BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1635c Length=556 Score E Sequences producing significant alignments: (Bits) Value gi|339294590|gb|AEJ46701.1| hypothetical protein CCDC5079_1511 [... 1106 0.0 gi|15608773|ref|NP_216151.1| transmembrane protein [Mycobacteriu... 1106 0.0 gi|15841090|ref|NP_336127.1| hypothetical protein MT1671 [Mycoba... 1106 0.0 gi|340626640|ref|YP_004745092.1| hypothetical protein MCAN_16431... 1104 0.0 gi|289569681|ref|ZP_06449908.1| conserved membrane protein [Myco... 1104 0.0 gi|289750180|ref|ZP_06509558.1| conserved membrane protein [Myco... 847 0.0 gi|183982453|ref|YP_001850744.1| transmembrane protein [Mycobact... 846 0.0 gi|118617258|ref|YP_905590.1| transmembrane protein [Mycobacteri... 825 0.0 gi|240168016|ref|ZP_04746675.1| transmembrane protein [Mycobacte... 811 0.0 gi|15827724|ref|NP_301987.1| hypothetical protein ML1389 [Mycoba... 723 0.0 gi|342860787|ref|ZP_08717437.1| hypothetical protein MCOL_17988 ... 704 0.0 gi|41407436|ref|NP_960272.1| hypothetical protein MAP1338c [Myco... 703 0.0 gi|336457789|gb|EGO36783.1| putative membrane protein [Mycobacte... 689 0.0 gi|296164514|ref|ZP_06847085.1| transmembrane protein [Mycobacte... 688 0.0 gi|118465416|ref|YP_882322.1| hypothetical protein MAV_3138 [Myc... 675 0.0 gi|254820350|ref|ZP_05225351.1| hypothetical protein MintA_10496... 675 0.0 gi|254775590|ref|ZP_05217106.1| hypothetical protein MaviaA2_131... 672 0.0 gi|333990451|ref|YP_004523065.1| transmembrane protein [Mycobact... 494 2e-137 gi|254821948|ref|ZP_05226949.1| hypothetical protein MintA_18592... 439 7e-121 gi|336460234|gb|EGO39137.1| putative membrane protein [Mycobacte... 436 4e-120 gi|41409903|ref|NP_962739.1| hypothetical protein MAP3805c [Myco... 436 6e-120 gi|254777280|ref|ZP_05218796.1| hypothetical protein MaviaA2_217... 430 4e-118 gi|118465904|ref|YP_883967.1| hypothetical protein MAV_4843 [Myc... 429 5e-118 gi|342859197|ref|ZP_08715851.1| hypothetical protein MCOL_09973 ... 412 6e-113 gi|296167689|ref|ZP_06849935.1| transmembrane protein [Mycobacte... 412 7e-113 gi|145221072|ref|YP_001131750.1| hypothetical protein Mflv_0468 ... 281 3e-73 gi|229492507|ref|ZP_04386310.1| conserved hypothetical protein [... 263 8e-68 gi|226363383|ref|YP_002781165.1| mannosyltransferase [Rhodococcu... 244 4e-62 gi|111021093|ref|YP_704065.1| hypothetical protein RHA1_ro04110 ... 226 6e-57 gi|170782862|ref|YP_001711196.1| putative integral membrane prot... 168 2e-39 gi|148273547|ref|YP_001223109.1| hypothetical protein CMM_2364 [... 164 4e-38 gi|296141770|ref|YP_003649013.1| mannosyltransferase [Tsukamurel... 158 2e-36 gi|329941809|ref|ZP_08291074.1| integral membrane protein [Strep... 118 2e-24 gi|297625240|ref|YP_003687003.1| hypothetical protein PFREUD_004... 