BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1629 Length=904 Score E Sequences producing significant alignments: (Bits) Value gi|15608767|ref|NP_216145.1| DNA polymerase I [Mycobacterium tub... 1810 0.0 gi|289554597|ref|ZP_06443807.1| DNA polymerase I polA [Mycobacte... 1809 0.0 gi|289750174|ref|ZP_06509552.1| DNA polymerase I polA [Mycobacte... 1808 0.0 gi|339631685|ref|YP_004723327.1| DNA polymerase I [Mycobacterium... 1808 0.0 gi|344219449|gb|AEN00080.1| DNA polymerase I [Mycobacterium tube... 1806 0.0 gi|289443081|ref|ZP_06432825.1| DNA polymerase I polA [Mycobacte... 1806 0.0 gi|289745934|ref|ZP_06505312.1| DNA polymerase I polA [Mycobacte... 1803 0.0 gi|340626634|ref|YP_004745086.1| putative DNA polymerase I POLA ... 1795 0.0 gi|240168007|ref|ZP_04746666.1| DNA polymerase I [Mycobacterium ... 1620 0.0 gi|254550633|ref|ZP_05141080.1| DNA polymerase I [Mycobacterium ... 1599 0.0 gi|296164498|ref|ZP_06847069.1| DNA-directed DNA polymerase I [M... 1580 0.0 gi|183982446|ref|YP_001850737.1| DNA polymerase I PolA [Mycobact... 1577 0.0 gi|342860799|ref|ZP_08717449.1| DNA polymerase I [Mycobacterium ... 1567 0.0 gi|118617251|ref|YP_905583.1| DNA polymerase I [Mycobacterium ul... 1567 0.0 gi|118462804|ref|YP_882339.1| DNA polymerase I [Mycobacterium av... 1565 0.0 gi|336457772|gb|EGO36766.1| DNA polymerase I [Mycobacterium aviu... 1565 0.0 gi|41407420|ref|NP_960256.1| DNA polymerase I [Mycobacterium avi... 1564 0.0 gi|254775605|ref|ZP_05217121.1| DNA polymerase I [Mycobacterium ... 1564 0.0 gi|254820981|ref|ZP_05225982.1| DNA polymerase I [Mycobacterium ... 1557 0.0 gi|467163|gb|AAA50927.1| polI [Mycobacterium leprae] 1531 0.0 gi|15827719|ref|NP_301982.1| DNA polymerase I [Mycobacterium lep... 1531 0.0 gi|145224148|ref|YP_001134826.1| DNA polymerase I [Mycobacterium... 1526 0.0 gi|315444483|ref|YP_004077362.1| DNA polymerase I [Mycobacterium... 1525 0.0 gi|120404335|ref|YP_954164.1| DNA polymerase I [Mycobacterium va... 1524 0.0 gi|333990442|ref|YP_004523056.1| DNA polymerase I PolA [Mycobact... 1501 0.0 gi|118469541|ref|YP_888130.1| DNA polymerase I [Mycobacterium sm... 1490 0.0 gi|108799977|ref|YP_640174.1| DNA polymerase I [Mycobacterium sp... 1484 0.0 gi|126435605|ref|YP_001071296.1| DNA polymerase I [Mycobacterium... 1470 0.0 gi|169629701|ref|YP_001703350.1| DNA polymerase I [Mycobacterium... 1444 0.0 gi|54023843|ref|YP_118085.1| DNA polymerase I [Nocardia farcinic... 1370 0.0 gi|12001920|gb|AAG43103.1|AF038543_1 DNA polymerase I [Rhodococc... 1341 0.0 gi|226360133|ref|YP_002777911.1| DNA polymerase I [Rhodococcus o... 1340 0.0 gi|111018004|ref|YP_700976.1| DNA polymerase I [Rhodococcus jost... 1332 0.0 gi|226306809|ref|YP_002766769.1| DNA polymerase I [Rhodococcus e... 1327 0.0 gi|229492694|ref|ZP_04386495.1| DNA polymerase I family protein ... 1323 0.0 gi|333919148|ref|YP_004492729.1| DNA polymerase I [Amycolicicocc... 1314 0.0 gi|325674214|ref|ZP_08153903.1| DNA-directed DNA polymerase I [R... 1295 0.0 gi|312139906|ref|YP_004007242.1| DNA polymerase i pola1 [Rhodoco... 1287 0.0 gi|291007053|ref|ZP_06565026.1| DNA polymerase I [Saccharopolysp... 1242 0.0 gi|134101936|ref|YP_001107597.1| DNA polymerase I [Saccharopolys... 1242 0.0 gi|343927498|ref|ZP_08766969.1| DNA polymerase I [Gordonia alkan... 1239 0.0 gi|302528122|ref|ZP_07280464.1| DNA polymerase I [Streptomyces s... 1208 0.0 gi|257056582|ref|YP_003134414.1| DNA polymerase I [Saccharomonos... 1197 0.0 gi|296140146|ref|YP_003647389.1| DNA polymerase I [Tsukamurella ... 1195 0.0 gi|326382644|ref|ZP_08204335.1| DNA polymerase I [Gordonia neofe... 1189 0.0 gi|340529562|gb|AEK44767.1| DNA polymerase I [Amycolatopsis medi... 1178 0.0 gi|331697374|ref|YP_004333613.1| DNA polymerase I [Pseudonocardi... 1172 0.0 gi|300787986|ref|YP_003768277.1| DNA polymerase I [Amycolatopsis... 1163 0.0 gi|296395192|ref|YP_003660076.1| DNA polymerase I [Segniliparus ... 1144 0.0 gi|317509158|ref|ZP_07966782.1| DNA polymerase I [Segniliparus r... 1139 0.0 >gi|15608767|ref|NP_216145.1| DNA polymerase I [Mycobacterium tuberculosis H37Rv] gi|15841084|ref|NP_336121.1| DNA polymerase I [Mycobacterium tuberculosis CDC1551] gi|31792815|ref|NP_855308.1| DNA polymerase I [Mycobacterium bovis AF2122/97] 56 more sequence titles Length=904 Score = 1810 bits (4687), Expect = 0.0, Method: Compositional matrix adjust. Identities = 903/904 (99%), Positives = 904/904 (100%), Gaps = 0/904 (0%) Query 1 VVTTASAPSEDRAKPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLL 60 +VTTASAPSEDRAKPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLL Sbjct 1 MVTTASAPSEDRAKPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLL 60 Query 61 RDEAPTHIAAAFDVSRQTFRLQRYPEYKANRSSTPDEFAGQIDITKEVLGALGITVLSEP 120 RDEAPTHIAAAFDVSRQTFRLQRYPEYKANRSSTPDEFAGQIDITKEVLGALGITVLSEP Sbjct 61 RDEAPTHIAAAFDVSRQTFRLQRYPEYKANRSSTPDEFAGQIDITKEVLGALGITVLSEP 120 Query 121 GFEADDLIATLATQAENEGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVV 180 GFEADDLIATLATQAENEGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVV Sbjct 121 GFEADDLIATLATQAENEGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVV 180 Query 181 EKYGLTPRQYPDFAALRGDPSDNLPGIPGVGEKTAAKWIAEYGSLRSLVDNVDAVRGKVG 240 EKYGLTPRQYPDFAALRGDPSDNLPGIPGVGEKTAAKWIAEYGSLRSLVDNVDAVRGKVG Sbjct 181 EKYGLTPRQYPDFAALRGDPSDNLPGIPGVGEKTAAKWIAEYGSLRSLVDNVDAVRGKVG 240 Query 241 DALRANLASVVRNRELTDLVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFD 300 DALRANLASVVRNRELTDLVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFD Sbjct 241 DALRANLASVVRNRELTDLVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFD 300 Query 301 TLAAAGGPEVDEGFDVRGGALAPGTVRQWLAEHAGDGRRAGLTVVGTHLPHGGDATAMAV 360 TLAAAGGPEVDEGFDVRGGALAPGTVRQWLAEHAGDGRRAGLTVVGTHLPHGGDATAMAV Sbjct 301 TLAAAGGPEVDEGFDVRGGALAPGTVRQWLAEHAGDGRRAGLTVVGTHLPHGGDATAMAV 360 Query 361 AAADGEGAYLDTATLTPDDDAALAAWLADPAKPKALHEAKAAVHDLAGRGWTLEGVTSDT 420 AAADGEGAYLDTATLTPDDDAALAAWLADPAKPKALHEAKAAVHDLAGRGWTLEGVTSDT Sbjct 361 AAADGEGAYLDTATLTPDDDAALAAWLADPAKPKALHEAKAAVHDLAGRGWTLEGVTSDT 420 Query 421 ALAAYLVRPGQRSFTLDDLSLRYLRRELRAETPQQQQLSLLDDDDTDAETIQTTILRARA 480 ALAAYLVRPGQRSFTLDDLSLRYLRRELRAETPQQQQLSLLDDDDTDAETIQTTILRARA Sbjct 421 ALAAYLVRPGQRSFTLDDLSLRYLRRELRAETPQQQQLSLLDDDDTDAETIQTTILRARA 480 Query 481 VIDLADALDAELARIDSTALLGEMELPVQRVLAKMESAGIAVDLPMLTELQSQFGDQIRD 540 VIDLADALDAELARIDSTALLGEMELPVQRVLAKMESAGIAVDLPMLTELQSQFGDQIRD Sbjct 481 VIDLADALDAELARIDSTALLGEMELPVQRVLAKMESAGIAVDLPMLTELQSQFGDQIRD 540 Query 541 AAEAAYGVIGKQINLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFDKTGHPFL 600 AAEAAYGVIGKQINLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFDKTGHPFL Sbjct 541 AAEAAYGVIGKQINLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFDKTGHPFL 600 Query 601 QHLLAHRDVTRLKVTVDGLLQAVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAG 660 QHLLAHRDVTRLKVTVDGLLQAVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAG Sbjct 601 QHLLAHRDVTRLKVTVDGLLQAVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAG 660 Query 661 RRIRDAFVVGDGYAELMTADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFVASRAFGVP 720 RRIRDAFVVGDGYAELMTADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFVASRAFGVP Sbjct 661 RRIRDAFVVGDGYAELMTADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFVASRAFGVP 720 Query 721 IDEVTGELRRRVKAMSYGLAYGLSAYGLSQQLKISTEEANEQMDAYFARFGGVRDYLRAV 780 IDEVTGELRRRVKAMSYGLAYGLSAYGLSQQLKISTEEANEQMDAYFARFGGVRDYLRAV Sbjct 721 IDEVTGELRRRVKAMSYGLAYGLSAYGLSQQLKISTEEANEQMDAYFARFGGVRDYLRAV 780 Query 781 VERARKDGYTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIQVDK 840 VERARKDGYTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIQVDK Sbjct 781 VERARKDGYTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIQVDK 840 Query 841 ALNEAQLASRMLLQVHDELLFEIAPGERERVEALVRDKMGGAYPLDVPLEVSVGYGRSWD 900 ALNEAQLASRMLLQVHDELLFEIAPGERERVEALVRDKMGGAYPLDVPLEVSVGYGRSWD Sbjct 841 ALNEAQLASRMLLQVHDELLFEIAPGERERVEALVRDKMGGAYPLDVPLEVSVGYGRSWD 900 Query 901 AAAH 904 AAAH Sbjct 901 AAAH 904 >gi|289554597|ref|ZP_06443807.1| DNA polymerase I polA [Mycobacterium tuberculosis KZN 605] gi|289439229|gb|EFD21722.1| DNA polymerase I polA [Mycobacterium tuberculosis KZN 605] Length=903 Score = 1809 bits (4685), Expect = 0.0, Method: Compositional matrix adjust. Identities = 902/903 (99%), Positives = 903/903 (100%), Gaps = 0/903 (0%) Query 2 VTTASAPSEDRAKPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLR 61 +TTASAPSEDRAKPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLR Sbjct 1 MTTASAPSEDRAKPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLR 60 Query 62 DEAPTHIAAAFDVSRQTFRLQRYPEYKANRSSTPDEFAGQIDITKEVLGALGITVLSEPG 121 DEAPTHIAAAFDVSRQTFRLQRYPEYKANRSSTPDEFAGQIDITKEVLGALGITVLSEPG Sbjct 61 DEAPTHIAAAFDVSRQTFRLQRYPEYKANRSSTPDEFAGQIDITKEVLGALGITVLSEPG 120 Query 122 FEADDLIATLATQAENEGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVVE 181 FEADDLIATLATQAENEGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVVE Sbjct 121 FEADDLIATLATQAENEGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVVE 180 Query 182 KYGLTPRQYPDFAALRGDPSDNLPGIPGVGEKTAAKWIAEYGSLRSLVDNVDAVRGKVGD 241 KYGLTPRQYPDFAALRGDPSDNLPGIPGVGEKTAAKWIAEYGSLRSLVDNVDAVRGKVGD Sbjct 181 KYGLTPRQYPDFAALRGDPSDNLPGIPGVGEKTAAKWIAEYGSLRSLVDNVDAVRGKVGD 240 Query 242 ALRANLASVVRNRELTDLVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFDT 301 ALRANLASVVRNRELTDLVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFDT Sbjct 241 ALRANLASVVRNRELTDLVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFDT 300 Query 302 LAAAGGPEVDEGFDVRGGALAPGTVRQWLAEHAGDGRRAGLTVVGTHLPHGGDATAMAVA 361 LAAAGGPEVDEGFDVRGGALAPGTVRQWLAEHAGDGRRAGLTVVGTHLPHGGDATAMAVA Sbjct 301 LAAAGGPEVDEGFDVRGGALAPGTVRQWLAEHAGDGRRAGLTVVGTHLPHGGDATAMAVA 360 Query 362 AADGEGAYLDTATLTPDDDAALAAWLADPAKPKALHEAKAAVHDLAGRGWTLEGVTSDTA 421 AADGEGAYLDTATLTPDDDAALAAWLADPAKPKALHEAKAAVHDLAGRGWTLEGVTSDTA Sbjct 361 AADGEGAYLDTATLTPDDDAALAAWLADPAKPKALHEAKAAVHDLAGRGWTLEGVTSDTA 420 Query 422 LAAYLVRPGQRSFTLDDLSLRYLRRELRAETPQQQQLSLLDDDDTDAETIQTTILRARAV 481 LAAYLVRPGQRSFTLDDLSLRYLRRELRAETPQQQQLSLLDDDDTDAETIQTTILRARAV Sbjct 421 LAAYLVRPGQRSFTLDDLSLRYLRRELRAETPQQQQLSLLDDDDTDAETIQTTILRARAV 480 Query 482 IDLADALDAELARIDSTALLGEMELPVQRVLAKMESAGIAVDLPMLTELQSQFGDQIRDA 541 IDLADALDAELARIDSTALLGEMELPVQRVLAKMESAGIAVDLPMLTELQSQFGDQIRDA Sbjct 481 IDLADALDAELARIDSTALLGEMELPVQRVLAKMESAGIAVDLPMLTELQSQFGDQIRDA 540 Query 542 AEAAYGVIGKQINLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFDKTGHPFLQ 601 AEAAYGVIGKQINLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFDKTGHPFLQ Sbjct 541 AEAAYGVIGKQINLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFDKTGHPFLQ 600 Query 602 HLLAHRDVTRLKVTVDGLLQAVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAGR 661 HLLAHRDVTRLKVTVDGLLQAVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAGR Sbjct 601 HLLAHRDVTRLKVTVDGLLQAVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAGR 660 Query 662 RIRDAFVVGDGYAELMTADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFVASRAFGVPI 721 RIRDAFVVGDGYAELMTADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFVASRAFGVPI Sbjct 661 RIRDAFVVGDGYAELMTADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFVASRAFGVPI 720 Query 722 DEVTGELRRRVKAMSYGLAYGLSAYGLSQQLKISTEEANEQMDAYFARFGGVRDYLRAVV 781 DEVTGELRRRVKAMSYGLAYGLSAYGLSQQLKISTEEANEQMDAYFARFGGVRDYLRAVV Sbjct 721 DEVTGELRRRVKAMSYGLAYGLSAYGLSQQLKISTEEANEQMDAYFARFGGVRDYLRAVV 780 Query 782 ERARKDGYTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIQVDKA 841 ERARKDGYTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIQVDKA Sbjct 781 ERARKDGYTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIQVDKA 840 Query 842 LNEAQLASRMLLQVHDELLFEIAPGERERVEALVRDKMGGAYPLDVPLEVSVGYGRSWDA 901 LNEAQLASRMLLQVHDELLFEIAPGERERVEALVRDKMGGAYPLDVPLEVSVGYGRSWDA Sbjct 841 LNEAQLASRMLLQVHDELLFEIAPGERERVEALVRDKMGGAYPLDVPLEVSVGYGRSWDA 900 Query 902 AAH 904 AAH Sbjct 901 AAH 903 >gi|289750174|ref|ZP_06509552.1| DNA polymerase I polA [Mycobacterium tuberculosis T92] gi|289753716|ref|ZP_06513094.1| DNA polymerase I polA [Mycobacterium tuberculosis EAS054] gi|289690761|gb|EFD58190.1| DNA polymerase I polA [Mycobacterium tuberculosis T92] gi|289694303|gb|EFD61732.1| DNA polymerase I polA [Mycobacterium tuberculosis EAS054] Length=904 Score = 1808 bits (4684), Expect = 0.0, Method: Compositional matrix adjust. Identities = 902/904 (99%), Positives = 903/904 (99%), Gaps = 0/904 (0%) Query 1 VVTTASAPSEDRAKPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLL 60 +VTTASAPSEDRAKPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLL Sbjct 1 MVTTASAPSEDRAKPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLL 60 Query 61 RDEAPTHIAAAFDVSRQTFRLQRYPEYKANRSSTPDEFAGQIDITKEVLGALGITVLSEP 120 RDEAPTHIAAAFDVSRQTFRLQRYPEYKANRSSTPDEFAGQIDITKEVLGALGITVLSEP Sbjct 61 RDEAPTHIAAAFDVSRQTFRLQRYPEYKANRSSTPDEFAGQIDITKEVLGALGITVLSEP 120 Query 121 GFEADDLIATLATQAENEGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVV 180 GFEADDLIATLATQAENEGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVV Sbjct 121 GFEADDLIATLATQAENEGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVV 180 Query 181 EKYGLTPRQYPDFAALRGDPSDNLPGIPGVGEKTAAKWIAEYGSLRSLVDNVDAVRGKVG 240 EKYGLTPRQYPDFAALRGDPSDNLPGIPGVGEKTAAKWIAEYGSLRSLVDNVDAVRGKVG Sbjct 181 EKYGLTPRQYPDFAALRGDPSDNLPGIPGVGEKTAAKWIAEYGSLRSLVDNVDAVRGKVG 240 Query 241 DALRANLASVVRNRELTDLVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFD 300 DALRANLASVVRNRELTDLVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFD Sbjct 241 DALRANLASVVRNRELTDLVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFD 300 Query 301 TLAAAGGPEVDEGFDVRGGALAPGTVRQWLAEHAGDGRRAGLTVVGTHLPHGGDATAMAV 360 TLAAAGGPEVDEGFDVRGGALAPGTVRQWLAEHAGDGRRAGLTVVGTHLPHGGDATAMAV Sbjct 301 TLAAAGGPEVDEGFDVRGGALAPGTVRQWLAEHAGDGRRAGLTVVGTHLPHGGDATAMAV 360 Query 361 AAADGEGAYLDTATLTPDDDAALAAWLADPAKPKALHEAKAAVHDLAGRGWTLEGVTSDT 420 AAADGEGAYLDTATLTPDDDAALAAWLADPAKPKALHEAKAAVHDLAGRGWTLEGVTSDT Sbjct 361 AAADGEGAYLDTATLTPDDDAALAAWLADPAKPKALHEAKAAVHDLAGRGWTLEGVTSDT 420 Query 421 ALAAYLVRPGQRSFTLDDLSLRYLRRELRAETPQQQQLSLLDDDDTDAETIQTTILRARA 480 ALAAYLVRPGQRSFTLDDLSLRYLRRELRAETPQQQQLSLLDDDDTDAETIQTTILRARA Sbjct 421 ALAAYLVRPGQRSFTLDDLSLRYLRRELRAETPQQQQLSLLDDDDTDAETIQTTILRARA 480 Query 481 VIDLADALDAELARIDSTALLGEMELPVQRVLAKMESAGIAVDLPMLTELQSQFGDQIRD 540 VIDLADALDAELARIDSTALLGEMELPVQRVLAKMESAGIAVDLPMLTELQSQFGDQIRD Sbjct 481 VIDLADALDAELARIDSTALLGEMELPVQRVLAKMESAGIAVDLPMLTELQSQFGDQIRD 540 Query 541 AAEAAYGVIGKQINLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFDKTGHPFL 600 AAEAAYGVIGKQINLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFDKTGHPFL Sbjct 541 AAEAAYGVIGKQINLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFDKTGHPFL 600 Query 601 QHLLAHRDVTRLKVTVDGLLQAVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAG 660 QHLLAHRDVTRLKVTVDGLLQAVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDA Sbjct 601 QHLLAHRDVTRLKVTVDGLLQAVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAS 660 Query 661 RRIRDAFVVGDGYAELMTADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFVASRAFGVP 720 RRIRDAFVVGDGYAELMTADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFVASRAFGVP Sbjct 661 RRIRDAFVVGDGYAELMTADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFVASRAFGVP 720 Query 721 IDEVTGELRRRVKAMSYGLAYGLSAYGLSQQLKISTEEANEQMDAYFARFGGVRDYLRAV 780 IDEVTGELRRRVKAMSYGLAYGLSAYGLSQQLKISTEEANEQMDAYFARFGGVRDYLRAV Sbjct 721 IDEVTGELRRRVKAMSYGLAYGLSAYGLSQQLKISTEEANEQMDAYFARFGGVRDYLRAV 780 Query 781 VERARKDGYTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIQVDK 840 VERARKDGYTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIQVDK Sbjct 781 VERARKDGYTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIQVDK 840 Query 841 ALNEAQLASRMLLQVHDELLFEIAPGERERVEALVRDKMGGAYPLDVPLEVSVGYGRSWD 900 ALNEAQLASRMLLQVHDELLFEIAPGERERVEALVRDKMGGAYPLDVPLEVSVGYGRSWD Sbjct 841 ALNEAQLASRMLLQVHDELLFEIAPGERERVEALVRDKMGGAYPLDVPLEVSVGYGRSWD 900 Query 901 AAAH 904 AAAH Sbjct 901 AAAH 904 >gi|339631685|ref|YP_004723327.1| DNA polymerase I [Mycobacterium africanum GM041182] gi|339331041|emb|CCC26713.1| putative DNA polymerase I POLA [Mycobacterium africanum GM041182] Length=904 Score = 1808 bits (4683), Expect = 0.0, Method: Compositional matrix adjust. Identities = 902/904 (99%), Positives = 903/904 (99%), Gaps = 0/904 (0%) Query 1 VVTTASAPSEDRAKPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLL 60 +VTTASAPSEDRAKPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLL Sbjct 1 MVTTASAPSEDRAKPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLL 60 Query 61 RDEAPTHIAAAFDVSRQTFRLQRYPEYKANRSSTPDEFAGQIDITKEVLGALGITVLSEP 120 RDEAPTHIAAAFDVSRQTFRLQRYPEYKANRSSTPDEFAGQIDITKEVLGALGITVLSEP Sbjct 61 RDEAPTHIAAAFDVSRQTFRLQRYPEYKANRSSTPDEFAGQIDITKEVLGALGITVLSEP 120 Query 121 GFEADDLIATLATQAENEGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVV 180 GFEADDLIATLATQAENEGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVV Sbjct 121 GFEADDLIATLATQAENEGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVV 180 Query 181 EKYGLTPRQYPDFAALRGDPSDNLPGIPGVGEKTAAKWIAEYGSLRSLVDNVDAVRGKVG 240 EKYGLTPRQYPDFAALRGDPSDNLPGIPGVGEKTAAKWIAEYGSLRSLVDNVDAVRGKVG Sbjct 181 EKYGLTPRQYPDFAALRGDPSDNLPGIPGVGEKTAAKWIAEYGSLRSLVDNVDAVRGKVG 240 Query 241 DALRANLASVVRNRELTDLVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFD 300 DALRANLASVVRNRELTDLVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFD Sbjct 241 DALRANLASVVRNRELTDLVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFD 300 Query 301 TLAAAGGPEVDEGFDVRGGALAPGTVRQWLAEHAGDGRRAGLTVVGTHLPHGGDATAMAV 360 TLAAAGGPEVDEGFDVRGGALAPGTVRQWLAEHAGDGRRAGLTVVGTHLPHGGDAT MAV Sbjct 301 TLAAAGGPEVDEGFDVRGGALAPGTVRQWLAEHAGDGRRAGLTVVGTHLPHGGDATVMAV 360 Query 361 AAADGEGAYLDTATLTPDDDAALAAWLADPAKPKALHEAKAAVHDLAGRGWTLEGVTSDT 420 AAADGEGAYLDTATLTPDDDAALAAWLADPAKPKALHEAKAAVHDLAGRGWTLEGVTSDT Sbjct 361 AAADGEGAYLDTATLTPDDDAALAAWLADPAKPKALHEAKAAVHDLAGRGWTLEGVTSDT 420 Query 421 ALAAYLVRPGQRSFTLDDLSLRYLRRELRAETPQQQQLSLLDDDDTDAETIQTTILRARA 480 ALAAYLVRPGQRSFTLDDLSLRYLRRELRAETPQQQQLSLLDDDDTDAETIQTTILRARA Sbjct 421 ALAAYLVRPGQRSFTLDDLSLRYLRRELRAETPQQQQLSLLDDDDTDAETIQTTILRARA 480 Query 481 VIDLADALDAELARIDSTALLGEMELPVQRVLAKMESAGIAVDLPMLTELQSQFGDQIRD 540 VIDLADALDAELARIDSTALLGEMELPVQRVLAKMESAGIAVDLPMLTELQSQFGDQIRD Sbjct 481 VIDLADALDAELARIDSTALLGEMELPVQRVLAKMESAGIAVDLPMLTELQSQFGDQIRD 540 Query 541 AAEAAYGVIGKQINLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFDKTGHPFL 600 AAEAAYGVIGKQINLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFDKTGHPFL Sbjct 541 AAEAAYGVIGKQINLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFDKTGHPFL 600 Query 601 QHLLAHRDVTRLKVTVDGLLQAVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAG 660 QHLLAHRDVTRLKVTVDGLLQAVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAG Sbjct 601 QHLLAHRDVTRLKVTVDGLLQAVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAG 660 Query 661 RRIRDAFVVGDGYAELMTADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFVASRAFGVP 720 RRIRDAFVVGDGYAELMTADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFVASRAFGVP Sbjct 661 RRIRDAFVVGDGYAELMTADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFVASRAFGVP 720 Query 721 IDEVTGELRRRVKAMSYGLAYGLSAYGLSQQLKISTEEANEQMDAYFARFGGVRDYLRAV 780 IDEVTGELRRRVKAMSYGLAYGLSAYGLSQQLKISTEEANEQMDAYFARFGGVRDYLRAV Sbjct 721 IDEVTGELRRRVKAMSYGLAYGLSAYGLSQQLKISTEEANEQMDAYFARFGGVRDYLRAV 780 Query 781 VERARKDGYTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIQVDK 840 VERARKDGYTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIQVDK Sbjct 781 VERARKDGYTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIQVDK 840 Query 841 ALNEAQLASRMLLQVHDELLFEIAPGERERVEALVRDKMGGAYPLDVPLEVSVGYGRSWD 900 ALNEAQLASRMLLQVHDELLFEIAPGERERVEALVRDKMGGAYPLDVPLEVSVGYGRSWD Sbjct 841 ALNEAQLASRMLLQVHDELLFEIAPGERERVEALVRDKMGGAYPLDVPLEVSVGYGRSWD 900 Query 901 AAAH 904 AAAH Sbjct 901 AAAH 904 >gi|344219449|gb|AEN00080.1| DNA polymerase I [Mycobacterium tuberculosis CTRI-2] Length=904 Score = 1806 bits (4678), Expect = 0.0, Method: Compositional matrix adjust. Identities = 902/904 (99%), Positives = 903/904 (99%), Gaps = 0/904 (0%) Query 1 VVTTASAPSEDRAKPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLL 60 +VTTASAPSEDRAKPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLL Sbjct 1 MVTTASAPSEDRAKPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLL 60 Query 61 RDEAPTHIAAAFDVSRQTFRLQRYPEYKANRSSTPDEFAGQIDITKEVLGALGITVLSEP 120 RDEAPTHIAAAFDVSRQTFRLQRYPEYKANRSSTPDEFAGQIDITKEVLGALGITVLSEP Sbjct 61 RDEAPTHIAAAFDVSRQTFRLQRYPEYKANRSSTPDEFAGQIDITKEVLGALGITVLSEP 120 Query 121 GFEADDLIATLATQAENEGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVV 180 GFEADDLIATLATQAENEGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVV Sbjct 121 GFEADDLIATLATQAENEGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVV 180 Query 181 EKYGLTPRQYPDFAALRGDPSDNLPGIPGVGEKTAAKWIAEYGSLRSLVDNVDAVRGKVG 240 EKYGLTPRQYPDFAALRGDPSDNLPGIPGVGEKTAAKWIAEYGSL SLVDNVDAVRGKVG Sbjct 181 EKYGLTPRQYPDFAALRGDPSDNLPGIPGVGEKTAAKWIAEYGSLWSLVDNVDAVRGKVG 240 Query 241 DALRANLASVVRNRELTDLVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFD 300 DALRANLASVVRNRELTDLVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFD Sbjct 241 DALRANLASVVRNRELTDLVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFD 300 Query 301 TLAAAGGPEVDEGFDVRGGALAPGTVRQWLAEHAGDGRRAGLTVVGTHLPHGGDATAMAV 360 TLAAAGGPEVDEGFDVRGGALAPGTVRQWLAEHAGDGRRAGLTVVGTHLPHGGDATAMAV Sbjct 301 TLAAAGGPEVDEGFDVRGGALAPGTVRQWLAEHAGDGRRAGLTVVGTHLPHGGDATAMAV 360 Query 361 AAADGEGAYLDTATLTPDDDAALAAWLADPAKPKALHEAKAAVHDLAGRGWTLEGVTSDT 420 AAADGEGAYLDTATLTPDDDAALAAWLADPAKPKALHEAKAAVHDLAGRGWTLEGVTSDT Sbjct 361 AAADGEGAYLDTATLTPDDDAALAAWLADPAKPKALHEAKAAVHDLAGRGWTLEGVTSDT 420 Query 421 ALAAYLVRPGQRSFTLDDLSLRYLRRELRAETPQQQQLSLLDDDDTDAETIQTTILRARA 480 ALAAYLVRPGQRSFTLDDLSLRYLRRELRAETPQQQQLSLLDDDDTDAETIQTTILRARA Sbjct 421 ALAAYLVRPGQRSFTLDDLSLRYLRRELRAETPQQQQLSLLDDDDTDAETIQTTILRARA 480 Query 481 VIDLADALDAELARIDSTALLGEMELPVQRVLAKMESAGIAVDLPMLTELQSQFGDQIRD 540 VIDLADALDAELARIDSTALLGEMELPVQRVLAKMESAGIAVDLPMLTELQSQFGDQIRD Sbjct 481 VIDLADALDAELARIDSTALLGEMELPVQRVLAKMESAGIAVDLPMLTELQSQFGDQIRD 540 Query 541 AAEAAYGVIGKQINLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFDKTGHPFL 600 AAEAAYGVIGKQINLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFDKTGHPFL Sbjct 541 AAEAAYGVIGKQINLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFDKTGHPFL 600 Query 601 QHLLAHRDVTRLKVTVDGLLQAVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAG 660 QHLLAHRDVTRLKVTVDGLLQAVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAG Sbjct 601 QHLLAHRDVTRLKVTVDGLLQAVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAG 660 Query 661 RRIRDAFVVGDGYAELMTADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFVASRAFGVP 720 RRIRDAFVVGDGYAELMTADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFVASRAFGVP Sbjct 661 RRIRDAFVVGDGYAELMTADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFVASRAFGVP 720 Query 721 IDEVTGELRRRVKAMSYGLAYGLSAYGLSQQLKISTEEANEQMDAYFARFGGVRDYLRAV 780 IDEVTGELRRRVKAMSYGLAYGLSAYGLSQQLKISTEEANEQMDAYFARFGGVRDYLRAV Sbjct 721 IDEVTGELRRRVKAMSYGLAYGLSAYGLSQQLKISTEEANEQMDAYFARFGGVRDYLRAV 780 Query 781 VERARKDGYTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIQVDK 840 VERARKDGYTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIQVDK Sbjct 781 VERARKDGYTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIQVDK 840 Query 841 ALNEAQLASRMLLQVHDELLFEIAPGERERVEALVRDKMGGAYPLDVPLEVSVGYGRSWD 900 ALNEAQLASRMLLQVHDELLFEIAPGERERVEALVRDKMGGAYPLDVPLEVSVGYGRSWD