BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1633
Length=698
Score E
Sequences producing significant alignments: (Bits) Value
gi|15841088|ref|NP_336125.1| excinuclease ABC subunit B [Mycobac... 1410 0.0
gi|289750178|ref|ZP_06509556.1| excinuclease ABC subunit B uvrB ... 1410 0.0
gi|289554593|ref|ZP_06443803.1| excinuclease ABC subunit B uvrB ... 1410 0.0
gi|31792819|ref|NP_855312.1| excinuclease ABC subunit B [Mycobac... 1410 0.0
gi|167968414|ref|ZP_02550691.1| excinuclease ABC subunit B [Myco... 1409 0.0
gi|121637540|ref|YP_977763.1| excinuclease ABC subunit B [Mycoba... 1408 0.0
gi|148822840|ref|YP_001287594.1| excinuclease ABC subunit B [Myc... 1408 0.0
gi|339631689|ref|YP_004723331.1| excinuclease ABC subunit B [Myc... 1407 0.0
gi|240168014|ref|ZP_04746673.1| excinuclease ABC subunit B [Myco... 1367 0.0
gi|254820352|ref|ZP_05225353.1| excinuclease ABC subunit B [Myco... 1361 0.0
gi|296164512|ref|ZP_06847083.1| excision endonuclease subunit Uv... 1355 0.0
gi|342860789|ref|ZP_08717439.1| excinuclease ABC subunit B [Myco... 1353 0.0
gi|118463533|ref|YP_882325.1| excinuclease ABC subunit B [Mycoba... 1347 0.0
gi|41407433|ref|NP_960269.1| excinuclease ABC subunit B [Mycobac... 1346 0.0
gi|15827723|ref|NP_301986.1| excinuclease ABC subunit B [Mycobac... 1322 0.0
gi|333990449|ref|YP_004523063.1| excinuclease ABC (subunit B-hel... 1313 0.0
gi|183982451|ref|YP_001850742.1| excinuclease ABC (subunit B-hel... 1309 0.0
gi|108799967|ref|YP_640164.1| excinuclease ABC subunit B [Mycoba... 1308 0.0
gi|118617256|ref|YP_905588.1| excinuclease ABC subunit B [Mycoba... 1295 0.0
gi|118472594|ref|YP_888108.1| excinuclease ABC subunit B [Mycoba... 1295 0.0
gi|145224140|ref|YP_001134818.1| excinuclease ABC subunit B [Myc... 1292 0.0
gi|315444476|ref|YP_004077355.1| excinuclease ABC subunit B [Myc... 1288 0.0
gi|126435595|ref|YP_001071286.1| excinuclease ABC subunit B [Myc... 1288 0.0
gi|120404324|ref|YP_954153.1| excinuclease ABC subunit B [Mycoba... 1280 0.0
gi|169629394|ref|YP_001703043.1| excinuclease ABC subunit B [Myc... 1260 0.0
gi|111017990|ref|YP_700962.1| excinuclease ABC subunit B [Rhodoc... 1249 0.0
gi|226360119|ref|YP_002777897.1| excinuclease ABC subunit B [Rho... 1249 0.0
gi|54023870|ref|YP_118112.1| excinuclease ABC subunit B [Nocardi... 1234 0.0
gi|326382689|ref|ZP_08204380.1| excinuclease ABC subunit B [Gord... 1232 0.0
gi|262202763|ref|YP_003273971.1| excinuclease ABC subunit B [Gor... 1231 0.0
gi|325674226|ref|ZP_08153915.1| excision endonuclease subunit Uv... 1226 0.0
gi|312139895|ref|YP_004007231.1| excinuclease ABC subunit b uvrb... 1225 0.0
gi|229492754|ref|ZP_04386555.1| excinuclease ABC subunit B [Rhod... 1221 0.0
gi|226306795|ref|YP_002766755.1| UvrABC system protein B [Rhodoc... 1221 0.0
gi|296140129|ref|YP_003647372.1| excinuclease ABC subunit B [Tsu... 1212 0.0
gi|333919161|ref|YP_004492742.1| UvrABC system protein B [Amycol... 1202 0.0
gi|331697648|ref|YP_004333887.1| UvrABC system protein B [Pseudo... 1201 0.0
gi|325002615|ref|ZP_08123727.1| excinuclease ABC subunit B [Pseu... 1196 0.0
gi|302528101|ref|ZP_07280443.1| excinuclease ABC, B subunit [Str... 1184 0.0
gi|340529541|gb|AEK44746.1| excinuclease ABC subunit B [Amycolat... 1179 0.0
gi|300787966|ref|YP_003768257.1| excinuclease ABC subunit B [Amy... 1179 0.0
gi|257056574|ref|YP_003134406.1| excinuclease ABC subunit B [Sac... 1174 0.0
gi|256379520|ref|YP_003103180.1| excinuclease ABC subunit B [Act... 1165 0.0
gi|291009196|ref|ZP_06567169.1| excinuclease ABC subunit B [Sacc... 1162 0.0
gi|289753720|ref|ZP_06513098.1| excinuclease ABC (subunit B-heli... 1162 0.0
gi|134101920|ref|YP_001107581.1| excinuclease ABC subunit B [Sac... 1162 0.0
gi|258653200|ref|YP_003202356.1| excinuclease ABC subunit B [Nak... 1157 0.0
gi|296393098|ref|YP_003657982.1| excinuclease ABC subunit B [Seg... 1115 0.0
gi|319949850|ref|ZP_08023863.1| excinuclease ABC subunit B [Diet... 1097 0.0
gi|317506145|ref|ZP_07963968.1| excinuclease ABC [Segniliparus r... 1096 0.0
>gi|15841088|ref|NP_336125.1| excinuclease ABC subunit B [Mycobacterium tuberculosis CDC1551]
gi|253799329|ref|YP_003032330.1| excinuclease ABC subunit B uvrB [Mycobacterium tuberculosis KZN
1435]
gi|13881302|gb|AAK45939.1| excinuclease ABC, subunit B [Mycobacterium tuberculosis CDC1551]
gi|253320832|gb|ACT25435.1| excinuclease ABC subunit B uvrB [Mycobacterium tuberculosis KZN
1435]
Length=739
Score = 1410 bits (3651), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 698/698 (100%), Positives = 698/698 (100%), Gaps = 0/698 (0%)
Query 1 VRAGGHFEVVSPHAPAGDQPAAIDELERRINAGERDVVLLGATGTGKSATTAWLIERLQR 60
VRAGGHFEVVSPHAPAGDQPAAIDELERRINAGERDVVLLGATGTGKSATTAWLIERLQR
Sbjct 42 VRAGGHFEVVSPHAPAGDQPAAIDELERRINAGERDVVLLGATGTGKSATTAWLIERLQR 101
Query 61 PTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD 120
PTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD
Sbjct 102 PTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD 161
Query 121 VERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVELKVGEEVPRDGLLRLLVD 180
VERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVELKVGEEVPRDGLLRLLVD
Sbjct 162 VERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVELKVGEEVPRDGLLRLLVD 221
Query 181 VQYTRNDMSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGEVIRQVD 240
VQYTRNDMSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGEVIRQVD
Sbjct 222 VQYTRNDMSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGEVIRQVD 281
Query 241 SLRIFPATHYVAGPERMAHAVSAIEEELAERLAELESQGKLLEAQRLRMRTNYDIEMMRQ 300
SLRIFPATHYVAGPERMAHAVSAIEEELAERLAELESQGKLLEAQRLRMRTNYDIEMMRQ
Sbjct 282 SLRIFPATHYVAGPERMAHAVSAIEEELAERLAELESQGKLLEAQRLRMRTNYDIEMMRQ 341
Query 301 VGFCSGIENYSRHIDGRGPGTPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKR 360
VGFCSGIENYSRHIDGRGPGTPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKR
Sbjct 342 VGFCSGIENYSRHIDGRGPGTPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKR 401
Query 361 NLVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQTGGEFVEQVIRPTGLV 420
NLVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQTGGEFVEQVIRPTGLV
Sbjct 402 NLVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQTGGEFVEQVIRPTGLV 461
Query 421 DPKVVVKPTKGQIDDLIGEIRTRADADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSE 480
DPKVVVKPTKGQIDDLIGEIRTRADADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSE
Sbjct 462 DPKVVVKPTKGQIDDLIGEIRTRADADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSE 521
Query 481 VDTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTI 540
VDTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTI
Sbjct 522 VDTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTI 581
Query 541 GRAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNEANGIDPQPLRKKIADILDQ 600
GRAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNEANGIDPQPLRKKIADILDQ
Sbjct 582 GRAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNEANGIDPQPLRKKIADILDQ 641
Query 601 VYREADDTAVVEVGGSGRNASRGRRAQGEPGRAVSAGVFEGRDTSAMPRAELADLIKDLT 660
VYREADDTAVVEVGGSGRNASRGRRAQGEPGRAVSAGVFEGRDTSAMPRAELADLIKDLT
Sbjct 642 VYREADDTAVVEVGGSGRNASRGRRAQGEPGRAVSAGVFEGRDTSAMPRAELADLIKDLT 701
Query 661 AQMMAAARDLQFELAARFRDEIADLKRELRGMDAAGLK 698
AQMMAAARDLQFELAARFRDEIADLKRELRGMDAAGLK
Sbjct 702 AQMMAAARDLQFELAARFRDEIADLKRELRGMDAAGLK 739
>gi|289750178|ref|ZP_06509556.1| excinuclease ABC subunit B uvrB [Mycobacterium tuberculosis T92]
gi|289690765|gb|EFD58194.1| excinuclease ABC subunit B uvrB [Mycobacterium tuberculosis T92]
Length=758
Score = 1410 bits (3650), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 698/698 (100%), Positives = 698/698 (100%), Gaps = 0/698 (0%)
Query 1 VRAGGHFEVVSPHAPAGDQPAAIDELERRINAGERDVVLLGATGTGKSATTAWLIERLQR 60
VRAGGHFEVVSPHAPAGDQPAAIDELERRINAGERDVVLLGATGTGKSATTAWLIERLQR
Sbjct 61 VRAGGHFEVVSPHAPAGDQPAAIDELERRINAGERDVVLLGATGTGKSATTAWLIERLQR 120
Query 61 PTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD 120
PTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD
Sbjct 121 PTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD 180
Query 121 VERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVELKVGEEVPRDGLLRLLVD 180
VERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVELKVGEEVPRDGLLRLLVD
Sbjct 181 VERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVELKVGEEVPRDGLLRLLVD 240
Query 181 VQYTRNDMSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGEVIRQVD 240
VQYTRNDMSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGEVIRQVD
Sbjct 241 VQYTRNDMSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGEVIRQVD 300
Query 241 SLRIFPATHYVAGPERMAHAVSAIEEELAERLAELESQGKLLEAQRLRMRTNYDIEMMRQ 300
SLRIFPATHYVAGPERMAHAVSAIEEELAERLAELESQGKLLEAQRLRMRTNYDIEMMRQ
Sbjct 301 SLRIFPATHYVAGPERMAHAVSAIEEELAERLAELESQGKLLEAQRLRMRTNYDIEMMRQ 360
Query 301 VGFCSGIENYSRHIDGRGPGTPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKR 360
VGFCSGIENYSRHIDGRGPGTPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKR
Sbjct 361 VGFCSGIENYSRHIDGRGPGTPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKR 420
Query 361 NLVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQTGGEFVEQVIRPTGLV 420
NLVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQTGGEFVEQVIRPTGLV
Sbjct 421 NLVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQTGGEFVEQVIRPTGLV 480
Query 421 DPKVVVKPTKGQIDDLIGEIRTRADADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSE 480
DPKVVVKPTKGQIDDLIGEIRTRADADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSE
Sbjct 481 DPKVVVKPTKGQIDDLIGEIRTRADADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSE 540
Query 481 VDTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTI 540
VDTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTI
Sbjct 541 VDTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTI 600
Query 541 GRAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNEANGIDPQPLRKKIADILDQ 600
GRAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNEANGIDPQPLRKKIADILDQ
Sbjct 601 GRAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNEANGIDPQPLRKKIADILDQ 660
Query 601 VYREADDTAVVEVGGSGRNASRGRRAQGEPGRAVSAGVFEGRDTSAMPRAELADLIKDLT 660
VYREADDTAVVEVGGSGRNASRGRRAQGEPGRAVSAGVFEGRDTSAMPRAELADLIKDLT
Sbjct 661 VYREADDTAVVEVGGSGRNASRGRRAQGEPGRAVSAGVFEGRDTSAMPRAELADLIKDLT 720
Query 661 AQMMAAARDLQFELAARFRDEIADLKRELRGMDAAGLK 698
AQMMAAARDLQFELAARFRDEIADLKRELRGMDAAGLK
Sbjct 721 AQMMAAARDLQFELAARFRDEIADLKRELRGMDAAGLK 758
>gi|289554593|ref|ZP_06443803.1| excinuclease ABC subunit B uvrB [Mycobacterium tuberculosis KZN
605]
gi|289439225|gb|EFD21718.1| excinuclease ABC subunit B uvrB [Mycobacterium tuberculosis KZN
605]
Length=711
Score = 1410 bits (3649), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 698/698 (100%), Positives = 698/698 (100%), Gaps = 0/698 (0%)
Query 1 VRAGGHFEVVSPHAPAGDQPAAIDELERRINAGERDVVLLGATGTGKSATTAWLIERLQR 60
VRAGGHFEVVSPHAPAGDQPAAIDELERRINAGERDVVLLGATGTGKSATTAWLIERLQR
Sbjct 14 VRAGGHFEVVSPHAPAGDQPAAIDELERRINAGERDVVLLGATGTGKSATTAWLIERLQR 73
Query 61 PTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD 120
PTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD
Sbjct 74 PTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD 133
Query 121 VERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVELKVGEEVPRDGLLRLLVD 180
VERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVELKVGEEVPRDGLLRLLVD
Sbjct 134 VERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVELKVGEEVPRDGLLRLLVD 193
Query 181 VQYTRNDMSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGEVIRQVD 240
VQYTRNDMSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGEVIRQVD
Sbjct 194 VQYTRNDMSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGEVIRQVD 253
Query 241 SLRIFPATHYVAGPERMAHAVSAIEEELAERLAELESQGKLLEAQRLRMRTNYDIEMMRQ 300
SLRIFPATHYVAGPERMAHAVSAIEEELAERLAELESQGKLLEAQRLRMRTNYDIEMMRQ
Sbjct 254 SLRIFPATHYVAGPERMAHAVSAIEEELAERLAELESQGKLLEAQRLRMRTNYDIEMMRQ 313
Query 301 VGFCSGIENYSRHIDGRGPGTPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKR 360
VGFCSGIENYSRHIDGRGPGTPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKR
Sbjct 314 VGFCSGIENYSRHIDGRGPGTPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKR 373
Query 361 NLVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQTGGEFVEQVIRPTGLV 420
NLVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQTGGEFVEQVIRPTGLV
Sbjct 374 NLVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQTGGEFVEQVIRPTGLV 433
Query 421 DPKVVVKPTKGQIDDLIGEIRTRADADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSE 480
DPKVVVKPTKGQIDDLIGEIRTRADADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSE
Sbjct 434 DPKVVVKPTKGQIDDLIGEIRTRADADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSE 493
Query 481 VDTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTI 540
VDTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTI
Sbjct 494 VDTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTI 553
Query 541 GRAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNEANGIDPQPLRKKIADILDQ 600
GRAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNEANGIDPQPLRKKIADILDQ
Sbjct 554 GRAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNEANGIDPQPLRKKIADILDQ 613
Query 601 VYREADDTAVVEVGGSGRNASRGRRAQGEPGRAVSAGVFEGRDTSAMPRAELADLIKDLT 660
VYREADDTAVVEVGGSGRNASRGRRAQGEPGRAVSAGVFEGRDTSAMPRAELADLIKDLT
Sbjct 614 VYREADDTAVVEVGGSGRNASRGRRAQGEPGRAVSAGVFEGRDTSAMPRAELADLIKDLT 673
Query 661 AQMMAAARDLQFELAARFRDEIADLKRELRGMDAAGLK 698
AQMMAAARDLQFELAARFRDEIADLKRELRGMDAAGLK
Sbjct 674 AQMMAAARDLQFELAARFRDEIADLKRELRGMDAAGLK 711
>gi|31792819|ref|NP_855312.1| excinuclease ABC subunit B [Mycobacterium bovis AF2122/97]
gi|148661428|ref|YP_001282951.1| excinuclease ABC subunit B [Mycobacterium tuberculosis H37Ra]
gi|289443086|ref|ZP_06432830.1| excinuclease ABC, B subunit [Mycobacterium tuberculosis T46]
10 more sequence titles
Length=698
Score = 1410 bits (3649), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 697/698 (99%), Positives = 698/698 (100%), Gaps = 0/698 (0%)
Query 1 VRAGGHFEVVSPHAPAGDQPAAIDELERRINAGERDVVLLGATGTGKSATTAWLIERLQR 60
+RAGGHFEVVSPHAPAGDQPAAIDELERRINAGERDVVLLGATGTGKSATTAWLIERLQR
Sbjct 1 MRAGGHFEVVSPHAPAGDQPAAIDELERRINAGERDVVLLGATGTGKSATTAWLIERLQR 60
Query 61 PTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD 120
PTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD
Sbjct 61 PTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD 120
Query 121 VERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVELKVGEEVPRDGLLRLLVD 180
VERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVELKVGEEVPRDGLLRLLVD
Sbjct 121 VERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVELKVGEEVPRDGLLRLLVD 180
Query 181 VQYTRNDMSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGEVIRQVD 240
VQYTRNDMSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGEVIRQVD
Sbjct 181 VQYTRNDMSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGEVIRQVD 240
Query 241 SLRIFPATHYVAGPERMAHAVSAIEEELAERLAELESQGKLLEAQRLRMRTNYDIEMMRQ 300
SLRIFPATHYVAGPERMAHAVSAIEEELAERLAELESQGKLLEAQRLRMRTNYDIEMMRQ
Sbjct 241 SLRIFPATHYVAGPERMAHAVSAIEEELAERLAELESQGKLLEAQRLRMRTNYDIEMMRQ 300
Query 301 VGFCSGIENYSRHIDGRGPGTPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKR 360
VGFCSGIENYSRHIDGRGPGTPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKR
Sbjct 301 VGFCSGIENYSRHIDGRGPGTPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKR 360
Query 361 NLVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQTGGEFVEQVIRPTGLV 420
NLVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQTGGEFVEQVIRPTGLV
Sbjct 361 NLVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQTGGEFVEQVIRPTGLV 420
Query 421 DPKVVVKPTKGQIDDLIGEIRTRADADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSE 480
DPKVVVKPTKGQIDDLIGEIRTRADADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSE
Sbjct 421 DPKVVVKPTKGQIDDLIGEIRTRADADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSE 480
Query 481 VDTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTI 540
VDTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTI
Sbjct 481 VDTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTI 540
Query 541 GRAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNEANGIDPQPLRKKIADILDQ 600
GRAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNEANGIDPQPLRKKIADILDQ
Sbjct 541 GRAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNEANGIDPQPLRKKIADILDQ 600
Query 601 VYREADDTAVVEVGGSGRNASRGRRAQGEPGRAVSAGVFEGRDTSAMPRAELADLIKDLT 660
VYREADDTAVVEVGGSGRNASRGRRAQGEPGRAVSAGVFEGRDTSAMPRAELADLIKDLT
Sbjct 601 VYREADDTAVVEVGGSGRNASRGRRAQGEPGRAVSAGVFEGRDTSAMPRAELADLIKDLT 660
Query 661 AQMMAAARDLQFELAARFRDEIADLKRELRGMDAAGLK 698
AQMMAAARDLQFELAARFRDEIADLKRELRGMDAAGLK
Sbjct 661 AQMMAAARDLQFELAARFRDEIADLKRELRGMDAAGLK 698
>gi|167968414|ref|ZP_02550691.1| excinuclease ABC subunit B [Mycobacterium tuberculosis H37Ra]
gi|294996582|ref|ZP_06802273.1| excinuclease ABC subunit B [Mycobacterium tuberculosis 210]
gi|297634186|ref|ZP_06951966.1| excinuclease ABC subunit B [Mycobacterium tuberculosis KZN 4207]
30 more sequence titles
Length=719
Score = 1409 bits (3648), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 698/698 (100%), Positives = 698/698 (100%), Gaps = 0/698 (0%)
Query 1 VRAGGHFEVVSPHAPAGDQPAAIDELERRINAGERDVVLLGATGTGKSATTAWLIERLQR 60
VRAGGHFEVVSPHAPAGDQPAAIDELERRINAGERDVVLLGATGTGKSATTAWLIERLQR
Sbjct 22 VRAGGHFEVVSPHAPAGDQPAAIDELERRINAGERDVVLLGATGTGKSATTAWLIERLQR 81
Query 61 PTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD 120
PTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD
Sbjct 82 PTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD 141
Query 121 VERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVELKVGEEVPRDGLLRLLVD 180
VERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVELKVGEEVPRDGLLRLLVD
Sbjct 142 VERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVELKVGEEVPRDGLLRLLVD 201
Query 181 VQYTRNDMSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGEVIRQVD 240
VQYTRNDMSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGEVIRQVD
Sbjct 202 VQYTRNDMSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGEVIRQVD 261
Query 241 SLRIFPATHYVAGPERMAHAVSAIEEELAERLAELESQGKLLEAQRLRMRTNYDIEMMRQ 300
SLRIFPATHYVAGPERMAHAVSAIEEELAERLAELESQGKLLEAQRLRMRTNYDIEMMRQ
Sbjct 262 SLRIFPATHYVAGPERMAHAVSAIEEELAERLAELESQGKLLEAQRLRMRTNYDIEMMRQ 321
Query 301 VGFCSGIENYSRHIDGRGPGTPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKR 360
VGFCSGIENYSRHIDGRGPGTPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKR
Sbjct 322 VGFCSGIENYSRHIDGRGPGTPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKR 381
Query 361 NLVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQTGGEFVEQVIRPTGLV 420
NLVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQTGGEFVEQVIRPTGLV
Sbjct 382 NLVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQTGGEFVEQVIRPTGLV 441
Query 421 DPKVVVKPTKGQIDDLIGEIRTRADADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSE 480
DPKVVVKPTKGQIDDLIGEIRTRADADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSE
Sbjct 442 DPKVVVKPTKGQIDDLIGEIRTRADADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSE 501
Query 481 VDTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTI 540
VDTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTI
Sbjct 502 VDTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTI 561
Query 541 GRAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNEANGIDPQPLRKKIADILDQ 600
GRAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNEANGIDPQPLRKKIADILDQ
Sbjct 562 GRAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNEANGIDPQPLRKKIADILDQ 621
Query 601 VYREADDTAVVEVGGSGRNASRGRRAQGEPGRAVSAGVFEGRDTSAMPRAELADLIKDLT 660
VYREADDTAVVEVGGSGRNASRGRRAQGEPGRAVSAGVFEGRDTSAMPRAELADLIKDLT
Sbjct 622 VYREADDTAVVEVGGSGRNASRGRRAQGEPGRAVSAGVFEGRDTSAMPRAELADLIKDLT 681
Query 661 AQMMAAARDLQFELAARFRDEIADLKRELRGMDAAGLK 698
AQMMAAARDLQFELAARFRDEIADLKRELRGMDAAGLK
Sbjct 682 AQMMAAARDLQFELAARFRDEIADLKRELRGMDAAGLK 719
>gi|121637540|ref|YP_977763.1| excinuclease ABC subunit B [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224990015|ref|YP_002644702.1| excinuclease ABC subunit B [Mycobacterium bovis BCG str. Tokyo
172]
gi|121493187|emb|CAL71658.1| Excinuclease ABC subunit B uvrB [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224773128|dbj|BAH25934.1| excinuclease ABC subunit B [Mycobacterium bovis BCG str. Tokyo
172]
gi|341601558|emb|CCC64231.1| Excinuclease ABC subunit B uvrB [Mycobacterium bovis BCG str.