114 4e-23 gi|229819505|ref|YP_002881031.1| hypothetical protein Bcav_1008 ... 111 3e-22 gi|291435674|ref|ZP_06575064.1| conserved hypothetical protein [... 109 1e-21 gi|297192153|ref|ZP_06909551.1| conserved hypothetical protein [... 95.9 2e-17 gi|290958929|ref|YP_003490111.1| protein [Streptomyces scabiei 8... 92.8 1e-16 gi|345014391|ref|YP_004816745.1| integral membrane protein [Stre... 91.3 4e-16 gi|296268625|ref|YP_003651257.1| hypothetical protein Tbis_0638 ... 91.3 4e-16 gi|345010992|ref|YP_004813346.1| integral membrane protein [Stre... 91.3 4e-16 gi|271969641|ref|YP_003343837.1| membrane protein [Streptosporan... 90.1 9e-16 gi|297161360|gb|ADI11072.1| hypothetical protein SBI_07952 [Stre... 89.4 1e-15 gi|337763320|emb|CCB72028.1| conserved membrane protein of unkno... 88.6 3e-15 gi|329934823|ref|ZP_08284864.1| integral membrane protein [Strep... 87.4 6e-15 gi|302551810|ref|ZP_07304152.1| conserved hypothetical protein [... 87.0 8e-15 gi|297625250|ref|YP_003687013.1| hypothetical protein PFREUD_005... 87.0 9e-15 gi|337763492|emb|CCB72200.1| conserved membrane protein of unkno... 86.7 1e-14 gi|302534820|ref|ZP_07287162.1| predicted protein [Streptomyces ... 85.5 2e-14 gi|296268847|ref|YP_003651479.1| hypothetical protein Tbis_0862 ... 83.6 8e-14 >gi|339294590|gb|AEJ46701.1| hypothetical protein CCDC5079_1511 [Mycobacterium tuberculosis CCDC5079] Length=565 Score = 1106 bits (2860), Expect = 0.0, Method: Compositional matrix adjust. Identities = 556/556 (100%), Positives = 556/556 (100%), Gaps = 0/556 (0%) Query 1 MHASRPGAPPHAGLPSRRTAGDQDHRADPKVTRIMSASTLEQPAAAHVDELVARMRGRLL 60 MHASRPGAPPHAGLPSRRTAGDQDHRADPKVTRIMSASTLEQPAAAHVDELVARMRGRLL Sbjct 10 MHASRPGAPPHAGLPSRRTAGDQDHRADPKVTRIMSASTLEQPAAAHVDELVARMRGRLL 69 Query 61 DPLAIAVLAAVISGAWASRPSLWFDEGATISASASRTLPELWSLLGHIDAVHGLYYLLMH 120 DPLAIAVLAAVISGAWASRPSLWFDEGATISASASRTLPELWSLLGHIDAVHGLYYLLMH Sbjct 70 DPLAIAVLAAVISGAWASRPSLWFDEGATISASASRTLPELWSLLGHIDAVHGLYYLLMH 129 Query 121 GWFAIFPPTELWSRLPSCLAIGAAAAGVVVFAKQFSGRTTAVCAGAVFAILPRVTWAGIE 180 GWFAIFPPTELWSRLPSCLAIGAAAAGVVVFAKQFSGRTTAVCAGAVFAILPRVTWAGIE Sbjct 130 GWFAIFPPTELWSRLPSCLAIGAAAAGVVVFAKQFSGRTTAVCAGAVFAILPRVTWAGIE 189 Query 181 ARSSALSVAAAVWLTVLLVAAVRCNTQRRWLLYALVLMLSILVSINLALLVPAYATMVPL 240 ARSSALSVAAAVWLTVLLVAAVRCNTQRRWLLYALVLMLSILVSINLALLVPAYATMVPL Sbjct 190 ARSSALSVAAAVWLTVLLVAAVRCNTQRRWLLYALVLMLSILVSINLALLVPAYATMVPL 249 Query 241 LASGKSRKSPVIWWTVVTAAALGAMTPFILFAHGQVWQVGWIAGLNRNIILDVIHRQYFD 300 LASGKSRKSPVIWWTVVTAAALGAMTPFILFAHGQVWQVGWIAGLNRNIILDVIHRQYFD Sbjct 250 LASGKSRKSPVIWWTVVTAAALGAMTPFILFAHGQVWQVGWIAGLNRNIILDVIHRQYFD 309 Query 301 HSVPFAILAGLIVAAGIAAHLAGARGPGGDTHRLVLVSAAWIVVPTAVVLIYSATVEPIY 360 HSVPFAILAGLIVAAGIAAHLAGARGPGGDTHRLVLVSAAWIVVPTAVVLIYSATVEPIY