEGLIVLGKVVEGTLAADLKVGM 120
Query 121 EMELTTMPLFADDDGVQRIVYAWR 144
EMELTTMPL+ DDDGVQR+V+AWR
Sbjct 121 EMELTTMPLYTDDDGVQRMVHAWR 144
>gi|296164497|ref|ZP_06847068.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295900097|gb|EFG79532.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=149
Score = 226 bits (575), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 118/149 (80%), Positives = 131/149 (88%), Gaps = 0/149 (0%)
Query 1 VPEVTREEPAIDGWFTTDKAGNPHLLGGKCPQCGTYVFPPRADNCPNPACGSDTLESVGL 60
+PEVT ++PAIDGWF TD AG PHL+GGKCP CGTYVFPPR +NCPNP C SD LE V L
Sbjct 1 MPEVTSQQPAIDGWFATDDAGKPHLIGGKCPACGTYVFPPRENNCPNPGCASDALEPVAL 60
Query 61 STRGKLWSYTENRYAPPPPYPAPDPFEPFAVAAVELADEGLIVLGKVVDGTLAADLKVGM 120
STRG LWSYTENRY PPPPYPAPDPFEPFA+AAVELA EGLIVLGKVV+GTLA DLKVGM
Sbjct 61 STRGTLWSYTENRYPPPPPYPAPDPFEPFAIAAVELAGEGLIVLGKVVEGTLADDLKVGM 120
Query 121 EMELTTMPLFADDDGVQRIVYAWRIPSRA 149
EMELTTMPL+ DDDGV+RIV+AW++ + A
Sbjct 121 EMELTTMPLYTDDDGVERIVHAWKVAADA 149
>gi|126435608|ref|YP_001071299.1| hypothetical protein Mjls_3029 [Mycobacterium sp. JLS]
gi|126235408|gb|ABN98808.1| protein of unknown function DUF35 [Mycobacterium sp. JLS]
Length=155
Score = 223 bits (568), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 119/149 (80%), Positives = 130/149 (88%), Gaps = 1/149 (0%)
Query 8 EPAIDGWFTTDKAGNPHLLGGKCPQCGTYVFPPRADNCPNPACGSDTLESVGLSTRGKLW 67
+PAIDGWF TD +G +L+GGKC QCGTYVFPPRA+NCPNPAC D L V LS RGKLW
Sbjct 7 QPAIDGWFATDGSGEAYLIGGKCHQCGTYVFPPRANNCPNPACDGDDLAQVPLSRRGKLW 66
Query 68 SYTENRYAPPPPYPAPDPFEPFAVAAVELADEGLIVLGKVVDGTLAADLKVGMEMELTTM 127
SYTENRYAPPPPYP+PDPFEPFAVAAVELADEGLIVLGKVV+GTLAADLKVGMEMELTTM
Sbjct 67 SYTENRYAPPPPYPSPDPFEPFAVAAVELADEGLIVLGKVVEGTLAADLKVGMEMELTTM 126
Query 128 PLFADDDGVQRIVYAWRIP-SRAGDDAER 155
PL+ DDDGV RIVYAWRI +R+G+ R
Sbjct 127 PLYTDDDGVDRIVYAWRIADARSGEGRAR 155
>gi|108799980|ref|YP_640177.1| hypothetical protein Mmcs_3014 [Mycobacterium sp. MCS]
gi|119869092|ref|YP_939044.1| hypothetical protein Mkms_3060 [Mycobacterium sp. KMS]
gi|108770399|gb|ABG09121.1| protein of unknown function DUF35 [Mycobacterium sp. MCS]
gi|119695181|gb|ABL92254.1| protein of unknown function DUF35 [Mycobacterium sp. KMS]
Length=146
Score = 221 bits (563), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 116/138 (85%), Positives = 124/138 (90%), Gaps = 0/138 (0%)
Query 8 EPAIDGWFTTDKAGNPHLLGGKCPQCGTYVFPPRADNCPNPACGSDTLESVGLSTRGKLW 67
+PAIDGWF TD +G +L+GGKC QCGTYVFPPRA+NCPNPAC D L V LS RGKLW
Sbjct 7 QPAIDGWFATDGSGEAYLIGGKCHQCGTYVFPPRANNCPNPACDGDDLAQVPLSRRGKLW 66
Query 68 SYTENRYAPPPPYPAPDPFEPFAVAAVELADEGLIVLGKVVDGTLAADLKVGMEMELTTM 127
SYTENRYAPPPPYP+PDPFEPFAVAAVELADEGLIVLGKVV+GTLAADLKVGMEMELTTM
Sbjct 67 SYTENRYAPPPPYPSPDPFEPFAVAAVELADEGLIVLGKVVEGTLAADLKVGMEMELTTM 126
Query 128 PLFADDDGVQRIVYAWRI 145
PL+ DDDGV RIVYAWRI
Sbjct 127 PLYTDDDGVDRIVYAWRI 144
>gi|333990441|ref|YP_004523055.1| hypothetical protein JDM601_1801 [Mycobacterium sp. JDM601]
gi|333486409|gb|AEF35801.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=175
Score = 214 bits (545), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 109/144 (76%), Positives = 122/144 (85%), Gaps = 1/144 (0%)
Query 1 VPEVTREEPAIDGWFTTDKAGNPHLLGGKCPQCGTYVFPPRADNCPNPACGSDTLESVGL 60
VP+V +PAIDGW+ TD AG PHL+G KCPQCGTYVFPPR +NCP+PAC D LE V L
Sbjct 29 VPDVA-SQPAIDGWYATDDAGLPHLIGAKCPQCGTYVFPPRENNCPSPACDGDVLEPVAL 87
Query 61 STRGKLWSYTENRYAPPPPYPAPDPFEPFAVAAVELADEGLIVLGKVVDGTLAADLKVGM 120
S RG +WSYTENRY PP PYP +PFEPFA+AAVELADEGLIVLGKVV+GTLAADLKVGM
Sbjct 88 SRRGTIWSYTENRYLPPAPYPPSEPFEPFAIAAVELADEGLIVLGKVVEGTLAADLKVGM 147
Query 121 EMELTTMPLFADDDGVQRIVYAWR 144
EMELTTMPL+ DD+GV R VYAW+
Sbjct 148 EMELTTMPLYTDDEGVTRTVYAWK 171
>gi|118470514|ref|YP_888134.1| hypothetical protein MSMEG_3843 [Mycobacterium smegmatis str.