Moreau RDJ]
Length=698
Score = 1408 bits (3645), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 696/698 (99%), Positives = 698/698 (100%), Gaps = 0/698 (0%)
Query 1 VRAGGHFEVVSPHAPAGDQPAAIDELERRINAGERDVVLLGATGTGKSATTAWLIERLQR 60
+RAGGHFEVVSPHAPAGDQPAAIDELERRINAGERDVVLLGATGTGKSATTAWLIERLQR
Sbjct 1 MRAGGHFEVVSPHAPAGDQPAAIDELERRINAGERDVVLLGATGTGKSATTAWLIERLQR 60
Query 61 PTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD 120
PTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD
Sbjct 61 PTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD 120
Query 121 VERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVELKVGEEVPRDGLLRLLVD 180
VERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVELKVGEEVPRDGLLRLLVD
Sbjct 121 VERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVELKVGEEVPRDGLLRLLVD 180
Query 181 VQYTRNDMSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGEVIRQVD 240
VQYTRNDMSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGEVIRQVD
Sbjct 181 VQYTRNDMSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGEVIRQVD 240
Query 241 SLRIFPATHYVAGPERMAHAVSAIEEELAERLAELESQGKLLEAQRLRMRTNYDIEMMRQ 300
SLRIFPATHYVAGPERMAHAVSAIEEELAERLAELESQGKLLEAQRLRMRTNYDIEMMRQ
Sbjct 241 SLRIFPATHYVAGPERMAHAVSAIEEELAERLAELESQGKLLEAQRLRMRTNYDIEMMRQ 300
Query 301 VGFCSGIENYSRHIDGRGPGTPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKR 360
VGFCSGIENYSRHIDGRGPGTPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKR
Sbjct 301 VGFCSGIENYSRHIDGRGPGTPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKR 360
Query 361 NLVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQTGGEFVEQVIRPTGLV 420
NLVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQ+GGEFVEQVIRPTGLV
Sbjct 361 NLVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQSGGEFVEQVIRPTGLV 420
Query 421 DPKVVVKPTKGQIDDLIGEIRTRADADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSE 480
DPKVVVKPTKGQIDDLIGEIRTRADADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSE
Sbjct 421 DPKVVVKPTKGQIDDLIGEIRTRADADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSE 480
Query 481 VDTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTI 540
VDTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTI
Sbjct 481 VDTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTI 540
Query 541 GRAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNEANGIDPQPLRKKIADILDQ 600
GRAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNEANGIDPQPLRKKIADILDQ
Sbjct 541 GRAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNEANGIDPQPLRKKIADILDQ 600
Query 601 VYREADDTAVVEVGGSGRNASRGRRAQGEPGRAVSAGVFEGRDTSAMPRAELADLIKDLT 660
VYREADDTAVVEVGGSGRNASRGRRAQGEPGRAVSAGVFEGRDTSAMPRAELADLIKDLT
Sbjct 601 VYREADDTAVVEVGGSGRNASRGRRAQGEPGRAVSAGVFEGRDTSAMPRAELADLIKDLT 660
Query 661 AQMMAAARDLQFELAARFRDEIADLKRELRGMDAAGLK 698
AQMMAAARDLQFELAARFRDEIADLKRELRGMDAAGLK
Sbjct 661 AQMMAAARDLQFELAARFRDEIADLKRELRGMDAAGLK 698
>gi|148822840|ref|YP_001287594.1| excinuclease ABC subunit B [Mycobacterium tuberculosis F11]
gi|148721367|gb|ABR05992.1| excinuclease ABC subunit B (helicase) uvrB [Mycobacterium tuberculosis
F11]
Length=698
Score = 1408 bits (3644), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 696/698 (99%), Positives = 697/698 (99%), Gaps = 0/698 (0%)
Query 1 VRAGGHFEVVSPHAPAGDQPAAIDELERRINAGERDVVLLGATGTGKSATTAWLIERLQR 60
+RAGGHFEVVSPHAPAGDQPAAIDELERRINAGERDVVLLGATGTGKSATTAWLIERLQR
Sbjct 1 MRAGGHFEVVSPHAPAGDQPAAIDELERRINAGERDVVLLGATGTGKSATTAWLIERLQR 60
Query 61 PTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD 120
PTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD
Sbjct 61 PTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD 120
Query 121 VERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVELKVGEEVPRDGLLRLLVD 180
VERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVELKVGEEVPRDGLLRLLVD
Sbjct 121 VERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVELKVGEEVPRDGLLRLLVD 180
Query 181 VQYTRNDMSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGEVIRQVD 240
VQYTRNDMSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGEVIRQVD
Sbjct 181 VQYTRNDMSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGEVIRQVD 240
Query 241 SLRIFPATHYVAGPERMAHAVSAIEEELAERLAELESQGKLLEAQRLRMRTNYDIEMMRQ 300
SLRIFPATHYVAGPERMAHAVSAIEEELAERLAELESQGKLLEAQRLRMRTNYDIEMMRQ
Sbjct 241 SLRIFPATHYVAGPERMAHAVSAIEEELAERLAELESQGKLLEAQRLRMRTNYDIEMMRQ 300
Query 301 VGFCSGIENYSRHIDGRGPGTPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKR 360
VGFCSGIENYSRHIDGRGPGTPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRK
Sbjct 301 VGFCSGIENYSRHIDGRGPGTPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKH 360
Query 361 NLVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQTGGEFVEQVIRPTGLV 420
NLVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQTGGEFVEQVIRPTGLV
Sbjct 361 NLVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQTGGEFVEQVIRPTGLV 420
Query 421 DPKVVVKPTKGQIDDLIGEIRTRADADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSE 480
DPKVVVKPTKGQIDDLIGEIRTRADADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSE
Sbjct 421 DPKVVVKPTKGQIDDLIGEIRTRADADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSE 480
Query 481 VDTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTI 540
VDTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTI
Sbjct 481 VDTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTI 540
Query 541 GRAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNEANGIDPQPLRKKIADILDQ 600
GRAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNEANGIDPQPLRKKIADILDQ
Sbjct 541 GRAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNEANGIDPQPLRKKIADILDQ 600
Query 601 VYREADDTAVVEVGGSGRNASRGRRAQGEPGRAVSAGVFEGRDTSAMPRAELADLIKDLT 660
VYREADDTAVVEVGGSGRNASRGRRAQGEPGRAVSAGVFEGRDTSAMPRAELADLIKDLT
Sbjct 601 VYREADDTAVVEVGGSGRNASRGRRAQGEPGRAVSAGVFEGRDTSAMPRAELADLIKDLT 660
Query 661 AQMMAAARDLQFELAARFRDEIADLKRELRGMDAAGLK 698
AQMMAAARDLQFELAARFRDEIADLKRELRGMDAAGLK
Sbjct 661 AQMMAAARDLQFELAARFRDEIADLKRELRGMDAAGLK 698
>gi|339631689|ref|YP_004723331.1| excinuclease ABC subunit B [Mycobacterium africanum GM041182]
gi|339331045|emb|CCC26717.1| putative excinuclease ABC (subunit B-helicase) UVRB [Mycobacterium
africanum GM041182]
Length=698
Score = 1407 bits (3642), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 695/698 (99%), Positives = 697/698 (99%), Gaps = 0/698 (0%)
Query 1 VRAGGHFEVVSPHAPAGDQPAAIDELERRINAGERDVVLLGATGTGKSATTAWLIERLQR 60
+RAGGHFEVVSPHAPAGDQPAAIDELERRIN+GERDVVLLGATGTGKSATTAWLIERLQR
Sbjct 1 MRAGGHFEVVSPHAPAGDQPAAIDELERRINSGERDVVLLGATGTGKSATTAWLIERLQR 60
Query 61 PTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD 120
PTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD
Sbjct 61 PTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD 120
Query 121 VERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVELKVGEEVPRDGLLRLLVD 180
VERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVELKVGEEVPRDGLLRLLVD
Sbjct 121 VERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVELKVGEEVPRDGLLRLLVD 180
Query 181 VQYTRNDMSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGEVIRQVD 240
VQYTRNDMSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGEVIRQVD
Sbjct 181 VQYTRNDMSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGEVIRQVD 240
Query 241 SLRIFPATHYVAGPERMAHAVSAIEEELAERLAELESQGKLLEAQRLRMRTNYDIEMMRQ 300
SLRIFPATHYVAGPERMAHAVSAIEEELAERLAELESQGKLLEAQRLRMRTNYDIEMMRQ
Sbjct 241 SLRIFPATHYVAGPERMAHAVSAIEEELAERLAELESQGKLLEAQRLRMRTNYDIEMMRQ 300
Query 301 VGFCSGIENYSRHIDGRGPGTPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKR 360
VGFCSGIENYSRHIDGRGPGTPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKR
Sbjct 301 VGFCSGIENYSRHIDGRGPGTPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKR 360
Query 361 NLVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQTGGEFVEQVIRPTGLV 420
NLVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQTGGEFVEQVIRPTGLV
Sbjct 361 NLVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQTGGEFVEQVIRPTGLV 420
Query 421 DPKVVVKPTKGQIDDLIGEIRTRADADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSE 480
DPKVVVKPTKGQIDDLIGEIRTRADADQRVLVTTLTKKM EDLTDYLLEMGIRVRYLHSE
Sbjct 421 DPKVVVKPTKGQIDDLIGEIRTRADADQRVLVTTLTKKMVEDLTDYLLEMGIRVRYLHSE 480
Query 481 VDTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTI 540
VDTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTI
Sbjct 481 VDTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTI 540
Query 541 GRAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNEANGIDPQPLRKKIADILDQ 600
GRAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNEANGIDPQPLRKKIADILDQ
Sbjct 541 GRAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNEANGIDPQPLRKKIADILDQ 600
Query 601 VYREADDTAVVEVGGSGRNASRGRRAQGEPGRAVSAGVFEGRDTSAMPRAELADLIKDLT 660
VYREADDTAVVEVGGSGRNASRGRRAQGEPGRAVSAGVFEGRDTSAMPRAELADLIKDLT
Sbjct 601 VYREADDTAVVEVGGSGRNASRGRRAQGEPGRAVSAGVFEGRDTSAMPRAELADLIKDLT 660
Query 661 AQMMAAARDLQFELAARFRDEIADLKRELRGMDAAGLK 698
AQMMAAARDLQFELAARFRDEIADLKRELRGMDAAGLK
Sbjct 661 AQMMAAARDLQFELAARFRDEIADLKRELRGMDAAGLK 698
>gi|240168014|ref|ZP_04746673.1| excinuclease ABC subunit B [Mycobacterium kansasii ATCC 12478]
Length=698
Score = 1367 bits (3538), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 670/698 (96%), Positives = 685/698 (99%), Gaps = 0/698 (0%)
Query 1 VRAGGHFEVVSPHAPAGDQPAAIDELERRINAGERDVVLLGATGTGKSATTAWLIERLQR 60
+R+G FEVVSPHAPAGDQPAAIDELERRINAGERDVVLLGATGTGKSATTAWLIERLQR
Sbjct 1 MRSGARFEVVSPHAPAGDQPAAIDELERRINAGERDVVLLGATGTGKSATTAWLIERLQR 60
Query 61 PTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD 120
PTLVM PNKTLAAQ+ANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD
Sbjct 61 PTLVMEPNKTLAAQMANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD 120
Query 121 VERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVELKVGEEVPRDGLLRLLVD 180
VERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVEL+VG EVPRDGLLRLLVD
Sbjct 121 VERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVELRVGSEVPRDGLLRLLVD 180
Query 181 VQYTRNDMSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGEVIRQVD 240
VQYTRND+SFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGEVIRQVD
Sbjct 181 VQYTRNDLSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGEVIRQVD 240
Query 241 SLRIFPATHYVAGPERMAHAVSAIEEELAERLAELESQGKLLEAQRLRMRTNYDIEMMRQ 300
SLRIFPATHYVAGPERMAHA+S IE ELAERLAELE+QGKLLEAQRLRMRTNYD+EMMRQ
Sbjct 241 SLRIFPATHYVAGPERMAHAISTIEGELAERLAELEAQGKLLEAQRLRMRTNYDVEMMRQ 300
Query 301 VGFCSGIENYSRHIDGRGPGTPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKR 360
VGFCSGIENYSRHIDGRGPG+PPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKR
Sbjct 301 VGFCSGIENYSRHIDGRGPGSPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKR 360
Query 361 NLVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQTGGEFVEQVIRPTGLV 420
NLVEYGFRLPSACDNRPLTWEEFA RIGQTVYLSATPGPYELSQ+GGEFVEQVIRPTGLV
Sbjct 361 NLVEYGFRLPSACDNRPLTWEEFATRIGQTVYLSATPGPYELSQSGGEFVEQVIRPTGLV 420
Query 421 DPKVVVKPTKGQIDDLIGEIRTRADADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSE 480
DPKVVVKPTKGQIDDLIGEIR RADADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSE
Sbjct 421 DPKVVVKPTKGQIDDLIGEIRKRADADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSE 480
Query 481 VDTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTI 540
VDTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLV+ILDADKEGFLRSSRSLIQTI
Sbjct 481 VDTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVSILDADKEGFLRSSRSLIQTI 540
Query 541 GRAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNEANGIDPQPLRKKIADILDQ 600
GRAARNVSGEVHMYADKITDSM+EAIDETERRRAKQIAYN+ANGIDPQPLRKKIADILDQ
Sbjct 541 GRAARNVSGEVHMYADKITDSMKEAIDETERRRAKQIAYNQANGIDPQPLRKKIADILDQ 600
Query 601 VYREADDTAVVEVGGSGRNASRGRRAQGEPGRAVSAGVFEGRDTSAMPRAELADLIKDLT 660
VYREADDT VE+GGSGRNASRGRRAQG PGRAVSAGVFEGRDTS MPRAELADLIKDLT
Sbjct 601 VYREADDTEAVEIGGSGRNASRGRRAQGAPGRAVSAGVFEGRDTSNMPRAELADLIKDLT 660
Query 661 AQMMAAARDLQFELAARFRDEIADLKRELRGMDAAGLK 698
QMMAAARDLQFELAARFRDEIADLK+ELRGMDAAGLK
Sbjct 661 EQMMAAARDLQFELAARFRDEIADLKKELRGMDAAGLK 698
>gi|254820352|ref|ZP_05225353.1| excinuclease ABC subunit B [Mycobacterium intracellulare ATCC
13950]
Length=725
Score = 1361 bits (3523), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 669/700 (96%), Positives = 686/700 (98%), Gaps = 2/700 (0%)
Query 1 VRAGGHFEVVSPHAPAGDQPAAIDELERRINAGERDVVLLGATGTGKSATTAWLIERLQR 60
VRAGG FEVVSPH PAGDQPAAIDELERRI AGERDVVLLGATGTGKSATTAWLIERLQR
Sbjct 26 VRAGGRFEVVSPHDPAGDQPAAIDELERRIRAGERDVVLLGATGTGKSATTAWLIERLQR 85
Query 61 PTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD 120
PTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD
Sbjct 86 PTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD 145
Query 121 VERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVELKVGEEVPRDGLLRLLVD 180
VERLRHSATS+LLSRRDVVVVASVSCIYGLGTPQSYLDRSVEL+VG EVPRDGLLRLLVD
Sbjct 146 VERLRHSATSSLLSRRDVVVVASVSCIYGLGTPQSYLDRSVELRVGNEVPRDGLLRLLVD 205
Query 181 VQYTRNDMSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGEVIRQVD 240
VQYTRND+SFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTG+VIRQVD
Sbjct 206 VQYTRNDLSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGDVIRQVD 265
Query 241 SLRIFPATHYVAGPERMAHAVSAIEEELAERLAELESQGKLLEAQRLRMRTNYDIEMMRQ 300
SLRIFPATHYVAGPERMAHA+S IEEELA RLAELE QGKLLEAQRLRMRTNYDIEMMRQ
Sbjct 266 SLRIFPATHYVAGPERMAHAISTIEEELAARLAELEGQGKLLEAQRLRMRTNYDIEMMRQ 325
Query 301 VGFCSGIENYSRHIDGRGPGTPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKR 360
VGFCSGIENYSRHID RGPG+PPATLLDYFPEDFL+VIDESHVTVPQIGGMYEGD+SRKR
Sbjct 326 VGFCSGIENYSRHIDARGPGSPPATLLDYFPEDFLMVIDESHVTVPQIGGMYEGDMSRKR 385
Query 361 NLVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQTGGEFVEQVIRPTGLV 420
NLVEYGFRLPSACDNRPLTWEEFADR+GQTVYLSATPGPYELSQ+GGEFVEQVIRPTGLV
Sbjct 386 NLVEYGFRLPSACDNRPLTWEEFADRVGQTVYLSATPGPYELSQSGGEFVEQVIRPTGLV 445
Query 421 DPKVVVKPTKGQIDDLIGEIRTRADADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSE 480
DPKVVVKPTKGQIDDLIGEIR R DADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSE
Sbjct 446 DPKVVVKPTKGQIDDLIGEIRKRTDADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSE 505
Query 481 VDTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTI 540
VDTLRRVELLRQLRLG+YDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTI
Sbjct 506 VDTLRRVELLRQLRLGEYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTI 565
Query 541 GRAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNEANGIDPQPLRKKIADILDQ 600
GRAARNVSGEVHMYAD ITDSM+EAIDETERRRAKQIAYNEANGIDPQPLRKKIADILDQ
Sbjct 566 GRAARNVSGEVHMYADTITDSMKEAIDETERRRAKQIAYNEANGIDPQPLRKKIADILDQ 625
Query 601 VYREADDT--AVVEVGGSGRNASRGRRAQGEPGRAVSAGVFEGRDTSAMPRAELADLIKD 658
VYREA DT +VVE+GGSGRNASRGRRAQGEPGRAVSAGVFEGRDT++MPRAELADLIKD
Sbjct 626 VYREASDTEASVVEIGGSGRNASRGRRAQGEPGRAVSAGVFEGRDTTSMPRAELADLIKD 685
Query 659 LTAQMMAAARDLQFELAARFRDEIADLKRELRGMDAAGLK 698
LTAQMMAAARDLQFELAARFRDEIADLK+ELRGMDAAGLK
Sbjct 686 LTAQMMAAARDLQFELAARFRDEIADLKKELRGMDAAGLK 725
>gi|296164512|ref|ZP_06847083.1| excision endonuclease subunit UvrB [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295900112|gb|EFG79547.1| excision endonuclease subunit UvrB [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=743
Score = 1355 bits (3507), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 668/698 (96%), Positives = 681/698 (98%), Gaps = 0/698 (0%)
Query 1 VRAGGHFEVVSPHAPAGDQPAAIDELERRINAGERDVVLLGATGTGKSATTAWLIERLQR 60
VR GG FEVVSPHAPAGDQPAAIDELERRI AGERDVVLLGATGTGKSATTAWLIERLQR
Sbjct 46 VRVGGRFEVVSPHAPAGDQPAAIDELERRIRAGERDVVLLGATGTGKSATTAWLIERLQR 105
Query 61 PTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD 120
PTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD
Sbjct 106 PTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD 165
Query 121 VERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVELKVGEEVPRDGLLRLLVD 180
VERLRHSATS+LLSRRDVVVVASVSCIYGLGTPQSYLDRSVEL VG EVPRD LLRLLVD
Sbjct 166 VERLRHSATSSLLSRRDVVVVASVSCIYGLGTPQSYLDRSVELSVGTEVPRDALLRLLVD 225
Query 181 VQYTRNDMSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGEVIRQVD 240
VQYTRND+SFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDE+EALYYLHPLTG+VIRQVD
Sbjct 226 VQYTRNDLSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEVEALYYLHPLTGDVIRQVD 285
Query 241 SLRIFPATHYVAGPERMAHAVSAIEEELAERLAELESQGKLLEAQRLRMRTNYDIEMMRQ 300
SLRIFPATHYVAGPERMAHA+S IEEELA RLAELE QGKLLEAQRLRMRTNYDIEMMRQ
Sbjct 286 SLRIFPATHYVAGPERMAHAISTIEEELAARLAELEGQGKLLEAQRLRMRTNYDIEMMRQ 345
Query 301 VGFCSGIENYSRHIDGRGPGTPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKR 360
VGFCSGIENYSRHIDGRGPG+PPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGD+SRKR
Sbjct 346 VGFCSGIENYSRHIDGRGPGSPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDMSRKR 405
Query 361 NLVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQTGGEFVEQVIRPTGLV 420
NLVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQ GGEFVEQVIRPTGLV
Sbjct 406 NLVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQAGGEFVEQVIRPTGLV 465
Query 421 DPKVVVKPTKGQIDDLIGEIRTRADADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSE 480
DPKVVVKPTKGQIDDLIGEIR R DAD+RVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSE
Sbjct 466 DPKVVVKPTKGQIDDLIGEIRKRTDADERVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSE 525
Query 481 VDTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTI 540
VDTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTI
Sbjct 526 VDTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTI 585
Query 541 GRAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNEANGIDPQPLRKKIADILDQ 600
GRAARNVSGEVHMYAD ITDSM+EAIDETERRRAKQIAYNEA+GIDPQPLRKKIADILDQ
Sbjct 586 GRAARNVSGEVHMYADSITDSMKEAIDETERRRAKQIAYNEAHGIDPQPLRKKIADILDQ 645
Query 601 VYREADDTAVVEVGGSGRNASRGRRAQGEPGRAVSAGVFEGRDTSAMPRAELADLIKDLT 660
VYREADDT V VGGSGRNASRGRRAQGEPGRAVSAGVFEGRDT++MPRAELADLIKDLT
Sbjct 646 VYREADDTETVGVGGSGRNASRGRRAQGEPGRAVSAGVFEGRDTASMPRAELADLIKDLT 705
Query 661 AQMMAAARDLQFELAARFRDEIADLKRELRGMDAAGLK 698
QMMAAARDLQFELAARFRDEIADLK+ELRGMDAAGLK
Sbjct 706 EQMMAAARDLQFELAARFRDEIADLKKELRGMDAAGLK 743
>gi|342860789|ref|ZP_08717439.1| excinuclease ABC subunit B [Mycobacterium colombiense CECT 3035]
gi|342131813|gb|EGT85070.1| excinuclease ABC subunit B [Mycobacterium colombiense CECT 3035]
Length=719
Score = 1353 bits (3503), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 664/698 (96%), Positives = 681/698 (98%), Gaps = 0/698 (0%)
Query 1 VRAGGHFEVVSPHAPAGDQPAAIDELERRINAGERDVVLLGATGTGKSATTAWLIERLQR 60
VR GG FEVVSPH PAGDQPAAI ELERRI AGERDVVLLGATGTGKSATTAWLIERLQR
Sbjct 22 VRVGGDFEVVSPHDPAGDQPAAIQELERRIRAGERDVVLLGATGTGKSATTAWLIERLQR 81
Query 61 PTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD 120
PTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD
Sbjct 82 PTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD 141
Query 121 VERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVELKVGEEVPRDGLLRLLVD 180
VERLRHSATS+LLSRRDVVVVASVSCIYGLGTPQSYLDRSVE++VG EVPRD LLRLLVD
Sbjct 142 VERLRHSATSSLLSRRDVVVVASVSCIYGLGTPQSYLDRSVEVRVGAEVPRDALLRLLVD 201
Query 181 VQYTRNDMSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGEVIRQVD 240
VQYTRND+SFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDE+EALYYLHPLTG+VIRQVD
Sbjct 202 VQYTRNDLSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEVEALYYLHPLTGDVIRQVD 261
Query 241 SLRIFPATHYVAGPERMAHAVSAIEEELAERLAELESQGKLLEAQRLRMRTNYDIEMMRQ 300
SLRIFPATHYVAGPERMAHA+S IE ELAERLAELE QGKLLEAQRLRMRTNYDIEMMRQ
Sbjct 262 SLRIFPATHYVAGPERMAHAISTIEAELAERLAELEGQGKLLEAQRLRMRTNYDIEMMRQ 321
Query 301 VGFCSGIENYSRHIDGRGPGTPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKR 360
VGFCSGIENYSRHIDGRGPG+PPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGD+SRKR
Sbjct 322 VGFCSGIENYSRHIDGRGPGSPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDMSRKR 381
Query 361 NLVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQTGGEFVEQVIRPTGLV 420
NLVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQTGGEFVEQVIRPTGLV
Sbjct 382 NLVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQTGGEFVEQVIRPTGLV 441
Query 421 DPKVVVKPTKGQIDDLIGEIRTRADADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSE 480
DPKVVVKPTKGQIDDLIGEIR R +ADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSE
Sbjct 442 DPKVVVKPTKGQIDDLIGEIRKRTEADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSE 501
Query 481 VDTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTI 540
VDTLRRVELLRQLRLG+YDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTI
Sbjct 502 VDTLRRVELLRQLRLGEYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTI 561
Query 541 GRAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNEANGIDPQPLRKKIADILDQ 600
GRAARNVSGEVHMYAD ITDSM+EAIDETERRRAKQ+AYNE +GIDPQPLRKKIADILDQ
Sbjct 562 GRAARNVSGEVHMYADTITDSMKEAIDETERRRAKQVAYNEEHGIDPQPLRKKIADILDQ 621
Query 601 VYREADDTAVVEVGGSGRNASRGRRAQGEPGRAVSAGVFEGRDTSAMPRAELADLIKDLT 660
VYREADD+ VE+GGSGRNASRGRRAQGEPGRAVSAGVFEGRDTS MPRAELADLIKDLT
Sbjct 622 VYREADDSEAVEIGGSGRNASRGRRAQGEPGRAVSAGVFEGRDTSGMPRAELADLIKDLT 681
Query 661 AQMMAAARDLQFELAARFRDEIADLKRELRGMDAAGLK 698
AQMMAAARDLQFELAARFRDEIADLK+ELRGMDAAGLK
Sbjct 682 AQMMAAARDLQFELAARFRDEIADLKKELRGMDAAGLK 719
>gi|118463533|ref|YP_882325.1| excinuclease ABC subunit B [Mycobacterium avium 104]
gi|118164820|gb|ABK65717.1| excinuclease ABC, B subunit [Mycobacterium avium 104]
Length=722
Score = 1347 bits (3487), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 663/698 (95%), Positives = 683/698 (98%), Gaps = 1/698 (0%)
Query 1 VRAGGHFEVVSPHAPAGDQPAAIDELERRINAGERDVVLLGATGTGKSATTAWLIERLQR 60
VRAGG FEVVSPHAPAGDQPAAIDELERRI AGERDVVLLGATGTGKSATTAWLIERLQR
Sbjct 26 VRAGGRFEVVSPHAPAGDQPAAIDELERRIRAGERDVVLLGATGTGKSATTAWLIERLQR 85
Query 61 PTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD 120
PTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD
Sbjct 86 PTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD 145
Query 121 VERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVELKVGEEVPRDGLLRLLVD 180
VERLRHSATS+LLSRRDVVVVASVSCIYGLGTPQSYLDRSVEL+VG EVPRD LLRLLVD
Sbjct 146 VERLRHSATSSLLSRRDVVVVASVSCIYGLGTPQSYLDRSVELRVGTEVPRDALLRLLVD 205
Query 181 VQYTRNDMSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGEVIRQVD 240
VQYTRND+SFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTG+VIRQVD
Sbjct 206 VQYTRNDLSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGDVIRQVD 265
Query 241 SLRIFPATHYVAGPERMAHAVSAIEEELAERLAELESQGKLLEAQRLRMRTNYDIEMMRQ 300
SLRIFPATHYVAGPERMAHA+S IE+ELAERLAELE QGKLLEAQRLRMRTNYDIEMMRQ
Sbjct 266 SLRIFPATHYVAGPERMAHAISTIEQELAERLAELEGQGKLLEAQRLRMRTNYDIEMMRQ 325
Query 301 VGFCSGIENYSRHIDGRGPGTPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKR 360
VGFCSGIENYSRHIDGRGPG+PPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGD+SRKR
Sbjct 326 VGFCSGIENYSRHIDGRGPGSPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDMSRKR 385
Query 361 NLVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQTGGEFVEQVIRPTGLV 420
NLVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQTGGEFVEQVIRPTGLV
Sbjct 386 NLVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQTGGEFVEQVIRPTGLV 445
Query 421 DPKVVVKPTKGQIDDLIGEIRTRADADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSE 480
DPKVVVKPTKGQIDDLIGEIR R +AD+RVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSE
Sbjct 446 DPKVVVKPTKGQIDDLIGEIRKRTEADERVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSE 505
Query 481 VDTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTI 540
VDTLRRVELLRQLRLG+YDVLVGINLLREGLDLPEVSLVAILDADKEGFLRS+RSLIQTI
Sbjct 506 VDTLRRVELLRQLRLGEYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSARSLIQTI 565
Query 541 GRAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNEANGIDPQPLRKKIADILDQ 600
GRAARNVSGEVHMYAD IT+SM+EAIDETERRRAKQIAYNEA+GIDPQPLRKKIADILDQ
Sbjct 566 GRAARNVSGEVHMYADTITESMKEAIDETERRRAKQIAYNEAHGIDPQPLRKKIADILDQ 625
Query 601 VYREADDTAVVEVGGSGRNASRGRRAQGEPGRAVSAGVFEGRDTSAMPRAELADLIKDLT 660
VYREADDT VE+ GSGR+ SRGRRAQGEPGRAVSAG+ EGRDT+ MPRAELADLIKDLT
Sbjct 626 VYREADDTETVEI-GSGRSMSRGRRAQGEPGRAVSAGIVEGRDTTNMPRAELADLIKDLT 684
Query 661 AQMMAAARDLQFELAARFRDEIADLKRELRGMDAAGLK 698
AQMMAAARDLQFELAARFRDEIADLK+ELRGMDAAGLK
Sbjct 685 AQMMAAARDLQFELAARFRDEIADLKKELRGMDAAGLK 722
>gi|41407433|ref|NP_960269.1| excinuclease ABC subunit B [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|254775593|ref|ZP_05217109.1| excinuclease ABC subunit B [Mycobacterium avium subsp. avium
ATCC 25291]
gi|41395785|gb|AAS03652.1| UvrB [Mycobacterium avium subsp. paratuberculosis K-10]
gi|336457786|gb|EGO36780.1| excinuclease ABC, B subunit [Mycobacterium avium subsp. paratuberculosis
S397]
Length=722
Score = 1346 bits (3484), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 663/698 (95%), Positives = 683/698 (98%), Gaps = 1/698 (0%)
Query 1 VRAGGHFEVVSPHAPAGDQPAAIDELERRINAGERDVVLLGATGTGKSATTAWLIERLQR 60
VRAGG FEVVSPHAPAGDQPAAIDELERRI AGERDVVLLGATGTGKSATTAWLIERLQR
Sbjct 26 VRAGGRFEVVSPHAPAGDQPAAIDELERRIRAGERDVVLLGATGTGKSATTAWLIERLQR 85
Query 61 PTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD 120
PTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD
Sbjct 86 PTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD 145
Query 121 VERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVELKVGEEVPRDGLLRLLVD 180
VERLRHSATS+LLSRRDVVVVASVSCIYGLGTPQSYLDRSVEL+VG EVPRD LLRLLVD
Sbjct 146 VERLRHSATSSLLSRRDVVVVASVSCIYGLGTPQSYLDRSVELRVGTEVPRDALLRLLVD 205
Query 181 VQYTRNDMSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGEVIRQVD 240
VQYTRND+SFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTG+VIRQVD
Sbjct 206 VQYTRNDLSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGDVIRQVD 265
Query 241 SLRIFPATHYVAGPERMAHAVSAIEEELAERLAELESQGKLLEAQRLRMRTNYDIEMMRQ 300
SLRIFPATHYVAGPERMAHA+S IE+ELAERLAELE QGKLLEAQRLRMRTNYDIEMMRQ
Sbjct 266 SLRIFPATHYVAGPERMAHAISTIEQELAERLAELEGQGKLLEAQRLRMRTNYDIEMMRQ 325
Query 301 VGFCSGIENYSRHIDGRGPGTPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKR 360
VGFCSGIENYSRHIDGRGPG+PPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGD+SRKR
Sbjct 326 VGFCSGIENYSRHIDGRGPGSPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDMSRKR 385
Query 361 NLVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQTGGEFVEQVIRPTGLV 420
NLVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQTGGEFVEQVIRPTGLV
Sbjct 386 NLVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQTGGEFVEQVIRPTGLV 445
Query 421 DPKVVVKPTKGQIDDLIGEIRTRADADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSE 480
DPKVVVKPTKGQIDDLIGEIR R +AD+RVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSE
Sbjct 446 DPKVVVKPTKGQIDDLIGEIRKRTEADERVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSE 505
Query 481 VDTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTI 540
VDTLRRVELLRQLRLG+YDVLVGINLLREGLDLPEVSLVAILDADKEGFLRS+RSLIQTI
Sbjct 506 VDTLRRVELLRQLRLGEYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSARSLIQTI 565
Query 541 GRAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNEANGIDPQPLRKKIADILDQ 600
GRAARNVSGEVHMYAD IT+SM+EAIDETERRRAKQIAYNEA+GIDPQPLRKKIADILDQ
Sbjct 566 GRAARNVSGEVHMYADTITESMKEAIDETERRRAKQIAYNEAHGIDPQPLRKKIADILDQ 625
Query 601 VYREADDTAVVEVGGSGRNASRGRRAQGEPGRAVSAGVFEGRDTSAMPRAELADLIKDLT 660
VYREADDT VE+ GSGR+ SRGRRAQGEPGRAVSAG+ EGRDT+ MPRAELADLIKDLT
Sbjct 626 VYREADDTDTVEI-GSGRSMSRGRRAQGEPGRAVSAGIVEGRDTTNMPRAELADLIKDLT 684
Query 661 AQMMAAARDLQFELAARFRDEIADLKRELRGMDAAGLK 698
AQMMAAARDLQFELAARFRDEIADLK+ELRGMDAAGLK
Sbjct 685 AQMMAAARDLQFELAARFRDEIADLKKELRGMDAAGLK 722
>gi|15827723|ref|NP_301986.1| excinuclease ABC subunit B [Mycobacterium leprae TN]
gi|221230200|ref|YP_002503616.1| excinuclease ABC subunit B [Mycobacterium leprae Br4923]
gi|13431967|sp|P57991.1|UVRB_MYCLE RecName: Full=UvrABC system protein B; Short=Protein uvrB; AltName:
Full=Excinuclease ABC subunit B
gi|13093274|emb|CAC31768.1| excinuclease ABC subunit B [Mycobacterium leprae]
gi|219933307|emb|CAR71482.1| excinuclease ABC subunit B [Mycobacterium leprae Br4923]
Length=698
Score = 1322 bits (3422), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 661/698 (95%), Positives = 675/698 (97%), Gaps = 0/698 (0%)
Query 1 VRAGGHFEVVSPHAPAGDQPAAIDELERRINAGERDVVLLGATGTGKSATTAWLIERLQR 60
+R GG FEV+SPH PAGDQPAAIDEL+RRI AGERDVVLLGATGTGKSATTAWLIERLQR
Sbjct 1 MRVGGRFEVISPHEPAGDQPAAIDELQRRILAGERDVVLLGATGTGKSATTAWLIERLQR 60
Query 61 PTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD 120
PTLVMAPNKTLAAQLANELR MLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD
Sbjct 61 PTLVMAPNKTLAAQLANELRGMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD 120
Query 121 VERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVELKVGEEVPRDGLLRLLVD 180
VERLRHSATS+LLSRRDVVVVASVSCIYGLGTPQSYLDRSVEL V EVPRDGLLRLLVD
Sbjct 121 VERLRHSATSSLLSRRDVVVVASVSCIYGLGTPQSYLDRSVELAVSNEVPRDGLLRLLVD 180
Query 181 VQYTRNDMSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGEVIRQVD 240
VQYTRND+SFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGEVIRQVD
Sbjct 181 VQYTRNDLSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGEVIRQVD 240
Query 241 SLRIFPATHYVAGPERMAHAVSAIEEELAERLAELESQGKLLEAQRLRMRTNYDIEMMRQ 300
SLRIFPATHYVAGPERMA A+SAIEEELAERLAE E QGKLLEAQRLRMRTNYDIEMMRQ
Sbjct 241 SLRIFPATHYVAGPERMAQAISAIEEELAERLAEFERQGKLLEAQRLRMRTNYDIEMMRQ 300
Query 301 VGFCSGIENYSRHIDGRGPGTPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKR 360
VGFCSGIENYSRHIDGRGPGTPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGD+SRKR
Sbjct 301 VGFCSGIENYSRHIDGRGPGTPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDMSRKR 360
Query 361 NLVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQTGGEFVEQVIRPTGLV 420
NLVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQ+GGEFVEQVIRPTGLV
Sbjct 361 NLVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQSGGEFVEQVIRPTGLV 420
Query 421 DPKVVVKPTKGQIDDLIGEIRTRADADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSE 480
DPKVVVKPTKGQIDDLIGEIR RA+ADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSE
Sbjct 421 DPKVVVKPTKGQIDDLIGEIRKRANADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSE 480
Query 481 VDTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTI 540
VDTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRS+RSLIQTI
Sbjct 481 VDTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSARSLIQTI 540
Query 541 GRAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNEANGIDPQPLRKKIADILDQ 600
GRAARNVSGEVHMYAD ITDSM EAIDETERRRAKQIAYN ANGIDPQPLRKKIADILDQ
Sbjct 541 GRAARNVSGEVHMYADTITDSMTEAIDETERRRAKQIAYNNANGIDPQPLRKKIADILDQ 600
Query 601 VYREADDTAVVEVGGSGRNASRGRRAQGEPGRAVSAGVFEGRDTSAMPRAELADLIKDLT 660
VYREADDT V+VGGSGRN SRGRRAQ EP R+VS GVFEGRDT+ MPRAELADLIKDLT
Sbjct 601 VYREADDTDTVQVGGSGRNVSRGRRAQSEPVRSVSVGVFEGRDTAGMPRAELADLIKDLT 660
Query 661 AQMMAAARDLQFELAARFRDEIADLKRELRGMDAAGLK 698
AQMMAAA DLQFELAARFRDEIADLK+ELRGMDAAGLK
Sbjct 661 AQMMAAASDLQFELAARFRDEIADLKKELRGMDAAGLK 698
>gi|333990449|ref|YP_004523063.1| excinuclease ABC (subunit B-helicase) UvrB [Mycobacterium sp.