Sbjct 310 HSVPFAILAGLIVAAGIAAHLAGARGPGGDTHRLVLVSAAWIVVPTAVVLIYSATVEPIY 369 Query 361 YPRYLILTAPAAAVILAVCVVTIARKPWLIAGVVFLLAAAAFPNYFFTQRGPYAKEGWDY 420 YPRYLILTAPAAAVILAVCVVTIARKPWLIAGVVFLLAAAAFPNYFFTQRGPYAKEGWDY Sbjct 370 YPRYLILTAPAAAVILAVCVVTIARKPWLIAGVVFLLAAAAFPNYFFTQRGPYAKEGWDY 429 Query 421 SQVADVISAHAKPGDCLLVDNTAGWRPGPIRALLATRPAAFRSLIDVERGTYGPKVGTLW 480 SQVADVISAHAKPGDCLLVDNTAGWRPGPIRALLATRPAAFRSLIDVERGTYGPKVGTLW Sbjct 430 SQVADVISAHAKPGDCLLVDNTAGWRPGPIRALLATRPAAFRSLIDVERGTYGPKVGTLW 489 Query 481 DGHVAVWLTTAKIDKCPTLWTIANRDKSLPDHQVGEMLSPGTGFGRTPVYRFPSYLGFRI 540 DGHVAVWLTTAKIDKCPTLWTIANRDKSLPDHQVGEMLSPGTGFGRTPVYRFPSYLGFRI Sbjct 490 DGHVAVWLTTAKIDKCPTLWTIANRDKSLPDHQVGEMLSPGTGFGRTPVYRFPSYLGFRI 549 Query 541 VERWQFHYSQVVKSTR 556 VERWQFHYSQVVKSTR Sbjct 550 VERWQFHYSQVVKSTR 565 >gi|15608773|ref|NP_216151.1| transmembrane protein [Mycobacterium tuberculosis H37Rv] gi|31792821|ref|NP_855314.1| hypothetical protein Mb1661c [Mycobacterium bovis AF2122/97] gi|121637542|ref|YP_977765.1| hypothetical protein BCG_1673c [Mycobacterium bovis BCG str. Pasteur 1173P2] 25 more sequence titles Length=556 Score = 1106 bits (2860), Expect = 0.0, Method: Compositional matrix adjust. Identities = 556/556 (100%), Positives = 556/556 (100%), Gaps = 0/556 (0%) Query 1 MHASRPGAPPHAGLPSRRTAGDQDHRADPKVTRIMSASTLEQPAAAHVDELVARMRGRLL 60 MHASRPGAPPHAGLPSRRTAGDQDHRADPKVTRIMSASTLEQPAAAHVDELVARMRGRLL Sbjct 1 MHASRPGAPPHAGLPSRRTAGDQDHRADPKVTRIMSASTLEQPAAAHVDELVARMRGRLL 60 Query 61 DPLAIAVLAAVISGAWASRPSLWFDEGATISASASRTLPELWSLLGHIDAVHGLYYLLMH 120 DPLAIAVLAAVISGAWASRPSLWFDEGATISASASRTLPELWSLLGHIDAVHGLYYLLMH Sbjct 61 DPLAIAVLAAVISGAWASRPSLWFDEGATISASASRTLPELWSLLGHIDAVHGLYYLLMH 120 Query 121 GWFAIFPPTELWSRLPSCLAIGAAAAGVVVFAKQFSGRTTAVCAGAVFAILPRVTWAGIE 180 GWFAIFPPTELWSRLPSCLAIGAAAAGVVVFAKQFSGRTTAVCAGAVFAILPRVTWAGIE Sbjct 121 GWFAIFPPTELWSRLPSCLAIGAAAAGVVVFAKQFSGRTTAVCAGAVFAILPRVTWAGIE 180 Query 181 ARSSALSVAAAVWLTVLLVAAVRCNTQRRWLLYALVLMLSILVSINLALLVPAYATMVPL 240 ARSSALSVAAAVWLTVLLVAAVRCNTQRRWLLYALVLMLSILVSINLALLVPAYATMVPL Sbjct 181 ARSSALSVAAAVWLTVLLVAAVRCNTQRRWLLYALVLMLSILVSINLALLVPAYATMVPL 240 Query 241 LASGKSRKSPVIWWTVVTAAALGAMTPFILFAHGQVWQVGWIAGLNRNIILDVIHRQYFD 300 LASGKSRKSPVIWWTVVTAAALGAMTPFILFAHGQVWQVGWIAGLNRNIILDVIHRQYFD Sbjct 241 LASGKSRKSPVIWWTVVTAAALGAMTPFILFAHGQVWQVGWIAGLNRNIILDVIHRQYFD 300 Query 301 HSVPFAILAGLIVAAGIAAHLAGARGPGGDTHRLVLVSAAWIVVPTAVVLIYSATVEPIY 360 HSVPFAILAGLIVAAGIAAHLAGARGPGGDTHRLVLVSAAWIVVPTAVVLIYSATVEPIY Sbjct 301 HSVPFAILAGLIVAAGIAAHLAGARGPGGDTHRLVLVSAAWIVVPTAVVLIYSATVEPIY 360 Query 361 YPRYLILTAPAAAVILAVCVVTIARKPWLIAGVVFLLAAAAFPNYFFTQRGPYAKEGWDY 420 YPRYLILTAPAAAVILAVCVVTIARKPWLIAGVVFLLAAAAFPNYFFTQRGPYAKEGWDY Sbjct 361 YPRYLILTAPAAAVILAVCVVTIARKPWLIAGVVFLLAAAAFPNYFFTQRGPYAKEGWDY 420 Query 421 