MC2 155]
gi|118171801|gb|ABK72697.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=149
Score = 213 bits (543), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 110/137 (81%), Positives = 124/137 (91%), Gaps = 0/137 (0%)
Query 9 PAIDGWFTTDKAGNPHLLGGKCPQCGTYVFPPRADNCPNPACGSDTLESVGLSTRGKLWS 68
PAI+GW++ D++G PHL+GGKC +C TYVFPPRA+NCPNPAC D L V LS RGK+WS
Sbjct 12 PAIEGWWSADESGAPHLIGGKCTKCATYVFPPRANNCPNPACDGDELAQVPLSRRGKVWS 71
Query 69 YTENRYAPPPPYPAPDPFEPFAVAAVELADEGLIVLGKVVDGTLAADLKVGMEMELTTMP 128
YTENRYAPPPPYP+PDPFEPFAVAAVELADEGLIVLGKVV+GTLAADLKVGMEMELTTMP
Sbjct 72 YTENRYAPPPPYPSPDPFEPFAVAAVELADEGLIVLGKVVEGTLAADLKVGMEMELTTMP 131
Query 129 LFADDDGVQRIVYAWRI 145
L+ DDDGV+R+ YAWRI
Sbjct 132 LYTDDDGVERLTYAWRI 148
>gi|145224151|ref|YP_001134829.1| hypothetical protein Mflv_3567 [Mycobacterium gilvum PYR-GCK]
gi|145216637|gb|ABP46041.1| protein of unknown function DUF35 [Mycobacterium gilvum PYR-GCK]
Length=145
Score = 206 bits (525), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 108/138 (79%), Positives = 117/138 (85%), Gaps = 0/138 (0%)
Query 8 EPAIDGWFTTDKAGNPHLLGGKCPQCGTYVFPPRADNCPNPACGSDTLESVGLSTRGKLW 67
+PA+DGWFTTD++G HL+GGKC CGT VFPPR NCPNP C SD L V LS RG LW
Sbjct 6 QPAVDGWFTTDESGETHLIGGKCTGCGTLVFPPRTTNCPNPGCVSDELALVPLSRRGTLW 65
Query 68 SYTENRYAPPPPYPAPDPFEPFAVAAVELADEGLIVLGKVVDGTLAADLKVGMEMELTTM 127
SYTENRYAPPPPYP+PDPFEPFAVAAVELADEGLIVLGKVV GTLAADL VGMEMELTTM
Sbjct 66 SYTENRYAPPPPYPSPDPFEPFAVAAVELADEGLIVLGKVVAGTLAADLHVGMEMELTTM 125
Query 128 PLFADDDGVQRIVYAWRI 145
L+ DDDGV+R +AWRI
Sbjct 126 TLYVDDDGVERTTHAWRI 143
>gi|315444486|ref|YP_004077365.1| nucleic-acid-binding protein containing a Zn-ribbon [Mycobacterium
sp. Spyr1]
gi|315262789|gb|ADT99530.1| predicted nucleic-acid-binding protein containing a Zn-ribbon
[Mycobacterium sp. Spyr1]
Length=141
Score = 205 bits (522), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 107/138 (78%), Positives = 118/138 (86%), Gaps = 0/138 (0%)
Query 8 EPAIDGWFTTDKAGNPHLLGGKCPQCGTYVFPPRADNCPNPACGSDTLESVGLSTRGKLW 67
+PA+DGWFTT+++G HL+GGKC CGT VFPPR NCPNP C SD L V LS RG LW
Sbjct 2 QPAVDGWFTTNESGETHLIGGKCTGCGTLVFPPRTTNCPNPGCVSDELALVPLSRRGTLW 61
Query 68 SYTENRYAPPPPYPAPDPFEPFAVAAVELADEGLIVLGKVVDGTLAADLKVGMEMELTTM 127
SYTENRYAPPPPYP+PDPFEPFAVAAVELADEGLIVLGKVV+GTLAADL VGMEMELTTM
Sbjct 62 SYTENRYAPPPPYPSPDPFEPFAVAAVELADEGLIVLGKVVEGTLAADLHVGMEMELTTM 121
Query 128 PLFADDDGVQRIVYAWRI 145
L+ DDDGV+R +AWRI
Sbjct 122 TLYVDDDGVERTTHAWRI 139
>gi|120403846|ref|YP_953675.1| hypothetical protein Mvan_2863 [Mycobacterium vanbaalenii PYR-1]
gi|119956664|gb|ABM13669.1| protein of unknown function DUF35 [Mycobacterium vanbaalenii
PYR-1]
Length=172
Score = 202 bits (514), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 111/168 (67%), Positives = 125/168 (75%), Gaps = 27/168 (16%)
Query 5 TREEPAIDGWFTTDK---------------------------AGNPHLLGGKCPQCGTYV 37
T +PAIDGWF TD +G+P+L+GGKC +CGT+V
Sbjct 3 TSAQPAIDGWFATDGRAVDSGPDGRAVDSGPDGRAVDSATDGSGDPYLIGGKCHECGTFV 62
Query 38 FPPRADNCPNPACGSDTLESVGLSTRGKLWSYTENRYAPPPPYPAPDPFEPFAVAAVELA 97
FPPRA+NCPNP CG D L V LS RG LWSYTENRYAPPPPYP+PDPFEPFAVAAVELA
Sbjct 63 FPPRANNCPNPGCGGDELAQVPLSRRGTLWSYTENRYAPPPPYPSPDPFEPFAVAAVELA 122
Query 98 DEGLIVLGKVVDGTLAADLKVGMEMELTTMPLFADDDGVQRIVYAWRI 145
DEGLIVLGKVV+GTLAADL +GM+MELTTMPL+ DDDG +RIVYAWRI
Sbjct 123 DEGLIVLGKVVEGTLAADLTIGMQMELTTMPLYIDDDGTERIVYAWRI 170
>gi|120404339|ref|YP_954168.1| hypothetical protein Mvan_3365 [Mycobacterium vanbaalenii PYR-1]
gi|119957157|gb|ABM14162.1| protein of unknown function DUF35 [Mycobacterium vanbaalenii
PYR-1]
Length=172
Score = 202 bits (513), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 110/165 (67%), Positives = 124/165 (76%), Gaps = 27/165 (16%)
Query 8 EPAIDGWFTTDK---------------------------AGNPHLLGGKCPQCGTYVFPP 40
+PAIDGWF TD +G+P+L+GGKC +CGT+VFPP
Sbjct 6 QPAIDGWFATDGRAVDSGPDGRAVDSATDGRAVDSATDGSGDPYLIGGKCHECGTFVFPP 65
Query 41 RADNCPNPACGSDTLESVGLSTRGKLWSYTENRYAPPPPYPAPDPFEPFAVAAVELADEG 100
RA+NCPNP CG D L V LS RG LWSYTENRYAPPPPYP+PDPFEPFAVAAVELADEG
Sbjct 66 RANNCPNPGCGGDELAQVPLSRRGTLWSYTENRYAPPPPYPSPDPFEPFAVAAVELADEG 125
Query 101 LIVLGKVVDGTLAADLKVGMEMELTTMPLFADDDGVQRIVYAWRI 145
LIVLGKVV+GTLAADL +GM+MELTTMPL+ DDDG +RIVYAWRI
Sbjct 126 LIVLGKVVEGTLAADLTIGMQMELTTMPLYIDDDGTERIVYAWRI 170
>gi|169629704|ref|YP_001703353.1| hypothetical protein MAB_2618 [Mycobacterium abscessus ATCC 19977]
gi|169241671|emb|CAM62699.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=146
Score = 190 bits (483), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 96/140 (69%), Positives = 117/140 (84%), Gaps = 0/140 (0%)