JDM601]
gi|333486417|gb|AEF35809.1| excinuclease ABC (subunit B-helicase) UvrB [Mycobacterium sp.
JDM601]
Length=726
Score = 1313 bits (3397), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 645/701 (93%), Positives = 670/701 (96%), Gaps = 3/701 (0%)
Query 1 VRAGGHFEVVSPHAPAGDQPAAIDELERRINAGERDVVLLGATGTGKSATTAWLIERLQR 60
VRAGG FEVVS + PAGDQP AI EL+RRI AGE+DVVLLGATGTGKSAT AWLIERLQR
Sbjct 26 VRAGGRFEVVSDYQPAGDQPTAIAELDRRITAGEKDVVLLGATGTGKSATAAWLIERLQR 85
Query 61 PTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD 120
PTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD
Sbjct 86 PTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD 145
Query 121 VERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVELKVGEEVPRDGLLRLLVD 180
VERLRHSATS+LLSRRDVVVVASVSCIYGLGTPQSYLDRSVEL+VG EVPRDGLLRLLVD
Sbjct 146 VERLRHSATSSLLSRRDVVVVASVSCIYGLGTPQSYLDRSVELQVGSEVPRDGLLRLLVD 205
Query 181 VQYTRNDMSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGEVIRQVD 240
VQYTRNDM+FTRGSFRVRGDTVEIIPSYEELAVRIE+FGDEIEALYYLHPLTG+V+R+VD
Sbjct 206 VQYTRNDMAFTRGSFRVRGDTVEIIPSYEELAVRIEYFGDEIEALYYLHPLTGDVVRKVD 265
Query 241 SLRIFPATHYVAGPERMAHAVSAIEEELAERLAELESQGKLLEAQRLRMRTNYDIEMMRQ 300
SLRIFPATHYVAGPERM A+S IEEELA RL ELE GKLLEAQRLRMRTNYDIEMMRQ
Sbjct 266 SLRIFPATHYVAGPERMTQAISTIEEELAVRLDELERHGKLLEAQRLRMRTNYDIEMMRQ 325
Query 301 VGFCSGIENYSRHIDGRGPGTPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKR 360
VGFCSGIENYSRHIDGRG G+PPATLLDYFPEDFLL+IDESHVTVPQIGGMYEGD+SRKR
Sbjct 326 VGFCSGIENYSRHIDGRGAGSPPATLLDYFPEDFLLIIDESHVTVPQIGGMYEGDMSRKR 385
Query 361 NLVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQTGGEFVEQVIRPTGLV 420
NLVE+GFRLPSACDNRPLTWEEFADRIGQTVY+SATPGPYELSQ GEFVEQVIRPTGLV
Sbjct 386 NLVEFGFRLPSACDNRPLTWEEFADRIGQTVYMSATPGPYELSQAAGEFVEQVIRPTGLV 445
Query 421 DPKVVVKPTKGQIDDLIGEIRTRADADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSE 480
DPKVVVKPTKGQIDDLIGEIR RA+AD+RVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSE
Sbjct 446 DPKVVVKPTKGQIDDLIGEIRQRAEADERVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSE 505
Query 481 VDTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTI 540
VDTLRRVELLRQLRLGDYDVL+GINLLREGLDLPEVSLV+ILDADKEGFLRS+RSLIQTI
Sbjct 506 VDTLRRVELLRQLRLGDYDVLIGINLLREGLDLPEVSLVSILDADKEGFLRSTRSLIQTI 565
Query 541 GRAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNEANGIDPQPLRKKIADILDQ 600
GRAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNEANGIDPQPLRKKIADILDQ
Sbjct 566 GRAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNEANGIDPQPLRKKIADILDQ 625
Query 601 VYREADDTAVVEVGGSGRNASRGRRAQGEPGRA---VSAGVFEGRDTSAMPRAELADLIK 657
VYREA D+ VEV GSGRNASRGRRAQG PGRA VSAGVFEGRDT +MPRAELADLIK
Sbjct 626 VYREAADSETVEVAGSGRNASRGRRAQGAPGRAGQSVSAGVFEGRDTKSMPRAELADLIK 685
Query 658 DLTAQMMAAARDLQFELAARFRDEIADLKRELRGMDAAGLK 698
DLT QMM AARDLQFELAAR RDEIADLK+ELRGMDAAG+K
Sbjct 686 DLTEQMMNAARDLQFELAARIRDEIADLKKELRGMDAAGIK 726
>gi|183982451|ref|YP_001850742.1| excinuclease ABC (subunit B-helicase) UvrB [Mycobacterium marinum
M]
gi|183175777|gb|ACC40887.1| excinuclease ABC (subunit B-helicase) UvrB [Mycobacterium marinum
M]
Length=726
Score = 1309 bits (3388), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 658/701 (94%), Positives = 678/701 (97%), Gaps = 3/701 (0%)
Query 1 VRAGGHFEVVSPHAPAGDQPAAIDELERRINAGERDVVLLGATGTGKSATTAWLIERLQR 60
VR G FEV+SPH PAGDQPAAI+ELERRI AGERDVVLLGATGTGKSATTAWLIERLQR
Sbjct 26 VRTGASFEVISPHDPAGDQPAAINELERRIRAGERDVVLLGATGTGKSATTAWLIERLQR 85
Query 61 PTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD 120
PTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD
Sbjct 86 PTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD 145
Query 121 VERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVELKVGEEVPRDGLLRLLVD 180
VERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVEL+VG +VPRDGLLRLLVD
Sbjct 146 VERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVELQVGTDVPRDGLLRLLVD 205
Query 181 VQYTRNDMSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGEVIRQVD 240
VQYTRND+SFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTG+V+RQVD
Sbjct 206 VQYTRNDLSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGDVVRQVD 265
Query 241 SLRIFPATHYVAGPERMAHAVSAIEEELAERLAELESQGKLLEAQRLRMRTNYDIEMMRQ 300
SLRIFPATHYVAGPERMA A+S IEEELAERLAELE GKLLEAQRLRMRTNYDIEMMRQ
Sbjct 266 SLRIFPATHYVAGPERMAQAISTIEEELAERLAELEGHGKLLEAQRLRMRTNYDIEMMRQ 325
Query 301 VGFCSGIENYSRHIDGRGPGTPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKR 360
VGFCSGIENYSRHIDGR G+ PATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKR
Sbjct 326 VGFCSGIENYSRHIDGRPAGSAPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKR 385
Query 361 NLVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQTGGEFVEQVIRPTGLV 420
NLVE+GFRLPSA DNRPL WEEFADRIGQTVYLSATPGPYELSQ+GGEFVEQVIRPTGLV
Sbjct 386 NLVEFGFRLPSAVDNRPLQWEEFADRIGQTVYLSATPGPYELSQSGGEFVEQVIRPTGLV 445
Query 421 DPKVVVKPTKGQIDDLIGEIRTRADADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSE 480
DPKVVVKPTKGQIDDLIGEIR RA+ADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSE
Sbjct 446 DPKVVVKPTKGQIDDLIGEIRQRAEADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSE 505
Query 481 VDTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTI 540
VDTLRRVELLRQLRLG+YDVLVGINLLREGLDLPEVSLVAILDADKEGFLRS+RSLIQTI
Sbjct 506 VDTLRRVELLRQLRLGEYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSARSLIQTI 565
Query 541 GRAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNEANGIDPQPLRKKIADILDQ 600
GRAARNVSGEVHMYADKITDSM+EAIDETERRRAKQ+AYNEANGIDPQPLRKKIADILDQ
Sbjct 566 GRAARNVSGEVHMYADKITDSMKEAIDETERRRAKQVAYNEANGIDPQPLRKKIADILDQ 625
Query 601 VYREADDTAVVE---VGGSGRNASRGRRAQGEPGRAVSAGVFEGRDTSAMPRAELADLIK 657
VYREADDT E +GGSGRN+SRGRRAQGEPGRAVSAGVFEGRDTSAMPRAELADLIK
Sbjct 626 VYREADDTEAAESVPIGGSGRNSSRGRRAQGEPGRAVSAGVFEGRDTSAMPRAELADLIK 685
Query 658 DLTAQMMAAARDLQFELAARFRDEIADLKRELRGMDAAGLK 698
DLT+QMM AARDLQFELAARFRDEIADLK+ELRGMDAAGLK
Sbjct 686 DLTSQMMVAARDLQFELAARFRDEIADLKKELRGMDAAGLK 726
>gi|108799967|ref|YP_640164.1| excinuclease ABC subunit B [Mycobacterium sp. MCS]
gi|119869079|ref|YP_939031.1| excinuclease ABC subunit B [Mycobacterium sp. KMS]
gi|108770386|gb|ABG09108.1| Excinuclease ABC subunit B [Mycobacterium sp. MCS]
gi|119695168|gb|ABL92241.1| Excinuclease ABC subunit B [Mycobacterium sp. KMS]
Length=719
Score = 1308 bits (3385), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 636/698 (92%), Positives = 672/698 (97%), Gaps = 0/698 (0%)
Query 1 VRAGGHFEVVSPHAPAGDQPAAIDELERRINAGERDVVLLGATGTGKSATTAWLIERLQR 60
VR G FEVVSP+ PAGDQPAAIDELERRI AGERDVVLLGATGTGKSATTAWLIERLQR
Sbjct 22 VRTGNRFEVVSPYQPAGDQPAAIDELERRIRAGERDVVLLGATGTGKSATTAWLIERLQR 81
Query 61 PTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD 120
PTL+MAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD
Sbjct 82 PTLLMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD 141
Query 121 VERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVELKVGEEVPRDGLLRLLVD 180
VERLRHSATS+LLSRRDVVVVASVSCIYGLGTPQSY+DRSVELKVG+EVPRD LLRLLVD
Sbjct 142 VERLRHSATSSLLSRRDVVVVASVSCIYGLGTPQSYMDRSVELKVGDEVPRDALLRLLVD 201
Query 181 VQYTRNDMSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGEVIRQVD 240
VQY RNDM+FTRG+FRVRGDTVEIIPSYEELAVRIE+FGDE+EALYY+HPLTG+V+R+VD
Sbjct 202 VQYARNDMAFTRGTFRVRGDTVEIIPSYEELAVRIEYFGDEVEALYYMHPLTGDVVRRVD 261
Query 241 SLRIFPATHYVAGPERMAHAVSAIEEELAERLAELESQGKLLEAQRLRMRTNYDIEMMRQ 300
SLR+FPATHYVAGPERMA A+S+IE+EL +RLAELE QGKLLEAQRLRMRTNYDIEMMRQ
Sbjct 262 SLRVFPATHYVAGPERMAQAISSIEKELEDRLAELEGQGKLLEAQRLRMRTNYDIEMMRQ 321
Query 301 VGFCSGIENYSRHIDGRGPGTPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKR 360
VGFCSGIENYSRHIDGRGPGT PATL+DYFPEDFLLVIDESHVTVPQIGGMYEGD+SRKR
Sbjct 322 VGFCSGIENYSRHIDGRGPGTAPATLIDYFPEDFLLVIDESHVTVPQIGGMYEGDMSRKR 381
Query 361 NLVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQTGGEFVEQVIRPTGLV 420
NLV++GFRLPSA DNRPLTWEEFA RIGQTVYLSATPGPYE+SQ+GGEFVEQVIRPTGLV
Sbjct 382 NLVDFGFRLPSAVDNRPLTWEEFASRIGQTVYLSATPGPYEMSQSGGEFVEQVIRPTGLV 441
Query 421 DPKVVVKPTKGQIDDLIGEIRTRADADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSE 480
DP+V+VKPTKGQIDDLIGEIR R + D+RVLVTTLTKKMAEDLTDYLLE+GIRVRYLHSE
Sbjct 442 DPQVIVKPTKGQIDDLIGEIRKRTELDERVLVTTLTKKMAEDLTDYLLELGIRVRYLHSE 501
Query 481 VDTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTI 540
VDTLRRVELLRQLRLG+YDVLVGINLLREGLDLPEVSLVAILDADKEGFLRS+RSLIQTI
Sbjct 502 VDTLRRVELLRQLRLGEYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSTRSLIQTI 561
Query 541 GRAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNEANGIDPQPLRKKIADILDQ 600
GRAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNE GIDP+PLRKKIADILDQ
Sbjct 562 GRAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNEERGIDPKPLRKKIADILDQ 621
Query 601 VYREADDTAVVEVGGSGRNASRGRRAQGEPGRAVSAGVFEGRDTSAMPRAELADLIKDLT 660
VYREADD+ VEVGGSGRNASRGRRAQGEPGRAVSAG+ EGRDT+ MPRAELADLIKDLT
Sbjct 622 VYREADDSETVEVGGSGRNASRGRRAQGEPGRAVSAGIVEGRDTANMPRAELADLIKDLT 681
Query 661 AQMMAAARDLQFELAARFRDEIADLKRELRGMDAAGLK 698
QMM AARDLQFELAAR RDEI DLK+ELRGMDAAGLK
Sbjct 682 EQMMTAARDLQFELAARIRDEIQDLKKELRGMDAAGLK 719
>gi|118617256|ref|YP_905588.1| excinuclease ABC subunit B [Mycobacterium ulcerans Agy99]
gi|189037984|sp|A0PP48.1|UVRB_MYCUA RecName: Full=UvrABC system protein B; Short=Protein uvrB; AltName:
Full=Excinuclease ABC subunit B
gi|118569366|gb|ABL04117.1| excinuclease ABC (subunit B-helicase) UvrB [Mycobacterium ulcerans
Agy99]
Length=701
Score = 1295 bits (3351), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 651/701 (93%), Positives = 673/701 (97%), Gaps = 3/701 (0%)
Query 1 VRAGGHFEVVSPHAPAGDQPAAIDELERRINAGERDVVLLGATGTGKSATTAWLIERLQR 60
+R G FEV+SPH PAGDQPAAI+ELERRI AGERDVVLLGATGTGKSATTAWLIERLQR
Sbjct 1 MRTGASFEVISPHDPAGDQPAAINELERRIRAGERDVVLLGATGTGKSATTAWLIERLQR 60
Query 61 PTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD 120
PTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD
Sbjct 61 PTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD 120
Query 121 VERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVELKVGEEVPRDGLLRLLVD 180
VERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVEL+VG +VPRDGLLRLLVD
Sbjct 121 VERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVELQVGTDVPRDGLLRLLVD 180
Query 181 VQYTRNDMSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGEVIRQVD 240
VQYTRND+SFTRGSFRVRGDTVEIIPSYE+LAVRIEFFGD IEALYYLHPLTG+V+RQVD
Sbjct 181 VQYTRNDLSFTRGSFRVRGDTVEIIPSYEDLAVRIEFFGDGIEALYYLHPLTGDVVRQVD 240
Query 241 SLRIFPATHYVAGPERMAHAVSAIEEELAERLAELESQGKLLEAQRLRMRTNYDIEMMRQ 300
SLRIFPATHYVAGPERMA A+S IEEELAERLAELE GKLLEA RLRMRTNYDIEMMRQ
Sbjct 241 SLRIFPATHYVAGPERMAQAISTIEEELAERLAELEGHGKLLEAHRLRMRTNYDIEMMRQ 300
Query 301 VGFCSGIENYSRHIDGRGPGTPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKR 360
VGFCSGIENYSRHIDGR G+ PATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKR
Sbjct 301 VGFCSGIENYSRHIDGRPAGSAPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKR 360
Query 361 NLVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQTGGEFVEQVIRPTGLV 420
NLVE+GFRLPSA DNRPL WEEFADRIGQTVYLSATPGPYELSQ+GGEFVEQVIRPTGLV
Sbjct 361 NLVEFGFRLPSAVDNRPLQWEEFADRIGQTVYLSATPGPYELSQSGGEFVEQVIRPTGLV 420
Query 421 DPKVVVKPTKGQIDDLIGEIRTRADADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSE 480
DPKVVVKPTKGQIDDLIGEIR RA+ DQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSE
Sbjct 421 DPKVVVKPTKGQIDDLIGEIRQRAEVDQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSE 480
Query 481 VDTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTI 540
VDTLRRVELLRQLRLG+YDVLVGINLLREGLDLPEVSLVAILDADKEGFLRS+RSLIQTI
Sbjct 481 VDTLRRVELLRQLRLGEYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSARSLIQTI 540
Query 541 GRAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNEANGIDPQPLRKKIADILDQ 600
GRAARNVSGEVHMYADKITDSM+EAIDETERRRAKQ+AYNEANGIDPQPLRKKIADILDQ
Sbjct 541 GRAARNVSGEVHMYADKITDSMKEAIDETERRRAKQVAYNEANGIDPQPLRKKIADILDQ 600
Query 601 VYREADDTAVVE---VGGSGRNASRGRRAQGEPGRAVSAGVFEGRDTSAMPRAELADLIK 657
VYREADDT E +GGSGRN+SRGRRAQGEPGRAVSAGVFEGRDTS MPRAELADLIK
Sbjct 601 VYREADDTEAAESVPIGGSGRNSSRGRRAQGEPGRAVSAGVFEGRDTSTMPRAELADLIK 660
Query 658 DLTAQMMAAARDLQFELAARFRDEIADLKRELRGMDAAGLK 698
DLT+QMM AARDLQFELAARFRDEIADLK+ELRGMDAAGL
Sbjct 661 DLTSQMMVAARDLQFELAARFRDEIADLKKELRGMDAAGLN 701
>gi|118472594|ref|YP_888108.1| excinuclease ABC subunit B [Mycobacterium smegmatis str. MC2
155]
gi|118173881|gb|ABK74777.1| excinuclease ABC, B subunit [Mycobacterium smegmatis str. MC2
155]
Length=736
Score = 1295 bits (3350), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 644/698 (93%), Positives = 677/698 (97%), Gaps = 0/698 (0%)
Query 1 VRAGGHFEVVSPHAPAGDQPAAIDELERRINAGERDVVLLGATGTGKSATTAWLIERLQR 60
VR G FEVVSP+APAGDQPAAIDELERRI AGERDVVLLGATGTGKSATTAWLIERLQR
Sbjct 39 VRTGKPFEVVSPYAPAGDQPAAIDELERRIRAGERDVVLLGATGTGKSATTAWLIERLQR 98
Query 61 PTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD 120
PTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD
Sbjct 99 PTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD 158
Query 121 VERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVELKVGEEVPRDGLLRLLVD 180
VERLRHSATS+LLSRRDVVVVASVSCIYGLGTPQSYLDRSVEL+VG+EVPRDGLLRLLVD
Sbjct 159 VERLRHSATSSLLSRRDVVVVASVSCIYGLGTPQSYLDRSVELQVGQEVPRDGLLRLLVD 218
Query 181 VQYTRNDMSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGEVIRQVD 240
VQY RND++FTRG+FRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTG+V+RQV+
Sbjct 219 VQYNRNDVAFTRGTFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGDVVRQVE 278
Query 241 SLRIFPATHYVAGPERMAHAVSAIEEELAERLAELESQGKLLEAQRLRMRTNYDIEMMRQ 300
SLRIFPATHYVAGPERMA A+ +IE+EL ERLAELE+QGKLLEAQRLRMRTNYD+EMMRQ
Sbjct 279 SLRIFPATHYVAGPERMAAAIESIEKELEERLAELENQGKLLEAQRLRMRTNYDVEMMRQ 338
Query 301 VGFCSGIENYSRHIDGRGPGTPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKR 360
VGFCSGIENYSRHIDGR G+ PATLLDYFPEDFLLVIDESHVTVPQIGGMYEGD+SRKR
Sbjct 339 VGFCSGIENYSRHIDGRPAGSAPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDMSRKR 398
Query 361 NLVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQTGGEFVEQVIRPTGLV 420
NLV++GFRLPSA DNRPLTWEEFA+RIGQTVYLSATPGPYE+SQ GGEFVEQVIRPTGLV
Sbjct 399 NLVDFGFRLPSAVDNRPLTWEEFAERIGQTVYLSATPGPYEISQAGGEFVEQVIRPTGLV 458
Query 421 DPKVVVKPTKGQIDDLIGEIRTRADADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSE 480
DPKVVVKPTKGQIDDLIGEIRTR + D+RVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSE
Sbjct 459 DPKVVVKPTKGQIDDLIGEIRTRTERDERVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSE 518
Query 481 VDTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTI 540
VDTLRRVELLRQLRLG+YDVLVGINLLREGLDLPEVSLV+ILDADKEGFLRS+RSLIQTI
Sbjct 519 VDTLRRVELLRQLRLGEYDVLVGINLLREGLDLPEVSLVSILDADKEGFLRSTRSLIQTI 578
Query 541 GRAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNEANGIDPQPLRKKIADILDQ 600
GRAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNEANGIDP+PLRKKIADILDQ
Sbjct 579 GRAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNEANGIDPKPLRKKIADILDQ 638
Query 601 VYREADDTAVVEVGGSGRNASRGRRAQGEPGRAVSAGVFEGRDTSAMPRAELADLIKDLT 660
VYREADDT VE+GGSGRN+SRGRRAQGEPGRAVSAG+ EG+DTS MPRAELADLIK+LT
Sbjct 639 VYREADDTESVEIGGSGRNSSRGRRAQGEPGRAVSAGIVEGKDTSNMPRAELADLIKELT 698
Query 661 AQMMAAARDLQFELAARFRDEIADLKRELRGMDAAGLK 698
QMMAAARDLQFELAAR RDEIADLK+ELRGMDAAGLK
Sbjct 699 DQMMAAARDLQFELAARIRDEIADLKKELRGMDAAGLK 736
>gi|145224140|ref|YP_001134818.1| excinuclease ABC subunit B [Mycobacterium gilvum PYR-GCK]
gi|145216626|gb|ABP46030.1| Excinuclease ABC subunit B [Mycobacterium gilvum PYR-GCK]
Length=719
Score = 1292 bits (3344), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 636/698 (92%), Positives = 665/698 (96%), Gaps = 0/698 (0%)
Query 1 VRAGGHFEVVSPHAPAGDQPAAIDELERRINAGERDVVLLGATGTGKSATTAWLIERLQR 60
VR+G FEVVS + PAGDQPAAI+ELERRI AGE+DVVLLGATGTGKSATTAWLIERLQR
Sbjct 22 VRSGARFEVVSEYEPAGDQPAAIEELERRIRAGEKDVVLLGATGTGKSATTAWLIERLQR 81
Query 61 PTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD 120
PTLVMAPNKTLAAQLANELREMLP+NAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD
Sbjct 82 PTLVMAPNKTLAAQLANELREMLPNNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD 141
Query 121 VERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVELKVGEEVPRDGLLRLLVD 180
VERLRHSATS LLSRRDVVVVASVSCIYGLGTPQSY+DRSVELKVG+EVPRD LLRLLVD
Sbjct 142 VERLRHSATSNLLSRRDVVVVASVSCIYGLGTPQSYMDRSVELKVGDEVPRDSLLRLLVD 201
Query 181 VQYTRNDMSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGEVIRQVD 240
VQYTRNDMSFTRG+FRVRGDTVEIIPSYEELAVRIEFFGDEIE LYYLHPLTG++IR+VD
Sbjct 202 VQYTRNDMSFTRGTFRVRGDTVEIIPSYEELAVRIEFFGDEIEELYYLHPLTGDIIRKVD 261
Query 241 SLRIFPATHYVAGPERMAHAVSAIEEELAERLAELESQGKLLEAQRLRMRTNYDIEMMRQ 300
SLRIFPATHYVAGPERMA A+S IE EL RLAELE QGKLLEAQRLRMRTNYDIEMMRQ
Sbjct 262 SLRIFPATHYVAGPERMAAAISTIEAELEARLAELEGQGKLLEAQRLRMRTNYDIEMMRQ 321
Query 301 VGFCSGIENYSRHIDGRGPGTPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKR 360
VGFCSGIENYSRHIDGR G+ PATLLDYFPEDFLLVIDESHVTVPQIGGMYEGD+SRKR
Sbjct 322 VGFCSGIENYSRHIDGRPAGSAPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDMSRKR 381
Query 361 NLVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQTGGEFVEQVIRPTGLV 420
NLV++GFRLPSA DNRPLTWEEFADRIGQTVYLSATPG +EL+QTGGEFVEQVIRPTGLV
Sbjct 382 NLVDFGFRLPSAVDNRPLTWEEFADRIGQTVYLSATPGNFELAQTGGEFVEQVIRPTGLV 441