SQVADVISAHAKPGDCLLVDNTAGWRPGPIRALLATRPAAFRSLIDVERGTYGPKVGTLW 480 SQVADVISAHAKPGDCLLVDNTAGWRPGPIRALLATRPAAFRSLIDVERGTYGPKVGTLW Sbjct 421 SQVADVISAHAKPGDCLLVDNTAGWRPGPIRALLATRPAAFRSLIDVERGTYGPKVGTLW 480 Query 481 DGHVAVWLTTAKIDKCPTLWTIANRDKSLPDHQVGEMLSPGTGFGRTPVYRFPSYLGFRI 540 DGHVAVWLTTAKIDKCPTLWTIANRDKSLPDHQVGEMLSPGTGFGRTPVYRFPSYLGFRI Sbjct 481 DGHVAVWLTTAKIDKCPTLWTIANRDKSLPDHQVGEMLSPGTGFGRTPVYRFPSYLGFRI 540 Query 541 VERWQFHYSQVVKSTR 556 VERWQFHYSQVVKSTR Sbjct 541 VERWQFHYSQVVKSTR 556 >gi|15841090|ref|NP_336127.1| hypothetical protein MT1671 [Mycobacterium tuberculosis CDC1551] gi|148822842|ref|YP_001287596.1| transmembrane protein [Mycobacterium tuberculosis F11] gi|167968412|ref|ZP_02550689.1| conserved transmembrane protein [Mycobacterium tuberculosis H37Ra] 43 more sequence titles Length=565 Score = 1106 bits (2860), Expect = 0.0, Method: Compositional matrix adjust. Identities = 556/556 (100%), Positives = 556/556 (100%), Gaps = 0/556 (0%) Query 1 MHASRPGAPPHAGLPSRRTAGDQDHRADPKVTRIMSASTLEQPAAAHVDELVARMRGRLL 60 MHASRPGAPPHAGLPSRRTAGDQDHRADPKVTRIMSASTLEQPAAAHVDELVARMRGRLL Sbjct 10 MHASRPGAPPHAGLPSRRTAGDQDHRADPKVTRIMSASTLEQPAAAHVDELVARMRGRLL 69 Query 61 DPLAIAVLAAVISGAWASRPSLWFDEGATISASASRTLPELWSLLGHIDAVHGLYYLLMH 120 DPLAIAVLAAVISGAWASRPSLWFDEGATISASASRTLPELWSLLGHIDAVHGLYYLLMH Sbjct 70 DPLAIAVLAAVISGAWASRPSLWFDEGATISASASRTLPELWSLLGHIDAVHGLYYLLMH 129 Query 121 GWFAIFPPTELWSRLPSCLAIGAAAAGVVVFAKQFSGRTTAVCAGAVFAILPRVTWAGIE 180 GWFAIFPPTELWSRLPSCLAIGAAAAGVVVFAKQFSGRTTAVCAGAVFAILPRVTWAGIE Sbjct 130 GWFAIFPPTELWSRLPSCLAIGAAAAGVVVFAKQFSGRTTAVCAGAVFAILPRVTWAGIE 189 Query 181 ARSSALSVAAAVWLTVLLVAAVRCNTQRRWLLYALVLMLSILVSINLALLVPAYATMVPL 240 ARSSALSVAAAVWLTVLLVAAVRCNTQRRWLLYALVLMLSILVSINLALLVPAYATMVPL Sbjct 190 ARSSALSVAAAVWLTVLLVAAVRCNTQRRWLLYALVLMLSILVSINLALLVPAYATMVPL 249 Query 241 LASGKSRKSPVIWWTVVTAAALGAMTPFILFAHGQVWQVGWIAGLNRNIILDVIHRQYFD 300 LASGKSRKSPVIWWTVVTAAALGAMTPFILFAHGQVWQVGWIAGLNRNIILDVIHRQYFD Sbjct 250 LASGKSRKSPVIWWTVVTAAALGAMTPFILFAHGQVWQVGWIAGLNRNIILDVIHRQYFD 309 Query 301 HSVPFAILAGLIVAAGIAAHLAGARGPGGDTHRLVLVSAAWIVVPTAVVLIYSATVEPIY 360 HSVPFAILAGLIVAAGIAAHLAGARGPGGDTHRLVLVSAAWIVVPTAVVLIYSATVEPIY Sbjct 310 HSVPFAILAGLIVAAGIAAHLAGARGPGGDTHRLVLVSAAWIVVPTAVVLIYSATVEPIY 369 Query 361 YPRYLILTAPAAAVILAVCVVTIARKPWLIAGVVFLLAAAAFPNYFFTQRGPYAKEGWDY 420 YPRYLILTAPAAAVILAVCVVTIARKPWLIAGVVFLLAAAAFPNYFFTQRGPYAKEGWDY Sbjct 370 YPRYLILTAPAAAVILAVCVVTIARKPWLIAGVVFLLAAAAFPNYFFTQRGPYAKEGWDY 429 Query 421 SQVADVISAHAKPGDCLLVDNTAGWRPGPIRALLATRPAAFRSLIDVERGTYGPKVGTLW 480 SQVADVISAHAKPGDCLLVDNTAGWRPGPIRALLATRPAAFRSLIDVERGTYGPKVGTLW Sbjct 430 SQVADVISAHAKPGDCLLVDNTAGWRPGPIRALLATRPAAFRSLIDVERGTYGPKVGTLW 489 Query 481 DGHVAVWLTTAKIDKCPTLWTIANRDKSLPDHQVGEMLSPGTGFGRTPVYRFPSYLGFRI 540 