Query 5 TREEPAIDGWFTTDKAGNPHLLGGKCPQCGTYVFPPRADNCPNPACGSDTLESVGLSTRG 64
T + PAIDGWF TD++G PHL+GGKC C T VFPPRA+NCPNP+C SD L+ V LS+RG
Sbjct 3 TDQAPAIDGWFDTDESGRPHLIGGKCTHCATIVFPPRANNCPNPSCDSDVLDQVPLSSRG 62
Query 65 KLWSYTENRYAPPPPYPAPDPFEPFAVAAVELADEGLIVLGKVVDGTLAADLKVGMEMEL 124
+WSYTEN+YAPPPPYPA DP+EP+A+AAVEL+ EG+IVLGKVV GT AADL+VG MEL
Sbjct 63 TVWSYTENQYAPPPPYPASDPYEPYAIAAVELSAEGIIVLGKVVTGTGAADLRVGQAMEL 122
Query 125 TTMPLFADDDGVQRIVYAWR 144
PL+ DD+GV+R+VYAW+
Sbjct 123 ALEPLYTDDEGVERLVYAWK 142
>gi|145225104|ref|YP_001135782.1| hypothetical protein Mflv_4526 [Mycobacterium gilvum PYR-GCK]
gi|315445471|ref|YP_004078350.1| nucleic-acid-binding protein containing a Zn-ribbon [Mycobacterium
sp. Spyr1]
gi|145217590|gb|ABP46994.1| protein of unknown function DUF35 [Mycobacterium gilvum PYR-GCK]
gi|315263774|gb|ADU00516.1| predicted nucleic-acid-binding protein containing a Zn-ribbon
[Mycobacterium sp. Spyr1]
Length=143
Score = 178 bits (452), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 103/137 (76%), Positives = 116/137 (85%), Gaps = 0/137 (0%)
Query 9 PAIDGWFTTDKAGNPHLLGGKCPQCGTYVFPPRADNCPNPACGSDTLESVGLSTRGKLWS 68
PA++ W+ TD++G+ +L+GGKC CGTYVFPPR +NCPNP C SD L V LS RG LWS
Sbjct 5 PAVENWWRTDESGDTYLIGGKCTGCGTYVFPPRENNCPNPGCASDELALVPLSRRGTLWS 64
Query 69 YTENRYAPPPPYPAPDPFEPFAVAAVELADEGLIVLGKVVDGTLAADLKVGMEMELTTMP 128
YTENRYAPPPPYP+PDPFEPFAVAAVELA EGLIVLGKVV+GTLAADL VGMEMELTTM
Sbjct 65 YTENRYAPPPPYPSPDPFEPFAVAAVELAAEGLIVLGKVVEGTLAADLHVGMEMELTTMT 124
Query 129 LFADDDGVQRIVYAWRI 145
L+ DDDGV R +AWRI
Sbjct 125 LYVDDDGVTRTTHAWRI 141
>gi|304312368|ref|YP_003811966.1| Probably subunit of benzoylsuccinyl-CoA thiolase [gamma proteobacterium
HdN1]
gi|301798101|emb|CBL46323.1| Probably subunit of benzoylsuccinyl-CoA thiolase [gamma proteobacterium
HdN1]
Length=160
Score = 143 bits (361), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 70/137 (52%), Positives = 89/137 (65%), Gaps = 4/137 (2%)
Query 9 PAIDGWFT-TDKAGNPHLLGGKCPQCGTYVFPPRADNCPNPACGSDTLESVGLSTRGKLW 67
P ++GWFT TD PHLLG +C CGTY FP + C NPAC S+ E V LS GK+W
Sbjct 14 PVLEGWFTHTDD--KPHLLGTQCKGCGTYYFPKQTSYCKNPACDSEHFEVVELSRTGKVW 71
Query 68 SYTENRYAPPPPYPAPDPFEPFAVAAVELADEGLIVLGKVVDGTLAADLKVGMEMELTTM 127
S+T Y PP P+ +PDPF P+ +AAVEL E +IVLG+V+ G +DLK GMEMEL
Sbjct 72 SFTNACYQPPEPFVSPDPFVPYTIAAVELEKEKMIVLGQVISGVDVSDLKAGMEMELVLD 131
Query 128 PLFADDDGVQRIVYAWR 144
LF +D Q+I + W+
Sbjct 132 TLF-EDASSQKITWKWQ 147
>gi|119715185|ref|YP_922150.1| hypothetical protein Noca_0940 [Nocardioides sp. JS614]
gi|119535846|gb|ABL80463.1| protein of unknown function DUF35 [Nocardioides sp. JS614]
Length=153
Score = 137 bits (346), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 76/151 (51%), Positives = 97/151 (65%), Gaps = 8/151 (5%)
Query 9 PAIDGWFTTDKAGNPHLLGGKCPQCGTYVFPPRADN---CPNPACGSDTLESVGLSTRGK 65
PAI+GWFT P LLG +C CGT FP A C NPAC + E LS RG
Sbjct 7 PAIEGWFTAGP--EPALLGSRCTTCGTVFFPRVAGAAAFCRNPACAGEEFEETELSRRGT 64
Query 66 LWSYTENRYAPPPPYPA-PDPFEPFAVAAVELADEGLIVLGKVVDGTLAADLKVGMEMEL 124
+WSYT+ +Y PPPPY + DP+EPFA+AAVEL EGL+VLG+V DG ADL+VG E EL
Sbjct 65 IWSYTDAQYQPPPPYLSRTDPYEPFALAAVEL-PEGLVVLGQVADGYGVADLRVGAEAEL 123
Query 125 TTMPLFADDDGVQRIVYAWRIPSRAGDDAER 155
L+ADD G R+++ W+ + G++A+R
Sbjct 124 VVETLYADDSGA-RLIWRWKPVAELGEEADR 153
>gi|254480212|ref|ZP_05093460.1| conserved domain protein, putative [marine gamma proteobacterium
HTCC2148]
gi|214039774|gb|EEB80433.1| conserved domain protein, putative [marine gamma proteobacterium
HTCC2148]
Length=144
Score = 132 bits (333), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 61/136 (45%), Positives = 83/136 (62%), Gaps = 3/136 (2%)
Query 9 PAIDGWFTTDKAGNPHLLGGKCPQCGTYVFPPRADNCPNPACGSDTLESVGLSTRGKLWS 68
PAIDGW T + PHL+G +C CG+Y FP D C NP C S + V LS G +WS
Sbjct 8 PAIDGWHTMEV--KPHLIGTRCKACGSYFFPKNNDYCRNPVCDSTDFDEVELSRTGNIWS 65
Query 69 YTENRYAPPPPYPAPDPFEPFAVAAVELADEGLIVLGKVVDGTLAADLKVGMEMELTTMP 128
YT Y PP P+ A +PFEP+ +AAV+L E +++LG+ + G DLKVGM +EL P
Sbjct 66 YTNASYKPPAPFVAAEPFEPYTIAAVQLEKEQMVILGQAIQGIGCEDLKVGMPVELVLEP 125
Query 129 LFADDDGVQRIVYAWR 144
L DD + ++ + W+
Sbjct 126 LHETDDDI-KMTWKWK 140
>gi|148556526|ref|YP_001264108.1| hypothetical protein Swit_3624 [Sphingomonas wittichii RW1]
gi|148501716|gb|ABQ69970.1| protein of unknown function DUF35 [Sphingomonas wittichii RW1]
Length=149
Score = 131 bits (329), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/136 (50%), Positives = 82/136 (61%), Gaps = 1/136 (0%)
Query 9 PAIDGWFTTDKAGNPHLLGGKCPQCGTYVFPPRADNCPNPACGSDTLESVGLSTRGKLWS 68
P +DG F G LLG +C CGTY FP A C NP C S+ ESV LS GKLWS