Query 421 DPKVVVKPTKGQIDDLIGEIRTRADADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSE 480
DP+V+VKPTKGQIDDLIGEIR R + D+RVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSE
Sbjct 442 DPQVIVKPTKGQIDDLIGEIRKRTERDERVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSE 501
Query 481 VDTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTI 540
VDTLRRVELLRQLRLG+YDVL+GINLLREGLDLPEVSLVAILDADKEGFLRS RSLIQTI
Sbjct 502 VDTLRRVELLRQLRLGEYDVLIGINLLREGLDLPEVSLVAILDADKEGFLRSPRSLIQTI 561
Query 541 GRAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNEANGIDPQPLRKKIADILDQ 600
GRAARNVSGEVHMYADKITDSM++AIDETERRRAKQIAYN GIDPQPLRKKIADILDQ
Sbjct 562 GRAARNVSGEVHMYADKITDSMKQAIDETERRRAKQIAYNTERGIDPQPLRKKIADILDQ 621
Query 601 VYREADDTAVVEVGGSGRNASRGRRAQGEPGRAVSAGVFEGRDTSAMPRAELADLIKDLT 660
VYREADDT VE+GGSGRNASRGRRA GEPGRAVSAGV+EGRDT MPRAELADLIKDLT
Sbjct 622 VYREADDTEAVEIGGSGRNASRGRRAPGEPGRAVSAGVYEGRDTKNMPRAELADLIKDLT 681
Query 661 AQMMAAARDLQFELAARFRDEIADLKRELRGMDAAGLK 698
AQMMAAARDLQFELAAR RDEI DLK+ELRGMDAAGLK
Sbjct 682 AQMMAAARDLQFELAARIRDEIQDLKKELRGMDAAGLK 719
>gi|315444476|ref|YP_004077355.1| excinuclease ABC subunit B [Mycobacterium sp. Spyr1]
gi|315262779|gb|ADT99520.1| Excinuclease ABC subunit B [Mycobacterium sp. Spyr1]
Length=719
Score = 1288 bits (3333), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 635/698 (91%), Positives = 663/698 (95%), Gaps = 0/698 (0%)
Query 1 VRAGGHFEVVSPHAPAGDQPAAIDELERRINAGERDVVLLGATGTGKSATTAWLIERLQR 60
VR+G FEVVS + PAGDQPAAI ELERRI AGE+DVVLLGATGTGKSATTAWLIERLQR
Sbjct 22 VRSGARFEVVSEYEPAGDQPAAIKELERRIRAGEKDVVLLGATGTGKSATTAWLIERLQR 81
Query 61 PTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD 120
PTLVMAPNKTLAAQLANELREMLP+NAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD
Sbjct 82 PTLVMAPNKTLAAQLANELREMLPNNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD 141
Query 121 VERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVELKVGEEVPRDGLLRLLVD 180
VERLRHSATS LLSRRDVVVVASVSCIYGLGTPQSY+DRSVELKVG+EVPRD LLRLLVD
Sbjct 142 VERLRHSATSNLLSRRDVVVVASVSCIYGLGTPQSYMDRSVELKVGDEVPRDSLLRLLVD 201
Query 181 VQYTRNDMSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGEVIRQVD 240
VQYTRNDMSFTRG+FRVRGDTVEIIPSYEELAVRIEFFGDEIE LYYLHPLTG++IR+VD
Sbjct 202 VQYTRNDMSFTRGTFRVRGDTVEIIPSYEELAVRIEFFGDEIEELYYLHPLTGDIIRKVD 261
Query 241 SLRIFPATHYVAGPERMAHAVSAIEEELAERLAELESQGKLLEAQRLRMRTNYDIEMMRQ 300
SLRIFPATHYVAG ERMA A+S IE EL RLAELE QGKLLEAQRLRMRTNYDIEMMRQ
Sbjct 262 SLRIFPATHYVAGTERMAAAISTIEAELEARLAELEGQGKLLEAQRLRMRTNYDIEMMRQ 321
Query 301 VGFCSGIENYSRHIDGRGPGTPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKR 360
VGFCSGIENYSRHIDGR G+ PATLLDYFPEDFLLVIDESHVTVPQIGGMYEGD+SRKR
Sbjct 322 VGFCSGIENYSRHIDGRPAGSAPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDMSRKR 381
Query 361 NLVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQTGGEFVEQVIRPTGLV 420
NLV++GFRLPSA DNRPLTWEEFADRIGQTVYLSATPG +EL+QTGGEFVEQVIRPTGLV
Sbjct 382 NLVDFGFRLPSAVDNRPLTWEEFADRIGQTVYLSATPGNFELAQTGGEFVEQVIRPTGLV 441
Query 421 DPKVVVKPTKGQIDDLIGEIRTRADADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSE 480
DP+V+VKPTKGQIDDLIGEIR R + D+RVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSE
Sbjct 442 DPQVIVKPTKGQIDDLIGEIRKRTERDERVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSE 501
Query 481 VDTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTI 540
VDTLRRVELLRQLRLG+YDVL+GINLLREGLDLPEVSLVAILDADKEGFLRS RSLIQTI
Sbjct 502 VDTLRRVELLRQLRLGEYDVLIGINLLREGLDLPEVSLVAILDADKEGFLRSPRSLIQTI 561
Query 541 GRAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNEANGIDPQPLRKKIADILDQ 600
GRAARNVSGEVHMYADKITDSM++AIDETERRRAKQIAYN GIDPQPLRKKIADILDQ
Sbjct 562 GRAARNVSGEVHMYADKITDSMKQAIDETERRRAKQIAYNTERGIDPQPLRKKIADILDQ 621
Query 601 VYREADDTAVVEVGGSGRNASRGRRAQGEPGRAVSAGVFEGRDTSAMPRAELADLIKDLT 660
VYREADDT VE+GGSGRNASRGRRA GEPGRAVSAGV+EGRDT MPRAELADLIKDLT
Sbjct 622 VYREADDTEAVEIGGSGRNASRGRRAPGEPGRAVSAGVYEGRDTKNMPRAELADLIKDLT 681
Query 661 AQMMAAARDLQFELAARFRDEIADLKRELRGMDAAGLK 698
AQMMAAARDLQFELAAR RDEI DLK+ELRGMDAAGLK
Sbjct 682 AQMMAAARDLQFELAARIRDEIQDLKKELRGMDAAGLK 719
>gi|126435595|ref|YP_001071286.1| excinuclease ABC subunit B [Mycobacterium sp. JLS]
gi|126235395|gb|ABN98795.1| Excinuclease ABC subunit B [Mycobacterium sp. JLS]
Length=719
Score = 1288 bits (3332), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 638/698 (92%), Positives = 672/698 (97%), Gaps = 0/698 (0%)
Query 1 VRAGGHFEVVSPHAPAGDQPAAIDELERRINAGERDVVLLGATGTGKSATTAWLIERLQR 60
VR G FEVVSP+ PAGDQPAAIDELERRI AGERDVVLLGATGTGKSATTAWLIERLQR
Sbjct 22 VRTGNRFEVVSPYQPAGDQPAAIDELERRIRAGERDVVLLGATGTGKSATTAWLIERLQR 81
Query 61 PTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD 120
PTL+MAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD
Sbjct 82 PTLLMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD 141
Query 121 VERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVELKVGEEVPRDGLLRLLVD 180
VERLRHSATS+LLSRRDVVVVASVSCIYGLGTPQSY+DRSVELKVG+EVPRD LLRLLVD
Sbjct 142 VERLRHSATSSLLSRRDVVVVASVSCIYGLGTPQSYMDRSVELKVGDEVPRDALLRLLVD 201
Query 181 VQYTRNDMSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGEVIRQVD 240
VQY RNDM+FTRG+FRVRGDTVEIIPSYEELAVRIE+FGDE+EALYY+HPLTG+V+R+VD
Sbjct 202 VQYARNDMAFTRGTFRVRGDTVEIIPSYEELAVRIEYFGDEVEALYYMHPLTGDVVRRVD 261
Query 241 SLRIFPATHYVAGPERMAHAVSAIEEELAERLAELESQGKLLEAQRLRMRTNYDIEMMRQ 300
SLR+FPATHYVAGPERMA A+S+IE+EL ERLAELE QGKLLEAQRLRMRTNYDIEMMRQ
Sbjct 262 SLRVFPATHYVAGPERMAQAISSIEKELEERLAELEGQGKLLEAQRLRMRTNYDIEMMRQ 321
Query 301 VGFCSGIENYSRHIDGRGPGTPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKR 360
VGFCSGIENYSRHIDGRGPGT PATL+DYFPEDFLLVIDESHVTVPQIGGMYEGD+SRKR
Sbjct 322 VGFCSGIENYSRHIDGRGPGTAPATLIDYFPEDFLLVIDESHVTVPQIGGMYEGDMSRKR 381
Query 361 NLVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQTGGEFVEQVIRPTGLV 420
NLV++GFRLPSA DNRPLTWEEFA RIGQTVYLSATPGPYE+SQ+GGEFVEQVIRPTGLV
Sbjct 382 NLVDFGFRLPSAVDNRPLTWEEFASRIGQTVYLSATPGPYEMSQSGGEFVEQVIRPTGLV 441
Query 421 DPKVVVKPTKGQIDDLIGEIRTRADADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSE 480
DP+V+VKPTKGQIDDLIGEIR R + D+RVLVTTLTKKMAEDLTDYLLE+GIRVRYLHSE
Sbjct 442 DPQVIVKPTKGQIDDLIGEIRKRTELDERVLVTTLTKKMAEDLTDYLLELGIRVRYLHSE 501
Query 481 VDTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTI 540
VDTLRRVELLRQLRLG+YDVLVGINLLREGLDLPEVSLVAILDADKEGFLRS+RSLIQTI
Sbjct 502 VDTLRRVELLRQLRLGEYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSTRSLIQTI 561
Query 541 GRAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNEANGIDPQPLRKKIADILDQ 600
GRAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNE GIDP+PLRKKIADILDQ
Sbjct 562 GRAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNEERGIDPKPLRKKIADILDQ 621
Query 601 VYREADDTAVVEVGGSGRNASRGRRAQGEPGRAVSAGVFEGRDTSAMPRAELADLIKDLT 660
VYREADDT VEVGGSGRNASRGRRAQGEPGRAVSAG+ EGRDT+ MPRAELADLIKDLT
Sbjct 622 VYREADDTETVEVGGSGRNASRGRRAQGEPGRAVSAGIVEGRDTANMPRAELADLIKDLT 681
Query 661 AQMMAAARDLQFELAARFRDEIADLKRELRGMDAAGLK 698
QMM AARDLQFELAAR RDEI DLK+ELRGMDAAGLK
Sbjct 682 EQMMTAARDLQFELAARIRDEIQDLKKELRGMDAAGLK 719
>gi|120404324|ref|YP_954153.1| excinuclease ABC subunit B [Mycobacterium vanbaalenii PYR-1]
gi|119957142|gb|ABM14147.1| Excinuclease ABC subunit B [Mycobacterium vanbaalenii PYR-1]
Length=722
Score = 1280 bits (3311), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 642/701 (92%), Positives = 669/701 (96%), Gaps = 3/701 (0%)
Query 1 VRAGGHFEVVSPHAPAGDQPAAIDELERRINAGERDVVLLGATGTGKSATTAWLIERLQR 60
VR+G FEVVS PAGDQPAAIDELERRI AGE+DVVLLGATGTGKSATTAWLIERLQR
Sbjct 22 VRSGARFEVVSEFEPAGDQPAAIDELERRIRAGEKDVVLLGATGTGKSATTAWLIERLQR 81
Query 61 PTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD 120
PTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD
Sbjct 82 PTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD 141
Query 121 VERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVELKVGEEVPRDGLLRLLVD 180
VERLRHSATS LLSRRDVVVVASVSCIYGLGTPQSY+DRSVELKVG+EVPRDGLLRLLVD
Sbjct 142 VERLRHSATSNLLSRRDVVVVASVSCIYGLGTPQSYMDRSVELKVGDEVPRDGLLRLLVD 201
Query 181 VQYTRNDMSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGEVIRQVD 240
VQYTRNDM+FTRG+FRVRGDTVEIIPSYEELAVRIEFFGDEIE LYYLHPLTG++IR+VD
Sbjct 202 VQYTRNDMAFTRGTFRVRGDTVEIIPSYEELAVRIEFFGDEIEELYYLHPLTGDIIRKVD 261
Query 241 SLRIFPATHYVAGPERMAHAVSAIEEELAERLAELESQGKLLEAQRLRMRTNYDIEMMRQ 300
SLRIFPATHYVAGPERMA A+S IE EL ERLAELE QGKLLEAQRLRMRTNYDIEMMRQ
Sbjct 262 SLRIFPATHYVAGPERMAQAISTIEAELEERLAELEGQGKLLEAQRLRMRTNYDIEMMRQ 321
Query 301 VGFCSGIENYSRHIDGRGPGTPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKR 360
VGFCSGIENYSRHIDGR G+ PATLLDYFPEDFLLVIDESHVTVPQIGGMYEGD+SRKR
Sbjct 322 VGFCSGIENYSRHIDGRPAGSAPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDMSRKR 381
Query 361 NLVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQTGGEFVEQVIRPTGLV 420
NLV++GFRLPSA DNRPLTWEEFADRIGQTVYLSATPG YELSQ+GGEFVEQVIRPTGLV
Sbjct 382 NLVDFGFRLPSAVDNRPLTWEEFADRIGQTVYLSATPGSYELSQSGGEFVEQVIRPTGLV 441
Query 421 DPKVVVKPTKGQIDDLIGEIRTRADADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSE 480
DP+VVVKPTKGQIDDLIGEIR R + D+RVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSE
Sbjct 442 DPQVVVKPTKGQIDDLIGEIRKRTERDERVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSE 501
Query 481 VDTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTI 540
VDTLRRVELLRQLRLG+YDVLVGINLLREGLDLPEVSLVAILDADKEGFLRS RSLIQTI
Sbjct 502 VDTLRRVELLRQLRLGEYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSPRSLIQTI 561
Query 541 GRAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNEANGIDPQPLRKKIADILDQ 600
GRAARNVSGEVHMYADK+TDSM++AIDETERRRAKQ AYN+ +GIDP+PLRKKIADILDQ
Sbjct 562 GRAARNVSGEVHMYADKMTDSMKQAIDETERRRAKQTAYNKEHGIDPKPLRKKIADILDQ 621
Query 601 VYREADDTAVVE---VGGSGRNASRGRRAQGEPGRAVSAGVFEGRDTSAMPRAELADLIK 657
VYREADDT E +GGSGRNASRGRRAQGEPGRAVSAGVFEGRDTS MPRAELADLIK
Sbjct 622 VYREADDTEAAESVPIGGSGRNASRGRRAQGEPGRAVSAGVFEGRDTSNMPRAELADLIK 681
Query 658 DLTAQMMAAARDLQFELAARFRDEIADLKRELRGMDAAGLK 698
DLTAQMMAAARDLQFELAAR RDEIADLK+ELRGMDAAGLK
Sbjct 682 DLTAQMMAAARDLQFELAARIRDEIADLKKELRGMDAAGLK 722
>gi|169629394|ref|YP_001703043.1| excinuclease ABC subunit B [Mycobacterium abscessus ATCC 19977]
gi|169241361|emb|CAM62389.1| UvrABC system protein B (UvrB protein) excinuclease [Mycobacterium
abscessus]
Length=719
Score = 1260 bits (3261), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 628/698 (90%), Positives = 658/698 (95%), Gaps = 0/698 (0%)
Query 1 VRAGGHFEVVSPHAPAGDQPAAIDELERRINAGERDVVLLGATGTGKSATTAWLIERLQR 60
+R G FEVVS + PAGDQP AI ELERR+ AGE+DVVLLGATGTGKSATTAWLIERLQR
Sbjct 22 LRTEGRFEVVSQYEPAGDQPGAIAELERRVRAGEKDVVLLGATGTGKSATTAWLIERLQR 81
Query 61 PTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD 120
PTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD
Sbjct 82 PTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD 141
Query 121 VERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVELKVGEEVPRDGLLRLLVD 180
VERLRHSATS LLSRRDVVVVASVSCIYGLGTPQSYLDRSV+L VG EVPRD LLRLLVD
Sbjct 142 VERLRHSATSNLLSRRDVVVVASVSCIYGLGTPQSYLDRSVQLDVGLEVPRDALLRLLVD 201
Query 181 VQYTRNDMSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGEVIRQVD 240
+QY RNDM+FTRG+FRVRGDTVEIIPSYEELAVRIEFFGDE+EALYYLHPLTG+V+RQ +
Sbjct 202 MQYNRNDMAFTRGTFRVRGDTVEIIPSYEELAVRIEFFGDEVEALYYLHPLTGDVVRQTN 261
Query 241 SLRIFPATHYVAGPERMAHAVSAIEEELAERLAELESQGKLLEAQRLRMRTNYDIEMMRQ 300
SLRIFPATHYVAGPERM A+ IE+EL ERL+ELE QGKLLEAQRLRMRTNYDIEMMR
Sbjct 262 SLRIFPATHYVAGPERMGKALEGIEQELEERLSELEGQGKLLEAQRLRMRTNYDIEMMRN 321
Query 301 VGFCSGIENYSRHIDGRGPGTPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKR 360
VGFCSGIENYSRHIDGRG GTPPATLLDYFP+DFLLVIDESHVTVPQIG MYEGD+SRKR
Sbjct 322 VGFCSGIENYSRHIDGRGAGTPPATLLDYFPDDFLLVIDESHVTVPQIGAMYEGDMSRKR 381
Query 361 NLVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQTGGEFVEQVIRPTGLV 420
NLV++GFRLPSA DNRPLTWEEFADRIGQTVYLSATPG YE S GGEFVEQVIRPTGLV
Sbjct 382 NLVDFGFRLPSAVDNRPLTWEEFADRIGQTVYLSATPGNYERSAAGGEFVEQVIRPTGLV 441
Query 421 DPKVVVKPTKGQIDDLIGEIRTRADADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSE 480
DPKVVVKPTKGQIDDLI IR R +AD+RVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSE
Sbjct 442 DPKVVVKPTKGQIDDLIASIRQRTEADERVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSE 501
Query 481 VDTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTI 540
VDTLRRVELLRQLRLG+YDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTI
Sbjct 502 VDTLRRVELLRQLRLGEYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTI 561
Query 541 GRAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNEANGIDPQPLRKKIADILDQ 600
GRAARNVSGEVHMYAD +TDSM+EAIDET+RRRAKQIAYN+ANGIDPQPLRKKIADILDQ
Sbjct 562 GRAARNVSGEVHMYADTMTDSMKEAIDETDRRRAKQIAYNQANGIDPQPLRKKIADILDQ 621
Query 601 VYREADDTAVVEVGGSGRNASRGRRAQGEPGRAVSAGVFEGRDTSAMPRAELADLIKDLT 660
VYREA+DT V VGGSGRN+SRGRRAQGEPGRAVSAGVFEGRDT MPRAELADLIKD+T
Sbjct 622 VYREAEDTEEVAVGGSGRNSSRGRRAQGEPGRAVSAGVFEGRDTKTMPRAELADLIKDMT 681
Query 661 AQMMAAARDLQFELAARFRDEIADLKRELRGMDAAGLK 698
QMM AARDLQFELAARFRDEIADLK+ELRGMDAAGLK
Sbjct 682 EQMMTAARDLQFELAARFRDEIADLKKELRGMDAAGLK 719
>gi|111017990|ref|YP_700962.1| excinuclease ABC subunit B [Rhodococcus jostii RHA1]
gi|110817520|gb|ABG92804.1| excision nuclease ABC subunit B [Rhodococcus jostii RHA1]
Length=746
Score = 1249 bits (3233), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 612/698 (88%), Positives = 657/698 (95%), Gaps = 1/698 (0%)
Query 2 RAGGHFEVVSPHAPAGDQPAAIDELERRINAGERDVVLLGATGTGKSATTAWLIERLQRP 61
R+ FEVVS H PAGDQPAAI +LERRINAGE+DVVLLGATGTGKSATTAWLIE++QRP
Sbjct 49 RSEARFEVVSDHKPAGDQPAAIADLERRINAGEKDVVLLGATGTGKSATTAWLIEKVQRP 108
Query 62 TLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDDV 121
TLVMAPNKTLAAQLANELR+MLP+N+VEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDDV
Sbjct 109 TLVMAPNKTLAAQLANELRDMLPNNSVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDDV 168
Query 122 ERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVELKVGEEVPRDGLLRLLVDV 181
ERLRHSATS+LLSRRDVVVVASVSCIYGLGTPQSYLDRSV+L+VG EVPRD LLRLLVDV
Sbjct 169 ERLRHSATSSLLSRRDVVVVASVSCIYGLGTPQSYLDRSVQLEVGVEVPRDALLRLLVDV 228
Query 182 QYTRNDMSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGEVIRQVDS 241
QYTRND++FTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTG+V+R+VDS
Sbjct 229 QYTRNDLAFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGDVVRKVDS 288
Query 242 LRIFPATHYVAGPERMAHAVSAIEEELAERLAELESQGKLLEAQRLRMRTNYDIEMMRQV 301
+RIFPATHYVAGPERM AV IE EL ERLA+LE +GKLLEAQRLRMRT YD+EM++QV
Sbjct 289 VRIFPATHYVAGPERMERAVKDIEAELEERLADLEGKGKLLEAQRLRMRTQYDLEMIKQV 348
Query 302 GFCSGIENYSRHIDGRGPGTPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKRN 361
GFCSGIENYSRHIDGRGPGT PATL+DYFPEDFLLVIDESHVTVPQIG MYEGD+SRKRN
Sbjct 349 GFCSGIENYSRHIDGRGPGTAPATLIDYFPEDFLLVIDESHVTVPQIGAMYEGDMSRKRN 408
Query 362 LVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQTGGEFVEQVIRPTGLVD 421
LVE+GFRLPSA DNRPLTWEEF RIGQTVYLSATPG YEL Q GGEFVEQVIRPTGLVD
Sbjct 409 LVEFGFRLPSATDNRPLTWEEFTQRIGQTVYLSATPGKYELGQAGGEFVEQVIRPTGLVD 468
Query 422 PKVVVKPTKGQIDDLIGEIRTRADADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSEV 481
P+VVVKPTKGQIDDL+ EIR RAD D+RVLVTTLTKKMAEDLTDYLLE+GIRVRYLHS++
Sbjct 469 PQVVVKPTKGQIDDLVHEIRERADRDERVLVTTLTKKMAEDLTDYLLELGIRVRYLHSDI 528
Query 482 DTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTIG 541
DTLRRVELLRQLRLG+YDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSS SLIQTIG
Sbjct 529 DTLRRVELLRQLRLGEYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSTSLIQTIG 588
Query 542 RAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNEANGIDPQPLRKKIADILDQV 601
RAARNVSG+VHMYADKITDSM+ AI+ETERRR KQIAYNE G+DPQPLRKKIADILDQV
Sbjct 589 RAARNVSGQVHMYADKITDSMQHAIEETERRREKQIAYNEKMGVDPQPLRKKIADILDQV 648
Query 602 YREADDTAV-VEVGGSGRNASRGRRAQGEPGRAVSAGVFEGRDTSAMPRAELADLIKDLT 660
Y EA+DTA V+VGGSGRNA+RGRRAQGE GR+VSAGV+EGRDT +MPRAELADL+K+LT
Sbjct 649 YEEAEDTASGVDVGGSGRNATRGRRAQGEAGRSVSAGVYEGRDTKSMPRAELADLVKELT 708
Query 661 AQMMAAARDLQFELAARFRDEIADLKRELRGMDAAGLK 698
QMM AARDLQFELA R RDEIADLK+ELRGMDAAGLK
Sbjct 709 NQMMNAARDLQFELAGRLRDEIADLKKELRGMDAAGLK 746
>gi|226360119|ref|YP_002777897.1| excinuclease ABC subunit B [Rhodococcus opacus B4]
gi|226238604|dbj|BAH48952.1| UvrABC system protein B [Rhodococcus opacus B4]
Length=720
Score = 1249 bits (3231), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 611/698 (88%), Positives = 657/698 (95%), Gaps = 1/698 (0%)
Query 2 RAGGHFEVVSPHAPAGDQPAAIDELERRINAGERDVVLLGATGTGKSATTAWLIERLQRP 61
R+ FEVVS H PAGDQP AI +LERRINAGE+DVVLLGATGTGKSATTAWLIE++QRP
Sbjct 23 RSEARFEVVSDHKPAGDQPTAIADLERRINAGEKDVVLLGATGTGKSATTAWLIEKVQRP 82
Query 62 TLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDDV 121
TLVMAPNKTLAAQLANELR+MLP+N+VEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDDV
Sbjct 83 TLVMAPNKTLAAQLANELRDMLPNNSVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDDV 142
Query 122 ERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVELKVGEEVPRDGLLRLLVDV 181
ERLRHSATS+LLSRRDVVVVASVSCIYGLGTPQSYLDRSV+L+VG EVPRD LLRLLVDV
Sbjct 143 ERLRHSATSSLLSRRDVVVVASVSCIYGLGTPQSYLDRSVQLEVGVEVPRDALLRLLVDV 202
Query 182 QYTRNDMSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGEVIRQVDS 241
QYTRND++FTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTG+V+R+VDS
Sbjct 203 QYTRNDLAFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGDVVRKVDS 262