DGHVAVWLTTAKIDKCPTLWTIANRDKSLPDHQVGEMLSPGTGFGRTPVYRFPSYLGFRI Sbjct 490 DGHVAVWLTTAKIDKCPTLWTIANRDKSLPDHQVGEMLSPGTGFGRTPVYRFPSYLGFRI 549 Query 541 VERWQFHYSQVVKSTR 556 VERWQFHYSQVVKSTR Sbjct 550 VERWQFHYSQVVKSTR 565 >gi|340626640|ref|YP_004745092.1| hypothetical protein MCAN_16431 [Mycobacterium canettii CIPT 140010059] gi|340004830|emb|CCC43975.1| putative conserved transmembrane protein [Mycobacterium canettii CIPT 140010059] Length=556 Score = 1104 bits (2856), Expect = 0.0, Method: Compositional matrix adjust. Identities = 555/556 (99%), Positives = 555/556 (99%), Gaps = 0/556 (0%) Query 1 MHASRPGAPPHAGLPSRRTAGDQDHRADPKVTRIMSASTLEQPAAAHVDELVARMRGRLL 60 MHASRPGAPPHAGLPSRRTAGDQDHRADPKVTRIMSASTLEQPAAAHVDELVARMRGRLL Sbjct 1 MHASRPGAPPHAGLPSRRTAGDQDHRADPKVTRIMSASTLEQPAAAHVDELVARMRGRLL 60 Query 61 DPLAIAVLAAVISGAWASRPSLWFDEGATISASASRTLPELWSLLGHIDAVHGLYYLLMH 120 DPLAIAVLAAVISGAWASRPSLWFDEGATISASASRTLPELWSLLGHIDAVHGLYYLLMH Sbjct 61 DPLAIAVLAAVISGAWASRPSLWFDEGATISASASRTLPELWSLLGHIDAVHGLYYLLMH 120 Query 121 GWFAIFPPTELWSRLPSCLAIGAAAAGVVVFAKQFSGRTTAVCAGAVFAILPRVTWAGIE 180 GWFAIFPPTELWSRLPSCLAIGAAAAGVVVFAKQFSGRTTAVCAGAVFAILPRVTWAGIE Sbjct 121 GWFAIFPPTELWSRLPSCLAIGAAAAGVVVFAKQFSGRTTAVCAGAVFAILPRVTWAGIE 180 Query 181 ARSSALSVAAAVWLTVLLVAAVRCNTQRRWLLYALVLMLSILVSINLALLVPAYATMVPL 240 ARSSALSVAAAVWLTVLLVAAVRCNTQRRWLLYALVLMLSILVSINLALLVPAYATMVPL Sbjct 181 ARSSALSVAAAVWLTVLLVAAVRCNTQRRWLLYALVLMLSILVSINLALLVPAYATMVPL 240 Query 241 LASGKSRKSPVIWWTVVTAAALGAMTPFILFAHGQVWQVGWIAGLNRNIILDVIHRQYFD 300 LASGKSRKSPVIWWTVVTAAALGAMTPFILFAHGQVWQVGWIAGLNRNIILDVIHRQYFD Sbjct 241 LASGKSRKSPVIWWTVVTAAALGAMTPFILFAHGQVWQVGWIAGLNRNIILDVIHRQYFD 300 Query 301 HSVPFAILAGLIVAAGIAAHLAGARGPGGDTHRLVLVSAAWIVVPTAVVLIYSATVEPIY 360 HSVPFAIL GLIVAAGIAAHLAGARGPGGDTHRLVLVSAAWIVVPTAVVLIYSATVEPIY Sbjct 301 HSVPFAILGGLIVAAGIAAHLAGARGPGGDTHRLVLVSAAWIVVPTAVVLIYSATVEPIY 360 Query 361 YPRYLILTAPAAAVILAVCVVTIARKPWLIAGVVFLLAAAAFPNYFFTQRGPYAKEGWDY 420 YPRYLILTAPAAAVILAVCVVTIARKPWLIAGVVFLLAAAAFPNYFFTQRGPYAKEGWDY Sbjct 361 YPRYLILTAPAAAVILAVCVVTIARKPWLIAGVVFLLAAAAFPNYFFTQRGPYAKEGWDY 420 Query 421 SQVADVISAHAKPGDCLLVDNTAGWRPGPIRALLATRPAAFRSLIDVERGTYGPKVGTLW 480 SQVADVISAHAKPGDCLLVDNTAGWRPGPIRALLATRPAAFRSLIDVERGTYGPKVGTLW Sbjct 421 SQVADVISAHAKPGDCLLVDNTAGWRPGPIRALLATRPAAFRSLIDVERGTYGPKVGTLW 480 Query 481 DGHVAVWLTTAKIDKCPTLWTIANRDKSLPDHQVGEMLSPGTGFGRTPVYRFPSYLGFRI 540 DGHVAVWLTTAKIDKCPTLWTIANRDKSLPDHQVGEMLSPGTGFGRTPVYRFPSYLGFRI Sbjct 481 DGHVAVWLTTAKIDKCPTLWTIANRDKSLPDHQVGEMLSPGTGFGRTPVYRFPSYLGFRI 540 Query 541 VERWQFHYSQVVKSTR 556 VERWQFHYSQVVKSTR Sbjct 541 VERWQFHYSQVVKSTR 556 >gi|289569681|ref|ZP_06449908.1| conserved membrane protein [Mycobacterium tuberculosis T17] gi|289543435|gb|EFD47083.1| conserved membrane protein [Mycobacterium tuberculosis T17] Length=556 Score = 1104 bits (2856), Expect = 0.0, Method: Compositional matrix adjust. Identities = 555/556 (99%), Positives = 556/556 (100%), Gaps = 0/556 (0%) Query 1 MHASRPGAPPHAGLPSRRTAGDQDHRADPKVTRIMSASTLEQPAAAHVDELVARMRGRLL 60 MHASRPGAPPHAGLPSRRTAGDQDHRADPKVTRIMSASTLEQPAAAHVDELVARMRGRLL Sbjct 1 MHASRPGAPPHAGLPSRRTAGDQDHRADPKVTRIMSASTLEQPAAAHVDELVARMRGRLL 60 Query 61 DPLAIAVLAAVISGAWASRPSLWFDEGATISASASRTLPELWSLLGHIDAVHGLYYLLMH 120 DPLAIAVLAAVISGAWASRPSLWFDEGATISASASRTLPELWSLLGHIDAVHGLYYLLMH Sbjct 61 DPLAIAVLAAVISGAWASRPSLWFDEGATISASASRTLPELWSLLGHIDAVHGLYYLLMH 120 Query 121 GWFAIFPPTELWSRLPSCLAIGAAAAGVVVFAKQFSGRTTAVCAGAVFAILPRVTWAGIE 180 GWFAIFPPTELWSRLPSCLAIGAAAAGVVVFAKQFSGRTTAVCAGA+FAILPRVTWAGIE Sbjct 121 GWFAIFPPTELWSRLPSCLAIGAAAAGVVVFAKQFSGRTTAVCAGAMFAILPRVTWAGIE 180 Query 181 ARSSALSVAAAVWLTVLLVAAVRCNTQRRWLLYALVLMLSILVSINLALLVPAYATMVPL 240 ARSSALSVAAAVWLTVLLVAAVRCNTQRRWLLYALVLMLSILVSINLALLVPAYATMVPL Sbjct 181 ARSSALSVAAAVWLTVLLVAAVRCNTQRRWLLYALVLMLSILVSINLALLVPAYATMVPL 240 Query 241 LASGKSRKSPVIWWTVVTAAALGAMTPFILFAHGQVWQVGWIAGLNRNIILDVIHRQYFD 300 LASGKSRKSPVIWWTVVTAAALGAMTPFILFAHGQVWQVGWIAGLNRNIILDVIHRQYFD Sbjct 241 LASGKSRKSPVIWWTVVTAAALGAMTPFILFAHGQVWQVGWIAGLNRNIILDVIHRQYFD 300 Query 301 HSVPFAILAGLIVAAGIAAHLAGARGPGGDTHRLVLVSAAWIVVPTAVVLIYSATVEPIY 360 HSVPFAILAGLIVAAGIAAHLAGARGPGGDTHRLVLVSAAWIVVPTAVVLIYSATVEPIY Sbjct 301 HSVPFAILAGLIVAAGIAAHLAGARGPGGDTHRLVLVSAAWIVVPTAVVLIYSATVEPIY 360 Query 361 YPRYLILTAPAAAVILAVCVVTIARKPWLIAGVVFLLAAAAFPNYFFTQRGPYAKEGWDY 420 YPRYLILTAPAAAVILAVCVVTIARKPWLIAGVVFLLAAAAFPNYFFTQRGPYAKEGWDY Sbjct 361 YPRYLILTAPAAAVILAVCVVTIARKPWLIAGVVFLLAAAAFPNYFFTQRGPYAKEGWDY 420 Query 421 SQVADVISAHAKPGDCLLVDNTAGWRPGPIRALLATRPAAFRSLIDVERGTYGPKVGTLW 480 SQVADVISAHAKPGDCLLVDNTAGWRPGPIRALLATRPAAFRSLIDVERGTYGPKVGTLW Sbjct 421 SQVADVISAHAKPGDCLLVDNTAGWRPGPIRALLATRPAAFRSLIDVERGTYGPKVGTLW 480 Query 481 DGHVAVWLTTAKIDKCPTLWTIANRDKSLPDHQVGEMLSPGTGFGRTPVYRFPSYLGFRI 540 DGHVAVWLTTAKIDKCPTLWTIANRDKSLPDHQVGEMLSPGTGFGRTPVYRFPSYLGFRI Sbjct 481 DGHVAVWLTTAKIDKCPTLWTIANRDKSLPDHQVGEMLSPGTGFGRTPVYRFPSYLGFRI 540 Query 541 VERWQFHYSQVVKSTR 556 VERWQFHYSQVVKSTR Sbjct 541 VERWQFHYSQVVKSTR 556 >gi|289750180|ref|ZP_06509558.1| conserved membrane protein [Mycobacterium tuberculosis T92] gi|289690767|gb|EFD58196.1| conserved membrane protein [Mycobacterium tuberculosis T92] Length=474 Score = 847 bits (2187), Expect = 0.0, Method: Compositional matrix adjust. Identities = 434/434 (100%), Positives = 434/434 (100%), Gaps = 0/434 (0%) Query 1 MHASRPGAPPHAGLPSRRTAGDQDHRADPKVTRIMSASTLEQPAAAHVDELVARMRGRLL 60 MHASRPGAPPHAGLPSRRTAGDQDHRADPKVTRIMSASTLEQPAAAHVDELVARMRGRLL Sbjct 10 MHASRPGAPPHAGLPSRRTAGDQDHRADPKVTRIMSASTLEQPAAAHVDELVARMRGRLL 69 Query 61 DPLAIAVLAAVISGAWASRPSLWFDEGATISASASRTLPELWSLLGHIDAVHGLYYLLMH 120 