BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1630 Length=481 Score E Sequences producing significant alignments: (Bits) Value gi|15608768|ref|NP_216146.1| 30S ribosomal protein S1 [Mycobacte... 968 0.0 gi|31792816|ref|NP_855309.1| 30S ribosomal protein S1 [Mycobacte... 967 0.0 gi|344219450|gb|AEN00081.1| 30S ribosomal protein S1 [Mycobacter... 966 0.0 gi|340626635|ref|YP_004745087.1| putative ribosomal protein S1 R... 965 0.0 gi|254820984|ref|ZP_05225985.1| 30S ribosomal protein S1 [Mycoba... 922 0.0 gi|240168008|ref|ZP_04746667.1| 30S ribosomal protein S1 [Mycoba... 916 0.0 gi|41407423|ref|NP_960259.1| 30S ribosomal protein S1 [Mycobacte... 914 0.0 gi|296164500|ref|ZP_06847071.1| 30S ribosomal protein S1 [Mycoba... 912 0.0 gi|15827720|ref|NP_301983.1| 30S ribosomal protein S1 [Mycobacte... 910 0.0 gi|342860798|ref|ZP_08717448.1| 30S ribosomal protein S1 [Mycoba... 907 0.0 gi|333990445|ref|YP_004523059.1| 30S ribosomal protein S1 RpsA [... 898 0.0 gi|118617252|ref|YP_905584.1| 30S ribosomal protein S1 [Mycobact... 897 0.0 gi|120404330|ref|YP_954159.1| 30S ribosomal protein S1 [Mycobact... 895 0.0 gi|108799971|ref|YP_640168.1| 30S ribosomal protein S1 [Mycobact... 891 0.0 gi|336441306|gb|AEI54878.1| 30S ribosomal protein S1 [Mycobacter... 884 0.0 gi|336441308|gb|AEI54879.1| 30S ribosomal protein S1 [Mycobacter... 880 0.0 gi|183427450|gb|ACC62511.1| S1 ribosomal protein [Mycobacterium ... 880 0.0 gi|336441302|gb|AEI54876.1| 30S ribosomal protein S1 [Mycobacter... 879 0.0 gi|118472813|ref|YP_888124.1| 30S ribosomal protein S1 [Mycobact... 879 0.0 gi|169629382|ref|YP_001703031.1| 30S ribosomal protein S1 [Mycob... 879 0.0 gi|262202770|ref|YP_003273978.1| RNA-binding S1 domain-containin... 877 0.0 gi|343927330|ref|ZP_08766804.1| 30S ribosomal protein S1 [Gordon... 875 0.0 gi|145224145|ref|YP_001134823.1| 30S ribosomal protein S1 [Mycob... 872 0.0 gi|312139898|ref|YP_004007234.1| 30S ribosomal protein s1 rpsa [... 872 0.0 gi|325674222|ref|ZP_08153911.1| 30S ribosomal protein S1 [Rhodoc... 871 0.0 gi|54023865|ref|YP_118107.1| 30S ribosomal protein S1 [Nocardia ... 870 0.0 gi|326382653|ref|ZP_08204344.1| 30S ribosomal protein S1 [Gordon... 863 0.0 gi|333919158|ref|YP_004492739.1| RNA binding S1 domain-containin... 859 0.0 gi|296140136|ref|YP_003647379.1| RNA binding S1 domain-containin... 851 0.0 gi|237785408|ref|YP_002906113.1| 30S ribosomal protein S1 [Coryn... 838 0.0 gi|229492760|ref|ZP_04386561.1| 30S ribosomal protein S1 [Rhodoc... 832 0.0 gi|226306799|ref|YP_002766759.1| 30S ribosomal protein S1 [Rhodo... 830 0.0 gi|111017993|ref|YP_700965.1| 30S ribosomal protein S1 [Rhodococ... 828 0.0 gi|334563708|ref|ZP_08516699.1| 30S ribosomal protein S1 [Coryne... 825 0.0 gi|559914|emb|CAA86365.1| 30S ribosomal protein S1 [Mycobacteriu... 825 0.0 gi|226360123|ref|YP_002777901.1| 30S ribosomal protein S1 [Rhodo... 823 0.0 gi|319950983|ref|ZP_08024854.1| 30S ribosomal protein S1 [Dietzi... 822 0.0 gi|344043437|gb|EGV39130.1| 30S ribosomal protein S1 [Corynebact... 818 0.0 gi|68263494|emb|CAI36982.1| 30S ribosomal protein S1 [Corynebact... 813 0.0 gi|19552573|ref|NP_600575.1| 30S ribosomal protein S1 [Corynebac... 813 0.0 gi|145295496|ref|YP_001138317.1| 30S ribosomal protein S1 [Coryn... 813 0.0 gi|340794195|ref|YP_004759658.1| 30S ribosomal protein S1 [Coryn... 813 0.0 gi|25028013|ref|NP_738067.1| 30S ribosomal protein S1 [Corynebac... 812 0.0 gi|161986623|ref|YP_250600.2| 30S ribosomal protein S1 [Coryneba... 811 0.0 gi|260578011|ref|ZP_05845934.1| 30S ribosomal protein S1 [Coryne... 811 0.0 gi|336325470|ref|YP_004605436.1| 30S ribosomal protein S1 [Coryn... 811 0.0 gi|213965205|ref|ZP_03393402.1| 30S ribosomal protein S1 [Coryne... 810 0.0 gi|172040820|ref|YP_001800534.1| 30S ribosomal protein S1 [Coryn... 810 0.0 gi|225022623|ref|ZP_03711815.1| hypothetical protein CORMATOL_02... 808 0.0 gi|337290612|ref|YP_004629633.1| 30S ribosomal protein S1 [Coryn... 806 0.0 >gi|15608768|ref|NP_216146.1| 30S ribosomal protein S1 [Mycobacterium tuberculosis H37Rv] gi|15841085|ref|NP_336122.1| 30S ribosomal protein S1 [Mycobacterium tuberculosis CDC1551] gi|148661425|ref|YP_001282948.1| 30S ribosomal protein S1 [Mycobacterium tuberculosis H37Ra] 57 more sequence titles Length=481 Score = 968 bits (2503), Expect = 0.0, Method: Compositional matrix adjust. Identities = 481/481 (100%), Positives = 481/481 (100%), Gaps = 0/481 (0%) Query 1 MPSPTVTSPQVAVNDIGSSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE 60 MPSPTVTSPQVAVNDIGSSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE Sbjct 1 MPSPTVTSPQVAVNDIGSSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE 60 Query 61 GVIPARELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALK 120 GVIPARELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALK Sbjct 61 GVIPARELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALK 120 Query 121 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNR 180 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNR Sbjct 121 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNR 180 Query 181 NNVVLSRRAWLEQTQSEVRSEFLNNLQKGTIRKGVVSSIVNFGAFVDLGGVDGLVHVSEL 240 NNVVLSRRAWLEQTQSEVRSEFLNNLQKGTIRKGVVSSIVNFGAFVDLGGVDGLVHVSEL Sbjct 181 NNVVLSRRAWLEQTQSEVRSEFLNNLQKGTIRKGVVSSIVNFGAFVDLGGVDGLVHVSEL 240 Query 241 SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK 300 SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK Sbjct 241 SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK 300 Query 301 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISL 360 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISL Sbjct 301 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISL 360 Query 361 SLKQANEDYTEEFDPAKYGMADSYDEQGNYIFPEGFDAETNEWLEGFEKQRAEWEARYAE 420 SLKQANEDYTEEFDPAKYGMADSYDEQGNYIFPEGFDAETNEWLEGFEKQRAEWEARYAE Sbjct 361 SLKQANEDYTEEFDPAKYGMADSYDEQGNYIFPEGFDAETNEWLEGFEKQRAEWEARYAE 420 Query 421 AERRHKMHTAQMEKFAAAEAAGRGADDQSSASSAPSEKTAGGSLASDAQLAALREKLAGS 480 AERRHKMHTAQMEKFAAAEAAGRGADDQSSASSAPSEKTAGGSLASDAQLAALREKLAGS Sbjct 421 AERRHKMHTAQMEKFAAAEAAGRGADDQSSASSAPSEKTAGGSLASDAQLAALREKLAGS 480 Query 481 A 481 A Sbjct 481 A 481 >gi|31792816|ref|NP_855309.1| 30S ribosomal protein S1 [Mycobacterium bovis AF2122/97] gi|121637537|ref|YP_977760.1| 30S ribosomal protein S1 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224990012|ref|YP_002644699.1| 30S ribosomal protein S1 [Mycobacterium bovis BCG str. Tokyo 172] gi|31618406|emb|CAD96324.1| PROBABLE RIBOSOMAL PROTEIN S1 RPSA [Mycobacterium bovis AF2122/97] gi|121493184|emb|CAL71655.1| Probable ribosomal protein S1 rpsA [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224773125|dbj|BAH25931.1| 30S ribosomal protein S1 [Mycobacterium bovis BCG str. Tokyo 172] gi|341601555|emb|CCC64228.1| probable ribosomal protein S1 rpsA [Mycobacterium bovis BCG str. Moreau RDJ] Length=481 Score = 967 bits (2499), Expect = 0.0, Method: Compositional matrix adjust. Identities = 480/481 (99%), Positives = 480/481 (99%), Gaps = 0/481 (0%) Query 1 MPSPTVTSPQVAVNDIGSSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE 60 MPSPTVTSPQVAVNDIGSSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE Sbjct 1 MPSPTVTSPQVAVNDIGSSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE 60 Query 61 GVIPARELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALK 120 GVIPARELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALK Sbjct 61 GVIPARELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALK 120 Query 121 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNR 180 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNR Sbjct 121 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNR 180 Query 181 NNVVLSRRAWLEQTQSEVRSEFLNNLQKGTIRKGVVSSIVNFGAFVDLGGVDGLVHVSEL 240 NNVVLSRRAWLEQTQSEVRSEFLNNLQKGTIRKGVVSSIVNFGAFVDLGGVDGLVHVSEL Sbjct 181 NNVVLSRRAWLEQTQSEVRSEFLNNLQKGTIRKGVVSSIVNFGAFVDLGGVDGLVHVSEL 240 Query 241 SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK 300 SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK Sbjct 241 SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK 300 Query 301 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISL 360 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISL Sbjct 301 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISL 360 Query 361 SLKQANEDYTEEFDPAKYGMADSYDEQGNYIFPEGFDAETNEWLEGFEKQRAEWEARYAE 420 SLKQANEDYTEEFDPAKYGMADSYDEQGNYIFPEGFDAETNEWLEGFEKQRAEWEARYAE Sbjct 361 SLKQANEDYTEEFDPAKYGMADSYDEQGNYIFPEGFDAETNEWLEGFEKQRAEWEARYAE 420 Query 421 AERRHKMHTAQMEKFAAAEAAGRGADDQSSASSAPSEKTAGGSLASDAQLAALREKLAGS 480 AERRHKMHTAQMEKFAAAE AGRGADDQSSASSAPSEKTAGGSLASDAQLAALREKLAGS Sbjct 421 AERRHKMHTAQMEKFAAAETAGRGADDQSSASSAPSEKTAGGSLASDAQLAALREKLAGS 480 Query 481 A 481 A Sbjct 481 A 481 >gi|344219450|gb|AEN00081.1| 30S ribosomal protein S1 [Mycobacterium tuberculosis CTRI-2] Length=481 Score = 966 bits (2498), Expect = 0.0, Method: Compositional matrix adjust. Identities = 480/481 (99%), Positives = 480/481 (99%), Gaps = 0/481 (0%) Query 1 MPSPTVTSPQVAVNDIGSSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE 60 MPSPTVTSPQVAVNDIGSSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE Sbjct 1 MPSPTVTSPQVAVNDIGSSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE 60 Query 61 GVIPARELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALK 120 GVIPARELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALK Sbjct 61 GVIPARELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALK 120 Query 121 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNR 180 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNR Sbjct 121 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNR 180 Query 181 NNVVLSRRAWLEQTQSEVRSEFLNNLQKGTIRKGVVSSIVNFGAFVDLGGVDGLVHVSEL 240 NNVVLSRRAWLEQTQSEVRSEFLNNLQKGTIRKGVVSSIVNFGAFVDLGGVDGLVHVSEL Sbjct 181 NNVVLSRRAWLEQTQSEVRSEFLNNLQKGTIRKGVVSSIVNFGAFVDLGGVDGLVHVSEL 240 Query 241 SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK 300 SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK Sbjct 241 SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK 300 Query 301 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISL 360 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISL Sbjct 301 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISL 360 Query 361 SLKQANEDYTEEFDPAKYGMADSYDEQGNYIFPEGFDAETNEWLEGFEKQRAEWEARYAE 420 SLKQANEDYTEEFDPAKYGMADSYDEQGNYIFPEGFDAETNEWLEGFEKQRAEWEARYAE Sbjct 361 SLKQANEDYTEEFDPAKYGMADSYDEQGNYIFPEGFDAETNEWLEGFEKQRAEWEARYAE 420 Query 421 AERRHKMHTAQMEKFAAAEAAGRGADDQSSASSAPSEKTAGGSLASDAQLAALREKLAGS 480 AERRHKMHTAQ EKFAAAEAAGRGADDQSSASSAPSEKTAGGSLASDAQLAALREKLAGS Sbjct 421 AERRHKMHTAQTEKFAAAEAAGRGADDQSSASSAPSEKTAGGSLASDAQLAALREKLAGS 480 Query 481 A 481 A Sbjct 481 A 481 >gi|340626635|ref|YP_004745087.1| putative ribosomal protein S1 RPSA [Mycobacterium canettii CIPT 140010059] gi|340004825|emb|CCC43970.1| putative ribosomal protein S1 RPSA [Mycobacterium canettii CIPT 140010059] Length=481 Score = 965 bits (2494), Expect = 0.0, Method: Compositional matrix adjust. Identities = 479/481 (99%), Positives = 479/481 (99%), Gaps = 0/481 (0%) Query 1 MPSPTVTSPQVAVNDIGSSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE 60 MPSP VTSPQVAVNDIGSSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE Sbjct 1 MPSPAVTSPQVAVNDIGSSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE 60 Query 61 GVIPARELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALK 120 GVIPARELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALK Sbjct 61 GVIPARELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALK 120 Query 121 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNR 180 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNR Sbjct 121 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNR 180 Query 181 NNVVLSRRAWLEQTQSEVRSEFLNNLQKGTIRKGVVSSIVNFGAFVDLGGVDGLVHVSEL 240 NNVVLSRRAWLEQTQSEVRSEFLNNLQKG IRKGVVSSIVNFGAFVDLGGVDGLVHVSEL Sbjct 181 NNVVLSRRAWLEQTQSEVRSEFLNNLQKGAIRKGVVSSIVNFGAFVDLGGVDGLVHVSEL 240 Query 241 SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK 300 SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK Sbjct 241 SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK 300 Query 301 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISL 360 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISL Sbjct 301 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISL 360 Query 361 SLKQANEDYTEEFDPAKYGMADSYDEQGNYIFPEGFDAETNEWLEGFEKQRAEWEARYAE 420 SLKQANEDYTEEFDPAKYGMADSYDEQGNYIFPEGFDAETNEWLEGFEKQRAEWEARYAE Sbjct 361 SLKQANEDYTEEFDPAKYGMADSYDEQGNYIFPEGFDAETNEWLEGFEKQRAEWEARYAE 420 Query 421 AERRHKMHTAQMEKFAAAEAAGRGADDQSSASSAPSEKTAGGSLASDAQLAALREKLAGS 480 AERRHKMHTAQMEKFAAAEAAGRGADDQSSASSAPSEKTAGGSLASDAQLAALREKLAGS Sbjct 421 AERRHKMHTAQMEKFAAAEAAGRGADDQSSASSAPSEKTAGGSLASDAQLAALREKLAGS 480 Query 481 A 481 A Sbjct 481 A 481 >gi|254820984|ref|ZP_05225985.1| 30S ribosomal protein S1 [Mycobacterium intracellulare ATCC 13950] Length=479 Score = 922 bits (2383), Expect = 0.0, Method: Compositional matrix adjust. Identities = 462/481 (97%), Positives = 469/481 (98%), Gaps = 2/481 (0%) Query 1 MPSPTVTSPQVAVNDIGSSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE 60 MPSP VTSPQVAVNDIGSSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE Sbjct 1 MPSPAVTSPQVAVNDIGSSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE 60 Query 61 GVIPARELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALK 120 GVIPARELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALK Sbjct 61 GVIPARELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALK 120 Query 121 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNR 180 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNR Sbjct 121 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNR 180 Query 181 NNVVLSRRAWLEQTQSEVRSEFLNNLQKGTIRKGVVSSIVNFGAFVDLGGVDGLVHVSEL 240 NNVVLSRRAWLEQTQSEVRSEFLN LQKG IRKGVVSSIVNFGAFVDLGGVDGLVHVSEL Sbjct 181 NNVVLSRRAWLEQTQSEVRSEFLNQLQKGAIRKGVVSSIVNFGAFVDLGGVDGLVHVSEL 240 Query 241 SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK 300 SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK Sbjct 241 SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK 300 Query 301 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISL 360 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISL Sbjct 301 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISL 360 Query 361 SLKQANEDYTEEFDPAKYGMADSYDEQGNYIFPEGFDAETNEWLEGFEKQRAEWEARYAE 420 SLKQANEDYT+EFDPAKYGMADSYDEQGNYIFPEGFD+ETNEWLEGF+KQR EWEARYAE Sbjct 361 SLKQANEDYTDEFDPAKYGMADSYDEQGNYIFPEGFDSETNEWLEGFDKQRTEWEARYAE 420 Query 421 AERRHKMHTAQMEKFAAAEAAGRGADDQSSASSAPSEKTAGGSLASDAQLAALREKLAGS 480 AERRHKMHTAQMEKF AAEAAG A +QS + AP+EK AGGSLASDAQLAALREKLAG+ Sbjct 421 AERRHKMHTAQMEKF-AAEAAGHTAGEQSPGNGAPAEK-AGGSLASDAQLAALREKLAGN 478 Query 481 A 481 A Sbjct 479 A 479 >gi|240168008|ref|ZP_04746667.1| 30S ribosomal protein S1 [Mycobacterium kansasii ATCC 12478] Length=481 Score = 916 bits (2367), Expect = 0.0, Method: Compositional matrix adjust. Identities = 463/481 (97%), Positives = 469/481 (98%), Gaps = 0/481 (0%) Query 1 MPSPTVTSPQVAVNDIGSSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE 60 MPSP VTSPQVAVNDIG+SEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE Sbjct 1 MPSPAVTSPQVAVNDIGTSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE 60 Query 61 GVIPARELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALK 120 GVIPARELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALK Sbjct 61 GVIPARELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALK 120 Query 121 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNR 180 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNR Sbjct 121 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNR 180 Query 181 NNVVLSRRAWLEQTQSEVRSEFLNNLQKGTIRKGVVSSIVNFGAFVDLGGVDGLVHVSEL 240 NNVVLSRRAWLEQTQSEVRSEFLN LQKGTIRKGVVSSIVNFGAFVDLGGVDGLVHVSEL Sbjct 181 NNVVLSRRAWLEQTQSEVRSEFLNQLQKGTIRKGVVSSIVNFGAFVDLGGVDGLVHVSEL 240 Query 241 SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK 300 SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK Sbjct 241 SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK 300 Query 301 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISL 360 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISL Sbjct 301 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISL 360 Query 361 SLKQANEDYTEEFDPAKYGMADSYDEQGNYIFPEGFDAETNEWLEGFEKQRAEWEARYAE 420 SLKQANEDYTEEFDPAKYGMADSYDEQGNYIFPEGFDAETNEW+EGF+ QR EWEARYAE Sbjct 361 SLKQANEDYTEEFDPAKYGMADSYDEQGNYIFPEGFDAETNEWMEGFDAQRNEWEARYAE 420 Query 421 AERRHKMHTAQMEKFAAAEAAGRGADDQSSASSAPSEKTAGGSLASDAQLAALREKLAGS 480 AERRHKMHTAQMEKFAAAEAAG G +Q S S A +EK AGGSLASDAQLAALREKLAG+ Sbjct 421 AERRHKMHTAQMEKFAAAEAAGHGGGEQPSGSQASTEKAAGGSLASDAQLAALREKLAGN 480 Query 481 A 481 A Sbjct 481 A 481 >gi|41407423|ref|NP_960259.1| 30S ribosomal protein S1 [Mycobacterium avium subsp. paratuberculosis K-10] gi|118464486|ref|YP_882336.1| 30S ribosomal protein S1 [Mycobacterium avium 104] gi|254775602|ref|ZP_05217118.1| 30S ribosomal protein S1 [Mycobacterium avium subsp. avium ATCC 25291] gi|41395775|gb|AAS03642.1| RpsA [Mycobacterium avium subsp. paratuberculosis K-10] gi|118165773|gb|ABK66670.1| 30S ribosomal protein S1 [Mycobacterium avium 104] gi|336457775|gb|EGO36769.1| ribosomal protein S1 [Mycobacterium avium subsp. paratuberculosis S397] Length=480 Score = 914 bits (2363), Expect = 0.0, Method: Compositional matrix adjust. Identities = 465/481 (97%), Positives = 469/481 (98%), Gaps = 1/481 (0%) Query 1 MPSPTVTSPQVAVNDIGSSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE 60 MPSP VTSPQVAVNDIGSSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE Sbjct 1 MPSPAVTSPQVAVNDIGSSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE 60 Query 61 GVIPARELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALK 120 GVIPARELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALK Sbjct 61 GVIPARELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALK 120 Query 121 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNR 180 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNR Sbjct 121 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNR 180 Query 181 NNVVLSRRAWLEQTQSEVRSEFLNNLQKGTIRKGVVSSIVNFGAFVDLGGVDGLVHVSEL 240 NNVVLSRRAWLEQTQSEVRSEFLN LQKG IRKGVVSSIVNFGAFVDLGGVDGLVHVSEL Sbjct 181 NNVVLSRRAWLEQTQSEVRSEFLNQLQKGAIRKGVVSSIVNFGAFVDLGGVDGLVHVSEL 240 Query 241 SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK 300 SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK Sbjct 241 SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK 300 Query 301 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISL 360 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISL Sbjct 301 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISL 360 Query 361 SLKQANEDYTEEFDPAKYGMADSYDEQGNYIFPEGFDAETNEWLEGFEKQRAEWEARYAE 420 SLKQANEDYTEEFDPAKYGMADSYDEQGNYIFPEGFD ETNEWLEGFEKQRAEWEARYAE Sbjct 361 SLKQANEDYTEEFDPAKYGMADSYDEQGNYIFPEGFDPETNEWLEGFEKQRAEWEARYAE 420 Query 421 AERRHKMHTAQMEKFAAAEAAGRGADDQSSASSAPSEKTAGGSLASDAQLAALREKLAGS 480 AERRHKMHTAQMEKFAAAEAAG +QS + AP+EK AGGSLASDAQLAALREKLAG+ Sbjct 421 AERRHKMHTAQMEKFAAAEAAGHAGGEQSPGNGAPAEK-AGGSLASDAQLAALREKLAGN 479 Query 481 A 481 A Sbjct 480 A 480 >gi|296164500|ref|ZP_06847071.1| 30S ribosomal protein S1 [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295900100|gb|EFG79535.1| 30S ribosomal protein S1 [Mycobacterium parascrofulaceum ATCC BAA-614] Length=480 Score = 912 bits (2357), Expect = 0.0, Method: Compositional matrix adjust. Identities = 466/482 (97%), Positives = 470/482 (98%), Gaps = 3/482 (0%) Query 1 MPSPTVTSPQVAVNDIGSSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE 60 MPSPTVTSPQVAVNDIGSSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE Sbjct 1 MPSPTVTSPQVAVNDIGSSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE 60 Query 61 GVIPARELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALK 120 GVIPARELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALK Sbjct 61 GVIPARELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALK 120 Query 121 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNR 180 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNR Sbjct 121 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNR 180 Query 181 NNVVLSRRAWLEQTQSEVRSEFLNNLQKGTIRKGVVSSIVNFGAFVDLGGVDGLVHVSEL 240 NNVVLSRRAWLEQTQSEVRSEFLN LQKG IRKGVVSSIVNFGAFVDLGGVDGLVHVSEL Sbjct 181 NNVVLSRRAWLEQTQSEVRSEFLNQLQKGAIRKGVVSSIVNFGAFVDLGGVDGLVHVSEL 240 Query 241 SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK 300 SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK Sbjct 241 SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK 300 Query 301 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISL 360 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISL Sbjct 301 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISL 360 Query 361 SLKQANEDYTEEFDPAKYGMADSYDEQGNYIFPEGFDAETNEWLEGFEKQRAEWEARYAE 420 SLKQANEDYTEEFDPAKYGMADSYDEQGNYIFPEGFDAETNEWLEGFE QRAEWEARYAE Sbjct 361 SLKQANEDYTEEFDPAKYGMADSYDEQGNYIFPEGFDAETNEWLEGFETQRAEWEARYAE 420 Query 421 AERRHKMHTAQMEKFAAAEAAGRGADDQSSAS-SAPSEKTAGGSLASDAQLAALREKLAG 479 AERRHKMHTAQMEKFAAAEAA G +QSS + A EK+AGGSLASDAQLAALREKLAG Sbjct 421 AERRHKMHTAQMEKFAAAEAA--GHAEQSSGNGGAREEKSAGGSLASDAQLAALREKLAG 478 Query 480 SA 481 +A Sbjct 479 NA 480 >gi|15827720|ref|NP_301983.1| 30S ribosomal protein S1 [Mycobacterium leprae TN] gi|221230197|ref|YP_002503613.1| 30S ribosomal protein S1 [Mycobacterium leprae Br4923] gi|13432211|sp|P46836.2|RS1_MYCLE RecName: Full=30S ribosomal protein S1 gi|13093271|emb|CAC31763.1| 30S ribosomal protein S1 [Mycobacterium leprae] gi|219933304|emb|CAR71477.1| 30S ribosomal protein S1 [Mycobacterium leprae Br4923] Length=481 Score = 910 bits (2352), Expect = 0.0, Method: Compositional matrix adjust. Identities = 451/481 (94%), Positives = 460/481 (96%), Gaps = 0/481 (0%) Query 1 MPSPTVTSPQVAVNDIGSSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE 60 M P V SPQ+AVND+GSSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE Sbjct 1 MSIPAVPSPQIAVNDVGSSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE 60 Query 61 GVIPARELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALK 120 GVIPARELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALK Sbjct 61 GVIPARELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALK 120 Query 121 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNR 180 EKDEAVKG VIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNR Sbjct 121 EKDEAVKGIVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNR 180 Query 181 NNVVLSRRAWLEQTQSEVRSEFLNNLQKGTIRKGVVSSIVNFGAFVDLGGVDGLVHVSEL 240 NNVVLSRRAWLEQTQSEVRSEFLN LQKG IRKGVVSSIVNFGAFVDLGGVDGLVHVSEL Sbjct 181 NNVVLSRRAWLEQTQSEVRSEFLNQLQKGAIRKGVVSSIVNFGAFVDLGGVDGLVHVSEL 240 Query 241 SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK 300 SWKHIDHPSEVVQVG+EVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK Sbjct 241 SWKHIDHPSEVVQVGNEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK 300 Query 301 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISL 360 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISL Sbjct 301 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISL 360 Query 361 SLKQANEDYTEEFDPAKYGMADSYDEQGNYIFPEGFDAETNEWLEGFEKQRAEWEARYAE 420 SLKQANEDY EEFDPAKYGMADSYDEQGNYIFPEGFD ++NEWLEGF+ QRAEWEARYAE Sbjct 361 SLKQANEDYIEEFDPAKYGMADSYDEQGNYIFPEGFDPDSNEWLEGFDTQRAEWEARYAE 420 Query 421 AERRHKMHTAQMEKFAAAEAAGRGADDQSSASSAPSEKTAGGSLASDAQLAALREKLAGS 480 AERR+KMHT QMEKFAA E AG G+ +Q ASS PS K GGSLASDAQLAALREKLAGS Sbjct 421 AERRYKMHTIQMEKFAATEEAGHGSSEQPPASSTPSAKATGGSLASDAQLAALREKLAGS 480 Query 481 A 481 A Sbjct 481 A 481 >gi|342860798|ref|ZP_08717448.1| 30S ribosomal protein S1 [Mycobacterium colombiense CECT 3035] gi|342131822|gb|EGT85079.1| 30S ribosomal protein S1 [Mycobacterium colombiense CECT 3035] Length=478 Score = 907 bits (2345), Expect = 0.0, Method: Compositional matrix adjust. Identities = 463/481 (97%), Positives = 467/481 (98%), Gaps = 3/481 (0%) Query 1 MPSPTVTSPQVAVNDIGSSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE 60 MPSP VTSPQVAVNDIGSSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE Sbjct 1 MPSPAVTSPQVAVNDIGSSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE 60 Query 61 GVIPARELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALK 120 GVIPARELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALK Sbjct 61 GVIPARELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALK 120 Query 121 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNR 180 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNR Sbjct 121 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNR 180 Query 181 NNVVLSRRAWLEQTQSEVRSEFLNNLQKGTIRKGVVSSIVNFGAFVDLGGVDGLVHVSEL 240 NNVVLSRRAWLEQTQSEVRSEFLN LQKG IRKGVVSSIVNFGAFVDLGGVDGLVHVSEL Sbjct 181 NNVVLSRRAWLEQTQSEVRSEFLNQLQKGAIRKGVVSSIVNFGAFVDLGGVDGLVHVSEL 240 Query 241 SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK 300 SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK Sbjct 241 SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK 300 Query 301 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISL 360 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISL Sbjct 301 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISL 360 Query 361 SLKQANEDYTEEFDPAKYGMADSYDEQGNYIFPEGFDAETNEWLEGFEKQRAEWEARYAE 420 SLKQANEDYT+EFDPAKYGMADSYDEQGNYIFPEGFDAETNEWLEGF+KQR EWEARYAE Sbjct 361 SLKQANEDYTDEFDPAKYGMADSYDEQGNYIFPEGFDAETNEWLEGFDKQRNEWEARYAE 420 Query 421 AERRHKMHTAQMEKFAAAEAAGRGADDQSSASSAPSEKTAGGSLASDAQLAALREKLAGS 480 AERRHKMHTAQMEKFAAAEAAG QS + AP EK AGGSLASDAQLAALREKLAG+ Sbjct 421 AERRHKMHTAQMEKFAAAEAAGHAE--QSPGNGAPPEK-AGGSLASDAQLAALREKLAGN 477 Query 481 A 481 A Sbjct 478 A 478 >gi|333990445|ref|YP_004523059.1| 30S ribosomal protein S1 RpsA [Mycobacterium sp. JDM601] gi|333486413|gb|AEF35805.1| ribosomal protein S1 RpsA [Mycobacterium sp. JDM601] Length=479 Score = 898 bits (2320), Expect = 0.0, Method: Compositional matrix adjust. Identities = 449/482 (94%), Positives = 463/482 (97%), Gaps = 5/482 (1%) Query 1 MPSPTVTSPQVAVNDIGSSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE 60 MPSPTVTSPQVAVNDIGS+EDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE Sbjct 1 MPSPTVTSPQVAVNDIGSAEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE 60 Query 61 GVIPARELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALK 120 GVIP+RELSIKHDVDP+EVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIE LK Sbjct 61 GVIPSRELSIKHDVDPHEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEELK 120 Query 121 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNR 180 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIG+EIEAKIIELDKNR Sbjct 121 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGREIEAKIIELDKNR 180 Query 181 NNVVLSRRAWLEQTQSEVRSEFLNNLQKGTIRKGVVSSIVNFGAFVDLGGVDGLVHVSEL 240 NNVVLSRRAWLEQTQSEVRSEFLN LQKG +RKGVVSSIVNFGAFVDLGGVDGLVHVSEL Sbjct 181 NNVVLSRRAWLEQTQSEVRSEFLNQLQKGAVRKGVVSSIVNFGAFVDLGGVDGLVHVSEL 240 Query 241 SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK 300 SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK Sbjct 241 SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK 300 Query 301 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISL 360 VTKLVPFGAFVRVEEGIEGLVHISELAE+HVEVPDQVVAVGDDAMVKVIDIDL+RRRISL Sbjct 301 VTKLVPFGAFVRVEEGIEGLVHISELAEQHVEVPDQVVAVGDDAMVKVIDIDLDRRRISL 360 Query 361 SLKQANEDYTEEFDPAKYGMADSYDEQGNYIFPEGFDAETNEWLEGFEKQRAEWEARYAE 420 SLKQANEDYTEEFDP+KYGMADSYDEQGNYIFPEGFDAETNEW+EGF+KQRAEWEARYAE Sbjct 361 SLKQANEDYTEEFDPSKYGMADSYDEQGNYIFPEGFDAETNEWIEGFDKQRAEWEARYAE 420 Query 421 AERRHKMHTAQMEKFAAAE-AAGRGADDQSSASSAPSEKTAGGSLASDAQLAALREKLAG 479 AERRHKMHTAQ+EKFAAAE A R + S AP AGGSLASD QLAALREKLAG Sbjct 421 AERRHKMHTAQIEKFAAAEHAEPRSGANGSHRDEAP----AGGSLASDEQLAALREKLAG 476 Query 480 SA 481 ++ Sbjct 477 NS 478 >gi|118617252|ref|YP_905584.1| 30S ribosomal protein S1 [Mycobacterium ulcerans Agy99] gi|183982447|ref|YP_001850738.1| ribosomal protein S1 RpsA [Mycobacterium marinum M] gi|118569362|gb|ABL04113.1| ribosomal protein S1 RpsA [Mycobacterium ulcerans Agy99] gi|183175773|gb|ACC40883.1| ribosomal