Query 242 LRIFPATHYVAGPERMAHAVSAIEEELAERLAELESQGKLLEAQRLRMRTNYDIEMMRQV 301
+RIFPATHYVAGPERM AV IE EL ERLA+LE++GKLLEAQRLRMRT YD+EM++QV
Sbjct 263 VRIFPATHYVAGPERMERAVKDIEAELEERLADLENKGKLLEAQRLRMRTQYDLEMIKQV 322
Query 302 GFCSGIENYSRHIDGRGPGTPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKRN 361
GFCSGIENYSRHIDGRGPGT PATL+DYFPEDFLLVIDESHVTVPQIG MYEGD+SRKRN
Sbjct 323 GFCSGIENYSRHIDGRGPGTAPATLIDYFPEDFLLVIDESHVTVPQIGAMYEGDMSRKRN 382
Query 362 LVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQTGGEFVEQVIRPTGLVD 421
LVE+GFRLPSA DNRPLTWEEF RIGQTVYLSATPG YEL Q GGEFVEQVIRPTGLVD
Sbjct 383 LVEFGFRLPSATDNRPLTWEEFTQRIGQTVYLSATPGKYELGQAGGEFVEQVIRPTGLVD 442
Query 422 PKVVVKPTKGQIDDLIGEIRTRADADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSEV 481
P+VVVKPTKGQIDDL+ EIR RAD D+RVLVTTLTKKMAEDLTDYLLE+GIRVRYLHS++
Sbjct 443 PEVVVKPTKGQIDDLVHEIRERADRDERVLVTTLTKKMAEDLTDYLLELGIRVRYLHSDI 502
Query 482 DTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTIG 541
DTLRRVELLRQLRLG+YDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSS SLIQTIG
Sbjct 503 DTLRRVELLRQLRLGEYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSTSLIQTIG 562
Query 542 RAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNEANGIDPQPLRKKIADILDQV 601
RAARNVSG+VHMYADKITDSM+ AI+ETERRR KQIAYNE G+DPQPLRKKIADILDQV
Sbjct 563 RAARNVSGQVHMYADKITDSMQHAIEETERRREKQIAYNEKMGVDPQPLRKKIADILDQV 622
Query 602 YREADDTAV-VEVGGSGRNASRGRRAQGEPGRAVSAGVFEGRDTSAMPRAELADLIKDLT 660
Y EA+DTA V+VGGSGRNA+RGRRAQGE GR+VSAGV+EGRDT +MPRAELADL+K+LT
Sbjct 623 YEEAEDTASGVDVGGSGRNATRGRRAQGEAGRSVSAGVYEGRDTKSMPRAELADLVKELT 682
Query 661 AQMMAAARDLQFELAARFRDEIADLKRELRGMDAAGLK 698
QMM AARDLQFELA R RDEIADLK+ELRGMDAAGLK
Sbjct 683 DQMMNAARDLQFELAGRLRDEIADLKKELRGMDAAGLK 720
>gi|54023870|ref|YP_118112.1| excinuclease ABC subunit B [Nocardia farcinica IFM 10152]
gi|54015378|dbj|BAD56748.1| putative excision nuclease ABC subunit B [Nocardia farcinica
IFM 10152]
Length=721
Score = 1234 bits (3194), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 622/696 (90%), Positives = 655/696 (95%), Gaps = 3/696 (0%)
Query 2 RAGGHFEVVSPHAPAGDQPAAIDELERRINAGERDVVLLGATGTGKSATTAWLIERLQRP 61
RA G F+VVS H PAGDQPAAIDELERRI AGE+DVVLLGATGTGKSATTAWLIERLQRP
Sbjct 28 RAEGRFQVVSEHQPAGDQPAAIDELERRIKAGEKDVVLLGATGTGKSATTAWLIERLQRP 87
Query 62 TLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDDV 121
TLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDDV
Sbjct 88 TLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDDV 147
Query 122 ERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVELKVGEEVPRDGLLRLLVDV 181
ERLRHSATS+LLSRRDVVVVASVSCIYGLGTPQSYLDRSV+L+VG EV RD LLRLLVDV
Sbjct 148 ERLRHSATSSLLSRRDVVVVASVSCIYGLGTPQSYLDRSVQLEVGTEVDRDALLRLLVDV 207
Query 182 QYTRNDMSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGEVIRQVDS 241
QYTRND+SFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTG+V+R+VD+
Sbjct 208 QYTRNDLSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGDVVRKVDT 267
Query 242 LRIFPATHYVAGPERMAHAVSAIEEELAERLAELESQGKLLEAQRLRMRTNYDIEMMRQV 301
LRIFPATHYVAGP+RM AV IE+EL ERLAELE QGKLLEAQRLRMRT YD+EM+RQV
Sbjct 268 LRIFPATHYVAGPDRMERAVRDIEQELEERLAELERQGKLLEAQRLRMRTQYDLEMIRQV 327
Query 302 GFCSGIENYSRHIDGRGPGTPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKRN 361
GFCSGIENYSRHIDGR G+ PATLLDYFPEDFLLVIDESHVTVPQIGGMYEGD+SRKRN
Sbjct 328 GFCSGIENYSRHIDGRPAGSAPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDMSRKRN 387
Query 362 LVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQTGGEFVEQVIRPTGLVD 421
LVEYGFRLPSA DNRPLTWEEFADRIGQ VYLSATPGPYEL +TGGE VEQVIRPTGLVD
Sbjct 388 LVEYGFRLPSAVDNRPLTWEEFADRIGQVVYLSATPGPYELGRTGGEVVEQVIRPTGLVD 447
Query 422 PKVVVKPTKGQIDDLIGEIRTRADADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSEV 481
PKVVVKPTKGQIDDL+ EIR R + D+RVLVTTLTKKMAEDLTDYLL +G+RVRYLHSE+
Sbjct 448 PKVVVKPTKGQIDDLVHEIRLRTERDERVLVTTLTKKMAEDLTDYLLGLGVRVRYLHSEI 507
Query 482 DTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTIG 541
DTLRRVELLRQLRLG+YDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSS SLIQTIG
Sbjct 508 DTLRRVELLRQLRLGEYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSTSLIQTIG 567
Query 542 RAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNEANGIDPQPLRKKIADILDQV 601
RAARNVSGEVHMYADKITDSM+ AI+ETERRRAKQIAYNE GIDP+PLRKKIADILDQV
Sbjct 568 RAARNVSGEVHMYADKITDSMQFAIEETERRRAKQIAYNEKMGIDPKPLRKKIADILDQV 627
Query 602 YREADDTAVVEVGGSGRNASRGRRAQGEPGRAVSAGVFEGRDTSAMPRAELADLIKDLTA 661
YREAD+ VEVGGSGRNASRGRRAQGEPGRAVSAGV EGRD +MPRAELADL+ +LTA
Sbjct 628 YREADE---VEVGGSGRNASRGRRAQGEPGRAVSAGVIEGRDVKSMPRAELADLVTELTA 684
Query 662 QMMAAARDLQFELAARFRDEIADLKRELRGMDAAGL 697
QMM AAR+LQFELA R RDEIADLK+ELRGMDAAGL
Sbjct 685 QMMNAARELQFELAGRLRDEIADLKKELRGMDAAGL 720
>gi|326382689|ref|ZP_08204380.1| excinuclease ABC subunit B [Gordonia neofelifaecis NRRL B-59395]
gi|326198808|gb|EGD55991.1| excinuclease ABC subunit B [Gordonia neofelifaecis NRRL B-59395]
Length=717
Score = 1232 bits (3188), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 599/697 (86%), Positives = 649/697 (94%), Gaps = 2/697 (0%)
Query 2 RAGGHFEVVSPHAPAGDQPAAIDELERRINAGERDVVLLGATGTGKSATTAWLIERLQRP 61
R FEVVS + PAGDQP AI +LERR+N GERD+VLLGATGTGKSATTAWLIE++QRP
Sbjct 23 RKDSRFEVVSEYEPAGDQPTAIADLERRLNTGERDIVLLGATGTGKSATTAWLIEKVQRP 82
Query 62 TLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDDV 121
TLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDDV
Sbjct 83 TLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDDV 142
Query 122 ERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVELKVGEEVPRDGLLRLLVDV 181
ERLRH+ATS+LLSRRDVVVVASVSCIYGLGTPQSYLDRSVEL VG+ + RD LLRLLVDV
Sbjct 143 ERLRHAATSSLLSRRDVVVVASVSCIYGLGTPQSYLDRSVELSVGQTIDRDALLRLLVDV 202
Query 182 QYTRNDMSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGEVIRQVDS 241
QYTRND+SFTRG FRVRGDTVEIIPSYEELAVRIEFFGDE+++LYYLHPLTG+V+R+VDS
Sbjct 203 QYTRNDVSFTRGGFRVRGDTVEIIPSYEELAVRIEFFGDEVDSLYYLHPLTGDVVRKVDS 262
Query 242 LRIFPATHYVAGPERMAHAVSAIEEELAERLAELESQGKLLEAQRLRMRTNYDIEMMRQV 301
LRIFPATHYVAGPERMA A+ +IE+EL ERLA+LE++GKLLEAQRLRMRT YD+EMMRQV
Sbjct 263 LRIFPATHYVAGPERMAVAMESIEKELEERLADLEAKGKLLEAQRLRMRTTYDLEMMRQV 322
Query 302 GFCSGIENYSRHIDGRGPGTPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKRN 361
GFCSGIENYSRHIDGRGPGT PATLLDYFP+DFLLVIDESHVTVPQIG MYEGD+SRKRN
Sbjct 323 GFCSGIENYSRHIDGRGPGTAPATLLDYFPDDFLLVIDESHVTVPQIGAMYEGDMSRKRN 382
Query 362 LVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQTGGEFVEQVIRPTGLVD 421
LVEYGFRLPSA DNRPLTW+EF DR+GQTVYLSATPG YEL Q+GGEFVEQVIRPTGL+D
Sbjct 383 LVEYGFRLPSAVDNRPLTWDEFVDRVGQTVYLSATPGAYELGQSGGEFVEQVIRPTGLLD 442
Query 422 PKVVVKPTKGQIDDLIGEIRTRADADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSEV 481
P++VVKPTKGQIDDL+ EIR R + D+R+LVTTLTKKMAEDLTDYLLE+GIRVRYLHSEV
Sbjct 443 PQIVVKPTKGQIDDLVHEIRERTERDERILVTTLTKKMAEDLTDYLLELGIRVRYLHSEV 502
Query 482 DTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTIG 541
DTLRRVELLRQLR G+YDVLVGINLLREGLDLPEVSLVAILDADKEGFLRS+ SLIQTIG
Sbjct 503 DTLRRVELLRQLRSGEYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSTTSLIQTIG 562
Query 542 RAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNEANGIDPQPLRKKIADILDQV 601
RAARNVSGEVHMYADKITDSM AI+ET+RRRAKQIAYNE G+DPQPLRKKIADILDQV
Sbjct 563 RAARNVSGEVHMYADKITDSMANAIEETDRRRAKQIAYNEEKGVDPQPLRKKIADILDQV 622
Query 602 YREADDTAVVEVGGSGRNASRGRRAQGEPGRAVSAGVFEGRDTSAMPRAELADLIKDLTA 661
Y EADD+ VE+GGSGRNASRGRRAQGE + S+GV E RDTS MPRAELADL++ LT
Sbjct 623 YAEADDS--VEIGGSGRNASRGRRAQGEVSKVASSGVIENRDTSGMPRAELADLVQQLTD 680
Query 662 QMMAAARDLQFELAARFRDEIADLKRELRGMDAAGLK 698
QMM AARDLQFELAAR RDEIADLK+ELRGMDAAG+K
Sbjct 681 QMMNAARDLQFELAARLRDEIADLKKELRGMDAAGIK 717
>gi|262202763|ref|YP_003273971.1| excinuclease ABC subunit B [Gordonia bronchialis DSM 43247]
gi|262086110|gb|ACY22078.1| excinuclease ABC, B subunit [Gordonia bronchialis DSM 43247]
Length=718
Score = 1231 bits (3185), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 605/698 (87%), Positives = 645/698 (93%), Gaps = 1/698 (0%)
Query 1 VRAGGHFEVVSPHAPAGDQPAAIDELERRINAGERDVVLLGATGTGKSATTAWLIERLQR 60
VR GG FEVVS + PAGDQP AID+LERRI GE+D+VLLGATGTGKSATTAWLIER+QR
Sbjct 22 VRTGGKFEVVSEYEPAGDQPEAIDDLERRIRGGEKDIVLLGATGTGKSATTAWLIERVQR 81
Query 61 PTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD 120
PTLVMAPNKTLAAQLANELREMLP+NAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD
Sbjct 82 PTLVMAPNKTLAAQLANELREMLPNNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD 141
Query 121 VERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVELKVGEEVPRDGLLRLLVD 180
VERLRHSATS+LLSRRDVVVVASVSCIYGLGTPQSYLDRSVE++VG + RD LLRLLVD
Sbjct 142 VERLRHSATSSLLSRRDVVVVASVSCIYGLGTPQSYLDRSVEVEVGANIDRDALLRLLVD 201
Query 181 VQYTRNDMSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGEVIRQVD 240
VQYTRND SFTRG FRVRGDTVEIIPSYEELAVRIEFFGDE+EALYYLHPLTG+V+RQVD
Sbjct 202 VQYTRNDQSFTRGGFRVRGDTVEIIPSYEELAVRIEFFGDEVEALYYLHPLTGDVVRQVD 261
Query 241 SLRIFPATHYVAGPERMAHAVSAIEEELAERLAELESQGKLLEAQRLRMRTNYDIEMMRQ 300
SLRIFPATHYVAGPERM A+++IE EL ERLA+LE +GKLLEAQRLRMRT YD+EMMRQ
Sbjct 262 SLRIFPATHYVAGPERMERAMTSIEAELEERLADLEGKGKLLEAQRLRMRTTYDLEMMRQ 321
Query 301 VGFCSGIENYSRHIDGRGPGTPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKR 360
VGFCSGIENYSRHIDGR G+ PATL+DYFP+DFLLVIDESHVTVPQIGGMYEGD+SRKR
Sbjct 322 VGFCSGIENYSRHIDGRAAGSAPATLIDYFPDDFLLVIDESHVTVPQIGGMYEGDMSRKR 381
Query 361 NLVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQTGGEFVEQVIRPTGLV 420
NLVEYGFRLPSA DNRPLTW+EF DRIGQTVYLSATPGPYEL Q GEFVEQVIRPTGLV
Sbjct 382 NLVEYGFRLPSAVDNRPLTWDEFVDRIGQTVYLSATPGPYELGQANGEFVEQVIRPTGLV 441
Query 421 DPKVVVKPTKGQIDDLIGEIRTRADADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSE 480
DP+VVVKPTKGQIDDL+ EIR R + D+RVLVTTLTKKMAEDLTDYLLE+GIRVRYLHSE
Sbjct 442 DPQVVVKPTKGQIDDLVHEIRERTERDERVLVTTLTKKMAEDLTDYLLELGIRVRYLHSE 501
Query 481 VDTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTI 540
VDTLRRVELLRQLR GDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRS+ SLIQTI
Sbjct 502 VDTLRRVELLRQLRSGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSTTSLIQTI 561
Query 541 GRAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNEANGIDPQPLRKKIADILDQ 600
GRAARNVSGEVHMYAD ITDSMR AI+ETERRR KQ+AYN +GIDP+PLRKKIADILDQ
Sbjct 562 GRAARNVSGEVHMYADTITDSMRNAIEETERRREKQVAYNTEHGIDPKPLRKKIADILDQ 621
Query 601 VYREADDTAVVEVGGSGRNASRGRRAQGEPGRAVSAGVFEGRDTSAMPRAELADLIKDLT 660
VYREADD V+VGGSGRNASRGRRAQGE +A SAGV E RD S+MPRAELADL+ LT
Sbjct 622 VYREADDDT-VKVGGSGRNASRGRRAQGEVSKAGSAGVIEKRDVSSMPRAELADLVAQLT 680
Query 661 AQMMAAARDLQFELAARFRDEIADLKRELRGMDAAGLK 698
QMM AARDLQFELA R RDEIADLK+ELRGMDAAG+K
Sbjct 681 DQMMNAARDLQFELAGRLRDEIADLKKELRGMDAAGIK 718
>gi|325674226|ref|ZP_08153915.1| excision endonuclease subunit UvrB [Rhodococcus equi ATCC 33707]
gi|325554906|gb|EGD24579.1| excision endonuclease subunit UvrB [Rhodococcus equi ATCC 33707]
Length=718
Score = 1226 bits (3171), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 601/697 (87%), Positives = 649/697 (94%), Gaps = 1/697 (0%)
Query 2 RAGGHFEVVSPHAPAGDQPAAIDELERRINAGERDVVLLGATGTGKSATTAWLIERLQRP 61
R+ F+VVS + PAGDQP AIDELERR+ GE+DVVLLGATGTGKSATTAWLIER+QRP
Sbjct 23 RSDARFQVVSEYEPAGDQPQAIDELERRLREGEKDVVLLGATGTGKSATTAWLIERVQRP 82
Query 62 TLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDDV 121
TLVMAPNKTLAAQLANELREMLP+NAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDDV
Sbjct 83 TLVMAPNKTLAAQLANELREMLPNNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDDV 142
Query 122 ERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVELKVGEEVPRDGLLRLLVDV 181
ERLRHSATS+LLSRRDVVVVASVSCIYGLGTPQSYLDRS++L+VG EV RD LLRLLVDV
Sbjct 143 ERLRHSATSSLLSRRDVVVVASVSCIYGLGTPQSYLDRSIQLEVGVEVDRDALLRLLVDV 202
Query 182 QYTRNDMSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGEVIRQVDS 241
QY RNDM+FTRGSFRVRGDTVEIIPSYEELAVRIEFFGDE+EALYYLHPLTG+V+RQVD+
Sbjct 203 QYNRNDMAFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEVEALYYLHPLTGDVVRQVDT 262
Query 242 LRIFPATHYVAGPERMAHAVSAIEEELAERLAELESQGKLLEAQRLRMRTNYDIEMMRQV 301
+RIFPATHYVAGPERM AV IE EL ERLA+LE++GKLLEAQRLRMRT YD+EM++QV
Sbjct 263 VRIFPATHYVAGPERMERAVQDIEAELEERLADLENRGKLLEAQRLRMRTQYDLEMIKQV 322
Query 302 GFCSGIENYSRHIDGRGPGTPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKRN 361
GFCSGIENYSRHIDGR G+ PATL+DYFPEDFLLVIDESHVTVPQIG MYEGD+SRKRN
Sbjct 323 GFCSGIENYSRHIDGRPAGSAPATLIDYFPEDFLLVIDESHVTVPQIGAMYEGDMSRKRN 382
Query 362 LVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQTGGEFVEQVIRPTGLVD 421
LVE+GFRLPSA DNRPLTWEEFA RIGQTVYLSATPG YEL Q GGEFVEQVIRPTGLVD
Sbjct 383 LVEFGFRLPSATDNRPLTWEEFAGRIGQTVYLSATPGAYELGQAGGEFVEQVIRPTGLVD 442
Query 422 PKVVVKPTKGQIDDLIGEIRTRADADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSEV 481
P+VVVKPTKGQIDDL+ EIR R++ D+RVLVTTLTKKMAEDLTDYLLE+GIRVRYLHS++
Sbjct 443 PEVVVKPTKGQIDDLVHEIRERSERDERVLVTTLTKKMAEDLTDYLLELGIRVRYLHSDI 502
Query 482 DTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTIG 541
DTLRRVELLRQLRLG+YDVLVGINLLREGLDLPEVSLVAILDADKEGFLRS+ SLIQTIG
Sbjct 503 DTLRRVELLRQLRLGEYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSTTSLIQTIG 562
Query 542 RAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNEANGIDPQPLRKKIADILDQV 601
RAARNVSG+VHMYADKITDSM+ AI+ETERRR KQIAYN G+DPQPLRKKIADILDQV
Sbjct 563 RAARNVSGQVHMYADKITDSMQRAIEETERRREKQIAYNLEKGVDPQPLRKKIADILDQV 622
Query 602 YREADDTAVVEVGGSGRNASRGRRAQGEPGRAVSAGVFEGRDTSAMPRAELADLIKDLTA 661
Y EA+DT V VGGSGRNASRGRRAQGE GRAVSAG++EGRD +MPRAELADL+K+LT
Sbjct 623 YEEAEDTE-VGVGGSGRNASRGRRAQGEAGRAVSAGIYEGRDVKSMPRAELADLVKELTD 681
Query 662 QMMAAARDLQFELAARFRDEIADLKRELRGMDAAGLK 698
QMM AARDLQFELA R RDEIADLK+ELRGMDAAGLK
Sbjct 682 QMMNAARDLQFELAGRLRDEIADLKKELRGMDAAGLK 718
>gi|312139895|ref|YP_004007231.1| excinuclease ABC subunit b uvrb [Rhodococcus equi 103S]
gi|311889234|emb|CBH48548.1| excinuclease ABC subunit B UvrB [Rhodococcus equi 103S]
Length=764
Score = 1225 bits (3169), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 601/697 (87%), Positives = 649/697 (94%), Gaps = 1/697 (0%)
Query 2 RAGGHFEVVSPHAPAGDQPAAIDELERRINAGERDVVLLGATGTGKSATTAWLIERLQRP 61
R+ F+VVS + PAGDQP AIDELERR+ GE+DVVLLGATGTGKSATTAWLIER+QRP
Sbjct 69 RSDARFQVVSEYEPAGDQPQAIDELERRLREGEKDVVLLGATGTGKSATTAWLIERVQRP 128
Query 62 TLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDDV 121
TLVMAPNKTLAAQLANELREMLP+NAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDDV
Sbjct 129 TLVMAPNKTLAAQLANELREMLPNNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDDV 188
Query 122 ERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVELKVGEEVPRDGLLRLLVDV 181
ERLRHSATS+LLSRRDVVVVASVSCIYGLGTPQSYLDRS++L+VG EV RD LLRLLVDV
Sbjct 189 ERLRHSATSSLLSRRDVVVVASVSCIYGLGTPQSYLDRSIQLEVGVEVDRDALLRLLVDV 248
Query 182 QYTRNDMSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGEVIRQVDS 241
QY RNDM+FTRGSFRVRGDTVEIIPSYEELAVRIEFFGDE+EALYYLHPLTG+V+RQVD+
Sbjct 249 QYNRNDMAFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEVEALYYLHPLTGDVVRQVDT 308
Query 242 LRIFPATHYVAGPERMAHAVSAIEEELAERLAELESQGKLLEAQRLRMRTNYDIEMMRQV 301
+RIFPATHYVAGPERM AV IE EL ERLA+LE++GKLLEAQRLRMRT YD+EM++QV
Sbjct 309 VRIFPATHYVAGPERMERAVQDIEAELEERLADLENRGKLLEAQRLRMRTQYDLEMIKQV 368
Query 302 GFCSGIENYSRHIDGRGPGTPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKRN 361
GFCSGIENYSRHIDGR G+ PATL+DYFPEDFLLVIDESHVTVPQIG MYEGD+SRKRN
Sbjct 369 GFCSGIENYSRHIDGRPAGSAPATLIDYFPEDFLLVIDESHVTVPQIGAMYEGDMSRKRN 428
Query 362 LVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQTGGEFVEQVIRPTGLVD 421
LVE+GFRLPSA DNRPLTWEEFA RIGQTVYLSATPG YEL Q GGEFVEQVIRPTGLVD
Sbjct 429 LVEFGFRLPSATDNRPLTWEEFAGRIGQTVYLSATPGAYELGQAGGEFVEQVIRPTGLVD 488
Query 422 PKVVVKPTKGQIDDLIGEIRTRADADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSEV 481
P+VVVKPTKGQIDDL+ EIR R++ D+RVLVTTLTKKMAEDLTDYLLE+GIRVRYLHS++
Sbjct 489 PEVVVKPTKGQIDDLVHEIRERSERDERVLVTTLTKKMAEDLTDYLLELGIRVRYLHSDI 548
Query 482 DTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTIG 541
DTLRRVELLRQLRLG+YDVLVGINLLREGLDLPEVSLVAILDADKEGFLRS+ SLIQTIG
Sbjct 549 DTLRRVELLRQLRLGEYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSTTSLIQTIG 608
Query 542 RAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNEANGIDPQPLRKKIADILDQV 601
RAARNVSG+VHMYADKITDSM+ AI+ETERRR KQIAYN G+DPQPLRKKIADILDQV
Sbjct 609 RAARNVSGQVHMYADKITDSMQRAIEETERRREKQIAYNLEKGVDPQPLRKKIADILDQV 668
Query 602 YREADDTAVVEVGGSGRNASRGRRAQGEPGRAVSAGVFEGRDTSAMPRAELADLIKDLTA 661
Y EA+DT V VGGSGRNASRGRRAQGE GRAVSAG++EGRD +MPRAELADL+K+LT
Sbjct 669 YEEAEDTE-VGVGGSGRNASRGRRAQGEAGRAVSAGIYEGRDVKSMPRAELADLVKELTD 727
Query 662 QMMAAARDLQFELAARFRDEIADLKRELRGMDAAGLK 698
QMM AARDLQFELA R RDEIADLK+ELRGMDAAGLK
Sbjct 728 QMMNAARDLQFELAGRLRDEIADLKKELRGMDAAGLK 764
>gi|229492754|ref|ZP_04386555.1| excinuclease ABC subunit B [Rhodococcus erythropolis SK121]
gi|229320413|gb|EEN86233.1| excinuclease ABC subunit B [Rhodococcus erythropolis SK121]
Length=720
Score = 1221 bits (3160), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 603/698 (87%), Positives = 653/698 (94%), Gaps = 1/698 (0%)
Query 2 RAGGHFEVVSPHAPAGDQPAAIDELERRINAGERDVVLLGATGTGKSATTAWLIERLQRP 61
R+ FEVVSP+ PAGDQPAAI ELE+RIN GE+DVVLLGATGTGKSATTAWLIE+LQRP
Sbjct 23 RSDARFEVVSPYEPAGDQPAAITELEKRINEGEKDVVLLGATGTGKSATTAWLIEKLQRP 82
Query 62 TLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDDV 121