Sbjct 841 ALNEAQLASRMLLQVHDELLFEIAPGERERVEALVRDKMGGAYPLDVPLEVSVGYGRSWD 900 Query 901 AAAH 904 AAAH Sbjct 901 AAAH 904 >gi|289443081|ref|ZP_06432825.1| DNA polymerase I polA [Mycobacterium tuberculosis T46] gi|289569674|ref|ZP_06449901.1| DNA polymerase I polA [Mycobacterium tuberculosis T17] gi|289416000|gb|EFD13240.1| DNA polymerase I polA [Mycobacterium tuberculosis T46] gi|289543428|gb|EFD47076.1| DNA polymerase I polA [Mycobacterium tuberculosis T17] Length=904 Score = 1806 bits (4678), Expect = 0.0, Method: Compositional matrix adjust. Identities = 901/904 (99%), Positives = 903/904 (99%), Gaps = 0/904 (0%) Query 1 VVTTASAPSEDRAKPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLL 60 +VTTASAPSEDRAKPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLL Sbjct 1 MVTTASAPSEDRAKPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLL 60 Query 61 RDEAPTHIAAAFDVSRQTFRLQRYPEYKANRSSTPDEFAGQIDITKEVLGALGITVLSEP 120 RDEAPTHIAAAFDVSRQTFRLQRYPEYKANRSSTPDEFAGQIDITKEVLGALGITVLSEP Sbjct 61 RDEAPTHIAAAFDVSRQTFRLQRYPEYKANRSSTPDEFAGQIDITKEVLGALGITVLSEP 120 Query 121 GFEADDLIATLATQAENEGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVV 180 GFEADDLIATLATQAENEGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVV Sbjct 121 GFEADDLIATLATQAENEGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVV 180 Query 181 EKYGLTPRQYPDFAALRGDPSDNLPGIPGVGEKTAAKWIAEYGSLRSLVDNVDAVRGKVG 240 EKYGLTPRQYPDFAALRGDPSDNLPGIPGVGEKTAAKWIAEYGSLRSLVDNVDAVRGKVG Sbjct 181 EKYGLTPRQYPDFAALRGDPSDNLPGIPGVGEKTAAKWIAEYGSLRSLVDNVDAVRGKVG 240 Query 241 DALRANLASVVRNRELTDLVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFD 300 DALRANLASVVRNRELTDLVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFD Sbjct 241 DALRANLASVVRNRELTDLVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFD 300 Query 301 TLAAAGGPEVDEGFDVRGGALAPGTVRQWLAEHAGDGRRAGLTVVGTHLPHGGDATAMAV 360 TLAAAGGPEVDEGFDVRGGALAPGTVRQWLAEHAGDGRRAGLTVVGTHLPHGGDATAMAV Sbjct 301 TLAAAGGPEVDEGFDVRGGALAPGTVRQWLAEHAGDGRRAGLTVVGTHLPHGGDATAMAV 360 Query 361 AAADGEGAYLDTATLTPDDDAALAAWLADPAKPKALHEAKAAVHDLAGRGWTLEGVTSDT 420 AAADGEGAYLDTATLTPDDDAALAAWLADPAKPKALHEAKAAVHDLAGRGWTLEGVTSDT Sbjct 361 AAADGEGAYLDTATLTPDDDAALAAWLADPAKPKALHEAKAAVHDLAGRGWTLEGVTSDT 420 Query 421 ALAAYLVRPGQRSFTLDDLSLRYLRRELRAETPQQQQLSLLDDDDTDAETIQTTILRARA 480 ALAAYLVRPGQRSFTLDDLSLRYLRRELRAETPQQQQLSLLDDDDTDAETIQTTILRARA Sbjct 421 ALAAYLVRPGQRSFTLDDLSLRYLRRELRAETPQQQQLSLLDDDDTDAETIQTTILRARA 480 Query 481 VIDLADALDAELARIDSTALLGEMELPVQRVLAKMESAGIAVDLPMLTELQSQFGDQIRD 540 VIDLADALDAELARIDSTALLGEMELPVQRVLAKMESAGIAVDLPMLTELQSQFGDQIRD Sbjct 481 VIDLADALDAELARIDSTALLGEMELPVQRVLAKMESAGIAVDLPMLTELQSQFGDQIRD 540 Query 541 AAEAAYGVIGKQINLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFDKTGHPFL 600 AA+AAYGVIGKQINLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFDKTGHPFL Sbjct 541 AADAAYGVIGKQINLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFDKTGHPFL 600 Query 601 QHLLAHRDVTRLKVTVDGLLQAVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAG 660 QHLLAHRDVTRLKVTVDGLLQAVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDA Sbjct 601 QHLLAHRDVTRLKVTVDGLLQAVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAS 660 Query 661 RRIRDAFVVGDGYAELMTADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFVASRAFGVP 720 RRIRDAFVVGDGYAELMTADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFVASRAFGVP Sbjct 661 RRIRDAFVVGDGYAELMTADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFVASRAFGVP 720 Query 721 IDEVTGELRRRVKAMSYGLAYGLSAYGLSQQLKISTEEANEQMDAYFARFGGVRDYLRAV 780 IDEVTGELRRRVKAMSYGLAYGLSAYGLSQQLKISTEEANEQMDAYFARFGGVRDYLRAV Sbjct 721 IDEVTGELRRRVKAMSYGLAYGLSAYGLSQQLKISTEEANEQMDAYFARFGGVRDYLRAV 780 Query 781 VERARKDGYTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIQVDK 840 VERARKDGYTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIQVDK Sbjct 781 VERARKDGYTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIQVDK 840 Query 841 ALNEAQLASRMLLQVHDELLFEIAPGERERVEALVRDKMGGAYPLDVPLEVSVGYGRSWD 900 ALNEAQLASRMLLQVHDELLFEIAPGERERVEALVRDKMGGAYPLDVPLEVSVGYGRSWD Sbjct 841 ALNEAQLASRMLLQVHDELLFEIAPGERERVEALVRDKMGGAYPLDVPLEVSVGYGRSWD 900 Query 901 AAAH 904 AAAH Sbjct 901 AAAH 904 >gi|289745934|ref|ZP_06505312.1| DNA polymerase I polA [Mycobacterium tuberculosis 02_1987] gi|289757731|ref|ZP_06517109.1| DNA polymerase I polA [Mycobacterium tuberculosis T85] gi|294996578|ref|ZP_06802269.1| DNA polymerase I [Mycobacterium tuberculosis 210] 7 more sequence titles Length=904 Score = 1803 bits (4669), Expect = 0.0, Method: Compositional matrix adjust. Identities = 901/904 (99%), Positives = 902/904 (99%), Gaps = 0/904 (0%) Query 1 VVTTASAPSEDRAKPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLL 60 +VTTASAPSEDRAKPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLL Sbjct 1 MVTTASAPSEDRAKPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLL 60 Query 61 RDEAPTHIAAAFDVSRQTFRLQRYPEYKANRSSTPDEFAGQIDITKEVLGALGITVLSEP 120 RDEAPTHIAAAFDVSRQTFRLQRYPEYKANRSSTPDEFAGQIDITKEVLGALGITVLSEP Sbjct 61 RDEAPTHIAAAFDVSRQTFRLQRYPEYKANRSSTPDEFAGQIDITKEVLGALGITVLSEP 120 Query 121 GFEADDLIATLATQAENEGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVV 180 GFEADDLIATLATQAENEGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVV Sbjct 121 GFEADDLIATLATQAENEGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVV 180 Query 181 EKYGLTPRQYPDFAALRGDPSDNLPGIPGVGEKTAAKWIAEYGSLRSLVDNVDAVRGKVG 240 EKYGL P QYPDFAALRGDPSDNLPGIPGVGEKTAAKWIAEYGSLRSLVDNVDAVRGKVG Sbjct 181 EKYGLPPGQYPDFAALRGDPSDNLPGIPGVGEKTAAKWIAEYGSLRSLVDNVDAVRGKVG 240 Query 241 DALRANLASVVRNRELTDLVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFD 300 DALRANLASVVRNRELTDLVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFD Sbjct 241 DALRANLASVVRNRELTDLVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFD 300 Query 301 TLAAAGGPEVDEGFDVRGGALAPGTVRQWLAEHAGDGRRAGLTVVGTHLPHGGDATAMAV 360 TLAAAGGPEVDEGFDVRGGALAPGTVRQWLAEHAGDGRRAGLTVVGTHLPHGGDATAMAV Sbjct 301 TLAAAGGPEVDEGFDVRGGALAPGTVRQWLAEHAGDGRRAGLTVVGTHLPHGGDATAMAV 360 Query 361 AAADGEGAYLDTATLTPDDDAALAAWLADPAKPKALHEAKAAVHDLAGRGWTLEGVTSDT 420 AAADGEGAYLDTATLTPDDDAALAAWLADPAKPKALHEAKAAVHDLAGRGWTLEGVTSDT Sbjct 361 AAADGEGAYLDTATLTPDDDAALAAWLADPAKPKALHEAKAAVHDLAGRGWTLEGVTSDT 420 Query 421 ALAAYLVRPGQRSFTLDDLSLRYLRRELRAETPQQQQLSLLDDDDTDAETIQTTILRARA 480 ALAAYLVRPGQRSFTLDDLSLRYLRRELRAETPQQQQLSLLDDDDTDAETIQTTILRARA Sbjct 421 ALAAYLVRPGQRSFTLDDLSLRYLRRELRAETPQQQQLSLLDDDDTDAETIQTTILRARA 480 Query 481 VIDLADALDAELARIDSTALLGEMELPVQRVLAKMESAGIAVDLPMLTELQSQFGDQIRD 540 VIDLADALDAELARIDSTALLGEMELPVQRVLAKMESAGIAVDLPMLTELQSQFGDQIRD Sbjct 481 VIDLADALDAELARIDSTALLGEMELPVQRVLAKMESAGIAVDLPMLTELQSQFGDQIRD 540 Query 541 AAEAAYGVIGKQINLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFDKTGHPFL 600 AAEAAYGVIGKQINLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFDKTGHPFL Sbjct 541 AAEAAYGVIGKQINLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFDKTGHPFL 600 Query 601 QHLLAHRDVTRLKVTVDGLLQAVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAG 660 QHLLAHRDVTRLKVTVDGLLQAVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAG Sbjct 601 QHLLAHRDVTRLKVTVDGLLQAVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAG 660 Query 661 RRIRDAFVVGDGYAELMTADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFVASRAFGVP 720 RRIRDAFVVGDGYAELMTADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFVASRAFGVP Sbjct 661 RRIRDAFVVGDGYAELMTADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFVASRAFGVP 720 Query 721 IDEVTGELRRRVKAMSYGLAYGLSAYGLSQQLKISTEEANEQMDAYFARFGGVRDYLRAV 780 IDEVTGELRRRVKAMSYGLAYGLSAYGLSQQLKISTEEANEQMDAYFARFGGVRDYLRAV Sbjct 721 IDEVTGELRRRVKAMSYGLAYGLSAYGLSQQLKISTEEANEQMDAYFARFGGVRDYLRAV 780 Query 781 VERARKDGYTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIQVDK 840 VERARKDGYTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIQVDK Sbjct 781 VERARKDGYTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIQVDK 840 Query 841 ALNEAQLASRMLLQVHDELLFEIAPGERERVEALVRDKMGGAYPLDVPLEVSVGYGRSWD 900 ALNEAQLASRMLLQVHDELLFEIAPGERERVEALVRDKMGGAYPLDVPLEVSVGYGRSWD Sbjct 841 ALNEAQLASRMLLQVHDELLFEIAPGERERVEALVRDKMGGAYPLDVPLEVSVGYGRSWD 900 Query 901 AAAH 904 AAAH Sbjct 901 AAAH 904 >gi|340626634|ref|YP_004745086.1| putative DNA polymerase I POLA [Mycobacterium canettii CIPT 140010059] gi|340004824|emb|CCC43969.1| putative DNA polymerase I POLA [Mycobacterium canettii CIPT 140010059] Length=904 Score = 1795 bits (4650), Expect = 0.0, Method: Compositional matrix adjust. Identities = 896/904 (99%), Positives = 901/904 (99%), Gaps = 0/904 (0%) Query 1 VVTTASAPSEDRAKPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLL 60 +VTTASAPSEDRAKPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLL Sbjct 1 MVTTASAPSEDRAKPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLL 60 Query 61 RDEAPTHIAAAFDVSRQTFRLQRYPEYKANRSSTPDEFAGQIDITKEVLGALGITVLSEP 120 RDE+PTHIAAAFDVSRQTFRLQRYPEYKANRSSTPDEFAGQIDITKEVLGALGITVLSEP Sbjct 61 RDESPTHIAAAFDVSRQTFRLQRYPEYKANRSSTPDEFAGQIDITKEVLGALGITVLSEP 120 Query 121 GFEADDLIATLATQAENEGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVV 180 GFEADDLIATLAT+AENEGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVV Sbjct 121 GFEADDLIATLATEAENEGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVV 180 Query 181 EKYGLTPRQYPDFAALRGDPSDNLPGIPGVGEKTAAKWIAEYGSLRSLVDNVDAVRGKVG 240 EKYGLTPRQYPDFAALRGDPSDNLPGIPGVGEKTAAKWIAEYGSLRSLVDNVDAVRGKVG Sbjct 181 EKYGLTPRQYPDFAALRGDPSDNLPGIPGVGEKTAAKWIAEYGSLRSLVDNVDAVRGKVG 240 Query 241 DALRANLASVVRNRELTDLVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFD 300 DALRANLASVVRNRELTDLVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFD Sbjct 241 DALRANLASVVRNRELTDLVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFD 300 Query 301 TLAAAGGPEVDEGFDVRGGALAPGTVRQWLAEHAGDGRRAGLTVVGTHLPHGGDATAMAV 360 TLAAAGGPEVDEGFDVRGGALAPGTV QWLAEHAGDGRR+GLTVVGTHLPHGGDATAMAV Sbjct 301 TLAAAGGPEVDEGFDVRGGALAPGTVGQWLAEHAGDGRRSGLTVVGTHLPHGGDATAMAV 360 Query 361 AAADGEGAYLDTATLTPDDDAALAAWLADPAKPKALHEAKAAVHDLAGRGWTLEGVTSDT 420 AAADGEGAYLDTATLTPDDDAALAAWLADPAKPKALHEAKAAVHDLAGRGWTLEGVTSDT Sbjct 361 AAADGEGAYLDTATLTPDDDAALAAWLADPAKPKALHEAKAAVHDLAGRGWTLEGVTSDT 420 Query 421 ALAAYLVRPGQRSFTLDDLSLRYLRRELRAETPQQQQLSLLDDDDTDAETIQTTILRARA 480 ALAAYLVRPGQRSFTLDDLSLRYLRRELRAETPQQQQLSLLDDDDTDAETIQTTILRARA Sbjct 421 ALAAYLVRPGQRSFTLDDLSLRYLRRELRAETPQQQQLSLLDDDDTDAETIQTTILRARA 480 Query 481 VIDLADALDAELARIDSTALLGEMELPVQRVLAKMESAGIAVDLPMLTELQSQFGDQIRD 540 VIDLADALDAELARIDSTALLGEMELPVQRVLAKMESAGIAVDLPMLTELQSQFGDQIRD Sbjct 481 VIDLADALDAELARIDSTALLGEMELPVQRVLAKMESAGIAVDLPMLTELQSQFGDQIRD 540 Query 541 AAEAAYGVIGKQINLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFDKTGHPFL 600 AAEAAYGVIGKQINLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFDKTGHPFL Sbjct 541 AAEAAYGVIGKQINLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFDKTGHPFL 600 Query 601 QHLLAHRDVTRLKVTVDGLLQAVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAG 660 QHLLAHRDVTRLKVTVDGLLQAVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAG Sbjct 601 QHLLAHRDVTRLKVTVDGLLQAVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAG 660 Query 661 RRIRDAFVVGDGYAELMTADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFVASRAFGVP 720 RRIRDAFVVG GYAELMTADYSQIEMRIMAHLS DEGLIEAFNTGEDLHSFVASRAFGVP Sbjct 661 RRIRDAFVVGGGYAELMTADYSQIEMRIMAHLSRDEGLIEAFNTGEDLHSFVASRAFGVP 720 Query 721 IDEVTGELRRRVKAMSYGLAYGLSAYGLSQQLKISTEEANEQMDAYFARFGGVRDYLRAV 780 I+EVTGELRRRVKAMSYGLAYGLSAYGLSQQLKISTEEANEQMDAYFARFGGVRDYLRAV Sbjct 721 IEEVTGELRRRVKAMSYGLAYGLSAYGLSQQLKISTEEANEQMDAYFARFGGVRDYLRAV 780 Query 781 VERARKDGYTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIQVDK 840 VERARKDGYTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIQVDK Sbjct 781 VERARKDGYTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIQVDK 840 Query 841 ALNEAQLASRMLLQVHDELLFEIAPGERERVEALVRDKMGGAYPLDVPLEVSVGYGRSWD 900 ALNEAQLASRMLLQVHDELLFEIAPGERERVEALVRDKMGGAYPLDVPLEVSVGYGRSWD Sbjct 841 ALNEAQLASRMLLQVHDELLFEIAPGERERVEALVRDKMGGAYPLDVPLEVSVGYGRSWD 900 Query 901 AAAH 904 AAAH Sbjct 901 AAAH 904 >gi|240168007|ref|ZP_04746666.1| DNA polymerase I [Mycobacterium kansasii ATCC 12478] Length=900 Score = 1620 bits (4195), Expect = 0.0, Method: Compositional matrix adjust. Identities = 820/900 (92%), Positives = 855/900 (95%), Gaps = 2/900 (0%) Query 6 SAPSEDRAKPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLRDEAP 65 S SEDRAKPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLRDEAP Sbjct 2 STASEDRAKPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLRDEAP 61 Query 66 THIAAAFDVSRQTFRLQRYPEYKANRSSTPDEFAGQIDITKEVLGALGITVLSEPGFEAD 125 THIAAAFDVSRQTFR +RYPEYKANRSSTPDEF GQIDITKEVLGALGITVL+EPGFEAD Sbjct 62 THIAAAFDVSRQTFRSERYPEYKANRSSTPDEFHGQIDITKEVLGALGITVLAEPGFEAD 121 Query 126 DLIATLATQAENEGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVVEKYGL 185 D+IATLATQAE EGYRVLVVTGDRD+LQLVSDDVTVLYPRKGVSELTRFTPEAVVEKYGL Sbjct 122 DIIATLATQAEKEGYRVLVVTGDRDSLQLVSDDVTVLYPRKGVSELTRFTPEAVVEKYGL 181 Query 186 TPRQYPDFAALRGDPSDNLPGIPGVGEKTAAKWIAEYGSLRSLVDNVDAVRGKVGDALRA 245 TP QYPDFAALRGDPSDNLPGIPGVGEKTA KWIAEYGSL+ LVD+VD+VRGKVGDALRA Sbjct 182 TPAQYPDFAALRGDPSDNLPGIPGVGEKTATKWIAEYGSLQELVDHVDSVRGKVGDALRA 241 Query 246 NLASVVRNRELTDLVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFDTLAAA 305 ++A+VVRNRELT+LVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFDTLAA Sbjct 242 HVANVVRNRELTELVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFDTLAAV 301 Query 306 GGPEVDEGFDVRGGALAPGTVRQWLAEHAGDGRRAGLTVVGTHLPHGGDATAMAVAAADG 365 PEVDEGFDVRGG L PGTV QWLA HAGDGRR GLTVVGTHLPHGGD TA+A+AAADG Sbjct 302 E-PEVDEGFDVRGGTLQPGTVAQWLAAHAGDGRRCGLTVVGTHLPHGGDTTALAIAAADG 360 Query 366 EGAYLDTATLTPDDDAALAAWLADPAKPKALHEAKAAVHDLAGRGWTLEGVTSDTALAAY 425 +G Y+ TAT+TP+DDAALAAWLADPAKPKALHEAK A+HDL GRGWTL+GVTSDTALAAY Sbjct 361 DGGYIGTATVTPEDDAALAAWLADPAKPKALHEAKLAIHDLGGRGWTLDGVTSDTALAAY 420 Query 426 LVRPGQRSFTLDDLSLRYLRRELRAETPQQQQLSLLDD-DDTDAETIQTTILRARAVIDL 484 LVRPGQRSFTLDDLSLRYLRRELRAETP+QQQLSLLDD + D + +QT ILRARAV DL Sbjct 421 LVRPGQRSFTLDDLSLRYLRRELRAETPEQQQLSLLDDMEGVDDQAVQTAILRARAVADL 480 Query 485 ADALDAELARIDSTALLGEMELPVQRVLAKMESAGIAVDLPMLTELQSQFGDQIRDAAEA 544 A+ALDAELARIDSTALL +MELPVQRVLA ME AGIAVDL +L ELQSQF DQIRDAAEA Sbjct 481 AEALDAELARIDSTALLADMELPVQRVLADMERAGIAVDLRLLAELQSQFADQIRDAAEA 540 Query 545 AYGVIGKQINLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFDKTGHPFLQHLL 604 AY VIGKQINLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADA+Q LF+KTGHPFLQHLL Sbjct 541 AYAVIGKQINLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADAVQGLFEKTGHPFLQHLL 600 Query 605 AHRDVTRLKVTVDGLLQAVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAGRRIR 664 AHRDVTRLKVTVDGLL +VAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAGR+IR Sbjct 601 AHRDVTRLKVTVDGLLNSVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAGRQIR 660 Query 665 DAFVVGDGYAELMTADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFVASRAFGVPIDEV 724 DAFVVG GY+ELMTADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFVASRAFGVPIDEV Sbjct 661 DAFVVGAGYSELMTADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFVASRAFGVPIDEV 720 Query 725 TGELRRRVKAMSYGLAYGLSAYGLSQQLKISTEEANEQMDAYFARFGGVRDYLRAVVERA 784 TGELRRRVKAMSYGLAYGLSAYGLS QLKISTEEA QMD YFARFGGVRDYL AVVE+A Sbjct 721 TGELRRRVKAMSYGLAYGLSAYGLSTQLKISTEEAKVQMDQYFARFGGVRDYLMAVVEQA 780 Query 785 RKDGYTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIQVDKALNE 844 RKDGYTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMI+VDKAL E Sbjct 781 RKDGYTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIEVDKALTE 840 Query 845 AQLASRMLLQVHDELLFEIAPGERERVEALVRDKMGGAYPLDVPLEVSVGYGRSWDAAAH 904 A LASRMLLQVHDELLFEIAPGERERVEALVR+KMGGAYPLDVPLEVSVG+GRSWDAAAH Sbjct 841 AGLASRMLLQVHDELLFEIAPGERERVEALVREKMGGAYPLDVPLEVSVGFGRSWDAAAH 900 >gi|254550633|ref|ZP_05141080.1| DNA polymerase I [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] Length=814 Score = 1599 bits (4141), Expect = 0.0, Method: Compositional matrix adjust. Identities = 797/797 (100%), Positives = 797/797 (100%), Gaps = 0/797 (0%) Query 18 MLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLRDEAPTHIAAAFDVSRQ 77 MLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLRDEAPTHIAAAFDVSRQ Sbjct 1 MLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLRDEAPTHIAAAFDVSRQ 60 Query 78 TFRLQRYPEYKANRSSTPDEFAGQIDITKEVLGALGITVLSEPGFEADDLIATLATQAEN 137 TFRLQRYPEYKANRSSTPDEFAGQIDITKEVLGALGITVLSEPGFEADDLIATLATQAEN Sbjct 61 TFRLQRYPEYKANRSSTPDEFAGQIDITKEVLGALGITVLSEPGFEADDLIATLATQAEN 120 Query 138 EGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVVEKYGLTPRQYPDFAALR 197 EGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVVEKYGLTPRQYPDFAALR Sbjct 121 EGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVVEKYGLTPRQYPDFAALR 180 Query 198 GDPSDNLPGIPGVGEKTAAKWIAEYGSLRSLVDNVDAVRGKVGDALRANLASVVRNRELT 257 GDPSDNLPGIPGVGEKTAAKWIAEYGSLRSLVDNVDAVRGKVGDALRANLASVVRNRELT Sbjct 181 GDPSDNLPGIPGVGEKTAAKWIAEYGSLRSLVDNVDAVRGKVGDALRANLASVVRNRELT 240 Query 258 DLVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFDTLAAAGGPEVDEGFDVR 317 DLVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFDTLAAAGGPEVDEGFDVR Sbjct 241 DLVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFDTLAAAGGPEVDEGFDVR 300 Query 318 GGALAPGTVRQWLAEHAGDGRRAGLTVVGTHLPHGGDATAMAVAAADGEGAYLDTATLTP 377 GGALAPGTVRQWLAEHAGDGRRAGLTVVGTHLPHGGDATAMAVAAADGEGAYLDTATLTP Sbjct 301 GGALAPGTVRQWLAEHAGDGRRAGLTVVGTHLPHGGDATAMAVAAADGEGAYLDTATLTP 360 Query 378 DDDAALAAWLADPAKPKALHEAKAAVHDLAGRGWTLEGVTSDTALAAYLVRPGQRSFTLD 437 DDDAALAAWLADPAKPKALHEAKAAVHDLAGRGWTLEGVTSDTALAAYLVRPGQRSFTLD Sbjct 361 DDDAALAAWLADPAKPKALHEAKAAVHDLAGRGWTLEGVTSDTALAAYLVRPGQRSFTLD 420 Query 438 DLSLRYLRRELRAETPQQQQLSLLDDDDTDAETIQTTILRARAVIDLADALDAELARIDS 497 DLSLRYLRRELRAETPQQQQLSLLDDDDTDAETIQTTILRARAVIDLADALDAELARIDS Sbjct 421 DLSLRYLRRELRAETPQQQQLSLLDDDDTDAETIQTTILRARAVIDLADALDAELARIDS 480 Query 498 TALLGEMELPVQRVLAKMESAGIAVDLPMLTELQSQFGDQIRDAAEAAYGVIGKQINLGS 557 TALLGEMELPVQRVLAKMESAGIAVDLPMLTELQSQFGDQIRDAAEAAYGVIGKQINLGS Sbjct 481 TALLGEMELPVQRVLAKMESAGIAVDLPMLTELQSQFGDQIRDAAEAAYGVIGKQINLGS 540 Query 558 PKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFDKTGHPFLQHLLAHRDVTRLKVTVD 617 PKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFDKTGHPFLQHLLAHRDVTRLKVTVD Sbjct 541 PKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFDKTGHPFLQHLLAHRDVTRLKVTVD 600 Query 618 GLLQAVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAGRRIRDAFVVGDGYAELM 677 GLLQAVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAGRRIRDAFVVGDGYAELM Sbjct 601 GLLQAVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAGRRIRDAFVVGDGYAELM 660 Query 678 TADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFVASRAFGVPIDEVTGELRRRVKAMSY 737 TADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFVASRAFGVPIDEVTGELRRRVKAMSY Sbjct 661 TADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFVASRAFGVPIDEVTGELRRRVKAMSY 720 Query 738 GLAYGLSAYGLSQQLKISTEEANEQMDAYFARFGGVRDYLRAVVERARKDGYTSTVLGRR 797 GLAYGLSAYGLSQQLKISTEEANEQMDAYFARFGGVRDYLRAVVERARKDGYTSTVLGRR Sbjct 721 GLAYGLSAYGLSQQLKISTEEANEQMDAYFARFGGVRDYLRAVVERARKDGYTSTVLGRR 780 Query 798 RYLPELDSSNRQVREAA 814 RYLPELDSSNRQVREAA Sbjct 781 RYLPELDSSNRQVREAA 797 >gi|296164498|ref|ZP_06847069.1| DNA-directed DNA polymerase I [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295900098|gb|EFG79533.1| DNA-directed DNA polymerase I [Mycobacterium parascrofulaceum ATCC BAA-614] Length=906 Score = 1580 bits (4092), Expect = 0.0, Method: Compositional matrix adjust. Identities = 783/897 (88%), Positives = 835/897 (94%), Gaps = 3/897 (0%) Query 9 SEDRAKPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLRDEAPTHI 68 +E++ KPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLRDE PTH+ Sbjct 12 TEEQTKPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLRDETPTHV 71 Query 69 AAAFDVSRQTFRLQRYPEYKANRSSTPDEFAGQIDITKEVLGALGITVLSEPGFEADDLI 128 AAAFDVSRQTFR +RYPEYKANRSSTPDEF GQIDITKEVL ALGITVL+EPGFEADDLI Sbjct 72 AAAFDVSRQTFRSERYPEYKANRSSTPDEFHGQIDITKEVLNALGITVLAEPGFEADDLI 131 Query 129 ATLATQAENEGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVVEKYGLTPR 188 ATLATQAE+EG+RVLVVTGDRD+LQLVSDDVTVLYPRKGVSELTRFTPEAVVEKYGLTP Sbjct 132 ATLATQAEHEGFRVLVVTGDRDSLQLVSDDVTVLYPRKGVSELTRFTPEAVVEKYGLTPT 191 Query 189 QYPDFAALRGDPSDNLPGIPGVGEKTAAKWIAEYGSLRSLVDNVDAVRGKVGDALRANLA 248 QYPDFAALRGDPSDNLPGIPGVGEKTA+KWIAEYGSL+ LVDNVD+VRGKVGDALRANLA Sbjct 192 QYPDFAALRGDPSDNLPGIPGVGEKTASKWIAEYGSLQGLVDNVDSVRGKVGDALRANLA 251 Query 249 SVVRNRELTDLVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFDTLAAAGGP 308 V+RNRELTDLV+DVPLAQTPDTLR+QPWDRD IHRLFDDLEFRVLRDRLF+TLAA P Sbjct 252 GVIRNRELTDLVKDVPLAQTPDTLRMQPWDRDQIHRLFDDLEFRVLRDRLFETLAAVE-P 310 Query 309 EVDEGFDVRGGALAPGTVRQWLAEHAGDGRRAGLTVVGTHLPHGGDATAMAVAAADGEGA 368 EVD GFDVRGGAL PG + +WLAEH+ G+R GL VVGTHL + DATA+A+ +ADGEG Sbjct 311 EVDAGFDVRGGALQPGELAEWLAEHSA-GKRFGLAVVGTHLAYDADATALAIVSADGEGR 369 Query 369 YLDTATLTPDDDAALAAWLADPAKPKALHEAKAAVHDLAGRGWTLEGVTSDTALAAYLVR 428 Y+DT+ L PDD+AALA+WLADP PKALHEAK A+HDLAGRGWTL GVTSDTALAAYLVR Sbjct 370 YIDTSALQPDDEAALASWLADPGPPKALHEAKLAMHDLAGRGWTLAGVTSDTALAAYLVR 429 Query 429 PGQRSFTLDDLSLRYLRRELRAETPQQQQLSLLDDDD-TDAETIQTTILRARAVIDLADA 487 PGQRSF+L+DLSLRYLRRELRAET +QQQLSLLDD+D TD + +QT ILRA AV+DLADA Sbjct 430 PGQRSFSLEDLSLRYLRRELRAETAEQQQLSLLDDNDGTDDQAVQTLILRAVAVLDLADA 489 Query 488 LDAELARIDSTALLGEMELPVQRVLAKMESAGIAVDLPMLTELQSQFGDQIRDAAEAAYG 547 LD ELARI+ST+LLG MELPVQRVLA ME GIAVDL +L ELQS F QIRDAAEAAY Sbjct 490 LDEELARINSTSLLGGMELPVQRVLAGMEHTGIAVDLELLGELQSDFAHQIRDAAEAAYA 549 Query 548 VIGKQINLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFDKTGHPFLQHLLAHR 607 VIGKQINLGSPKQLQ VLFDEL MPKTKRTKTGYTTDADALQSLFDKTGHPFLQHLL HR Sbjct 550 VIGKQINLGSPKQLQTVLFDELEMPKTKRTKTGYTTDADALQSLFDKTGHPFLQHLLTHR 609 Query 608 DVTRLKVTVDGLLQAVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAGRRIRDAF 667 DVTRLKVTVDGLL +VA+DGRIHTTFNQTIAATGRLSSTEPNLQNIPIRT+AGRRIRDAF Sbjct 610 DVTRLKVTVDGLLASVASDGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTEAGRRIRDAF 669 Query 668 VVGDGYAELMTADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFVASRAFGVPIDEVTGE 727 VVGDGY+ELMTADYSQIEMRIMAHLS DEGLIEAFNTGEDLHSFVASRAFGVPI EVT E Sbjct 670 VVGDGYSELMTADYSQIEMRIMAHLSRDEGLIEAFNTGEDLHSFVASRAFGVPIGEVTAE 729 Query 728 LRRRVKAMSYGLAYGLSAYGLSQQLKISTEEANEQMDAYFARFGGVRDYLRAVVERARKD 787 LRRRVKAMSYGLAYGLSAYGLSQQLKISTEEA EQMDAYFARFGGVRDYL +V++ARKD Sbjct 730 LRRRVKAMSYGLAYGLSAYGLSQQLKISTEEAKEQMDAYFARFGGVRDYLMNIVDQARKD 789 Query 788 GYTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIQVDKALNEAQL 847 GYTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMI+VDKA+ EA L Sbjct 790 GYTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIEVDKAIKEAGL 849 Query 848 ASRMLLQVHDELLFEIAPGERERVEALVRDKMGGAYPLDVPLEVSVGYGRSWDAAAH 904 SRMLLQVHDELLFE+APGERER+EAL R+KMGGAYPLDVPLEVSVGYGRSWD+AAH Sbjct 850 KSRMLLQVHDELLFEVAPGERERLEALAREKMGGAYPLDVPLEVSVGYGRSWDSAAH 906 >gi|183982446|ref|YP_001850737.1| DNA polymerase I PolA [Mycobacterium marinum M] gi|183175772|gb|ACC40882.1| DNA polymerase I PolA [Mycobacterium marinum M] Length=899 Score = 1577 bits (4084), Expect = 0.0, Method: Compositional matrix adjust. Identities = 807/899 (90%), Positives = 840/899 (94%), Gaps = 1/899 (0%) Query 6 SAPSEDRAKPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLRDEAP 65 S +E KPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLRDEAP Sbjct 2 SVATEQSTKPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLRDEAP 61 Query 66 THIAAAFDVSRQTFRLQRYPEYKANRSSTPDEFAGQIDITKEVLGALGITVLSEPGFEAD 125 THIAAAFDVSRQTFR +RYPEYKANRSSTPDEF GQIDITKEVL ALGITVL+ PGFEAD Sbjct 62 THIAAAFDVSRQTFRSERYPEYKANRSSTPDEFHGQIDITKEVLNALGITVLAAPGFEAD 121 Query 126 DLIATLATQAENEGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVVEKYGL 185 D+IATLATQAE EGYRVLVVTGDRD+LQLVSDDVTVLYPRKGVSELTRFTPEAVVEKYGL Sbjct 122 DIIATLATQAEGEGYRVLVVTGDRDSLQLVSDDVTVLYPRKGVSELTRFTPEAVVEKYGL 181 Query 186 TPRQYPDFAALRGDPSDNLPGIPGVGEKTAAKWIAEYGSLRSLVDNVDAVRGKVGDALRA 245 TP QYPDFAALRGDPSDNLPGIPGVGEKTA+KWI EYGSL+ LVD VD+VRGKVGD+LRA Sbjct 182 TPVQYPDFAALRGDPSDNLPGIPGVGEKTASKWIVEYGSLQGLVDQVDSVRGKVGDSLRA 241 Query 246 NLASVVRNRELTDLVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFDTLAAA 305 NLASVVRNRELTDLVRDVPLAQTP+ LRLQPWDRD IHRLFDDLEFRVLRDRLFDTLAA Sbjct 242 NLASVVRNRELTDLVRDVPLAQTPEALRLQPWDRDQIHRLFDDLEFRVLRDRLFDTLAAV 301 Query 306 GGPEVDEGFDVRGGALAPGTVRQWLAEHAGDGRRAGLTVVGTHLPHGGDATAMAVAAADG 365 PEVD+GFDVRGGA++PG V QWLAEH DGRR GLTVVGTHLPHGGDATA+A+AAADG Sbjct 302 E-PEVDQGFDVRGGAVSPGAVAQWLAEHVVDGRRCGLTVVGTHLPHGGDATALAIAAADG 360 Query 366 EGAYLDTATLTPDDDAALAAWLADPAKPKALHEAKAAVHDLAGRGWTLEGVTSDTALAAY 425 EG Y+DTATLTPDDDAAL WLADPAKPKALHEAK A+HDL GRGWTL GVTSDTALAAY Sbjct 361 EGGYIDTATLTPDDDAALGEWLADPAKPKALHEAKLAIHDLRGRGWTLNGVTSDTALAAY 420 Query 426 LVRPGQRSFTLDDLSLRYLRRELRAETPQQQQLSLLDDDDTDAETIQTTILRARAVIDLA 485 LVRPGQRSFTLDDLSLRYLRRELRAETP+QQQLSLLDDDDTD QT ILRARAVIDLA Sbjct 421 LVRPGQRSFTLDDLSLRYLRRELRAETPEQQQLSLLDDDDTDVAAAQTAILRARAVIDLA 480 Query 486 DALDAELARIDSTALLGEMELPVQRVLAKMESAGIAVDLPMLTELQSQFGDQIRDAAEAA 545 DALDAEL RIDST LL +MELPVQ VLA+ME+AGIAVDL ML LQS F DQIRDAAEAA Sbjct 481 DALDAELDRIDSTGLLADMELPVQHVLAEMETAGIAVDLTMLGGLQSHFADQIRDAAEAA 540 Query 546 YGVIGKQINLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFDKTGHPFLQHLLA 605 Y VIGKQINLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFDKTGHPFLQHLLA Sbjct 541 YAVIGKQINLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFDKTGHPFLQHLLA 600 Query 606 HRDVTRLKVTVDGLLQAVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAGRRIRD 665 HRDVTRLKVTVDGLL +VA DGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAGR+IRD Sbjct 601 HRDVTRLKVTVDGLLNSVADDGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAGRQIRD 660 Query 666 AFVVGDGYAELMTADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFVASRAFGVPIDEVT 725 AFVVGDGY+ELMTADYSQIEMRIMAHLS DEGLIEAFNTGEDLHSFVASRAFGVPIDEVT Sbjct 661 AFVVGDGYSELMTADYSQIEMRIMAHLSRDEGLIEAFNTGEDLHSFVASRAFGVPIDEVT 720 Query 726 GELRRRVKAMSYGLAYGLSAYGLSQQLKISTEEANEQMDAYFARFGGVRDYLRAVVERAR 785 GELRRRVKAMSYGLAYGLSAYGLS QLKISTE+A QMD YF+RFGGVRDYL AVVE+AR Sbjct 721 GELRRRVKAMSYGLAYGLSAYGLSSQLKISTEDAKVQMDQYFSRFGGVRDYLMAVVEQAR 780 Query 786 KDGYTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIQVDKALNEA 845 KDGYTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMI+VDKAL E Sbjct 781 KDGYTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIEVDKALKEH 840 Query 846 QLASRMLLQVHDELLFEIAPGERERVEALVRDKMGGAYPLDVPLEVSVGYGRSWDAAAH 904 L SRMLLQVHDELLFE+A GERE++EALVRDKMG AYPLDVPLEVSVG+GRSWD+AAH Sbjct 841 ALKSRMLLQVHDELLFEVAAGEREQIEALVRDKMGSAYPLDVPLEVSVGFGRSWDSAAH 899 >gi|342860799|ref|ZP_08717449.1| DNA polymerase I [Mycobacterium colombiense CECT 3035] gi|342131823|gb|EGT85080.1| DNA polymerase I [Mycobacterium colombiense CECT 3035] Length=905 Score = 1567 bits (4057), Expect = 0.0, Method: Compositional matrix adjust. Identities = 778/902 (87%), Positives = 833/902 (93%), Gaps = 3/902 (0%) Query 4 TASAPSEDRAKPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLRDE 63 T SE+ PTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLRDE Sbjct 6 TTPKASEEETTPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLRDE 65 Query 64 APTHIAAAFDVSRQTFRLQRYPEYKANRSSTPDEFAGQIDITKEVLGALGITVLSEPGFE 123 APTHIAAAFDVSRQTFR +RYPEYKANRS+TPDEF GQIDITKEVL ALGITVL+E GFE Sbjct 66 APTHIAAAFDVSRQTFRSERYPEYKANRSATPDEFRGQIDITKEVLAALGITVLAEEGFE 125 Query 124 ADDLIATLATQAENEGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVVEKY 183 ADDLIATLATQAENEGYRVLVVTGDRD+LQLVSD+VTVLYPRKGVSELTRFTP+AVVEKY Sbjct 126 ADDLIATLATQAENEGYRVLVVTGDRDSLQLVSDNVTVLYPRKGVSELTRFTPDAVVEKY 185 Query 184 GLTPRQYPDFAALRGDPSDNLPGIPGVGEKTAAKWIAEYGSLRSLVDNVDAVRGKVGDAL 243 GLTPRQYPDFAALRGDPSDNLPGIPGVGEKTA+KWI EYGSL++LVDNVD+VRGKVGDAL Sbjct 186 GLTPRQYPDFAALRGDPSDNLPGIPGVGEKTASKWIGEYGSLQALVDNVDSVRGKVGDAL 245 Query 244 RANLASVVRNRELTDLVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFDTLA 303 R +LASV+RNRELTDLV+DVPLAQTPDTLRLQPWDRD IHRLFDDLEFRVLRDRLF+TLA Sbjct 246 REHLASVIRNRELTDLVKDVPLAQTPDTLRLQPWDRDQIHRLFDDLEFRVLRDRLFETLA 305 Query 304 AAGGPEVDEGFDVRGGALAPGTVRQWLAEHAGDGRRAGLTVVGTHLPHGGDATAMAVAAA 363 A PEVDEGFDVRGGAL G + WLAEH+ G+R GL VVGTHL + DATA+A+ +A Sbjct 306 AVE-PEVDEGFDVRGGALEAGELAVWLAEHSS-GKRFGLAVVGTHLAYDADATALAIVSA 363 Query 364 DGEGAYLDTATLTPDDDAALAAWLADPAKPKALHEAKAAVHDLAGRGWTLEGVTSDTALA 423 DGEG Y+DTATL P+D+AALA+WLADP PKALHEAK A+HDLAGRGWTL GVTSDTALA Sbjct 364 DGEGRYIDTATLDPEDEAALASWLADPGPPKALHEAKLAMHDLAGRGWTLAGVTSDTALA 423 Query 424 AYLVRPGQRSFTLDDLSLRYLRRELRAETPQQQQLSLLDDDD-TDAETIQTTILRARAVI 482 AYLVRPGQRSF+LDDLSLRYLRRELRAE P+QQQLSLLDD++ TD + +QT ILRA AV+ Sbjct 424 AYLVRPGQRSFSLDDLSLRYLRRELRAENPEQQQLSLLDDNEGTDDQAVQTLILRAVAVL 483 Query 483 DLADALDAELARIDSTALLGEMELPVQRVLAKMESAGIAVDLPMLTELQSQFGDQIRDAA 542 DLADALD ELARI+ST+LL MELPVQRVLA ME+AGIAVDL +L ELQS F QIRDAA Sbjct 484 DLADALDEELARINSTSLLSTMELPVQRVLAGMENAGIAVDLDLLGELQSDFAHQIRDAA 543 Query 543 EAAYGVIGKQINLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFDKTGHPFLQH 602 EAAY VIGKQINLGSPKQLQ VLFDEL MPKTKRTKTGYTTDADALQSLFDKTGHPFLQH Sbjct 544 EAAYAVIGKQINLGSPKQLQAVLFDELEMPKTKRTKTGYTTDADALQSLFDKTGHPFLQH 603 Query 603 LLAHRDVTRLKVTVDGLLQAVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAGRR 662 LL HRD TRLKVTVDGLL AVA+DGRIHTTFNQTIAATGRLSSTEPNLQNIPIRT+AGRR Sbjct 604 LLTHRDATRLKVTVDGLLNAVASDGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTEAGRR 663 Query 663 IRDAFVVGDGYAELMTADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFVASRAFGVPID 722 IRDAFVVGDGY+ELMTADYSQIEMRIMAHLS D GLIEAFNTGEDLHSFVASRAFGVPID Sbjct 664 IRDAFVVGDGYSELMTADYSQIEMRIMAHLSKDAGLIEAFNTGEDLHSFVASRAFGVPID 723 Query 723 EVTGELRRRVKAMSYGLAYGLSAYGLSQQLKISTEEANEQMDAYFARFGGVRDYLRAVVE 782 EVT ELRRRVKAMSYGLAYGLSAYGLS QLKISTEEA +QM+ YFARFGGVRDYL VVE Sbjct 724 EVTAELRRRVKAMSYGLAYGLSAYGLSAQLKISTEEAKDQMEQYFARFGGVRDYLMNVVE 783 Query 783 RARKDGYTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIQVDKAL 842 +ARKDG+TSTV GRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAM++VD+A+ Sbjct 784 QARKDGFTSTVFGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMLEVDRAI 843 Query 843 NEAQLASRMLLQVHDELLFEIAPGERERVEALVRDKMGGAYPLDVPLEVSVGYGRSWDAA 902 +A L+SR+LLQVHDELLFE+A GERE++EALVRDKMGGAYPLDVPLEVSVGYGRSWDAA Sbjct 844 KDAGLSSRILLQVHDELLFEVATGEREQLEALVRDKMGGAYPLDVPLEVSVGYGRSWDAA 903 Query 903 AH 904 AH Sbjct 904 AH 905 >gi|118617251|ref|YP_905583.1| DNA polymerase I [Mycobacterium ulcerans Agy99] gi|118569361|gb|ABL04112.1| DNA polymerase I PolA [Mycobacterium ulcerans Agy99] Length=899 Score = 1567 bits (4057), Expect = 0.0, Method: Compositional matrix adjust. Identities = 802/899 (90%), Positives = 837/899 (94%), Gaps = 1/899 (0%) Query 6 SAPSEDRAKPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLRDEAP 65 S +E KPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLRDEAP Sbjct 2 SVATEQSTKPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLRDEAP 61 Query 66 THIAAAFDVSRQTFRLQRYPEYKANRSSTPDEFAGQIDITKEVLGALGITVLSEPGFEAD 125 THIAAAFDVSRQTFR +RYPEYKANRSSTPDEF GQIDITKEVL ALGITVL+ PGFEAD Sbjct 62 THIAAAFDVSRQTFRSERYPEYKANRSSTPDEFHGQIDITKEVLNALGITVLAAPGFEAD 121 Query 126 DLIATLATQAENEGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVVEKYGL 185 D+IATLATQAE EGYRVLVVTGDRD+LQLVSDDVTVLYPRKGVSELTRFTPEAVVEKYGL Sbjct 122 DIIATLATQAEGEGYRVLVVTGDRDSLQLVSDDVTVLYPRKGVSELTRFTPEAVVEKYGL 181 Query 186 TPRQYPDFAALRGDPSDNLPGIPGVGEKTAAKWIAEYGSLRSLVDNVDAVRGKVGDALRA 245 TP QYPDFAALRGDPSDNLPGIPGVGEKTA+KWI EYGSL+ LVD VD+VRGKVGD+LRA Sbjct 182 TPVQYPDFAALRGDPSDNLPGIPGVGEKTASKWIVEYGSLQGLVDQVDSVRGKVGDSLRA 241 Query 246 NLASVVRNRELTDLVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFDTLAAA 305 NLASVVRNRELTDLVRDVPLAQTP+ L LQPWDRD IHRLFDDLEFRVLRDRLFDTLAA Sbjct 242 NLASVVRNRELTDLVRDVPLAQTPEVLLLQPWDRDQIHRLFDDLEFRVLRDRLFDTLAAV 301 Query 306 GGPEVDEGFDVRGGALAPGTVRQWLAEHAGDGRRAGLTVVGTHLPHGGDATAMAVAAADG 365 PEVD+GFDVRGGA++PG V QWLAEH DGRR GLTVVGTHLPHGGDATA+A+AAADG Sbjct 302 E-PEVDQGFDVRGGAVSPGAVAQWLAEHVVDGRRCGLTVVGTHLPHGGDATALAIAAADG 360 Query 366 EGAYLDTATLTPDDDAALAAWLADPAKPKALHEAKAAVHDLAGRGWTLEGVTSDTALAAY 425 EG Y+DTATLTPDDDAAL WLADPAKPKALHEAK A+HDL GRGWTL GVTSDTALAAY Sbjct 361 EGGYIDTATLTPDDDAALGEWLADPAKPKALHEAKLAIHDLRGRGWTLNGVTSDTALAAY 420 Query 426 LVRPGQRSFTLDDLSLRYLRRELRAETPQQQQLSLLDDDDTDAETIQTTILRARAVIDLA 485 LVRPGQRSFTLDDLSLRYLRRELRAETP+QQQLSLLDDDDTD QT ILRARAVIDLA Sbjct 421 LVRPGQRSFTLDDLSLRYLRRELRAETPEQQQLSLLDDDDTDVAAAQTAILRARAVIDLA 480 Query 486 DALDAELARIDSTALLGEMELPVQRVLAKMESAGIAVDLPMLTELQSQFGDQIRDAAEAA 545 DALDAEL RIDST LL +MELPVQ +LA+ME+AGIAVDL ML LQ F DQIRDAAEAA Sbjct 481 DALDAELDRIDSTGLLTDMELPVQHLLAEMETAGIAVDLTMLGGLQRHFADQIRDAAEAA 540 Query 546 YGVIGKQINLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFDKTGHPFLQHLLA 605 Y VIGKQINLGSPKQLQVVLFDEL MPKTKRTKTGYTTDADALQSLFDKTGHPFLQHLLA Sbjct 541 YAVIGKQINLGSPKQLQVVLFDELRMPKTKRTKTGYTTDADALQSLFDKTGHPFLQHLLA 600 Query 606 HRDVTRLKVTVDGLLQAVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAGRRIRD 665 HRDVTRLKVTVDGLL +VA DGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAGR+IRD Sbjct 601 HRDVTRLKVTVDGLLNSVADDGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAGRQIRD 660 Query 666 AFVVGDGYAELMTADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFVASRAFGVPIDEVT 725 AFVVGDGY+ELMTADYSQIEMRIMAHLS DEGLIEAFNTGEDLHSFVASRAFGVPIDEVT Sbjct 661 AFVVGDGYSELMTADYSQIEMRIMAHLSRDEGLIEAFNTGEDLHSFVASRAFGVPIDEVT 720 Query 726 GELRRRVKAMSYGLAYGLSAYGLSQQLKISTEEANEQMDAYFARFGGVRDYLRAVVERAR 785 GELRRRVKAMSYGLAYGLSAYGLS QLKISTE+A QMD YF+RFGGVRDYL AVVE+AR Sbjct 721 GELRRRVKAMSYGLAYGLSAYGLSSQLKISTEDAKVQMDQYFSRFGGVRDYLMAVVEQAR 780 Query 786 KDGYTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIQVDKALNEA 845 KDGYTSTVLGRRR+LPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMI+VDKAL E Sbjct 781 KDGYTSTVLGRRRHLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIEVDKALKEH 840 Query 846 QLASRMLLQVHDELLFEIAPGERERVEALVRDKMGGAYPLDVPLEVSVGYGRSWDAAAH 904 L SRMLLQVHDELLFE+A GERE++EALVRDKMG AYPLDVPLEVSVG+GRSWD+AAH Sbjct 841 ALKSRMLLQVHDELLFEVAAGEREQIEALVRDKMGSAYPLDVPLEVSVGFGRSWDSAAH 899 >gi|118462804|ref|YP_882339.1| DNA polymerase I [Mycobacterium avium 104] gi|118164091|gb|ABK64988.1| DNA polymerase I [Mycobacterium avium 104] Length=913 Score = 1565 bits (4053), Expect = 0.0, Method: Compositional matrix adjust. Identities = 783/896 (88%), Positives = 832/896 (93%), Gaps = 3/896 (0%) Query 10 EDRAKPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLRDEAPTHIA 69 E++ +PTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLRDEAPTHIA Sbjct 20 EEQNRPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLRDEAPTHIA 79 Query 70 AAFDVSRQTFRLQRYPEYKANRSSTPDEFAGQIDITKEVLGALGITVLSEPGFEADDLIA 129 AAFDVSRQTFR RYPEYKANRS+TPDEF GQIDITKEVL ALGITVL+EPGFEADDLIA Sbjct 80 AAFDVSRQTFRSDRYPEYKANRSATPDEFHGQIDITKEVLAALGITVLAEPGFEADDLIA 139 Query 130 TLATQAENEGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVVEKYGLTPRQ 189 TLATQAENEGYRVLVVTGDRD+LQLVSD+VTVLYPRKGVSELTRFTPEAVVEKYGLTP+Q Sbjct 140 TLATQAENEGYRVLVVTGDRDSLQLVSDNVTVLYPRKGVSELTRFTPEAVVEKYGLTPQQ 199 Query 190 YPDFAALRGDPSDNLPGIPGVGEKTAAKWIAEYGSLRSLVDNVDAVRGKVGDALRANLAS 249 YPDFAALRGDPSDNLPGIPGVGEKTA+KWIAEYGSL++LVDNVD+VRGKVGDALR +LAS Sbjct 200 YPDFAALRGDPSDNLPGIPGVGEKTASKWIAEYGSLQALVDNVDSVRGKVGDALREHLAS 259 Query 250 VVRNRELTDLVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFDTLAAAGGPE 309 V+RNRELTDL++DVPLAQTPDTLRLQPWDRD IHRLFDDLEFRVLRDRLF+TLAA PE Sbjct 260 VIRNRELTDLIKDVPLAQTPDTLRLQPWDRDQIHRLFDDLEFRVLRDRLFETLAAVE-PE 318 Query 310 VDEGFDVRGGALAPGTVRQWLAEHAGDGRRAGLTVVGTHLPHGGDATAMAVAAADGEGAY 369 VDEGFDVRGGAL G + WLAEH+ G+R GL V GTHL + D TA+A+ +ADGEG Y Sbjct 319 VDEGFDVRGGALEAGELAVWLAEHSS-GKRFGLAVAGTHLAYDADCTALAIVSADGEGRY 377 Query 370 LDTATLTPDDDAALAAWLADPAKPKALHEAKAAVHDLAGRGWTLEGVTSDTALAAYLVRP 429 +DT+ L PDD+AALA+WLADP PKALHEAK A+HDLAGRGWTL GVTSDTALAAYLVRP Sbjct 378 IDTSALDPDDEAALASWLADPGPPKALHEAKLAMHDLAGRGWTLAGVTSDTALAAYLVRP 437 Query 430 GQRSFTLDDLSLRYLRRELRAETPQQQQLSLLDDDDTDA-ETIQTTILRARAVIDLADAL 488 GQRSF+LDDL+LRYLRRELRAE PQQQQLSLLDD D + +QT ILRA AV+DLADAL Sbjct 438 GQRSFSLDDLALRYLRRELRAENPQQQQLSLLDDTDGTDDQAVQTLILRAVAVLDLADAL 497 Query 489 DAELARIDSTALLGEMELPVQRVLAKMESAGIAVDLPMLTELQSQFGDQIRDAAEAAYGV 548 D ELARI+ST+LL MELPVQRVLA ME AGIAVDL +L+ELQS F QIRDAAEAAY V Sbjct 498 DEELARINSTSLLSGMELPVQRVLAGMEKAGIAVDLDLLSELQSDFAHQIRDAAEAAYAV 557 Query 549 IGKQINLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFDKTGHPFLQHLLAHRD 608 IGKQINLGSPKQLQ VLFDEL MPKTKRTKTGYTTDADALQSLFDKTGHPFLQHLLAHRD Sbjct 558 IGKQINLGSPKQLQAVLFDELQMPKTKRTKTGYTTDADALQSLFDKTGHPFLQHLLAHRD 617 Query 609 VTRLKVTVDGLLQAVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAGRRIRDAFV 668 TRLKVTVDGLL +VA+DGRIHTTFNQTIAATGRLSSTEPNLQNIPIRT+AGRRIRDAFV Sbjct 618 ATRLKVTVDGLLNSVASDGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTEAGRRIRDAFV 677 Query 669 VGDGYAELMTADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFVASRAFGVPIDEVTGEL 728 VGDGYAELMTADYSQIEMRIMAHLS D GLIEAFNTGEDLHSFVASRAFGVPI+EVTGEL Sbjct 678 VGDGYAELMTADYSQIEMRIMAHLSQDAGLIEAFNTGEDLHSFVASRAFGVPIEEVTGEL 737 Query 729 RRRVKAMSYGLAYGLSAYGLSQQLKISTEEANEQMDAYFARFGGVRDYLRAVVERARKDG 788 RRRVKAMSYGLAYGLSAYGLSQQLKISTEEA EQMDAYFARFGGVRDYL AVVE+ARKDG Sbjct 738 RRRVKAMSYGLAYGLSAYGLSQQLKISTEEAKEQMDAYFARFGGVRDYLHAVVEQARKDG 797 Query 789 YTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIQVDKALNEAQLA 848 YTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMI+VDKA+ EA L Sbjct 798 YTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIEVDKAIKEAGLQ 857 Query 849 SRMLLQVHDELLFEIAPGERERVEALVRDKMGGAYPLDVPLEVSVGYGRSWDAAAH 904 SR+LLQVHDELLFE+A GERE++EAL RDKMGGAYPLDVPLEVSVGYGRSWDAAAH Sbjct 858 SRILLQVHDELLFEVAAGEREQLEALARDKMGGAYPLDVPLEVSVGYGRSWDAAAH 913 >gi|336457772|gb|EGO36766.1| DNA polymerase I [Mycobacterium avium subsp. paratuberculosis S397] Length=913 Score = 1565 bits (4051), Expect = 0.0, Method: Compositional matrix adjust. Identities = 783/896 (88%), Positives = 833/896 (93%), Gaps = 3/896 (0%) Query 10 EDRAKPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLRDEAPTHIA 69 E++ +PTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLRDEAPTHIA Sbjct 20 EEQNRPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLRDEAPTHIA 79 Query 70 AAFDVSRQTFRLQRYPEYKANRSSTPDEFAGQIDITKEVLGALGITVLSEPGFEADDLIA 129 AAFDVSRQTFR RYPEYKANRS+TPDEF GQIDITKEVL ALGITVL+EPGFEADDLIA Sbjct 80 AAFDVSRQTFRSDRYPEYKANRSATPDEFHGQIDITKEVLAALGITVLAEPGFEADDLIA 139 Query 130 TLATQAENEGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVVEKYGLTPRQ 189 TLATQAENEGYRVLVVTGDRD+LQLVSD+VTVLYPRKGVSELTRFTPEAVVEKYGLTP+Q Sbjct 140 TLATQAENEGYRVLVVTGDRDSLQLVSDNVTVLYPRKGVSELTRFTPEAVVEKYGLTPQQ 199 Query 190 YPDFAALRGDPSDNLPGIPGVGEKTAAKWIAEYGSLRSLVDNVDAVRGKVGDALRANLAS 249 YPDFAALRGDPSDNLPGIPGVGEKTA+KWIAEYGSL++LVDNVD+VRGKVGDALR +LAS Sbjct 200 YPDFAALRGDPSDNLPGIPGVGEKTASKWIAEYGSLQALVDNVDSVRGKVGDALREHLAS 259 Query 250 VVRNRELTDLVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFDTLAAAGGPE 309 V+RNRELTDL++DVPLAQTPDTLRLQPWDRD IHRLFDDLEFRVLRDRLF+TLAA PE Sbjct 260 VIRNRELTDLIKDVPLAQTPDTLRLQPWDRDQIHRLFDDLEFRVLRDRLFETLAAVE-PE 318 Query 310 VDEGFDVRGGALAPGTVRQWLAEHAGDGRRAGLTVVGTHLPHGGDATAMAVAAADGEGAY 369 VDEGFDVRGGAL G + WLAEH+ G+R GL V GTHL + D TA+A+ +ADGEG Y Sbjct 319 VDEGFDVRGGALEAGELAVWLAEHSS-GKRFGLAVAGTHLAYDADCTALAIVSADGEGRY 377 Query 370 LDTATLTPDDDAALAAWLADPAKPKALHEAKAAVHDLAGRGWTLEGVTSDTALAAYLVRP 429 +DT+ L PDD+AALA+WLADP PKALHEAK A+HDLAGRGWTL GVTSDTALAAYLVRP Sbjct 378 IDTSALDPDDEAALASWLADPGPPKALHEAKLAMHDLAGRGWTLAGVTSDTALAAYLVRP 437 Query 430 GQRSFTLDDLSLRYLRRELRAETPQQQQLSLLDDDDTDA-ETIQTTILRARAVIDLADAL 488 GQRSF+LDDL+LRYLRRELRAE PQQQQLSLLDD D + +QT ILRA AV+DLADAL Sbjct 438 GQRSFSLDDLALRYLRRELRAENPQQQQLSLLDDTDGTDDQAVQTLILRAVAVLDLADAL 497 Query 489 DAELARIDSTALLGEMELPVQRVLAKMESAGIAVDLPMLTELQSQFGDQIRDAAEAAYGV 548 D ELARI+ST+LL MELPVQRVLA ME+AGIAVDL +L+ELQS F QIRDAAEAAY V Sbjct 498 DEELARINSTSLLSGMELPVQRVLAGMENAGIAVDLDLLSELQSDFAHQIRDAAEAAYAV 557 Query 549 IGKQINLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFDKTGHPFLQHLLAHRD 608 IGKQINLGSPKQLQ VLFDEL MPKTKRTKTGYTTDADALQSLFDKTGHPFLQHLLAHRD Sbjct 558 IGKQINLGSPKQLQAVLFDELQMPKTKRTKTGYTTDADALQSLFDKTGHPFLQHLLAHRD 617 Query 609 VTRLKVTVDGLLQAVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAGRRIRDAFV 668 TRLKVTVDGLL +VA+DGRIHTTFNQTIAATGRLSSTEPNLQNIPIRT+AGRRIRDAFV Sbjct 618 ATRLKVTVDGLLNSVASDGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTEAGRRIRDAFV 677 Query 669 VGDGYAELMTADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFVASRAFGVPIDEVTGEL 728 VGDGYAELMTADYSQIEMRIMAHLS D GLIEAFNTGEDLHSFVASRAFGVPI+EVTGEL Sbjct 678 VGDGYAELMTADYSQIEMRIMAHLSQDAGLIEAFNTGEDLHSFVASRAFGVPIEEVTGEL 737 Query 729 RRRVKAMSYGLAYGLSAYGLSQQLKISTEEANEQMDAYFARFGGVRDYLRAVVERARKDG 788 RRRVKAMSYGLAYGLSAYGLSQQLKISTEEA EQMDAYFARFGGVRDYL AVVE+ARKDG Sbjct 738 RRRVKAMSYGLAYGLSAYGLSQQLKISTEEAKEQMDAYFARFGGVRDYLHAVVEQARKDG 797 Query 789 YTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIQVDKALNEAQLA 848 YTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMI+VDKA+ EA L Sbjct 798 YTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIEVDKAIKEAGLR 857 Query 849 SRMLLQVHDELLFEIAPGERERVEALVRDKMGGAYPLDVPLEVSVGYGRSWDAAAH 904 SR+LLQVHDELLFE+A GERE++EAL RDKMGGAYPLDVPLEVSVGYGRSWDAAAH Sbjct 858 SRILLQVHDELLFEVAAGEREQLEALARDKMGGAYPLDVPLEVSVGYGRSWDAAAH 913 >gi|41407420|ref|NP_960256.1| DNA polymerase I [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395772|gb|AAS03639.1| PolA [Mycobacterium avium subsp. paratuberculosis K-10] Length=919 Score = 1564 bits (4050), Expect = 0.0, Method: Compositional matrix adjust. Identities = 782/896 (88%), Positives = 833/896 (93%), Gaps = 3/896 (0%) Query 10 EDRAKPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLRDEAPTHIA 69 E++ +PTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLRDEAPTHIA Sbjct 26 EEQNRPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLRDEAPTHIA 85 Query 70 AAFDVSRQTFRLQRYPEYKANRSSTPDEFAGQIDITKEVLGALGITVLSEPGFEADDLIA 129 AAFDVSRQTFR RYPEYKANRS+TPDEF GQIDITKEVL ALGITVL+EPGFEADDLIA Sbjct 86 AAFDVSRQTFRSDRYPEYKANRSATPDEFHGQIDITKEVLAALGITVLAEPGFEADDLIA 145 Query 130 TLATQAENEGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVVEKYGLTPRQ 189 TLATQAENEGYRVLVVTGDRD+LQLVSD+VTVLYPRKGVSELTRFTPEAVVEKYGLTP+Q Sbjct 146 TLATQAENEGYRVLVVTGDRDSLQLVSDNVTVLYPRKGVSELTRFTPEAVVEKYGLTPQQ 205 Query 190 YPDFAALRGDPSDNLPGIPGVGEKTAAKWIAEYGSLRSLVDNVDAVRGKVGDALRANLAS 249 YPDFAALRGDPSDNLPGIPGVGEKTA+KWIAEYGSL++LVDNVD+VRGKVGDALR +LAS Sbjct 206 YPDFAALRGDPSDNLPGIPGVGEKTASKWIAEYGSLQALVDNVDSVRGKVGDALREHLAS 265 Query 250 VVRNRELTDLVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFDTLAAAGGPE 309 V+RNRELTDL++DVPLAQTPDTLRLQPWDRD IHRLFDDLEFR+LRDRLF+TLAA PE Sbjct 266 VIRNRELTDLIKDVPLAQTPDTLRLQPWDRDQIHRLFDDLEFRMLRDRLFETLAAVE-PE 324 Query 310 VDEGFDVRGGALAPGTVRQWLAEHAGDGRRAGLTVVGTHLPHGGDATAMAVAAADGEGAY 369 VDEGFDVRGGAL G + WLAEH+ G+R GL V GTHL + D TA+A+ +ADGEG Y Sbjct 325 VDEGFDVRGGALEAGELAVWLAEHSS-GKRFGLAVAGTHLAYDADCTALAIVSADGEGRY 383 Query 370 LDTATLTPDDDAALAAWLADPAKPKALHEAKAAVHDLAGRGWTLEGVTSDTALAAYLVRP 429 +DT+ L PDD+AALA+WLADP PKALHEAK A+HDLAGRGWTL GVTSDTALAAYLVRP Sbjct 384 IDTSALDPDDEAALASWLADPGPPKALHEAKLAMHDLAGRGWTLAGVTSDTALAAYLVRP 443 Query 430 GQRSFTLDDLSLRYLRRELRAETPQQQQLSLLDDDDTDA-ETIQTTILRARAVIDLADAL 488 GQRSF+LDDL+LRYLRRELRAE PQQQQLSLLDD D + +QT ILRA AV+DLADAL Sbjct 444 GQRSFSLDDLALRYLRRELRAENPQQQQLSLLDDTDGTDDQAVQTLILRAVAVLDLADAL 503 Query 489 DAELARIDSTALLGEMELPVQRVLAKMESAGIAVDLPMLTELQSQFGDQIRDAAEAAYGV 548 D ELARI+ST+LL MELPVQRVLA ME+AGIAVDL +L+ELQS F QIRDAAEAAY V Sbjct 504 DEELARINSTSLLSGMELPVQRVLAGMENAGIAVDLDLLSELQSDFAHQIRDAAEAAYAV 563 Query 549 IGKQINLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFDKTGHPFLQHLLAHRD 608 IGKQINLGSPKQLQ VLFDEL MPKTKRTKTGYTTDADALQSLFDKTGHPFLQHLLAHRD Sbjct 564 IGKQINLGSPKQLQAVLFDELQMPKTKRTKTGYTTDADALQSLFDKTGHPFLQHLLAHRD 623 Query 609 VTRLKVTVDGLLQAVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAGRRIRDAFV 668 TRLKVTVDGLL +VA+DGRIHTTFNQTIAATGRLSSTEPNLQNIPIRT+AGRRIRDAFV Sbjct 624 ATRLKVTVDGLLNSVASDGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTEAGRRIRDAFV 683 Query 669 VGDGYAELMTADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFVASRAFGVPIDEVTGEL 728 VGDGYAELMTADYSQIEMRIMAHLS D GLIEAFNTGEDLHSFVASRAFGVPI+EVTGEL Sbjct 684 VGDGYAELMTADYSQIEMRIMAHLSQDAGLIEAFNTGEDLHSFVASRAFGVPIEEVTGEL 743 Query 729 RRRVKAMSYGLAYGLSAYGLSQQLKISTEEANEQMDAYFARFGGVRDYLRAVVERARKDG 788 RRRVKAMSYGLAYGLSAYGLSQQLKISTEEA EQMDAYFARFGGVRDYL AVVE+ARKDG Sbjct 744 RRRVKAMSYGLAYGLSAYGLSQQLKISTEEAKEQMDAYFARFGGVRDYLHAVVEQARKDG 803 Query 789 YTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIQVDKALNEAQLA 848 YTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMI+VDKA+ EA L Sbjct 804 YTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIEVDKAIKEAGLR 863 Query 849 SRMLLQVHDELLFEIAPGERERVEALVRDKMGGAYPLDVPLEVSVGYGRSWDAAAH 904 SR+LLQVHDELLFE+A GERE++EAL RDKMGGAYPLDVPLEVSVGYGRSWDAAAH Sbjct 864 SRILLQVHDELLFEVAAGEREQLEALARDKMGGAYPLDVPLEVSVGYGRSWDAAAH 919 >gi|254775605|ref|ZP_05217121.1| DNA polymerase I [Mycobacterium avium subsp. avium ATCC 25291] Length=913 Score = 1564 bits (4049), Expect = 0.0, Method: Compositional matrix adjust. Identities = 782/896 (88%), Positives = 832/896 (93%), Gaps = 3/896 (0%) Query 10 EDRAKPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLRDEAPTHIA 69 E++ +PTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLRDEAPTHIA Sbjct 20 EEQNRPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLRDEAPTHIA 79 Query 70 AAFDVSRQTFRLQRYPEYKANRSSTPDEFAGQIDITKEVLGALGITVLSEPGFEADDLIA 129 AAFDVSRQTFR RYPEYKANRS+TPDEF GQIDITKEVL ALGITVL+EPGFEADDLIA Sbjct 80 AAFDVSRQTFRSDRYPEYKANRSATPDEFHGQIDITKEVLAALGITVLAEPGFEADDLIA 139 Query 130 TLATQAENEGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVVEKYGLTPRQ 189 TLATQAENEGYRVLVVTGDRD+LQLVSD+VTVLYPRKGVSELTRFTPEAVVEKYGLTP+Q Sbjct 140 TLATQAENEGYRVLVVTGDRDSLQLVSDNVTVLYPRKGVSELTRFTPEAVVEKYGLTPQQ 199 Query 190 YPDFAALRGDPSDNLPGIPGVGEKTAAKWIAEYGSLRSLVDNVDAVRGKVGDALRANLAS 249 YPDFAALRGDPSDNLPGIPGVGEKTA+KWIAEYGSL++LVDNVD+VRGKVGDALR +LAS Sbjct 200 YPDFAALRGDPSDNLPGIPGVGEKTASKWIAEYGSLQALVDNVDSVRGKVGDALREHLAS 259 Query 250 VVRNRELTDLVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFDTLAAAGGPE 309 V+RNRELTDL++DVPLAQTPDTLRLQPWDRD IHRLFDDLEFRVLRDRLF+TLAA PE Sbjct 260 VIRNRELTDLIKDVPLAQTPDTLRLQPWDRDQIHRLFDDLEFRVLRDRLFETLAAVE-PE 318 Query 310 VDEGFDVRGGALAPGTVRQWLAEHAGDGRRAGLTVVGTHLPHGGDATAMAVAAADGEGAY 369 VDEGFDVRGGAL G + WLAEH+ G+R GL V GTHL + D TA+A+ +ADGEG Y Sbjct 319 VDEGFDVRGGALEAGELAVWLAEHSS-GKRFGLAVAGTHLAYDADCTALAIVSADGEGRY 377 Query 370 LDTATLTPDDDAALAAWLADPAKPKALHEAKAAVHDLAGRGWTLEGVTSDTALAAYLVRP 429 +DT+ L PDD+AALA+WLADP PKALHEAK A+HDLAGRGWTL GVTSDTALAAYLVRP Sbjct 378 IDTSALDPDDEAALASWLADPGPPKALHEAKLAMHDLAGRGWTLAGVTSDTALAAYLVRP 437 Query 430 GQRSFTLDDLSLRYLRRELRAETPQQQQLSLLDDDDTDA-ETIQTTILRARAVIDLADAL 488 GQRSF+LDDL+LRYLRRELRAE PQQQQLSLLDD D + +QT ILRA AV+DLADAL Sbjct 438 GQRSFSLDDLALRYLRRELRAENPQQQQLSLLDDTDGTDDQAVQTLILRAVAVLDLADAL 