protein S1 RpsA [Mycobacterium marinum M] Length=481 Score = 897 bits (2317), Expect = 0.0, Method: Compositional matrix adjust. Identities = 458/481 (96%), Positives = 470/481 (98%), Gaps = 0/481 (0%) Query 1 MPSPTVTSPQVAVNDIGSSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE 60 MPSPTVTSPQVAVNDIGS+EDFLAAID+TIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE Sbjct 1 MPSPTVTSPQVAVNDIGSAEDFLAAIDQTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE 60 Query 61 GVIPARELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALK 120 GVIPARELSIKHDVDPNEVV+VGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALK Sbjct 61 GVIPARELSIKHDVDPNEVVTVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALK 120 Query 121 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNR 180 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNR Sbjct 121 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNR 180 Query 181 NNVVLSRRAWLEQTQSEVRSEFLNNLQKGTIRKGVVSSIVNFGAFVDLGGVDGLVHVSEL 240 NNVVLSRRAWLEQTQSEVRSEFLN LQKGTIRKGVVSSIVNFGAFVDLGGVDGLVHVSEL Sbjct 181 NNVVLSRRAWLEQTQSEVRSEFLNQLQKGTIRKGVVSSIVNFGAFVDLGGVDGLVHVSEL 240 Query 241 SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK 300 SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK Sbjct 241 SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK 300 Query 301 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISL 360 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISL Sbjct 301 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISL 360 Query 361 SLKQANEDYTEEFDPAKYGMADSYDEQGNYIFPEGFDAETNEWLEGFEKQRAEWEARYAE 420 SLKQANEDYT+EFDPAKYGMADSYD+QGNYIFPEGFD ETNEW+EGF+ QRAEWEARYAE Sbjct 361 SLKQANEDYTDEFDPAKYGMADSYDDQGNYIFPEGFDPETNEWMEGFDTQRAEWEARYAE 420 Query 421 AERRHKMHTAQMEKFAAAEAAGRGADDQSSASSAPSEKTAGGSLASDAQLAALREKLAGS 480 AERRHKMHT QMEKFAAAEAAG G + S+SS+ SEK+AGGSLASDAQLAALREKLAG+ Sbjct 421 AERRHKMHTTQMEKFAAAEAAGHGDNGGGSSSSSSSEKSAGGSLASDAQLAALREKLAGN 480 Query 481 A 481 Sbjct 481 G 481 >gi|120404330|ref|YP_954159.1| 30S ribosomal protein S1 [Mycobacterium vanbaalenii PYR-1] gi|119957148|gb|ABM14153.1| SSU ribosomal protein S1P [Mycobacterium vanbaalenii PYR-1] Length=481 Score = 895 bits (2312), Expect = 0.0, Method: Compositional matrix adjust. Identities = 450/481 (94%), Positives = 463/481 (97%), Gaps = 0/481 (0%) Query 1 MPSPTVTSPQVAVNDIGSSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE 60 MPSP+VTSPQVAVNDIGS+EDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE Sbjct 1 MPSPSVTSPQVAVNDIGSAEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE 60 Query 61 GVIPARELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALK 120 GVIP+RELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIE LK Sbjct 61 GVIPSRELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEELK 120 Query 121 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNR 180 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNR Sbjct 121 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNR 180 Query 181 NNVVLSRRAWLEQTQSEVRSEFLNNLQKGTIRKGVVSSIVNFGAFVDLGGVDGLVHVSEL 240 NNVVLSRRAWLEQTQSEVRSEFLN L KG IRKGVVSSIVNFGAFVDLGGVDGLVHVSEL Sbjct 181 NNVVLSRRAWLEQTQSEVRSEFLNQLTKGAIRKGVVSSIVNFGAFVDLGGVDGLVHVSEL 240 Query 241 SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK 300 SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK Sbjct 241 SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK 300 Query 301 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISL 360 VTKLVPFGAFVRVEEGIEGLVHISEL+ERHVEVPDQVV VGDDAMVKVIDIDLERRRISL Sbjct 301 VTKLVPFGAFVRVEEGIEGLVHISELSERHVEVPDQVVQVGDDAMVKVIDIDLERRRISL 360 Query 361 SLKQANEDYTEEFDPAKYGMADSYDEQGNYIFPEGFDAETNEWLEGFEKQRAEWEARYAE 420 SLKQANEDY+EEF+ KYGMADSYD+QGNYIFPEGFDA+TNEWLEGFEKQR EWEARYAE Sbjct 361 SLKQANEDYSEEFEAWKYGMADSYDDQGNYIFPEGFDADTNEWLEGFEKQRDEWEARYAE 420 Query 421 AERRHKMHTAQMEKFAAAEAAGRGADDQSSASSAPSEKTAGGSLASDAQLAALREKLAGS 480 AERRHKMHTAQMEKFAAAEA SS++ A SE++AGGSLASDAQLAALREKLAG+ Sbjct 421 AERRHKMHTAQMEKFAAAEAEEAARPTSSSSNGARSEESAGGSLASDAQLAALREKLAGN 480 Query 481 A 481 A Sbjct 481 A 481 >gi|108799971|ref|YP_640168.1| 30S ribosomal protein S1 [Mycobacterium sp. MCS] gi|119869083|ref|YP_939035.1| 30S ribosomal protein S1 [Mycobacterium sp. KMS] gi|126435599|ref|YP_001071290.1| 30S ribosomal protein S1 [Mycobacterium sp. JLS] gi|108770390|gb|ABG09112.1| SSU ribosomal protein S1P [Mycobacterium sp. MCS] gi|119695172|gb|ABL92245.1| SSU ribosomal protein S1P [Mycobacterium sp. KMS] gi|126235399|gb|ABN98799.1| SSU ribosomal protein S1P [Mycobacterium sp. JLS] Length=479 Score = 891 bits (2303), Expect = 0.0, Method: Compositional matrix adjust. Identities = 450/481 (94%), Positives = 461/481 (96%), Gaps = 2/481 (0%) Query 1 MPSPTVTSPQVAVNDIGSSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE 60 MPSP TSPQVAVNDIGS+EDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE Sbjct 1 MPSPVATSPQVAVNDIGSAEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE 60 Query 61 GVIPARELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALK 120 GVIP+RELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIE LK Sbjct 61 GVIPSRELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEELK 120 Query 121 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNR 180 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNR Sbjct 121 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNR 180 Query 181 NNVVLSRRAWLEQTQSEVRSEFLNNLQKGTIRKGVVSSIVNFGAFVDLGGVDGLVHVSEL 240 NNVVLSRRAWLEQTQSEVRSEFLN LQKG IRKGVVSSIVNFGAFVDLGGVDGLVHVSEL Sbjct 181 NNVVLSRRAWLEQTQSEVRSEFLNQLQKGAIRKGVVSSIVNFGAFVDLGGVDGLVHVSEL 240 Query 241 SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK 300 SWKHIDHPSEVV VGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK Sbjct 241 SWKHIDHPSEVVTVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK 300 Query 301 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISL 360 VTKLVPFGAFVRVEEGIEGLVHISEL+ERHVEVPDQVV VGDDAMVKVIDIDLERRRISL Sbjct 301 VTKLVPFGAFVRVEEGIEGLVHISELSERHVEVPDQVVQVGDDAMVKVIDIDLERRRISL 360 Query 361 SLKQANEDYTEEFDPAKYGMADSYDEQGNYIFPEGFDAETNEWLEGFEKQRAEWEARYAE 420 SLKQANEDYTEEFDP+KYGMADSYDEQGNYIFPEGFD+ETNEWLEGFEKQR EWE+RYAE Sbjct 361 SLKQANEDYTEEFDPSKYGMADSYDEQGNYIFPEGFDSETNEWLEGFEKQREEWESRYAE 420 Query 421 AERRHKMHTAQMEKFAAAEAAGRGADDQSSASSAPSEKTAGGSLASDAQLAALREKLAGS 480 AERRHKMHTAQMEKFAAAEA A S S+ SE++ GG+LASDAQLAALREKLAG+ Sbjct 421 AERRHKMHTAQMEKFAAAEAE--EAARPVSNGSSRSEESTGGTLASDAQLAALREKLAGN 478 Query 481 A 481 A Sbjct 479 A 479 >gi|336441306|gb|AEI54878.1| 30S ribosomal protein S1 [Mycobacterium chelonae] Length=481 Score = 884 bits (2284), Expect = 0.0, Method: Compositional matrix adjust. Identities = 443/481 (93%), Positives = 456/481 (95%), Gaps = 0/481 (0%) Query 1 MPSPTVTSPQVAVNDIGSSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE 60 MPSPTVTSPQVAVNDIGS+EDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE Sbjct 1 MPSPTVTSPQVAVNDIGSAEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE 60 Query 61 GVIPARELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALK 120 GVIP+RELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIE LK Sbjct 61 GVIPSRELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEELK 120 Query 121 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNR 180 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELD+NR Sbjct 121 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDRNR 180 Query 181 NNVVLSRRAWLEQTQSEVRSEFLNNLQKGTIRKGVVSSIVNFGAFVDLGGVDGLVHVSEL 240 NNVVLSRRAWLEQTQSEVRSEFLN L KG IRKGVVSSIVNFGAFVDLGGVDGLVHVSEL Sbjct 181 NNVVLSRRAWLEQTQSEVRSEFLNQLTKGAIRKGVVSSIVNFGAFVDLGGVDGLVHVSEL 240 Query 241 SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK 300 SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK Sbjct 241 SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK 300 Query 301 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISL 360 VTKLVPFGAFVRVEEGIEGLVHISEL+ERHVEVPDQVV VGDDAMVKVIDIDLERRRISL Sbjct 301 VTKLVPFGAFVRVEEGIEGLVHISELSERHVEVPDQVVGVGDDAMVKVIDIDLERRRISL 360 Query 361 SLKQANEDYTEEFDPAKYGMADSYDEQGNYIFPEGFDAETNEWLEGFEKQRAEWEARYAE 420 SLKQANEDYTEEFDP+KYGMADSYDE GNYIFPEGFD+ETNEWLEGF+KQR EWEARYAE Sbjct 361 SLKQANEDYTEEFDPSKYGMADSYDEAGNYIFPEGFDSETNEWLEGFDKQREEWEARYAE 420 Query 421 AERRHKMHTAQMEKFAAAEAAGRGADDQSSASSAPSEKTAGGSLASDAQLAALREKLAGS 480 AERRHKMHT QMEK AAA A A + +S + + GGSLA+D QLAALREKLAG+ Sbjct 421 AERRHKMHTIQMEKSAAAAEAEAAAASSNGSSRSDDSASQGGSLANDEQLAALREKLAGN 480 Query 481 A 481 A Sbjct 481 A 481 >gi|336441308|gb|AEI54879.1| 30S ribosomal protein S1 [Mycobacterium immunogenum] Length=481 Score = 880 bits (2273), Expect = 0.0, Method: Compositional matrix adjust. Identities = 446/481 (93%), Positives = 457/481 (96%), Gaps = 0/481 (0%) Query 1 MPSPTVTSPQVAVNDIGSSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE 60 MPSPTVTSPQVAVNDIGS+EDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE Sbjct 1 MPSPTVTSPQVAVNDIGSAEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE 60 Query 61 GVIPARELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALK 120 GVIP+RELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIE LK Sbjct 61 GVIPSRELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEELK 120 Query 121 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNR 180 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELD+NR Sbjct 121 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDRNR 180 Query 181 NNVVLSRRAWLEQTQSEVRSEFLNNLQKGTIRKGVVSSIVNFGAFVDLGGVDGLVHVSEL 240 NNVVLSRRAWLEQTQSEVRSEFLN L KG IRKGVVSSIVNFGAFVDLGGVDGLVHVSEL Sbjct 181 NNVVLSRRAWLEQTQSEVRSEFLNQLTKGAIRKGVVSSIVNFGAFVDLGGVDGLVHVSEL 240 Query 241 SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK 300 SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK Sbjct 241 SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK 300 Query 301 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISL 360 VTKLVPFGAFVRVEEGIEGLVHISEL+ERHVEVPDQVV VGDDAMVKVIDIDLERRRISL Sbjct 301 VTKLVPFGAFVRVEEGIEGLVHISELSERHVEVPDQVVGVGDDAMVKVIDIDLERRRISL 360 Query 361 SLKQANEDYTEEFDPAKYGMADSYDEQGNYIFPEGFDAETNEWLEGFEKQRAEWEARYAE 420 SLKQANEDYTEEFDP+KYGMADSYDE GNYIFPEGFDAETNEWLEGF+KQR EWEARYAE Sbjct 361 SLKQANEDYTEEFDPSKYGMADSYDEAGNYIFPEGFDAETNEWLEGFDKQREEWEARYAE 420 Query 421 AERRHKMHTAQMEKFAAAEAAGRGADDQSSASSAPSEKTAGGSLASDAQLAALREKLAGS 480 AERRHKMHT QMEK AAA A A SS+S + + GGSLA+D QLAALREKLAG+ Sbjct 421 AERRHKMHTVQMEKSAAAAEAEAAAASTSSSSRSDDSGSQGGSLANDEQLAALREKLAGN 480 Query 481 A 481 A Sbjct 481 A 481 >gi|183427450|gb|ACC62511.1| S1 ribosomal protein [Mycobacterium abscessus] gi|336441304|gb|AEI54877.1| 30S ribosomal protein S1 [Mycobacterium bolletii] gi|336441310|gb|AEI54880.1| 30S ribosomal protein S1 [Mycobacterium massiliense] Length=481 Score = 880 bits (2273), Expect = 0.0, Method: Compositional matrix adjust. Identities = 446/481 (93%), Positives = 457/481 (96%), Gaps = 0/481 (0%) Query 1 MPSPTVTSPQVAVNDIGSSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE 60 MPSPTVTSPQVAVNDIGS+EDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE Sbjct 1 MPSPTVTSPQVAVNDIGSAEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE 60 Query 61 GVIPARELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALK 120 GVIP+RELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIE LK Sbjct 61 GVIPSRELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEELK 120 Query 121 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNR 180 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELD+NR Sbjct 121 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDRNR 180 Query 181 NNVVLSRRAWLEQTQSEVRSEFLNNLQKGTIRKGVVSSIVNFGAFVDLGGVDGLVHVSEL 240 NNVVLSRRAWLEQTQSEVRSEFLN L KG IRKGVVSSIVNFGAFVDLGGVDGLVHVSEL Sbjct 181 NNVVLSRRAWLEQTQSEVRSEFLNQLTKGAIRKGVVSSIVNFGAFVDLGGVDGLVHVSEL 240 Query 241 SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK 300 SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK Sbjct 241 SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK 300 Query 301 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISL 360 VTKLVPFGAFVRVEEGIEGLVHISEL+ERHVEVPDQVV VGDDAMVKVIDIDLERRRISL Sbjct 301 VTKLVPFGAFVRVEEGIEGLVHISELSERHVEVPDQVVGVGDDAMVKVIDIDLERRRISL 360 Query 361 SLKQANEDYTEEFDPAKYGMADSYDEQGNYIFPEGFDAETNEWLEGFEKQRAEWEARYAE 420 SLKQANEDYTEEFDP+KYGMADSYDE GNYIFPEGFDAETNEWLEGF+KQR EWEARYAE Sbjct 361 SLKQANEDYTEEFDPSKYGMADSYDEAGNYIFPEGFDAETNEWLEGFDKQREEWEARYAE 420 Query 421 AERRHKMHTAQMEKFAAAEAAGRGADDQSSASSAPSEKTAGGSLASDAQLAALREKLAGS 480 AERRHKMHT QMEK AAA A A SS+S + + GGSLA+D QLAALREKLAG+ Sbjct 421 AERRHKMHTVQMEKSAAAAEAEAAAASTSSSSRSDDSASQGGSLANDEQLAALREKLAGN 480 Query 481 A 481 A Sbjct 481 A 481 >gi|336441302|gb|AEI54876.1| 30S ribosomal protein S1 [Mycobacterium franklinii] Length=481 Score = 879 bits (2272), Expect = 0.0, Method: Compositional matrix adjust. Identities = 446/481 (93%), Positives = 456/481 (95%), Gaps = 0/481 (0%) Query 1 MPSPTVTSPQVAVNDIGSSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE 60 MPSPTVTSPQVAVNDIGS+EDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE Sbjct 1 MPSPTVTSPQVAVNDIGSAEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE 60 Query 61 GVIPARELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALK 120 GVIP+RELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIE LK Sbjct 61 GVIPSRELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEELK 120 Query 121 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNR 180 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELD+NR Sbjct 121 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDRNR 180 Query 181 NNVVLSRRAWLEQTQSEVRSEFLNNLQKGTIRKGVVSSIVNFGAFVDLGGVDGLVHVSEL 240 NNVVLSRRAWLEQTQSEVRSEFLN L KG IRKGVVSSIVNFGAFVDLGGVDGLVHVSEL Sbjct 181 NNVVLSRRAWLEQTQSEVRSEFLNQLTKGAIRKGVVSSIVNFGAFVDLGGVDGLVHVSEL 240 Query 241 SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK 300 SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK Sbjct 241 SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK 300 Query 301 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISL 360 VTKLVPFGAFVRVEEGIEGLVHISEL+ERHVEVPDQVV VGDDAMVKVIDIDLERRRISL Sbjct 301 