LVMAPNKTLAAQLANELREMLP+NAVEYFVSYYDYYQPEAYIAQTDTYIEKDSS+NDDV
Sbjct 83 ALVMAPNKTLAAQLANELREMLPNNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSVNDDV 142
Query 122 ERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVELKVGEEVPRDGLLRLLVDV 181
ERLRHSATS+LLSRRDVVVVASVSCIYGLGTPQSYLDRS++L VG EVPRD LRLLVDV
Sbjct 143 ERLRHSATSSLLSRRDVVVVASVSCIYGLGTPQSYLDRSIQLDVGVEVPRDAFLRLLVDV 202
Query 182 QYTRNDMSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGEVIRQVDS 241
QY RNDM+FTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTG+++RQVD+
Sbjct 203 QYNRNDMAFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGDIVRQVDT 262
Query 242 LRIFPATHYVAGPERMAHAVSAIEEELAERLAELESQGKLLEAQRLRMRTNYDIEMMRQV 301
+RIFPATHYVAGPERM A IE EL ERLAELE +GKLLEAQRLRMRT YD+EM++QV
Sbjct 263 VRIFPATHYVAGPERMERAAKDIEAELEERLAELEGKGKLLEAQRLRMRTQYDLEMIKQV 322
Query 302 GFCSGIENYSRHIDGRGPGTPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKRN 361
GFCSGIENYSRHIDGRGPGT PATL+DYFPEDFLLVIDESHVTVPQIG MYEGD+SRKRN
Sbjct 323 GFCSGIENYSRHIDGRGPGTAPATLIDYFPEDFLLVIDESHVTVPQIGAMYEGDMSRKRN 382
Query 362 LVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQTGGEFVEQVIRPTGLVD 421
LVE+GFRLPSA DNRPLTWEEF+ RIGQTVYLSATPG YEL Q+GGEFVEQVIRPTGL+D
Sbjct 383 LVEFGFRLPSATDNRPLTWEEFSQRIGQTVYLSATPGKYELGQSGGEFVEQVIRPTGLID 442
Query 422 PKVVVKPTKGQIDDLIGEIRTRADADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSEV 481
P+V+VKPTKGQIDDL+ EIR RA+ D+RVLVTTLTKKM+EDLTDYLLE+GIRVRYLHS++
Sbjct 443 PEVIVKPTKGQIDDLVHEIRERAERDERVLVTTLTKKMSEDLTDYLLELGIRVRYLHSDI 502
Query 482 DTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTIG 541
DTLRRVELLRQLRLG+YDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSS SLIQTIG
Sbjct 503 DTLRRVELLRQLRLGEYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSTSLIQTIG 562
Query 542 RAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNEANGIDPQPLRKKIADILDQV 601
RAARNVSG+VHMYADKIT SM +AI+ETERRR KQ+AYNE G+DPQPLRKKIADILDQV
Sbjct 563 RAARNVSGQVHMYADKITASMAQAIEETERRREKQVAYNEKMGVDPQPLRKKIADILDQV 622
Query 602 YREADDTAV-VEVGGSGRNASRGRRAQGEPGRAVSAGVFEGRDTSAMPRAELADLIKDLT 660
Y EA+DTA V+VGGSGRNA+RGRRAQGE GRAVSAGV+EGRDT +MPRAELADL+K+LT
Sbjct 623 YEEAEDTAASVDVGGSGRNATRGRRAQGEAGRAVSAGVYEGRDTKSMPRAELADLVKELT 682
Query 661 AQMMAAARDLQFELAARFRDEIADLKRELRGMDAAGLK 698
QMM AARDLQFELA R RDEI+DLK+ELRGMDAAGLK
Sbjct 683 DQMMNAARDLQFELAGRLRDEISDLKKELRGMDAAGLK 720
>gi|226306795|ref|YP_002766755.1| UvrABC system protein B [Rhodococcus erythropolis PR4]
gi|226185912|dbj|BAH34016.1| UvrABC system protein B [Rhodococcus erythropolis PR4]
Length=720
Score = 1221 bits (3160), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 603/698 (87%), Positives = 653/698 (94%), Gaps = 1/698 (0%)
Query 2 RAGGHFEVVSPHAPAGDQPAAIDELERRINAGERDVVLLGATGTGKSATTAWLIERLQRP 61
R+ FEVVSP+ PAGDQPAAI ELE+RIN GE+DVVLLGATGTGKSATTAWLIE+LQRP
Sbjct 23 RSDARFEVVSPYEPAGDQPAAIAELEKRINEGEKDVVLLGATGTGKSATTAWLIEKLQRP 82
Query 62 TLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDDV 121
LVMAPNKTLAAQLANELREMLP+NAVEYFVSYYDYYQPEAYIAQTDTYIEKDSS+NDDV
Sbjct 83 ALVMAPNKTLAAQLANELREMLPNNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSVNDDV 142
Query 122 ERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVELKVGEEVPRDGLLRLLVDV 181
ERLRHSATS+LLSRRDVVVVASVSCIYGLGTPQSYLDRS++L VG EVPRD LRLLVDV
Sbjct 143 ERLRHSATSSLLSRRDVVVVASVSCIYGLGTPQSYLDRSIQLDVGVEVPRDAFLRLLVDV 202
Query 182 QYTRNDMSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGEVIRQVDS 241
QY RNDM+FTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTG+++RQVD+
Sbjct 203 QYNRNDMAFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGDIVRQVDT 262
Query 242 LRIFPATHYVAGPERMAHAVSAIEEELAERLAELESQGKLLEAQRLRMRTNYDIEMMRQV 301
+RIFPATHYVAGPERM A IE EL ERLAELE +GKLLEAQRLRMRT YD+EM++QV
Sbjct 263 VRIFPATHYVAGPERMERAAKDIEAELEERLAELEGKGKLLEAQRLRMRTQYDLEMIKQV 322
Query 302 GFCSGIENYSRHIDGRGPGTPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKRN 361
GFCSGIENYSRHIDGRGPGT PATL+DYFPEDFLLVIDESHVTVPQIG MYEGD+SRKRN
Sbjct 323 GFCSGIENYSRHIDGRGPGTAPATLIDYFPEDFLLVIDESHVTVPQIGAMYEGDMSRKRN 382
Query 362 LVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQTGGEFVEQVIRPTGLVD 421
LVE+GFRLPSA DNRPLTWEEF+ RIGQTVYLSATPG YEL Q+GGEFVEQVIRPTGL+D
Sbjct 383 LVEFGFRLPSATDNRPLTWEEFSKRIGQTVYLSATPGKYELGQSGGEFVEQVIRPTGLID 442
Query 422 PKVVVKPTKGQIDDLIGEIRTRADADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSEV 481
P+V+VKPTKGQIDDL+ EIR RA+ D+RVLVTTLTKKM+EDLTDYLLE+GIRVRYLHS++
Sbjct 443 PEVIVKPTKGQIDDLVHEIRERAERDERVLVTTLTKKMSEDLTDYLLELGIRVRYLHSDI 502
Query 482 DTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTIG 541
DTLRRVELLRQLRLG+YDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSS SLIQTIG
Sbjct 503 DTLRRVELLRQLRLGEYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSTSLIQTIG 562
Query 542 RAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNEANGIDPQPLRKKIADILDQV 601
RAARNVSG+VHMYADKIT SM +AI+ETERRR KQ+AYNE G+DPQPLRKKIADILDQV
Sbjct 563 RAARNVSGQVHMYADKITASMAQAIEETERRREKQVAYNEKMGVDPQPLRKKIADILDQV 622
Query 602 YREADDTAV-VEVGGSGRNASRGRRAQGEPGRAVSAGVFEGRDTSAMPRAELADLIKDLT 660
Y EA+DTA V+VGGSGRNA+RGRRAQGE GRAVSAGV+EGRDT +MPRAELADL+K+LT
Sbjct 623 YEEAEDTAASVDVGGSGRNATRGRRAQGEAGRAVSAGVYEGRDTKSMPRAELADLVKELT 682
Query 661 AQMMAAARDLQFELAARFRDEIADLKRELRGMDAAGLK 698
QMM AARDLQFELA R RDEI+DLK+ELRGMDAAGLK
Sbjct 683 DQMMNAARDLQFELAGRLRDEISDLKKELRGMDAAGLK 720
>gi|296140129|ref|YP_003647372.1| excinuclease ABC subunit B [Tsukamurella paurometabola DSM 20162]
gi|296028263|gb|ADG79033.1| excinuclease ABC, B subunit [Tsukamurella paurometabola DSM 20162]
Length=720
Score = 1212 bits (3136), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 594/698 (86%), Positives = 639/698 (92%), Gaps = 3/698 (0%)
Query 2 RAGGHFEVVSPHAPAGDQPAAIDELERRINAGERDVVLLGATGTGKSATTAWLIERLQRP 61
RA F+VVS + PAGDQP AI++L R+NAGERDVVLLGATGTGKSATTAWLIE++QRP
Sbjct 23 RASSEFQVVSEYEPAGDQPQAIEQLAGRLNAGERDVVLLGATGTGKSATTAWLIEKVQRP 82
Query 62 TLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDDV 121
TLVMAPNKTLAAQLANELR MLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDDV
Sbjct 83 TLVMAPNKTLAAQLANELRAMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDDV 142
Query 122 ERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVELKVGEEVPRDGLLRLLVDV 181
ERLRHSATS+LLSRRDVVVVASVSCIYGLGTPQSYLDRSV+L+VG EV RD LLRLLVDV
Sbjct 143 ERLRHSATSSLLSRRDVVVVASVSCIYGLGTPQSYLDRSVQLEVGMEVDRDALLRLLVDV 202
Query 182 QYTRNDMSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGEVIRQVDS 241
QYTRNDM+FTRGSFRVRGDTVEIIPSYEELAVRIEFFGDE+EALYYLHPLTG+V+RQV++
Sbjct 203 QYTRNDMAFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEVEALYYLHPLTGDVVRQVEN 262
Query 242 LRIFPATHYVAGPERMAHAVSAIEEELAERLAELESQGKLLEAQRLRMRTNYDIEMMRQV 301
LRIFPATHYVAGPERMA A+ IE EL ERLAE E QGKLLEAQRLRMRT YD+EMMRQV
Sbjct 263 LRIFPATHYVAGPERMARAIEGIESELEERLAEFERQGKLLEAQRLRMRTQYDVEMMRQV 322
Query 302 GFCSGIENYSRHIDGRGPGTPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKRN 361
GFCSGIENYSRHIDGR G+ PATLLDYFPEDFLLVIDESHVTVPQIG M+EGD SRKRN
Sbjct 323 GFCSGIENYSRHIDGRAAGSAPATLLDYFPEDFLLVIDESHVTVPQIGAMFEGDTSRKRN 382
Query 362 LVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQTGGEFVEQVIRPTGLVD 421
LV++GFRLPSA DNRPLTWEEF +R+GQTVYLSATPG YEL Q+GGEFVEQVIRPTGLVD
Sbjct 383 LVDFGFRLPSAVDNRPLTWEEFTERVGQTVYLSATPGQYELGQSGGEFVEQVIRPTGLVD 442
Query 422 PKVVVKPTKGQIDDLIGEIRTRADADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSEV 481
P+VV+KPTKGQIDDL+ EIR R + D+RVLVTTLTKKMAEDLTDYLLE GIRVRYLHS++
Sbjct 443 PQVVIKPTKGQIDDLMHEIRERTEKDERVLVTTLTKKMAEDLTDYLLEAGIRVRYLHSDI 502
Query 482 DTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTIG 541
DTLRRVELLRQLRLG+YDVLVGINLLREGLDLPEVSLVAILDADKEGFLRS+ SLIQTIG
Sbjct 503 DTLRRVELLRQLRLGEYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSTTSLIQTIG 562
Query 542 RAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNEANGIDPQPLRKKIADILDQV 601
RAARNVSGEVHMYADKITDSMR AIDET+RRR KQIAYN G+DPQPLRKKIADILDQV
Sbjct 563 RAARNVSGEVHMYADKITDSMRNAIDETDRRREKQIAYNTEMGVDPQPLRKKIADILDQV 622
Query 602 YREADDTAVVEVGGSGRNASRGRRAQGE--PGRAVSAGVFEGRDTSAMPRAELADLIKDL 659
Y EADDT +GG GRNA+RGRRAQGE +VSAG++EG D +MPRAELADLI +L
Sbjct 623 YTEADDTEAA-IGGPGRNATRGRRAQGELRSASSVSAGMYEGEDVKSMPRAELADLISEL 681
Query 660 TAQMMAAARDLQFELAARFRDEIADLKRELRGMDAAGL 697
T QMM AAR+LQFELA R RDEIADLK+ELRGMDAAGL
Sbjct 682 TDQMMNAARELQFELAGRIRDEIADLKKELRGMDAAGL 719
>gi|333919161|ref|YP_004492742.1| UvrABC system protein B [Amycolicicoccus subflavus DQS3-9A1]
gi|333481382|gb|AEF39942.1| UvrABC system protein B [Amycolicicoccus subflavus DQS3-9A1]
Length=722
Score = 1202 bits (3110), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 589/697 (85%), Positives = 651/697 (94%), Gaps = 1/697 (0%)
Query 2 RAGGHFEVVSPHAPAGDQPAAIDELERRINAGERDVVLLGATGTGKSATTAWLIERLQRP 61
R G F VVS + PAGDQPAAI++LERR+N GE+DVVLLGATGTGKSATTAWLIER+QRP
Sbjct 25 RTPGRFTVVSDYTPAGDQPAAIEDLERRLNKGEKDVVLLGATGTGKSATTAWLIERVQRP 84
Query 62 TLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDDV 121
TL+MAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDDV
Sbjct 85 TLLMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDDV 144
Query 122 ERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVELKVGEEVPRDGLLRLLVDV 181
ERLRH ATS+LLSRRDVVVV+SVSCIYGLGTPQSYLDRS+E++VG+EVPRD LLRLLVD+
Sbjct 145 ERLRHRATSSLLSRRDVVVVSSVSCIYGLGTPQSYLDRSIEIEVGQEVPRDRLLRLLVDI 204
Query 182 QYTRNDMSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGEVIRQVDS 241
QYTRNDM+F RG+FRVRGDT++IIP+YEELAVR+EFFGDE+++LYY+HPLTG+V+ QV S
Sbjct 205 QYTRNDMAFVRGAFRVRGDTLDIIPAYEELAVRVEFFGDEVDSLYYIHPLTGDVVEQVQS 264
Query 242 LRIFPATHYVAGPERMAHAVSAIEEELAERLAELESQGKLLEAQRLRMRTNYDIEMMRQV 301
LRIFPATHYVAGP+RM A+ IE EL +RLA+LE++GKLLEAQRLRMRT+YDIEMMRQV
Sbjct 265 LRIFPATHYVAGPDRMEKAIEGIERELEQRLADLENRGKLLEAQRLRMRTSYDIEMMRQV 324
Query 302 GFCSGIENYSRHIDGRGPGTPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKRN 361
GFCSGIENYSRHID RG GTPPATLLDYFP+DFLLVIDESHVTVPQIGGMYEGD+SRKRN
Sbjct 325 GFCSGIENYSRHIDARGSGTPPATLLDYFPDDFLLVIDESHVTVPQIGGMYEGDMSRKRN 384
Query 362 LVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQTGGEFVEQVIRPTGLVD 421
LV+YGFRLPSA DNRPLTWEEF+ RIGQTVYLSATPGPYEL +TGGEFVEQVIRPTGLVD
Sbjct 385 LVDYGFRLPSALDNRPLTWEEFSSRIGQTVYLSATPGPYELGRTGGEFVEQVIRPTGLVD 444
Query 422 PKVVVKPTKGQIDDLIGEIRTRADADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSEV 481
P V+VKPTKGQIDDL+ E+R+R + D+R+LVTTLTKKMAEDLTDYLLE+GI+VRYLHS++
Sbjct 445 PHVIVKPTKGQIDDLVHEVRSRTERDERILVTTLTKKMAEDLTDYLLELGIKVRYLHSDI 504
Query 482 DTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTIG 541
DTLRRVELLRQLRLG++DVLVGINLLREGLDLPEVSLVAILDADKEGFLRSS SLIQTIG
Sbjct 505 DTLRRVELLRQLRLGEFDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSTSLIQTIG 564
Query 542 RAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNEANGIDPQPLRKKIADILDQV 601
RAARNVSGEVHMYAD++TDSM+ AI+ETERRR KQIAYN GI+P PLRKKIADILDQV
Sbjct 565 RAARNVSGEVHMYADRMTDSMQRAIEETERRREKQIAYNTEMGIEPAPLRKKIADILDQV 624
Query 602 YREADDT-AVVEVGGSGRNASRGRRAQGEPGRAVSAGVFEGRDTSAMPRAELADLIKDLT 660
Y+EADDT V VGGSGRNASRGRRAQGE GRAVS GV++G+D AMPRAELADLI LT
Sbjct 625 YQEADDTDESVSVGGSGRNASRGRRAQGEAGRAVSPGVYDGQDVKAMPRAELADLIAQLT 684
Query 661 AQMMAAARDLQFELAARFRDEIADLKRELRGMDAAGL 697
QMMAAARDLQFELAAR RDEIADLK+ELRGMDAAG+
Sbjct 685 DQMMAAARDLQFELAARLRDEIADLKKELRGMDAAGM 721
>gi|331697648|ref|YP_004333887.1| UvrABC system protein B [Pseudonocardia dioxanivorans CB1190]
gi|326952337|gb|AEA26034.1| UvrABC system protein B [Pseudonocardia dioxanivorans CB1190]
Length=733
Score = 1201 bits (3106), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 602/700 (86%), Positives = 645/700 (93%), Gaps = 4/700 (0%)
Query 2 RAGGHFEVVSPHAPAGDQPAAIDELERRINAGERDVVLLGATGTGKSATTAWLIERLQRP 61
R GG FEVVS + PAGDQPAAIDELERR+ AGE+DVVLLGATGTGKSATTAWLIER+QRP
Sbjct 35 RTGGRFEVVSEYEPAGDQPAAIDELERRLRAGEQDVVLLGATGTGKSATTAWLIERVQRP 94
Query 62 TLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDDV 121
TLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSIN DV
Sbjct 95 TLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINSDV 154
Query 122 ERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVELKVGEEVPRDGLLRLLVDV 181
ERLRHSAT LLSRRDVVVVASVSCIYGLGTPQSYLDRSV+L VG EV RD LLR LVDV
Sbjct 155 ERLRHSATQNLLSRRDVVVVASVSCIYGLGTPQSYLDRSVQLDVGSEVERDALLRALVDV 214
Query 182 QYTRNDMSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGEVIRQVDS 241
QYTRNDM+F RG+FRVRGDTVEIIP+YEELA+RIEFFGDEIEALYYLHPLTG+VIRQVD+
Sbjct 215 QYTRNDMAFARGTFRVRGDTVEIIPAYEELAIRIEFFGDEIEALYYLHPLTGDVIRQVDT 274
Query 242 LRIFPATHYVAGPERMAHAVSAIEEELAERLAELESQGKLLEAQRLRMRTNYDIEMMRQV 301
+RIFPATHYVAGPERM AV IE EL ERLAELE QGK+LEAQRLRMRT YDIEM+RQV
Sbjct 275 VRIFPATHYVAGPERMERAVRDIEAELEERLAELERQGKMLEAQRLRMRTQYDIEMIRQV 334
Query 302 GFCSGIENYSRHIDGRGPGTPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKRN 361
GFCSGIENYSRHIDGR G+ PATLLDYFP+DFLLVIDESHVTVPQIGGMYEGD+SRKRN
Sbjct 335 GFCSGIENYSRHIDGRAAGSAPATLLDYFPDDFLLVIDESHVTVPQIGGMYEGDMSRKRN 394
Query 362 LVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQTGGEFVEQVIRPTGLVD 421
LVE+GFRLPSA DNRPLTWEEFADRIGQTVYLSATPG YELS+TGGEFVEQVIRPTGLVD
Sbjct 395 LVEFGFRLPSAVDNRPLTWEEFADRIGQTVYLSATPGAYELSRTGGEFVEQVIRPTGLVD 454
Query 422 PKVVVKPTKGQIDDLIGEIRTRADADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSEV 481
P+VVVKPTKGQIDDL+ EIR R + D+RVLVTTLTKKMAEDLTDYLLE+GIRVRYLHSEV
Sbjct 455 PEVVVKPTKGQIDDLVHEIRLRTERDERVLVTTLTKKMAEDLTDYLLELGIRVRYLHSEV 514
Query 482 DTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTIG 541
DTLRRVELLRQLR G+YDVLVGINLLREGLDLPEVSLVAILDADKEGFLRS SLIQTIG
Sbjct 515 DTLRRVELLRQLRTGEYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSGTSLIQTIG 574
Query 542 RAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNEANGIDPQPLRKKIADILDQV 601
RAARNVSG+VHMYAD +T+SM+ AIDET+RRRAKQIAYN GIDPQPLRKKIADILDQV
Sbjct 575 RAARNVSGQVHMYADTVTESMQHAIDETDRRRAKQIAYNTEKGIDPQPLRKKIADILDQV 634
Query 602 YREADDTAVVEVGGSGRNASRGRRAQGEPGRAV---SAGVFEGRDTSAMPRAELADLIKD 658
YREA+D V VGGSGRN SRG+RA GEPGRA S+G+ GRDT +MPRAELADLI+
Sbjct 635 YREAED-GEVPVGGSGRNQSRGKRAAGEPGRATASASSGIVAGRDTKSMPRAELADLIQQ 693
Query 659 LTAQMMAAARDLQFELAARFRDEIADLKRELRGMDAAGLK 698
++ QM+AAARDLQFELAAR RDEIADLK+E+RGMDAAG++
Sbjct 694 MSDQMLAAARDLQFELAARLRDEIADLKKEMRGMDAAGIR 733
>gi|325002615|ref|ZP_08123727.1| excinuclease ABC subunit B [Pseudonocardia sp. P1]
Length=742
Score = 1196 bits (3093), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 588/698 (85%), Positives = 637/698 (92%), Gaps = 2/698 (0%)
Query 2 RAGGHFEVVSPHAPAGDQPAAIDELERRINAGERDVVLLGATGTGKSATTAWLIERLQRP 61
R G F+VVS PAGDQP AI +L+RR+ A E+D+VL+GATGTGKSATTAWLIE+ QRP
Sbjct 44 RKDGRFQVVSDLQPAGDQPTAIADLDRRLRAAEQDIVLMGATGTGKSATTAWLIEQQQRP 103
Query 62 TLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDDV 121
TLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSS+NDDV
Sbjct 104 TLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSVNDDV 163
Query 122 ERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVELKVGEEVPRDGLLRLLVDV 181
ERLRHSAT LLSRRDVVVVASVSCIYGLGTPQSYLDRSV L VGEEV RD LLRLLVD+
Sbjct 164 ERLRHSATMNLLSRRDVVVVASVSCIYGLGTPQSYLDRSVALAVGEEVERDRLLRLLVDI 223
Query 182 QYTRNDMSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGEVIRQVDS 241
QYTRNDMSFTRG+FRVRGDTVEIIP+YEELA+RIEFFGDEIEALY+L+PLTG+ + QV
Sbjct 224 QYTRNDMSFTRGTFRVRGDTVEIIPAYEELALRIEFFGDEIEALYHLNPLTGDTVEQVGE 283
Query 242 LRIFPATHYVAGPERMAHAVSAIEEELAERLAELESQGKLLEAQRLRMRTNYDIEMMRQV 301
+RIFPATHYVAGP+RM AVS IE EL +RL +LE+QGKLLEAQRLRMRT YDIEM+RQV
Sbjct 284 IRIFPATHYVAGPDRMERAVSDIEAELEQRLEQLENQGKLLEAQRLRMRTQYDIEMIRQV 343
Query 302 GFCSGIENYSRHIDGRGPGTPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKRN 361
GFCSGIENYSRHIDGRG GT PATL+DYFPEDFLLVIDESHVTVPQIGGMYEGD+SRKRN
Sbjct 344 GFCSGIENYSRHIDGRGAGTAPATLIDYFPEDFLLVIDESHVTVPQIGGMYEGDMSRKRN 403
Query 362 LVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQTGGEFVEQVIRPTGLVD 421
LVEYGFRLPSA DNRPLTWEEFADRIGQTVYLSATPGPYEL++TGGEFVEQVIRPTGLVD
Sbjct 404 LVEYGFRLPSAVDNRPLTWEEFADRIGQTVYLSATPGPYELNRTGGEFVEQVIRPTGLVD 463
Query 422 PKVVVKPTKGQIDDLIGEIRTRADADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSEV 481
P+VVVKPTKGQIDDL+ EIR R + D+RVLVTTLTKKMAEDLTDYLLE+GI+VRYLHSEV
Sbjct 464 PEVVVKPTKGQIDDLVAEIRDRTERDERVLVTTLTKKMAEDLTDYLLELGIKVRYLHSEV 523
Query 482 DTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTIG 541
DTLRRVELLRQLR G+YDVLVGINLLREGLDLPEVSLVAILDADKEGFLRS SLIQTIG
Sbjct 524 DTLRRVELLRQLRSGEYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSGTSLIQTIG 583
Query 542 RAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNEANGIDPQPLRKKIADILDQV 601
RAARNVSG+VHMYAD+ITDSM+ AIDET+RRRAKQ+AYN GIDPQPLRK+IADILDQV
Sbjct 584 RAARNVSGQVHMYADRITDSMQYAIDETDRRRAKQVAYNTERGIDPQPLRKRIADILDQV 643
Query 602 YREADDTAVVEVGGSGRNASRGRRAQGEPGRAVSAGV--FEGRDTSAMPRAELADLIKDL 659
YREA+DT V VGGSGRNASRG+RA GE GRA SAG +DT+ MPRAELADLI+ +
Sbjct 644 YREAEDTESVPVGGSGRNASRGKRASGEAGRAPSAGSAGVPAKDTAGMPRAELADLIQQM 703
Query 660 TAQMMAAARDLQFELAARFRDEIADLKRELRGMDAAGL 697
QM+ AARDLQFELAAR RDEI DLK+ELRGMDAAG+
Sbjct 704 NDQMLTAARDLQFELAARLRDEIGDLKKELRGMDAAGV 741
>gi|302528101|ref|ZP_07280443.1| excinuclease ABC, B subunit [Streptomyces sp. AA4]
gi|302436996|gb|EFL08812.1| excinuclease ABC, B subunit [Streptomyces sp. AA4]
Length=727