Sbjct 8 PVVDGLFAMGDDGL-ALLGSRCTACGTYYFPKLATFCRNPDCASEGFESVRLSRTGKLWS 66
Query 69 YTENRYAPPPPYPAPDPFEPFAVAAVELADEGLIVLGKVVDGTLAADLKVGMEMELTTMP 128
+T+ Y PP PY A DPF P+A+AAVEL E +IVLG+VVDG DL+ GMEMEL
Sbjct 67 FTDACYTPPAPYVAADPFIPYAIAAVELEREQMIVLGQVVDGVGVRDLRAGMEMELVPGT 126
Query 129 LFADDDGVQRIVYAWR 144
L + ++ + WR
Sbjct 127 LLDSGEAGEKATWKWR 142
>gi|312139909|ref|YP_004007245.1| hypothetical protein REQ_25260 [Rhodococcus equi 103S]
gi|325674210|ref|ZP_08153899.1| hypothetical protein HMPREF0724_11681 [Rhodococcus equi ATCC
33707]
gi|311889248|emb|CBH48562.1| conserved hypothetical protein [Rhodococcus equi 103S]
gi|325554890|gb|EGD24563.1| hypothetical protein HMPREF0724_11681 [Rhodococcus equi ATCC
33707]
Length=150
Score = 127 bits (320), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 71/147 (49%), Positives = 92/147 (63%), Gaps = 5/147 (3%)
Query 9 PAIDGWFTTDKAGNPHLLGGKCPQCGTYVFPPRADNCPNPACGSDTLESVGLSTRGKLWS 68
PA++GWFTT P L+G KC CGT FP C NPAC + + V LS GK+WS
Sbjct 7 PAVEGWFTTGP--EPALIGTKCRSCGTISFPRETTFCKNPACSGEEFDDVELSRFGKVWS 64
Query 69 YTENRYAPPPPY-PAPDPFEPFAVAAVELADEGLIVLGKVVDGTLAADLKVGMEMELTTM 127
YT+ +Y PP PY P DP+ PFA+AAVEL EGL+VLG+V DG ADLKVG +EL
Sbjct 65 YTDAQYKPPAPYIPTTDPYVPFALAAVELP-EGLVVLGQVADGFGVADLKVGNPVELVVE 123
Query 128 PLFADDDGVQRIVYAWRIPSRAGDDAE 154
L+ D+ G R ++ W+ + A + A+
Sbjct 124 TLYTDESG-DRSIWRWKPLAAAENGAQ 149
>gi|271970106|ref|YP_003344302.1| hypothetical protein Sros_8927 [Streptosporangium roseum DSM
43021]
gi|270513281|gb|ACZ91559.1| conserved hypothetical protein [Streptosporangium roseum DSM
43021]
Length=134
Score = 121 bits (303), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 63/121 (53%), Positives = 78/121 (65%), Gaps = 2/121 (1%)
Query 9 PAIDGWFTTDKAGNPHLLGGKCPQCGTYVFPPRADNCPNPACGSDTLESVGLSTRGKLWS 68
P IDGWFT D G HLLG +C C T FPP+ C NP C + L LS RG +WS
Sbjct 4 PVIDGWFTVDD-GTAHLLGTRCSDCRTVYFPPQTGFCRNPHCDGEDLAGTRLSRRGTVWS 62
Query 69 YTENRYAPPPPYPAPDPFEPFAVAAVELADEGLIVLGKVVDGTLAADLKVGMEMELTTMP 128
YT Y PP P+ +P+ P +AAVELA+EG++VLG+V D T+ DL+VGME+ELT P
Sbjct 63 YTNACYPPPAPFVTAEPYTPVTLAAVELAEEGIVVLGQVKDLTV-EDLRVGMELELTWGP 121
Query 129 L 129
L
Sbjct 122 L 122
>gi|226309119|ref|YP_002769079.1| hypothetical protein RER_56320 [Rhodococcus erythropolis PR4]
gi|226188236|dbj|BAH36340.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
Length=146
Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/149 (50%), Positives = 95/149 (64%), Gaps = 6/149 (4%)
Query 9 PAIDGWFTTDKAGNPHLLGGKCPQCGTYVFPPRADNCPNPACGSDTLESVGLSTRGKLWS 68
PA++GWFTT P L+G KC CGT FP A C NP+C S+ + V LS RG +WS
Sbjct 3 PAVEGWFTT--GDEPALIGTKCQSCGTISFPREATFCKNPSCFSEEFDDVELSRRGTVWS 60
Query 69 YTENRYAPPPPYPA-PDPFEPFAVAAVELADEGLIVLGKVVDGTLAADLKVGMEMELTTM 127
YT+ +Y PPPPY DP+EPFA+AAVEL EG+++LG+V DG DLKVG +EL
Sbjct 61 YTDAQYQPPPPYIPRSDPYEPFALAAVELP-EGIVILGQVADGFGVDDLKVGNTVELVVE 119
Query 128 PLFADDDGVQRIVYAWRIPSRAGDDAERS 156
PL+ D+ GV R + W+ P A D +S
Sbjct 120 PLYTDETGV-RTTWRWK-PVAAADQESQS 146
>gi|229491734|ref|ZP_04385555.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
gi|229321415|gb|EEN87215.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
Length=158
Score = 117 bits (294), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/149 (50%), Positives = 95/149 (64%), Gaps = 6/149 (4%)
Query 9 PAIDGWFTTDKAGNPHLLGGKCPQCGTYVFPPRADNCPNPACGSDTLESVGLSTRGKLWS 68
PA++GWFTT P L+G KC CGT FP A C NP+C S+ + V LS RG +WS
Sbjct 15 PAVEGWFTT--GDEPALIGTKCQSCGTISFPREATFCKNPSCFSEEFDDVELSRRGTVWS 72
Query 69 YTENRYAPPPPYPA-PDPFEPFAVAAVELADEGLIVLGKVVDGTLAADLKVGMEMELTTM 127
YT+ +Y PPPPY DP+EPFA+AAVEL EG+++LG+V DG DLKVG +EL
Sbjct 73 YTDAQYQPPPPYIPRSDPYEPFALAAVELP-EGIVILGQVADGFGVDDLKVGNTVELVVE 131
Query 128 PLFADDDGVQRIVYAWRIPSRAGDDAERS 156
PL+ D+ GV R + W+ P A D +S
Sbjct 132 PLYTDETGV-RTTWRWK-PVAAADQELQS 158
>gi|328881034|emb|CCA54273.1| hypothetical protein SVEN_0986 [Streptomyces venezuelae ATCC
10712]
Length=157
Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/141 (44%), Positives = 81/141 (58%), Gaps = 6/141 (4%)
Query 9 PAIDGWFTTDKA--GNPHLLGGKCPQCGTYVFPPRADNCPNPAC-GSDTLESVGLSTRGK 65
P + GWFT D+ LLG +C C + FP D C NP C G L V LS RG+
Sbjct 7 PVVTGWFTDDRVPEAEFRLLGTRCTACASVFFPRADDGCRNPRCPGGGELTEVPLSPRGR 66
Query 66 LWSYTENRYAPPPPYPA-PD-PFEPFAVAAVELADEGLIVLGKVVDGTLAADLKVGMEME 123
+WSYT+ RY PP PY + PD P+EP+ + AVELA E ++VLG+ G ADL +G E+E
Sbjct 67 VWSYTDGRYRPPAPYVSDPDAPWEPYTLVAVELAAEAMVVLGQAAPGVTPADLDIGTEVE 126
Query 124 LTTMPLFADDDGVQRIVYAWR 144
L L DD+ + + WR
Sbjct 127 LVPGVLNEDDEHIW-TTWNWR 146