VTKLVPFGAFVRVEEGIEGLVHISELSERHVEVPDQVVGVGDDAMVKVIDIDLERRRISL 360 Query 361 SLKQANEDYTEEFDPAKYGMADSYDEQGNYIFPEGFDAETNEWLEGFEKQRAEWEARYAE 420 SLKQANEDYTEEFDP+KYGMADSYDE GNYIFPEGFDAETNEWLEGF+KQR EWEARYAE Sbjct 361 SLKQANEDYTEEFDPSKYGMADSYDEAGNYIFPEGFDAETNEWLEGFDKQREEWEARYAE 420 Query 421 AERRHKMHTAQMEKFAAAEAAGRGADDQSSASSAPSEKTAGGSLASDAQLAALREKLAGS 480 AERRHKMHT QMEK AAA A A SS+S + GGSLA+D QLAALREKLAG+ Sbjct 421 AERRHKMHTVQMEKSAAAAEAEAAAASSSSSSRSEDSAPQGGSLANDEQLAALREKLAGN 480 Query 481 A 481 A Sbjct 481 A 481 >gi|118472813|ref|YP_888124.1| 30S ribosomal protein S1 [Mycobacterium smegmatis str. MC2 155] gi|118174100|gb|ABK74996.1| 30S ribosomal protein S1 [Mycobacterium smegmatis str. MC2 155] Length=479 Score = 879 bits (2271), Expect = 0.0, Method: Compositional matrix adjust. Identities = 452/481 (94%), Positives = 464/481 (97%), Gaps = 2/481 (0%) Query 1 MPSPTVTSPQVAVNDIGSSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE 60 MPSP+VTSPQVAVNDIGS+EDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE Sbjct 1 MPSPSVTSPQVAVNDIGSAEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE 60 Query 61 GVIPARELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALK 120 GVIP+RELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIE LK Sbjct 61 GVIPSRELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEELK 120 Query 121 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNR 180 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNR Sbjct 121 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNR 180 Query 181 NNVVLSRRAWLEQTQSEVRSEFLNNLQKGTIRKGVVSSIVNFGAFVDLGGVDGLVHVSEL 240 NNVVLSRRAWLEQTQSEVRSEFLN LQKG IRKGVVSSIVNFGAFVDLGGVDGLVHVSEL Sbjct 181 NNVVLSRRAWLEQTQSEVRSEFLNQLQKGAIRKGVVSSIVNFGAFVDLGGVDGLVHVSEL 240 Query 241 SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK 300 SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK Sbjct 241 SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK 300 Query 301 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISL 360 VTKLVPFGAFVRVEEGIEGLVHISEL+ERHVEVPDQVV VGDDAMVKVIDIDLERRRISL Sbjct 301 VTKLVPFGAFVRVEEGIEGLVHISELSERHVEVPDQVVQVGDDAMVKVIDIDLERRRISL 360 Query 361 SLKQANEDYTEEFDPAKYGMADSYDEQGNYIFPEGFDAETNEWLEGFEKQRAEWEARYAE 420 SLKQANEDYTEEFDP+KYGMADSYDEQGNYIFPEGFD ETNEWLEGF+KQR EWEARYAE Sbjct 361 SLKQANEDYTEEFDPSKYGMADSYDEQGNYIFPEGFDPETNEWLEGFDKQREEWEARYAE 420 Query 421 AERRHKMHTAQMEKFAAAEAAGRGADDQSSASSAPSEKTAGGSLASDAQLAALREKLAGS 480 AERRHKMHTAQMEKFAAAEA A S S+ SE+++GG+LASDAQLAALREKLAG+ Sbjct 421 AERRHKMHTAQMEKFAAAEAEAANA--PVSNGSSRSEESSGGTLASDAQLAALREKLAGN 478 Query 481 A 481 A Sbjct 479 A 479 >gi|169629382|ref|YP_001703031.1| 30S ribosomal protein S1 [Mycobacterium abscessus ATCC 19977] gi|169241349|emb|CAM62377.1| 30S ribosomal protein S1 [Mycobacterium abscessus] gi|336441300|gb|AEI54875.1| 30S ribosomal protein S1 [Mycobacterium abscessus] Length=481 Score = 879 bits (2270), Expect = 0.0, Method: Compositional matrix adjust. Identities = 445/481 (93%), Positives = 457/481 (96%), Gaps = 0/481 (0%) Query 1 MPSPTVTSPQVAVNDIGSSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE 60 MPSPTVTSPQVAVNDIGS+EDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE Sbjct 1 MPSPTVTSPQVAVNDIGSAEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE 60 Query 61 GVIPARELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALK 120 GVIP+RELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIE LK Sbjct 61 GVIPSRELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEELK 120 Query 121 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNR 180 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELD+NR Sbjct 121 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDRNR 180 Query 181 NNVVLSRRAWLEQTQSEVRSEFLNNLQKGTIRKGVVSSIVNFGAFVDLGGVDGLVHVSEL 240 NNVVLSRRAWLEQTQSEVRSEFLN L KG IRKGVVSSIVNFGAFVDLGGVDGLVHVSEL Sbjct 181 NNVVLSRRAWLEQTQSEVRSEFLNQLTKGAIRKGVVSSIVNFGAFVDLGGVDGLVHVSEL 240 Query 241 SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK 300 SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK Sbjct 241 SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK 300 Query 301 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISL 360 VTKLVPFGAFVRVEEGIEGLVHISEL+ERHVEVPDQVV VGDDAMVKVIDIDLERRRISL Sbjct 301 VTKLVPFGAFVRVEEGIEGLVHISELSERHVEVPDQVVGVGDDAMVKVIDIDLERRRISL 360 Query 361 SLKQANEDYTEEFDPAKYGMADSYDEQGNYIFPEGFDAETNEWLEGFEKQRAEWEARYAE 420 SLKQANEDYTEEFDP+KYGMADSYD+ GNYIFPEGFDAETNEWLEGF+KQR EWEARYAE Sbjct 361 SLKQANEDYTEEFDPSKYGMADSYDDAGNYIFPEGFDAETNEWLEGFDKQREEWEARYAE 420 Query 421 AERRHKMHTAQMEKFAAAEAAGRGADDQSSASSAPSEKTAGGSLASDAQLAALREKLAGS 480 AERRHKMHT QMEK AAA A A SS+S + + GGSLA+D QLAALREKLAG+ Sbjct 421 AERRHKMHTVQMEKSAAAAEAEAAAASTSSSSRSDDSASQGGSLANDEQLAALREKLAGN 480 Query 481 A 481 A Sbjct 481 A 481 >gi|262202770|ref|YP_003273978.1| RNA-binding S1 domain-containing protein [Gordonia bronchialis DSM 43247] gi|262086117|gb|ACY22085.1| RNA binding S1 domain protein [Gordonia bronchialis DSM 43247] Length=487 Score = 877 bits (2266), Expect = 0.0, Method: Compositional matrix adjust. Identities = 441/489 (91%), Positives = 460/489 (95%), Gaps = 10/489 (2%) Query 1 MPSPTVTSPQVAVNDIGSSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE 60 M SPT+TSPQVAVNDIGS+EDFLAAID TIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE Sbjct 1 MSSPTITSPQVAVNDIGSAEDFLAAIDSTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE 60 Query 61 GVIPARELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALK 120 GVIP+RELSIKHDVDPNEVV+VGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIE LK Sbjct 61 GVIPSRELSIKHDVDPNEVVNVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEELK 120 Query 121 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNR 180 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNR Sbjct 121 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNR 180 Query 181 NNVVLSRRAWLEQTQSEVRSEFLNNLQKGTIRKGVVSSIVNFGAFVDLGGVDGLVHVSEL 240 NNVVLSRRAWLEQTQSEVRSEFL+ LQKG +RKGVVSSIVNFGAFVDLGGVDGLVHVSEL Sbjct 181 NNVVLSRRAWLEQTQSEVRSEFLHQLQKGQVRKGVVSSIVNFGAFVDLGGVDGLVHVSEL 240 Query 241 SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK 300 SWKHIDHPSEVV VGDEVTVEVLDVD+DRERVSLSLKATQEDPWR FARTHAIGQIVPGK Sbjct 241 SWKHIDHPSEVVAVGDEVTVEVLDVDLDRERVSLSLKATQEDPWRQFARTHAIGQIVPGK 300 Query 301 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISL 360 VTKLVPFGAFVRV+EGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISL Sbjct 301 VTKLVPFGAFVRVDEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISL 360 Query 361 SLKQANEDYTEEFDPAKYGMADSYDEQGNYIFPEGFDAETNEWLEGFEKQRAEWEARYAE 420 SLKQANEDYTEEFDP+KYGMADSYDEQGNYIFPEGFDA+TNEWLEGFEKQR WEARYAE Sbjct 361 SLKQANEDYTEEFDPSKYGMADSYDEQGNYIFPEGFDADTNEWLEGFEKQREAWEARYAE 420 Query 421 AERRHKMHTAQMEKFAAAEAA--------GRGADDQSSASSAPSEKTAGGSLASDAQLAA 472 AERRHKMHTAQMEKFAAA A ++ + + S+AP+ + GGSLASD QLAA Sbjct 421 AERRHKMHTAQMEKFAAAAAEAANAPSDYSSASESRGTGSNAPA--STGGSLASDEQLAA 478 Query 473 LREKLAGSA 481 LREKL+G+A Sbjct 479 LREKLSGNA 487 >gi|343927330|ref|ZP_08766804.1| 30S ribosomal protein S1 [Gordonia alkanivorans NBRC 16433] gi|343762757|dbj|GAA13730.1| 30S ribosomal protein S1 [Gordonia alkanivorans NBRC 16433] Length=489 Score = 875 bits (2260), Expect = 0.0, Method: Compositional matrix adjust. Identities = 440/496 (89%), Positives = 458/496 (93%), Gaps = 22/496 (4%) Query 1 MPSPTVTSPQVAVNDIGSSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE 60 M SPT+TSPQVA+NDIG++EDFLAAID TIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE Sbjct 1 MSSPTITSPQVAINDIGTAEDFLAAIDSTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE 60 Query 61 GVIPARELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALK 120 GVIP+RELSIKHDVDPNEVV+VGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIE LK Sbjct 61 GVIPSRELSIKHDVDPNEVVNVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEELK 120 Query 121 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNR 180 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNR Sbjct 121 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNR 180 Query 181 NNVVLSRRAWLEQTQSEVRSEFLNNLQKGTIRKGVVSSIVNFGAFVDLGGVDGLVHVSEL 240 NNVVLSRRAWLEQTQSEVRSEFL+ LQKG +RKGVVSSIVNFGAFVDLGGVDGLVHVSEL Sbjct 181 NNVVLSRRAWLEQTQSEVRSEFLHQLQKGQVRKGVVSSIVNFGAFVDLGGVDGLVHVSEL 240 Query 241 SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK 300 SWKHIDHPSEVV VGDEVTVEVLDVD+DRERVSLSLKATQEDPWR FARTHAIGQIVPGK Sbjct 241 SWKHIDHPSEVVAVGDEVTVEVLDVDLDRERVSLSLKATQEDPWRQFARTHAIGQIVPGK 300 Query 301 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISL 360 VTKLVPFGAFVRV+EGIEGLVHISELAERHVEVPDQVVAV DDAMVKVIDIDLERRRISL Sbjct 301 VTKLVPFGAFVRVDEGIEGLVHISELAERHVEVPDQVVAVNDDAMVKVIDIDLERRRISL 360 Query 361 SLKQANEDYTEEFDPAKYGMADSYDEQGNYIFPEGFDAETNEWLEGFEKQRAEWEARYAE 420 SLKQANEDYTEEFDP+KYGMADSYDEQGNYIFPEGFDAETNEWLEGFEKQR WEARYAE Sbjct 361 SLKQANEDYTEEFDPSKYGMADSYDEQGNYIFPEGFDAETNEWLEGFEKQREAWEARYAE 420 Query 421 AERRHKMHTAQMEKF---------------AAAEAAGRGADDQSSASSAPSEKTAGGSLA 465 AERRHKMHTAQMEKF +A+E+ G G+ + S ASS GGSLA Sbjct 421 AERRHKMHTAQMEKFAAAAAEAANAPTDYSSASESRG-GSANTSGASS------TGGSLA 473 Query 466 SDAQLAALREKLAGSA 481 SD QLAALREKL+G+A Sbjct 474 SDEQLAALREKLSGNA 489 >gi|145224145|ref|YP_001134823.1| 30S ribosomal protein S1 [Mycobacterium gilvum PYR-GCK] gi|315444481|ref|YP_004077360.1| 30S ribosomal protein S1P [Mycobacterium sp. Spyr1] gi|145216631|gb|ABP46035.1| SSU ribosomal protein S1P [Mycobacterium gilvum PYR-GCK] gi|315262784|gb|ADT99525.1| SSU ribosomal protein S1P [Mycobacterium sp. Spyr1] Length=481 Score = 872 bits (2254), Expect = 0.0, Method: Compositional matrix adjust. Identities = 448/481 (94%), Positives = 459/481 (96%), Gaps = 0/481 (0%) Query 1 MPSPTVTSPQVAVNDIGSSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE 60 MPSP+VTSPQVAVNDIGS+EDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE Sbjct 1 MPSPSVTSPQVAVNDIGSAEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE 60 Query 61 GVIPARELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALK 120 GVIP+RELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIE LK Sbjct 61 GVIPSRELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEELK 120 Query 121 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNR 180 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNR Sbjct 121 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNR 180 Query 181 NNVVLSRRAWLEQTQSEVRSEFLNNLQKGTIRKGVVSSIVNFGAFVDLGGVDGLVHVSEL 240 NNVVLSRRAWLEQTQSEVRSEFLN L KG IRKGVVSSIVNFGAFVDLGGVDGLVHVSEL Sbjct 181 NNVVLSRRAWLEQTQSEVRSEFLNQLTKGAIRKGVVSSIVNFGAFVDLGGVDGLVHVSEL 240 Query 241 SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK 300 SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK Sbjct 241 SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK 300 Query 301 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISL 360 VTKLVPFGAFVRVEEGIEGLVHISEL+ERHVEVPDQVV VGDDAMVKVIDIDLERRRISL Sbjct 301 VTKLVPFGAFVRVEEGIEGLVHISELSERHVEVPDQVVQVGDDAMVKVIDIDLERRRISL 360 Query 361 SLKQANEDYTEEFDPAKYGMADSYDEQGNYIFPEGFDAETNEWLEGFEKQRAEWEARYAE 420 SLKQANEDY+EEF+ KYGMADSYD+QGNYIFPEGFDA+TNEWLEGFEKQR EWEARYAE Sbjct 361 SLKQANEDYSEEFEAWKYGMADSYDDQGNYIFPEGFDADTNEWLEGFEKQRDEWEARYAE 420 Query 421 AERRHKMHTAQMEKFAAAEAAGRGADDQSSASSAPSEKTAGGSLASDAQLAALREKLAGS 480 AERRHKMHTAQMEKFAAAEA S+ SS E + GGSLASDAQLAALREKLAG+ Sbjct 421 AERRHKMHTAQMEKFAAAEAEEAAKPASSNGSSRSEESSGGGSLASDAQLAALREKLAGN 480 Query 481 A 481 A Sbjct 481 A 481 >gi|312139898|ref|YP_004007234.1| 30S ribosomal protein s1 rpsa [Rhodococcus equi 103S] gi|311889237|emb|CBH48551.1| 30S ribosomal protein S1 RpsA [Rhodococcus equi 103S] Length=490 Score = 872 bits (2253), Expect = 0.0, Method: Compositional matrix adjust. Identities = 436/490 (89%), Positives = 455/490 (93%), Gaps = 9/490 (1%) Query 1 MPSPTVTSPQVAVNDIGSSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE 60 MPS TVTSPQVAVNDIGS+EDFLAAID TIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE Sbjct 1 MPSNTVTSPQVAVNDIGSAEDFLAAIDATIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE 60 Query 61 GVIPARELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALK 120 GVIP+RELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIE LK Sbjct 61 GVIPSRELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEELK 120 Query 121 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNR 180 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPY+GKEIEAKIIELDKNR Sbjct 121 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYVGKEIEAKIIELDKNR 180 Query 181 NNVVLSRRAWLEQTQSEVRSEFLNNLQKGTIRKGVVSSIVNFGAFVDLGGVDGLVHVSEL 240 NNVVLSRRAWLEQTQSEVRSEFL+ LQKG +RKGVVSSIVNFGAFVDLGGVDGLVHVSEL Sbjct 181 NNVVLSRRAWLEQTQSEVRSEFLHQLQKGQVRKGVVSSIVNFGAFVDLGGVDGLVHVSEL 240 Query 241 SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK 300 SWKHIDHPSEVV+VG+EVTVEVLDVD+DRERVSLSLKATQEDPWR FARTHAIGQIVPGK Sbjct 241 SWKHIDHPSEVVEVGNEVTVEVLDVDLDRERVSLSLKATQEDPWRQFARTHAIGQIVPGK 300 Query 301 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISL 360 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVV VGDDA+VKVIDIDLERRRISL Sbjct 301 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVGVGDDALVKVIDIDLERRRISL 360 Query 361 SLKQANEDYTEEFDPAKYGMADSYDEQGNYIFPEGFDAETNEWLEGFEKQRAEWEARYAE 420 SLKQANEDY EFDP+KYGMADSYDEQGNYIFPEGFD ETNEWLEGF+KQR EWE+RYAE Sbjct 361 SLKQANEDYNAEFDPSKYGMADSYDEQGNYIFPEGFDPETNEWLEGFDKQREEWESRYAE 420 Query 421 AERRHKMHTAQMEKF---------AAAEAAGRGADDQSSASSAPSEKTAGGSLASDAQLA 471 AERRHKMHTAQMEK A A ++ S +A S ++AGGSLASDAQLA Sbjct 421 AERRHKMHTAQMEKMAADEAAEAAAGASGTNYSSESGSDEGAAASTESAGGSLASDAQLA 480 Query 472 ALREKLAGSA 481 ALREKL+G+A Sbjct 481 ALREKLSGNA 490 >gi|325674222|ref|ZP_08153911.1| 30S ribosomal protein S1 [Rhodococcus equi ATCC 33707] gi|325554902|gb|EGD24575.1| 30S ribosomal protein S1 [Rhodococcus equi ATCC 33707] Length=528 Score = 871 bits (2250), Expect = 0.0, Method: Compositional matrix adjust. Identities = 436/490 (89%), Positives = 455/490 (93%), Gaps = 9/490 (1%) Query 1 MPSPTVTSPQVAVNDIGSSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE 60 MPS TVTSPQVAVNDIGS+EDFLAAID TIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE Sbjct 39 MPSNTVTSPQVAVNDIGSAEDFLAAIDATIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE 98 Query 61 GVIPARELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALK 120 GVIP+RELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIE LK Sbjct 99 GVIPSRELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEELK 158 Query 121 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNR 180 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPY+GKEIEAKIIELDKNR Sbjct 159 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYVGKEIEAKIIELDKNR 218 Query 181 NNVVLSRRAWLEQTQSEVRSEFLNNLQKGTIRKGVVSSIVNFGAFVDLGGVDGLVHVSEL 240 NNVVLSRRAWLEQTQSEVRSEFL+ LQKG +RKGVVSSIVNFGAFVDLGGVDGLVHVSEL Sbjct 219 NNVVLSRRAWLEQTQSEVRSEFLHQLQKGQVRKGVVSSIVNFGAFVDLGGVDGLVHVSEL 278 Query 241 SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK 300 SWKHIDHPSEVV+VG+EVTVEVLDVD+DRERVSLSLKATQEDPWR FARTHAIGQIVPGK Sbjct 279 SWKHIDHPSEVVEVGNEVTVEVLDVDLDRERVSLSLKATQEDPWRQFARTHAIGQIVPGK 338 Query 301 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISL 360 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVV VGDDA+VKVIDIDLERRRISL Sbjct 339 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVGVGDDALVKVIDIDLERRRISL 398 Query 361 SLKQANEDYTEEFDPAKYGMADSYDEQGNYIFPEGFDAETNEWLEGFEKQRAEWEARYAE 420 SLKQANEDY EFDP+KYGMADSYDEQGNYIFPEGFD ETNEWLEGF+KQR EWE+RYAE Sbjct 399 SLKQANEDYNAEFDPSKYGMADSYDEQGNYIFPEGFDPETNEWLEGFDKQREEWESRYAE 458 Query 421 AERRHKMHTAQMEKF---------AAAEAAGRGADDQSSASSAPSEKTAGGSLASDAQLA 471 AERRHKMHTAQMEK A A ++ S +A S ++AGGSLASDAQLA Sbjct 459 AERRHKMHTAQMEKMAADEAAEAAAGASGTNYSSESGSDEGAAASTESAGGSLASDAQLA 518 Query 472 ALREKLAGSA 481 ALREKL+G+A Sbjct 519 ALREKLSGNA 528 >gi|54023865|ref|YP_118107.1| 30S ribosomal protein S1 [Nocardia farcinica IFM 10152] gi|54015373|dbj|BAD56743.1| putative ribosomal protein S1 [Nocardia farcinica IFM 10152] Length=487 Score = 870 bits (2247), Expect = 0.0, Method: Compositional matrix adjust. Identities = 439/488 (90%), Positives = 458/488 (94%), Gaps = 8/488 (1%) Query 1 MPSPTVTSPQVAVNDIGSSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE 60 MP+ TVTSPQVAVNDIGS+EDFLAAID TIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE Sbjct 1 MPT-TVTSPQVAVNDIGSAEDFLAAIDATIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE 59 Query 61 GVIPARELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALK 120 GVIP+RELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIE LK Sbjct 60 GVIPSRELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEELK 119 Query 121 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNR 180 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPY+GKEIEAKIIELDKNR Sbjct 120 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYVGKEIEAKIIELDKNR 179 Query 181 NNVVLSRRAWLEQTQSEVRSEFLNNLQKGTIRKGVVSSIVNFGAFVDLGGVDGLVHVSEL 240 NNVVLSRRAWLEQTQSEVRSEFL+ LQKG +RKGVVSSIVNFGAFVDLGGVDGLVHVSEL Sbjct 180 NNVVLSRRAWLEQTQSEVRSEFLHQLQKGQVRKGVVSSIVNFGAFVDLGGVDGLVHVSEL 239 Query 241 SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK 300 SWKHIDHPSEVV+VG+EVTVEVLDVD+DRERVSLSLKATQEDPWR FARTHAIGQIVPGK Sbjct 240 SWKHIDHPSEVVEVGNEVTVEVLDVDLDRERVSLSLKATQEDPWRQFARTHAIGQIVPGK 299 Query 301 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISL 360 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISL Sbjct 300 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISL 359 Query 361 SLKQANEDYTEEFDPAKYGMADSYDEQGNYIFPEGFDAETNEWLEGFEKQRAEWEARYAE 420 SLKQANEDY+ EFDP+KYGMADSYDEQGNYIFPEGFD ETNEWLEG+EKQR EWE+RYAE Sbjct 360 SLKQANEDYSPEFDPSKYGMADSYDEQGNYIFPEGFDPETNEWLEGYEKQRDEWESRYAE 419 Query 421 AERRHKMHTAQMEKFAAAEAAGRG-------ADDQSSASSAPSEKTAGGSLASDAQLAAL 473 AERRHKMHTAQMEK AA AA + + + SSA + AGGSLASDAQLAAL Sbjct 420 AERRHKMHTAQMEKMAADAAAEAANGGGGNYSSESGAQSSAGQSEPAGGSLASDAQLAAL 479 Query 474 REKLAGSA 481 REKL+G+A Sbjct 480 REKLSGNA 487 >gi|326382653|ref|ZP_08204344.1| 30S ribosomal protein S1 [Gordonia neofelifaecis NRRL B-59395] gi|326198772|gb|EGD55955.1| 30S ribosomal protein S1 [Gordonia neofelifaecis NRRL B-59395] Length=490 Score = 863 bits (2230), Expect = 0.0, Method: Compositional matrix adjust. Identities = 434/492 (89%), Positives = 459/492 (94%), Gaps = 13/492 (2%) Query 1 MPSPTVTSPQVAVNDIGSSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE 60 M SPT++SPQVAVNDIGS+EDFLAA+D TIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE Sbjct 1 MSSPTISSPQVAVNDIGSAEDFLAAVDSTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE 60 Query 61 GVIPARELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALK 120 GVIP+RELSIKHDVDPNEVV+VGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIE LK Sbjct 61 GVIPSRELSIKHDVDPNEVVTVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEELK 120 Query 121 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNR 180 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKE+EAKIIELDKNR Sbjct 121 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEVEAKIIELDKNR 180 Query 181 NNVVLSRRAWLEQTQSEVRSEFLNNLQKGTIRKGVVSSIVNFGAFVDLGGVDGLVHVSEL 240 NNVVLSRRAWLEQTQSEVRSEFLN LQKG +RKGVVSSIVNFGAFVDLGGVDGLVHVSEL Sbjct 181 NNVVLSRRAWLEQTQSEVRSEFLNQLQKGQVRKGVVSSIVNFGAFVDLGGVDGLVHVSEL 240 Query 241 SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK 300 SWKHIDHPSEVV VGDEVTVEVLDVDMDRERVSLSLKATQEDPWR FARTHAIGQIVPGK Sbjct 241 SWKHIDHPSEVVTVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRQFARTHAIGQIVPGK 300 Query 301 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISL 360 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVV+VGDDAMVKVIDIDL+RRRISL Sbjct 301 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVSVGDDAMVKVIDIDLDRRRISL 360 Query 361 SLKQANEDYTEEFDPAKYGMADSYDEQGNYIFPEGFDAETNEWLEGFEKQRAEWEARYAE 420 SLKQANEDYTEEFDP+KYGMADSYD+QGNYIFPEGFDAETNEWLEG++KQR EWEARYAE Sbjct 361 SLKQANEDYTEEFDPSKYGMADSYDDQGNYIFPEGFDAETNEWLEGYDKQREEWEARYAE 420 Query 421 AERRHKMHTAQMEKF-----------AAAEAAGRGADDQSSASSAPSEKTAGGSLASDAQ 469 AERRHK+HTAQ+EKF + ++ A +S+SS P++ GGSLASD Q Sbjct 421 AERRHKLHTAQIEKFAAAAAEAENAPSDYSSSSSSASQSTSSSSGPAQ--TGGSLASDEQ 478 Query 470 LAALREKLAGSA 481 LAALREKL+G+A Sbjct 479 LAALREKLSGNA 490 >gi|333919158|ref|YP_004492739.1| RNA binding S1 domain-containing protein [Amycolicicoccus subflavus DQS3-9A1] gi|333481379|gb|AEF39939.1| RNA binding S1 domain protein [Amycolicicoccus subflavus DQS3-9A1] Length=489 Score = 859 bits (2219), Expect = 0.0, Method: Compositional matrix adjust. Identities = 431/489 (89%), Positives = 450/489 (93%), Gaps = 8/489 (1%) Query 1 MPSPTVTSPQVAVNDIGSSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE 60 MP+ T TSPQVA+NDIGS+E+FLAA+D TIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE Sbjct 1 MPTTTTTSPQVAINDIGSAEEFLAAVDATIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE 60 Query 61 GVIPARELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALK 120 GVIP+RELSIKHDVDP+EVV+VGDEVEALVLTKEDK+GRLILSKKRAQYERAWGTIE LK Sbjct 61 GVIPSRELSIKHDVDPSEVVNVGDEVEALVLTKEDKDGRLILSKKRAQYERAWGTIEELK 120 Query 121 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNR 180 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPY+GKEIEAKIIELDKNR Sbjct 121 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYVGKEIEAKIIELDKNR 180 Query 181 NNVVLSRRAWLEQTQSEVRSEFLNNLQKGTIRKGVVSSIVNFGAFVDLGGVDGLVHVSEL 240 NNVVLSRRAWLEQTQSEVRSEFL+ LQK +RKGVVSSIVNFGAFVDLGGVDGLVHVSEL Sbjct 181 NNVVLSRRAWLEQTQSEVRSEFLHQLQKSQVRKGVVSSIVNFGAFVDLGGVDGLVHVSEL 240 Query 241 SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK 300 SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWR FARTHAIGQIVPGK Sbjct 241 SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRQFARTHAIGQIVPGK 300 Query 301 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISL 360 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAV DDAMVKVIDIDLERRRISL Sbjct 301 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVNDDAMVKVIDIDLERRRISL 360 Query 361 SLKQANEDYTEEFDPAKYGMADSYDEQGNYIFPEGFDAETNEWLEGFEKQRAEWEARYAE 420 SLKQANE+YTEEFDPAKYGMADSYDE GNYIFPEGFD ETNEWLEGFEKQR EWEARYAE Sbjct 361 SLKQANEEYTEEFDPAKYGMADSYDEAGNYIFPEGFDPETNEWLEGFEKQREEWEARYAE 420 Query 421 AERRHKMHTAQMEKFAAAEAAGRGADDQSSASSA--------PSEKTAGGSLASDAQLAA 472 AERRHKMHT QMEKFA EA A + +S + +GG+LASD QLAA Sbjct 421 AERRHKMHTTQMEKFAKVEAEAAEAAPSNYSSDGAAQAPAASAAPAQSGGTLASDEQLAA 480 Query 473 LREKLAGSA 481 LREKL+G A Sbjct 481 LREKLSGGA 489 >gi|296140136|ref|YP_003647379.1| RNA binding S1 domain-containing protein [Tsukamurella paurometabola DSM 20162] gi|296028270|gb|ADG79040.1| RNA binding S1 domain protein [Tsukamurella paurometabola DSM 20162] Length=499 Score = 851 bits (2198), Expect = 0.0, Method: Compositional matrix adjust. Identities = 438/501 (88%), Positives = 455/501 (91%), Gaps = 22/501 (4%) Query 1 MPSPTVTSPQVAVNDIGSSEDFLAAIDKTIKYFNDGDIVEGTIV-----KVDRDEVLLDI 55 MP+ TVTSPQVAVNDIGS+EDFLAAID TIKYFNDGDIVEGTIV KVDRDEVLLDI Sbjct 1 MPTSTVTSPQVAVNDIGSAEDFLAAIDATIKYFNDGDIVEGTIVEGTIVKVDRDEVLLDI 60 Query 56 GYKTEGVIPARELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGT 115 GYKTEGVIP+RELSIKHDVDP+EVV+VGD VEALVLTKEDKEGRLILSKKRAQYERAWGT Sbjct 61 GYKTEGVIPSRELSIKHDVDPSEVVNVGDAVEALVLTKEDKEGRLILSKKRAQYERAWGT 120 Query 116 IEALKEKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIE 175 IE LKEKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIE Sbjct 121 IEELKEKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIE 180 Query 176 LDKNRNNVVLSRRAWLEQTQSEVRSEFLNNLQKGTIRKGVVSSIVNFGAFVDLGGVDGLV 235 LDKNRNNVVLSRRAWLEQTQSEVRSEFL+ LQKG +RKGVVSSIVNFGAFVDLGGVDGLV Sbjct 181 LDKNRNNVVLSRRAWLEQTQSEVRSEFLHQLQKGQVRKGVVSSIVNFGAFVDLGGVDGLV 240 Query 236 HVSELSWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQ 295 HVSELSWKHIDHPSEVV VGDEVTVEVLDVD+DRERVSLSLKATQEDPWR FARTHAIGQ Sbjct 241 HVSELSWKHIDHPSEVVTVGDEVTVEVLDVDLDRERVSLSLKATQEDPWRQFARTHAIGQ 300 Query 296 IVPGKVTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLER 355 IVPGKVTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVV+VGDDAMVKVIDIDLER Sbjct 301 IVPGKVTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVSVGDDAMVKVIDIDLER 360 Query 356 RRISLSLKQANEDYTEEFDPAKYGMADSYDEQGNYIFPEGFDAETNEWLEGFEKQRAEWE 415 RRISLSLKQANEDYTEEFDP+KYGMADSYDE G YIFPEGFD ETNEWLEGF+KQR EWE Sbjct 361 RRISLSLKQANEDYTEEFDPSKYGMADSYDENGEYIFPEGFDPETNEWLEGFDKQREEWE 420 Query 416 ARYAEAERRHKMHTAQMEKFAAAEAAGRGADDQSS---------------ASSAPSEKTA 460 RYAEAERRHKMHTAQMEKFAA EAA A ++ AP ++ Sbjct 421 GRYAEAERRHKMHTAQMEKFAADEAAEAAAGGPAAGGANYSSESTSSSDRGEDAP--QST 478 Query 461 GGSLASDAQLAALREKLAGSA 481 GGSLASDAQLAALREKL+G+A Sbjct 479 GGSLASDAQLAALREKLSGNA 499 >gi|237785408|ref|YP_002906113.1| 30S ribosomal protein S1 [Corynebacterium kroppenstedtii DSM 44385] gi|237758320|gb|ACR17570.1| 30S ribosomal protein S1 [Corynebacterium kroppenstedtii DSM 44385] Length=488 Score = 838 bits (2165), Expect = 0.0, Method: Compositional matrix adjust. Identities = 421/484 (87%), Positives = 448/484 (93%), Gaps = 8/484 (1%) Query 4 PTVTSPQVAVNDIGSSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTEGVI 63 PT T+PQVAVNDIGS+EDFLAAID TIKYFNDGDIVEGT+VK+D DEVLLDIGYKTEGVI Sbjct 2 PTSTTPQVAVNDIGSTEDFLAAIDSTIKYFNDGDIVEGTVVKIDHDEVLLDIGYKTEGVI 61 Query 64 PARELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALKEKD 123 P+RELSIKH++DPNEVV VGDE++ALVLTKEDKEGRLILSKKRAQYERAWGTIE LKEKD Sbjct 62 PSRELSIKHEIDPNEVVEVGDEIDALVLTKEDKEGRLILSKKRAQYERAWGTIEELKEKD 121 Query 124 EAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNRNNV 183 E V GTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIG+E+EAKIIELDK+RNNV Sbjct 122 EPVTGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGQELEAKIIELDKHRNNV 181 Query 184 VLSRRAWLEQTQSEVRSEFLNNLQKGTIRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWK 243 VLSRRAWLEQTQSEVRSEFL+ LQKG +RKGVVSSIVNFGAFVDLGGVDGLVHVSELSWK Sbjct 182 VLSRRAWLEQTQSEVRSEFLHQLQKGQVRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWK 241 Query 244 HIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGKVTK 303 HIDHPSEVV VGDEVTVEVLDVDMDRERVSLSLKATQEDPWR FARTHAIGQIVPGKVTK Sbjct 242 HIDHPSEVVAVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRVFARTHAIGQIVPGKVTK 301 Query 304 LVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISLSLK 363 LVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVV VG++ MVKVIDIDLERRRISLSLK Sbjct 302 LVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVNVGEEVMVKVIDIDLERRRISLSLK 361 Query 364 QANEDYTEEFDPAKYGMADSYDEQGNYIFPEGFDAETNEWLEGFEKQRAEWEARYAEAER 423 QA+EDYTEEFDP+KYGMADSYDEQGNYIFPEGFD ETNEWLEGFE+QRAEWEARYAE+ER Sbjct 362 QADEDYTEEFDPSKYGMADSYDEQGNYIFPEGFDPETNEWLEGFEEQRAEWEARYAESER 421 Query 424 RHKMHTAQMEKF-----AAAEAAGRGADDQSSASSAPSEKTAG---GSLASDAQLAALRE 475 RH+MHTAQ+E+ A EAA G +S SAP+E++A GSLASD QLA LRE Sbjct 422 RHEMHTAQIERHRAGAAEAKEAAASGYSSESEGDSAPAEESAADDSGSLASDEQLAKLRE 481 Query 476 KLAG 479 KLAG Sbjct 482 KLAG 485 >gi|229492760|ref|ZP_04386561.1| 30S ribosomal protein S1 [Rhodococcus erythropolis SK121] gi|229320419|gb|EEN86239.1| 30S ribosomal protein S1 [Rhodococcus erythropolis SK121] Length=495 Score = 832 bits (2148), Expect = 0.0, Method: Compositional matrix adjust. Identities = 433/495 (88%), Positives = 454/495 (92%), Gaps = 14/495 (2%) Query 1 MPSPTVTSPQVAVNDIGSSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE 60 MPS TVTSPQVA+NDIGS+EDFLAAID TIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE Sbjct 1 MPSTTVTSPQVAINDIGSAEDFLAAIDATIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE 60 Query 61 GVIPARELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALK 120 GVIP+RELSIKHDVDPNEVVSVGD VEALVLTKEDKEGRLILSKKRAQYERAWGTIE LK Sbjct 61 GVIPSRELSIKHDVDPNEVVSVGDAVEALVLTKEDKEGRLILSKKRAQYERAWGTIEELK 120 Query 121 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNR 180 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPY+GKEIEAKIIELDKNR Sbjct 121 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYVGKEIEAKIIELDKNR 180 Query 181 NNVVLSRRAWLEQTQSEVRSEFLNNLQKGTIRKGVVSSIVNFGAFVDLGGVDGLVHVSEL 240 NNVVLSRRAWLEQTQSEVRSEFL+ LQKG +RKGVVSSIVNFGAFVDLGGVDGLVHVSEL Sbjct 181 NNVVLSRRAWLEQTQSEVRSEFLHQLQKGQVRKGVVSSIVNFGAFVDLGGVDGLVHVSEL 240 Query 241 SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK 300 SWKHIDHPSEVV+VG EVTVEVLDVD+DRERVSLSLKATQEDPWR FARTHAIGQIVPGK Sbjct 241 SWKHIDHPSEVVEVGTEVTVEVLDVDLDRERVSLSLKATQEDPWRQFARTHAIGQIVPGK 