Score = 1184 bits (3064), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 592/699 (85%), Positives = 643/699 (92%), Gaps = 4/699 (0%)
Query 2 RAGGHFEVVSPHAPAGDQPAAIDELERRINAGERDVVLLGATGTGKSATTAWLIERLQRP 61
RAGG FEVVS + PAGDQPAAIDELERRI AGE+DVVLLGATGTGKSATTAWLIER+QRP
Sbjct 31 RAGGRFEVVSEYQPAGDQPAAIDELERRIRAGEKDVVLLGATGTGKSATTAWLIERVQRP 90
Query 62 TLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDDV 121
TLVMAPNKTLAAQLANELRE+ PHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDDV
Sbjct 91 TLVMAPNKTLAAQLANELRELFPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDDV 150
Query 122 ERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVELKVGEEVPRDGLLRLLVDV 181
ERLRHSAT LLSRRDV+VVASVSCIYGLGTPQSYLDRS +L+VG V RD LLR LVDV
Sbjct 151 ERLRHSATMNLLSRRDVIVVASVSCIYGLGTPQSYLDRSTKLEVGATVERDVLLRALVDV 210
Query 182 QYTRNDMSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGEVIRQVDS 241
QY+RND++F RG+FRVRGDTVEIIP+YEELA+R+EFFGDEI+ LYYLHPLTG+++R+VD
Sbjct 211 QYSRNDIAFARGTFRVRGDTVEIIPAYEELAIRVEFFGDEIDKLYYLHPLTGDIVREVDE 270
Query 242 LRIFPATHYVAGPERMAHAVSAIEEELAERLAELESQGKLLEAQRLRMRTNYDIEMMRQV 301
+RIFPATHYVAGPERM A+ IE EL ERLAELE QGKLLEAQRLRMRT YDIEMMRQV
Sbjct 271 VRIFPATHYVAGPERMEKAIRGIEAELEERLAELEKQGKLLEAQRLRMRTAYDIEMMRQV 330
Query 302 GFCSGIENYSRHIDGRGPGTPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKRN 361
GFCSGIENYSRHIDGRGPG+ PATL+DYFPEDFLLVIDESH TVPQIGGMYEGD+SRKRN
Sbjct 331 GFCSGIENYSRHIDGRGPGSAPATLIDYFPEDFLLVIDESHQTVPQIGGMYEGDMSRKRN 390
Query 362 LVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQTGGEFVEQVIRPTGLVD 421
LV+YGFRLPSA DNRPLTWEEF+DRIGQTVYLSATPGPYE+ QTGGEFVEQVIRPTGLVD
Sbjct 391 LVDYGFRLPSAVDNRPLTWEEFSDRIGQTVYLSATPGPYEMGQTGGEFVEQVIRPTGLVD 450
Query 422 PKVVVKPTKGQIDDLIGEIRTRADADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSEV 481
PKVVVKPT+GQIDDL+ EIR RAD D+RVLVTTLTKKMAEDLTDYLLE+GIRVRYLHSEV
Sbjct 451 PKVVVKPTEGQIDDLVHEIRERADKDERVLVTTLTKKMAEDLTDYLLELGIRVRYLHSEV 510
Query 482 DTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTIG 541
DTLRRVELLRQLR GDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRS SLIQTIG
Sbjct 511 DTLRRVELLRQLRAGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSGTSLIQTIG 570
Query 542 RAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNEANGIDPQPLRKKIADILDQV 601
RAARNVSGEVHMYADKITDSM+ AIDET+RRRAKQ+AYNE G+DPQPLRKKIADILD+V
Sbjct 571 RAARNVSGEVHMYADKITDSMKYAIDETDRRRAKQVAYNEERGLDPQPLRKKIADILDRV 630
Query 602 YREADDT-AVVEVGGSGRNASRGRRA-QGEPGRAVSAGVFEGRDTSAMPRAELADLIKDL 659
Y EA+D+ V VGGSGRN+SRG++ QG+ R S+G+ ++ SAMPRAELADLI+ +
Sbjct 631 YTEAEDSDETVAVGGSGRNSSRGKKPEQGD--RVRSSGMLTDKNVSAMPRAELADLIQQM 688
Query 660 TAQMMAAARDLQFELAARFRDEIADLKRELRGMDAAGLK 698
T QMM AARDLQFELAAR RDE+ADLK+ELRGMDAAG+K
Sbjct 689 TDQMMQAARDLQFELAARLRDEVADLKKELRGMDAAGIK 727
>gi|340529541|gb|AEK44746.1| excinuclease ABC subunit B [Amycolatopsis mediterranei S699]
Length=718
Score = 1179 bits (3050), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 585/698 (84%), Positives = 639/698 (92%), Gaps = 3/698 (0%)
Query 2 RAGGHFEVVSPHAPAGDQPAAIDELERRINAGERDVVLLGATGTGKSATTAWLIERLQRP 61
R GG FEVVS + PAGDQPAAIDELERRI AGE+DVVLLGATGTGKSATTAWLIER+QRP
Sbjct 23 RTGGRFEVVSDYQPAGDQPAAIDELERRIKAGEKDVVLLGATGTGKSATTAWLIERVQRP 82
Query 62 TLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDDV 121
TLVMAPNKTLAAQLANELRE+ P+NAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDDV
Sbjct 83 TLVMAPNKTLAAQLANELRELFPNNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDDV 142
Query 122 ERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVELKVGEEVPRDGLLRLLVDV 181
ERLRHSAT LLSRRDV+VVASVSCIYGLGTPQSYLDRS +LK G ++ RD LR LVDV
Sbjct 143 ERLRHSATMNLLSRRDVIVVASVSCIYGLGTPQSYLDRSSKLKAGMQLDRDVFLRALVDV 202
Query 182 QYTRNDMSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGEVIRQVDS 241
QYTRND++F RG+FR RGDTVEIIP+YEELA+R+EFFGDEIE LYYLHPLTG+++++VD
Sbjct 203 QYTRNDIAFARGTFRARGDTVEIIPAYEELAIRVEFFGDEIEKLYYLHPLTGDIVKEVDE 262
Query 242 LRIFPATHYVAGPERMAHAVSAIEEELAERLAELESQGKLLEAQRLRMRTNYDIEMMRQV 301
+RIFPATHYVAGPERM A+ IE+EL ERLAELE QGKLLEAQRLRMRT YDIEMMRQV
Sbjct 263 VRIFPATHYVAGPERMEKAIQGIEKELEERLAELERQGKLLEAQRLRMRTAYDIEMMRQV 322
Query 302 GFCSGIENYSRHIDGRGPGTPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKRN 361
GFCSGIENYSRHIDGRGPGT PATL+DYFP+DFLLVIDESH TVPQIGGMYEGD+SRKRN
Sbjct 323 GFCSGIENYSRHIDGRGPGTAPATLIDYFPDDFLLVIDESHQTVPQIGGMYEGDMSRKRN 382
Query 362 LVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQTGGEFVEQVIRPTGLVD 421
LVEYGFRLPSA DNRPLTWEEF+DRIGQTVYLSATPGPYE+ Q GGEFVEQVIRPTGLVD
Sbjct 383 LVEYGFRLPSAVDNRPLTWEEFSDRIGQTVYLSATPGPYEMGQAGGEFVEQVIRPTGLVD 442
Query 422 PKVVVKPTKGQIDDLIGEIRTRADADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSEV 481
PKVVVKPT+GQIDDL+ EIR RA+ D+RVLVTTLTKKM+EDLTDYLLE+GIRVRYLHSEV
Sbjct 443 PKVVVKPTEGQIDDLVHEIRERAEKDERVLVTTLTKKMSEDLTDYLLELGIRVRYLHSEV 502
Query 482 DTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTIG 541
DTLRRVELLRQLR GD+DVLVGINLLREGLDLPEVSLVAILDADKEGFLRS SLIQTIG
Sbjct 503 DTLRRVELLRQLRAGDFDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSGTSLIQTIG 562
Query 542 RAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNEANGIDPQPLRKKIADILDQV 601
RAARNVSGEVHMYADKITDSMR AIDET+RRR KQ+AYNE G+DPQPLRKKIADILD+V
Sbjct 563 RAARNVSGEVHMYADKITDSMRHAIDETDRRREKQVAYNEERGVDPQPLRKKIADILDRV 622
Query 602 YREADDTAVVEVGGSGRNASRGRRA-QGEPGRAVSAGVFEGRDTSAMPRAELADLIKDLT 660
Y EA+DT V VGGSGRN+SRG++ QG+ R S+G+ ++ SAMPRA+LADLI+ +T
Sbjct 623 YSEAEDTEQVSVGGSGRNSSRGKKPEQGD--RVRSSGMLVDKNVSAMPRAQLADLIQQMT 680
Query 661 AQMMAAARDLQFELAARFRDEIADLKRELRGMDAAGLK 698
QMM AARDLQFELAAR RDEI+DLK+ELRGMDAAG+K
Sbjct 681 DQMMQAARDLQFELAARLRDEISDLKKELRGMDAAGIK 718
>gi|300787966|ref|YP_003768257.1| excinuclease ABC subunit B [Amycolatopsis mediterranei U32]
gi|299797480|gb|ADJ47855.1| excinuclease ABC subunit B [Amycolatopsis mediterranei U32]
Length=726
Score = 1179 bits (3049), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 585/698 (84%), Positives = 639/698 (92%), Gaps = 3/698 (0%)
Query 2 RAGGHFEVVSPHAPAGDQPAAIDELERRINAGERDVVLLGATGTGKSATTAWLIERLQRP 61
R GG FEVVS + PAGDQPAAIDELERRI AGE+DVVLLGATGTGKSATTAWLIER+QRP
Sbjct 31 RTGGRFEVVSDYQPAGDQPAAIDELERRIKAGEKDVVLLGATGTGKSATTAWLIERVQRP 90
Query 62 TLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDDV 121
TLVMAPNKTLAAQLANELRE+ P+NAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDDV
Sbjct 91 TLVMAPNKTLAAQLANELRELFPNNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDDV 150
Query 122 ERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVELKVGEEVPRDGLLRLLVDV 181
ERLRHSAT LLSRRDV+VVASVSCIYGLGTPQSYLDRS +LK G ++ RD LR LVDV
Sbjct 151 ERLRHSATMNLLSRRDVIVVASVSCIYGLGTPQSYLDRSSKLKAGMQLDRDVFLRALVDV 210
Query 182 QYTRNDMSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGEVIRQVDS 241
QYTRND++F RG+FR RGDTVEIIP+YEELA+R+EFFGDEIE LYYLHPLTG+++++VD
Sbjct 211 QYTRNDIAFARGTFRARGDTVEIIPAYEELAIRVEFFGDEIEKLYYLHPLTGDIVKEVDE 270
Query 242 LRIFPATHYVAGPERMAHAVSAIEEELAERLAELESQGKLLEAQRLRMRTNYDIEMMRQV 301
+RIFPATHYVAGPERM A+ IE+EL ERLAELE QGKLLEAQRLRMRT YDIEMMRQV
Sbjct 271 VRIFPATHYVAGPERMEKAIQGIEKELEERLAELERQGKLLEAQRLRMRTAYDIEMMRQV 330
Query 302 GFCSGIENYSRHIDGRGPGTPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKRN 361
GFCSGIENYSRHIDGRGPGT PATL+DYFP+DFLLVIDESH TVPQIGGMYEGD+SRKRN
Sbjct 331 GFCSGIENYSRHIDGRGPGTAPATLIDYFPDDFLLVIDESHQTVPQIGGMYEGDMSRKRN 390
Query 362 LVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQTGGEFVEQVIRPTGLVD 421
LVEYGFRLPSA DNRPLTWEEF+DRIGQTVYLSATPGPYE+ Q GGEFVEQVIRPTGLVD
Sbjct 391 LVEYGFRLPSAVDNRPLTWEEFSDRIGQTVYLSATPGPYEMGQAGGEFVEQVIRPTGLVD 450
Query 422 PKVVVKPTKGQIDDLIGEIRTRADADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSEV 481
PKVVVKPT+GQIDDL+ EIR RA+ D+RVLVTTLTKKM+EDLTDYLLE+GIRVRYLHSEV
Sbjct 451 PKVVVKPTEGQIDDLVHEIRERAEKDERVLVTTLTKKMSEDLTDYLLELGIRVRYLHSEV 510
Query 482 DTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTIG 541
DTLRRVELLRQLR GD+DVLVGINLLREGLDLPEVSLVAILDADKEGFLRS SLIQTIG
Sbjct 511 DTLRRVELLRQLRAGDFDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSGTSLIQTIG 570
Query 542 RAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNEANGIDPQPLRKKIADILDQV 601
RAARNVSGEVHMYADKITDSMR AIDET+RRR KQ+AYNE G+DPQPLRKKIADILD+V
Sbjct 571 RAARNVSGEVHMYADKITDSMRHAIDETDRRREKQVAYNEERGVDPQPLRKKIADILDRV 630
Query 602 YREADDTAVVEVGGSGRNASRGRRA-QGEPGRAVSAGVFEGRDTSAMPRAELADLIKDLT 660
Y EA+DT V VGGSGRN+SRG++ QG+ R S+G+ ++ SAMPRA+LADLI+ +T
Sbjct 631 YSEAEDTEQVSVGGSGRNSSRGKKPEQGD--RVRSSGMLVDKNVSAMPRAQLADLIQQMT 688
Query 661 AQMMAAARDLQFELAARFRDEIADLKRELRGMDAAGLK 698
QMM AARDLQFELAAR RDEI+DLK+ELRGMDAAG+K
Sbjct 689 DQMMQAARDLQFELAARLRDEISDLKKELRGMDAAGIK 726
>gi|257056574|ref|YP_003134406.1| excinuclease ABC subunit B [Saccharomonospora viridis DSM 43017]
gi|256586446|gb|ACU97579.1| Excinuclease ABC subunit B [Saccharomonospora viridis DSM 43017]
Length=719
Score = 1174 bits (3037), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 577/699 (83%), Positives = 632/699 (91%), Gaps = 4/699 (0%)
Query 2 RAGGHFEVVSPHAPAGDQPAAIDELERRINAGERDVVLLGATGTGKSATTAWLIERLQRP 61
R+ G F+VVS + PAGDQPAAIDELERRI AGE+ VVLLGATGTGKSATTAWLIERLQRP
Sbjct 23 RSDGRFKVVSDYEPAGDQPAAIDELERRIKAGEKHVVLLGATGTGKSATTAWLIERLQRP 82
Query 62 TLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDDV 121
TLVMA NKTLAAQLANELRE PHNAVEYFVSYYDYYQPEAY+ QTDTYIEKDSSINDDV
Sbjct 83 TLVMAHNKTLAAQLANELREFFPHNAVEYFVSYYDYYQPEAYVPQTDTYIEKDSSINDDV 142
Query 122 ERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVELKVGEEVPRDGLLRLLVDV 181
ERLRHSAT LLSRRDV+VV+SVSCIYGLGTPQSYLDRS L VGEEV RD LR LVDV
Sbjct 143 ERLRHSATMNLLSRRDVIVVSSVSCIYGLGTPQSYLDRSTRLAVGEEVDRDTFLRALVDV 202
Query 182 QYTRNDMSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGEVIRQVDS 241
QYTRND++F RG+FRVRGDTVEIIP+YEELA+R+EFFGDEI+ LYYLHPLTG+++R+VD
Sbjct 203 QYTRNDLAFERGTFRVRGDTVEIIPAYEELAIRVEFFGDEIDKLYYLHPLTGDIVREVDE 262
Query 242 LRIFPATHYVAGPERMAHAVSAIEEELAERLAELESQGKLLEAQRLRMRTNYDIEMMRQV 301
+RIFPATHYVA PERM A+ IE EL E++A+LE QGKLLEAQRLRMRT YDIEMMRQV
Sbjct 263 VRIFPATHYVASPERMEKAIRGIEAELEEQIAKLERQGKLLEAQRLRMRTTYDIEMMRQV 322
Query 302 GFCSGIENYSRHIDGRGPGTPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKRN 361
GFCSGIENYSRHIDGR PG+ PATLLDYFPEDFLLVIDESHVTVPQIGGMYEGD SRKR
Sbjct 323 GFCSGIENYSRHIDGREPGSAPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDASRKRT 382
Query 362 LVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQTGGEFVEQVIRPTGLVD 421
LVE+GFRLPSA DNRPLTWEEF+DRIGQTVYLSATPGPYE+SQTGGEFVEQVIRPTGLVD
Sbjct 383 LVEHGFRLPSALDNRPLTWEEFSDRIGQTVYLSATPGPYEMSQTGGEFVEQVIRPTGLVD 442
Query 422 PKVVVKPTKGQIDDLIGEIRTRADADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSEV 481
P+V+VKPT+GQIDDL+ EIR RA+ D+RVLVTTLTKKMAEDLTDYLLE+GIRVRYLHSE+
Sbjct 443 PEVIVKPTEGQIDDLVHEIRIRAEKDERVLVTTLTKKMAEDLTDYLLELGIRVRYLHSEI 502
Query 482 DTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTIG 541
DTLRRVELLRQLR GD+DVLVGINLLREGLDLPEVSLV+ILDADKEGFLRSS SLIQTIG
Sbjct 503 DTLRRVELLRQLRSGDFDVLVGINLLREGLDLPEVSLVSILDADKEGFLRSSTSLIQTIG 562
Query 542 RAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNEANGIDPQPLRKKIADILDQV 601
RAARNVSG+VHMYAD ITDSMR AIDET RRR KQIAYN+ +GIDP+PLRKKIADILD+V
Sbjct 563 RAARNVSGQVHMYADTITDSMRYAIDETNRRREKQIAYNKEHGIDPKPLRKKIADILDRV 622
Query 602 YREADDTAV-VEVGGSGRNASRGRRA-QGEPGRAVSAGVFEGRDTSAMPRAELADLIKDL 659
Y EA+D+ + +EVGGSGRN SRG+ QG+ R S+GV RD S MPRAELADLI+ L
Sbjct 623 YTEAEDSELGIEVGGSGRNVSRGKTPEQGD--RKRSSGVLVDRDVSNMPRAELADLIRQL 680
Query 660 TAQMMAAARDLQFELAARFRDEIADLKRELRGMDAAGLK 698
T QMM AARDLQFELAAR RDEI++LK+ELRGMD AG++
Sbjct 681 TDQMMQAARDLQFELAARLRDEISELKKELRGMDEAGVQ 719
>gi|256379520|ref|YP_003103180.1| excinuclease ABC subunit B [Actinosynnema mirum DSM 43827]
gi|255923823|gb|ACU39334.1| excinuclease ABC, B subunit [Actinosynnema mirum DSM 43827]
Length=723
Score = 1165 bits (3014), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 565/697 (82%), Positives = 628/697 (91%), Gaps = 2/697 (0%)
Query 2 RAGGHFEVVSPHAPAGDQPAAIDELERRINAGERDVVLLGATGTGKSATTAWLIERLQRP 61
R+ G F VVS P+GDQPAAI ELERR+ GERDVVLLGATGTGKSATTAWL+E++QRP
Sbjct 29 RSAGEFRVVSEFTPSGDQPAAIAELERRLRGGERDVVLLGATGTGKSATTAWLVEKVQRP 88
Query 62 TLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDDV 121
TLVMAPNKTLAAQLANELR++ P NAVEYFVSYYDYYQPEAYI Q+DTYIEKDSS+N+DV
Sbjct 89 TLVMAPNKTLAAQLANELRDLFPENAVEYFVSYYDYYQPEAYIPQSDTYIEKDSSVNEDV 148
Query 122 ERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVELKVGEEVPRDGLLRLLVDV 181
ERLRHSAT +LL+RRDV+VVASVSCIYGLGTPQ+YLDRS+ L+VG EV RD LLR LVDV
Sbjct 149 ERLRHSATMSLLTRRDVIVVASVSCIYGLGTPQAYLDRSIPLRVGGEVDRDVLLRALVDV 208
Query 182 QYTRNDMSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGEVIRQVDS 241
QY RND++F RG+FRVRGDTVEIIPSYEELA+R+EFFGDE++ LYYLHPLTG+V+++V
Sbjct 209 QYARNDIAFNRGTFRVRGDTVEIIPSYEELAIRVEFFGDEVDRLYYLHPLTGDVVKEVQE 268
Query 242 LRIFPATHYVAGPERMAHAVSAIEEELAERLAELESQGKLLEAQRLRMRTNYDIEMMRQV 301
LRIFPATHY AGPERM A+ IE EL +RLA+LE QGKLLEAQRLRMRT YDIEMMRQV
Sbjct 269 LRIFPATHYAAGPERMEIAIKGIEVELEQRLADLERQGKLLEAQRLRMRTTYDIEMMRQV 328
Query 302 GFCSGIENYSRHIDGRGPGTPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKRN 361
GFCSGIENYSRHIDGR G+ PATL+DYFP+DFLLVIDESHVTVPQIG MYEGD SRKRN
Sbjct 329 GFCSGIENYSRHIDGRDAGSAPATLIDYFPDDFLLVIDESHVTVPQIGAMYEGDASRKRN 388
Query 362 LVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQTGGEFVEQVIRPTGLVD 421
LV++GFRLPSA DNRPLTWEEFADR+GQT+YLSATPG YEL Q GGEFVEQVIRPTGLVD
Sbjct 389 LVDHGFRLPSALDNRPLTWEEFADRVGQTIYLSATPGNYELGQAGGEFVEQVIRPTGLVD 448
Query 422 PKVVVKPTKGQIDDLIGEIRTRADADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSEV 481
P+VVVKPT+GQIDDL+ EIR RA+ D+RVLVTTLTKKM+EDLTDYLLE+GIRVRYLHS++
Sbjct 449 PQVVVKPTEGQIDDLVHEIRARAERDERVLVTTLTKKMSEDLTDYLLELGIRVRYLHSDI 508
Query 482 DTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTIG 541
DTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRS+ SLIQTIG
Sbjct 509 DTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSTTSLIQTIG 568
Query 542 RAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNEANGIDPQPLRKKIADILDQV 601
RAARNVSGEVHMYAD++TDSMR AI+ET RRRAKQ+AYNE GIDPQPLRKKI DIL+QV
Sbjct 569 RAARNVSGEVHMYADRVTDSMRNAIEETNRRRAKQVAYNEERGIDPQPLRKKITDILEQV 628
Query 602 YREADDTAVVEVGGSGRNASRGRRAQGEPGRAVSAGVFEGRDTSAMPRAELADLIKDLTA 661
Y E +D V GGSGRNA+RG+RA GEPG+A S+GV GRD +M RAELADL++ LT
Sbjct 629 YAEVEDD--VAPGGSGRNATRGKRAAGEPGKAGSSGVLAGRDVGSMARAELADLVQQLTD 686
Query 662 QMMAAARDLQFELAARFRDEIADLKRELRGMDAAGLK 698
QMM AAR+LQFELA R RDEIADLK+ELRGMDAAGLK
Sbjct 687 QMMNAARELQFELAGRLRDEIADLKKELRGMDAAGLK 723
>gi|291009196|ref|ZP_06567169.1| excinuclease ABC subunit B [Saccharopolyspora erythraea NRRL
2338]
Length=717
Score = 1162 bits (3007), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 569/697 (82%), Positives = 623/697 (90%), Gaps = 2/697 (0%)
Query 2 RAGGHFEVVSPHAPAGDQPAAIDELERRINAGERDVVLLGATGTGKSATTAWLIERLQRP 61
R GG F +VS + PAGDQP AID+LERRIN+GE DVVLLGATGTGKSATTAWLIER+QRP
Sbjct 23 RTGGRFRMVSDYQPAGDQPQAIDDLERRINSGETDVVLLGATGTGKSATTAWLIERVQRP 82
Query 62 TLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDDV 121
TLV+ PNKTLAAQ ANELR P NAVEYFVSYYDYYQPEAY+ QTDTYIEKDSSIN+DV
Sbjct 83 TLVLEPNKTLAAQFANELRGFFPDNAVEYFVSYYDYYQPEAYVPQTDTYIEKDSSINEDV 142
Query 122 ERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVELKVGEEVPRDGLLRLLVDV 181
ERLRHSATS LLSRRD VVV+SVSCIYGLGTPQSYLDRS++L+VG E RD LLR LVDV
Sbjct 143 ERLRHSATSNLLSRRDCVVVSSVSCIYGLGTPQSYLDRSIQLQVGGETDRDVLLRALVDV 202
Query 182 QYTRNDMSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGEVIRQVDS 241
QYTRND++F RG+FRVRGDTVE+IP+YEELAVRIE FGDEI+ LYYLHPLTGEV+R+VD
Sbjct 203 QYTRNDIAFARGTFRVRGDTVEVIPAYEELAVRIEMFGDEIDRLYYLHPLTGEVVREVDE 262
Query 242 LRIFPATHYVAGPERMAHAVSAIEEELAERLAELESQGKLLEAQRLRMRTNYDIEMMRQV 301
LRIFPATHYVAGPERM A+ +IE EL E+LA+LE Q KLLEAQRLRMRT YDIEMMRQV
Sbjct 263 LRIFPATHYVAGPERMEKAIRSIEAELDEQLAKLEKQNKLLEAQRLRMRTQYDIEMMRQV 322
Query 302 GFCSGIENYSRHIDGRGPGTPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKRN 361
GFCSGIENYSRH+D R G+ PATLLDYFP+DFLL+IDESHVTVPQ+GGMYEGD SRKR
Sbjct 323 GFCSGIENYSRHVDDRPAGSAPATLLDYFPDDFLLIIDESHVTVPQVGGMYEGDASRKRT 382
Query 362 LVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQTGGEFVEQVIRPTGLVD 421
LVE+GFRLPSA DNRPLTWEEFADRIGQTVYLSATPGPYE+ Q GGEFVEQVIRPTGLVD
Sbjct 383 LVEHGFRLPSALDNRPLTWEEFADRIGQTVYLSATPGPYEMGQAGGEFVEQVIRPTGLVD 442
Query 422 PKVVVKPTKGQIDDLIGEIRTRADADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSEV 481
P+VVVKPT+GQIDDL+ EIR RA+ D+RVLVTTLTKKMAEDLTDY LE+GIRVRYLHSEV
Sbjct 443 PEVVVKPTEGQIDDLVHEIRERAERDERVLVTTLTKKMAEDLTDYFLELGIRVRYLHSEV 502
Query 482 DTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTIG 541
DTLRRVELLRQLRLG+YDVLVGINLLREGLDLPEVSLV+ILDADKEGFLRS SLIQTIG
Sbjct 503 DTLRRVELLRQLRLGEYDVLVGINLLREGLDLPEVSLVSILDADKEGFLRSGTSLIQTIG 562
Query 542 RAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNEANGIDPQPLRKKIADILDQV 601
RAARNVSG+VHMYAD+ITDSMR AIDET RRR KQIAYNE GIDPQPLRKKIADILD+V
Sbjct 563 RAARNVSGQVHMYADRITDSMRHAIDETNRRREKQIAYNEEKGIDPQPLRKKIADILDRV 622
Query 602 YREADDTAVVEVGGSGRNASRGRRAQGEPGRAVSAGVFEGRDTSAMPRAELADLIKDLTA 661
Y E++DT V VGGSGRN SRG++ GE SAG+ E RD +MPRAELADL++ L
Sbjct 623 YSESEDTEEVAVGGSGRNVSRGKKPSGEA--VGSAGLLEDRDIKSMPRAELADLVQQLND 680
Query 662 QMMAAARDLQFELAARFRDEIADLKRELRGMDAAGLK 698
QMM+AARDLQFELAAR RDEI DLK+ELRGMDAAG++
Sbjct 681 QMMSAARDLQFELAARLRDEIQDLKKELRGMDAAGIE 717
>gi|289753720|ref|ZP_06513098.1| excinuclease ABC (subunit B-helicase) uvrB [Mycobacterium tuberculosis