497 Query 489 DAELARIDSTALLGEMELPVQRVLAKMESAGIAVDLPMLTELQSQFGDQIRDAAEAAYGV 548 D ELARI+ST+LL MELPVQRVLA ME+AGIAVDL +L+ELQS F QIRDAAEAAY V Sbjct 498 DEELARINSTSLLSGMELPVQRVLAGMENAGIAVDLDLLSELQSDFAHQIRDAAEAAYAV 557 Query 549 IGKQINLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFDKTGHPFLQHLLAHRD 608 IGKQINLGSPKQLQ VLFDEL MPKTKRTKTGYTTDADALQSLFDKTGHPFLQHLLAHRD Sbjct 558 IGKQINLGSPKQLQAVLFDELQMPKTKRTKTGYTTDADALQSLFDKTGHPFLQHLLAHRD 617 Query 609 VTRLKVTVDGLLQAVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAGRRIRDAFV 668 TRLKVTVDGLL +VA+DGRIHTTFNQTIAATGRLSSTEPNLQNIPIRT+AGRR RDAFV Sbjct 618 ATRLKVTVDGLLNSVASDGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTEAGRRTRDAFV 677 Query 669 VGDGYAELMTADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFVASRAFGVPIDEVTGEL 728 VGDGYAELMTADYSQIEMRIMAHLS D GLIEAFNTGEDLHSFVASRAFGVPI+EVTGEL Sbjct 678 VGDGYAELMTADYSQIEMRIMAHLSQDAGLIEAFNTGEDLHSFVASRAFGVPIEEVTGEL 737 Query 729 RRRVKAMSYGLAYGLSAYGLSQQLKISTEEANEQMDAYFARFGGVRDYLRAVVERARKDG 788 RRRVKAMSYGLAYGLSAYGLSQQLKISTEEA EQMDAYFARFGGVRDYL AVVE+ARKDG Sbjct 738 RRRVKAMSYGLAYGLSAYGLSQQLKISTEEAKEQMDAYFARFGGVRDYLHAVVEQARKDG 797 Query 789 YTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIQVDKALNEAQLA 848 YTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMI+VDKA+ EA L Sbjct 798 YTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIEVDKAIKEAGLQ 857 Query 849 SRMLLQVHDELLFEIAPGERERVEALVRDKMGGAYPLDVPLEVSVGYGRSWDAAAH 904 SR+LLQVHDELLFE+A GERE++EAL RDKMGGAYPLDVPLEVSVGYGRSWDAAAH Sbjct 858 SRILLQVHDELLFEVAAGEREQLEALARDKMGGAYPLDVPLEVSVGYGRSWDAAAH 913 >gi|254820981|ref|ZP_05225982.1| DNA polymerase I [Mycobacterium intracellulare ATCC 13950] Length=908 Score = 1557 bits (4031), Expect = 0.0, Method: Compositional matrix adjust. Identities = 778/902 (87%), Positives = 835/902 (93%), Gaps = 3/902 (0%) Query 4 TASAPSEDRAKPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLRDE 63 TA+ SE++ +PTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLRDE Sbjct 9 TATKASEEQTRPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLRDE 68 Query 64 APTHIAAAFDVSRQTFRLQRYPEYKANRSSTPDEFAGQIDITKEVLGALGITVLSEPGFE 123 APTHIAAAFDVSRQTFR +RYPEYKANRS+TPDEF GQIDITKEVL ALGITVL+EPGFE Sbjct 69 APTHIAAAFDVSRQTFRSERYPEYKANRSATPDEFHGQIDITKEVLAALGITVLAEPGFE 128 Query 124 ADDLIATLATQAENEGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVVEKY 183 ADDLIATLATQAENEGYRVLVVTGDRD+LQLVS++VTVLYPRKGVSELTRFTP+AVVEKY Sbjct 129 ADDLIATLATQAENEGYRVLVVTGDRDSLQLVSENVTVLYPRKGVSELTRFTPDAVVEKY 188 Query 184 GLTPRQYPDFAALRGDPSDNLPGIPGVGEKTAAKWIAEYGSLRSLVDNVDAVRGKVGDAL 243 GLTP QYPDFAALRGDPSDNLPGIPGVGEKTA+KWI EYGSL++LVDNVD+VRGKVGDAL Sbjct 189 GLTPTQYPDFAALRGDPSDNLPGIPGVGEKTASKWIGEYGSLQALVDNVDSVRGKVGDAL 248 Query 244 RANLASVVRNRELTDLVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFDTLA 303 R +LASV+RNRELTDLV+DVPLAQTPDTLRLQPWDRD IHRLFDDLEFRVLRDRLF+TLA Sbjct 249 REHLASVIRNRELTDLVKDVPLAQTPDTLRLQPWDRDQIHRLFDDLEFRVLRDRLFETLA 308 Query 304 AAGGPEVDEGFDVRGGALAPGTVRQWLAEHAGDGRRAGLTVVGTHLPHGGDATAMAVAAA 363 A PEVDEGFDVRGGAL G + WLAEH+ G+R GL VVGTHL + DATA+A+ +A Sbjct 309 AVE-PEVDEGFDVRGGALEAGELAVWLAEHSS-GKRFGLAVVGTHLAYDADATALAIVSA 366 Query 364 DGEGAYLDTATLTPDDDAALAAWLADPAKPKALHEAKAAVHDLAGRGWTLEGVTSDTALA 423 DGEG Y+DTATL P+D+AALA+WLADP PKALHEAK A+HDLAGRGWTL GVTSDTALA Sbjct 367 DGEGRYIDTATLDPEDEAALASWLADPGPPKALHEAKLAMHDLAGRGWTLAGVTSDTALA 426 Query 424 AYLVRPGQRSFTLDDLSLRYLRRELRAETPQQQQLSLLDDDDTDA-ETIQTTILRARAVI 482 AYLVRPGQRSF+LDDLSLRYLRRELRAE P+QQQLSLLDD D + +QT +LRA AV+ Sbjct 427 AYLVRPGQRSFSLDDLSLRYLRRELRAENPEQQQLSLLDDTDGTDDQAVQTLLLRAVAVL 486 Query 483 DLADALDAELARIDSTALLGEMELPVQRVLAKMESAGIAVDLPMLTELQSQFGDQIRDAA 542 DLADALD ELARI+ST+LL MELPVQRVLA ME+AGIAVDL +LTELQS F IRDAA Sbjct 487 DLADALDEELARINSTSLLSGMELPVQRVLAGMENAGIAVDLELLTELQSDFAHLIRDAA 546 Query 543 EAAYGVIGKQINLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFDKTGHPFLQH 602 EAAY VIGKQINLGSPKQLQ VLFDEL MPKTKRTKTGYTTDADALQSLFDKTGHPFLQH Sbjct 547 EAAYAVIGKQINLGSPKQLQAVLFDELEMPKTKRTKTGYTTDADALQSLFDKTGHPFLQH 606 Query 603 LLAHRDVTRLKVTVDGLLQAVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAGRR 662 LLAHRD TRLKVTVDGLL +VA+DGRIHTTFNQTIAATGRLSSTEPNLQNIPIRT+AGRR Sbjct 607 LLAHRDATRLKVTVDGLLNSVASDGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTEAGRR 666 Query 663 IRDAFVVGDGYAELMTADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFVASRAFGVPID 722 IRDAFVVGDGY+ELMTADYSQIEMRIMAHLS DEGLIEAFNTGEDLHSFVASRAFGVPI+ Sbjct 667 IRDAFVVGDGYSELMTADYSQIEMRIMAHLSKDEGLIEAFNTGEDLHSFVASRAFGVPIE 726 Query 723 EVTGELRRRVKAMSYGLAYGLSAYGLSQQLKISTEEANEQMDAYFARFGGVRDYLRAVVE 782 EVT ELRRRVKAMSYGLAYGLSAYGLS QLKISTEEA +QM+ YFARFGGVRDYL AVVE Sbjct 727 EVTAELRRRVKAMSYGLAYGLSAYGLSAQLKISTEEAKDQMEQYFARFGGVRDYLMAVVE 786 Query 783 RARKDGYTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIQVDKAL 842 +ARKDGYTSTV GRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMI+ DKA+ Sbjct 787 QARKDGYTSTVFGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIETDKAI 846 Query 843 NEAQLASRMLLQVHDELLFEIAPGERERVEALVRDKMGGAYPLDVPLEVSVGYGRSWDAA 902 +A L+SR+LLQVHDELLFE+A GERE++EAL RDKMGGAYPLDVPLEVSVGYGRSWDAA Sbjct 847 KDAGLSSRILLQVHDELLFEVAAGEREQLEALARDKMGGAYPLDVPLEVSVGYGRSWDAA 906 Query 903 AH 904 AH Sbjct 907 AH 908 >gi|467163|gb|AAA50927.1| polI [Mycobacterium leprae] Length=907 Score = 1531 bits (3963), Expect = 0.0, Method: Compositional matrix adjust. Identities = 768/902 (86%), Positives = 825/902 (92%), Gaps = 6/902 (0%) Query 9 SEDRAKPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLRDEAPTHI 68 ED KP LMLLDGNSLAFRAFYALP ENFKTRGGLTTNAVYGFTAMLINLLR+EAPTHI Sbjct 6 CEDHTKPMLMLLDGNSLAFRAFYALPTENFKTRGGLTTNAVYGFTAMLINLLREEAPTHI 65 Query 69 AAAFDVSRQTFRLQRYPEYKANRSSTPDEFAGQIDITKEVLGALGITVLSEPGFEADDLI 128 AAAFDVSR+TFR + Y YKANRSS P EF GQIDITKEVLGALGITV +E GFEADDLI Sbjct 66 AAAFDVSRKTFRSECYAGYKANRSSIPAEFHGQIDITKEVLGALGITVFAEAGFEADDLI 125 Query 129 ATLATQAENEGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVVEKYGLTPR 188 ATLATQAENEGYRVLVVTGDRDALQLVS+DVTVLYPRKGVSELTRFTPEAV+EKYG+TP Sbjct 126 ATLATQAENEGYRVLVVTGDRDALQLVSNDVTVLYPRKGVSELTRFTPEAVIEKYGVTPA 185 Query 189 QYPDFAALRGDPSDNLPGIPGVGEKTAAKWIAEYGSLRSLVDNVDAVRGKVGDALRANLA 248 QYPD AALRGDPSDNLPGIPGVGEKTAAKWI +YGSL+ LVDNV++VRGKVG+ALR +LA Sbjct 186 QYPDLAALRGDPSDNLPGIPGVGEKTAAKWIVDYGSLQGLVDNVESVRGKVGEALRTHLA 245 Query 249 SVVRNRELTDLVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFDTLAAAGG- 307 SVVRNRELT+LV+DVPL QT DTLRLQPWDRD IHRLFD+LEFRVLRDRLF+ LAAAG Sbjct 246 SVVRNRELTELVKDVPLVQTSDTLRLQPWDRDRIHRLFDNLEFRVLRDRLFEALAAAGER 305 Query 308 -PEVDEGFDVRGGALAPGTVRQWLAEHAGDGRRAGLTVVGTHLPHGGDATAMAVAAADGE 366 PEVDEGFDVRGG L GTV +WLA+HA DGRR+GL +VGTHLPHGGDATA+AVAAADG Sbjct 306 VPEVDEGFDVRGGLLESGTVGRWLAKHADDGRRSGLAIVGTHLPHGGDATALAVAAADGN 365 Query 367 GAYLDTATLTPDDDAALAAWLADPAKPKALHEAKAAVHDLAGRGWTLEGVTSDTALAAYL 426 G Y+DTA LTPDDD ALAAWLADP PKALHEAK A+HDLAGRGWTL G+TSDTALAAYL Sbjct 366 GGYIDTAMLTPDDDDALAAWLADPDNPKALHEAKLAMHDLAGRGWTLGGITSDTALAAYL 425 Query 427 VRPGQRSFTLDDLSLRYLRRELRAETPQQQQLSLLDD-DDTDAETIQTTILRARAVIDLA 485 VRPGQRSFTLDDLSLRYLRRELRAETP+Q+Q SLLD+ D+ D + IQT ILRARAV+DLA Sbjct 426 VRPGQRSFTLDDLSLRYLRRELRAETPEQEQFSLLDNVDEVDKQAIQTLILRARAVVDLA 485 Query 486 DALDAELARIDSTALLGEMELPVQRVLAKMESAGIAVDLPMLTELQSQFGDQIRDAAEAA 545 ALDAEL IDST+LLGEMELPVQ+VLA ME AGIA DL +LTELQSQFGDQIRDAAEAA Sbjct 486 AALDAELDLIDSTSLLGEMELPVQQVLADMEKAGIAADLRLLTELQSQFGDQIRDAAEAA 545 Query 546 YGVIGKQINLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFDKTGHPFLQHLLA 605 Y VIGKQINL SPKQLQVVLF+ELGMPKTKRTKTGYTTDADALQSLF KT HPFLQHLL Sbjct 546 YAVIGKQINLSSPKQLQVVLFEELGMPKTKRTKTGYTTDADALQSLFCKTEHPFLQHLLT 605 Query 606 HRDVTRLKVTVDGLLQAVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAGRRIRD 665 HRDVTRLKVTVDGLL AVAADGRIHTTFNQTIA TGRLSSTEPNLQNIPIRT+AGR+IRD Sbjct 606 HRDVTRLKVTVDGLLNAVAADGRIHTTFNQTIATTGRLSSTEPNLQNIPIRTNAGRQIRD 665 Query 666 AFVVG---DGYAELMTADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFVASRAFGVPID 722 AFVVG +GY ELMTADYSQIEMRIMAHLS DEGLIEAF+TGEDLHSFVASRAFG+PI+ Sbjct 666 AFVVGSENNGYTELMTADYSQIEMRIMAHLSRDEGLIEAFHTGEDLHSFVASRAFGIPIE 725 Query 723 EVTGELRRRVKAMSYGLAYGLSAYGLSQQLKISTEEANEQMDAYFARFGGVRDYLRAVVE 782 ++T ELRRRVKAMSYGLAYGLSAYGL+ QLKISTEEA QM+ YFARFGGVRDYL VVE Sbjct 726 DITPELRRRVKAMSYGLAYGLSAYGLATQLKISTEEAKLQMEQYFARFGGVRDYLMDVVE 785 Query 783 RARKDGYTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIQVDKAL 842 +ARKDGYTSTVLGRRRYLPELDSSNRQ+REAAERAALNAPIQGSAADIIKVAMI VDK+L Sbjct 786 QARKDGYTSTVLGRRRYLPELDSSNRQIREAAERAALNAPIQGSAADIIKVAMIAVDKSL 845 Query 843 NEAQLASRMLLQVHDELLFEIAPGERERVEALVRDKMGGAYPLDVPLEVSVGYGRSWDAA 902 +A+LASRMLLQVHDELLFE+A GERE++EA+VR++MG AYPLDVPLEVSVG+GRSW AA Sbjct 846 KQAKLASRMLLQVHDELLFEVAIGEREQIEAMVREQMGSAYPLDVPLEVSVGFGRSWGAA 905 Query 903 AH 904 AH Sbjct 906 AH 907 >gi|15827719|ref|NP_301982.1| DNA polymerase I [Mycobacterium leprae TN] gi|221230196|ref|YP_002503612.1| DNA polymerase I [Mycobacterium leprae Br4923] gi|1169403|sp|P46835.1|DPO1_MYCLE RecName: Full=DNA polymerase I; Short=POL I gi|559913|emb|CAA86364.1| DNA polymerase I [Mycobacterium leprae] gi|13093270|emb|CAC31762.1| DNA polymerase I [Mycobacterium leprae] gi|219933303|emb|CAR71476.1| DNA polymerase I [Mycobacterium leprae Br4923] Length=911 Score = 1531 bits (3963), Expect = 0.0, Method: Compositional matrix adjust. Identities = 768/902 (86%), Positives = 825/902 (92%), Gaps = 6/902 (0%) Query 9 SEDRAKPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLRDEAPTHI 68 ED KP LMLLDGNSLAFRAFYALP ENFKTRGGLTTNAVYGFTAMLINLLR+EAPTHI Sbjct 10 CEDHTKPMLMLLDGNSLAFRAFYALPTENFKTRGGLTTNAVYGFTAMLINLLREEAPTHI 69 Query 69 AAAFDVSRQTFRLQRYPEYKANRSSTPDEFAGQIDITKEVLGALGITVLSEPGFEADDLI 128 AAAFDVSR+TFR + Y YKANRSS P EF GQIDITKEVLGALGITV +E GFEADDLI Sbjct 70 AAAFDVSRKTFRSECYAGYKANRSSIPAEFHGQIDITKEVLGALGITVFAEAGFEADDLI 129 Query 129 ATLATQAENEGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVVEKYGLTPR 188 ATLATQAENEGYRVLVVTGDRDALQLVS+DVTVLYPRKGVSELTRFTPEAV+EKYG+TP Sbjct 130 ATLATQAENEGYRVLVVTGDRDALQLVSNDVTVLYPRKGVSELTRFTPEAVIEKYGVTPA 189 Query 189 QYPDFAALRGDPSDNLPGIPGVGEKTAAKWIAEYGSLRSLVDNVDAVRGKVGDALRANLA 248 QYPD AALRGDPSDNLPGIPGVGEKTAAKWI +YGSL+ LVDNV++VRGKVG+ALR +LA Sbjct 190 QYPDLAALRGDPSDNLPGIPGVGEKTAAKWIVDYGSLQGLVDNVESVRGKVGEALRTHLA 249 Query 249 SVVRNRELTDLVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFDTLAAAGG- 307 SVVRNRELT+LV+DVPL QT DTLRLQPWDRD IHRLFD+LEFRVLRDRLF+ LAAAG Sbjct 250 SVVRNRELTELVKDVPLVQTSDTLRLQPWDRDRIHRLFDNLEFRVLRDRLFEALAAAGER 309 Query 308 -PEVDEGFDVRGGALAPGTVRQWLAEHAGDGRRAGLTVVGTHLPHGGDATAMAVAAADGE 366 PEVDEGFDVRGG L GTV +WLA+HA DGRR+GL +VGTHLPHGGDATA+AVAAADG Sbjct 310 VPEVDEGFDVRGGLLESGTVGRWLAKHADDGRRSGLAIVGTHLPHGGDATALAVAAADGN 369 Query 367 GAYLDTATLTPDDDAALAAWLADPAKPKALHEAKAAVHDLAGRGWTLEGVTSDTALAAYL 426 G Y+DTA LTPDDD ALAAWLADP PKALHEAK A+HDLAGRGWTL G+TSDTALAAYL Sbjct 370 GGYIDTAMLTPDDDDALAAWLADPDNPKALHEAKLAMHDLAGRGWTLGGITSDTALAAYL 429 Query 427 VRPGQRSFTLDDLSLRYLRRELRAETPQQQQLSLLDD-DDTDAETIQTTILRARAVIDLA 485 VRPGQRSFTLDDLSLRYLRRELRAETP+Q+Q SLLD+ D+ D + IQT ILRARAV+DLA Sbjct 430 VRPGQRSFTLDDLSLRYLRRELRAETPEQEQFSLLDNVDEVDKQAIQTLILRARAVVDLA 489 Query 486 DALDAELARIDSTALLGEMELPVQRVLAKMESAGIAVDLPMLTELQSQFGDQIRDAAEAA 545 ALDAEL IDST+LLGEMELPVQ+VLA ME AGIA DL +LTELQSQFGDQIRDAAEAA Sbjct 490 AALDAELDLIDSTSLLGEMELPVQQVLADMEKAGIAADLRLLTELQSQFGDQIRDAAEAA 549 Query 546 YGVIGKQINLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFDKTGHPFLQHLLA 605 Y VIGKQINL SPKQLQVVLF+ELGMPKTKRTKTGYTTDADALQSLF KT HPFLQHLL Sbjct 550 YAVIGKQINLSSPKQLQVVLFEELGMPKTKRTKTGYTTDADALQSLFCKTEHPFLQHLLT 609 Query 606 HRDVTRLKVTVDGLLQAVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAGRRIRD 665 HRDVTRLKVTVDGLL AVAADGRIHTTFNQTIA TGRLSSTEPNLQNIPIRT+AGR+IRD Sbjct 610 HRDVTRLKVTVDGLLNAVAADGRIHTTFNQTIATTGRLSSTEPNLQNIPIRTNAGRQIRD 669 Query 666 AFVVG---DGYAELMTADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFVASRAFGVPID 722 AFVVG +GY ELMTADYSQIEMRIMAHLS DEGLIEAF+TGEDLHSFVASRAFG+PI+ Sbjct 670 AFVVGSENNGYTELMTADYSQIEMRIMAHLSRDEGLIEAFHTGEDLHSFVASRAFGIPIE 729 Query 723 EVTGELRRRVKAMSYGLAYGLSAYGLSQQLKISTEEANEQMDAYFARFGGVRDYLRAVVE 782 ++T ELRRRVKAMSYGLAYGLSAYGL+ QLKISTEEA QM+ YFARFGGVRDYL VVE Sbjct 730 DITPELRRRVKAMSYGLAYGLSAYGLATQLKISTEEAKLQMEQYFARFGGVRDYLMDVVE 789 Query 783 RARKDGYTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIQVDKAL 842 +ARKDGYTSTVLGRRRYLPELDSSNRQ+REAAERAALNAPIQGSAADIIKVAMI VDK+L Sbjct 790 QARKDGYTSTVLGRRRYLPELDSSNRQIREAAERAALNAPIQGSAADIIKVAMIAVDKSL 849 Query 843 NEAQLASRMLLQVHDELLFEIAPGERERVEALVRDKMGGAYPLDVPLEVSVGYGRSWDAA 902 +A+LASRMLLQVHDELLFE+A GERE++EA+VR++MG AYPLDVPLEVSVG+GRSW AA Sbjct 850 KQAKLASRMLLQVHDELLFEVAIGEREQIEAMVREQMGSAYPLDVPLEVSVGFGRSWGAA 909 Query 903 AH 904 AH Sbjct 910 AH 911 >gi|145224148|ref|YP_001134826.1| DNA polymerase I [Mycobacterium gilvum PYR-GCK] gi|145216634|gb|ABP46038.1| DNA polymerase I [Mycobacterium gilvum PYR-GCK] Length=908 Score = 1526 bits (3950), Expect = 0.0, Method: Compositional matrix adjust. Identities = 761/901 (85%), Positives = 819/901 (91%), Gaps = 4/901 (0%) Query 5 ASAPSEDRAKPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLRDEA 64 A+ P+ D PTLMLLDGNSLAFRAFYALPAENFKT+GGLTTNAVYGFTAMLINL+RDE Sbjct 11 AATPAADDT-PTLMLLDGNSLAFRAFYALPAENFKTQGGLTTNAVYGFTAMLINLIRDEQ 69 Query 65 PTHIAAAFDVSRQTFRLQRYPEYKANRSSTPDEFAGQIDITKEVLGALGITVLSEPGFEA 124 P+HIAAAFDVSRQTFR ++YPEYK RS+TPDEF GQIDITKEVLGALGITVL+E GFEA Sbjct 70 PSHIAAAFDVSRQTFRKEKYPEYKEGRSATPDEFRGQIDITKEVLGALGITVLAEAGFEA 129 Query 125 DDLIATLATQAENEGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVVEKYG 184 DD+IATLATQAE EG+RVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAV EKYG Sbjct 130 DDIIATLATQAEGEGHRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVQEKYG 189 Query 185 LTPRQYPDFAALRGDPSDNLPGIPGVGEKTAAKWIAEYGSLRSLVDNVDAVRGKVGDALR 244 LTP QYPDFAALRGDPSDNLPGIPGVGEKTA KWIAEYGSL+ LVDNVD V+GKVGDALR Sbjct 190 LTPAQYPDFAALRGDPSDNLPGIPGVGEKTATKWIAEYGSLQGLVDNVDKVKGKVGDALR 249 Query 245 ANLASVVRNRELTDLVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFDTLAA 304 A+L+SVV NRELT+LV+DVPLAQTPDTLR+QPWDRDHIHRLFDDLEFRVLRDRLFDTLA+ Sbjct 250 AHLSSVVLNRELTELVKDVPLAQTPDTLRMQPWDRDHIHRLFDDLEFRVLRDRLFDTLAS 309 Query 305 AGGPEVDEGFDVRGGALAPGTVRQWLAEHAGDGRRAGLTVVGTHLPHGGDATAMAVAAAD 364 A PEV+EGFDV+G AL GT+ WLAE++ DGRR GL VVG HL DATA+ + A+ Sbjct 310 AD-PEVEEGFDVQGEALQAGTLAPWLAENS-DGRRFGLAVVGNHLAFDSDATALTIVASG 367 Query 365 GEGAYLDTATLTPDDDAALAAWLADPAKPKALHEAKAAVHDLAGRGWTLEGVTSDTALAA 424 GEG Y+DT L PDD+ ALA+WLADP PKALHEAK A+HDL GRGWTL GVTSDTALAA Sbjct 368 GEGRYIDTTGLDPDDEKALASWLADPHVPKALHEAKLAIHDLQGRGWTLAGVTSDTALAA 427 Query 425 YLVRPGQRSFTLDDLSLRYLRRELRAETPQQQQLSLLDDDD-TDAETIQTTILRARAVID 483 YLVRPGQRSF LDDLSLRYL+RELRA+ P+QQQLSLLDD D D + +QT +LRA AV+D Sbjct 428 YLVRPGQRSFALDDLSLRYLKRELRADNPEQQQLSLLDDSDGVDDQAVQTLLLRASAVVD 487 Query 484 LADALDAELARIDSTALLGEMELPVQRVLAKMESAGIAVDLPMLTELQSQFGDQIRDAAE 543 LADALD ELARIDS+ALLG MELPVQRVLA++E+AGIAVDL ML+ LQS+F DQIRDAAE Sbjct 488 LADALDEELARIDSSALLGNMELPVQRVLAELETAGIAVDLEMLSGLQSEFADQIRDAAE 547 Query 544 AAYGVIGKQINLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFDKTGHPFLQHL 603 AAY VIGKQINLGSPKQLQVVLFDEL MPKTKRTKTGYTTDADALQSLFDKTGHPFLQHL Sbjct 548 AAYAVIGKQINLGSPKQLQVVLFDELEMPKTKRTKTGYTTDADALQSLFDKTGHPFLQHL 607 Query 604 LAHRDVTRLKVTVDGLLQAVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAGRRI 663 LAHRD TRLKVTVDGLL AVA+DGRIHTTFNQTIAATGRLSSTEPNLQNIPIRT+AGRRI Sbjct 608 LAHRDATRLKVTVDGLLNAVASDGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTEAGRRI 667 Query 664 RDAFVVGDGYAELMTADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFVASRAFGVPIDE 723 RDAFVVGDGY ELMTADYSQIEMRIMAHLS DEGLIEAFNTGEDLHSFVASRAF VPIDE Sbjct 668 RDAFVVGDGYGELMTADYSQIEMRIMAHLSRDEGLIEAFNTGEDLHSFVASRAFSVPIDE 727 Query 724 VTGELRRRVKAMSYGLAYGLSAYGLSQQLKISTEEANEQMDAYFARFGGVRDYLRAVVER 783 VT ELRRRVKAMSYGLAYGLSAYGLSQQLKISTEEA EQM+ YFARFGGVRDYLR VV++ Sbjct 728 VTAELRRRVKAMSYGLAYGLSAYGLSQQLKISTEEAKEQMEQYFARFGGVRDYLRDVVDQ 787 Query 784 ARKDGYTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIQVDKALN 843 ARKDGYTSTV GRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMI VD+A+ Sbjct 788 ARKDGYTSTVFGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMINVDQAIK 847 Query 844 EAQLASRMLLQVHDELLFEIAPGERERVEALVRDKMGGAYPLDVPLEVSVGYGRSWDAAA 903 +A L SR LLQVHDELLFE+A GER+ ++ALVR+ MG AY LDVPLEVSVG+GRSWDAAA Sbjct 848 DAGLKSRTLLQVHDELLFEVADGERDTLDALVREHMGSAYALDVPLEVSVGFGRSWDAAA 907 Query 904 H 904 H Sbjct 908 H 908 >gi|315444483|ref|YP_004077362.1| DNA polymerase I [Mycobacterium sp. Spyr1] gi|315262786|gb|ADT99527.1| DNA polymerase I [Mycobacterium sp. Spyr1] Length=908 Score = 1525 bits (3948), Expect = 0.0, Method: Compositional matrix adjust. Identities = 760/901 (85%), Positives = 819/901 (91%), Gaps = 4/901 (0%) Query 5 ASAPSEDRAKPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLRDEA 64 A+ P+ D PTLMLLDGNSLAFRAFYALPAENFKT+GGLTTNAVYGFTAMLINL+RDE Sbjct 11 AATPAADDT-PTLMLLDGNSLAFRAFYALPAENFKTQGGLTTNAVYGFTAMLINLIRDEQ 69 Query 65 PTHIAAAFDVSRQTFRLQRYPEYKANRSSTPDEFAGQIDITKEVLGALGITVLSEPGFEA 124 P+HIAAAFDVSRQTFR ++YPEYK RS+TPDEF GQIDITKEVLGALGITVL+E GFEA Sbjct 70 PSHIAAAFDVSRQTFRKEKYPEYKEGRSATPDEFRGQIDITKEVLGALGITVLAEAGFEA 129 Query 125 DDLIATLATQAENEGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVVEKYG 184 DD+IATLATQAE EG+RVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAV EKYG Sbjct 130 DDIIATLATQAEGEGHRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVQEKYG 189 Query 185 LTPRQYPDFAALRGDPSDNLPGIPGVGEKTAAKWIAEYGSLRSLVDNVDAVRGKVGDALR 244 LTP QYPDFAALRGDPSDNLPGIPGVGEKTA KWIAEYGSL+ LVDNVD V+GKVGDALR Sbjct 190 LTPAQYPDFAALRGDPSDNLPGIPGVGEKTATKWIAEYGSLQGLVDNVDKVKGKVGDALR 249 Query 245 ANLASVVRNRELTDLVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFDTLAA 304 A+L+SVV NRELT+LV+DVPLAQTPDTLR+QPWDRDHIHRLFDDLEFRVLRDRLFDTLA+ Sbjct 250 AHLSSVVLNRELTELVKDVPLAQTPDTLRMQPWDRDHIHRLFDDLEFRVLRDRLFDTLAS 309 Query 305 AGGPEVDEGFDVRGGALAPGTVRQWLAEHAGDGRRAGLTVVGTHLPHGGDATAMAVAAAD 364 A PEV+EGFDV+G AL GT+ WLAE++ DGRR GL VVG HL DATA+ + A+ Sbjct 310 AD-PEVEEGFDVQGEALQAGTLAPWLAENS-DGRRFGLAVVGNHLAFDSDATALTIVASG 367 Query 365 GEGAYLDTATLTPDDDAALAAWLADPAKPKALHEAKAAVHDLAGRGWTLEGVTSDTALAA 424 GEG Y+DT L PDD+ ALA+WLADP PKALHEAK A+HDL GRGWTL GVTSDTALAA Sbjct 368 GEGRYIDTTGLDPDDEKALASWLADPHVPKALHEAKLAIHDLQGRGWTLAGVTSDTALAA 427 Query 425 YLVRPGQRSFTLDDLSLRYLRRELRAETPQQQQLSLLDDDD-TDAETIQTTILRARAVID 483 YLVRPGQRSF LDDLSLRYL+RELRA+ P+QQQLSLLDD D D + +QT +LRA AV+D Sbjct 428 YLVRPGQRSFALDDLSLRYLKRELRADNPEQQQLSLLDDSDGVDDQAVQTLLLRASAVVD 487 Query 484 LADALDAELARIDSTALLGEMELPVQRVLAKMESAGIAVDLPMLTELQSQFGDQIRDAAE 543 LADALD EL+RIDS+ALLG MELPVQRVLA++E+AGIAVDL ML+ LQS+F DQIRDAAE Sbjct 488 LADALDEELSRIDSSALLGNMELPVQRVLAELETAGIAVDLEMLSGLQSEFADQIRDAAE 547 Query 544 AAYGVIGKQINLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFDKTGHPFLQHL 603 AAY VIGKQINLGSPKQLQVVLFDEL MPKTKRTKTGYTTDADALQSLFDKTGHPFLQHL Sbjct 548 AAYAVIGKQINLGSPKQLQVVLFDELEMPKTKRTKTGYTTDADALQSLFDKTGHPFLQHL 607 Query 604 LAHRDVTRLKVTVDGLLQAVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAGRRI 663 LAHRD TRLKVTVDGLL AVA+DGRIHTTFNQTIAATGRLSSTEPNLQNIPIRT+AGRRI Sbjct 608 LAHRDATRLKVTVDGLLNAVASDGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTEAGRRI 667 Query 664 RDAFVVGDGYAELMTADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFVASRAFGVPIDE 723 RDAFVVGDGY ELMTADYSQIEMRIMAHLS DEGLIEAFNTGEDLHSFVASRAF VPIDE Sbjct 668 RDAFVVGDGYGELMTADYSQIEMRIMAHLSRDEGLIEAFNTGEDLHSFVASRAFSVPIDE 727 Query 724 VTGELRRRVKAMSYGLAYGLSAYGLSQQLKISTEEANEQMDAYFARFGGVRDYLRAVVER 783 VT ELRRRVKAMSYGLAYGLSAYGLSQQLKISTEEA EQM+ YFARFGGVRDYLR VV++ Sbjct 728 VTAELRRRVKAMSYGLAYGLSAYGLSQQLKISTEEAKEQMEQYFARFGGVRDYLRDVVDQ 787 Query 784 ARKDGYTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIQVDKALN 843 ARKDGYTSTV GRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMI VD+A+ Sbjct 788 ARKDGYTSTVFGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMINVDQAIK 847 Query 844 EAQLASRMLLQVHDELLFEIAPGERERVEALVRDKMGGAYPLDVPLEVSVGYGRSWDAAA 903 +A L SR LLQVHDELLFE+A GER+ ++ALVR+ MG AY LDVPLEVSVG+GRSWDAAA Sbjct 848 DAGLKSRTLLQVHDELLFEVADGERDTLDALVREHMGSAYALDVPLEVSVGFGRSWDAAA 907 Query 904 H 904 H Sbjct 908 H 908 >gi|120404335|ref|YP_954164.1| DNA polymerase I [Mycobacterium vanbaalenii PYR-1] gi|119957153|gb|ABM14158.1| DNA polymerase I [Mycobacterium vanbaalenii PYR-1] Length=909 Score = 1524 bits (3945), Expect = 0.0, Method: Compositional matrix adjust. Identities = 756/892 (85%), Positives = 816/892 (92%), Gaps = 3/892 (0%) Query 14 KPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLRDEAPTHIAAAFD 73 KPTLMLLDGNSLAFRAFYALPAENFKT+ GLTTNAVYGFTAMLINLLRDE PTHIAAAFD Sbjct 20 KPTLMLLDGNSLAFRAFYALPAENFKTKSGLTTNAVYGFTAMLINLLRDEQPTHIAAAFD 79 Query 74 VSRQTFRLQRYPEYKANRSSTPDEFAGQIDITKEVLGALGITVLSEPGFEADDLIATLAT 133 VSRQTFR +YPEYK RS+TPDEF GQIDITKEVLGALGITVL+EPGFEADD+IATLAT Sbjct 80 VSRQTFRKDKYPEYKEGRSATPDEFRGQIDITKEVLGALGITVLAEPGFEADDIIATLAT 139 Query 134 QAENEGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVVEKYGLTPRQYPDF 193 QAENEG+RVLVVTGDRD+LQLVSDDVTVLYPRKGVSELTRFTPEAV EKYGLTP QYPDF Sbjct 140 QAENEGHRVLVVTGDRDSLQLVSDDVTVLYPRKGVSELTRFTPEAVQEKYGLTPAQYPDF 199 Query 194 AALRGDPSDNLPGIPGVGEKTAAKWIAEYGSLRSLVDNVDAVRGKVGDALRANLASVVRN 253 AALRGDPSDNLPGIPGVGEKTA KWIAEYGSL+SLVDNVD V+GKVGDALRA+L+SVV N Sbjct 200 AALRGDPSDNLPGIPGVGEKTATKWIAEYGSLQSLVDNVDKVKGKVGDALRAHLSSVVLN 259 Query 254 RELTDLVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFDTLAAAGGPEVDEG 313 RELTDLV+DVPLA TPDTLR+QPWDRD IHRLFDDLEFRVLRDRLFDTLA+A PEV+EG Sbjct 260 RELTDLVKDVPLAHTPDTLRMQPWDRDQIHRLFDDLEFRVLRDRLFDTLASAD-PEVEEG 318 Query 314 FDVRGGALAPGTVRQWLAEHAGDGRRAGLTVVGTHLPHGGDATAMAVAAADGEGAYLDTA 373 F+VRG AL GT+ WLAEH+ +G+R G+ VVG HL DATA+A+ A+DG+G Y+DT Sbjct 319 FEVRGEALEAGTLAAWLAEHS-NGQRFGVAVVGNHLAFDSDATAVALVASDGDGRYIDTT 377 Query 374 TLTPDDDAALAAWLADPAKPKALHEAKAAVHDLAGRGWTLEGVTSDTALAAYLVRPGQRS 433 L P+D+ ALA+WLADP PKALHEAK A+HDL GRGWTL GVTSDTALAAYLVRPGQRS Sbjct 378 RLDPEDEKALASWLADPDAPKALHEAKLAMHDLQGRGWTLAGVTSDTALAAYLVRPGQRS 437 Query 434 FTLDDLSLRYLRRELRAETPQQQQLSLLDDDD-TDAETIQTTILRARAVIDLADALDAEL 492 F LDDLSLRYL+RELRA+ P+QQQLSLLDD D D + +QT +LRA AV+DLADALD EL Sbjct 438 FALDDLSLRYLKRELRADNPEQQQLSLLDDSDAVDDQAVQTLLLRAGAVVDLADALDEEL 497 Query 493 ARIDSTALLGEMELPVQRVLAKMESAGIAVDLPMLTELQSQFGDQIRDAAEAAYGVIGKQ 552 ARIDS+ALLG MELPVQRVLA++E+ GIAVDL ML+ELQS+F QIRDAAEAAY VIGKQ Sbjct 498 ARIDSSALLGSMELPVQRVLAQLETVGIAVDLAMLSELQSEFAGQIRDAAEAAYAVIGKQ 557 Query 553 INLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFDKTGHPFLQHLLAHRDVTRL 612 INLGSPKQLQVVLFDEL MPKTKRTKTGYTTDADALQSLFDKTGHPFLQHLLAHRD TRL Sbjct 558 INLGSPKQLQVVLFDELEMPKTKRTKTGYTTDADALQSLFDKTGHPFLQHLLAHRDATRL 617 Query 613 KVTVDGLLQAVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAGRRIRDAFVVGDG 672 KVTVDGLL +VAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRT+AGRRIRD FVVG+G Sbjct 618 KVTVDGLLNSVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTEAGRRIRDGFVVGEG 677 Query 673 YAELMTADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFVASRAFGVPIDEVTGELRRRV 732 YA+LMTADYSQIEMRIMAHLS D GLIEAFNTGEDLHSFVASRAF VP+DEVT ELRRRV Sbjct 678 YADLMTADYSQIEMRIMAHLSKDAGLIEAFNTGEDLHSFVASRAFSVPLDEVTPELRRRV 737 Query 733 KAMSYGLAYGLSAYGLSQQLKISTEEANEQMDAYFARFGGVRDYLRAVVERARKDGYTST 792 KAMSYGLAYGLSAYGLSQQLKISTEEA EQM+ YFARFGGVRDYLR VV++ARKDGYTST Sbjct 738 KAMSYGLAYGLSAYGLSQQLKISTEEAKEQMEQYFARFGGVRDYLRDVVDQARKDGYTST 797 Query 793 VLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIQVDKALNEAQLASRML 852 V GRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMI VD+A+ EA L+SRML Sbjct 798 VFGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMINVDQAIKEAGLSSRML 857 Query 853 LQVHDELLFEIAPGERERVEALVRDKMGGAYPLDVPLEVSVGYGRSWDAAAH 904 LQVHDELLFE+A GER+ ++ALVR+ MG AY LDVPLEVSVGYGRSWD+AAH Sbjct 858 LQVHDELLFEVADGERDALDALVREHMGSAYRLDVPLEVSVGYGRSWDSAAH 909 >gi|333990442|ref|YP_004523056.1| DNA polymerase I PolA [Mycobacterium sp. JDM601] gi|333486410|gb|AEF35802.1| DNA polymerase I PolA [Mycobacterium sp. JDM601] Length=912 Score = 1501 bits (3885), Expect = 0.0, Method: Compositional matrix adjust. Identities = 761/903 (85%), Positives = 822/903 (92%), Gaps = 6/903 (0%) Query 7 APSEDRAKPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLRDEAPT 66 A E + KPTL+LLDGNSLA+RAFYALPAENFKTR GLTTNAVYGFTAMLINLLRDE PT Sbjct 11 AAQETQTKPTLLLLDGNSLAYRAFYALPAENFKTRSGLTTNAVYGFTAMLINLLRDETPT 70 Query 67 HIAAAFDVSRQTFRLQRYPEYKANRSSTPDEFAGQIDITKEVLGALGITVLSEPGFEADD 126 H+AAAFDVSRQTFR +RYPEYKA RSSTPDEF GQIDITKEVL ALGIT LSEPG+EADD Sbjct 71 HVAAAFDVSRQTFRSERYPEYKATRSSTPDEFRGQIDITKEVLNALGITTLSEPGYEADD 130 Query 127 LIATLATQAENEGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVVEKYGLT 186 LIATLATQA+ EGYRVLVVTGDRDALQLV+D+VTVLYPRKGVSELTRFTP+AV+EKYGLT Sbjct 131 LIATLATQADGEGYRVLVVTGDRDALQLVNDNVTVLYPRKGVSELTRFTPDAVLEKYGLT 190 Query 187 PRQYPDFAALRGDPSDNLPGIPGVGEKTAAKWIAEYGSLRSLVDNVDAVRGKVGDALRAN 246 P QYPDFAALRGDPSDNLPGIPGVGEKTA KWIAEYGSL LVD VD V+GKVGDALRAN Sbjct 191 PAQYPDFAALRGDPSDNLPGIPGVGEKTATKWIAEYGSLEGLVDKVDTVKGKVGDALRAN 250 Query 247 LASVVRNRELTDLVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFDTLAAAG 306 L+SV+ NRELTDLVR+VPLAQTPDTLRL PWDR+ IH+LFDDLEFRVLRDRLF+TLA A Sbjct 251 LSSVILNRELTDLVRNVPLAQTPDTLRLLPWDREQIHQLFDDLEFRVLRDRLFETLATA- 309 Query 307 GPEVDEGFDVRGGALAPGTVRQWLAEHAGDGRRAGLTVVGTHLPHGGDATAMAVAAADGE 366 PEV+EGF+VRGGAL PGTV WLA+HA DGRRAGL V+GTH + DATA+A+A ADGE Sbjct 310 EPEVEEGFEVRGGALEPGTVASWLAQHAADGRRAGLAVIGTHRSYDSDATALAIATADGE 369 Query 367 GAYLDTATLTPDDDAALAAWLADPAKPKALHEAKAAVHDLAGRGWTLEGVTSDTALAAYL 426 G Y+DTATLT DD+AAL AWLADPA+PKALHEAK A+HDLAGRGWTL+GVTSDTALAAYL Sbjct 370 GGYVDTATLTADDEAALGAWLADPARPKALHEAKLAMHDLAGRGWTLDGVTSDTALAAYL 429 Query 427 VRPGQRSFTLDDLSLRYLRRELRAETPQQQQLSLLDDDD-TDAETIQTTILRARAVIDLA 485 VRPGQRSF+LDDLS+RYLRRELRAE+ +QQQLSLLDD D D + +QT ILRARAV DLA Sbjct 430 VRPGQRSFSLDDLSVRYLRRELRAESDEQQQLSLLDDTDGIDDQAVQTAILRARAVTDLA 489 Query 486 DALDAELARIDSTALLGEMELPVQRVLAKMESAGIAVDLPMLTELQSQFGDQIRDAAEAA 545 DALDAELARIDS LL ++ELP+QRVLA+MES GIAVDL L +LQS+FGDQIRDAAEAA Sbjct 490 DALDAELARIDSGGLLDDIELPLQRVLAEMESVGIAVDLDHLGQLQSRFGDQIRDAAEAA 549 Query 546 YGVIGKQINLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFDKTGHPFLQHLLA 605 Y VIGKQINLGSPKQLQVVLFDELGMPKTK+TKTGYTTDADALQSLFDKTGHPFL+HLLA Sbjct 550 YAVIGKQINLGSPKQLQVVLFDELGMPKTKKTKTGYTTDADALQSLFDKTGHPFLEHLLA 609 Query 606 HRDVTRLKVTVDGLLQAVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAGRRIRD 665 HRDVTRLKVTVDGLL+AVA+DGRIHTT NQTIAATGRLSSTEPNLQNIPIRT+ GR+IR+ Sbjct 610 HRDVTRLKVTVDGLLKAVASDGRIHTTLNQTIAATGRLSSTEPNLQNIPIRTEEGRQIRN 669 Query 666 AFVVG---DG-YAELMTADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFVASRAFGVPI 721 FVVG DG Y ELMTADYSQIEMRIMAHLS D+GLIEAFNTGEDLHSFV SRAFGVPI Sbjct 670 GFVVGSNDDGAYTELMTADYSQIEMRIMAHLSKDDGLIEAFNTGEDLHSFVGSRAFGVPI 729 Query 722 DEVTGELRRRVKAMSYGLAYGLSAYGLSQQLKISTEEANEQMDAYFARFGGVRDYLRAVV 781 EVT ++RRRVKAMSYGLAYGLS+YGLSQQLKISTEEA EQMDAYF RFGGVRDYL VV Sbjct 730 GEVTADMRRRVKAMSYGLAYGLSSYGLSQQLKISTEEAKEQMDAYFDRFGGVRDYLHDVV 789 Query 782 ERARKDGYTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIQVDKA 841 E+ARKDGYTSTVLGRRRYLPELDSSNRQVRE+AERAALNAPIQGSAADIIKVAMI VD+A Sbjct 790 EQARKDGYTSTVLGRRRYLPELDSSNRQVRESAERAALNAPIQGSAADIIKVAMIDVDQA 849 Query 842 LNEAQLASRMLLQVHDELLFEIAPGERERVEALVRDKMGGAYPLDVPLEVSVGYGRSWDA 901 L + L SRMLLQVHDELLFE+A GERE +E LVR +MGGAY L VPLEV+VGYGRSWDA Sbjct 850 LKASGLRSRMLLQVHDELLFEVAEGEREELEKLVRAQMGGAYQLSVPLEVAVGYGRSWDA 909 Query 902 AAH 904 AAH Sbjct 910 AAH 912 >gi|118469541|ref|YP_888130.1| DNA polymerase I [Mycobacterium smegmatis str. MC2 155] gi|118170828|gb|ABK71724.1| DNA polymerase I [Mycobacterium smegmatis str. MC2 155] Length=908 Score = 1490 bits (3857), Expect = 0.0, Method: Compositional matrix adjust. Identities = 750/891 (85%), Positives = 811/891 (92%), Gaps = 3/891 (0%) Query 15 PTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLRDEAPTHIAAAFDV 74 PTLMLLDGNSLAFRAFYALPAENFKT+ GLTTNAVYGFTAMLINLLRDE PTHIAAAFDV Sbjct 20 PTLMLLDGNSLAFRAFYALPAENFKTQSGLTTNAVYGFTAMLINLLRDEQPTHIAAAFDV 79 Query 75 SRQTFRLQRYPEYKANRSSTPDEFAGQIDITKEVLGALGITVLSEPGFEADDLIATLATQ 134 SRQTFR +YPEYK RS+TPDEF GQIDITKEVLGALGITVL+EPGFEADD+IATLATQ Sbjct 80 SRQTFRKDKYPEYKEGRSATPDEFRGQIDITKEVLGALGITVLAEPGFEADDIIATLATQ 139 Query 135 AENEGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVVEKYGLTPRQYPDFA 194 AE EGYRVLVVTGDRD+LQLVSD VTVLYPRKGVSELTRFTP+AVVEKYGLTP+QYPDFA Sbjct 140 AEQEGYRVLVVTGDRDSLQLVSDQVTVLYPRKGVSELTRFTPDAVVEKYGLTPQQYPDFA 199 Query 195 ALRGDPSDNLPGIPGVGEKTAAKWIAEYGSLRSLVDNVDAVRGKVGDALRANLASVVRNR 254 ALRGDPSDNLPGIPGVGEKTA KWI EYGSL++LVDNVDAV+GKVGDALRANL+SV+ NR Sbjct 200 ALRGDPSDNLPGIPGVGEKTATKWIVEYGSLQALVDNVDAVKGKVGDALRANLSSVILNR 259 Query 255 ELTDLVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFDTLAAAGGPEVDEGF 314 ELTDL+RDVPL QTPDTLR+QPW+RD IHRLFDDLEFRVLRDRLF+TL A PEV+ GF Sbjct 260 ELTDLIRDVPLPQTPDTLRMQPWNRDQIHRLFDDLEFRVLRDRLFETLVAVE-PEVEHGF 318 Query 315 DVRGGALAPGTVRQWLAEHAGDGRRAGLTVVGTHLPHGGDATAMAVAAADGEGAYLDTAT 374 DVRG AL PG + WL+EH+ G R G+ VVGTH + DATA+A+ AADG+G Y+DT+T Sbjct 319 DVRGRALEPGELAAWLSEHSL-GSRFGVAVVGTHKAYDADATALAIVAADGDGRYIDTST 377 Query 375 LTPDDDAALAAWLADPAKPKALHEAKAAVHDLAGRGWTLEGVTSDTALAAYLVRPGQRSF 434 LTP+D+AALA+WLADP PKALHEAK A+HDLAGRGWTL GVTSDTALAAYLVRPGQRSF Sbjct 378 LTPEDEAALASWLADPGPPKALHEAKLAMHDLAGRGWTLRGVTSDTALAAYLVRPGQRSF 437 Query 435 TLDDLSLRYLRRELRAETPQQQQLSLLDDDD-TDAETIQTTILRARAVIDLADALDAELA 493 TLDDL++RYL RELRAETP+QQQLSLLDD D D + +QT ILRA AV+DLADALD ELA Sbjct 438 TLDDLAVRYLHRELRAETPEQQQLSLLDDSDGVDEQAVQTVILRACAVLDLADALDQELA 497 Query 494 RIDSTALLGEMELPVQRVLAKMESAGIAVDLPMLTELQSQFGDQIRDAAEAAYGVIGKQI 553 RIDS +LL MELPVQR LA+ME AGIAVDL ML +LQS+F DQIRDAAEAAY VIGKQI Sbjct 498 RIDSLSLLSRMELPVQRTLAEMEHAGIAVDLGMLEQLQSEFADQIRDAAEAAYSVIGKQI 557 Query 554 NLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFDKTGHPFLQHLLAHRDVTRLK 613 NLGSPKQLQ VLFDEL MPKTK+TKTGYTTDADALQSLF+KTGHPFLQHLLAHRD TRLK Sbjct 558 NLGSPKQLQAVLFDELEMPKTKKTKTGYTTDADALQSLFEKTGHPFLQHLLAHRDATRLK 617 Query 614 VTVDGLLQAVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAGRRIRDAFVVGDGY 673 VTVDGLL +VA+DGRIHTTFNQTIAATGRLSSTEPNLQNIPIRT+AGRRIRDAFVVG+GY Sbjct 618 VTVDGLLNSVASDGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTEAGRRIRDAFVVGEGY 677 Query 674 AELMTADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFVASRAFGVPIDEVTGELRRRVK 733 AELMTADYSQIEMRIMAHLS D GLIEAFNTGEDLHSFVASRAF VPIDEVT ELRRRVK Sbjct 678 AELMTADYSQIEMRIMAHLSRDAGLIEAFNTGEDLHSFVASRAFSVPIDEVTPELRRRVK 737 Query 734 AMSYGLAYGLSAYGLSQQLKISTEEANEQMDAYFARFGGVRDYLRAVVERARKDGYTSTV 793 AMSYGLAYGLSAYGL+QQLKISTEEA QM+ YF RFGGVRDYLR VV++ARKDGYTSTV Sbjct 738 AMSYGLAYGLSAYGLAQQLKISTEEAKVQMEQYFDRFGGVRDYLRDVVDQARKDGYTSTV 797 Query 794 LGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIQVDKALNEAQLASRMLL 853 LGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMI VD+A+ +A L SR+LL Sbjct 798 LGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMINVDQAIKDAGLRSRILL 857 Query 854 QVHDELLFEIAPGERERVEALVRDKMGGAYPLDVPLEVSVGYGRSWDAAAH 904 QVHDELLFE++ GE+ +E LVR+ MG AYPLDVPLEVSVGYGRSWDAAAH Sbjct 858 QVHDELLFEVSEGEQGELEQLVREHMGNAYPLDVPLEVSVGYGRSWDAAAH 908 >gi|108799977|ref|YP_640174.1| DNA polymerase I [Mycobacterium sp. MCS] gi|119869089|ref|YP_939041.1| DNA polymerase I [Mycobacterium sp. KMS] gi|108770396|gb|ABG09118.1| DNA polymerase I [Mycobacterium sp. MCS] gi|119695178|gb|ABL92251.1| DNA polymerase I [Mycobacterium sp. KMS] Length=920 Score = 1484 bits (3842), Expect = 0.0, Method: Compositional matrix adjust. Identities = 746/903 (83%), Positives = 807/903 (90%), Gaps = 5/903 (0%) Query 3 TTASAPSEDRAKPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLRD 62 T S ++D KPTLMLLDGNSLA+RAFYALPAENFKT+GGLTTNAVYGFTAMLINLLRD Sbjct 22 TATSQKADD--KPTLMLLDGNSLAYRAFYALPAENFKTQGGLTTNAVYGFTAMLINLLRD 79 Query 63 EAPTHIAAAFDVSRQTFRLQRYPEYKANRSSTPDEFAGQIDITKEVLGALGITVLSEPGF 122 E P+H+AAAFDVSRQTFR+ +YPEYKA RSSTPDEF GQIDI KEVL ALGI VL+EPGF Sbjct 80 EQPSHVAAAFDVSRQTFRVDKYPEYKAGRSSTPDEFRGQIDIAKEVLVALGIAVLAEPGF 139 Query 123 EADDLIATLATQAENEGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVVEK 182 EADD+IATLATQAE EGYRVLVVTGDRDALQLVSDDVTVLYPRKGVS+LTRFTP+AV EK Sbjct 140 EADDIIATLATQAEGEGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSDLTRFTPDAVQEK 199 Query 183 YGLTPRQYPDFAALRGDPSDNLPGIPGVGEKTAAKWIAEYGSLRSLVDNVDAVRGKVGDA 242 YGLTP+QYPDFAALRGDPSDNLPGIPGVGEKTA KWIAEYGSL++LVDNVD V+GKVGDA Sbjct 200 YGLTPQQYPDFAALRGDPSDNLPGIPGVGEKTATKWIAEYGSLQALVDNVDQVKGKVGDA 259 Query 243 LRANLASVVRNRELTDLVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFDTL 302 LRANL+ VV NRELTDLV+DVPL TPDTLR+QPWDRD +HRLFDDLEFRVLRDRLF+TL Sbjct 260 LRANLSHVVLNRELTDLVKDVPLPHTPDTLRVQPWDRDQLHRLFDDLEFRVLRDRLFETL 319 Query 303 AAAGGPEVDEGFDVRGGALAPGTVRQWLAEHAGDGRRAGLTVVGTHLPHGGDATAMAVAA 362 AA PEV+ GFDVRG AL G + WL+EH+ G R GL VVGTHL + DATA+A+ A Sbjct 320 AAVE-PEVEHGFDVRGKALERGELAAWLSEHSL-GNRFGLAVVGTHLAYDADATALAIVA 377 Query 363 ADGEGAYLDTATLTPDDDAALAAWLADPAKPKALHEAKAAVHDLAGRGWTLEGVTSDTAL 422 ADG+G Y+DT +L PDD+AALA+WLADP PKALHEAK A+HDLAGRGW L GVTSDTAL Sbjct 378 ADGDGRYIDTTSLDPDDEAALASWLADPGPPKALHEAKLAMHDLAGRGWKLAGVTSDTAL 437 Query 423 AAYLVRPGQRSFTLDDLSLRYLRRELRAETP-QQQQLSLLDDDDTDAETIQTTILRARAV 481 AAYLVRPGQRSF+LDDLSLRYLRRELRA+ P QQQ L D D D + +QT ILRA AV Sbjct 438 AAYLVRPGQRSFSLDDLSLRYLRRELRADNPAQQQLSLLDDSDGGDDQAVQTLILRAVAV 497 Query 482 IDLADALDAELARIDSTALLGEMELPVQRVLAKMESAGIAVDLPMLTELQSQFGDQIRDA 541 +DLADALD ELARIDS++LLG MELPVQRVLA+ME GIAVD+ L +LQS+F D IRDA Sbjct 498 LDLADALDEELARIDSSSLLGRMELPVQRVLAEMEHTGIAVDIDQLRQLQSEFADLIRDA 557 Query 542 AEAAYGVIGKQINLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFDKTGHPFLQ 601 AEAAY VIGKQINLGSPKQLQ VLFDEL MPKTKRTKTGYTTDADALQSLFDKTGHPFLQ Sbjct 558 AEAAYAVIGKQINLGSPKQLQAVLFDELEMPKTKRTKTGYTTDADALQSLFDKTGHPFLQ 617 Query 602 HLLAHRDVTRLKVTVDGLLQAVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAGR 661 HLLAHRD TRLKVTVDGLL +VA+DGRIHTTFNQTIAATGRLSSTEPNLQNIPIRT+AGR Sbjct 618 HLLAHRDATRLKVTVDGLLNSVASDGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTEAGR 677 Query 662 RIRDAFVVGDGYAELMTADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFVASRAFGVPI 721 RIRDAFVVGDGY E+MTADYSQIEMRIMAHLS D GLIEAFNTGEDLHSFVASRAF VPI Sbjct 678 RIRDAFVVGDGYTEVMTADYSQIEMRIMAHLSQDAGLIEAFNTGEDLHSFVASRAFDVPI 737 Query 722 DEVTGELRRRVKAMSYGLAYGLSAYGLSQQLKISTEEANEQMDAYFARFGGVRDYLRAVV 781 DEVT +LRRRVKAMSYGLAYGLSAYGL+ QLKISTEEA QMD YFARFGG+RDYLR VV Sbjct 738 DEVTPDLRRRVKAMSYGLAYGLSAYGLAAQLKISTEEAKVQMDQYFARFGGIRDYLRDVV 797 Query 782 ERARKDGYTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIQVDKA 841 ++ARKDGYTSTV GRRRYLPELDSSNR VREAAERAALNAPIQGSAADIIKVAMI VD+A Sbjct 798 DQARKDGYTSTVFGRRRYLPELDSSNRNVREAAERAALNAPIQGSAADIIKVAMIDVDQA 857 Query 842 LNEAQLASRMLLQVHDELLFEIAPGERERVEALVRDKMGGAYPLDVPLEVSVGYGRSWDA 901 + +A L+SRMLLQVHDELLFE+A GER+ +E LVRDKMG AY LDVPLEVSVGYGRSWDA Sbjct 858 IKDAGLSSRMLLQVHDELLFEVADGERDTLEKLVRDKMGSAYALDVPLEVSVGYGRSWDA 917 Query 902 AAH 904 AAH Sbjct 918 AAH 920 >gi|126435605|ref|YP_001071296.1| DNA polymerase I [Mycobacterium sp. JLS] gi|126235405|gb|ABN98805.1| DNA polymerase I [Mycobacterium sp. JLS] Length=929 Score = 1470 bits (3806), Expect = 0.0, Method: Compositional matrix adjust. Identities = 746/912 (82%), Positives = 806/912 (89%), Gaps = 14/912 (1%) Query 3 TTASAPSEDRAKPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLRD 62 T S ++D KPTLMLLDGNSLA+RAFYALPAENFKT+GGLTTNAVYGFTAMLINLLRD Sbjct 22 TATSQKADD--KPTLMLLDGNSLAYRAFYALPAENFKTQGGLTTNAVYGFTAMLINLLRD 79 Query 63 EAPTHIAAAFDVSRQTFRLQRYPEYKANRSSTPDEFAGQIDITKEVLGALGITVLSEPGF 122 E P+H+AAAFDVSRQTFR+ +YPEYKA RSSTPDEF GQIDI KEVL ALGI VL+EPGF Sbjct 80 EQPSHVAAAFDVSRQTFRVDKYPEYKAGRSSTPDEFRGQIDIAKEVLVALGIAVLAEPGF 139 Query 123 EADDLIATLATQAENEGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVVEK 182 EADD+IATLATQAE EGYRVLVVTGDRDALQLVSDDVTVLYPRKGVS+LTRFTP+AV EK Sbjct 140 EADDIIATLATQAEGEGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSDLTRFTPDAVQEK 199 Query 183 YGLTPRQYPDFAALRGDPSDNLPGIPGVGEKTAAKWIAEYGSLRSLVDNVDAVRGKVGDA 242 YGLTP+QYPDFAALRGDPSDNLPGIPGVGEKTA KWIAEYGSL++LVDNVD V+GKVGDA Sbjct 200 YGLTPQQYPDFAALRGDPSDNLPGIPGVGEKTATKWIAEYGSLQALVDNVDQVKGKVGDA 259 Query 243 LRANLASVVRNRELTDLVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFDTL 302 LRANL+ VV NRELTDLV+DVPL TPDTLR+QPWDRD IHRLFDDLEFRVLRDRLF+TL Sbjct 260 LRANLSHVVLNRELTDLVKDVPLPHTPDTLRVQPWDRDQIHRLFDDLEFRVLRDRLFETL 319 Query 303 AAAGGPEVDEGFDVRGGALAPGTVRQWLAEHAGDGRRAGLTVVGTHLPHGGDATAMAVAA 362 AA PEV+ GFDVRG AL G + WL+EH+ G R GL VVGTHL + DATA+A+ A Sbjct 320 AAV-EPEVEHGFDVRGKALERGELAAWLSEHSL-GNRFGLAVVGTHLAYDADATALAIVA 377 Query 363 ADGEGAYLDTATLTPDDDAALAAWLADPAKPKALHEAKAAVHDLAGRGWTLEGVTSDTAL 422 ADG+G Y+DT +L PDD+AALA+WLADP PKALHEAK A+HDLAGRGW L GVTSDTAL Sbjct 378 ADGDGRYIDTTSLDPDDEAALASWLADPGPPKALHEAKLAMHDLAGRGWKLAGVTSDTAL 437 Query 423 AAYLVRPGQRSFTLDDLSLRYLRRELRAETP-QQQQLSLLDDDDTDAETIQTTILRARAV 481 AAYLVRPGQRSF+LDDLSLRYLRRELRA+ P QQQ L D D D + +QT ILRA AV Sbjct 438 AAYLVRPGQRSFSLDDLSLRYLRRELRADNPAQQQLSLLDDSDGGDDQAVQTLILRAVAV 497 Query 482 IDLADALDAELARIDSTALLGEMELPVQRVLAKMESAGIAVDLPMLTELQSQFGDQIRDA 541 +DLADALD ELARIDS++LLG MELPVQRVLA+ME GIAVD+ L +LQS+F D IRDA Sbjct 498 LDLADALDEELARIDSSSLLGRMELPVQRVLAEMEHTGIAVDIDQLRQLQSEFADLIRDA 557 Query 542 AEAAYGVIGKQINLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFDKTGHPFLQ 601 AEAAY VIGKQINLGSPKQLQ VLFDEL MPKTKRTKTGYTTDADALQSLFDKTGHPFLQ Sbjct 558 AEAAYAVIGKQINLGSPKQLQAVLFDELAMPKTKRTKTGYTTDADALQSLFDKTGHPFLQ 617 Query 602 HLLAHRDVTRLKVTVDGLLQAVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAGR 661 HLLAHRD TRLKVTVDGLL +VA+DGRIHTTFNQTIAATGRLSSTEPNLQNIPIRT+AGR Sbjct 618 HLLAHRDATRLKVTVDGLLNSVASDGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTEAGR 677 Query 662 RIRDAFVV-----GDG----YAELMTADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFV 712 RIRDAFVV G G + ELMTADYSQIEMRIMAHLS D GLIEAFNTGEDLHSFV Sbjct 678 RIRDAFVVESRPPGSGGGAVFTELMTADYSQIEMRIMAHLSQDAGLIEAFNTGEDLHSFV 737 Query 713 ASRAFGVPIDEVTGELRRRVKAMSYGLAYGLSAYGLSQQLKISTEEANEQMDAYFARFGG 772 ASRAF VPIDEVT +LRRRVKAMSYGLAYGLSAYGL+ QLKISTEEA QMD YFARFGG Sbjct 738 ASRAFDVPIDEVTPDLRRRVKAMSYGLAYGLSAYGLAAQLKISTEEAKVQMDQYFARFGG 797 Query 773 VRDYLRAVVERARKDGYTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIK 832 +RDYLR VV++ARKDGYTSTV GRRRYLPELDSSNR VREAAERAALNAPIQGSAADIIK Sbjct 798 IRDYLRDVVDQARKDGYTSTVFGRRRYLPELDSSNRNVREAAERAALNAPIQGSAADIIK 857 Query 833 VAMIQVDKALNEAQLASRMLLQVHDELLFEIAPGERERVEALVRDKMGGAYPLDVPLEVS 892 VAMI VD+A+ +A L+SRMLLQVHDELLFE+A GER+ +E LVRDKMG AY LDVPLEVS Sbjct 858 VAMIDVDQAIKDAGLSSRMLLQVHDELLFEVADGERDTLEKLVRDKMGSAYALDVPLEVS 917 Query 893 VGYGRSWDAAAH 904 VGYGRSWDAAAH Sbjct 918 VGYGRSWDAAAH 929 >gi|169629701|ref|YP_001703350.1| DNA polymerase I [Mycobacterium abscessus ATCC 19977] gi|169241668|emb|CAM62696.1| DNA polymerase (POL I) [Mycobacterium abscessus] Length=902 Score = 1444 bits (3739), Expect = 0.0, Method: Compositional matrix adjust. Identities = 733/902 (82%), Positives = 796/902 (89%), Gaps = 2/902 (0%) Query 4 TASAPSEDRAKPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLRDE 63 TA A +PTL+LLDGNSLAFRAFYALPAENFKT+ GLTTNAVYGFT+MLINLLRDE Sbjct 2 TAPATKTGTKQPTLLLLDGNSLAFRAFYALPAENFKTQSGLTTNAVYGFTSMLINLLRDE 61 Query 64 APTHIAAAFDVSRQTFRLQRYPEYKANRSSTPDEFAGQIDITKEVLGALGITVLSEPGFE 123 APTH+AAAFDVSR+TFR RYPEYKA RS+TPDEF GQIDITKEVL ALGITVL+E GFE Sbjct 62 APTHVAAAFDVSRKTFRSDRYPEYKATRSATPDEFRGQIDITKEVLQALGITVLAEEGFE 121 Query 124 ADDLIATLATQAENEGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVVEKY 183 ADD+IATLATQ + EG++V VVTGDRD+LQLV++DVTVLYPRKGVS+LTRFTPEAVVEKY Sbjct 122 ADDIIATLATQGQAEGFKVFVVTGDRDSLQLVNEDVTVLYPRKGVSDLTRFTPEAVVEKY 181 Query 184 GLTPRQYPDFAALRGDPSDNLPGIPGVGEKTAAKWIAEYGSLRSLVDNVDAVRGKVGDAL 243 GLTP QYPDFAALRGDPSDNLPGIPGVGEKTA+KWI EYGSL+ LVD D VRGKVGD+L Sbjct 182 GLTPSQYPDFAALRGDPSDNLPGIPGVGEKTASKWILEYGSLQELVDKADTVRGKVGDSL 241 Query 244 RANLASVVRNRELTDLVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFDTLA 303 RANLASV+ NRELTDLVR VPL P L L PWDRD IHRLFDDLEFRVLRDRLF+TL Sbjct 242 RANLASVILNRELTDLVRTVPLPYVPAQLALAPWDRDQIHRLFDDLEFRVLRDRLFETLE 301 Query 304 AAGGPEVDEGFDVRGGALAPGTVRQWLAEHAGDGRRAGLTVVGTHLPHGGDATAMAVAAA 363 A PEVDEGF + G AL PGTV WLAEH GDGRR+GL VVGT+ P+ GDATA+A+A+A Sbjct 302 AVE-PEVDEGFQLAGQALEPGTVAAWLAEHTGDGRRSGLAVVGTYTPYDGDATAVAIASA 360 Query 364 DGEGAYLDTATLTPDDDAALAAWLADPAKPKALHEAKAAVHDLAGRGWTLEGVTSDTALA 423 DG+GAY+DT T+TPDD+AALA WLAD A+PKALHEAK A+H LAGRGW L GVTSDTALA Sbjct 361 DGDGAYIDTTTVTPDDEAALAEWLADAARPKALHEAKQAIHALAGRGWELGGVTSDTALA 420 Query 424 AYLVRPGQRSFTLDDLSLRYLRRELRAETPQQQQLSLLDDDDT-DAETIQTTILRARAVI 482 AYLVRPGQRSF LDDLSLRYLRRELRAE +QQLSLLD+D DA+ Q +LRARAVI Sbjct 421 AYLVRPGQRSFALDDLSLRYLRRELRAEDDGEQQLSLLDEDGAGDAKAAQAQMLRARAVI 480 Query 483 DLADALDAELARIDSTALLGEMELPVQRVLAKMESAGIAVDLPMLTELQSQFGDQIRDAA 542 DLADALD EL RI+S LL +MELPVQRVLA +ES GIAVD L+ LQ+QF IR+AA Sbjct 481 DLADALDVELERIESAGLLTDMELPVQRVLAGLESVGIAVDTDHLSSLQNQFASGIREAA 540 Query 543 EAAYGVIGKQINLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFDKTGHPFLQH 602 +AAY VIGKQINLGSPKQLQVVLFDELGMPKTK+TKTGYTTDADALQ+LFDKTGHPFL+H Sbjct 541 DAAYAVIGKQINLGSPKQLQVVLFDELGMPKTKKTKTGYTTDADALQTLFDKTGHPFLEH 600 Query 603 LLAHRDVTRLKVTVDGLLQAVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAGRR 662 LL HRDVTRLKVTVDGLL++VAADGRIHTTFNQTIAATGRLSSTEPNLQNIP+RT+AGR Sbjct 601 LLTHRDVTRLKVTVDGLLKSVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPVRTEAGRE 660 Query 663 IRDAFVVGDGYAELMTADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFVASRAFGVPID 722 IRD FVVG GY ELMT DYSQIEMRIMAHLS DEGLIEAFNTGEDLHSFVA+RAFGVPID Sbjct 661 IRDGFVVGAGYRELMTVDYSQIEMRIMAHLSADEGLIEAFNTGEDLHSFVAARAFGVPID 720 Query 723 EVTGELRRRVKAMSYGLAYGLSAYGLSQQLKISTEEANEQMDAYFARFGGVRDYLRAVVE 782 EVT ELRRRVKAMSYGLAYGLSAYGL+ QLKIS +EA EQMD YF+RFGGVRDYLRAVV+ Sbjct 721 EVTAELRRRVKAMSYGLAYGLSAYGLATQLKISNDEAKEQMDQYFSRFGGVRDYLRAVVD 780 Query 783 RARKDGYTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIQVDKAL 842 +ARKDGYTSTVLGRRRYLP+LDS +R REAAERAALNAPIQGSAADIIKVAMI DKAL Sbjct 781 QARKDGYTSTVLGRRRYLPDLDSGDRLRREAAERAALNAPIQGSAADIIKVAMITTDKAL 840 Query 843 NEAQLASRMLLQVHDELLFEIAPGERERVEALVRDKMGGAYPLDVPLEVSVGYGRSWDAA 902 + L SRMLLQVHDELLFE+A GERE +EALVR MG AYPLDVPLEVSVGYGRSWDAA Sbjct 841 RDKGLRSRMLLQVHDELLFEVAEGERESLEALVRKTMGSAYPLDVPLEVSVGYGRSWDAA 900 Query 903 AH 904 AH Sbjct 901 AH 902 >gi|54023843|ref|YP_118085.1| DNA polymerase I [Nocardia farcinica IFM 10152] gi|54015351|dbj|BAD56721.1| putative DNA polymerase I [Nocardia farcinica IFM 10152] Length=910 Score = 1370 bits (3547), Expect = 0.0, Method: Compositional matrix adjust. Identities = 687/907 (76%), Positives = 772/907 (86%), Gaps = 6/907 (0%) Query 3 TTAS----APSEDRAKPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLIN 58 TTAS AP + +PTL+LLDG+SLA+RAF+ALPAENFKT G TTNAVYGFTAMLIN Sbjct 5 TTASRSTPAPGAEGGRPTLLLLDGHSLAYRAFFALPAENFKTVTGQTTNAVYGFTAMLIN 64 Query 59 LLRDEAPTHIAAAFDVSRQTFRLQRYPEYKANRSSTPDEFAGQIDITKEVLGALGITVLS 118 LLRDE PTHIAAAFDVSR+TFR + YPEYKANRS TPDEF GQ+++TK+VLGALGI V++ Sbjct 65 LLRDEKPTHIAAAFDVSRKTFRTEAYPEYKANRSQTPDEFRGQVELTKDVLGALGIPVMA 124 Query 119 EPGFEADDLIATLATQAENEGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEA 178 GFEADD+IATL TQA+ EG+R+L+VTGDRD++QLV DDVTVLYPRKGVS+LTRFTPE Sbjct 125 IDGFEADDVIATLTTQAKAEGFRILIVTGDRDSIQLVDDDVTVLYPRKGVSDLTRFTPEE 184 Query 179 VVEKYGLTPRQYPDFAALRGDPSDNLPGIPGVGEKTAAKWIAEYGSLRSLVDNVDAVRGK 238 V+ KYGLTP QYPD+AALRGDPSDNLPGIPGVGEKTAAKWI EYG L +LVD VD V+GK Sbjct 185 VMTKYGLTPNQYPDYAALRGDPSDNLPGIPGVGEKTAAKWIREYGDLATLVDKVDTVKGK 244 Query 239 VGDALRANLASVVRNRELTDLVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRL 298 VGDALRA+L+SVV NR+LT++V+DVPL TPD L PWDR+ IHRLFDDLEFRVLRDRL Sbjct 245 VGDALRAHLSSVVLNRQLTEMVKDVPLPYTPDQLAQGPWDREKIHRLFDDLEFRVLRDRL 304 Query 299 FDTLAAAGGPEVDEGFDVRGGALAPGTVRQWLAEHAGDGRRAGLTVVGTHLPHGGDATAM 358 F+TLA E + GF++ GGALA G V WLAEHA G R G++VVG+ P GD A+ Sbjct 305 FETLAPPQ-QEAESGFEISGGALAVGAVADWLAEHAKAGVRHGVSVVGSGAPARGDVQAL 363 Query 359 AVAAADGEGAYLDTATLTPDDDAALAAWLADPAKPKALHEAKAAVHDLAGRGWTLEGVTS 418 A+AAADGE Y+D LTP+D+AALAAWLADPA PKALHEAK+A+H L GRGWTL G+TS Sbjct 364 AIAAADGESGYIDVTVLTPEDEAALAAWLADPAVPKALHEAKSAMHALRGRGWTLGGLTS 423 Query 419 DTALAAYLVRPGQRSFTLDDLSLRYLRRELRAETPQQQQLSLLDDDD-TDAETIQTTILR 477 DTALAAYLVRPGQRSF LDDLSLRYL RELRAET QLSLLDD+D DAET + +LR Sbjct 424 DTALAAYLVRPGQRSFNLDDLSLRYLHRELRAETDDNAQLSLLDDEDAVDAETARAEMLR 483 Query 478 ARAVIDLADALDAELARIDSTALLGEMELPVQRVLAKMESAGIAVDLPMLTELQSQFGDQ 537 ARAV+DLA ALDAEL +I+STALL +MELP+ VLA +E AGIAVD L LQ QF D+ Sbjct 484 ARAVLDLAAALDAELEQIESTALLTDMELPLLGVLATLEEAGIAVDCEQLEALQRQFADK 543 Query 538 IRDAAEAAYGVIGKQINLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFDKTGH 597 + AAEAAYGVIGKQINLGSPKQLQVVLFDEL MPKTKRTKTGYTTDADAL+SLF+KT H Sbjct 544 VAQAAEAAYGVIGKQINLGSPKQLQVVLFDELDMPKTKRTKTGYTTDADALESLFEKTQH 603 Query 598 PFLQHLLAHRDVTRLKVTVDGLLQAVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRT 657 PFL+HLLAHRD TRLKVTVDGLL++VA DGRIHTTFNQTIAATGRLSSTEPNLQNIPIRT Sbjct 604 PFLEHLLAHRDATRLKVTVDGLLKSVADDGRIHTTFNQTIAATGRLSSTEPNLQNIPIRT 663 Query 658 DAGRRIRDAFVVGDGYAELMTADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFVASRAF 717 D GR IRD FVVG GYAELMTADYSQIEMRIMAHLSGDEGLIEAFN+GEDLHSFVAS+AF Sbjct 664 DTGRMIRDTFVVGPGYAELMTADYSQIEMRIMAHLSGDEGLIEAFNSGEDLHSFVASKAF 723 Query 718 GVPIDEVTGELRRRVKAMSYGLAYGLSAYGLSQQLKISTEEANEQMDAYFARFGGVRDYL 777 +PI EV+ ELRRR+KAMSYGLAYGLS+YGLS QLKIST EA EQMD YF+RFG +RDYL Sbjct 724 DIPIAEVSPELRRRIKAMSYGLAYGLSSYGLSAQLKISTAEAKEQMDIYFSRFGRIRDYL 783 Query 778 RAVVERARKDGYTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIQ 837 VVE+ARK GYT T+ GRRRYLP+LDSSNRQ REAAER ALNAPIQG+AADIIKVAMI Sbjct 784 YEVVEQARKVGYTETLFGRRRYLPDLDSSNRQRREAAERMALNAPIQGTAADIIKVAMID 843 Query 838 VDKALNEAQLASRMLLQVHDELLFEIAPGERERVEALVRDKMGGAYPLDVPLEVSVGYGR 897 V + + EA L SRMLLQ+HDEL+FE+A GER+ +E L R+KM A L VPL+VSVG GR Sbjct 844 VHRGIREAGLRSRMLLQIHDELVFEVAEGERDALEQLAREKMSAAIALSVPLDVSVGTGR 903 Query 898 SWDAAAH 904 SWDAAAH Sbjct 904 SWDAAAH 910 >gi|12001920|gb|AAG43103.1|AF038543_1 DNA polymerase I [Rhodococcus sp. ATCC 15963] Length=915 Score = 1341 bits (3471), Expect = 0.0, Method: Compositional matrix adjust. Identities = 666/892 (75%), Positives = 754/892 (85%), Gaps = 2/892 (0%) Query 14 KPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLRDEAPTHIAAAFD 73 +P LMLLDG+SLAFRAFYALPAENFKT G TNAVYGFT+MLINLLRDE PTH+AAAFD Sbjct 25 RPLLMLLDGHSLAFRAFYALPAENFKTHSGQATNAVYGFTSMLINLLRDEQPTHLAAAFD 84 Query 74 VSRQTFRLQRYPEYKANRSSTPDEFAGQIDITKEVLGALGITVLSEPGFEADDLIATLAT 133 VSRQTFR +PEYKA R+ PDEF GQIDITK+VLGALGI V++E GFEADD+IATL T Sbjct 85 VSRQTFRADLFPEYKAQRAKAPDEFKGQIDITKDVLGALGIPVMAEEGFEADDVIATLTT 144 Query 134 QAENEGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVVEKYGLTPRQYPDF 193 QAE GYRVLVVTGDRD+LQLV+D+VTVLYP+KG SELTRFTP AV EKY L+P QYPDF Sbjct 145 QAEALGYRVLVVTGDRDSLQLVTDNVTVLYPKKGASELTRFTPTAVEEKYSLSPAQYPDF 204 Query 194 AALRGDPSDNLPGIPGVGEKTAAKWIAEYGSLRSLVDNVDAVRGKVGDALRANLASVVRN 253 AALRGDPSDNLPGIPGVGEKTA KWI EYG L+ LVDNVD VRGKVGD+LR NLA+V+ N Sbjct 205 AALRGDPSDNLPGIPGVGEKTATKWIREYGDLQGLVDNVDKVRGKVGDSLRENLANVLLN 