300 Query 301 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISL 360 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVV VGDDA+VKVIDIDLERRRISL Sbjct 301 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVGVGDDALVKVIDIDLERRRISL 360 Query 361 SLKQANEDYTEEFDPAKYGMADSYDEQGNYIFPEGFDAETNEWLEGFEKQRAEWEARYAE 420 SLKQANEDY EFDP+KYGMADSYDEQGNYIFPEGFD ETNEWLEGF+KQR EWE RYAE Sbjct 361 SLKQANEDYNAEFDPSKYGMADSYDEQGNYIFPEGFDPETNEWLEGFDKQREEWENRYAE 420 Query 421 AERRHKMHTAQMEKFA--------------AAEAAGRGADDQSSASSAPSEKTAGGSLAS 466 AERRHKMHTAQMEK A ++E A + +A+ + ++AGGSLAS Sbjct 421 AERRHKMHTAQMEKTAADEAAEAATAAAGYSSETAAADDAEAPAAAGSAPAESAGGSLAS 480 Query 467 DAQLAALREKLAGSA 481 DAQLAALREKL+G+A Sbjct 481 DAQLAALREKLSGNA 495 >gi|226306799|ref|YP_002766759.1| 30S ribosomal protein S1 [Rhodococcus erythropolis PR4] gi|226185916|dbj|BAH34020.1| probable 30S ribosomal protein S1 [Rhodococcus erythropolis PR4] Length=495 Score = 830 bits (2144), Expect = 0.0, Method: Compositional matrix adjust. Identities = 432/495 (88%), Positives = 453/495 (92%), Gaps = 14/495 (2%) Query 1 MPSPTVTSPQVAVNDIGSSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE 60 MPS TVTSPQVA+NDIGS+EDFLAAID TIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE Sbjct 1 MPSTTVTSPQVAINDIGSAEDFLAAIDATIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE 60 Query 61 GVIPARELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALK 120 GVIP+RELSIKHDVDPNEVVSVGD VEALVLTKEDKEGRLILSKKRAQYERAWGTIE LK Sbjct 61 GVIPSRELSIKHDVDPNEVVSVGDAVEALVLTKEDKEGRLILSKKRAQYERAWGTIEELK 120 Query 121 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNR 180 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPY+GKEIEAKIIELDKNR Sbjct 121 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYVGKEIEAKIIELDKNR 180 Query 181 NNVVLSRRAWLEQTQSEVRSEFLNNLQKGTIRKGVVSSIVNFGAFVDLGGVDGLVHVSEL 240 NNVVLSRRAWLEQTQSEVRSEFL+ LQKG +RKGVVSSIVNFGAFVDLGGVDGLVHVSEL Sbjct 181 NNVVLSRRAWLEQTQSEVRSEFLHQLQKGQVRKGVVSSIVNFGAFVDLGGVDGLVHVSEL 240 Query 241 SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK 300 SWKHIDHPSEVV+VG EVTVEVLDVD+DRERVSLSLKATQEDPWR FARTHAIGQIVPGK Sbjct 241 SWKHIDHPSEVVEVGTEVTVEVLDVDLDRERVSLSLKATQEDPWRQFARTHAIGQIVPGK 300 Query 301 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISL 360 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVV VGDDA+VKVIDIDLERRRISL Sbjct 301 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVGVGDDALVKVIDIDLERRRISL 360 Query 361 SLKQANEDYTEEFDPAKYGMADSYDEQGNYIFPEGFDAETNEWLEGFEKQRAEWEARYAE 420 SLKQANEDY EFDP+KYGMADSYDEQGNYIFPEGFD ETNEWLEGF+KQR EWE RYAE Sbjct 361 SLKQANEDYNAEFDPSKYGMADSYDEQGNYIFPEGFDPETNEWLEGFDKQREEWENRYAE 420 Query 421 AERRHKMHTAQMEKFA--------------AAEAAGRGADDQSSASSAPSEKTAGGSLAS 466 AERRHKMHT QMEK A ++E A + +A+ + ++AGGSLAS Sbjct 421 AERRHKMHTTQMEKTAADEAAEAATAAAGYSSETAAADDAEAPAAAGSAPAESAGGSLAS 480 Query 467 DAQLAALREKLAGSA 481 DAQLAALREKL+G+A Sbjct 481 DAQLAALREKLSGNA 495 >gi|111017993|ref|YP_700965.1| 30S ribosomal protein S1 [Rhodococcus jostii RHA1] gi|110817523|gb|ABG92807.1| 30S ribosomal protein S1 [Rhodococcus jostii RHA1] Length=494 Score = 828 bits (2138), Expect = 0.0, Method: Compositional matrix adjust. Identities = 438/494 (89%), Positives = 457/494 (93%), Gaps = 13/494 (2%) Query 1 MPSPTVTSPQVAVNDIGSSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE 60 MPS TVTSPQVAVNDIGS+EDFLAAID TIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE Sbjct 1 MPSTTVTSPQVAVNDIGSAEDFLAAIDATIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE 60 Query 61 GVIPARELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALK 120 GVIP+RELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIE LK Sbjct 61 GVIPSRELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEELK 120 Query 121 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNR 180 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPY+GKEIEAKIIELDKNR Sbjct 121 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYVGKEIEAKIIELDKNR 180 Query 181 NNVVLSRRAWLEQTQSEVRSEFLNNLQKGTIRKGVVSSIVNFGAFVDLGGVDGLVHVSEL 240 NNVVLSRRAWLEQTQSEVRSEFL+ LQKG +RKG+VSSIVNFGAFVDLGGVDGLVHVSEL Sbjct 181 NNVVLSRRAWLEQTQSEVRSEFLHQLQKGQVRKGIVSSIVNFGAFVDLGGVDGLVHVSEL 240 Query 241 SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK 300 SWKHIDHPSEVV+VG EVTVEVLDVD+DRERVSLSLKATQEDPWR FARTHAIGQIVPGK Sbjct 241 SWKHIDHPSEVVEVGTEVTVEVLDVDLDRERVSLSLKATQEDPWRQFARTHAIGQIVPGK 300 Query 301 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISL 360 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVV V DDA+VKVIDIDLERRRISL Sbjct 301 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVGVNDDALVKVIDIDLERRRISL 360 Query 361 SLKQANEDYTEEFDPAKYGMADSYDEQGNYIFPEGFDAETNEWLEGFEKQRAEWEARYAE 420 SLKQANEDY EFDP+KYGMADSYDEQGNYIFPEGFD ETNEWLEGF+KQR EWE RYAE Sbjct 361 SLKQANEDYNAEFDPSKYGMADSYDEQGNYIFPEGFDPETNEWLEGFDKQREEWENRYAE 420 Query 421 AERRHKMHTAQMEKFAA-------------AEAAGRGADDQSSASSAPSEKTAGGSLASD 467 AERRHKMHTAQMEK AA + +G G D +SA+S S ++AGGSLASD Sbjct 421 AERRHKMHTAQMEKTAADEAAEAATAAAGYSSESGAGDADVASAASTSSSESAGGSLASD 480 Query 468 AQLAALREKLAGSA 481 AQLAALREKL+G+A Sbjct 481 AQLAALREKLSGNA 494 >gi|334563708|ref|ZP_08516699.1| 30S ribosomal protein S1 [Corynebacterium bovis DSM 20582] Length=488 Score = 825 bits (2131), Expect = 0.0, Method: Compositional matrix adjust. Identities = 416/486 (86%), Positives = 441/486 (91%), Gaps = 8/486 (1%) Query 4 PTVTSPQVAVNDIGSSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTEGVI 63 PT PQVAVNDIGS+EDFLAA+D TIKYFNDGDIVEGT+VKVD DEVLLDIGYKTEGVI Sbjct 2 PTNNVPQVAVNDIGSAEDFLAAVDSTIKYFNDGDIVEGTVVKVDHDEVLLDIGYKTEGVI 61 Query 64 PARELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALKEKD 123 P+RELSIKHDVDP+EVV VGDE++ALVLTKEDKEGRLILSKKRAQYERAWG IE LKEKD Sbjct 62 PSRELSIKHDVDPDEVVEVGDEIDALVLTKEDKEGRLILSKKRAQYERAWGAIEELKEKD 121 Query 124 EAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNRNNV 183 E V GTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIG+EIEAKIIELDK+RNNV Sbjct 122 EPVTGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGQEIEAKIIELDKHRNNV 181 Query 184 VLSRRAWLEQTQSEVRSEFLNNLQKGTIRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWK 243 VLSRRAWLEQTQSEVRSEFL+ LQKG +RKGVVSSIVNFGAFVDLGGVDGLVHVSELSWK Sbjct 182 VLSRRAWLEQTQSEVRSEFLHQLQKGQVRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWK 241 Query 244 HIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGKVTK 303 HIDHPSEVV VGDEVTVEVLDVD+DRERVSLSLKATQEDPWR FARTHAIGQIVPGKVTK Sbjct 242 HIDHPSEVVTVGDEVTVEVLDVDLDRERVSLSLKATQEDPWRVFARTHAIGQIVPGKVTK 301 Query 304 LVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISLSLK 363 LVPFGAFVRVEEGIEGLVHISELAERHV+VPDQVV VG DAMVKVIDIDLERRRISLSLK Sbjct 302 LVPFGAFVRVEEGIEGLVHISELAERHVDVPDQVVTVGQDAMVKVIDIDLERRRISLSLK 361 Query 364 QANEDYTEEFDPAKYGMADSYDEQGNYIFPEGFDAETNEWLEGFEKQRAEWEARYAEAER 423 QA+EDYTEEFDP+KYGMADSYDEQGNYIFPEGFD ETNEWLEGF++QR WEARYAEAER Sbjct 362 QADEDYTEEFDPSKYGMADSYDEQGNYIFPEGFDPETNEWLEGFDEQRQAWEARYAEAER 421 Query 424 RHKMHTAQMEK----FAAAEAAGRGADDQSSASSAPSEK----TAGGSLASDAQLAALRE 475 RH++H Q+E+ A A A G G ++A SA E + GSLASD QLAALRE Sbjct 422 RHRLHGQQIERNRAAAAEAAAVGEGGYSSATADSASGESEVATSDAGSLASDEQLAALRE 481 Query 476 KLAGSA 481 KLAG+A Sbjct 482 KLAGNA 487 >gi|559914|emb|CAA86365.1| 30S ribosomal protein S1 [Mycobacterium leprae] Length=482 Score = 825 bits (2131), Expect = 0.0, Method: Compositional matrix adjust. Identities = 421/483 (88%), Positives = 431/483 (90%), Gaps = 3/483 (0%) Query 1 MPSPTVTSPQVAVNDIGSSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE 60 M P V SPQ+AVND+GSSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE Sbjct 1 MSIPAVPSPQIAVNDVGSSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE 60 Query 61 GVIPARELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALK 120 GVIPARELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALK Sbjct 61 GVIPARELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALK 120 Query 121 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNR 180 EKDEAVKG VIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNR Sbjct 121 EKDEAVKGIVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNR 180 Query 181 NNVVLSRRAWLEQTQSEVRSEFLNNLQKGTIRKGVVSSIVNFGAFVDLGGVDGLVHVSEL 240 NNVVLSRRAWLEQTQSEVRSEFLN LQKG IRKGVVSSIVNFG GGVDGLVHVSEL Sbjct 181 NNVVLSRRAWLEQTQSEVRSEFLNQLQKGAIRKGVVSSIVNFGCVCRSGGVDGLVHVSEL 240 Query 241 SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK 300 SWKHIDHPSEVVQVG+EVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK Sbjct 241 SWKHIDHPSEVVQVGNEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK 300 Query 301 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISL 360 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISL Sbjct 301 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISL 360 Query 361 SLKQANEDYTEEFDPAK--YGMADSYDEQGNYIFPEGFDAETNEWLEGFEKQRAEWEARY 418 SLK P K YG + EGFD ++NEWLEGF+ QRAEWEARY Sbjct 361 SLKADQRGLHRGVRPGKVRYGPTATTSRATTSSL-EGFDPDSNEWLEGFDTQRAEWEARY 419 Query 419 AEAERRHKMHTAQMEKFAAAEAAGRGADDQSSASSAPSEKTAGGSLASDAQLAALREKLA 478 AEAERR+KMHT QMEKFAA E AG G+ +Q ASS PS K GGSLASDAQLAALREKLA Sbjct 420 AEAERRYKMHTIQMEKFAATEEAGHGSSEQPPASSTPSAKATGGSLASDAQLAALREKLA 479 Query 479 GSA 481 GSA Sbjct 480 GSA 482 >gi|226360123|ref|YP_002777901.1| 30S ribosomal protein S1 [Rhodococcus opacus B4] gi|226238608|dbj|BAH48956.1| 30S ribosomal protein S1 [Rhodococcus opacus B4] Length=494 Score = 823 bits (2126), Expect = 0.0, Method: Compositional matrix adjust. Identities = 438/494 (89%), Positives = 454/494 (92%), Gaps = 13/494 (2%) Query 1 MPSPTVTSPQVAVNDIGSSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE 60 MPS TVTSPQVAVNDIGS+EDFLAAID TIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE Sbjct 1 MPSTTVTSPQVAVNDIGSAEDFLAAIDATIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE 60 Query 61 GVIPARELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALK 120 GVIP+RELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIE LK Sbjct 61 GVIPSRELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEELK 120 Query 121 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNR 180 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPY+GKEIEAKIIELDKNR Sbjct 121 EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYVGKEIEAKIIELDKNR 180 Query 181 NNVVLSRRAWLEQTQSEVRSEFLNNLQKGTIRKGVVSSIVNFGAFVDLGGVDGLVHVSEL 240 NNVVLSRRAWLEQTQSEVRSEFL+ LQKG +RKGVVSSIVNFGAFVDLGGVDGLVHVSEL Sbjct 181 NNVVLSRRAWLEQTQSEVRSEFLHQLQKGQVRKGVVSSIVNFGAFVDLGGVDGLVHVSEL 240 Query 241 SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK 300 SWKHIDHPSEVV+VG EVTVEVLDVD+DRERVSLSLKATQEDPWR FARTHAIGQIVPGK Sbjct 241 SWKHIDHPSEVVEVGTEVTVEVLDVDLDRERVSLSLKATQEDPWRQFARTHAIGQIVPGK 300 Query 301 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISL 360 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVV V DDA+VKVIDIDLERRRISL Sbjct 301 VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVGVNDDALVKVIDIDLERRRISL 360 Query 361 SLKQANEDYTEEFDPAKYGMADSYDEQGNYIFPEGFDAETNEWLEGFEKQRAEWEARYAE 420 SLKQANEDY EFDP+KYGMADSYDEQGNYIFPEGFD ETNEWLEGF+KQR EWE RYAE Sbjct 361 SLKQANEDYNAEFDPSKYGMADSYDEQGNYIFPEGFDPETNEWLEGFDKQREEWENRYAE 420 Query 421 AERRHKMHTAQMEKFAAAEAAGRGADDQSSAS-------------SAPSEKTAGGSLASD 467 AERRHKMHTAQMEK AA EAA +S S+ S ++AGGSLASD Sbjct 421 AERRHKMHTAQMEKTAADEAAEAATAAAGYSSESGAGDADAASSSSSSSSESAGGSLASD 480 Query 468 AQLAALREKLAGSA 481 AQLAALREKL+G+A Sbjct 481 AQLAALREKLSGNA 494 >gi|319950983|ref|ZP_08024854.1| 30S ribosomal protein S1 [Dietzia cinnamea P4] gi|319435365|gb|EFV90614.1| 30S ribosomal protein S1 [Dietzia cinnamea P4] Length=490 Score = 822 bits (2122), Expect = 0.0, Method: Compositional matrix adjust. Identities = 422/487 (87%), Positives = 442/487 (91%), Gaps = 10/487 (2%) Query 3 SPTVTSPQVAVNDIGSSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTEGV 62 + TSPQVAVNDIGS+EDFLAAID TIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTEGV Sbjct 2 TTNTTSPQVAVNDIGSAEDFLAAIDATIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTEGV 61 Query 63 IPARELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALKEK 122 IP+RELSIKHDVDP EVV VGDEVEALVLTKEDK+GRLILSKKRAQYERAWGTIE LKEK Sbjct 62 IPSRELSIKHDVDPGEVVEVGDEVEALVLTKEDKDGRLILSKKRAQYERAWGTIEELKEK 121 Query 123 DEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNRNN 182 DEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDL PY+G+E+EAKIIELDKNRNN Sbjct 122 DEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLLPYVGQELEAKIIELDKNRNN 181 Query 183 VVLSRRAWLEQTQSEVRSEFLNNLQKGTIRKGVVSSIVNFGAFVDLGGVDGLVHVSELSW 242 VVLSRRAWLEQTQS VRSEFL+ LQKG +RKGVVSSIVNFGAFVDLGGVDGLVHVSELSW Sbjct 182 VVLSRRAWLEQTQSAVRSEFLHRLQKGQVRKGVVSSIVNFGAFVDLGGVDGLVHVSELSW 241 Query 243 KHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGKVT 302 KHIDHPSEVV+VG EVTVEVLDVD+DRERVSLSLKATQEDPWRHFARTHAIGQIVPGKVT Sbjct 242 KHIDHPSEVVEVGQEVTVEVLDVDLDRERVSLSLKATQEDPWRHFARTHAIGQIVPGKVT 301 Query 303 KLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISLSL 362 KLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVV+VGDDAMVKVIDIDL+RRRISLSL Sbjct 302 KLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVSVGDDAMVKVIDIDLDRRRISLSL 361 Query 363 KQANEDYTEEFDPAKYGMADSYDEQGNYIFPEGFDAETNEWLEGFEKQRAEWEARYAEAE 422 KQA+EDYTEEFDP+KYGMADSYDE GNYIFPEGFD ETNEWLEGFEKQR EWE RYAEAE Sbjct 362 KQADEDYTEEFDPSKYGMADSYDEAGNYIFPEGFDPETNEWLEGFEKQREEWENRYAEAE 421 Query 423 RRHKMHTAQMEK----------FAAAEAAGRGADDQSSASSAPSEKTAGGSLASDAQLAA 472 RRHKMHTAQ+EK A + A A+ A + +T GGSLASD QLAA Sbjct 422 RRHKMHTAQIEKGRVAAAEAAEAAPTNYSSESAPSSRPAADAGTSETTGGSLASDEQLAA 481 Query 473 LREKLAG 479 LR KLAG Sbjct 482 LRAKLAG 488 >gi|344043437|gb|EGV39130.1| 30S ribosomal protein S1 [Corynebacterium glutamicum S9114] Length=486 Score = 818 bits (2114), Expect = 0.0, Method: Compositional matrix adjust. Identities = 407/485 (84%), Positives = 440/485 (91%), Gaps = 8/485 (1%) Query 4 PTVTSPQVAVNDIGSSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTEGVI 63 PT +PQVA+NDIGS+EDFLAAID TIKYFNDGDIVEGT+VKVDRDEVLLDIGYKTEGVI Sbjct 2 PTNNAPQVAINDIGSAEDFLAAIDATIKYFNDGDIVEGTVVKVDRDEVLLDIGYKTEGVI 61 Query 64 PARELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALKEKD 123 P+RELSIKHDVDP+EVV VGD+++ALVLTKEDKEGRLILSKKRAQYERAWG IE LKEKD Sbjct 62 PSRELSIKHDVDPDEVVEVGDQIDALVLTKEDKEGRLILSKKRAQYERAWGAIEELKEKD 121 Query 124 EAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNRNNV 183 E V GTVIEVVKGGLI+DIGLRGFLPASLVEMRRVRDL PYIG+E+EAKIIELDKNRNNV Sbjct 122 EPVTGTVIEVVKGGLIIDIGLRGFLPASLVEMRRVRDLDPYIGQELEAKIIELDKNRNNV 181 Query 184 VLSRRAWLEQTQSEVRSEFLNNLQKGTIRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWK 243 VLSRRA+LEQTQSEVRSEFL+ LQKG +RKGVVSSIVNFGAFVDLGGVDGLVHVSELSWK Sbjct 182 VLSRRAFLEQTQSEVRSEFLHQLQKGQVRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWK 241 Query 244 HIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGKVTK 303 HIDHPSEVV VGDEVTVEVLDVD+DRERVSLSLKATQEDPWR FARTHA+GQIVPGKVTK Sbjct 242 HIDHPSEVVTVGDEVTVEVLDVDLDRERVSLSLKATQEDPWRVFARTHAVGQIVPGKVTK 301 Query 304 LVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISLSLK 363 LVPFGAFVRVEEGIEGLVHISELA+RHVEVPDQVVAVG++ MVKVIDIDLERRRISLSLK Sbjct 302 LVPFGAFVRVEEGIEGLVHISELAQRHVEVPDQVVAVGEEVMVKVIDIDLERRRISLSLK 361 Query 364 QANEDYTEEFDPAKYGMADSYDEQGNYIFPEGFDAETNEWLEGFEKQRAEWEARYAEAER 423 QA+EDYTEEFDP+KYGMADSYDEQGNYIFPEGFDAETNEWLEGF++QR WEARYAE+ER Sbjct 362 QADEDYTEEFDPSKYGMADSYDEQGNYIFPEGFDAETNEWLEGFDEQRQAWEARYAESER 421 Query 424 RHKMHTAQMEKFAAAE--------AAGRGADDQSSASSAPSEKTAGGSLASDAQLAALRE 475 R++ HTAQME+ A D A +A + + + GSLASD QLAALRE Sbjct 422 RYQAHTAQMERRRQQAEEAAAEAPAGNYSTDSAEDAPAAEAVEESAGSLASDEQLAALRE 481 Query 476 KLAGS 480 KLAG+ Sbjct 482 KLAGN 486 >gi|68263494|emb|CAI36982.1| 30S ribosomal protein S1 [Corynebacterium jeikeium K411] Length=516 Score = 813 bits (2101), Expect = 0.0, Method: Compositional matrix adjust. Identities = 409/485 (85%), Positives = 440/485 (91%), Gaps = 9/485 (1%) Query 4 PTVTSPQVAVNDIGSSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTEGVI 63 PT PQVA+NDIGS+EDFLAA+D TIKYFNDGDIVEGT+VKVD DEVLLDIGYKTEGVI Sbjct 30 PTNNVPQVAINDIGSAEDFLAAVDSTIKYFNDGDIVEGTVVKVDHDEVLLDIGYKTEGVI 89 Query 64 PARELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALKEKD 123 P+RELSIKHDVDP EVV VGDE++ALVLTKEDKEGRLILSKKRAQYERAWGTIE LK+ + Sbjct 90 PSRELSIKHDVDPGEVVEVGDEIDALVLTKEDKEGRLILSKKRAQYERAWGTIEELKKNE 149 Query 124 EAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNRNNV 183 E V GTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIG+EIEAKIIELDK+RNNV Sbjct 150 EPVTGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGQEIEAKIIELDKHRNNV 209 Query 184 VLSRRAWLEQTQSEVRSEFLNNLQKGTIRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWK 243 VLSRRAWLEQTQSEVRSEFL+ LQKG +RKGVVSSIVNFGAFVDLGGVDGLVHVS+LSWK Sbjct 210 VLSRRAWLEQTQSEVRSEFLHQLQKGQVRKGVVSSIVNFGAFVDLGGVDGLVHVSQLSWK 269 Query 244 HIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGKVTK 303 HIDHPSEVV VGDEVTVEVLDVD+DRERVSLSLKATQEDPWR FARTHAIGQIVPGKVTK Sbjct 270 HIDHPSEVVAVGDEVTVEVLDVDLDRERVSLSLKATQEDPWRVFARTHAIGQIVPGKVTK 329 Query 304 LVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISLSLK 363 LVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVV VG DAMVKVIDIDLERRRISLSLK Sbjct 330 LVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVGVGQDAMVKVIDIDLERRRISLSLK 389 Query 364 QANEDYTEEFDPAKYGMADSYDEQGNYIFPEGFDAETNEWLEGFEKQRAEWEARYAEAER 423 QA+EDYTEEFDP+KYGMADSYDEQGNYIFPEGFD ETNEWLEG+++QR WE RYAE+ER Sbjct 390 QADEDYTEEFDPSKYGMADSYDEQGNYIFPEGFDPETNEWLEGYDEQRQAWEERYAESER 449 Query 424 RHKMHTAQMEKFAAAEAAGR-------GADDQSSASSAPSEKTA--GGSLASDAQLAALR 474 RH++HTAQ+E+ AA A ++ Q+ ++ A SE A G+LASD QLAALR Sbjct 450 RHRLHTAQIERNRAAAAEAAANGEGGYSSESQTESAPASSEAPAQDAGTLASDEQLAALR 509 Query 475 EKLAG 479 EKLAG Sbjct 510 EKLAG 514 >gi|19552573|ref|NP_600575.1| 30S ribosomal protein S1 [Corynebacterium glutamicum ATCC 13032] gi|62390242|ref|YP_225644.1| 30S ribosomal protein S1 [Corynebacterium glutamicum ATCC 13032] gi|21324127|dbj|BAB98752.1| Ribosomal protein S1 [Corynebacterium glutamicum ATCC 13032] gi|41325579|emb|CAF21368.1| 30S RIBOSOMAL PROTEIN S1 [Corynebacterium glutamicum ATCC 13032] Length=486 Score = 813 bits (2100), Expect = 0.0, Method: Compositional matrix adjust. Identities = 405/485 (84%), Positives = 438/485 (91%), Gaps = 8/485 (1%) Query 4 PTVTSPQVAVNDIGSSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTEGVI 63 PT +PQVA+NDIGS+EDFLAAID TIKYFNDGDIVEGT+VKVDRDEVLLDIGYKTEGVI Sbjct 2 PTNNAPQVAINDIGSAEDFLAAIDATIKYFNDGDIVEGTVVKVDRDEVLLDIGYKTEGVI 61 Query 64 PARELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALKEKD 123 P+RELSIKHDVDP+EVV VGD+++ALVLTKEDKEGRLILSKKRAQYERAWG IE LKEKD Sbjct 62 PSRELSIKHDVDPDEVVEVGDQIDALVLTKEDKEGRLILSKKRAQYERAWGAIEELKEKD 121 Query 124 EAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNRNNV 183 E V GTVIEVVKGGLI+DIGLRGFLPASLVEMRRVRDL PYIG+E+EAKIIELDKNRNNV Sbjct 122 EPVTGTVIEVVKGGLIIDIGLRGFLPASLVEMRRVRDLDPYIGQELEAKIIELDKNRNNV 181 Query 184 VLSRRAWLEQTQSEVRSEFLNNLQKGTIRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWK 243 VLSRRA+LEQTQSEVRSEFL+ LQKG +RKGVVSSIVNFGAFVDLGGVDGLVHVSELSWK Sbjct 182 VLSRRAFLEQTQSEVRSEFLHQLQKGQVRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWK 241 Query 244 HIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGKVTK 303 HIDHPSEVV VGDEVTVEVL+VD+DRERVSLSLKATQEDPWR FARTHA+GQIVPGKVTK Sbjct 242 HIDHPSEVVTVGDEVTVEVLEVDLDRERVSLSLKATQEDPWRVFARTHAVGQIVPGKVTK 301 Query 304 LVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISLSLK 363 LVPFGAFVRVEEGIEGLVHISELA+RHVEVPDQVVAVG++ MVKVIDIDLERRRISLSLK Sbjct 302 LVPFGAFVRVEEGIEGLVHISELAQRHVEVPDQVVAVGEEVMVKVIDIDLERRRISLSLK 361 Query 364 QANEDYTEEFDPAKYGMADSYDEQGNYIFPEGFDAETNEWLEGFEKQRAEWEARYAEAER 423 QA+EDYTEEFDP+KYGMADSYDEQGNYIFPEGFDAETNEWLEGF++QR WEARYAE+ER Sbjct 362 QADEDYTEEFDPSKYGMADSYDEQGNYIFPEGFDAETNEWLEGFDEQRQAWEARYAESER 421 Query 424 RHKMHTAQMEKFAAAE--------AAGRGADDQSSASSAPSEKTAGGSLASDAQLAALRE 475 R HTAQ+E+ A D A +A + + + GSLASD QLAALRE Sbjct 422 RFTAHTAQIERRRQQAEEAAAEAPAGNYSTDSAEDAPAAEAVEESAGSLASDEQLAALRE 481 Query 476 KLAGS 480 KLAG+ Sbjct 482 KLAGN 486 >gi|145295496|ref|YP_001138317.1| 30S ribosomal protein S1 [Corynebacterium glutamicum R] gi|140845416|dbj|BAF54415.1| hypothetical protein [Corynebacterium glutamicum R] Length=486 Score = 813 bits (2100), Expect = 0.0, Method: Compositional matrix adjust. Identities = 405/485 (84%), Positives = 438/485 (91%), Gaps = 8/485 (1%) Query 4 PTVTSPQVAVNDIGSSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTEGVI 63 PT +PQVA+NDIGS+EDFLAAID TIKYFNDGDIVEG +VKVDRDEVLLDIGYKTEGVI Sbjct 2 PTNNAPQVAINDIGSAEDFLAAIDATIKYFNDGDIVEGIVVKVDRDEVLLDIGYKTEGVI 61 Query 64 PARELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALKEKD 123 P+RELSIKHDVDP+EVV VGD+++ALVLTKEDKEGRLILSKKRAQYERAWG IE LKEKD Sbjct 62 PSRELSIKHDVDPDEVVEVGDQIDALVLTKEDKEGRLILSKKRAQYERAWGAIEELKEKD 121 Query 124 EAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNRNNV 183 E V GTVIEVVKGGLI+DIGLRGFLPASLVEMRRVRDL PYIG+E+EAKIIELDKNRNNV Sbjct 122 EPVTGTVIEVVKGGLIIDIGLRGFLPASLVEMRRVRDLDPYIGQELEAKIIELDKNRNNV 181 Query 184 VLSRRAWLEQTQSEVRSEFLNNLQKGTIRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWK 243 VLSRRA+LEQTQSEVRSEFL+ LQKG +RKGVVSSIVNFGAFVDLGGVDGLVHVSELSWK Sbjct 182 VLSRRAFLEQTQSEVRSEFLHQLQKGQVRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWK 241 Query 244 HIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGKVTK 303 HIDHPSEVV VGDEVTVEVLDVD+DRERVSLSLKATQEDPWR FAR HA+GQIVPGKVTK Sbjct 242 HIDHPSEVVTVGDEVTVEVLDVDLDRERVSLSLKATQEDPWRVFARNHAVGQIVPGKVTK 301 Query 304 LVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISLSLK 363 LVPFGAFVRVEEGIEGLVHISELA+RHVEVPDQVVAVG++ MVKVIDIDLERRRISLSLK Sbjct 302 LVPFGAFVRVEEGIEGLVHISELAQRHVEVPDQVVAVGEEVMVKVIDIDLERRRISLSLK 361 Query 364 QANEDYTEEFDPAKYGMADSYDEQGNYIFPEGFDAETNEWLEGFEKQRAEWEARYAEAER 423 QA+EDYTEEFDP+KYGMADSYDEQGNYIFPEGFDAETNEWLEGF++QR WEARYAE+ER Sbjct 362 QADEDYTEEFDPSKYGMADSYDEQGNYIFPEGFDAETNEWLEGFDEQRQAWEARYAESER 421 Query 424 RHKMHTAQMEKFAAAE--------AAGRGADDQSSASSAPSEKTAGGSLASDAQLAALRE 475 R++ HTAQME+ A D A +A + + + GSLASD QLAALRE Sbjct 422 RYQAHTAQMERRRQQAEEAAAEAPAGNYSTDSVEDAPAAEAVEESAGSLASDEQLAALRE 481 Query 476 KLAGS 480 KLAG+ Sbjct 482 KLAGN 486 >gi|340794195|ref|YP_004759658.1| 30S ribosomal protein S1 [Corynebacterium variabile DSM 44702] gi|340534105|gb|AEK36585.1| 30S ribosomal protein S1 [Corynebacterium variabile DSM 44702] Length=486 Score = 813 bits (2099), Expect = 0.0, Method: Compositional matrix adjust. Identities = 406/485 (84%), Positives = 437/485 (91%), Gaps = 8/485 (1%) Query 4 PTVTSPQVAVNDIGSSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTEGVI 63 PT PQVA+NDIG++EDFLAAID+TIKYFNDGDIVEGT+VKVD DEVLLDIGYKTEGVI Sbjct 2 PTNNVPQVAINDIGTAEDFLAAIDQTIKYFNDGDIVEGTVVKVDHDEVLLDIGYKTEGVI 61 Query 64 PARELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALKEKD 123 P+RELSIKHDVDP EVV +GDEV+ALVLTKEDK+GRLILSKKRAQYERAWGTIE LKEKD Sbjct 62 PSRELSIKHDVDPGEVVEIGDEVDALVLTKEDKDGRLILSKKRAQYERAWGTIEELKEKD 121 Query 124 EAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNRNNV 183 E V GTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIG+E+EAKIIELDK RNNV Sbjct 122 EPVTGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGQELEAKIIELDKQRNNV 181 Query 184 VLSRRAWLEQTQSEVRSEFLNNLQKGTIRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWK 243 VLSRRAWLEQTQSEVRSEFL+ LQKG +RKGVVSSIVNFGAFVDLGGVDGLVHVSELSWK Sbjct 182 VLSRRAWLEQTQSEVRSEFLHQLQKGQVRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWK 241 Query 244 HIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGKVTK 303 HIDHPSEVV VGDEVTVEVLDVD+DRERVSLSLKATQEDPWR FARTHAIGQIVPGKVTK Sbjct 242 HIDHPSEVVAVGDEVTVEVLDVDLDRERVSLSLKATQEDPWRVFARTHAIGQIVPGKVTK 301 Query 304 LVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISLSLK 363 LVPFGAFVRVEEGIEGLVHISELAERH++VPDQ+V VG D MVKVIDIDLERRRISLSLK Sbjct 302 LVPFGAFVRVEEGIEGLVHISELAERHIDVPDQIVTVGQDLMVKVIDIDLERRRISLSLK 361 Query 364 QANEDYTEEFDPAKYGMADSYDEQGNYIFPEGFDAETNEWLEGFEKQRAEWEARYAEAER 423 QA+ED+TEEFDP+KYGMADSYDEQGNYIFPEGFDAETNEW+EGF+ QR WEARYAE+ER Sbjct 362 QADEDFTEEFDPSKYGMADSYDEQGNYIFPEGFDAETNEWMEGFDAQREAWEARYAESER 421 Query 424 RHKMHTAQMEKFAAAEAAGRGADDQSSASSAPSEK--------TAGGSLASDAQLAALRE 475 RHK+H AQ+E+ A A A + +SS+ + GSLASD QLAALRE Sbjct 422 RHKLHAAQIERHRAQAAEAAEAGESGYSSSSDEAAEAPAAEAVSDSGSLASDEQLAALRE 481 Query 476 KLAGS 480 KLAG+ Sbjct 482 KLAGN 486 >gi|25028013|ref|NP_738067.1| 30S ribosomal protein S1 [Corynebacterium efficiens YS-314] gi|259506404|ref|ZP_05749306.1| 30S ribosomal protein S1 [Corynebacterium efficiens YS-314] gi|23493296|dbj|BAC18267.1| putative 30S ribosomal protein S1 [Corynebacterium efficiens YS-314] gi|259166011|gb|EEW50565.1| 30S ribosomal protein S1 [Corynebacterium efficiens YS-314] Length=485 Score = 812 bits (2098), Expect = 0.0, Method: Compositional matrix adjust. Identities = 407/485 (84%), Positives = 440/485 (91%), Gaps = 9/485 (1%) Query 4 PTVTSPQVAVNDIGSSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTEGVI 63 PT +PQVA+NDIGS+EDFLAAID TIKYFNDGDIVEGT+VKVD DEVLLDIGYKTEGVI Sbjct 2 PTNNAPQVAINDIGSAEDFLAAIDATIKYFNDGDIVEGTVVKVDHDEVLLDIGYKTEGVI 61 Query 64 PARELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALKEKD 123 P+RELSIKHDVDP+EVV VGD+++ALVLTKEDKEGRLILSKKRAQYERAWG IE LKEKD Sbjct 62 PSRELSIKHDVDPDEVVQVGDQIDALVLTKEDKEGRLILSKKRAQYERAWGAIEELKEKD 121 Query 124 EAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNRNNV 183 E V GTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDL PYIG+E+EAKIIELDKNRNNV Sbjct 122 EPVTGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLDPYIGQELEAKIIELDKNRNNV 181 Query 184 VLSRRAWLEQTQSEVRSEFLNNLQKGTIRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWK 243 VLSRRA+LEQTQSEVRSEFL+ LQKG +RKGVVSSIVNFGAFVDLGGVDGLVHVSELSWK Sbjct 182 VLSRRAFLEQTQSEVRSEFLHQLQKGQVRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWK 241 Query 244 HIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGKVTK 303 HIDHPSEVV VGDEVTVEVLDVD+DRERVSLSLKATQEDPWR FARTHA+GQIVPGKVTK Sbjct 242 HIDHPSEVVTVGDEVTVEVLDVDLDRERVSLSLKATQEDPWRVFARTHAVGQIVPGKVTK 301 Query 304 LVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISLSLK 363 LVPFGAFVRVEEGIEGLVHISELA+RHVEVPDQVV VG++ MVKVIDIDLERRRISLSLK Sbjct 302 LVPFGAFVRVEEGIEGLVHISELAQRHVEVPDQVVTVGEEVMVKVIDIDLERRRISLSLK 361 Query 364 QANEDYTEEFDPAKYGMADSYDEQGNYIFPEGFDAETNEWLEGFEKQRAEWEARYAEAER 423 QA+EDYTEEFDP+KYGMADSYDEQGNYIFPEGFD ETNEWLEGF++QR WEARYAE+ER Sbjct 362 QADEDYTEEFDPSKYGMADSYDEQGNYIFPEGFDPETNEWLEGFDEQRQAWEARYAESER 421 Query 424 RHKMHTAQMEKFAAAE--------AAGRGADDQSSASSAPSEKTAGGSLASDAQLAALRE 475 R + HTAQ+E+ A ++ + +A SA E+T GGSLASD QLAALRE Sbjct 422 RFQAHTAQIERRRQQAEEAAAEAPAGNYSSESEDAAPSAAVEET-GGSLASDEQLAALRE 480 Query 476 KLAGS 480 KLAG+ Sbjct 481 KLAGN 485 >gi|161986623|ref|YP_250600.2| 30S ribosomal protein S1 [Corynebacterium jeikeium K411] Length=488 Score = 811 bits (2096), Expect = 0.0, Method: Compositional matrix adjust. Identities = 409/485 (85%), Positives = 440/485 (91%), Gaps = 9/485 (1%) Query 4 PTVTSPQVAVNDIGSSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTEGVI 63 PT PQVA+NDIGS+EDFLAA+D TIKYFNDGDIVEGT+VKVD DEVLLDIGYKTEGVI Sbjct 2 PTNNVPQVAINDIGSAEDFLAAVDSTIKYFNDGDIVEGTVVKVDHDEVLLDIGYKTEGVI 61 Query 64 PARELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALKEKD 123 P+RELSIKHDVDP EVV VGDE++ALVLTKEDKEGRLILSKKRAQYERAWGTIE LK+ + Sbjct 62 PSRELSIKHDVDPGEVVEVGDEIDALVLTKEDKEGRLILSKKRAQYERAWGTIEELKKNE 121 Query 124 EAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNRNNV 183 E V GTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIG+EIEAKIIELDK+RNNV Sbjct 122 EPVTGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGQEIEAKIIELDKHRNNV 181 Query 184 VLSRRAWLEQTQSEVRSEFLNNLQKGTIRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWK 243 VLSRRAWLEQTQSEVRSEFL+ LQKG +RKGVVSSIVNFGAFVDLGGVDGLVHVS+LSWK Sbjct 182 VLSRRAWLEQTQSEVRSEFLHQLQKGQVRKGVVSSIVNFGAFVDLGGVDGLVHVSQLSWK 241 Query 244 HIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGKVTK 303 HIDHPSEVV VGDEVTVEVLDVD+DRERVSLSLKATQEDPWR FARTHAIGQIVPGKVTK Sbjct 242 HIDHPSEVVAVGDEVTVEVLDVDLDRERVSLSLKATQEDPWRVFARTHAIGQIVPGKVTK 301 Query 304 LVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISLSLK 363 LVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVV VG DAMVKVIDIDLERRRISLSLK Sbjct 