EAS054]
gi|289694307|gb|EFD61736.1| excinuclease ABC (subunit B-helicase) uvrB [Mycobacterium tuberculosis
EAS054]
Length=654
Score = 1162 bits (3007), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 572/576 (99%), Positives = 574/576 (99%), Gaps = 0/576 (0%)
Query 1 VRAGGHFEVVSPHAPAGDQPAAIDELERRINAGERDVVLLGATGTGKSATTAWLIERLQR 60
+RAGGHFEVVSPHAPAGDQPAAIDELERRINAGERDVVLLGATGTGKSATTAWLIERLQR
Sbjct 1 MRAGGHFEVVSPHAPAGDQPAAIDELERRINAGERDVVLLGATGTGKSATTAWLIERLQR 60
Query 61 PTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD 120
PTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD
Sbjct 61 PTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD 120
Query 121 VERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVELKVGEEVPRDGLLRLLVD 180
VERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVELKVGEEVPRDGLLRLLVD
Sbjct 121 VERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVELKVGEEVPRDGLLRLLVD 180
Query 181 VQYTRNDMSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGEVIRQVD 240
VQYTRNDMSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGEVIRQVD
Sbjct 181 VQYTRNDMSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGEVIRQVD 240
Query 241 SLRIFPATHYVAGPERMAHAVSAIEEELAERLAELESQGKLLEAQRLRMRTNYDIEMMRQ 300
SLRIFPATHYVAGPERMAHAVSAIEEELAERLAELESQGKLLEAQRLRMRTNYDIEMMRQ
Sbjct 241 SLRIFPATHYVAGPERMAHAVSAIEEELAERLAELESQGKLLEAQRLRMRTNYDIEMMRQ 300
Query 301 VGFCSGIENYSRHIDGRGPGTPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKR 360
VGFCSGIENYSRHIDGRGPGTPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKR
Sbjct 301 VGFCSGIENYSRHIDGRGPGTPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKR 360
Query 361 NLVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQTGGEFVEQVIRPTGLV 420
NLVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQTGGEFVEQVIRPTGLV
Sbjct 361 NLVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQTGGEFVEQVIRPTGLV 420
Query 421 DPKVVVKPTKGQIDDLIGEIRTRADADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSE 480
DPKVVVKPTKGQIDDLIGEIRTRADADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSE
Sbjct 421 DPKVVVKPTKGQIDDLIGEIRTRADADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSE 480
Query 481 VDTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTI 540
VDTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTI
Sbjct 481 VDTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTI 540
Query 541 GRAARNVSGEVHMYADKITDSMREAIDETERRRAKQ 576
GRAARNVSGEVHMYADKITDSMREAIDETERRR +
Sbjct 541 GRAARNVSGEVHMYADKITDSMREAIDETERRRPSR 576
>gi|134101920|ref|YP_001107581.1| excinuclease ABC subunit B [Saccharopolyspora erythraea NRRL
2338]
gi|133914543|emb|CAM04656.1| excinuclease ABC, subunit B [Saccharopolyspora erythraea NRRL
2338]
Length=700
Score = 1162 bits (3007), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 569/697 (82%), Positives = 623/697 (90%), Gaps = 2/697 (0%)
Query 2 RAGGHFEVVSPHAPAGDQPAAIDELERRINAGERDVVLLGATGTGKSATTAWLIERLQRP 61
R GG F +VS + PAGDQP AID+LERRIN+GE DVVLLGATGTGKSATTAWLIER+QRP
Sbjct 6 RTGGRFRMVSDYQPAGDQPQAIDDLERRINSGETDVVLLGATGTGKSATTAWLIERVQRP 65
Query 62 TLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDDV 121
TLV+ PNKTLAAQ ANELR P NAVEYFVSYYDYYQPEAY+ QTDTYIEKDSSIN+DV
Sbjct 66 TLVLEPNKTLAAQFANELRGFFPDNAVEYFVSYYDYYQPEAYVPQTDTYIEKDSSINEDV 125
Query 122 ERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVELKVGEEVPRDGLLRLLVDV 181
ERLRHSATS LLSRRD VVV+SVSCIYGLGTPQSYLDRS++L+VG E RD LLR LVDV
Sbjct 126 ERLRHSATSNLLSRRDCVVVSSVSCIYGLGTPQSYLDRSIQLQVGGETDRDVLLRALVDV 185
Query 182 QYTRNDMSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGEVIRQVDS 241
QYTRND++F RG+FRVRGDTVE+IP+YEELAVRIE FGDEI+ LYYLHPLTGEV+R+VD
Sbjct 186 QYTRNDIAFARGTFRVRGDTVEVIPAYEELAVRIEMFGDEIDRLYYLHPLTGEVVREVDE 245
Query 242 LRIFPATHYVAGPERMAHAVSAIEEELAERLAELESQGKLLEAQRLRMRTNYDIEMMRQV 301
LRIFPATHYVAGPERM A+ +IE EL E+LA+LE Q KLLEAQRLRMRT YDIEMMRQV
Sbjct 246 LRIFPATHYVAGPERMEKAIRSIEAELDEQLAKLEKQNKLLEAQRLRMRTQYDIEMMRQV 305
Query 302 GFCSGIENYSRHIDGRGPGTPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKRN 361
GFCSGIENYSRH+D R G+ PATLLDYFP+DFLL+IDESHVTVPQ+GGMYEGD SRKR
Sbjct 306 GFCSGIENYSRHVDDRPAGSAPATLLDYFPDDFLLIIDESHVTVPQVGGMYEGDASRKRT 365
Query 362 LVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQTGGEFVEQVIRPTGLVD 421
LVE+GFRLPSA DNRPLTWEEFADRIGQTVYLSATPGPYE+ Q GGEFVEQVIRPTGLVD
Sbjct 366 LVEHGFRLPSALDNRPLTWEEFADRIGQTVYLSATPGPYEMGQAGGEFVEQVIRPTGLVD 425
Query 422 PKVVVKPTKGQIDDLIGEIRTRADADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSEV 481
P+VVVKPT+GQIDDL+ EIR RA+ D+RVLVTTLTKKMAEDLTDY LE+GIRVRYLHSEV
Sbjct 426 PEVVVKPTEGQIDDLVHEIRERAERDERVLVTTLTKKMAEDLTDYFLELGIRVRYLHSEV 485
Query 482 DTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTIG 541
DTLRRVELLRQLRLG+YDVLVGINLLREGLDLPEVSLV+ILDADKEGFLRS SLIQTIG
Sbjct 486 DTLRRVELLRQLRLGEYDVLVGINLLREGLDLPEVSLVSILDADKEGFLRSGTSLIQTIG 545
Query 542 RAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNEANGIDPQPLRKKIADILDQV 601
RAARNVSG+VHMYAD+ITDSMR AIDET RRR KQIAYNE GIDPQPLRKKIADILD+V
Sbjct 546 RAARNVSGQVHMYADRITDSMRHAIDETNRRREKQIAYNEEKGIDPQPLRKKIADILDRV 605
Query 602 YREADDTAVVEVGGSGRNASRGRRAQGEPGRAVSAGVFEGRDTSAMPRAELADLIKDLTA 661
Y E++DT V VGGSGRN SRG++ GE SAG+ E RD +MPRAELADL++ L
Sbjct 606 YSESEDTEEVAVGGSGRNVSRGKKPSGEA--VGSAGLLEDRDIKSMPRAELADLVQQLND 663
Query 662 QMMAAARDLQFELAARFRDEIADLKRELRGMDAAGLK 698
QMM+AARDLQFELAAR RDEI DLK+ELRGMDAAG++
Sbjct 664 QMMSAARDLQFELAARLRDEIQDLKKELRGMDAAGIE 700
>gi|258653200|ref|YP_003202356.1| excinuclease ABC subunit B [Nakamurella multipartita DSM 44233]
gi|258556425|gb|ACV79367.1| excinuclease ABC, B subunit [Nakamurella multipartita DSM 44233]
Length=739
Score = 1157 bits (2994), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 566/702 (81%), Positives = 632/702 (91%), Gaps = 6/702 (0%)
Query 2 RAGGHFEVVSPHAPAGDQPAAIDELERRINAGERDVVLLGATGTGKSATTAWLIERLQRP 61
R G FEVVS + P+GDQP AI EL +R++AGE+DVVLLGATGTGKSATTAWLIE++QRP
Sbjct 23 RTSGRFEVVSDYQPSGDQPQAIAELRKRLDAGEKDVVLLGATGTGKSATTAWLIEQVQRP 82
Query 62 TLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDDV 121
TLVMAPNKTLAAQLANELRE+ P NAVEYFVSYYDYYQPEAY+ QTDTYIEKDSSIN+DV
Sbjct 83 TLVMAPNKTLAAQLANELRELFPENAVEYFVSYYDYYQPEAYVPQTDTYIEKDSSINNDV 142
Query 122 ERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVELKVGEEVPRDGLLRLLVDV 181
ERLRHSAT +LLSRRDV+VVASVSCIYGLGTPQSYLDRS+ + +G+++ RD LLR LV++
Sbjct 143 ERLRHSATMSLLSRRDVIVVASVSCIYGLGTPQSYLDRSLPVAIGQQIERDALLRALVEI 202
Query 182 QYTRNDMSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGEVIRQVDS 241
QY+RND+SFTRGSFRVRGDTVEIIP+YEELAVRIEFFGDE+E LYYLHPLTG+V+R+VDS
Sbjct 203 QYSRNDVSFTRGSFRVRGDTVEIIPAYEELAVRIEFFGDEVERLYYLHPLTGDVVREVDS 262
Query 242 LRIFPATHYVAGPERMAHAVSAIEEELAERLAELESQGKLLEAQRLRMRTNYDIEMMRQV 301
LRIFPATHYVAGPERMA A++AIE ELA+RLAELE QGKLLEAQRLRMRT+YD+EMMRQV
Sbjct 263 LRIFPATHYVAGPERMAKAIAAIETELAQRLAELEKQGKLLEAQRLRMRTSYDVEMMRQV 322
Query 302 GFCSGIENYSRHIDGRGPGTPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKRN 361
GFCSGIENYSRHIDGR G+ PATL+DYFP+DFLLVIDESHVTVPQIG MYEGD SRKR
Sbjct 323 GFCSGIENYSRHIDGRPGGSAPATLIDYFPDDFLLVIDESHVTVPQIGAMYEGDASRKRV 382
Query 362 LVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQTGGEFVEQVIRPTGLVD 421
LV++GFRLPSA DNRPLTWEEFA RIGQTVYLSATPGPYEL Q GEFVEQVIRPTGLVD
Sbjct 383 LVDHGFRLPSAMDNRPLTWEEFAGRIGQTVYLSATPGPYELGQAQGEFVEQVIRPTGLVD 442
Query 422 PKVVVKPTKGQIDDLIGEIRTRADADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSEV 481
P+VV+KPT+GQIDDLIGEIR R D+RVLVTTLTKKM+EDLTDYLLE+GIRVRYLHSEV
Sbjct 443 PEVVIKPTRGQIDDLIGEIRARTIRDERVLVTTLTKKMSEDLTDYLLELGIRVRYLHSEV 502
Query 482 DTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTIG 541
DTLRRVELLR+LRLG++DVLVGINLLREGLDLPEVSLVAILDADKEGFLRS SLIQTIG
Sbjct 503 DTLRRVELLRELRLGEFDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSETSLIQTIG 562
Query 542 RAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNEANGIDPQPLRKKIADILDQV 601
RAARNV+GEVHMYADKIT SM AIDET RRR KQ YN A+GIDP PLRKKI DIL V
Sbjct 563 RAARNVNGEVHMYADKITPSMERAIDETNRRREKQQEYNRAHGIDPMPLRKKINDILALV 622
Query 602 YREADDT----AVVEVGGSGRNASRGRRAQGEPGRAVS--AGVFEGRDTSAMPRAELADL 655
Y EAD+T + V+VGGSGRN+SRGR+AQGEPG S +GVF G +T+ M R+ELADL
Sbjct 623 YAEADNTVDGGSPVKVGGSGRNSSRGRKAQGEPGGKASKTSGVFAGHNTAGMARSELADL 682
Query 656 IKDLTAQMMAAARDLQFELAARFRDEIADLKRELRGMDAAGL 697
++ LT QMMAAARDL+FELA R RDEI++LKRE+R MDA+G+
Sbjct 683 VQQLTDQMMAAARDLKFELAGRLRDEISELKREIRDMDASGV 724
>gi|296393098|ref|YP_003657982.1| excinuclease ABC subunit B [Segniliparus rotundus DSM 44985]
gi|296180245|gb|ADG97151.1| excinuclease ABC, B subunit [Segniliparus rotundus DSM 44985]
Length=706
Score = 1115 bits (2884), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 550/691 (80%), Positives = 607/691 (88%), Gaps = 17/691 (2%)
Query 7 FEVVSPHAPAGDQPAAIDELERRINAGERDVVLLGATGTGKSATTAWLIERLQRPTLVMA 66
FEVVS H PAGDQPAAI EL+RRI AGERDVVLLGATGTGKSATTAWLIERLQRPTLVMA
Sbjct 32 FEVVSEHQPAGDQPAAIAELQRRIEAGERDVVLLGATGTGKSATTAWLIERLQRPTLVMA 91
Query 67 PNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDDVERLRH 126
PNKTLAAQLANELREMLP NAVEYFVSYYDYYQPEAYIAQTDTYIEKDSS+ND+VERLRH
Sbjct 92 PNKTLAAQLANELREMLPKNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSVNDNVERLRH 151
Query 127 SATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVELKVGEEVPRDGLLRLLVDVQYTRN 186
SAT LLSRRDVVVVASVSCIYGLG+PQSYLDRSV L G+E RD LLRLLVD+QY RN
Sbjct 152 SATRNLLSRRDVVVVASVSCIYGLGSPQSYLDRSVLLTKGQEAGRDKLLRLLVDMQYDRN 211
Query 187 DMSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGEVIRQVDSLRIFP 246
D++FTRG+FRVRGDTVEIIP+YEELAVR+EFFGDEI+ L YL+ LTG+V+ VD +RIFP
Sbjct 212 DVAFTRGTFRVRGDTVEIIPAYEELAVRVEFFGDEIDGLAYLNKLTGDVVANVDQVRIFP 271
Query 247 ATHYVAGPERMAHAVSAIEEELAERLAELESQGKLLEAQRLRMRTNYDIEMMRQVGFCSG 306
ATHY+ G RMA + AI +ELAERLA LE+QGKLLEAQRLRMRT YD+EM++QVGFCSG
Sbjct 272 ATHYITGEGRMAQVMEAIRQELAERLAVLEAQGKLLEAQRLRMRTEYDLEMIQQVGFCSG 331
Query 307 IENYSRHIDGRGPGTPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKRNLVEYG 366
IENYSRH+DGRGPGT PATLLDYFPEDFL VIDESHVTVPQIG M+EGD++RKRNLVEYG
Sbjct 332 IENYSRHMDGRGPGTAPATLLDYFPEDFLTVIDESHVTVPQIGAMFEGDMARKRNLVEYG 391
Query 367 FRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQTGGEFVEQVIRPTGLVDPKVVV 426
FRLPSA DNRPLTWEEF++R+GQTVYLSATPGPYEL Q GGEFVEQVIRPTGLVDPK+VV
Sbjct 392 FRLPSAVDNRPLTWEEFSERVGQTVYLSATPGPYELGQAGGEFVEQVIRPTGLVDPKIVV 451
Query 427 KPTKGQIDDLIGEIRTRADADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSEVDTLRR 486
KPTKGQIDDL+ EIR RA+ D+RVLVTTLTKKMAEDLTDYLLE+GIRVRYLHS++DTLRR
Sbjct 452 KPTKGQIDDLVHEIRQRAERDERVLVTTLTKKMAEDLTDYLLELGIRVRYLHSDIDTLRR 511
Query 487 VELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTIGRAARN 546
VELLR+LR G+YDVLVGINLLREGLDLPEVSLV ILDADKEGFLRS+ SLIQTIGRAARN
Sbjct 512 VELLRELRQGEYDVLVGINLLREGLDLPEVSLVCILDADKEGFLRSTTSLIQTIGRAARN 571
Query 547 VSGEVHMYADKITDSMREAIDETERRRAKQIAYNEANGIDPQPLRKKIADILDQVYREAD 606
VSGEVHMYAD ITDSMR AIDETERRRAKQIAYN NGIDP+PLRKKIADILD+VY E++
Sbjct 572 VSGEVHMYADTITDSMRNAIDETERRRAKQIAYNTENGIDPRPLRKKIADILDRVYEESE 631
Query 607 DTAVVEVGGSGRNASRGRRAQGEPGRAVSAGVFEGRDTSAMPRAELADLIKDLTAQMMAA 666
DTA +A + Q + SAG PR EL LI +L QM++A
Sbjct 632 DTA---------DAKSAKAPQKPSKKKTSAGT--------TPRTELVALIDELNEQMLSA 674
Query 667 ARDLQFELAARFRDEIADLKRELRGMDAAGL 697
AR+L+FELAAR RDE+A+ K+EL+GMDAAG+
Sbjct 675 ARELRFELAARLRDELAEYKKELKGMDAAGV 705
>gi|319949850|ref|ZP_08023863.1| excinuclease ABC subunit B [Dietzia cinnamea P4]
gi|319436489|gb|EFV91596.1| excinuclease ABC subunit B [Dietzia cinnamea P4]
Length=709
Score = 1097 bits (2837), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 550/696 (80%), Positives = 612/696 (88%), Gaps = 19/696 (2%)
Query 2 RAGGHFEVVSPHAPAGDQPAAIDELERRINAGERDVVLLGATGTGKSATTAWLIERLQRP 61
R+ FEVVS P+GDQP AI EL R+ GERDVVLLGATGTGKSATTAWLIE++QRP
Sbjct 32 RSTNRFEVVSEFTPSGDQPTAIAELSERLARGERDVVLLGATGTGKSATTAWLIEKVQRP 91
Query 62 TLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDDV 121
TLVMAPNKTLAAQLANELREMLP+NAVEYFVSYYDYYQPEAYIAQTDT+IEKDSSINDDV
Sbjct 92 TLVMAPNKTLAAQLANELREMLPNNAVEYFVSYYDYYQPEAYIAQTDTFIEKDSSINDDV 151
Query 122 ERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVELKVGEEVPRDGLLRLLVDV 181
ERLRHSATS+LLSRRDVVVV+SVSCIYGLGTPQSYLDRSV L VG+EV RD LLRLLVDV
Sbjct 152 ERLRHSATSSLLSRRDVVVVSSVSCIYGLGTPQSYLDRSVSLAVGQEVDRDQLLRLLVDV 211
Query 182 QYTRNDMSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGEVIRQVDS 241
QY RND+S TRG+FR +GDTV+IIP+YEELAVRIEFFGDE++ALYY+HPLTG+V+R+VD
Sbjct 212 QYERNDVSMTRGTFRAKGDTVDIIPTYEELAVRIEFFGDEVDALYYIHPLTGDVVRRVDE 271
Query 242 LRIFPATHYVAGPERMAHAVSAIEEELAERLAELESQGKLLEAQRLRMRTNYDIEMMRQV 301
+RIFPATHYVAGPERMA A+++IEEEL RLAELE+QGKLLEAQRLRMRT+YDIEMM+QV
Sbjct 272 VRIFPATHYVAGPERMAKAIASIEEELEVRLAELENQGKLLEAQRLRMRTSYDIEMMQQV 331
Query 302 GFCSGIENYSRHIDGRGPGTPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKRN 361
GFCSGIENYSRHIDGR G+ PATL+DYFPEDFL VIDESHVTVPQIG MYEGD SRKRN
Sbjct 332 GFCSGIENYSRHIDGRPAGSAPATLIDYFPEDFLTVIDESHVTVPQIGAMYEGDASRKRN 391
Query 362 LVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQTGGEFVEQVIRPTGLVD 421
LV++GFRLPSA DNRPLTWEEF+DR+GQTVYLSATPGPYE+ +TGGEFVEQVIRPTGLVD
Sbjct 392 LVDFGFRLPSALDNRPLTWEEFSDRVGQTVYLSATPGPYEMGRTGGEFVEQVIRPTGLVD 451
Query 422 PKVVVKPTKGQIDDLIGEIRTRADADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSEV 481
PK+VVKPTKGQIDDLIGEIR RA+ D+RVLVTTLTKKM+EDLTDYLLE+G+RVRYLHSE+
Sbjct 452 PKIVVKPTKGQIDDLIGEIRARAERDERVLVTTLTKKMSEDLTDYLLELGVRVRYLHSEI 511
Query 482 DTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTIG 541
DTL+RVELLR LR G+YDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSS SLIQTIG
Sbjct 512 DTLQRVELLRDLRRGEYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSTSLIQTIG 571
Query 542 RAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNEANGIDPQPLRKKIADILDQV 601
RAARNVSGEVHMYAD ITDSMR A++ETERRR KQIAYN +GIDPQPLRKKIADILD+V
Sbjct 572 RAARNVSGEVHMYADTITDSMRYAMEETERRREKQIAYNTEHGIDPQPLRKKIADILDRV 631
Query 602 YREADDTAVVEVGGSGRNASRGRRAQGEPGRAVSAGVFEGRDTSAMPRAELADLIKDLTA 661
E D+ G+ R G RA G+ R PR EL LI+++T
Sbjct 632 GEERSDS----TDGADRPELLGARAVGDAAR---------------PRKELEKLIEEMTE 672
Query 662 QMMAAARDLQFELAARFRDEIADLKRELRGMDAAGL 697
QMM+AA DL+FELA R RDEIA+L++EL+GM AG+
Sbjct 673 QMMSAATDLRFELAGRLRDEIAELRKELKGMREAGI 708
>gi|317506145|ref|ZP_07963968.1| excinuclease ABC [Segniliparus rugosus ATCC BAA-974]
gi|316255567|gb|EFV14814.1| excinuclease ABC [Segniliparus rugosus ATCC BAA-974]
Length=708
Score = 1096 bits (2834), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 541/692 (79%), Positives = 604/692 (88%), Gaps = 16/692 (2%)
Query 7 FEVVSPHAPAGDQPAAIDELERRINAGERDVVLLGATGTGKSATTAWLIERLQRPTLVMA 66
FEVVS H PAGDQP+AI EL+RR+ AGERDVVLLGATGTGKSATTAWLIERLQRPTL++A
Sbjct 33 FEVVSEHQPAGDQPSAIAELQRRVEAGERDVVLLGATGTGKSATTAWLIERLQRPTLLIA 92
Query 67 PNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDDVERLRH 126
PNKTLAAQLANELREMLP NAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDDVERLRH
Sbjct 93 PNKTLAAQLANELREMLPKNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDDVERLRH 152
Query 127 SATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVELKVGEEVPRDGLLRLLVDVQYTRN 186
SAT +LLSRRDVVVVASVSCIYGLG+PQSYLDRSV L G+EV RD LLRLLVD+QY RN
Sbjct 153 SATRSLLSRRDVVVVASVSCIYGLGSPQSYLDRSVLLVKGQEVARDQLLRLLVDMQYDRN 212
Query 187 DMSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGEVIRQVDSLRIFP 246
D++FTRG+FRVRGDT+EIIP+YEE AVRIEFFGDEI+AL YL+ LTG+V+ +VD +RIFP
Sbjct 213 DVAFTRGTFRVRGDTLEIIPAYEEFAVRIEFFGDEIDALSYLNKLTGDVVAEVDQVRIFP 272
Query 247 ATHYVAGPERMAHAVSAIEEELAERLAELESQGKLLEAQRLRMRTNYDIEMMRQVGFCSG 306
ATHYV G RMA + AI +ELAERLA LE+QGKLLEAQRLRMRT YD+EM++QVGFCSG
Sbjct 273 ATHYVTGEGRMAQVMEAIRQELAERLATLEAQGKLLEAQRLRMRTEYDLEMIQQVGFCSG 332
Query 307 IENYSRHIDGRGPGTPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKRNLVEYG 366
IENYSRH+DGRGPGT PATLLDYFPEDFL VIDESHVTVPQIG M+EGD++RKRNLVEYG
Sbjct 333 IENYSRHMDGRGPGTAPATLLDYFPEDFLTVIDESHVTVPQIGAMFEGDMARKRNLVEYG 392
Query 367 FRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQTGGEFVEQVIRPTGLVDPKVVV 426
FRLPSA DNRPLTWEEF++R+GQTVYLSATPGPYEL Q GGEFVEQVIRPTGLVDP VVV
Sbjct 393 FRLPSAVDNRPLTWEEFSERVGQTVYLSATPGPYELGQAGGEFVEQVIRPTGLVDPHVVV 452
Query 427 KPTKGQIDDLIGEIRTRADADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSEVDTLRR 486
KPT+GQIDDL+ EIR R + D+RVLVTTLTKKMAEDLTDYLLE+GIRVRYLHS++DTLRR
Sbjct 453 KPTQGQIDDLVHEIRLRTERDERVLVTTLTKKMAEDLTDYLLELGIRVRYLHSDIDTLRR 512
Query 487 VELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTIGRAARN 546
VELLR+LR G+YDVLVGINLLREGLDLPEVSLVAILDADKEGFLRS+ SLIQTIGRAARN
Sbjct 513 VELLRELRQGEYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSTTSLIQTIGRAARN 572
Query 547 VSGEVHMYADKITDSMREAIDETERRRAKQIAYNEANGIDPQPLRKKIADILDQVYREAD 606
VSGEVHMYAD+ITDSMR AI+ETERRR KQIAYN GIDP+PLRKKIADILD+VY E+
Sbjct 573 VSGEVHMYADRITDSMRNAIEETERRREKQIAYNLERGIDPKPLRKKIADILDRVYEESA 632
Query 607 DTAVVEVGGSGRNASRGRRAQGEPGRAVSAGVFEGRDTSAMPRAELADLIKDLTAQMMAA 666
DTA E ++ P+++L LI +L QM++A
Sbjct 633 DTADAEAKNGKAEKKTAKKKA----------------AGGTPKSDLEALIAELNEQMLSA 676
Query 667 ARDLQFELAARFRDEIADLKRELRGMDAAGLK 698
AR+L+FELAAR RDE+A+ K+ELRGM+AAG+K
Sbjct 677 ARELRFELAARLRDELAEYKKELRGMEAAGVK 708
Lambda K H
0.318 0.136 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1642596922742
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40