>gi|290961942|ref|YP_003493124.1| hypothetical protein SCAB_76151 [Streptomyces scabiei 87.22]
gi|260651468|emb|CBG74590.1| CONSERVED HYPOTHETICAL PROTEIN [Streptomyces scabiei 87.22]
Length=141
Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/142 (45%), Positives = 84/142 (60%), Gaps = 5/142 (3%)
Query 11 IDGWFTTDKAGNPHLLGGKCPQCGTYVFPPRADNCPNPACGSDTLESVGLSTRGKLWSYT 70
+ GWF + G LLG +C C + FP +C NP C L V LS RG++WSYT
Sbjct 2 VAGWFAGEGEGF-RLLGTRCSACASVFFPREDVHCRNPHCSGGDLREVPLSRRGRVWSYT 60
Query 71 ENRYAPPPPYPA-PD-PFEPFAVAAVELADEGLIVLGKVVDGTLAADLKVGMEMELTTMP 128
+ RY PP PY + P+ P+EP+A+ AVELA+E L+VLG+ V G ADL VGME+E+
Sbjct 61 DGRYRPPSPYVSDPELPWEPYALIAVELAEERLVVLGQAVPGVTVADLAVGMEVEVVPGV 120
Query 129 LFADDDGVQRIVYAWRIPSRAG 150
L D + + WR P+ AG
Sbjct 121 LHEDAEATW-TTWHWR-PTGAG 140
>gi|29833509|ref|NP_828143.1| hypothetical protein SAV_6967 [Streptomyces avermitilis MA-4680]
gi|29610632|dbj|BAC74678.1| hypothetical protein [Streptomyces avermitilis MA-4680]
Length=148
Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/139 (44%), Positives = 79/139 (57%), Gaps = 6/139 (4%)
Query 9 PAIDGWFTTDKAGNPHLLGGKCPQCGTYVFPPRADNCPNPACGSDTLESVGLSTRGKLWS 68
P + GWF D + LLG +C C + FP +C NP C L V LS RG++WS
Sbjct 7 PVVSGWFAGD-GNDFRLLGTRCSACASVFFPREDAHCRNPGCPGGELAEVALSGRGRVWS 65
Query 69 YTENRYAPPPPYPAPDP---FEPFAVAAVELADEGLIVLGKVVDGTLAADLKVGMEMELT 125
YT++RY PP PY DP +EP A+ AVELA E ++VLG+ V G ADL VGME+E+
Sbjct 66 YTDSRYRPPSPY-VTDPELSWEPRALIAVELAAERIVVLGQSVPGVTVADLTVGMEVEVV 124
Query 126 TMPLFADDDGVQRIVYAWR 144
+ +D G + WR
Sbjct 125 P-GVLNEDAGTTWTTWHWR 142
>gi|302533245|ref|ZP_07285587.1| conserved hypothetical protein [Streptomyces sp. C]
gi|302442140|gb|EFL13956.1| conserved hypothetical protein [Streptomyces sp. C]
Length=151
Score = 106 bits (265), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 60/140 (43%), Positives = 82/140 (59%), Gaps = 5/140 (3%)
Query 9 PAIDGWFTTDKAGNP-HLLGGKCPQCGTYVFPPRADNCPNPAC-GSDTLESVGLSTRGKL 66
P + GWFT +AG+ LLG +C C + FP C NP C G L V LS RG++
Sbjct 7 PVVSGWFTGTEAGDGFRLLGTRCSACASVFFPREDAYCRNPHCAGGGELAEVPLSPRGRI 66
Query 67 WSYTENRYAPPPPYPA-PD-PFEPFAVAAVELADEGLIVLGKVVDGTLAADLKVGMEMEL 124
WSYT+ RY PP PY + PD P+EP+ + AVEL E ++VLG+ G ADL VGME+E+
Sbjct 67 WSYTDGRYRPPAPYVSDPDAPWEPYTLVAVELEAERMVVLGQAAPGVTPADLAVGMEVEV 126
Query 125 TTMPLFADDDGVQRIVYAWR 144
+ +D G R + ++
Sbjct 127 VEG-VLGEDSGAARTTWRFK 145
>gi|302540696|ref|ZP_07293038.1| conserved hypothetical protein [Streptomyces hygroscopicus ATCC
53653]
gi|302458314|gb|EFL21407.1| conserved hypothetical protein [Streptomyces himastatinicus ATCC
53653]
Length=153
Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/151 (42%), Positives = 85/151 (57%), Gaps = 7/151 (4%)
Query 9 PAIDGWFTTDKAGNPHLLGGKCPQCGTYVFPPRADNCPNPACGSDTLESVGLSTRGKLWS 68
P + GWFT+ G+ LLG +C CG FP C P C + L+ V LS RG++WS
Sbjct 7 PVVAGWFTSGD-GDFRLLGTRCRACGAVYFPREDTFCRAPRCAGEELDEVPLSRRGRVWS 65
Query 69 YTENRYAPPPPYPAPDP---FEPFAVAAVELADEGLIVLGKVVDGTLAADLKVGMEMELT 125
YT+ RY PP PYP+ DP + P+ + AVELA E ++VLG+ G ADL VGME+E+
Sbjct 66 YTDGRYRPPAPYPS-DPARDWAPYTLIAVELAAERMVVLGQGAPGVTVADLAVGMEVEVV 124
Query 126 TMPLFADDDGVQRIVYAWRIPSRAGDDAERS 156
+ A + G + W +P A D E S
Sbjct 125 PG-VLAGEGGQSWTTWHW-LPVPAEDVEESS 153
>gi|239986330|ref|ZP_04706994.1| hypothetical protein SrosN1_03386 [Streptomyces roseosporus NRRL
11379]
gi|291443276|ref|ZP_06582666.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
15998]
gi|291346223|gb|EFE73127.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
15998]
Length=147
Score = 103 bits (257), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 62/145 (43%), Positives = 80/145 (56%), Gaps = 8/145 (5%)
Query 13 GWFTTDKAG-NPHLLGGKCPQCGTYVFPPRADNCPNPACGSDTLESVGLSTRGKLWSYTE 71
GWFT D A + LLG +C C T FP D+C NP C LE LS RG +WS T+
Sbjct 3 GWFTEDAAEEDFRLLGTRCSGCRTVHFPREDDHCRNPGCSGGELEETPLSKRGTVWSCTD 62
Query 72 NRYAPPPPYPAPD--PFEPFAVAAVELADEGLIVLGKVVDGTLAADLKVGMEMELTTMPL 129
RY PPPPY + P+ P+ + AVELA E ++VLG+ G ADL VG E+E+ +P
Sbjct 63 GRYRPPPPYVSDHDVPWTPYTLVAVELAAERMVVLGQAAPGVGVADLPVGSEVEV--VPG 120
Query 130 FADDD---GVQRIVYAWRIPSRAGD 151
D+D G + WR + GD
Sbjct 121 VLDEDRATGTVHTTWHWRPVAADGD 145
>gi|297198234|ref|ZP_06915631.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
gi|197709847|gb|EDY53881.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
Length=148
Score = 103 bits (257), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 58/140 (42%), Positives = 78/140 (56%), Gaps = 4/140 (2%)
Query 7 EEPAIDGWFTTDKAGNPHLLGGKCPQCGTYVFPPRADNCPNPACGSDTLESVGLSTRGKL 66
P + GWF D + LLG +C C + FP C NP C L + LS RG++