302 LVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVGVGQDAMVKVIDIDLERRRISLSLK 361 Query 364 QANEDYTEEFDPAKYGMADSYDEQGNYIFPEGFDAETNEWLEGFEKQRAEWEARYAEAER 423 QA+EDYTEEFDP+KYGMADSYDEQGNYIFPEGFD ETNEWLEG+++QR WE RYAE+ER Sbjct 362 QADEDYTEEFDPSKYGMADSYDEQGNYIFPEGFDPETNEWLEGYDEQRQAWEERYAESER 421 Query 424 RHKMHTAQMEKFAAAEAAGR-------GADDQSSASSAPSEKTA--GGSLASDAQLAALR 474 RH++HTAQ+E+ AA A ++ Q+ ++ A SE A G+LASD QLAALR Sbjct 422 RHRLHTAQIERNRAAAAEAAANGEGGYSSESQTESAPASSEAPAQDAGTLASDEQLAALR 481 Query 475 EKLAG 479 EKLAG Sbjct 482 EKLAG 486 >gi|260578011|ref|ZP_05845934.1| 30S ribosomal protein S1 [Corynebacterium jeikeium ATCC 43734] gi|258603838|gb|EEW17092.1| 30S ribosomal protein S1 [Corynebacterium jeikeium ATCC 43734] Length=488 Score = 811 bits (2096), Expect = 0.0, Method: Compositional matrix adjust. Identities = 409/485 (85%), Positives = 440/485 (91%), Gaps = 9/485 (1%) Query 4 PTVTSPQVAVNDIGSSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTEGVI 63 PT PQVA+NDIGS+EDFLAA+D TIKYFNDGDIVEGT+VKVD DEVLLDIGYKTEGVI Sbjct 2 PTNNVPQVAINDIGSAEDFLAAVDSTIKYFNDGDIVEGTVVKVDHDEVLLDIGYKTEGVI 61 Query 64 PARELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALKEKD 123 P+RELSIKHDVDP EVV VGDE++ALVLTKEDKEGRLILSKKRAQYERAWGTIE LK+ + Sbjct 62 PSRELSIKHDVDPGEVVEVGDEIDALVLTKEDKEGRLILSKKRAQYERAWGTIEELKKNE 121 Query 124 EAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNRNNV 183 E V GTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIG+EIEAKIIELDK+RNNV Sbjct 122 EPVTGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGQEIEAKIIELDKHRNNV 181 Query 184 VLSRRAWLEQTQSEVRSEFLNNLQKGTIRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWK 243 VLSRRAWLEQTQSEVRSEFL+ LQKG +RKGVVSSIVNFGAFVDLGGVDGLVHVS+LSWK Sbjct 182 VLSRRAWLEQTQSEVRSEFLHQLQKGQVRKGVVSSIVNFGAFVDLGGVDGLVHVSQLSWK 241 Query 244 HIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGKVTK 303 HIDHPSEVV VGDEVTVEVLDVD+DRERVSLSLKATQEDPWR FARTHAIGQIVPGKVTK Sbjct 242 HIDHPSEVVAVGDEVTVEVLDVDLDRERVSLSLKATQEDPWRVFARTHAIGQIVPGKVTK 301 Query 304 LVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISLSLK 363 LVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVV VG DAMVKVIDIDLERRRISLSLK Sbjct 302 LVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVGVGQDAMVKVIDIDLERRRISLSLK 361 Query 364 QANEDYTEEFDPAKYGMADSYDEQGNYIFPEGFDAETNEWLEGFEKQRAEWEARYAEAER 423 QA+EDYTEEFDP+KYGMADSYDEQGNYIFPEGFD ETNEWLEG+++QR WE RYAE+ER Sbjct 362 QADEDYTEEFDPSKYGMADSYDEQGNYIFPEGFDPETNEWLEGYDEQRQAWEERYAESER 421 Query 424 RHKMHTAQMEKFAAAEAAGR-------GADDQSSASSAPSEKTA--GGSLASDAQLAALR 474 RH++HTAQ+E+ AA A ++ Q+ ++ A SE A G+LASD QLAALR Sbjct 422 RHRLHTAQIERNRAAAAEAAANGEGGYSSETQTESAPASSEAPAQDAGTLASDEQLAALR 481 Query 475 EKLAG 479 EKLAG Sbjct 482 EKLAG 486 >gi|336325470|ref|YP_004605436.1| 30S ribosomal protein S1 [Corynebacterium resistens DSM 45100] gi|336101452|gb|AEI09272.1| 30S ribosomal protein S1 [Corynebacterium resistens DSM 45100] Length=488 Score = 811 bits (2094), Expect = 0.0, Method: Compositional matrix adjust. Identities = 413/486 (85%), Positives = 440/486 (91%), Gaps = 8/486 (1%) Query 4 PTVTSPQVAVNDIGSSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTEGVI 63 PT PQVA+NDIGS+EDFLAA+D TIKYFNDGDIVEGT+VKVD DEVLLDIGYKTEGVI Sbjct 2 PTNNVPQVAINDIGSAEDFLAAVDSTIKYFNDGDIVEGTVVKVDHDEVLLDIGYKTEGVI 61 Query 64 PARELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALKEKD 123 P+RELSIKHDVDP EVV VGDE++ALVLTKEDKEGRLILSKKRAQYERAWG IE LKEKD Sbjct 62 PSRELSIKHDVDPGEVVEVGDEIDALVLTKEDKEGRLILSKKRAQYERAWGAIEELKEKD 121 Query 124 EAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNRNNV 183 E V GTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIG+EIEAKIIELDK+RNNV Sbjct 122 EPVTGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGQEIEAKIIELDKHRNNV 181 Query 184 VLSRRAWLEQTQSEVRSEFLNNLQKGTIRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWK 243 VLSRRAWLEQTQSEVRSEFL+ LQKG +RKGVVSSIVNFGAFVDLGGVDGLVHVSELSWK Sbjct 182 VLSRRAWLEQTQSEVRSEFLHQLQKGQVRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWK 241 Query 244 HIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGKVTK 303 HIDHPSEVV VGDEVTVEVLDVD+DRERVSLSLKATQEDPWR FARTHAIGQIVPGKVTK Sbjct 242 HIDHPSEVVAVGDEVTVEVLDVDLDRERVSLSLKATQEDPWRVFARTHAIGQIVPGKVTK 301 Query 304 LVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISLSLK 363 LVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVV VG DAMVKVIDIDLERRRISLSLK Sbjct 302 LVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVGVGQDAMVKVIDIDLERRRISLSLK 361 Query 364 QANEDYTEEFDPAKYGMADSYDEQGNYIFPEGFDAETNEWLEGFEKQRAEWEARYAEAER 423 QA+EDYTEEFDP+KYGMADSYDEQGNYIFPEGFD ETNEWLEGF+ QR EWE+RYAEAER Sbjct 362 QADEDYTEEFDPSKYGMADSYDEQGNYIFPEGFDPETNEWLEGFDAQRQEWESRYAEAER 421 Query 424 RHKMHTAQMEKFAAAEAAGRGADDQSSASSAPSEKTA--------GGSLASDAQLAALRE 475 RH++HTAQ+E+ AA A + +S + + ++A G+LASD QLAALRE Sbjct 422 RHRLHTAQIERNRAAAAEAAANGEGGYSSESEASESAASTEAPADSGTLASDEQLAALRE 481 Query 476 KLAGSA 481 KLAG A Sbjct 482 KLAGGA 487 >gi|213965205|ref|ZP_03393402.1| 30S ribosomal protein S1 [Corynebacterium amycolatum SK46] gi|213952057|gb|EEB63442.1| 30S ribosomal protein S1 [Corynebacterium amycolatum SK46] Length=487 Score = 810 bits (2093), Expect = 0.0, Method: Compositional matrix adjust. Identities = 403/485 (84%), Positives = 435/485 (90%), Gaps = 9/485 (1%) Query 5 TVTSPQVAVNDIGSSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTEGVIP 64 T PQVA+NDIG++EDFLAA+D T+KYFNDGDIVEGT+VKVDRDEVLLDIGYKTEGVIP Sbjct 3 TSNVPQVAINDIGTAEDFLAAVDSTMKYFNDGDIVEGTVVKVDRDEVLLDIGYKTEGVIP 62 Query 65 ARELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALKEKDE 124 +RELSIKHDVDP+EVV VGDE++ALVLTKEDKEGRLILSKKRAQYERAWGTIE LKE DE Sbjct 63 SRELSIKHDVDPDEVVEVGDEIDALVLTKEDKEGRLILSKKRAQYERAWGTIEQLKENDE 122 Query 125 AVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNRNNVV 184 V GTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIG+EIEAKIIELDKNRNNVV Sbjct 123 PVTGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGQEIEAKIIELDKNRNNVV 182 Query 185 LSRRAWLEQTQSEVRSEFLNNLQKGTIRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWKH 244 LSRRAWLEQTQSEVRSEFL+ LQKG +RKGVVSSIVNFGAFVDLGGVDGLVHVSELSWKH Sbjct 183 LSRRAWLEQTQSEVRSEFLHQLQKGQVRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWKH 242 Query 245 IDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGKVTKL 304 IDHPSEVVQVGDEVTVEVL+VD++RERVSLSLKATQEDPWR FARTHAIGQIVPGKVTKL Sbjct 243 IDHPSEVVQVGDEVTVEVLEVDLNRERVSLSLKATQEDPWRVFARTHAIGQIVPGKVTKL 302 Query 305 VPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISLSLKQ 364 VPFGAFVRVEEGIEGLVHISELA RH++VPDQ+V+V + MVKVIDIDLERRRISLSLKQ Sbjct 303 VPFGAFVRVEEGIEGLVHISELASRHIDVPDQIVSVDEQVMVKVIDIDLERRRISLSLKQ 362 Query 365 ANEDYTEEFDPAKYGMADSYDEQGNYIFPEGFDAETNEWLEGFEKQRAEWEARYAEAERR 424 A+ED+TEEFDP KYGM DSYDEQGNYIFPEGFD ETNEW+EGFE QRAEWEARYAEAER Sbjct 363 ADEDFTEEFDPTKYGMGDSYDEQGNYIFPEGFDPETNEWMEGFETQRAEWEARYAEAERH 422 Query 425 HKMHTAQMEKFAAAEAAGRGADDQSSASSAPSEK---------TAGGSLASDAQLAALRE 475 H++H AQ+E+ AA A S+ S + AGG+LASD QLAALRE Sbjct 423 HQLHAAQIERHRAAAAEAAETASNYSSESGEAAPAAPAAPAADNAGGTLASDEQLAALRE 482 Query 476 KLAGS 480 KLAG+ Sbjct 483 KLAGN 487 >gi|172040820|ref|YP_001800534.1| 30S ribosomal protein S1 [Corynebacterium urealyticum DSM 7109] gi|171852124|emb|CAQ05100.1| 30S ribosomal protein S1 [Corynebacterium urealyticum DSM 7109] Length=486 Score = 810 bits (2091), Expect = 0.0, Method: Compositional matrix adjust. Identities = 408/485 (85%), Positives = 441/485 (91%), Gaps = 11/485 (2%) Query 4 PTVTSPQVAVNDIGSSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTEGVI 63 PT PQVA+NDIGS+EDFLAA+D+TIKYFNDGDIVEGTIVKVD DEVLLDIGYKTEGVI Sbjct 2 PTNNVPQVAINDIGSAEDFLAAVDETIKYFNDGDIVEGTIVKVDHDEVLLDIGYKTEGVI 61 Query 64 PARELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALKEKD 123 P+RELSIKHDVDPNEVV VGDE++ALVLTKEDKEGRLILSKKRAQYERAWG IE LKE D Sbjct 62 PSRELSIKHDVDPNEVVEVGDEIDALVLTKEDKEGRLILSKKRAQYERAWGAIEQLKEND 121 Query 124 EAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNRNNV 183 E V GTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIG+EIEAKIIELDK+RNNV Sbjct 122 EPVTGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGQEIEAKIIELDKHRNNV 181 Query 184 VLSRRAWLEQTQSEVRSEFLNNLQKGTIRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWK 243 VLSRRA+LE+TQS VRSEFL+ LQKG +RKGVVSSIVNFGAFVDLGGVDGLVHVSELSWK Sbjct 182 VLSRRAYLEETQSAVRSEFLHQLQKGQVRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWK 241 Query 244 HIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGKVTK 303 HIDHPSEVV VGDEVTVEVLDVD+DRERVSLSLKATQEDPWR FARTHAIGQIVPGKVTK Sbjct 242 HIDHPSEVVTVGDEVTVEVLDVDLDRERVSLSLKATQEDPWRVFARTHAIGQIVPGKVTK 301 Query 304 LVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISLSLK 363 LVPFGAFVRVEEGIEGLVHISELAERHVEVPDQ+V VG++ MVKVIDIDLERRRISLSLK Sbjct 302 LVPFGAFVRVEEGIEGLVHISELAERHVEVPDQIVNVGEEVMVKVIDIDLERRRISLSLK 361 Query 364 QANEDYTEEFDPAKYGMADSYDEQGNYIFPEGFDAETNEWLEGFEKQRAEWEARYAEAER 423 QA+ED+TEEFDP+KYGMADSYDEQGNYIFPEGFD ETNEWLEGF++QR WEARYAE+ER Sbjct 362 QADEDFTEEFDPSKYGMADSYDEQGNYIFPEGFDPETNEWLEGFDEQREAWEARYAESER 421 Query 424 RHKMHTAQMEKF----AAAEAAGRG-----ADDQSSASSAPSEKTAGGSLASDAQLAALR 474 RH++H AQ+E+ A A A G G + ++ A+ AP+E G+LASD QLAALR Sbjct 422 RHRLHAAQIERHRAAAAEAAANGEGGYSSESGAETKAAEAPAED--AGTLASDEQLAALR 479 Query 475 EKLAG 479 EKLAG Sbjct 480 EKLAG 484 >gi|225022623|ref|ZP_03711815.1| hypothetical protein CORMATOL_02665 [Corynebacterium matruchotii ATCC 33806] gi|305682064|ref|ZP_07404868.1| 30S ribosomal protein S1 [Corynebacterium matruchotii ATCC 14266] gi|224944531|gb|EEG25740.1| hypothetical protein CORMATOL_02665 [Corynebacterium matruchotii ATCC 33806] gi|305658537|gb|EFM48040.1| 30S ribosomal protein S1 [Corynebacterium matruchotii ATCC 14266] Length=493 Score = 808 bits (2087), Expect = 0.0, Method: Compositional matrix adjust. Identities = 407/486 (84%), Positives = 437/486 (90%), Gaps = 8/486 (1%) Query 4 PTVTSPQVAVNDIGSSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTEGVI 63 PT +PQVA+NDIGS E+FLAAID TIKYFNDGDIVEGT+VKVD DEVLLDIGYKTEGVI Sbjct 2 PTNKAPQVAINDIGSPEEFLAAIDATIKYFNDGDIVEGTVVKVDHDEVLLDIGYKTEGVI 61 Query 64 PARELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALKEKD 123 P RELSIKHDVDP+EVV VGD+++ALVLTKEDKEGRLILSKKRAQYERAWG IE LKEKD Sbjct 62 PVRELSIKHDVDPDEVVEVGDQIDALVLTKEDKEGRLILSKKRAQYERAWGAIEELKEKD 121 Query 124 EAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNRNNV 183 EAV GTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDL PYIG++IEAKIIELDK RNNV Sbjct 122 EAVTGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLDPYIGQQIEAKIIELDKQRNNV 181 Query 184 VLSRRAWLEQTQSEVRSEFLNNLQKGTIRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWK 243 VLSRRAWLEQTQSEVRSEFL+ LQKG +RKGVVSSIVNFGAFVDLGGVDGLVHVSELSWK Sbjct 182 VLSRRAWLEQTQSEVRSEFLHQLQKGQVRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWK 241 Query 244 HIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGKVTK 303 HIDHPSEVV VGDEVTVEVLDVD+DRERVSLSLKATQEDPWR FARTHA+GQIVPGKVTK Sbjct 242 HIDHPSEVVSVGDEVTVEVLDVDLDRERVSLSLKATQEDPWRVFARTHAVGQIVPGKVTK 301 Query 304 LVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISLSLK 363 LVPFGAFVRVEEGIEGLVHISELA+RHVEVPDQVV +DAMVKVIDIDLERRRISLSLK Sbjct 302 LVPFGAFVRVEEGIEGLVHISELAQRHVEVPDQVVNANEDAMVKVIDIDLERRRISLSLK 361 Query 364 QANEDYTEEFDPAKYGMADSYDEQGNYIFPEGFDAETNEWLEGFEKQRAEWEARYAEAER 423 QA+EDYTEEFDP+KYGMADSYDEQGNYIFPEGFD ETNEWLEGF++QR WEARYAE+ER Sbjct 362 QADEDYTEEFDPSKYGMADSYDEQGNYIFPEGFDPETNEWLEGFDEQRQAWEARYAESER 421 Query 424 RHKMHTAQMEK--------FAAAEAAGRGADDQSSASSAPSEKTAGGSLASDAQLAALRE 475 R ++HTAQ+E+ AA E+A G +A A +E T+G SLAS+ QL ALRE Sbjct 422 RFQLHTAQIERNRIAAAEAAAAGESATGGNYSSETAGEAAAEVTSGNSLASEEQLKALRE 481 Query 476 KLAGSA 481 KL G A Sbjct 482 KLTGKA 487 >gi|337290612|ref|YP_004629633.1| 30S ribosomal protein S1 [Corynebacterium ulcerans BR-AD22] gi|334696726|gb|AEG81523.1| 30S ribosomal protein S1 [Corynebacterium ulcerans 809] gi|334698918|gb|AEG83714.1| 30S ribosomal protein S1 [Corynebacterium ulcerans BR-AD22] Length=487 Score = 806 bits (2082), Expect = 0.0, Method: Compositional matrix adjust. Identities = 406/486 (84%), Positives = 439/486 (91%), Gaps = 9/486 (1%) Query 4 PTVTSPQVAVNDIGSSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTEGVI 63 PT PQVA+NDIGS+EDFLAA+D TIKYFNDGDIVEGT+VKVD DEVLLDIGYKTEGVI Sbjct 2 PTNNVPQVAINDIGSAEDFLAAVDATIKYFNDGDIVEGTVVKVDHDEVLLDIGYKTEGVI 61 Query 64 PARELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALKEKD 123 P+RELSIKHDVDP+EVV VGD+++ALVLTKEDKEGRLILSKKRAQYERAWG IE LKEKD Sbjct 62 PSRELSIKHDVDPDEVVEVGDQIDALVLTKEDKEGRLILSKKRAQYERAWGAIEELKEKD 121 Query 124 EAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNRNNV 183 E V GTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDL PYIG++IEAKIIELDK RNNV Sbjct 122 EPVTGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLDPYIGQQIEAKIIELDKQRNNV 181 Query 184 VLSRRAWLEQTQSEVRSEFLNNLQKGTIRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWK 243 VLSRRAWLEQTQSEVRSEFL+ LQKG +RKGVVSSIVNFGAFVDLGGVDGLVHVSELSWK Sbjct 182 VLSRRAWLEQTQSEVRSEFLHQLQKGQVRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWK 241 Query 244 HIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGKVTK 303 HIDHPSEVV VGDEVTVEVLDVD+DRERVSLSLKATQEDPWR FARTHA+GQIVPGKVTK Sbjct 242 HIDHPSEVVAVGDEVTVEVLDVDLDRERVSLSLKATQEDPWRVFARTHAVGQIVPGKVTK 301 Query 304 LVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISLSLK 363 LVPFGAFVRVEEGIEGLVHISELA+RHVEVPDQVV VGD+AMVKVIDIDLERRRISLSLK Sbjct 302 LVPFGAFVRVEEGIEGLVHISELAQRHVEVPDQVVNVGDEAMVKVIDIDLERRRISLSLK 361 Query 364 QANEDYTEEFDPAKYGMADSYDEQGNYIFPEGFDAETNEWLEGFEKQRAEWEARYAEAER 423 QA+EDYTEEFDP+KYGMADSYDEQGNYIFPEGFD ETNEW+EGF++QR WEARYAE+ER Sbjct 362 QADEDYTEEFDPSKYGMADSYDEQGNYIFPEGFDPETNEWMEGFDEQRQAWEARYAESER 421 Query 424 RHKMHTAQMEK---------FAAAEAAGRGADDQSSASSAPSEKTAGGSLASDAQLAALR 474 R ++HT Q+EK AA E A ++ +A + + + GGSLASD QLAALR Sbjct 422 RFQLHTVQIEKNRVAAAAEAAAAGEEANYSSETAEAAPAEAASEVEGGSLASDEQLAALR 481 Query 475 EKLAGS 480 EKLAG+ Sbjct 482 EKLAGN 487 Lambda K H 0.314 0.133 0.371 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1020034159852 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40