DPLAIAVLAAVISGAWASRPSLWFDEGATISASASRTLPELWSLLGHIDAVHGLYYLLMH Sbjct 70 DPLAIAVLAAVISGAWASRPSLWFDEGATISASASRTLPELWSLLGHIDAVHGLYYLLMH 129 Query 121 GWFAIFPPTELWSRLPSCLAIGAAAAGVVVFAKQFSGRTTAVCAGAVFAILPRVTWAGIE 180 GWFAIFPPTELWSRLPSCLAIGAAAAGVVVFAKQFSGRTTAVCAGAVFAILPRVTWAGIE Sbjct 130 GWFAIFPPTELWSRLPSCLAIGAAAAGVVVFAKQFSGRTTAVCAGAVFAILPRVTWAGIE 189 Query 181 ARSSALSVAAAVWLTVLLVAAVRCNTQRRWLLYALVLMLSILVSINLALLVPAYATMVPL 240 ARSSALSVAAAVWLTVLLVAAVRCNTQRRWLLYALVLMLSILVSINLALLVPAYATMVPL Sbjct 190 ARSSALSVAAAVWLTVLLVAAVRCNTQRRWLLYALVLMLSILVSINLALLVPAYATMVPL 249 Query 241 LASGKSRKSPVIWWTVVTAAALGAMTPFILFAHGQVWQVGWIAGLNRNIILDVIHRQYFD 300 LASGKSRKSPVIWWTVVTAAALGAMTPFILFAHGQVWQVGWIAGLNRNIILDVIHRQYFD Sbjct 250 LASGKSRKSPVIWWTVVTAAALGAMTPFILFAHGQVWQVGWIAGLNRNIILDVIHRQYFD 309 Query 301 HSVPFAILAGLIVAAGIAAHLAGARGPGGDTHRLVLVSAAWIVVPTAVVLIYSATVEPIY 360 HSVPFAILAGLIVAAGIAAHLAGARGPGGDTHRLVLVSAAWIVVPTAVVLIYSATVEPIY Sbjct 310 HSVPFAILAGLIVAAGIAAHLAGARGPGGDTHRLVLVSAAWIVVPTAVVLIYSATVEPIY 369 Query 361 YPRYLILTAPAAAVILAVCVVTIARKPWLIAGVVFLLAAAAFPNYFFTQRGPYAKEGWDY 420 YPRYLILTAPAAAVILAVCVVTIARKPWLIAGVVFLLAAAAFPNYFFTQRGPYAKEGWDY Sbjct 370 YPRYLILTAPAAAVILAVCVVTIARKPWLIAGVVFLLAAAAFPNYFFTQRGPYAKEGWDY 429 Query 421 SQVADVISAHAKPG 434 SQVADVISAHAKPG Sbjct 430 SQVADVISAHAKPG 443 >gi|183982453|ref|YP_001850744.1| transmembrane protein [Mycobacterium marinum M] gi|183175779|gb|ACC40889.1| conserved transmembrane protein [Mycobacterium marinum M] Length=571 Score = 846 bits (2185), Expect = 0.0, Method: Compositional matrix adjust. Identities = 425/558 (77%), Positives = 466/558 (84%), Gaps = 4/558 (0%) Query 3 ASRPGAPP--HAGLPS--RRTAGDQDHRADPKVTRIMSASTLEQPAAAHVDELVARMRGR 58 A++PG PP P R+ DQDHR VT IMS TLEQ A A R RGR Sbjct 14 AAQPGGPPKPRGQRPPNPRKMTRDQDHRWALTVTSIMSTPTLEQGATATDKAERVRPRGR 73 Query 59 LLDPLAIAVLAAVISGAWASRPSLWFDEGATISASASRTLPELWSLLGHIDAVHGLYYLL 118 LDP +A+LA +IS AWA +PSLWFDEGATISA+A+RTLPELW LLGHIDAVHG YYLL Sbjct 74 RLDPWLMALLATLISVAWAGKPSLWFDEGATISAAANRTLPELWKLLGHIDAVHGFYYLL 133 Query 119 MHGWFAIFPPTELWSRLPSCLAIGAAAAGVVVFAKQFSGRTTAVCAGAVFAILPRVTWAG 178 MHGW+AIFPPTE WSR+PS LAIG AAAGVVVF KQFSGR+TA+CAGAVFAILPRVTWAG Sbjct 134 MHGWYAIFPPTEFWSRVPSSLAIGGAAAGVVVFTKQFSGRSTALCAGAVFAILPRVTWAG 193 Query 179 IEARSSALSVAAAVWLTVLLVAAVRCNTQRRWLLYALVLMLSILVSINLALLVPAYATMV 238 IEARSSALSVAAAVWLTVLLVAAVR N WLLYALVLM+SIL++INL LLVP Y ++ Sbjct 194 IEARSSALSVAAAVWLTVLLVAAVRRNRPWLWLLYALVLMVSILININLGLLVPVYGALL 253 Query 239 PLLASGKSRKSPVIWWTVVTAAALGAMTPFILFAHGQVWQVGWIAGLNRNIILDVIHRQY 298 PLLA KSRKSP IWW V + A+GAMTPF+LFAHGQVWQVGWI+GLNRN+ LDV+HRQY Sbjct 254 PLLAPKKSRKSPGIWWAVTSVVAIGAMTPFVLFAHGQVWQVGWISGLNRNLFLDVVHRQY 313 Query 299 FDHSVPFAILAGLIVAAGIAAHLAGARGPGGDTHRLVLVSAAWIVVPTAVVLIYSATVEP 358 FDHSV FAILAG++V A IA L G PG T L+L S AW+V+PT +VL+YSA VEP Sbjct 314 