Sbjct 5 HTPVVAGWFAGD-GDDFTLLGTRCSACASVFFPREDGWCRNPGCAGGDLAEIPLSRRGRV 63
Query 67 WSYTENRYAPPPPYPA-PD-PFEPFAVAAVELADEGLIVLGKVVDGTLAADLKVGMEMEL 124
WSYT++RY PP PY P+ P+EP+ + AVELA E ++VLG+ V G ADL VG E+E+
Sbjct 64 WSYTDSRYRPPSPYVTDPELPWEPYTLIAVELAAERIVVLGQAVPGVTVADLAVGAEVEV 123
Query 125 TTMPLFADDDGVQRIVYAWR 144
L D + V + WR
Sbjct 124 VAGVLHEDGETVW-TTWQWR 142
>gi|345013144|ref|YP_004815498.1| hypothetical protein Strvi_5707 [Streptomyces violaceusniger
Tu 4113]
gi|344039493|gb|AEM85218.1| protein of unknown function DUF35 [Streptomyces violaceusniger
Tu 4113]
Length=149
Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/138 (41%), Positives = 76/138 (56%), Gaps = 4/138 (2%)
Query 9 PAIDGWFTTDKAGNPHLLGGKCPQCGTYVFPPRADNCPNPACGSDTLESVGLSTRGKLWS 68
P +DGWF+++ G LLG C CG FP C P C L V LS RG++WS
Sbjct 7 PVVDGWFSSE-GGEFRLLGTCCRGCGAVYFPREDVFCRAPGCAGTELAEVPLSRRGRVWS 65
Query 69 YTENRYAPPPPYPA--PDPFEPFAVAAVELADEGLIVLGKVVDGTLAADLKVGMEMELTT 126
YT+ RY PP PYP+ + P+ + AVELA E ++VLG+ G ADL VGME+E+
Sbjct 66 YTDGRYRPPAPYPSGPEGEWRPYTLIAVELAAERMVVLGQGAPGVTVADLAVGMEVEVVP 125
Query 127 MPLFADDDGVQRIVYAWR 144
+ ++ G + WR
Sbjct 126 G-VLGEEGGRTLTTWHWR 142
>gi|297155401|gb|ADI05113.1| hypothetical protein SBI_01992 [Streptomyces bingchenggensis
BCW-1]
Length=152
Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 86/150 (58%), Gaps = 6/150 (4%)
Query 9 PAIDGWFTTDKAGNPHLLGGKCPQCGTYVFPPRADNCPNPACGSDTLESVGLSTRGKLWS 68
P + GWFTT+ LLG +C CG+ FP C +P C S L+ LS RG++WS
Sbjct 7 PLVPGWFTTE-GEEFRLLGTRCRVCGSVFFPREDSFCRSPDCASTELDEAPLSRRGRVWS 65
Query 69 YTENRYAPPPPYPA-PDP-FEPFAVAAVELADEGLIVLGKVVDGTLAADLKVGMEMELTT 126
YT+ RY PP PY + PD ++P+ + AVELA E ++VLG+ G ADL VGME+E
Sbjct 66 YTDGRYRPPAPYVSDPDAEWQPYTLIAVELAAERMVVLGQGAPGVTLADLAVGMEVEAVP 125
Query 127 MPLFADDDGVQRIVYAWRIPSRAGDDAERS 156
L D + + + WR P +G + ERS
Sbjct 126 GVLSEDAEHIW-TTWNWR-PVTSGSE-ERS 152
>gi|182439924|ref|YP_001827643.1| hypothetical protein SGR_6131 [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|178468440|dbj|BAG22960.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus
NBRC 13350]
Length=156
Score = 100 bits (249), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/142 (43%), Positives = 78/142 (55%), Gaps = 8/142 (5%)
Query 9 PAIDGWFTTDKAG-NPHLLGGKCPQCGTYVFPPRADNCPNPACGSDTLESVGLSTRGKLW 67
P + GWFT D A + LLG +C C + FP C NP C LE V LS RG +W
Sbjct 7 PVVAGWFTEDAAEEDFRLLGTRCSACRSVHFPREDGRCRNPGCPGGELEEVPLSKRGTVW 66
Query 68 SYTENRYAPPPPYPA--PDPFEPFAVAAVELADEGLIVLGKVVDGTLAADLKVGMEMELT 125
S T+ RY PPPPY + P+ P+ + AVELA E ++VLG+ G ADL VG +E+
Sbjct 67 SCTDGRYRPPPPYVSDPEAPWTPYTLVAVELAAERMVVLGQAAPGVGVADLPVGSAVEV- 125
Query 126 TMPLFADD---DGVQRIVYAWR 144
+P D+ GV R + WR
Sbjct 126 -VPGVLDEGRASGVVRTTWHWR 146
>gi|326780591|ref|ZP_08239856.1| protein of unknown function DUF35 [Streptomyces cf. griseus XylebKG-1]
gi|326660924|gb|EGE45770.1| protein of unknown function DUF35 [Streptomyces griseus XylebKG-1]
Length=156
Score = 100 bits (249), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/142 (43%), Positives = 78/142 (55%), Gaps = 8/142 (5%)
Query 9 PAIDGWFTTDKA-GNPHLLGGKCPQCGTYVFPPRADNCPNPACGSDTLESVGLSTRGKLW 67
P + GWFT D A + LLG +C C + FP C NP C LE V LS RG +W
Sbjct 7 PVVAGWFTEDAAEKDFRLLGTRCSGCRSVHFPREDGRCRNPGCPGGELEEVPLSKRGTVW 66
Query 68 SYTENRYAPPPPYPA--PDPFEPFAVAAVELADEGLIVLGKVVDGTLAADLKVGMEMELT 125
S T+ RY PPPPY + P+ P+ + AVELA E ++VLG+ G ADL VG +E+
Sbjct 67 SCTDGRYRPPPPYVSDPEAPWTPYTLVAVELAAERMVVLGQAAPGVGVADLPVGSAVEV- 125
Query 126 TMPLFADD---DGVQRIVYAWR 144
+P D+ GV R + WR
Sbjct 126 -VPGVLDEGRASGVVRTTWHWR 146
>gi|294811463|ref|ZP_06770106.1| DUF35 domain-containing protein [Streptomyces clavuligerus ATCC
27064]
gi|326439969|ref|ZP_08214703.1| hypothetical protein SclaA2_02835 [Streptomyces clavuligerus
ATCC 27064]
gi|294324062|gb|EFG05705.1| DUF35 domain-containing protein [Streptomyces clavuligerus ATCC
27064]
Length=170
Score = 84.0 bits (206), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/132 (44%), Positives = 72/132 (55%), Gaps = 5/132 (3%)
Query 9 PAIDGWFTTDKAGNPHLLGGKCPQCGTYVFPPRADNCPNPACGSDTLESVGLSTRGKLWS 68
P + GWF D LLG +C C FP D C NP C L V LS RG +WS
Sbjct 5 PVVAGWFAQDDETGFRLLGTRCTGCAAVSFPREEDFCRNPDCPGGELAEVPLSRRGTIWS 64
Query 69 YTENRYAPPPPYPAPD--PFEPFAVAAVELADEGLIVLGKVVDGTLAADLKVGMEMELTT 126
YT+ RY PPPPYP +EP+ + AVELA E ++VLG+ G ADL VGM +E+
Sbjct 65 YTDGRYRPPPPYPGDPGAEWEPYVLIAVELAAERMVVLGQAAPGVSLADLAVGMAVEVVP 124
Query 127 MPLFAD---DDG 135
L+ + DDG
Sbjct 125 GVLYEEHRKDDG 136
>gi|291441639|ref|ZP_06581029.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC
14672]
gi|291344534|gb|EFE71490.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC
14672]
Length=145
Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/133 (37%), Positives = 69/133 (52%), Gaps = 5/133 (3%)
Query 11 IDGWFTTDKAGNPHLLGGKCPQCGTYVFPPRADNCPNPACGSDTLESVGLSTRGKLWSYT 70
+D TD L+G +C CG + FP R D CP C +++ V LS G LWS+T
Sbjct 10 VDDSLFTDTPDGVALVGSRCAGCGAHTFP-RQDGCPR--CTGASMQDVPLSRTGTLWSFT 66
Query 71 ENRYAPPPPYPAPDPFEPFAVAAVELADEGLIVLGKVVDGTLAADLKVGMEMELTTMPLF 130
+ P PPY P FEP+ V VEL + +IV ++ + L++GM M L +P
Sbjct 67 VQGFRPKPPYAGPPEFEPYGVGYVELPGQ-VIVEARLTEND-PDRLRIGMPMVLEMVPFR 124
Query 131 ADDDGVQRIVYAW 143
ADD G + +A+
Sbjct 125 ADDAGTPVLTFAF 137
>gi|119504558|ref|ZP_01626637.1| hypothetical protein MGP2080_13168 [marine gamma proteobacterium
HTCC2080]
gi|119459580|gb|EAW40676.1| hypothetical protein MGP2080_13168 [marine gamma proteobacterium
HTCC2080]
Length=143
Score = 81.6 bits (200), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/124 (38%), Positives = 71/124 (58%), Gaps = 8/124 (6%)
Query 24 HLLGGKCPQCGTYVFPPRADNCPNPACGSDTLESVGLSTRGKLWSYTENRYAPPPPY--- 80
LLG +C CG + FP + D+C ACGS+ E V L GKLW++T + P PY
Sbjct 20 QLLGSRCKDCGEHAFPSQ-DSCR--ACGSERTEVVKLGNAGKLWTWTIQSFMPKAPYLTD 76
Query 81 PAPDPFEPFAVAAVELADEGLIVLGKVVDGTLAADLKVGMEMELTTMPLFADDDGVQRIV 140
P+ F P+ V VELA G+ V ++ + + A L++G+ MEL +P+ D++G Q +
Sbjct 77 ETPETFRPYGVGYVELAC-GIKVESRLHENS-ANSLRIGLPMELEIVPVRIDENGSQLMT 134
Query 141 YAWR 144
+ +R
Sbjct 135 FQFR 138
>gi|325002860|ref|ZP_08123972.1| hypothetical protein PseP1_29035 [Pseudonocardia sp. P1]
Length=141
Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/133 (35%), Positives = 66/133 (50%), Gaps = 5/133 (3%)
Query 11 IDGWFTTDKAGNPHLLGGKCPQCGTYVFPPRADNCPNPACGSDTLESVGLSTRGKLWSYT 70
+D + A P LLG +C C Y FP + CP C ++ V LS G LWS+T
Sbjct 8 VDDALFVETADGPALLGSRCADCAAYTFPVQG-GCPR--CTGSSMTPVPLSRTGTLWSWT 64
Query 71 ENRYAPPPPYPAPDPFEPFAVAAVELADEGLIVLGKVVDGTLAADLKVGMEMELTTMPLF 130
+ P PPY + +EPF V VEL G +++ + GT A+L +GM +EL P
Sbjct 65 VQGFRPKPPYTGTEAYEPFGVGYVEL--PGQLIVEARLTGTDPAELAIGMAVELVLTPFR 122
Query 131 ADDDGVQRIVYAW 143
D+ G +A+
Sbjct 123 DDESGRHVHTFAF 135
>gi|297204591|ref|ZP_06921988.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
gi|197710658|gb|EDY54692.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
Length=152
Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/142 (36%), Positives = 74/142 (53%), Gaps = 7/142 (4%)
Query 4 VTREEPAIDGWFTTDKAGNP-HLLGGKCPQCGTYVFPPRADNCPNPACGSDTLESVGLST 62
T + P +G FT A P L+G +C CG FP A C C SD + L+
Sbjct 2 TTTQRPVAEGLFTWPPAAAPLRLIGSECRVCGLVSFP-AAATCVR--CASDESKERLLAD 58
Query 63 RGKLWSYTENRYAPP-PPYPAPDPFEPFAVAAVELADEGLIVLGKVVDGTLAADLKVGME 121
RG LW+YT + PP PPY P+ FEP+AV +EL E L++ ++ + L++G
Sbjct 59 RGTLWTYTTQNFRPPSPPYDGPEAFEPYAVGYIELPGE-LLIEARLTEPD-PDKLRIGQT 116
Query 122 MELTTMPLFADDDGVQRIVYAW 143
M LT +P DDG + + +A+
Sbjct 117 MLLTLVPYTVRDDGTEIVTFAF 138
>gi|118473081|ref|YP_889034.1| hypothetical protein MSMEG_4777 [Mycobacterium smegmatis str.
MC2 155]
gi|118174368|gb|ABK75264.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=143
Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/129 (38%), Positives = 71/129 (56%), Gaps = 11/129 (8%)
Query 22 NPHLLGGKCPQCGTYVFPPRADNCPNPACGSDTLESVGLSTRGKLWSYTENRYAPPPPYP 81
NP L+G +C CG+YVFP + D+CP C S V L RG + ++T + P PY
Sbjct 18 NPQLIGSRCDTCGSYVFPVQ-DHCPR--CSSADTSEVLLPRRGTVVAWTTQGFPPGAPYA 74
Query 82 AP--DPFEPFAVAAVELADEGLIVLGKVVDGTLAAD----LKVGMEMELTTMPLFADDDG 135
P F PF V VELADE V+ V+G L + L+ G ++ELT +P DD+G
Sbjct 75 GPTGKDFVPFGVGLVELADETGPVIR--VEGRLTENDPDKLEFGQQVELTMIPFTTDDEG 132
Query 136 VQRIVYAWR 144
+ + +A++
Sbjct 133 NEVVTFAFQ 141
>gi|158315694|ref|YP_001508202.1| hypothetical protein Franean1_3906 [Frankia sp. EAN1pec]
gi|158111099|gb|ABW13296.1| protein of unknown function DUF35 [Frankia sp. EAN1pec]
Length=143
Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/139 (35%), Positives = 70/139 (51%), Gaps = 17/139 (12%)
Query 20 AGNPHLLGGKCPQCGTYVFPPRADNCPNPACGSDTLESVGLSTRGKLWSYTENRYAPPPP 79
A P L+G +C C FP + D+CP CG +E L G LW++T + P P
Sbjct 15 AEKPQLIGARCRSCAAVTFPAQ-DSCPR--CGKLEMEQRLLPREGTLWTWTTQEFLPKEP 71
Query 80 YPA---PDPFEPFAVAAVELAD----EGLIVLGKVVDGTLAADLKVGMEMELTTMPLFAD 132
Y + P+ F+PFAV V+L D EG + + K +++ GM +EL P D
Sbjct 72 YASGETPETFKPFAVGLVQLGDDVRVEGRLTVSK------PDEIRFGMGLELVIYPFRTD 125
Query 133 DDGVQRIVYAWRIPSRAGD 151
+DG Q + YA+ PS G+
Sbjct 126 EDGTQVLSYAF-APSEGGN 143
>gi|312199236|ref|YP_004019297.1| hypothetical protein FraEuI1c_5440 [Frankia sp. EuI1c]
gi|311230572|gb|ADP83427.1| protein of unknown function DUF35 [Frankia sp. EuI1c]
Length=147
Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/130 (37%), Positives = 65/130 (50%), Gaps = 16/130 (12%)
Query 22 NPHLLGGKCPQCGTYVFPPRADNCPNPACGSDTLESVGLSTRGKLWSYTENRYAPP-PPY 80
P L+G KC CG FP NCP CGS LSTRG LW++T R+ P PPY
Sbjct 22 EPRLIGSKCQVCGLVAFPAYP-NCPR--CGSLDTAQTRLSTRGTLWTWTRQRFQPKNPPY 78
Query 81 PAPDP---FEPFAVAAVELAD---EGLIVLGKVVDGTLAADLKVGMEMELTTMPLFADDD 134
+P F + V VEL + E + +G + L++G EMEL +P D D
Sbjct 79 LGTEPAADFVGYGVGYVELPEARIEARLAVG------VDEPLEIGQEMELVVVPFATDAD 132
Query 135 GVQRIVYAWR 144
G + + +A+R
Sbjct 133 GTEVLTFAFR 142
>gi|288916558|ref|ZP_06410934.1| protein of unknown function DUF35 [Frankia sp. EUN1f]
gi|288351989|gb|EFC86190.1| protein of unknown function DUF35 [Frankia sp. EUN1f]
Length=143
Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/131 (33%), Positives = 64/131 (49%), Gaps = 16/131 (12%)
Query 20 AGNPHLLGGKCPQCGTYVFPPRADNCPNPACGSDTLESVGLSTRGKLWSYTENRYAPPPP 79
A P L+G +C C FP + D+CP CG +E + L G LW++T + P P
Sbjct 15 AEKPQLIGARCASCAAVTFPAQ-DSCPR--CGKLEMEQLLLPREGTLWTWTTQDFLPKEP 71
Query 80 YPA---PDPFEPFAVAAVELADEGLIVLGKVVDGTLAA----DLKVGMEMELTTMPLFAD 132
Y + P F+PF + V+L D+ V+G L ++ GM++EL P D
Sbjct 72 YASGETPQTFKPFGMGLVQLGDD------VRVEGRLTVSDPKQIRFGMKLELVIYPFRTD 125
Query 133 DDGVQRIVYAW 143
DG Q + YA+
Sbjct 126 GDGTQVMSYAF 136
>gi|119718351|ref|YP_925316.1| hypothetical protein Noca_4132 [Nocardioides sp. JS614]
gi|119539012|gb|ABL83629.1| protein of unknown function DUF35 [Nocardioides sp. JS614]
Length=149
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/134 (33%), Positives = 66/134 (50%), Gaps = 6/134 (4%)
Query 19 KAGNPHLLGGKCPQCGTYVFPPRADNCPNPACGSDTLESVGLSTRGKLWSYTENRYAPPP 78
G P LLG +C CGT FP R D CP CG ++ V L G +WS T + P P
Sbjct 21 HGGVPSLLGSRCADCGTTTFP-RQDGCPR--CGGASMPEVVLPREGTIWSATVQHFEPKP 77
Query 79 PYPAPDPFEPFAVAAVELADEGLIVLGKVVDGTLAADLKVGMEMELTTMPLFADDDGVQR 138
P+ + PF + V+L + +IV+ + + A L +G + L +P + D+DG +
Sbjct 78 PFRHDGEYVPFGMGYVDLGE--VIVVARFTEND-PARLGIGTPVALCAVPAWTDEDGTRV 134
Query 139 IVYAWRIPSRAGDD 152
+ Y + AG +
Sbjct 135 LTYGFAPTGAAGQE 148
>gi|302383134|ref|YP_003818957.1| hypothetical protein Bresu_2023 [Brevundimonas subvibrioides
ATCC 15264]
gi|302193762|gb|ADL01334.1| protein of unknown function DUF35 [Brevundimonas subvibrioides
ATCC 15264]
Length=143
Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/121 (36%), Positives = 73/121 (61%), Gaps = 6/121 (4%)
Query 23 PHLLGGKCPQCGTYVFPPRADNCPNPACGSDTLESVGLSTRGKLWSYTENRYAPPPPYPA 82
P LLG +C CG+ +P R +C NP C + ++ RG+L+S+T RY PP + A
Sbjct 21 PALLGTRCGDCGSLYYP-RVVSCRNPECQDKRVVPARIAGRGRLYSFTIQRYRPPALF-A 78
Query 83 PDPFEPFAVAAVELADEGLIVLGKVVDGTLAADLKVGMEMELTTMPLFADDDGVQRIVYA 142
+P++P+A+ V++ D GL V+G +VD DL++GM + L+T+ + DD G + ++
Sbjct 79 LEPWQPYALGLVDVED-GLRVMG-IVDAP-PDDLRIGMPLRLSTL-VVNDDAGTAVVTHS 134
Query 143 W 143
+
Sbjct 135 F 135
>gi|146275781|ref|YP_001165941.1| hypothetical protein Saro_3555 [Novosphingobium aromaticivorans
DSM 12444]
gi|145322472|gb|ABP64415.1| hypothetical protein Saro_3555 [Novosphingobium aromaticivorans
DSM 12444]
Length=132
Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/123 (43%), Positives = 67/123 (55%), Gaps = 16/123 (13%)
Query 12 DGWFTTDKAGNP-HLLGGKCPQCGTYVFPPRADNCPNPACGSDTLESVGLSTRGKLWSYT 70
+G FT GNP HL+GG+ + G VFP CP D E V LS G LWSYT
Sbjct 6 EGLFTD---GNPPHLIGGRERESGRVVFP-----CPP----GDRYEPVALSRTGTLWSYT 53
Query 71 ENRYAP-PPPYPAPDPFEPFAVAAVELADEGLIVLGKVVDGTLAADLKVGMEMELTTMPL 129
RY P PPY P+ F P+ V VEL E +IV ++ + D+++GM +ELT +PL
Sbjct 54 IQRYRPKSPPYAGPEAFRPWPVGYVELPGE-VIVEARLANVAF-EDIRIGMPLELTLVPL 111
Query 130 FAD 132
D
Sbjct 112 DPD 114
>gi|120405092|ref|YP_954921.1| hypothetical protein Mvan_4138 [Mycobacterium vanbaalenii PYR-1]
gi|119957910|gb|ABM14915.1| protein of unknown function DUF35 [Mycobacterium vanbaalenii
PYR-1]
Length=146
Score = 70.5 bits (171), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/138 (35%), Positives = 68/138 (50%), Gaps = 11/138 (7%)
Query 9 PAIDGWFTTDKAGNPHLLGGKCPQCGTYVFPPRADNCPNPACGSDTLESVGLSTRGKLWS 68
P I W A +P L+G C CG FP + CP C + V L RG L +
Sbjct 14 PEISTW----PADDPQLIGSSCGTCGATTFPVQ-QRCPK--CSGGEMSEVLLPRRGTLIA 66
Query 69 YTENRYAPPPPYPAP--DPFEPFAVAAVELADEGLIVLGKVVDGTLAADLKVGMEMELTT 126
+T + P PY P F PF V V+L D+ + V G++ + A LK G ++ELT
Sbjct 67 WTTQGFPPGAPYKGPTGKDFVPFGVGLVQL-DDVIRVEGRLTEND-PAKLKFGEQVELTM 124
Query 127 MPLFADDDGVQRIVYAWR 144
+P D+DG + + +A+R
Sbjct 125 LPFTTDEDGTEVVTFAFR 142
Lambda K H
0.316 0.137 0.435
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 129924364284
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40