264 Query 254 RELTDLVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFDTLAAAGGPEVDEG 313 R+LT++VRDVPL TP+ L L PWDR+ IH LFDDLEF+VLRDRLF TL+++ PE +EG Sbjct 265 RQLTEMVRDVPLPYTPEQLVLAPWDREKIHALFDDLEFKVLRDRLFATLSSSE-PEAEEG 323 Query 314 FDVRGGALAPGTVRQWLAEHAGDGRRAGLTVVGTHLPHGGDATAMAVAAADGEGAYLDTA 373 F+V ALAPG V WL HA G R G+TV+GT P GD TA+A+AA+DGE AY+ + Sbjct 324 FEVSDDALAPGAVAAWLDAHARTGERHGVTVLGTRTPFAGDVTALAIAASDGECAYIAAS 383 Query 374 TLTPDDDAALAAWLADPAKPKALHEAKAAVHDLAGRGWTLEGVTSDTALAAYLVRPGQRS 433 T TP+D+AAL WLAD ++PKALHEAK A+H L GRGWTL G+TSDTALAAYLVRPGQRS Sbjct 384 TATPEDEAALGDWLADASQPKALHEAKWAIHALRGRGWTLGGLTSDTALAAYLVRPGQRS 443 Query 434 FTLDDLSLRYLRRELRAETPQQQQLSLLDD-DDTDAETIQTTILRARAVIDLADALDAEL 492 F LDDLSLRYL+RELRAET Q+QLSLLDD + DAE +T +L A+AV+DLA AL EL Sbjct 444 FNLDDLSLRYLKRELRAETSGQEQLSLLDDTEQLDAEAAETAMLSAQAVLDLAAALGTEL 503 Query 493 ARIDSTALLGEMELPVQRVLAKMESAGIAVDLPMLTELQSQFGDQIRDAAEAAYGVIGKQ 552 I+S +LL +MELP+ LA++E+ GI VD L +LQS+F Q+ DAA +AY VI KQ Sbjct 504 ESIESKSLLSDMELPLTIELAQIEATGIVVDSAHLHDLQSRFASQVADAANSAYEVIDKQ 563 Query 553 INLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFDKTGHPFLQHLLAHRDVTRL 612 INLGSPKQLQVVLF+EL MPKTK+TKTGY+TDA+ALQ LFDKTGHPFL+HLLAHRD TR+ Sbjct 564 INLGSPKQLQVVLFEELDMPKTKKTKTGYSTDAEALQGLFDKTGHPFLEHLLAHRDATRM 623 Query 613 KVTVDGLLQAVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAGRRIRDAFVVGDG 672 KVTVDGLL+AVA DGRIHTTFNQT+AATGRLSST+PNLQNIP+R DAGR IRD FVVG G Sbjct 624 KVTVDGLLKAVAEDGRIHTTFNQTVAATGRLSSTDPNLQNIPVRNDAGREIRDGFVVGQG 683 Query 673 YAELMTADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFVASRAFGVPIDEVTGELRRRV 732 + L+TADYSQIEMRIMAH+SGDEGLIEAFNTGEDLHSFV SRAFGVPI+EVT ELRRRV Sbjct 684 FDVLLTADYSQIEMRIMAHVSGDEGLIEAFNTGEDLHSFVGSRAFGVPIEEVTPELRRRV 743 Query 733 KAMSYGLAYGLSAYGLSQQLKISTEEANEQMDAYFARFGGVRDYLRAVVERARKDGYTST 792 KAMSYGLAYGLSAYGL+ QLKISTEEA +QMDAYFARFGGVRDYL AVVE+ARKDGYTST Sbjct 744 KAMSYGLAYGLSAYGLASQLKISTEEAKQQMDAYFARFGGVRDYLHAVVEQARKDGYTST 803 Query 793 VLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIQVDKALNEAQLASRML 852 + GRRRYLP+L+S NRQ RE AERAALNAPIQG+AADIIKVAMI V KAL +A L SRML Sbjct 804 LYGRRRYLPDLNSDNRQRREVAERAALNAPIQGTAADIIKVAMINVQKALADAGLKSRML 863 Query 853 LQVHDELLFEIAPGERERVEALVRDKMGGAYPLDVPLEVSVGYGRSWDAAAH 904 LQVHDEL+ E+ E E V ALV+DKM A L VPL+VSVG GRSWD+AAH Sbjct 864 LQVHDELVLEVVASELEEVTALVKDKMATAIELSVPLDVSVGTGRSWDSAAH 915 >gi|226360133|ref|YP_002777911.1| DNA polymerase I [Rhodococcus opacus B4] gi|226238618|dbj|BAH48966.1| DNA polymerase I [Rhodococcus opacus B4] Length=914 Score = 1340 bits (3469), Expect = 0.0, Method: Compositional matrix adjust. Identities = 689/901 (77%), Positives = 769/901 (86%), Gaps = 4/901 (0%) Query 5 ASAPSEDRAKPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLRDEA 64 A+APS+DR PTLMLLDG+SLAFRAFYALPAENFKT G TNAVYGFT+MLINLLRDE Sbjct 17 AAAPSDDR--PTLMLLDGHSLAFRAFYALPAENFKTHSGQVTNAVYGFTSMLINLLRDEQ 74 Query 65 PTHIAAAFDVSRQTFRLQRYPEYKANRSSTPDEFAGQIDITKEVLGALGITVLSEPGFEA 124 PTH+AAAFDVSRQTFR +++PEYKANRS PDEF GQ++ITK+VLGALGI V++E GFEA Sbjct 75 PTHVAAAFDVSRQTFRAEKFPEYKANRSKAPDEFKGQVEITKDVLGALGIPVMAEEGFEA 134 Query 125 DDLIATLATQAENEGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVVEKYG 184 DD+IATL TQAE GYRVLVVTGDRD+LQLV+D VTVLYP+KGVS+LTRFTP AV EKYG Sbjct 135 DDIIATLTTQAEALGYRVLVVTGDRDSLQLVTDGVTVLYPKKGVSDLTRFTPAAVEEKYG 194 Query 185 LTPRQYPDFAALRGDPSDNLPGIPGVGEKTAAKWIAEYGSLRSLVDNVDAVRGKVGDALR 244 LTP QYPDFAALRGDPSDNLPGIPGVGEKTA KWI EYG L LVDNVD VRGKVGDALR Sbjct 195 LTPAQYPDFAALRGDPSDNLPGIPGVGEKTATKWIKEYGDLVGLVDNVDKVRGKVGDALR 254 Query 245 ANLASVVRNRELTDLVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFDTLAA 304 NL +V+ NRELT++VRDVPL TPD L L WDR+ IH LFDDLEF+VLRDRLF TLA Sbjct 255 ENLPNVLLNRELTEMVRDVPLPYTPDQLMLAQWDREKIHALFDDLEFKVLRDRLFATLAP 314 Query 305 AGGPEVDEGFDVRGGALAPGTVRQWLAEHAGDGRRAGLTVVGTHLPHGGDATAMAVAAAD 364 E +EGF+VRG AL PG V WL+ HA G R+G++VVGT P+GGD TA+AVAAAD Sbjct 315 VEA-EAEEGFEVRGSALEPGAVADWLSLHASTGERSGVSVVGTRTPYGGDVTAIAVAAAD 373 Query 365 GEGAYLDTATLTPDDDAALAAWLADPAKPKALHEAKAAVHDLAGRGWTLEGVTSDTALAA 424 GEGAY+ TA+ TP+D+ AL WLAD +PKALHEAK A+H L GRGW L G+TSDTALAA Sbjct 374 GEGAYIATASATPEDEKALGDWLADAEQPKALHEAKWAMHALRGRGWVLGGLTSDTALAA 433 Query 425 YLVRPGQRSFTLDDLSLRYLRRELRAETPQQQQLSLLDD-DDTDAETIQTTILRARAVID 483 YLVRPGQR+F LDDLSLRYLRRELR E Q+QLSLLDD D DAE +T IL ARAV+D Sbjct 434 YLVRPGQRTFNLDDLSLRYLRRELRVEETGQEQLSLLDDADQVDAEAAETEILSARAVLD 493 Query 484 LADALDAELARIDSTALLGEMELPVQRVLAKMESAGIAVDLPMLTELQSQFGDQIRDAAE 543 LA ALD EL I+STALL EMELP+ VLA +E++GIAVD L +LQS+F ++ +AAE Sbjct 494 LAAALDTELDNIESTALLSEMELPLLEVLAVIEASGIAVDGTHLHDLQSRFAAEVSEAAE 553 Query 544 AAYGVIGKQINLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFDKTGHPFLQHL 603 AAYGVIGKQINLGSPKQLQVVLFDEL MPKTK+TKTGYTTDA+ALQ+LF+KT HPFL+HL Sbjct 554 AAYGVIGKQINLGSPKQLQVVLFDELEMPKTKKTKTGYTTDAEALQNLFEKTSHPFLEHL 613 Query 604 LAHRDVTRLKVTVDGLLQAVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAGRRI 663 LAHRD TRLKVTVDGLL+ VA DGRIHTTFNQT+AATGRLSSTEPNLQNIP+RTDAGR+I Sbjct 614 LAHRDATRLKVTVDGLLKTVAEDGRIHTTFNQTVAATGRLSSTEPNLQNIPVRTDAGRQI 673 Query 664 RDAFVVGDGYAELMTADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFVASRAFGVPIDE 723 RD FVVG+GY L+TADYSQIEMRIMAH+SGD GLIEAFNTGEDLHSFV +RAFGVPI+E Sbjct 674 RDGFVVGEGYDSLLTADYSQIEMRIMAHVSGDAGLIEAFNTGEDLHSFVGARAFGVPIEE 733 Query 724 VTGELRRRVKAMSYGLAYGLSAYGLSQQLKISTEEANEQMDAYFARFGGVRDYLRAVVER 783 VT ELRRRVKAMSYGLAYGLSA+GL+ QLKISTEEA QM+AYFARFGGVRDYL VVE+ Sbjct 734 VTPELRRRVKAMSYGLAYGLSAFGLAAQLKISTEEAKSQMEAYFARFGGVRDYLHEVVEQ 793 Query 784 ARKDGYTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIQVDKALN 843 ARKDGYTST+ GRRRYLP+L S NRQ RE AERAALNAPIQG+AADIIKVAMI V ++L Sbjct 794 ARKDGYTSTLYGRRRYLPDLTSDNRQRREVAERAALNAPIQGTAADIIKVAMINVQRSLR 853 Query 844 EAQLASRMLLQVHDELLFEIAPGERERVEALVRDKMGGAYPLDVPLEVSVGYGRSWDAAA 903 EA L SRMLLQVHDEL+ E+ ERE+VE LVRDKM A L VPL+VSVG GRSWDAAA Sbjct 854 EAGLKSRMLLQVHDELVLEVVDSEREQVEQLVRDKMSSAIELSVPLDVSVGTGRSWDAAA 913 Query 904 H 904 H Sbjct 914 H 914 >gi|111018004|ref|YP_700976.1| DNA polymerase I [Rhodococcus jostii RHA1] gi|110817534|gb|ABG92818.1| DNA-directed DNA polymerase I [Rhodococcus jostii RHA1] Length=914 Score = 1332 bits (3446), Expect = 0.0, Method: Compositional matrix adjust. Identities = 681/892 (77%), Positives = 762/892 (86%), Gaps = 2/892 (0%) Query 14 KPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLRDEAPTHIAAAFD 73 +PTLMLLDG+SLAFRAFYALPAENFKT G TNAVYGFT+MLINLLRDE P+H+AAAFD Sbjct 24 RPTLMLLDGHSLAFRAFYALPAENFKTHSGQVTNAVYGFTSMLINLLRDEQPSHVAAAFD 83 Query 74 VSRQTFRLQRYPEYKANRSSTPDEFAGQIDITKEVLGALGITVLSEPGFEADDLIATLAT 133 VSRQTFR +++PEYKANRS PDEF GQ++ITK+VLGALGI V++E GFEADD+IATL T Sbjct 84 VSRQTFRAEKFPEYKANRSKAPDEFKGQVEITKDVLGALGIPVMAEEGFEADDIIATLTT 143 Query 134 QAENEGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVVEKYGLTPRQYPDF 193 QAE GYRVLVVTGDRD+LQLV+D VTVLYP+KGVS+LTRFTP AV EKYGLTP QYPDF Sbjct 144 QAEALGYRVLVVTGDRDSLQLVTDGVTVLYPKKGVSDLTRFTPAAVEEKYGLTPAQYPDF 203 Query 194 AALRGDPSDNLPGIPGVGEKTAAKWIAEYGSLRSLVDNVDAVRGKVGDALRANLASVVRN 253 AALRGDPSDNLPGIPGVGEKTA KWI EYG L LVDNVD VRGKVGDALR NL +V+ N Sbjct 204 AALRGDPSDNLPGIPGVGEKTATKWIKEYGDLVGLVDNVDKVRGKVGDALRENLPNVLLN 263 Query 254 RELTDLVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFDTLAAAGGPEVDEG 313 RELT++VRDVPL TPD L L WDR+ IH LFDDLEF+VLRDRLF TLA E +EG Sbjct 264 RELTEMVRDVPLPYTPDQLMLAQWDREKIHALFDDLEFKVLRDRLFATLAPVEA-EAEEG 322 Query 314 FDVRGGALAPGTVRQWLAEHAGDGRRAGLTVVGTHLPHGGDATAMAVAAADGEGAYLDTA 373 F+VRG AL PG V WL+ HA G R+G++VVGT P+GGD TA+AVAAADGEGAY+ TA Sbjct 323 FEVRGSALDPGAVADWLSAHASTGERSGVSVVGTRTPYGGDVTAIAVAAADGEGAYIATA 382 Query 374 TLTPDDDAALAAWLADPAKPKALHEAKAAVHDLAGRGWTLEGVTSDTALAAYLVRPGQRS 433 + TP+D+ AL WLAD +PKALHEAK A+H L GRGW L G+TSDTALAAYLVRPGQR+ Sbjct 383 SATPEDEKALGDWLADADQPKALHEAKWAMHALRGRGWVLGGLTSDTALAAYLVRPGQRT 442 Query 434 FTLDDLSLRYLRRELRAETPQQQQLSLLDD-DDTDAETIQTTILRARAVIDLADALDAEL 492 F LDDLSLRYLRRELR E ++QLSLLDD D DAE +T IL ARAV+DLA ALD EL Sbjct 443 FNLDDLSLRYLRRELRVEETGEEQLSLLDDADQVDAEAAETEILSARAVLDLAAALDTEL 502 Query 493 ARIDSTALLGEMELPVQRVLAKMESAGIAVDLPMLTELQSQFGDQIRDAAEAAYGVIGKQ 552 I+STALL EMELP+ VLA +E++GIAVD L +LQS+F ++ AAEAAYGVIGKQ Sbjct 503 DNIESTALLSEMELPLLEVLADIEASGIAVDGTHLHDLQSRFAAEVSAAAEAAYGVIGKQ 562 Query 553 INLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFDKTGHPFLQHLLAHRDVTRL 612 INLGSPKQLQVVLFDEL MPKTK+TKTGYTTDA+ALQ+LF+KT HPFL+HLLAHRD TRL Sbjct 563 INLGSPKQLQVVLFDELEMPKTKKTKTGYTTDAEALQNLFEKTSHPFLEHLLAHRDATRL 622 Query 613 KVTVDGLLQAVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAGRRIRDAFVVGDG 672 KVTVDGLL+ VA DGRIHTTFNQT+AATGRLSSTEPNLQNIP+RTDAGR+IRD FVVG+G Sbjct 623 KVTVDGLLKTVAEDGRIHTTFNQTVAATGRLSSTEPNLQNIPVRTDAGRQIRDGFVVGEG 682 Query 673 YAELMTADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFVASRAFGVPIDEVTGELRRRV 732 Y L+TADYSQIEMRIMAH+SGDEGLIEAFNTGEDLHSFV +RAFGVPI+EVT ELRRRV Sbjct 683 YDSLLTADYSQIEMRIMAHVSGDEGLIEAFNTGEDLHSFVGARAFGVPIEEVTPELRRRV 742 Query 733 KAMSYGLAYGLSAYGLSQQLKISTEEANEQMDAYFARFGGVRDYLRAVVERARKDGYTST 792 KAMSYGLAYGLSA+GL+ QLKISTEEA QM+AYFARFGGVRDYL VVE+ARKDGYTST Sbjct 743 KAMSYGLAYGLSAFGLAAQLKISTEEAKSQMEAYFARFGGVRDYLHEVVEQARKDGYTST 802 Query 793 VLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIQVDKALNEAQLASRML 852 + GRRRYLP+L S NRQ RE AERAALNAPIQG+AADIIKVAMI V ++L +A L SRML Sbjct 803 LYGRRRYLPDLTSDNRQRREVAERAALNAPIQGTAADIIKVAMINVQRSLRDAGLKSRML 862 Query 853 LQVHDELLFEIAPGERERVEALVRDKMGGAYPLDVPLEVSVGYGRSWDAAAH 904 LQVHDEL+ E+ ERE+VE LVRDKM A L VPL+VSVG GRSWDAAAH Sbjct 863 LQVHDELVLEVVDSEREQVEQLVRDKMSSAIELSVPLDVSVGTGRSWDAAAH 914 >gi|226306809|ref|YP_002766769.1| DNA polymerase I [Rhodococcus erythropolis PR4] gi|226185926|dbj|BAH34030.1| DNA polymerase I [Rhodococcus erythropolis PR4] Length=915 Score = 1327 bits (3434), Expect = 0.0, Method: Compositional matrix adjust. Identities = 672/892 (76%), Positives = 757/892 (85%), Gaps = 2/892 (0%) Query 14 KPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLRDEAPTHIAAAFD 73 +P LMLLDG+SLAFRAFYALPAENFKT G TNAVYGFT+MLINLLRDE PTH+AAAFD Sbjct 25 RPLLMLLDGHSLAFRAFYALPAENFKTHSGQATNAVYGFTSMLINLLRDEQPTHLAAAFD 84 Query 74 VSRQTFRLQRYPEYKANRSSTPDEFAGQIDITKEVLGALGITVLSEPGFEADDLIATLAT 133 VSRQTFR +PEYKA R+ PDEF GQIDITK+VLGALGI V++E GFEADD+IATL T Sbjct 85 VSRQTFRADLFPEYKAQRAKAPDEFKGQIDITKDVLGALGIPVMAEEGFEADDVIATLTT 144 Query 134 QAENEGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVVEKYGLTPRQYPDF 193 QAE GYRVLVVTGDRD+LQLV+D+VTVLYP+KGVSELTRFT AV EKY LTP QYPDF Sbjct 145 QAEALGYRVLVVTGDRDSLQLVTDNVTVLYPKKGVSELTRFTQTAVEEKYSLTPSQYPDF 204 Query 194 AALRGDPSDNLPGIPGVGEKTAAKWIAEYGSLRSLVDNVDAVRGKVGDALRANLASVVRN 253 AALRGDPSDNLPGIPGVGEKTA KWI EYG L+ LVDNVD VRGKVGD+LR NLA+V+ N Sbjct 205 AALRGDPSDNLPGIPGVGEKTATKWIREYGDLQGLVDNVDKVRGKVGDSLRENLANVLLN 264 Query 254 RELTDLVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFDTLAAAGGPEVDEG 313 R+LT++VRDVPL TP+ L L PWDR+ IH LFDDLEF+VLRDRLF TL+++ PE +EG Sbjct 265 RQLTEMVRDVPLPYTPEQLVLAPWDREKIHALFDDLEFKVLRDRLFATLSSSE-PEAEEG 323 Query 314 FDVRGGALAPGTVRQWLAEHAGDGRRAGLTVVGTHLPHGGDATAMAVAAADGEGAYLDTA 373 F+V G ALAPG V WL HA G R G+TV+GT P GD TA+A+AA+DGE AY+ + Sbjct 324 FEVSGDALAPGAVAAWLDAHARTGERHGVTVLGTRTPFAGDVTALAIAASDGECAYIAAS 383 Query 374 TLTPDDDAALAAWLADPAKPKALHEAKAAVHDLAGRGWTLEGVTSDTALAAYLVRPGQRS 433 T TP+D+AAL WLAD ++PKALHEAK A+H L GRGWTL G+TSDTALAAYLVRPGQRS Sbjct 384 TATPEDEAALGDWLADASQPKALHEAKWAIHALRGRGWTLGGLTSDTALAAYLVRPGQRS 443 Query 434 FTLDDLSLRYLRRELRAETPQQQQLSLLDD-DDTDAETIQTTILRARAVIDLADALDAEL 492 F LDDLSLRYL+RELRAET Q+QLSLLDD + DAE +T +L A+AV+DLA ALD EL Sbjct 444 FNLDDLSLRYLKRELRAETSGQEQLSLLDDTEQLDAEAAETAMLSAQAVLDLAAALDTEL 503 Query 493 ARIDSTALLGEMELPVQRVLAKMESAGIAVDLPMLTELQSQFGDQIRDAAEAAYGVIGKQ 552 I+S +LL +MELP+ LA++E+ GIAVD L +LQS+F Q+ DAA +AY VI KQ Sbjct 504 ESIESKSLLSDMELPLTIELAQIEATGIAVDSAHLHDLQSRFASQVADAANSAYEVIDKQ 563 Query 553 INLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFDKTGHPFLQHLLAHRDVTRL 612 INLGSPKQLQVVLF+EL MPKTK+TKTGYTTDA+ALQ LFDKTGHPFL+HLLAHRD TR+ Sbjct 564 INLGSPKQLQVVLFEELDMPKTKKTKTGYTTDAEALQGLFDKTGHPFLEHLLAHRDATRM 623 Query 613 KVTVDGLLQAVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAGRRIRDAFVVGDG 672 KVTVDGLL+AVA DGRIHTTFNQT+AATGRLSST+PNLQNIP+R DAGR IRD FVVG G Sbjct 624 KVTVDGLLKAVAEDGRIHTTFNQTVAATGRLSSTDPNLQNIPVRNDAGREIRDGFVVGQG 683 Query 673 YAELMTADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFVASRAFGVPIDEVTGELRRRV 732 + L+TADYSQIEMRIMAH+SGDEGLIEAFNTGEDLHSFV SRAFGVPI+EVT ELRRRV Sbjct 684 FDVLLTADYSQIEMRIMAHVSGDEGLIEAFNTGEDLHSFVGSRAFGVPIEEVTPELRRRV 743 Query 733 KAMSYGLAYGLSAYGLSQQLKISTEEANEQMDAYFARFGGVRDYLRAVVERARKDGYTST 792 KAMSYGLAYGLSAYGL+ QLKISTEEA +QMDAYFARFGGVRDYL AVVE+ARKDGYTST Sbjct 744 KAMSYGLAYGLSAYGLASQLKISTEEAKQQMDAYFARFGGVRDYLHAVVEQARKDGYTST 803 Query 793 VLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIQVDKALNEAQLASRML 852 + GRRRYLP+L+S NRQ RE AERAALNAPIQG+AADIIKVAMI V KAL EA L SRML Sbjct 804 LYGRRRYLPDLNSDNRQRREVAERAALNAPIQGTAADIIKVAMINVQKALAEAGLKSRML 863 Query 853 LQVHDELLFEIAPGERERVEALVRDKMGGAYPLDVPLEVSVGYGRSWDAAAH 904 LQVHDEL+ E+ E E V ALV+DKM A L VPL+VSVG GRSWD+AAH Sbjct 864 LQVHDELVLEVVASELEEVTALVKDKMATAIELSVPLDVSVGTGRSWDSAAH 915 >gi|229492694|ref|ZP_04386495.1| DNA polymerase I family protein [Rhodococcus erythropolis SK121] gi|229320353|gb|EEN86173.1| DNA polymerase I family protein [Rhodococcus erythropolis SK121] Length=887 Score = 1323 bits (3424), Expect = 0.0, Method: Compositional matrix adjust. Identities = 669/888 (76%), Positives = 755/888 (86%), Gaps = 2/888 (0%) Query 18 MLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLRDEAPTHIAAAFDVSRQ 77 MLLDG+SLAFRAFYALPAENFKT G TNAVYGFT+MLINLLRDE PTH+AAAFDVSRQ Sbjct 1 MLLDGHSLAFRAFYALPAENFKTHSGQATNAVYGFTSMLINLLRDEQPTHLAAAFDVSRQ 60 Query 78 TFRLQRYPEYKANRSSTPDEFAGQIDITKEVLGALGITVLSEPGFEADDLIATLATQAEN 137 TFR +PEYKA R+ PDEF GQIDITK+VLGALGI V++E GFEADD+IATL TQAE Sbjct 61 TFRADLFPEYKAQRAKAPDEFKGQIDITKDVLGALGIPVMAEEGFEADDVIATLTTQAEA 120 Query 138 EGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVVEKYGLTPRQYPDFAALR 197 GYRVLVVTGDRD+LQLV+D+VTVLYP+KGVSELTRFTP AV EKY L+P QYPDFAALR Sbjct 121 LGYRVLVVTGDRDSLQLVTDNVTVLYPKKGVSELTRFTPTAVEEKYSLSPSQYPDFAALR 180 Query 198 GDPSDNLPGIPGVGEKTAAKWIAEYGSLRSLVDNVDAVRGKVGDALRANLASVVRNRELT 257 GDPSDNLPGIPGVGEKTA KWI EYG L+ LVDNVD VRGKVGD+LR NLA+V+ NR+LT Sbjct 181 GDPSDNLPGIPGVGEKTATKWIREYGDLQGLVDNVDKVRGKVGDSLRENLANVLLNRQLT 240 Query 258 DLVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFDTLAAAGGPEVDEGFDVR 317 ++VRDVPL TP+ L L PWDR+ IH LFDDLEF+VLRDRLF TL+++ PE +EGF+V Sbjct 241 EMVRDVPLPYTPEQLVLAPWDREKIHALFDDLEFKVLRDRLFATLSSSE-PEAEEGFEVS 299 Query 318 GGALAPGTVRQWLAEHAGDGRRAGLTVVGTHLPHGGDATAMAVAAADGEGAYLDTATLTP 377 G ALAPG V WL HA G R G+TV+GT P GD TA+A+AA+DGE AY+ +T TP Sbjct 300 GDALAPGAVAAWLDAHARTGERHGVTVLGTRTPFAGDVTALAIAASDGECAYIAASTATP 359 Query 378 DDDAALAAWLADPAKPKALHEAKAAVHDLAGRGWTLEGVTSDTALAAYLVRPGQRSFTLD 437 +D+AAL WLAD ++PKALHEAK A+H L GRGWTL G+TSDTALAAYLVRPGQRSF LD Sbjct 360 EDEAALGDWLADASQPKALHEAKWAIHALRGRGWTLGGLTSDTALAAYLVRPGQRSFNLD 419 Query 438 DLSLRYLRRELRAETPQQQQLSLLDD-DDTDAETIQTTILRARAVIDLADALDAELARID 496 DLSLRYL+RELRAET Q+QLSLLDD + DAE +T +L A+AV+DLA ALD EL I+ Sbjct 420 DLSLRYLKRELRAETSGQEQLSLLDDTEQLDAEAAETAMLSAQAVLDLAAALDTELESIE 479 Query 497 STALLGEMELPVQRVLAKMESAGIAVDLPMLTELQSQFGDQIRDAAEAAYGVIGKQINLG 556 S +LL +MELP+ LA++E+ GIAVD L +LQS+F Q+ DAA +AY VI KQINLG Sbjct 480 SKSLLSDMELPLTIELAQIEATGIAVDSAHLHDLQSRFASQVADAANSAYEVIDKQINLG 539 Query 557 SPKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFDKTGHPFLQHLLAHRDVTRLKVTV 616 SPKQLQVVLF+EL MPKTK+TKTGYTTDA+ALQ LFDKTGHPFL+HLLAHRD TR+KVTV Sbjct 540 SPKQLQVVLFEELDMPKTKKTKTGYTTDAEALQGLFDKTGHPFLEHLLAHRDATRMKVTV 599 Query 617 DGLLQAVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAGRRIRDAFVVGDGYAEL 676 DGLL+AVA DGRIHTTFNQT+AATGRLSST+PNLQNIP+R DAGR IRD FVVG G+ L Sbjct 600 DGLLKAVAEDGRIHTTFNQTVAATGRLSSTDPNLQNIPVRNDAGREIRDGFVVGQGFDVL 659 Query 677 MTADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFVASRAFGVPIDEVTGELRRRVKAMS 736 +TADYSQIEMRIMAH+SGDEGLIEAFNTGEDLHSFV SRAFGVPI+EVT ELRRRVKAMS Sbjct 660 LTADYSQIEMRIMAHVSGDEGLIEAFNTGEDLHSFVGSRAFGVPIEEVTPELRRRVKAMS 719 Query 737 YGLAYGLSAYGLSQQLKISTEEANEQMDAYFARFGGVRDYLRAVVERARKDGYTSTVLGR 796 YGLAYGLSAYGL+ QLKISTEEA +QMDAYFARFGGVRDYL AVVE+ARKDGYTST+ GR Sbjct 720 YGLAYGLSAYGLASQLKISTEEAKQQMDAYFARFGGVRDYLHAVVEQARKDGYTSTLYGR 779 Query 797 RRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIQVDKALNEAQLASRMLLQVH 856 RRYLP+L+S NRQ RE AERAALNAPIQG+AADIIKVAMI V KAL +A L SRMLLQVH Sbjct 780 RRYLPDLNSDNRQRREVAERAALNAPIQGTAADIIKVAMINVQKALADAGLKSRMLLQVH 839 Query 857 DELLFEIAPGERERVEALVRDKMGGAYPLDVPLEVSVGYGRSWDAAAH 904 DEL+ E+ E E V ALV+DKM A L VPL+VSVG GRSWD+AAH Sbjct 840 DELVLEVVASELEEVTALVKDKMATAIELSVPLDVSVGTGRSWDSAAH 887 >gi|333919148|ref|YP_004492729.1| DNA polymerase I [Amycolicicoccus subflavus DQS3-9A1] gi|333481369|gb|AEF39929.1| DNA polymerase I [Amycolicicoccus subflavus DQS3-9A1] Length=900 Score = 1314 bits (3401), Expect = 0.0, Method: Compositional matrix adjust. Identities = 655/896 (74%), Positives = 750/896 (84%), Gaps = 7/896 (0%) Query 15 PTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLRDEAPTHIAAAFDV 74 P L+LLDG+SLA+RAF+ALPAENF+T G TTNAVYGFT+MLINLLRDE PTHIA AFDV Sbjct 6 PRLLLLDGHSLAYRAFFALPAENFRTSSGQTTNAVYGFTSMLINLLRDEQPTHIAVAFDV 65 Query 75 SRQTFRLQRYPEYKANRSSTPDEFAGQIDITKEVLGALGITVLSEPGFEADDLIATLATQ 134 SRQTFR + +PEYKANRS TPDEF GQ+D+TK+VL A+GI V++EPGFEADD+IATL TQ Sbjct 66 SRQTFRAETFPEYKANRSKTPDEFRGQVDLTKDVLAAMGIPVMAEPGFEADDIIATLTTQ 125 Query 135 AENEGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVVEKYGLTPRQYPDFA 194 A GY+VL+ TGDRDALQLVSD VTVLYP++GVS+LTRFTPEAV KYGL+P+QYPD+A Sbjct 126 ATGLGYQVLICTGDRDALQLVSDAVTVLYPKRGVSDLTRFTPEAVEAKYGLSPQQYPDYA 185 Query 195 ALRGDPSDNLPGIPGVGEKTAAKWIAEYGSLRSLVDNVDAVRGKVGDALRANLASVVRNR 254 ALRGDPSDNLPGIPGVGEKTAAKWI EYGSL +LV+ VDAVRGKVGDALR NL+SV+ NR Sbjct 186 ALRGDPSDNLPGIPGVGEKTAAKWIREYGSLETLVEKVDAVRGKVGDALRQNLSSVLMNR 245 Query 255 ELTDLVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFDTLAAAGGPEVDEGF 314 +LT++VRDVPL +PD L + WDR+ IH+LFDDLEFRVLRDRLF+TLA+ PE + GF Sbjct 246 QLTEMVRDVPLPFSPDQLEVSVWDRERIHQLFDDLEFRVLRDRLFETLASP-EPEAESGF 304 Query 315 DVRGGALAPGTVRQWLAEHAGDGRRAGLTVVGTHLPHGGDATAMAVAAADGEGAYLDTAT 374 +VRG L PG V +WL HA G R GL+VVGT DAT +A+AAADGEGA++ T Sbjct 305 EVRGRILEPGEVAKWLNVHAVSGARHGLSVVGTRQVFASDATGVAIAAADGEGAFIAVET 364 Query 375 LTPDDDAALAAWLADPAKPKALHEAKAAVHDLAGRGWTLEGVTSDTALAAYLVRPGQRSF 434 +T DDAA+AAWL +P + KA+H+ K A+H L GRGW L GVTSDTALAAYLVRPGQRSF Sbjct 365 VTEADDAAIAAWLGNPEQRKAVHDVKWAIHALRGRGWALRGVTSDTALAAYLVRPGQRSF 424 Query 435 TLDDLSLRYLRRELRAETPQQQQLSLLDD-DDTDAETIQTTILRARAVIDLADALDAELA 493 LDDLSLRYL+RELRAE Q QLSLLDD +D+ + +T ILRARAV+DLA+ALD+EL Sbjct 425 NLDDLSLRYLKRELRAEDTGQGQLSLLDDENDSQRQHAETEILRARAVVDLAEALDSELD 484 Query 494 RIDSTALLGEMELPVQRVLAKMESAGIAVDLPMLTELQSQFGDQIRDAAEAAYGVIGKQI 553 I+S LL EMELP+ VLA +E+AGIAVDL ML LQ QF Q+ DAAEAAYGVIGKQI Sbjct 485 TIESRTLLSEMELPLASVLADLEAAGIAVDLDMLGNLQRQFASQVNDAAEAAYGVIGKQI 544 Query 554 NLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFDKTGHPFLQHLLAHRDVTRLK 613 NLGSPKQLQVVLFDEL MPKTKRTKTGYTTDA+AL +LF+KT HPFL+HLL HRD +LK Sbjct 545 NLGSPKQLQVVLFDELDMPKTKRTKTGYTTDAEALAALFEKTQHPFLEHLLTHRDSMKLK 604 Query 614 VTVDGLLQAVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAGRRIRDAFVVG--- 670 TV+GLL+ VA D RIHTTFNQTIAATGRLSSTEPNLQNIPIRT+AGR+IR AFVVG Sbjct 605 TTVEGLLKTVADDSRIHTTFNQTIAATGRLSSTEPNLQNIPIRTEAGRQIRQAFVVGKAA 664 Query 671 DG--YAELMTADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFVASRAFGVPIDEVTGEL 728 DG Y L+TADYSQIEMRIMAHLSGD GLIEAF TGEDLHSFV +RAFGVPIDEVT ++ Sbjct 665 DGTPYDVLLTADYSQIEMRIMAHLSGDAGLIEAFRTGEDLHSFVGARAFGVPIDEVTPDM 724 Query 729 RRRVKAMSYGLAYGLSAYGLSQQLKISTEEANEQMDAYFARFGGVRDYLRAVVERARKDG 788 RRRVKAMSYGLAYGLS YGL+QQLKIS +EA QM+AYF+RFG VRDYL VVE+ARKDG Sbjct 725 RRRVKAMSYGLAYGLSTYGLAQQLKISNDEAKSQMEAYFSRFGAVRDYLHEVVEQARKDG 784 Query 789 YTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIQVDKALNEAQLA 848 YTST+ GRRRYLP+L S NRQ RE AERAALNAPIQGSAADIIKVAM++V +AL L Sbjct 785 YTSTIFGRRRYLPDLTSDNRQRREVAERAALNAPIQGSAADIIKVAMLRVYEALQRENLR 844 Query 849 SRMLLQVHDELLFEIAPGERERVEALVRDKMGGAYPLDVPLEVSVGYGRSWDAAAH 904 SRMLLQVHDEL+ E+ ERE+VE LVR +M GAY L VPL+VSVG G+SW++A H Sbjct 845 SRMLLQVHDELVLEVVNAEREQVEDLVRREMAGAYELSVPLDVSVGQGQSWESAGH 900 >gi|325674214|ref|ZP_08153903.1| DNA-directed DNA polymerase I [Rhodococcus equi ATCC 33707] gi|325554894|gb|EGD24567.1| DNA-directed DNA polymerase I [Rhodococcus equi ATCC 33707] Length=912 Score = 1295 bits (3351), Expect = 0.0, Method: Compositional matrix adjust. Identities = 682/892 (77%), Positives = 763/892 (86%), Gaps = 2/892 (0%) Query 14 KPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLRDEAPTHIAAAFD 73 +PTLMLLDG+SLA+RAF+ALPAENFKT+ G TNAVYGFT+MLINLLRDE PTH+AAAFD Sbjct 22 RPTLMLLDGHSLAYRAFFALPAENFKTQSGQATNAVYGFTSMLINLLRDEQPTHVAAAFD 81 Query 74 VSRQTFRLQRYPEYKANRSSTPDEFAGQIDITKEVLGALGITVLSEPGFEADDLIATLAT 133 VSRQTFR + +PEYKANRS TPDEF GQ++ITK+VL A+GI V++ GFEADD+IATL T Sbjct 82 VSRQTFRAEAFPEYKANRSKTPDEFKGQVEITKDVLAAMGIPVMAIEGFEADDVIATLTT 141 Query 134 QAENEGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVVEKYGLTPRQYPDF 193 QA GYRVLVVTGDRD+LQLV++DVTVLYPRKGVS+LTRFTP AV EKYGLTP+QYPD+ Sbjct 142 QATALGYRVLVVTGDRDSLQLVTEDVTVLYPRKGVSDLTRFTPAAVEEKYGLTPQQYPDY 201 Query 194 AALRGDPSDNLPGIPGVGEKTAAKWIAEYGSLRSLVDNVDAVRGKVGDALRANLASVVRN 253 AALRGDPSDNLPGIPGVGEKTAAKWI EYGSL +LV++VD VRGKVGDALRAN+ SV+ N Sbjct 202 AALRGDPSDNLPGIPGVGEKTAAKWIREYGSLENLVNDVDKVRGKVGDALRANVNSVLLN 261 Query 254 RELTDLVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFDTLAAAGGPEVDEG 313 R LT++VRDV + TPD L L PWDR+ IH LFDDLEF+VLRDRLF TL++ PE +EG Sbjct 262 RHLTEMVRDVAVPYTPDQLALAPWDRERIHALFDDLEFKVLRDRLFATLSSTE-PEAEEG 320 Query 314 FDVRGGALAPGTVRQWLAEHAGDGRRAGLTVVGTHLPHGGDATAMAVAAADGEGAYLDTA 373 F+V G ALAPG V W+AEHA G R GL+VVGT PHGGD TA+A+AA DGEGAY+ T Sbjct 321 FEVSGRALAPGEVAAWIAEHASTGERHGLSVVGTTTPHGGDVTAVAIAAPDGEGAYISTT 380 Query 374 TLTPDDDAALAAWLADPAKPKALHEAKAAVHDLAGRGWTLEGVTSDTALAAYLVRPGQRS 433 T TP+D+AALA WLAD +PKALHEAK A+H L GRGWTL G+TSDTALAAYLVRPGQRS Sbjct 381 TATPEDEAALADWLADAGRPKALHEAKRAMHALRGRGWTLAGLTSDTALAAYLVRPGQRS 440 Query 434 FTLDDLSLRYLRRELRAETPQQQQLSLLDDDDTDAETIQTT-ILRARAVIDLADALDAEL 492 F LDDLSLRYL+RELR E QQQLSLLDD+D ILR+RAV+DLA ALD EL Sbjct 441 FNLDDLSLRYLKRELRVEESGQQQLSLLDDEDAADAEAAEGEILRSRAVLDLAAALDTEL 500 Query 493 ARIDSTALLGEMELPVQRVLAKMESAGIAVDLPMLTELQSQFGDQIRDAAEAAYGVIGKQ 552 A I++T LL +MELP+ VLA +ES GIAVD L +LQS F ++ +AAEAAY VIGKQ Sbjct 501 ADIEATGLLADMELPLLEVLANLESTGIAVDTTHLHDLQSAFAARVAEAAEAAYAVIGKQ 560 Query 553 INLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFDKTGHPFLQHLLAHRDVTRL 612 INLGSPKQLQVVLFDEL MPKTK+TKTGYTTDADALQSLF+KT HPFL+HLL HRD TRL Sbjct 561 INLGSPKQLQVVLFDELDMPKTKKTKTGYTTDADALQSLFEKTQHPFLEHLLEHRDATRL 620 Query 613 KVTVDGLLQAVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAGRRIRDAFVVGDG 672 KVTVDGLL+ VA DGRIHTTFNQT+AATGRLSSTEPNLQNIP+RTDAGR+IRD FVVG+G Sbjct 621 KVTVDGLLKTVAEDGRIHTTFNQTVAATGRLSSTEPNLQNIPVRTDAGRQIRDGFVVGEG 680 Query 673 YAELMTADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFVASRAFGVPIDEVTGELRRRV 732 Y L+TADYSQIEMRIMAHLSGD GLIEAF TGEDLHSFV SRAFGVPI+EVT ELRRRV Sbjct 681 YETLLTADYSQIEMRIMAHLSGDAGLIEAFITGEDLHSFVGSRAFGVPIEEVTPELRRRV 740 Query 733 KAMSYGLAYGLSAYGLSQQLKISTEEANEQMDAYFARFGGVRDYLRAVVERARKDGYTST 792 KAMSYGLAYGLSA+GL+ QLKISTEEA +QMDAYFARFGGVRDYL VVE+ARK GYT T Sbjct 741 KAMSYGLAYGLSAFGLAAQLKISTEEARQQMDAYFARFGGVRDYLHEVVEQARKVGYTET 800 Query 793 VLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIQVDKALNEAQLASRML 852 + GRRRYLP+L+S NRQ RE AERAALNAPIQG+AADIIKVAMI V +AL EA LASRML Sbjct 801 LFGRRRYLPDLNSDNRQRREVAERAALNAPIQGTAADIIKVAMIDVQRALREAGLASRML 860 Query 853 LQVHDELLFEIAPGERERVEALVRDKMGGAYPLDVPLEVSVGYGRSWDAAAH 904 LQVHDEL+ E+A GERERVE LVR+KM A L VPLEVSVG GRSWDAAAH Sbjct 861 LQVHDELVLEVAAGERERVEQLVREKMAAAIDLSVPLEVSVGTGRSWDAAAH 912 >gi|312139906|ref|YP_004007242.1| DNA polymerase i pola1 [Rhodococcus equi 103S] gi|311889245|emb|CBH48559.1| DNA polymerase I PolA1 [Rhodococcus equi 103S] Length=912 Score = 1287 bits (3330), Expect = 0.0, Method: Compositional matrix adjust. Identities = 679/892 (77%), Positives = 760/892 (86%), Gaps = 2/892 (0%) Query 14 KPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLRDEAPTHIAAAFD 73 +PTLMLLDG+SLA+RAF+ALPAENFKT+ G TNAVYGFT+MLINLLRDE PTH+AAAFD Sbjct 22 RPTLMLLDGHSLAYRAFFALPAENFKTQSGQATNAVYGFTSMLINLLRDEQPTHVAAAFD 81 Query 74 VSRQTFRLQRYPEYKANRSSTPDEFAGQIDITKEVLGALGITVLSEPGFEADDLIATLAT 133 VSRQTFR + +PEYKANRS TPDEF GQ++ITK+VL A+GI V++ GFEADD+IATL T Sbjct 82 VSRQTFRAEAFPEYKANRSKTPDEFKGQVEITKDVLAAMGIPVMAIEGFEADDVIATLTT 141 Query 134 QAENEGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVVEKYGLTPRQYPDF 193 QA GYRVLVVTGDRD+LQLV+DDVTVLYPRKGVS+L RFTP AV EKYGLTP+QYPD+ Sbjct 142 QATALGYRVLVVTGDRDSLQLVTDDVTVLYPRKGVSDLARFTPAAVEEKYGLTPQQYPDY 201 Query 194 AALRGDPSDNLPGIPGVGEKTAAKWIAEYGSLRSLVDNVDAVRGKVGDALRANLASVVRN 253 AALRGDPSDNLPGIPGVGEKTAAKWI EYGSL +LV++VD VRGKVGDALRAN+ SV+ N Sbjct 202 AALRGDPSDNLPGIPGVGEKTAAKWIREYGSLENLVNDVDKVRGKVGDALRANVNSVLLN 261 Query 254 RELTDLVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFDTLAAAGGPEVDEG 313 R LT++VRDV + TPD L L PWDR+ IH LFDDLEF+VLRDRLF TL++ PE +EG Sbjct 262 RHLTEMVRDVAVPYTPDQLALAPWDRERIHALFDDLEFKVLRDRLFATLSSTE-PEAEEG 320 Query 314 FDVRGGALAPGTVRQWLAEHAGDGRRAGLTVVGTHLPHGGDATAMAVAAADGEGAYLDTA 373 F+V G ALAPG V W+AEHA G R GL+VVGT P+GGD TA+A+AA DGEGAY+ T Sbjct 321 FEVSGRALAPGEVAAWIAEHASTGERHGLSVVGTTTPYGGDVTAVAIAAPDGEGAYISTT 380 Query 374 TLTPDDDAALAAWLADPAKPKALHEAKAAVHDLAGRGWTLEGVTSDTALAAYLVRPGQRS 433 T TP+D+AALA WLAD +PKALHEAK A+H L GRGW L G+TSDTALAAYLVRPGQRS Sbjct 381 TATPEDEAALADWLADAGRPKALHEAKRAMHALRGRGWMLAGLTSDTALAAYLVRPGQRS 440 Query 434 FTLDDLSLRYLRRELRAETPQQQQLSLLDDDDTDAETIQTT-ILRARAVIDLADALDAEL 492 F LDDLSLRYL+RELR E QQQLSLLDD+D ILR+RAV DLA ALD EL Sbjct 441 FNLDDLSLRYLKRELRVEESGQQQLSLLDDEDAADAEAAEGEILRSRAVRDLAAALDTEL 500 Query 493 ARIDSTALLGEMELPVQRVLAKMESAGIAVDLPMLTELQSQFGDQIRDAAEAAYGVIGKQ 552 A I++T LL +MELP+ VLA +ES GIAVD L +LQS F ++ +AAEAAY VIGKQ Sbjct 501 ADIEATGLLADMELPLLEVLANLESTGIAVDTTHLHDLQSAFAARVAEAAEAAYAVIGKQ 560 Query 553 INLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFDKTGHPFLQHLLAHRDVTRL 612 INLGSPKQLQVVLFDEL MPKTK+TKTGYTTDADALQSLF+KT HPFL+HLL HRD TRL Sbjct 561 INLGSPKQLQVVLFDELDMPKTKKTKTGYTTDADALQSLFEKTQHPFLEHLLEHRDATRL 620 Query 613 KVTVDGLLQAVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAGRRIRDAFVVGDG 672 KVTVDGLL+ VA DGRIHTTFNQT+AATGRLSSTEPNLQNIP+RTDAGR+IRD FVVG+G Sbjct 621 KVTVDGLLKTVAEDGRIHTTFNQTVAATGRLSSTEPNLQNIPVRTDAGRQIRDGFVVGEG 680 Query 673 YAELMTADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFVASRAFGVPIDEVTGELRRRV 732 Y L+TADYSQIEMRIMAHLSGD GLIEAF TGEDLHSFV SRAFGVPI+EVT ELRRRV Sbjct 681 YETLLTADYSQIEMRIMAHLSGDAGLIEAFITGEDLHSFVGSRAFGVPIEEVTPELRRRV 740 Query 733 KAMSYGLAYGLSAYGLSQQLKISTEEANEQMDAYFARFGGVRDYLRAVVERARKDGYTST 792 KAMSYGLAYGLSA+GL+ QLKISTEEA +QMDAYFARFGGVRDYL VVE+ARK GYT T Sbjct 741 KAMSYGLAYGLSAFGLAAQLKISTEEARQQMDAYFARFGGVRDYLHEVVEQARKVGYTET 800 Query 793 VLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIQVDKALNEAQLASRML 852 + GRRRYLP+L+S NRQ RE AERAALNAPIQG+AADIIKVAMI V +AL EA LASRML Sbjct 801 LFGRRRYLPDLNSDNRQRREVAERAALNAPIQGTAADIIKVAMIDVQRALREAGLASRML 860 Query 853 LQVHDELLFEIAPGERERVEALVRDKMGGAYPLDVPLEVSVGYGRSWDAAAH 904 LQVHDEL+ E+A GERERVE LVR+KM A L VPLEVSVG GRSWD+AAH Sbjct 861 LQVHDELVLEVAAGERERVEQLVREKMAAAIDLSVPLEVSVGTGRSWDSAAH 912 >gi|291007053|ref|ZP_06565026.1| DNA polymerase I [Saccharopolyspora erythraea NRRL 2338] Length=894 Score = 1242 bits (3213), Expect = 0.0, Method: Compositional matrix adjust. Identities = 632/898 (71%), Positives = 742/898 (83%), Gaps = 8/898 (0%) Query 9 SEDRAKPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLRDEAPTHI 68 SEDR L+L+DG+S+A+RAFYALP ENF+T G TNAVYGFT+MLINLLRDE PTH+ Sbjct 3 SEDR---RLLLIDGHSMAYRAFYALPKENFQTGTGQHTNAVYGFTSMLINLLRDEQPTHL 59 Query 69 AAAFDVSRQTFRLQRYPEYKANRSSTPDEFAGQIDITKEVLGALGITVLSEPGFEADDLI 128 A AFDVSR+TFR + + +YKA R +TPDEF GQ+ + ++VL AL + LS+ +EADD+I Sbjct 60 AVAFDVSRKTFRSETFADYKATRGTTPDEFKGQVSLIQDVLAALCVPTLSKEHYEADDVI 119 Query 129 ATLATQAENEGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVVEKYGLTPR 188 ATL TQA EG++V + TGDRDALQLV+D VTVLYP KGVSELTRFTP+AV +KYGL+P Sbjct 120 ATLTTQATGEGFKVSICTGDRDALQLVTDAVTVLYPTKGVSELTRFTPQAVSDKYGLSPE 179 Query 189 QYPDFAALRGDPSDNLPGIPGVGEKTAAKWIAEYGSLRSLVDNVDAVRGKVGDALRANLA 248 QYPDFAALRGDPSDNLP IPGVGEKT KWI ++GSL LVD VD V+GK GDALRANL+ Sbjct 180 QYPDFAALRGDPSDNLPKIPGVGEKTVTKWIQQFGSLAGLVDRVDEVKGKAGDALRANLS 239 Query 249 SVVRNRELTDLVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFDTLAAAGGP 308 +V+ NR+LT+LV+DVPL P L ++ WDRD +HRLFDDLEFRVLR+RLF TL+AA P Sbjct 240 AVLLNRQLTELVKDVPLELAPADLAVRQWDRDAVHRLFDDLEFRVLRERLFSTLSAAE-P 298 Query 309 EVDEGFDVRGGALAPGTVRQWLAEHAGDGRRAGLTVVGTHLPHGGDATAMAVAAADGEGA 368 EV+EGF+V GG LAPG V WL EHA DGRR GL+ T GD +A+ ADG GA Sbjct 299 EVEEGFEVSGGVLAPGAVAAWLDEHARDGRRVGLSFTCTWSRGSGDLDGLALVTADGAGA 358 Query 369 YLDTATLTPDDDAALAAWLADPAKPKALHEAKAAVHDLAGRGWTLEGVTSDTALAAYLVR 428 ++D TLT DD+ AL+AWLADPA PKA H+ K +H + RGW L G++SDTALAAYLVR Sbjct 359 FVDARTLTDDDERALSAWLADPAFPKAAHDVKGPLHAVRDRGWKLAGLSSDTALAAYLVR 418 Query 429 PGQRSFTLDDLSLRYLRRELRAETPQQQ-QLSLLDDDD-TDAETIQTTILRARAVIDLAD 486 PGQRSF L DL +RYL+RELRAE + QLSLL+D++ T A + ++RARAV +LAD Sbjct 419 PGQRSFDLPDLVVRYLQRELRAEQGEDDGQLSLLEDEEQTKAGAAASELVRARAVAELAD 478 Query 487 ALDAELARIDSTALLGEMELPVQRVLAKMESAGIAVDLPMLTELQSQFGDQIRDAAEAAY 546 LD ELARIDST LL E+ELP+ +VL+++E+AGIAVD L L + F +++ AA+ AY Sbjct 479 TLDDELARIDSTRLLTELELPLLQVLSELEAAGIAVDADQLAGLGAHFAARVKQAAQDAY 538 Query 547 GVIGKQINLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFDKTGHPFLQHLLAH 606 GVIGK+INLGSPKQLQVVLFDELGMPKTKRTKTGYTTDA+ALQSL++KT HPFLQH+L H Sbjct 539 GVIGKEINLGSPKQLQVVLFDELGMPKTKRTKTGYTTDAEALQSLYEKTEHPFLQHMLEH 598 Query 607 RDVTRLKVTVDGLLQAVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAGRRIRDA 666 RD TRLK TVDGL++++A DGRIHTT NQTIAATGRLSSTEPNLQNIPIRT+ GRRIR+ Sbjct 599 RDATRLKTTVDGLVKSIADDGRIHTTLNQTIAATGRLSSTEPNLQNIPIRTEEGRRIREV 658 Query 667 FVVGDGYAELMTADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFVASRAFGVPIDEVTG 726 FVVG+GY+ELMTADYSQIEMRIMAHLSGDEGLIEAF TGEDLH++VASRAFGVPIDEV Sbjct 659 FVVGEGYSELMTADYSQIEMRIMAHLSGDEGLIEAFRTGEDLHNYVASRAFGVPIDEVDH 718 Query 727 ELRRRVKAMSYGLAYGLSAYGLSQQLKISTEEANEQMDAYFARFGGVRDYLRAVVERARK 786 ELRRRVKAMSYGLAYGLSA+GL+QQL+ISTE+A EQM+AYFARFG VRDYLR VV++ARK Sbjct 719 ELRRRVKAMSYGLAYGLSAFGLAQQLRISTEDAREQMEAYFARFGSVRDYLRDVVDQARK 778 Query 787 DGYTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIQVDKALNEAQ 846 DGYTST+LGRRRYLP+L+S NRQ R+ AER ALNAPIQGSAADIIKVAM+ V +AL Sbjct 779 DGYTSTILGRRRYLPDLNSDNRQRRDMAERMALNAPIQGSAADIIKVAMLDVHEALRP-- 836 Query 847 LASRMLLQVHDELLFEIAPGERERVEALVRDKMGGAYPLDVPLEVSVGYGRSWDAAAH 904 L SRMLLQVHDEL+ E+A GERE VE LVR++MG AY LDVPLEVSVG G SWDAAAH Sbjct 837 LRSRMLLQVHDELIIEVADGEREEVERLVRERMGAAYALDVPLEVSVGVGGSWDAAAH 894 >gi|134101936|ref|YP_001107597.1| DNA polymerase I [Saccharopolyspora erythraea NRRL 2338] gi|133914559|emb|CAM04672.1| DNA polymerase I [Saccharopolyspora erythraea NRRL 2338] Length=895 Score = 1242 bits (3213), Expect = 0.0, Method: Compositional matrix adjust. Identities = 632/898 (71%), Positives = 742/898 (83%), Gaps = 8/898 (0%) Query 9 SEDRAKPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLRDEAPTHI 68 SEDR L+L+DG+S+A+RAFYALP ENF+T G TNAVYGFT+MLINLLRDE PTH+ Sbjct 4 SEDR---RLLLIDGHSMAYRAFYALPKENFQTGTGQHTNAVYGFTSMLINLLRDEQPTHL 60 Query 69 AAAFDVSRQTFRLQRYPEYKANRSSTPDEFAGQIDITKEVLGALGITVLSEPGFEADDLI 128 A AFDVSR+TFR + + +YKA R +TPDEF GQ+ + ++VL AL + LS+ +EADD+I Sbjct 61 AVAFDVSRKTFRSETFADYKATRGTTPDEFKGQVSLIQDVLAALCVPTLSKEHYEADDVI 120 Query 129 ATLATQAENEGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVVEKYGLTPR 188 ATL TQA EG++V + TGDRDALQLV+D VTVLYP KGVSELTRFTP+AV +KYGL+P Sbjct 121 ATLTTQATGEGFKVSICTGDRDALQLVTDAVTVLYPTKGVSELTRFTPQAVSDKYGLSPE 180 Query 189 QYPDFAALRGDPSDNLPGIPGVGEKTAAKWIAEYGSLRSLVDNVDAVRGKVGDALRANLA 248 QYPDFAALRGDPSDNLP IPGVGEKT KWI ++GSL LVD VD V+GK GDALRANL+ Sbjct 181 QYPDFAALRGDPSDNLPKIPGVGEKTVTKWIQQFGSLAGLVDRVDEVKGKAGDALRANLS 240 Query 249 SVVRNRELTDLVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFDTLAAAGGP 308 +V+ NR+LT+LV+DVPL P L ++ WDRD +HRLFDDLEFRVLR+RLF TL+AA P Sbjct 241 AVLLNRQLTELVKDVPLELAPADLAVRQWDRDAVHRLFDDLEFRVLRERLFSTLSAAE-P 299 Query 309 EVDEGFDVRGGALAPGTVRQWLAEHAGDGRRAGLTVVGTHLPHGGDATAMAVAAADGEGA 368 EV+EGF+V GG LAPG V WL EHA DGRR GL+ T GD +A+ ADG GA Sbjct 300 EVEEGFEVSGGVLAPGAVAAWLDEHARDGRRVGLSFTCTWSRGSGDLDGLALVTADGAGA 359 Query 369 YLDTATLTPDDDAALAAWLADPAKPKALHEAKAAVHDLAGRGWTLEGVTSDTALAAYLVR 428 ++D TLT DD+ AL+AWLADPA PKA H+ K +H + RGW L G++SDTALAAYLVR Sbjct 360 FVDARTLTDDDERALSAWLADPAFPKAAHDVKGPLHAVRDRGWKLAGLSSDTALAAYLVR 419 Query 429 PGQRSFTLDDLSLRYLRRELRAETPQQQ-QLSLLDDDD-TDAETIQTTILRARAVIDLAD 486 PGQRSF L DL +RYL+RELRAE + QLSLL+D++ T A + ++RARAV +LAD Sbjct 420 PGQRSFDLPDLVVRYLQRELRAEQGEDDGQLSLLEDEEQTKAGAAASELVRARAVAELAD 479 Query 487 ALDAELARIDSTALLGEMELPVQRVLAKMESAGIAVDLPMLTELQSQFGDQIRDAAEAAY 546 LD ELARIDST LL E+ELP+ +VL+++E+AGIAVD L L + F +++ AA+ AY Sbjct 480 TLDDELARIDSTRLLTELELPLLQVLSELEAAGIAVDADQLAGLGAHFAARVKQAAQDAY 539 Query 547 GVIGKQINLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFDKTGHPFLQHLLAH 606 GVIGK+INLGSPKQLQVVLFDELGMPKTKRTKTGYTTDA+ALQSL++KT HPFLQH+L H Sbjct 540 GVIGKEINLGSPKQLQVVLFDELGMPKTKRTKTGYTTDAEALQSLYEKTEHPFLQHMLEH 599 Query 607 RDVTRLKVTVDGLLQAVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAGRRIRDA 666 RD TRLK TVDGL++++A DGRIHTT NQTIAATGRLSSTEPNLQNIPIRT+ GRRIR+ Sbjct 600 RDATRLKTTVDGLVKSIADDGRIHTTLNQTIAATGRLSSTEPNLQNIPIRTEEGRRIREV 659 Query 667 FVVGDGYAELMTADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFVASRAFGVPIDEVTG 726 FVVG+GY+ELMTADYSQIEMRIMAHLSGDEGLIEAF TGEDLH++VASRAFGVPIDEV Sbjct 660 FVVGEGYSELMTADYSQIEMRIMAHLSGDEGLIEAFRTGEDLHNYVASRAFGVPIDEVDH 719 Query 727 ELRRRVKAMSYGLAYGLSAYGLSQQLKISTEEANEQMDAYFARFGGVRDYLRAVVERARK 786 ELRRRVKAMSYGLAYGLSA+GL+QQL+ISTE+A EQM+AYFARFG VRDYLR VV++ARK Sbjct 720 ELRRRVKAMSYGLAYGLSAFGLAQQLRISTEDAREQMEAYFARFGSVRDYLRDVVDQARK 779 Query 787 DGYTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIQVDKALNEAQ 846 DGYTST+LGRRRYLP+L+S NRQ R+ AER ALNAPIQGSAADIIKVAM+ V +AL Sbjct 780 DGYTSTILGRRRYLPDLNSDNRQRRDMAERMALNAPIQGSAADIIKVAMLDVHEALRP-- 837 Query 847 LASRMLLQVHDELLFEIAPGERERVEALVRDKMGGAYPLDVPLEVSVGYGRSWDAAAH 904 L SRMLLQVHDEL+ E+A GERE VE LVR++MG AY LDVPLEVSVG G SWDAAAH Sbjct 838 LRSRMLLQVHDELIIEVADGEREEVERLVRERMGAAYALDVPLEVSVGVGGSWDAAAH 895 >gi|343927498|ref|ZP_08766969.1| DNA polymerase I [Gordonia alkanivorans NBRC 16433] gi|343762572|dbj|GAA13895.1| DNA polymerase I [Gordonia alkanivorans NBRC 16433] Length=915 Score = 1239 bits (3205), Expect = 0.0, Method: Compositional matrix adjust. Identities = 639/898 (72%), Positives = 732/898 (82%), Gaps = 10/898 (1%) Query 14 KPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLRDEAPTHIAAAFD 73 +P LMLLDG+SLA+RAF+ALPAENFKT G TTNAVYGFT+MLINLLRDE PTHIAAAFD Sbjct 21 QPVLMLLDGHSLAYRAFFALPAENFKTATGQTTNAVYGFTSMLINLLRDEEPTHIAAAFD 80 Query 74 VSRQTFRLQRYPEYKANRSSTPDEFAGQIDITKEVLGALGITVLSEPGFEADDLIATLAT 133 VSR+TFR + +PEYKA RS +PDEF GQ+D+TKEVL ALG+TV++ GFEADD+IATLAT Sbjct 81 VSRKTFRSEMFPEYKAQRSKSPDEFNGQVDLTKEVLDALGVTVMAIEGFEADDIIATLAT 140 Query 134 QAENEGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVVEKYGLTPRQYPDF 193 QA + ++VL+VTGDRD+LQLV TVLYPRKGVS+LTRFTPE V +KYGLTP QYPD+ Sbjct 141 QAREQDFKVLIVTGDRDSLQLVDPSTTVLYPRKGVSDLTRFTPEEVEKKYGLTPAQYPDY 200 Query 194 AALRGDPSDNLPGIPGVGEKTAAKWIAEYGSLRSLVDNVDAVRGKVGDALRANLASVVRN 253 AALRGDPSDNLPGIPGVGEKTA+KWI EYGSL SLVD+VD V+GKVGDALRANLASV N Sbjct 201 AALRGDPSDNLPGIPGVGEKTASKWIREYGSLASLVDHVDEVKGKVGDALRANLASVQTN 260 Query 254 RELTDLVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFDTLAAAGGPEVDEG 313 R+LT+L+RD+ L P+ L + WDRD IH+LFDDLEFRVLRDRLF TL++ PE + G Sbjct 261 RQLTELIRDMQLPAGPEDLAMVGWDRDRIHQLFDDLEFRVLRDRLFSTLSSV-EPEAEAG 319 Query 314 FDVRGGALAPGTVRQWLAEHAGDGRRAGLTVVGTHLPHGGDATAMAVAAADGEGAYLDTA 373 FD+ G L G V WL EHA G R GL V H+ G D T +A+AAADG AY+D Sbjct 320 FDLDGSVLGAGEVAGWLTEHARTG-RTGLAVTAPHVVVGSDPTGLAIAAADGSSAYVDVT 378 Query 374 TLTPDDDAALAAWLADPAKPKALHEAKAAVHDLAGRGWTLEGVTSDTALAAYLVRPGQRS 433 TLTP+DDAALA WLADP KA+HEAK AVH L RGW L+GVTSDT+LAAYLVRPGQR+ Sbjct 379 TLTPEDDAALANWLADPQALKAVHEAKWAVHALRSRGWKLDGVTSDTSLAAYLVRPGQRT 438 Query 434 FTLDDLSLRYLRRELRAET-PQQQQLSLLDDDDTDAETIQTTILRARAVIDLADALDAEL 492 F LDDL+LRYLRRELRA+T Q+SLL DDDT+ + + +L ARAV +LAD LD EL Sbjct 439 FNLDDLALRYLRRELRADTGAGDGQMSLL-DDDTEGKVAEQHMLEARAVQELADTLDTEL 497 Query 493 ARIDSTALLGEMELPVQRVLAKMESAGIAVDLPMLTELQSQFGDQIRDAAEAAYGVIGKQ 552 RIDS LL EMELP+ VLA +E+AGIAVD+ L F D+IR AAE+AY VIG+Q Sbjct 498 DRIDSKPLLTEMELPLSFVLADLEAAGIAVDVDHFNALAQMFNDRIRAAAESAYEVIGEQ 557 Query 553 INLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFDKTGHPFLQHLLAHRDVTRL 612 INLGSPKQLQ VLFD+L MPKTK+TKTGYTTDADALQSL++KT HPFL HLL HRD TRL Sbjct 558 INLGSPKQLQTVLFDKLDMPKTKKTKTGYTTDADALQSLYEKTEHPFLAHLLEHRDATRL 617 Query 613 KVTVDGLLQAVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAGRRIRDAFVVGD- 671 KVTVDGLL++VA DGRIHTTFNQTIAATGRLSSTEPNLQNIP+RT+AGR IR F+VG Sbjct 618 KVTVDGLLKSVADDGRIHTTFNQTIAATGRLSSTEPNLQNIPVRTEAGREIRRGFIVGTD 677 Query 672 -----GYAELMTADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFVASRAFGVPIDEVTG 726 Y LMTADYSQIEMRIMAHLS DEGLIEAFNTGEDLH+FV SRAFGVPIDEVT Sbjct 678 QDSGVNYDCLMTADYSQIEMRIMAHLSEDEGLIEAFNTGEDLHNFVGSRAFGVPIDEVTT 737 Query 727 ELRRRVKAMSYGLAYGLSAYGLSQQLKISTEEANEQMDAYFARFGGVRDYLRAVVERARK 786 E+R RVKAMSYGLAYGLSA+GL+ QLKIS EEA +QM+AYFARFGGVRDYL VV AR+ Sbjct 738 EMRHRVKAMSYGLAYGLSAFGLAAQLKISREEAKDQMEAYFARFGGVRDYLHDVVAEARR 797 Query 787 DGYTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIQVDKALNEAQ 846 + YT+T+ GRRRYLP+L+S N Q R++AER ALNAPIQG+AADIIKVAMI V K + Sbjct 798 NEYTATLFGRRRYLPDLNSDNWQRRQSAERMALNAPIQGTAADIIKVAMINVHKRFLAEK 857 Query 847 LASRMLLQVHDELLFEIAPGERERVEALVRDKMGGAYPLDVPLEVSVGYGRSWDAAAH 904 L SR+LLQVHDEL+ E+A GER+ VEA VR++MG A L VPLEVSVG+GRSWD AAH Sbjct 858 LTSRVLLQVHDELVVEVAAGERDAVEAAVREEMGNAITLSVPLEVSVGFGRSWDDAAH 915 >gi|302528122|ref|ZP_07280464.1| DNA polymerase I [Streptomyces sp. AA4] gi|302437017|gb|EFL08833.1| DNA polymerase I [Streptomyces sp. AA4] Length=912 Score = 1208 bits (3125), Expect = 0.0, Method: Compositional matrix adjust. Identities = 614/894 (69%), Positives = 718/894 (81%), Gaps = 5/894 (0%) Query 14 KPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLRDEAPTHIAAAFD 73 +P L+L+DG+S+A+RAF+ALPAENF+T+ G TNAV+GFT+MLINLLRDE PTH+A AFD Sbjct 21 RPRLLLIDGHSMAYRAFFALPAENFRTKTGQVTNAVFGFTSMLINLLRDEKPTHLAVAFD 80 Query 74 VSRQTFRLQRYPEYKANRSSTPDEFAGQIDITKEVLGALGITVLSEPGFEADDLIATLAT 133 +SR+TFR + Y +YKANRS+TPDEF GQ+D+ KEVL LGI L++ +EADD+IATL T Sbjct 81 LSRKTFRSETYADYKANRSTTPDEFRGQVDLVKEVLDVLGIPSLTKENYEADDVIATLTT 140 Query 134 QAENEGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVVEKYGLTPRQYPDF 193 QA E Y VL+ TGDRDALQLV+D VTVLYP++GVS+L RFTPEAV EKYGLTP QYPDF Sbjct 141 QA-GEDYDVLICTGDRDALQLVTDRVTVLYPKRGVSDLVRFTPEAVEEKYGLTPTQYPDF 199 Query 194 AALRGDPSDNLPGIPGVGEKTAAKWIAEYGSLRSLVDNVDAVRGKVGDALRANLASVVRN 253 AALRGDPSDNLPGIPGVGEKTAAKWI ++GSL L+D VD V+GKVGDALR +L+SV N Sbjct 200 AALRGDPSDNLPGIPGVGEKTAAKWIRQFGSLADLIDRVDEVKGKVGDALREHLSSVQLN 259 Query 254 RELTDLVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFDTLAAAGGPEVDEG 313 R+LT+LVRDVPL PD L L+PW+R+ +HRLFD+LEFRVLRDRLF+TL++A PE D G Sbjct 260 RQLTELVRDVPLESVPDQLELRPWNREAVHRLFDELEFRVLRDRLFETLSSAE-PEADSG 318 Query 314 FDVRGGALAPGTVRQWLAEHAGDGRRAGLTVVGTHLPHGGDATAMAVAAADGEGAYLDTA 373 F+V G ALAPG + WL HAG G L+ T D A+A A ADGEGAY+D Sbjct 319 FEVSGSALAPGALGAWLEAHAGAGEPVALSFRATGSSVRSDLKAVAFATADGEGAYVDVT 378 Query 374 TLTPDDDAALAAWLADPAKPKALHEAKAAVHDLAGRGWTLEGVTSDTALAAYLVRPGQRS 433 + DD AL+AWLADP K H+ K +H + RGWT G+ DTALAAYL RPGQR+ Sbjct 379 AMDEADDRALSAWLADPEIRKIGHDLKVPLHAVRARGWTFGGLNMDTALAAYLARPGQRT 438 Query 434 FTLDDLSLRYLRRELRAETPQQQ-QLSLLDD--DDTDAETIQTTILRARAVIDLADALDA 490 F LDDL+LRYL RELR+E QLSLLD D+ + + I +++ARA+ +LA AL A Sbjct 439 FGLDDLALRYLHRELRSEAGDGDGQLSLLDGGADELEQKEISAELVKARAIFELAGALAA 498 Query 491 ELARIDSTALLGEMELPVQRVLAKMESAGIAVDLPMLTELQSQFGDQIRDAAEAAYGVIG 550 EL + LL E+ELP+ V+ ++E+AGIAVD LTEL++ + ++ AAE+AY VIG Sbjct 499 ELEELGGAKLLAELELPLLEVITELEAAGIAVDTDQLTELEAHYLSRVTQAAESAYEVIG 558 Query 551 KQINLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFDKTGHPFLQHLLAHRDVT 610 KQINLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLF+KT HPFLQHLL HRD T Sbjct 559 KQINLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFEKTEHPFLQHLLEHRDAT 618 Query 611 RLKVTVDGLLQAVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAGRRIRDAFVVG 670 RL+ TV+GL+++VA DGRIHTT QTIAATGRLSS EPNLQNIP+RT+ GRRIRDAFVVG Sbjct 619 RLRTTVEGLIKSVADDGRIHTTLQQTIAATGRLSSIEPNLQNIPVRTEEGRRIRDAFVVG 678 Query 671 DGYAELMTADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFVASRAFGVPIDEVTGELRR 730 DGYAELMTADYSQIEMRIMAHLS DEGLIEAFN+GEDLH+FVASRAF VP E+T E R Sbjct 679 DGYAELMTADYSQIEMRIMAHLSKDEGLIEAFNSGEDLHTFVASRAFSVPAAEITPEQRY 738 Query 731 RVKAMSYGLAYGLSAYGLSQQLKISTEEANEQMDAYFARFGGVRDYLRAVVERARKDGYT 790 RVKAMSYGLAYGLSAYGLSQQLKISTE+A EQM+AYF+RFGGVRDYL++VV A K GYT Sbjct 739 RVKAMSYGLAYGLSAYGLSQQLKISTEDAKEQMEAYFSRFGGVRDYLQSVVGEAAKCGYT 798 Query 791 STVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIQVDKALNEAQLASR 850 T+ GRRRYLP+L+S NRQ RE AER ALNAPIQGSAADIIKVAM+ V +AL EA SR Sbjct 799 ETIFGRRRYLPDLNSDNRQRREMAERMALNAPIQGSAADIIKVAMLNVHRALAEAGARSR 858 Query 851 MLLQVHDELLFEIAPGERERVEALVRDKMGGAYPLDVPLEVSVGYGRSWDAAAH 904 +LLQVHDEL+ EIA GER VE LVR+ MG A L VPLEVSVGYGRSW+ AAH Sbjct 859 VLLQVHDELVLEIADGERSDVEKLVREGMGSAAELAVPLEVSVGYGRSWNEAAH 912 >gi|257056582|ref|YP_003134414.1| DNA polymerase I [Saccharomonospora viridis DSM 43017] gi|256586454|gb|ACU97587.1| DNA polymerase I [Saccharomonospora viridis DSM 43017] Length=901 Score = 1197 bits (3096), Expect = 0.0, Method: Compositional matrix adjust. Identities = 596/891 (67%), Positives = 718/891 (81%), Gaps = 4/891 (0%) Query 15 PTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLRDEAPTHIAAAFDV 74 P L+L+DG+S+A+RAF+A+PA+ F+T G TNAV+GFT+MLINLLRDEAPTH+A AFDV Sbjct 14 PRLLLIDGHSMAYRAFFAVPADRFRTSTGQVTNAVFGFTSMLINLLRDEAPTHVAVAFDV 73 Query 75 SRQTFRLQRYPEYKANRSSTPDEFAGQIDITKEVLGALGITVLSEPGFEADDLIATLATQ 134 SR+TFR + + +YKANR +TPD+F GQ+++ K+VLGAL I VL+ G+EADD+IATL + Sbjct 74 SRKTFRSETFADYKANRLATPDDFKGQVELIKDVLGALSIPVLAVEGYEADDVIATLTAK 133 Query 135 AENEGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVVEKYGLTPRQYPDFA 194 A ++ Y VL+ TGDRDALQLV+D VTVLYPRKGVS+L RF PE V EKYGL+P QYPDFA Sbjct 134 AGDD-YEVLICTGDRDALQLVTDSVTVLYPRKGVSDLVRFDPEGVQEKYGLSPAQYPDFA 192 Query 195 ALRGDPSDNLPGIPGVGEKTAAKWIAEYGSLRSLVDNVDAVRGKVGDALRANLASVVRNR 254 ALRGDPSDNLPGIPGVGEKTAAKWI ++GSL L+D VD V+GKVG+ALR++L SV+ NR Sbjct 193 ALRGDPSDNLPGIPGVGEKTAAKWIRQFGSLGELIDRVDEVKGKVGEALRSHLDSVMLNR 252 Query 255 ELTDLVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFDTLAAAGGPEVDEGF 314 +LT+LVRDVPL TPD L L+PWDRD +HRLFD+LEFRVLRDRLF +L++ PE D GF Sbjct 253 QLTELVRDVPLEVTPDDLALKPWDRDAVHRLFDELEFRVLRDRLFASLSSTE-PEADSGF 311 Query 315 DVRGGALAPGTVRQWLAEHAGDGRRAGLTVVGTHLPHGGDATAMAVAAADGEGAYLDTAT 374 +V G AL PGTV +WL++HA G GL T D ++A+AA +GEGAYLD T Sbjct 312 EVEGAALQPGTVGEWLSQHASGGTTVGLAFSVTGASVTSDVQSVALAAPNGEGAYLDVTT 371 Query 375 LTPDDDAALAAWLADPAKPKALHEAKAAVHDLAGRGWTLEGVTSDTALAAYLVRPGQRSF 434 LT DD+ AL WLAD K H K A+H L RGW L G+ DT LAAYLVRPGQRSF Sbjct 372 LTEDDERALGEWLADENIHKVGHSLKKALHGLRSRGWRLAGLVMDTELAAYLVRPGQRSF 431 Query 435 TLDDLSLRYLRRELRAETPQQQ-QLSLLDDDDTDAETIQTTILRARAVIDLADALDAELA 493 LDDL LRYL +ELR+E + QLSLLD D +D E ++ ++RARAV++L+ AL AELA Sbjct 432 KLDDLVLRYLGKELRSEGVEGDGQLSLLDTD-SDNEIVRRELVRARAVLELSSALSAELA 490 Query 494 RIDSTALLGEMELPVQRVLAKMESAGIAVDLPMLTELQSQFGDQIRDAAEAAYGVIGKQI 553 I +T LL ++ELP+ ++ +E+AGIAVD+ +LTEL++ + ++++ A E AY VIGKQI Sbjct 491 AIGATTLLADIELPLLSMITDLEAAGIAVDIDVLTELEAHYANRVKQATEQAYSVIGKQI 550 Query 554 NLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFDKTGHPFLQHLLAHRDVTRLK 613 NLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADALQ+L++KT HPFLQ+LL HRD T+L+ Sbjct 551 NLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADALQTLYEKTEHPFLQYLLEHRDATKLR 610 Query 614 VTVDGLLQAVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAGRRIRDAFVVGDGY 673 TV+GL++AVA DGRIHTT +QTI ATGRLSS +PNLQNIP+RTD GRRIR+AFVVG+GY Sbjct 611 STVEGLIKAVADDGRIHTTLHQTITATGRLSSVDPNLQNIPVRTDEGRRIREAFVVGEGY 670 Query 674 AELMTADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFVASRAFGVPIDEVTGELRRRVK 733 AELMTADYSQIEMRIMAHLS DE LIEAF++G D H+ A+R F V EVTGE R ++K Sbjct 671 AELMTADYSQIEMRIMAHLSNDEALIEAFHSGFDFHAATAARVFDVDPTEVTGEQRAKIK 730 Query 734 AMSYGLAYGLSAYGLSQQLKISTEEANEQMDAYFARFGGVRDYLRAVVERARKDGYTSTV 793 AM+YGLAYGLSAYGLSQQL+ISTEEA MD YF RFGGVRDYL +VVERA K+GYT T+ Sbjct 731 AMNYGLAYGLSAYGLSQQLRISTEEARALMDEYFLRFGGVRDYLHSVVERAAKEGYTETI 790 Query 794 LGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIQVDKALNEAQLASRMLL 853 GRRRYLP+L S+NRQ RE AER ALNAPIQGSAADIIKVAM+ V +AL EA L SR+LL Sbjct 791 FGRRRYLPDLTSTNRQRREMAERMALNAPIQGSAADIIKVAMLGVHRALAEAGLRSRVLL 850 Query 854 QVHDELLFEIAPGERERVEALVRDKMGGAYPLDVPLEVSVGYGRSWDAAAH 904 QVHDEL+ E+A GE +VE LVR +MG AY L VPLEVSVGYGRSW+ AAH Sbjct 851 QVHDELMLEVADGEHAQVEELVRREMGSAYELSVPLEVSVGYGRSWNDAAH 901 >gi|296140146|ref|YP_003647389.1| DNA polymerase I [Tsukamurella paurometabola DSM 20162] gi|296028280|gb|ADG79050.1| DNA polymerase I [Tsukamurella paurometabola DSM 20162] Length=917 Score = 1195 bits (3092), Expect = 0.0, Method: Compositional matrix adjust. Identities = 619/902 (69%), Positives = 741/902 (83%), Gaps = 6/902 (0%) Query 8 PSEDRAKPTLMLLDGNSLAFRAFYALPAEN--FKTRGGLTTNAVYGFTAMLINLLRDEAP 65 PSE +P ++L+DG+S+AFRAF+ALP + F+T+ G TNAVYGFT+MLI LL++EAP Sbjct 17 PSEVGKRPVMLLIDGHSMAFRAFFALPLDGGRFRTKSGQPTNAVYGFTSMLIKLLKEEAP 76 Query 66 THIAAAFDVSRQTFRLQRYPEYKANRSSTPDEFAGQIDITKEVLGALGITVLSEPGFEAD 125 ++AAAFDVSRQTFR + YPEYKA RSS PD+F GQ+D+ K+VL A+GI +++ G+EAD Sbjct 77 GYVAAAFDVSRQTFRAEMYPEYKAQRSSAPDDFRGQVDVVKDVLAAMGIPTMAQEGYEAD 136 Query 126 DLIATLATQAENEGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVVEKYGL 185 D+IAT+ T+A+ +G+ VL+VTGDRDALQLV++ VTVLYPRKGVS+LTRFTPE V KYGL Sbjct 137 DIIATMTTRAQEQGFDVLIVTGDRDALQLVNEHVTVLYPRKGVSDLTRFTPEEVDAKYGL 196 Query 186 TPRQYPDFAALRGDPSDNLPGIPGVGEKTAAKWIAEYGSLRSLVDNVDAVRGKVGDALRA 245 TP QYPD+AALRGDPSDNLPGIPGVGEKTAAKWI EYGSL LV+NVD V+GKVGD+LR Sbjct 197 TPSQYPDYAALRGDPSDNLPGIPGVGEKTAAKWIREYGSLEGLVENVDKVKGKVGDSLRE 256 Query 246 NLASVVRNRELTDLVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFDTLAAA 305 NLA+V NR++T++V+D+ L P L LQPW+R+ IH+LFDDLEFRVLRDR+F LA++ Sbjct 257 NLATVQLNRQITEMVKDMALPYEPQDLALQPWNREAIHQLFDDLEFRVLRDRIFTELASS 316 Query 306 GGPEVDEGFDVRGGALAPGTVRQWLAEHAGDGRRAGLTVVGTHLPHGGDATAMAVAAADG 365 PE +EGF++ GG +APGTV +WLAEHA G R+GL VVG + GDA A+ +AA D Sbjct 317 E-PEAEEGFEISGGIVAPGTVAEWLAEHASSGERSGLGVVGPDVVVDGDAEAVVIAAPDD 375 Query 366 EGAYLDTATLTPDDDAALAAWLADPAKPKALHEAKAAVHDLAGRGWTLEGVTSDTALAAY 425 EG Y+ TLTP D+AAL AWLAD +PKA+HEAK A+H L RGW L G+TSDTA+AAY Sbjct 376 EGGYIALETLTPHDEAALGAWLADATRPKAVHEAKWAMHGLESRGWELGGLTSDTAIAAY 435 Query 426 LVRPGQRSFTLDDLSLRYLRRELRAETP--QQQQLSLLDD-DDTDAETIQTTILRARAVI 482 LVRPGQRSF LDDLS+RYL RELR E+ QLSLLDD DD+ AE Q ILRARAV+ Sbjct 436 LVRPGQRSFNLDDLSVRYLHRELRVESAAGDDTQLSLLDDPDDSAAEKAQQQILRARAVV 495 Query 483 DLADALDAELARIDSTALLGEMELPVQRVLAKMESAGIAVDLPMLTELQSQFGDQIRDAA 542 DLA ALD EL +I+S LL EMELP+ RVL ME+ GIAVD L L S F D+IR A Sbjct 496 DLAAALDEELEKIESKPLLEEMELPLLRVLGVMEATGIAVDTDHLESLHSDFSDRIRAAE 555 Query 543 EAAYGVIGKQINLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFDKTGHPFLQH 602 AA+ IG+QINLGSPKQLQV+LF++LG+PKTK+TKTGYTTDA AL++L++K HPFLQ+ Sbjct 556 AAAFEEIGEQINLGSPKQLQVILFEKLGLPKTKKTKTGYTTDAAALEALYEKEPHPFLQY 615 Query 603 LLAHRDVTRLKVTVDGLLQAVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAGRR 662 LL HRD TRLKVTV+GLL+AVA+DGRIH+TFNQT+AATGRLSST+PNLQNIP+RT+AGR+ Sbjct 616 LLEHRDATRLKVTVEGLLKAVASDGRIHSTFNQTVAATGRLSSTDPNLQNIPVRTEAGRQ 675 Query 663 IRDAFVVGDGYAELMTADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFVASRAFGVPID 722 IR AFV G+GY LMTADYSQIEMRIMAHLS DEGLIEAFNTGEDLH+FV ++AFGVPID Sbjct 676 IRHAFVAGEGYETLMTADYSQIEMRIMAHLSSDEGLIEAFNTGEDLHNFVGAKAFGVPID 735 Query 723 EVTGELRRRVKAMSYGLAYGLSAYGLSQQLKISTEEANEQMDAYFARFGGVRDYLRAVVE 782 EVT ++RRRVKAMSYGLAYGLSA+GL+ QLKIS +EA +QM+AYFARFGGVRDYL+ VV Sbjct 736 EVTPDMRRRVKAMSYGLAYGLSAFGLAAQLKISRDEAKDQMEAYFARFGGVRDYLQDVVT 795 Query 783 RARKDGYTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIQVDKAL 842 A ++ YT T+ GRRRYLP+L S+NR RE+AER ALNAPIQGSAADIIKVAMI +DK + Sbjct 796 EATRNEYTETIFGRRRYLPDLTSTNRMRRESAERMALNAPIQGSAADIIKVAMINLDKQI 855 Query 843 NEAQLASRMLLQVHDELLFEIAPGERERVEALVRDKMGGAYPLDVPLEVSVGYGRSWDAA 902 A L SRMLLQVHDEL+ E+A GER+ +E LVRD MG A L VPLEVSVGYGRSWD A Sbjct 856 RAAGLTSRMLLQVHDELVLEVAAGERDELEKLVRDTMGTAAELSVPLEVSVGYGRSWDDA 915 Query 903 AH 904 AH Sbjct 916 AH 917 >gi|326382644|ref|ZP_08204335.1| DNA polymerase I [Gordonia neofelifaecis NRRL B-59395] gi|326198763|gb|EGD55946.1| DNA polymerase I [Gordonia neofelifaecis NRRL B-59395] Length=897 Score = 1189 bits (3077), Expect = 0.0, Method: Compositional matrix adjust. Identities = 621/899 (70%), Positives = 726/899 (81%), Gaps = 14/899 (1%) Query 18 MLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLRDEAPTHIAAAFDVSRQ 77 MLLDG+SLA+RAF+ALPAENFKT G +TNAVYGFT+MLINLLRDE PTHIAAAFDVSRQ Sbjct 1 MLLDGHSLAYRAFFALPAENFKTNTGQSTNAVYGFTSMLINLLRDEEPTHIAAAFDVSRQ 60 Query 78 TFRLQRYPEYKANRSSTPDEFAGQIDITKEVLGALGITVLSEPGFEADDLIATLATQAEN 137 TFR +PEYKA RS +PDEF GQ+D+TKEVL A+GI V++ G+EADD+IATLAT A+ Sbjct 61 TFRSDMFPEYKAQRSKSPDEFRGQVDLTKEVLDAMGIPVMAIDGYEADDIIATLATAADQ 120 Query 138 EGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVVEKYGLTPRQYPDFAALR 197 +GYRV VVTGDRD+LQLV++++TVLYP++GVSE+TRFTP+ V +KYGLTP QYPDFAALR Sbjct 121 QGYRVFVVTGDRDSLQLVNENITVLYPKRGVSEMTRFTPDEVEKKYGLTPAQYPDFAALR 180 Query 198 GDPSDNLPGIPGVGEKTAAKWIAEYGSLRSLVDNVDAVRGKVGDALRANLASVVRNRELT 257 GDPSDNLPGIPGVGEKTAAKWI EYGS LV+ D VRGKVGD+LRANLA V+ NR LT Sbjct 181 GDPSDNLPGIPGVGEKTAAKWIREYGSFEELVNRADEVRGKVGDSLRANLAGVIMNRRLT 240 Query 258 DLVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFDTLAAAGGPEVDEGFDVR 317 +LVRD+ L PD L L WDRD IH+LFDDLEF+VLRDRLF TL + PE + GFD+ Sbjct 241 ELVRDMQLPAGPDELELHGWDRDRIHQLFDDLEFKVLRDRLFSTLTSV-EPEAESGFDLS 299 Query 318 GGALAPGTVRQWLAEHAGDGRRAGLTVVGTHLPHGGDATAMAVAAADGEGAYLDTATLTP 377 G L G V WL+ H G R+GL V G + G D ++A+AAADGE A++D L+ Sbjct 300 GTRLGAGEVAGWLSAHTASG-RSGLAVTGPRVVVGSDVESLAIAAADGEAAFVDPTALSV 358 Query 378 DDDAALAAWLADPAKPKALHEAKAAVHDLAGRGWTLEGVTSDTALAAYLVRPGQRSFTLD 437 +DDAALA WLAD ++PKA+HE K A+H L GRGWTL GVTSDTALAAYLVRPGQR+F LD Sbjct 359 EDDAALADWLADESRPKAVHEVKWALHALRGRGWTLTGVTSDTALAAYLVRPGQRTFNLD 418 Query 438 DLSLRYLRRELRAE--TPQQQQLSLLDDDDTDAETIQTTILRARAVIDLADALDAELARI 495 DL+LRYLRREL+AE QLSLLDDD +L A+AV +LAD LD EL RI Sbjct 419 DLALRYLRRELKAEDGAGDDGQLSLLDDDADAQRAADQLMLSAQAVAELADTLDTELERI 478 Query 496 DSTALLGEMELPVQRVLAKMESAGIAVDLPMLTELQSQFGDQIRDAAEAAYGVIGKQINL 555 DS+ALL EMELP+ VLA +E+AGIAVD+ L L+ QF ++RDAAE+AY VIG+Q+NL Sbjct 479 DSSALLQEMELPLSFVLADLEAAGIAVDVDHLDSLEGQFAQRVRDAAESAYEVIGEQVNL 538 Query 556 GSPKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFDKTGHPFLQHLLAHRDVTRLKVT 615 GSPKQLQ +LFD+L MPKTK+TKTGYTTDADAL SL++KT HPFL+HLL HRD TRL+VT Sbjct 539 GSPKQLQAILFDKLDMPKTKKTKTGYTTDADALTSLYEKTEHPFLKHLLEHRDATRLRVT 598 Query 616 VDGLLQAVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAGRRIRDAFVVGDG--- 672 V+GL + VA D RIHTTFNQT+AATGRLSST+PNLQNIP+RT+AGR+IR AFVV G Sbjct 599 VEGLQKTVADDQRIHTTFNQTVAATGRLSSTDPNLQNIPVRTEAGRQIRHAFVVAPGPVA 658 Query 673 -------YAELMTADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFVASRAFGVPIDEVT 725 + LMTADYSQIEMRIMAHLS DEGLIEAFNTGEDLH+FV SRAFGVP+D+V Sbjct 659 VGSGNIEFESLMTADYSQIEMRIMAHLSEDEGLIEAFNTGEDLHNFVGSRAFGVPVDQVD 718 Query 726 GELRRRVKAMSYGLAYGLSAYGLSQQLKISTEEANEQMDAYFARFGGVRDYLRAVVERAR 785 ++R RVKAMSYGLAYGLSAYGL+ QL IS EEA +QM+AYF RFGGVRDYL VVE AR Sbjct 719 PQMRSRVKAMSYGLAYGLSAYGLAAQLGISREEAKQQMEAYFDRFGGVRDYLHRVVEEAR 778 Query 786 KDGYTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIQVDKALNEA 845 ++ YT+T+ GRRRYLP+L+S N Q R++AER ALNAPIQG+AADIIKVAMI V K L Sbjct 779 RNEYTATLFGRRRYLPDLNSDNFQRRQSAERMALNAPIQGTAADIIKVAMINVQKRLRTE 838 Query 846 QLASRMLLQVHDELLFEIAPGERERVEALVRDKMGGAYPLDVPLEVSVGYGRSWDAAAH 904 QL+SRMLLQVHDEL+ E+A GE+ VEALVR++MGGA L VPLEVSVGYGRSWD AAH Sbjct 839 QLSSRMLLQVHDELVIEVATGEQAAVEALVREEMGGAIDLSVPLEVSVGYGRSWDDAAH 897 >gi|340529562|gb|AEK44767.1| DNA polymerase I [Amycolatopsis mediterranei S699] Length=913 Score = 1178 bits (3047), Expect = 0.0, Method: Compositional matrix adjust. Identities = 611/896 (69%), Positives = 726/896 (82%), Gaps = 8/896 (0%) Query 14 KPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLRDEAPTHIAAAFD 73 +P L+L+DG+S+A+RAF+ALPAENFKT+ G TNAV+GFT+MLINLLRDEAPTH+A AFD Sbjct 21 RPKLLLIDGHSMAYRAFFALPAENFKTKTGQVTNAVFGFTSMLINLLRDEAPTHLAVAFD 80 Query 74 VSRQTFRLQRYPEYKANRSSTPDEFAGQIDITKEVLGALGITVLSEPGFEADDLIATLAT 133 +SR+TFR + + +YKANRS+TPDEF GQ+D+ KEVL LGI L + FEADD+IATL T Sbjct 81 LSRKTFRSETFADYKANRSTTPDEFRGQVDLVKEVLDVLGIPSLVKENFEADDIIATLTT 140 Query 134 QAENEGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVVEKYGLTPRQYPDF 193 QA +G+ VL+ TGDRDALQLV++ VTVLYP++GVSE+TRFTP+AV EKYGLTPRQYPDF Sbjct 141 QATADGFDVLICTGDRDALQLVTEHVTVLYPKRGVSEMTRFTPDAVEEKYGLTPRQYPDF 200 Query 194 AALRGDPSDNLPGIPGVGEKTAAKWIAEYGSLRSLVDNVDAVRGKVGDALRANLASVVRN 253 AALRGDPSDNLP IPGVGEKTAAKWI ++GSL L+D VD V+GKVGDALRA+L+SV N Sbjct 201 AALRGDPSDNLPSIPGVGEKTAAKWIKQFGSLDDLIDRVDEVKGKVGDALRAHLSSVQLN 260 Query 254 RELTDLVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFDTLAAAGGPEVDEG 313 R+LT+L+RDV L P L L+PWDR+ +H LFD+LEFRVLRDRLF TL +A PE DEG Sbjct 261 RQLTELIRDVELEIAPSGLELRPWDREAVHALFDELEFRVLRDRLFATLQSAE-PEADEG 319 Query 314 FDVRGGALAPGTVRQWLAEHAGDGRRAGLTV--VGTHLPHGGDATAMAVAAADGEGAYLD 371 F+V G ALAPG + WL HA G L+ VGT + D A+A A ADGEGAY+D Sbjct 320 FEVSGSALAPGALGAWLTAHASAGEPVALSFRAVGTSVR--SDLRAIAFATADGEGAYVD 377 Query 372 TATLTPDDDAALAAWLADPAKPKALHEAKAAVHDLAGRGWTLEGVTSDTALAAYLVRPGQ 431 + DDAALAAWLADPA K H+ K +H + RGW L G+ DTALAAYLVRPGQ Sbjct 378 VTAMDQADDAALAAWLADPAIRKTGHDLKTPLHAIRARGWVLSGLAMDTALAAYLVRPGQ 437 Query 432 RSFTLDDLSLRYLRRELRAETPQQQ-QLSLLDD--DDTDAETIQTTILRARAVIDLADAL 488 R+F LDDL+LRYL RELR+ET QLSLLD + + + IQ +++ARA+ +LA AL Sbjct 438 RTFELDDLALRYLHRELRSETDGGDGQLSLLDGGAEGLEQKEIQDELVKARAIFELAGAL 497 Query 489 DAELARIDSTALLGEMELPVQRVLAKMESAGIAVDLPMLTELQSQFGDQIRDAAEAAYGV 548 + EL +I LL E+ELP+ V+ ++E AG+AVDL LT L++ + ++ AAE AY V Sbjct 498 EKELEQIGGAKLLAELELPLLEVITELEIAGVAVDLEQLTTLEAHYLSRVTQAAEEAYAV 557 Query 549 IGKQINLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFDKTGHPFLQHLLAHRD 608 IGKQINLGSPKQLQVVLFDELGMPKTKRTKTGYTTDA+ALQ LF+KT HPFLQH+L HRD Sbjct 558 IGKQINLGSPKQLQVVLFDELGMPKTKRTKTGYTTDAEALQGLFEKTEHPFLQHMLEHRD 617 Query 609 VTRLKVTVDGLLQAVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAGRRIRDAFV 668 T+L+ TV+GL+++VA DGRIHTT QTIAATGRLSSTEPNLQNIP+RT+ GRRIRDAFV Sbjct 618 ATKLRTTVEGLIKSVADDGRIHTTLLQTIAATGRLSSTEPNLQNIPVRTEEGRRIRDAFV 677 Query 669 VGDGYAELMTADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFVASRAFGVPIDEVTGEL 728 VG+G+ ELMTADYSQIEMRIMAHLS DEGLIEAFN+GEDLH+FVASRAF +P +E+T EL Sbjct 678 VGEGFTELMTADYSQIEMRIMAHLSQDEGLIEAFNSGEDLHTFVASRAFSMPPEEITPEL 737 Query 729 RRRVKAMSYGLAYGLSAYGLSQQLKISTEEANEQMDAYFARFGGVRDYLRAVVERARKDG 788 R RVKAMSYGLAYGLSAYGLSQQL+ISTE+A QM+AYF RFGGVRDYL +VV A K+G Sbjct 738 RYRVKAMSYGLAYGLSAYGLSQQLRISTEDAKSQMEAYFDRFGGVRDYLHSVVGVAAKNG 797 Query 789 YTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIQVDKALNEAQLA 848 YT TV GRRRYLP+L+S NRQ RE AER ALNAPIQGSAADIIKVAM+ V +AL EA+L Sbjct 798 YTETVFGRRRYLPDLNSDNRQRREMAERMALNAPIQGSAADIIKVAMLNVHRALVEAKLK 857 Query 849 SRMLLQVHDELLFEIAPGERERVEALVRDKMGGAYPLDVPLEVSVGYGRSWDAAAH 904 SR+LLQVHDEL+ E+A GE+E++E LVR+ MG AY L VPLEVSVGYGRSW+ AAH Sbjct 858 SRILLQVHDELVLEVAEGEKEQLEQLVREGMGSAYALAVPLEVSVGYGRSWNEAAH 913 >gi|331697374|ref|YP_004333613.1| DNA polymerase I [Pseudonocardia dioxanivorans CB1190] gi|326952063|gb|AEA25760.1| DNA polymerase I [Pseudonocardia dioxanivorans CB1190] Length=939 Score = 1172 bits (3031), Expect = 0.0, Method: Compositional matrix adjust. Identities = 604/908 (67%), Positives = 713/908 (79%), Gaps = 24/908 (2%) Query 17 LMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLRDEAPTHIAAAFDVSR 76 L+LLDG+SLA+RAF+ALPAENF+T G TTNAVYGFT+MLINLLRDE PTH+A AFDVSR Sbjct 36 LLLLDGHSLAYRAFFALPAENFRTGTGQTTNAVYGFTSMLINLLRDEQPTHLAVAFDVSR 95 Query 77 QTFRLQRYPEYKANRSSTPDEFAGQIDITKEVLGALGITVLSEPGFEADDLIATLATQAE 136 +TFR +RY +YKANR++TPD+F GQ+D+ KEVLGAL I V + G+EADD+IATL TQAE Sbjct 96 RTFRSERYADYKANRTTTPDDFRGQVDLIKEVLGALNIPVFAVEGYEADDIIATLTTQAE 155 Query 137 NEGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVVEKYGLTPRQYPDFAAL 196 +G++VL+ TGDRDA QLV+++VTVLYP++GVS+L R P V +YGLTP QYPDFAAL Sbjct 156 ADGFQVLITTGDRDAFQLVTENVTVLYPKRGVSDLGRIDPAEVDNRYGLTPEQYPDFAAL 215 Query 197 RGDPSDNLPGIPGVGEKTAAKWIAEYGSLRSLVDNVDAVRGKVGDALRANLASVVRNREL 256 RGDPSDNLP IPGVGEKTAAKW+ E+GSL L D VD V+GK GDALRANLA+V+ NR+L Sbjct 216 RGDPSDNLPSIPGVGEKTAAKWVREFGSLAELTDRVDEVKGKAGDALRANLANVLLNRQL 275 Query 257 TDLVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFDTLAAAGGPEVDEGFDV 316 T+LVRDV L +P L ++PWDRD +HRLFD+LEFRVLR+RLF TL +A PE + GF+V Sbjct 276 TELVRDVTLDASPADLEVRPWDRDAVHRLFDELEFRVLRERLFSTLQSAE-PEAESGFEV 334 Query 317 RGGALAPGTVRQWLAEHAGDGRRAGLTVVGTHLPHGG----DATAMAVAA--------AD 364 +G +APG+VR WL +A DGRR G+ G GG D T +A+AA AD Sbjct 335 QGTVVAPGSVRAWLDANARDGRRVGVAFSGVT---GGITERDFTGIALAAGEPSVEARAD 391 Query 365 GE------GAYLDTATLTPDDDAALAAWLADPAKPKALHEAKAAVHDLAGRGWTLEGVTS 418 G YLD LTPDD+AAL WLADPA PKA H+ KA +H L GRGWTL G+TS Sbjct 392 GALAGVPVAGYLDVRGLTPDDEAALGEWLADPAVPKASHDVKAVLHALRGRGWTLAGLTS 451 Query 419 DTALAAYLVRPGQRSFTLDDLSLRYLRRELRAE-TPQQQQLSLLD-DDDTDAETIQTTIL 476 DTALAAYL +PGQRSF L DL+LRYLRREL E P QLSLL +++ D ++ Sbjct 452 DTALAAYLAKPGQRSFDLADLALRYLRRELAMEGAPADGQLSLLGGEEEADRAHADAEMV 511 Query 477 RARAVIDLADALDAELARIDSTALLGEMELPVQRVLAKMESAGIAVDLPMLTELQSQFGD 536 A AV +LADAL AELA + LL E+E P+ VLA +E+AGIAVD L L+++F Sbjct 512 AASAVAELADALGAELAEKEQNGLLLELEQPLAFVLADLEAAGIAVDRANLESLEAEFAG 571 Query 537 QIRDAAEAAYGVIGKQINLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFDKTG 596 Q+ AA+ AY VIGK+INLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADAL LF++TG Sbjct 572 QVAQAAQDAYAVIGKEINLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADALAGLFEQTG 631 Query 597 HPFLQHLLAHRDVTRLKVTVDGLLQAVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIR 656 H FLQHLL HRD TRLKVTVDGLL+++AADGRIHTT++QTIAATGRLSSTEPNLQN+PIR Sbjct 632 HEFLQHLLLHRDATRLKVTVDGLLKSIAADGRIHTTYSQTIAATGRLSSTEPNLQNVPIR 691 Query 657 TDAGRRIRDAFVVGDGYAELMTADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFVASRA 716 T AGRRIR AFVVGDG+++LMTADYSQIEMRIMAHLS D LIEAF + D HS AS+ Sbjct 692 TAAGRRIRTAFVVGDGFSQLMTADYSQIEMRIMAHLSEDAALIEAFRSQRDFHSETASKV 751 Query 717 FGVPIDEVTGELRRRVKAMSYGLAYGLSAYGLSQQLKISTEEANEQMDAYFARFGGVRDY 776 FGV +V+ E R ++KAM+YGLAYGLSA+GLS QL+ISTEEA MD YF FGGVRDY Sbjct 752 FGVDAADVSPEQRAKIKAMNYGLAYGLSAFGLSGQLRISTEEARGLMDDYFETFGGVRDY 811 Query 777 LRAVVERARKDGYTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMI 836 LR++V+ ARKDGYT+T+LGRRRYLP+L S NRQ RE AER ALNAPIQGSAADIIKVAM+ Sbjct 812 LRSIVDVARKDGYTATMLGRRRYLPDLTSDNRQRREMAERMALNAPIQGSAADIIKVAML 871 Query 837 QVDKALNEAQLASRMLLQVHDELLFEIAPGERERVEALVRDKMGGAYPLDVPLEVSVGYG 896 +V AL L SRMLLQVHDEL+ E+A GER+ V+ALVR +M A+ L VPLEVSVGYG Sbjct 872 RVHAALQAEGLRSRMLLQVHDELVLEVADGERDAVDALVRREMAAAHELSVPLEVSVGYG 931 Query 897 RSWDAAAH 904 SWDAAAH Sbjct 932 ASWDAAAH 939 >gi|300787986|ref|YP_003768277.1| DNA polymerase I [Amycolatopsis mediterranei U32] gi|299797500|gb|ADJ47875.1| DNA polymerase I [Amycolatopsis mediterranei U32] Length=882 Score = 1163 bits (3008), Expect = 0.0, Method: Compositional matrix adjust. Identities = 605/885 (69%), Positives = 716/885 (81%), Gaps = 8/885 (0%) Query 25 LAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLRDEAPTHIAAAFDVSRQTFRLQRY 84 +A+RAF+ALPAENFKT+ G TNAV+GFT+MLINLLRDEAPTH+A AFD+SR+TFR + + Sbjct 1 MAYRAFFALPAENFKTKTGQVTNAVFGFTSMLINLLRDEAPTHLAVAFDLSRKTFRSETF 60 Query 85 PEYKANRSSTPDEFAGQIDITKEVLGALGITVLSEPGFEADDLIATLATQAENEGYRVLV 144 +YKANRS+TPDEF GQ+D+ KEVL LGI L + FEADD+IATL TQA +G+ VL+ Sbjct 61 ADYKANRSTTPDEFRGQVDLVKEVLDVLGIPSLVKENFEADDIIATLTTQATADGFDVLI 120 Query 145 VTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVVEKYGLTPRQYPDFAALRGDPSDNL 204 TGDRDALQLV++ VTVLYP++GVSE+TRFTP+AV EKYGLTPRQYPDFAALRGDPSDNL Sbjct 121 CTGDRDALQLVTEHVTVLYPKRGVSEMTRFTPDAVEEKYGLTPRQYPDFAALRGDPSDNL 180 Query 205 PGIPGVGEKTAAKWIAEYGSLRSLVDNVDAVRGKVGDALRANLASVVRNRELTDLVRDVP 264 P IPGVGEKTAAKWI ++GSL L+D VD V+GKVGDALRA+L+SV NR+LT+L+RDV Sbjct 181 PSIPGVGEKTAAKWIKQFGSLDDLIDRVDEVKGKVGDALRAHLSSVQLNRQLTELIRDVE 240 Query 265 LAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFDTLAAAGGPEVDEGFDVRGGALAPG 324 L P L L+PWDR+ +H LFD+LEFRVLRDRLF TL +A PE DEGF+V G ALAPG Sbjct 241 LEIAPSGLELRPWDREAVHALFDELEFRVLRDRLFATLQSAE-PEADEGFEVSGSALAPG 299 Query 325 TVRQWLAEHAGDGRRAGLTV--VGTHLPHGGDATAMAVAAADGEGAYLDTATLTPDDDAA 382 + WL HA G L+ VGT + D A+A A ADGEGAY+D + DDAA Sbjct 300 ALGAWLTAHASAGEPVALSFRAVGTSVR--SDLRAIAFATADGEGAYVDVTAMDQADDAA 357 Query 383 LAAWLADPAKPKALHEAKAAVHDLAGRGWTLEGVTSDTALAAYLVRPGQRSFTLDDLSLR 442 LAAWLADPA K H+ K +H + RGW L G+ DTALAAYLVRPGQR+F LDDL+LR Sbjct 358 LAAWLADPAIRKTGHDLKTPLHAIRARGWVLSGLAMDTALAAYLVRPGQRTFELDDLALR 417 Query 443 YLRRELRAETPQQQ-QLSLLDD--DDTDAETIQTTILRARAVIDLADALDAELARIDSTA 499 YL RELR+ET QLSLLD + + + IQ +++ARA+ +LA AL+ EL +I Sbjct 418 YLHRELRSETDGGDGQLSLLDGGAEGLEQKEIQDELVKARAIFELAGALEKELEQIGGAK 477 Query 500 LLGEMELPVQRVLAKMESAGIAVDLPMLTELQSQFGDQIRDAAEAAYGVIGKQINLGSPK 559 LL E+ELP+ V+ ++E AG+AVDL LT L++ + ++ AAE AY VIGKQINLGSPK Sbjct 478 LLAELELPLLEVITELEIAGVAVDLEQLTTLEAHYLSRVTQAAEEAYAVIGKQINLGSPK 537 Query 560 QLQVVLFDELGMPKTKRTKTGYTTDADALQSLFDKTGHPFLQHLLAHRDVTRLKVTVDGL 619 QLQVVLFDELGMPKTKRTKTGYTTDA+ALQ LF+KT HPFLQH+L HRD T+L+ TV+GL Sbjct 538 QLQVVLFDELGMPKTKRTKTGYTTDAEALQGLFEKTEHPFLQHMLEHRDATKLRTTVEGL 597 Query 620 LQAVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAGRRIRDAFVVGDGYAELMTA 679 +++VA DGRIHTT QTIAATGRLSSTEPNLQNIP+RT+ GRRIRDAFVVG+G+ ELMTA Sbjct 598 IKSVADDGRIHTTLLQTIAATGRLSSTEPNLQNIPVRTEEGRRIRDAFVVGEGFTELMTA 657 Query 680 DYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFVASRAFGVPIDEVTGELRRRVKAMSYGL 739 DYSQIEMRIMAHLS DEGLIEAFN+GEDLH+FVASRAF +P +E+T ELR RVKAMSYGL Sbjct 658 DYSQIEMRIMAHLSQDEGLIEAFNSGEDLHTFVASRAFSMPPEEITPELRYRVKAMSYGL 717 Query 740 AYGLSAYGLSQQLKISTEEANEQMDAYFARFGGVRDYLRAVVERARKDGYTSTVLGRRRY 799 AYGLSAYGLSQQL+ISTE+A QM+AYF RFGGVRDYL +VV A K+GYT TV GRRRY Sbjct 718 AYGLSAYGLSQQLRISTEDAKSQMEAYFDRFGGVRDYLHSVVGVAAKNGYTETVFGRRRY 777 Query 800 LPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIQVDKALNEAQLASRMLLQVHDEL 859 LP+L+S NRQ RE AER ALNAPIQGSAADIIKVAM+ V +AL EA+L SR+LLQVHDEL Sbjct 778 LPDLNSDNRQRREMAERMALNAPIQGSAADIIKVAMLNVHRALVEAKLKSRILLQVHDEL 837 Query 860 LFEIAPGERERVEALVRDKMGGAYPLDVPLEVSVGYGRSWDAAAH 904 + E+A GE+E++E LVR+ MG AY L VPLEVSVGYGRSW+ AAH Sbjct 838 VLEVAEGEKEQLEQLVREGMGSAYALAVPLEVSVGYGRSWNEAAH 882 >gi|296395192|ref|YP_003660076.1| DNA polymerase I [Segniliparus rotundus DSM 44985] gi|296182339|gb|ADG99245.1| DNA polymerase I [Segniliparus rotundus DSM 44985] Length=903 Score = 1144 bits (2959), Expect = 0.0, Method: Compositional matrix adjust. Identities = 589/901 (66%), Positives = 692/901 (77%), Gaps = 10/901 (1%) Query 13 AKPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLRDEAPTHIAAAF 72 AK L+LLDG+SLAFRAFYALP ENF+T G TTNAVYGF +MLINLLRDE PTH+A AF Sbjct 4 AKHKLLLLDGHSLAFRAFYALPEENFQTAAGQTTNAVYGFVSMLINLLRDEDPTHLAVAF 63 Query 73 DVSRQTFRLQRYPEYKANRSSTPDEFAGQIDITKEVLGALGITVLSEPGFEADDLIATLA 132 DVSR+TFR + YPEYKANRS +P+ F Q+++ KEVLGALGI V + G+EADD+IAT A Sbjct 64 DVSRKTFRAKMYPEYKANRSKSPESFPAQVELIKEVLGALGIVVEAHEGYEADDVIATYA 123 Query 133 TQAENEGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVVEKYGLTPRQYPD 192 T+A+ +GY+VL++TGDRDALQLV+ DVTVLYP +GVS+L R+TPE V EKYGLTP QYPD Sbjct 124 TKAQEQGYQVLIMTGDRDALQLVTPDVTVLYPNRGVSDLVRYTPEQVQEKYGLTPAQYPD 183 Query 193 FAALRGDPSDNLPGIPGVGEKTAAKWIAEYGSLRSLVDNVDAVRGKVGDALRANLASVVR 252 FAALRGDPSDNLP IPGVGEKTAA W+ Y SL L++ D V GK G ALR +L V + Sbjct 184 FAALRGDPSDNLPKIPGVGEKTAASWVRAYNSLDELLERADEVPGKTGQALREHLDQVRQ 243 Query 253 NRELTDLVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFDTLAAAGGPEVDE 312 NR+LT+LVRD+PL + L + WDRD +H LFD LEFRVLRDRLF TL+A PE +E Sbjct 244 NRQLTELVRDMPLGHSLAELERRQWDRDQVHALFDQLEFRVLRDRLFATLSAVE-PEAEE 302 Query 313 GFDVRGGALAPGTVRQWLAEHAGDGRRAGLTVVGTHLPHGGDATAM---------AVAAA 363 GFD+ G LAPG V WL EHA G R G+ V G +P GG T + AVA+ Sbjct 303 GFDIAGELLAPGQVGAWLDEHARTGERCGVAVHGDAVPSGGGGTPLKDGGRAWLIAVASP 362 Query 364 DGEGAYLDTATLTPDDDAALAAWLADPAKPKALHEAKAAVHDLAGRGWTLEGVTSDTALA 423 DG GA + T LT D AAL AWLADPA PKA HEAK A H L G+G+++ GVT+D LA Sbjct 363 DGSGAAIKTEALTAHDTAALGAWLADPAAPKAFHEAKWAAHALRGQGFSIAGVTTDIGLA 422 Query 424 AYLVRPGQRSFTLDDLSLRYLRRELRAETPQQQQLSLLDDDDTDAETIQTTILRARAVID 483 AY+ RPGQRSF L DL++RYLRR+L + Q+QLSLLD + D + A A+ + Sbjct 423 AYIARPGQRSFQLPDLAVRYLRRQLGPDDSGQKQLSLLDAEQDDNAEANGAVSEAAAIRE 482 Query 484 LADALDAELARIDSTALLGEMELPVQRVLAKMESAGIAVDLPMLTELQSQFGDQIRDAAE 543 L +ALD LA+ S LL MELP+ VL ME AGIAVD L L + F +++ AAE Sbjct 483 LGEALDDVLAKAGSADLLHTMELPLTFVLGAMEEAGIAVDQDALAGLHADFSARVQQAAE 542 Query 544 AAYGVIGKQINLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFDKTGHPFLQHL 603 +AY VIGK+INLGSPKQLQVVLFDELGMPKTK+TKTG+TTDADALQ LF++T HPFL HL Sbjct 543 SAYAVIGKEINLGSPKQLQVVLFDELGMPKTKKTKTGHTTDADALQWLFERTEHPFLSHL 602 Query 604 LAHRDVTRLKVTVDGLLQAVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAGRRI 663 L HRD TRL T GL++AV DGRIHTTF Q +AATGRLSST+PNLQNIP+RT+ RRI Sbjct 603 LEHRDATRLMTTAQGLIKAVGPDGRIHTTFRQDVAATGRLSSTDPNLQNIPVRTEEARRI 662 Query 664 RDAFVVGDGYAELMTADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFVASRAFGVPIDE 723 R FVVG+G+ LMTADYSQIEMRIMAHLSGDEGLIEAF TGEDLH+FVASRAFGVPID+ Sbjct 663 RGVFVVGEGHEALMTADYSQIEMRIMAHLSGDEGLIEAFRTGEDLHNFVASRAFGVPIDQ 722 Query 724 VTGELRRRVKAMSYGLAYGLSAYGLSQQLKISTEEANEQMDAYFARFGGVRDYLRAVVER 783 V ELRRRVKAMSYGLAYGLSA+GL+QQL +S EEA QM+AYFARFGGVRDYLR VVE Sbjct 723 VGAELRRRVKAMSYGLAYGLSAFGLAQQLGVSGEEAKAQMEAYFARFGGVRDYLREVVEE 782 Query 784 ARKDGYTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIQVDKALN 843 AR+ GYT T+ GRRRYLP+L S N+Q R AERAALNAPIQGSAADIIKVAMI V +AL Sbjct 783 ARRKGYTETLFGRRRYLPDLTSDNQQQRAVAERAALNAPIQGSAADIIKVAMIHVAEALA 842 Query 844 EAQLASRMLLQVHDELLFEIAPGERERVEALVRDKMGGAYPLDVPLEVSVGYGRSWDAAA 903 + SRMLLQVHDEL+ E+A GE++ + ALV ++MG A L VP++VSVG+G +WD AA Sbjct 843 ARNMRSRMLLQVHDELVLEVAEGEQDELAALVAEQMGSAIELSVPMDVSVGFGPNWDCAA 902 Query 904 H 904 H Sbjct 903 H 903 >gi|317509158|ref|ZP_07966782.1| DNA polymerase I [Segniliparus rugosus ATCC BAA-974] gi|316252515|gb|EFV11961.1| DNA polymerase I [Segniliparus rugosus ATCC BAA-974] Length=904 Score = 1139 bits (2945), Expect = 0.0, Method: Compositional matrix adjust. Identities = 593/904 (66%), Positives = 692/904 (77%), Gaps = 11/904 (1%) Query 11 DRAKPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLRDEAPTHIAA 70 D K L+LLDG+SLAFRAFYALP ENF+T GLTTNAVYGF +MLINLLRDE PTH+A Sbjct 2 DSPKHKLLLLDGHSLAFRAFYALPEENFRTAEGLTTNAVYGFVSMLINLLRDEDPTHVAV 61 Query 71 AFDVSRQTFRLQRYPEYKANRSSTPDEFAGQIDITKEVLGALGITVLSEPGFEADDLIAT 130 AFD+SR+TFR Q YPEYKA RS +P+ F GQ+D+ KEVLGALGI + G+EADD+IAT Sbjct 62 AFDISRKTFRSQMYPEYKATRSKSPESFPGQVDLIKEVLGALGIVWEAHEGYEADDIIAT 121 Query 131 LATQAENEGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVVEKYGLTPRQY 190 ATQ + +GY+VL++TGDRDALQLV+ D+TVLYP +GVS+L R+TPE V EKYGL+P QY Sbjct 122 YATQGQQQGYQVLIMTGDRDALQLVTPDITVLYPNRGVSDLIRYTPEQVEEKYGLSPAQY 181 Query 191 PDFAALRGDPSDNLPGIPGVGEKTAAKWIAEYGSLRSLVDNVDAVRGKVGDALRANLASV 250 PDFAALRGDPSDNLP IPGVGEKTA+ W+ Y SL L++ D V GK G ALR +L V Sbjct 182 PDFAALRGDPSDNLPKIPGVGEKTASSWVKSYHSLAELLERADEVTGKTGQALRDHLDQV 241 Query 251 VRNRELTDLVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFDTLAAAGGPEV 310 RNR+LT+LVRD+ + L Q WDRD +H LFD LEFRVLRDRLF TL A PE Sbjct 242 RRNRQLTELVRDMEVDHAVADLTRQQWDRDQVHALFDRLEFRVLRDRLFATLGAVE-PEA 300 Query 311 DEGFDVRGGALAPGTVRQWLAEHAGDGRRAGLTVVGTHLPHGGDATAM---------AVA 361 +E +V G LAPG V WLAEHA DG R G+ V G +P GG T + A+A Sbjct 301 EESVEVAGELLAPGAVGAWLAEHARDGERCGVAVHGAQVPSGGGGTPLKDGGGAWLVAIA 360 Query 362 AADGEGAYLDTATLTPDDDAALAAWLADPAKPKALHEAKAAVHDLAGRGWT-LEGVTSDT 420 ADG GA + T T+TP+D AL WLADPA PKA HEAK A H L G G+ + GVT+DT Sbjct 361 GADGHGAAIRTETMTPEDVRALDGWLADPAVPKAFHEAKWATHALRGGGFAEIAGVTTDT 420 Query 421 ALAAYLVRPGQRSFTLDDLSLRYLRRELRAETPQQQQLSLLDDDDTDAETIQTTILRARA 480 LAAY+ RPGQRSF L DL+LRYLRR+L E ++QLSLLDD + + +I A A Sbjct 421 GLAAYIARPGQRSFNLPDLALRYLRRQLGPEDGGEKQLSLLDDSTGEDKEADDSITEAAA 480 Query 481 VIDLADALDAELARIDSTALLGEMELPVQRVLAKMESAGIAVDLPMLTELQSQFGDQIRD 540 + +L ALD L + S LL MELP+ VLA+ME AGIAVD L L + F +++ Sbjct 481 IRELGGALDDVLDKAGSADLLRTMELPLTFVLARMEEAGIAVDQDGLAGLHADFAARVKQ 540 Query 541 AAEAAYGVIGKQINLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFDKTGHPFL 600 AAE+AY VIGK+INLGSPKQLQVVLFDELGMPKTK+TKTG+TTDADALQ LF+KT HPFL Sbjct 541 AAESAYSVIGKEINLGSPKQLQVVLFDELGMPKTKKTKTGHTTDADALQWLFEKTEHPFL 600 Query 601 QHLLAHRDVTRLKVTVDGLLQAVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAG 660 +LL HRD TRL T GL++A+ DGRIHTTF Q +AATGRLSST+PNLQNIP+RTD Sbjct 601 LYLLEHRDATRLMTTAQGLIKAIGPDGRIHTTFRQDVAATGRLSSTDPNLQNIPVRTDEA 660 Query 661 RRIRDAFVVGDGYAELMTADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFVASRAFGVP 720 RRIR FVVG+G+ LMTADYSQIEMRIMAHLSGD+GLIEAF TGEDLH+FVASRAFGVP Sbjct 661 RRIRGVFVVGEGHEALMTADYSQIEMRIMAHLSGDDGLIEAFRTGEDLHNFVASRAFGVP 720 Query 721 IDEVTGELRRRVKAMSYGLAYGLSAYGLSQQLKISTEEANEQMDAYFARFGGVRDYLRAV 780 IDEV ELRRRVKAMSYGLAYGLSA+GL+ QL +S EEA QMDAYFARFGGVRDYL AV Sbjct 721 IDEVGAELRRRVKAMSYGLAYGLSAFGLASQLGVSGEEAKAQMDAYFARFGGVRDYLHAV 780 Query 781 VERARKDGYTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIQVDK 840 VE AR+ GYT T+ GRRRYLP+L S N+Q R AERAALNAPIQGSAADIIKVAMI V + Sbjct 781 VEEARRKGYTETLFGRRRYLPDLTSDNQQQRAVAERAALNAPIQGSAADIIKVAMIHVAE 840 Query 841 ALNEAQLASRMLLQVHDELLFEIAPGERERVEALVRDKMGGAYPLDVPLEVSVGYGRSWD 900 AL E ++ SRMLLQVHDEL+ E+A GERE + ALV ++MG A L VP++VSVG+G +WD Sbjct 841 ALAEREMRSRMLLQVHDELVLEVADGEREELAALVSEQMGSAIELLVPMDVSVGFGANWD 900 Query 901 AAAH 904 AAAH Sbjct 901 AAAH 904 Lambda K H 0.318 0.134 0.381 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 2227749059530 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40