FDHSVAFAILAGVLVVAAIAVRLTGIARPGEGTRPLLLASIAWVVIPTGIVLLYSAIVEP 373 Query 359 IYYPRYLILTAPAAAVILAVCVVTIARKPWLIAGVVFLLAAAAFPNYFFTQRGPYAKEGW 418 IYYPRYLILTAPAAAVILAVC+VT+ARKPWLI GVV LLA AAFPNYFFTQRGPYAKEGW Sbjct 374 IYYPRYLILTAPAAAVILAVCIVTLARKPWLITGVVVLLAVAAFPNYFFTQRGPYAKEGW 433 Query 419 DYSQVADVISAHAKPGDCLLVDNTAGWRPGPIRALLATRPAAFRSLIDVERGTYGPKVGT 478 DYSQVADVISAHA PGDCLLVDNT W+PGP+RALLATRPAAFRSLIDVERG YGPKVGT Sbjct 434 DYSQVADVISAHAAPGDCLLVDNTVPWKPGPVRALLATRPAAFRSLIDVERGAYGPKVGT 493 Query 479 LWDGHVAVWLTTAKIDKCPTLWTIANRDKSLPDHQVGEMLSPGTGFGRTPVYRFPSYLGF 538 LWDGHVAVWLTT KI+KC TLWTI+NRD +LPDH+VG LSPGT FG+TPVY FP YLGF Sbjct 494 LWDGHVAVWLTTEKINKCSTLWTISNRDNALPDHEVGPALSPGTAFGKTPVYLFPHYLGF 553 Query 539 RIVERWQFHYSQVVKSTR 556 IVERWQFHYSQV+KSTR Sbjct 554 HIVERWQFHYSQVIKSTR 571 >gi|118617258|ref|YP_905590.1| transmembrane protein [Mycobacterium ulcerans Agy99] gi|118569368|gb|ABL04119.1| conserved transmembrane protein [Mycobacterium ulcerans Agy99] Length=522 Score = 825 bits (2130), Expect = 0.0, Method: Compositional matrix adjust. Identities = 409/522 (79%), Positives = 447/522 (86%), Gaps = 0/522 (0%) Query 35 MSASTLEQPAAAHVDELVARMRGRLLDPLAIAVLAAVISGAWASRPSLWFDEGATISASA 94 MS TLEQ A A R RGR LDP +A+LA +IS AWA RPSLWFDEGATISA+A Sbjct 1 MSTPTLEQGATATDKAERVRPRGRRLDPWLMALLATLISVAWAGRPSLWFDEGATISAAA 60 Query 95 SRTLPELWSLLGHIDAVHGLYYLLMHGWFAIFPPTELWSRLPSCLAIGAAAAGVVVFAKQ 154 +RTLPELW LLGHIDAVHG YYLLMHGW+AIFPPTE WSR+PS LAIG AAAGVVVF KQ Sbjct 61 NRTLPELWKLLGHIDAVHGFYYLLMHGWYAIFPPTEFWSRVPSSLAIGGAAAGVVVFTKQ 120 Query 155 FSGRTTAVCAGAVFAILPRVTWAGIEARSSALSVAAAVWLTVLLVAAVRCNTQRRWLLYA 214 FSGR+TA+CAGAVFAILPRVTWAGIEARSSALSVAAAVWLTVLLVAAVR + WLLYA Sbjct 121 FSGRSTALCAGAVFAILPRVTWAGIEARSSALSVAAAVWLTVLLVAAVRRDRPWLWLLYA 180 Query 215 LVLMLSILVSINLALLVPAYATMVPLLASGKSRKSPVIWWTVVTAAALGAMTPFILFAHG 274 LVLM+SIL++INL LLVP Y ++PLLA KSRKSP IWW V + A+GAMTPF+LFAHG Sbjct 181 LVLMVSILININLGLLVPVYGALLPLLAPKKSRKSPGIWWAVTSVVAIGAMTPFVLFAHG 240 Query 275 QVWQVGWIAGLNRNIILDVIHRQYFDHSVPFAILAGLIVAAGIAAHLAGARGPGGDTHRL 334 QVWQVGWI+GLNRN+ LDV+HRQYFDHSV FAILAG++V A IA L G PG T L Sbjct 241 QVWQVGWISGLNRNLFLDVVHRQYFDHSVAFAILAGVLVVAAIAVRLTGIARPGEGTRPL 300 Query 335 VLVSAAWIVVPTAVVLIYSATVEPIYYPRYLILTAPAAAVILAVCVVTIARKPWLIAGVV 394 +L S AW+V+PT +VL+YSA VEPIYYPRYLILTAPAAAVILAVC+VT+ARKPWLI GVV Sbjct 301 LLASIAWVVIPTGIVLLYSAIVEPIYYPRYLILTAPAAAVILAVCIVTLARKPWLITGVV 360 Query 395 FLLAAAAFPNYFFTQRGPYAKEGWDYSQVADVISAHAKPGDCLLVDNTAGWRPGPIRALL 454 LLA AAFPNYFFTQRGPYAKEGWDYSQVADVIS HA PGDCLLVDNT W+PGP+RALL Sbjct 361 VLLAVAAFPNYFFTQRGPYAKEGWDYSQVADVISTHAAPGDCLLVDNTVPWKPGPVRALL 420 Query 455 ATRPAAFRSLIDVERGTYGPKVGTLWDGHVAVWLTTAKIDKCPTLWTIANRDKSLPDHQV 514 ATRPAAFRSLIDVERG YGPKVGTLWDGHVAVWLTT KI+KC TLWTI+NRD +LPDH+V Sbjct 421 ATRPAAFRSLIDVERGAYGPKVGTLWDGHVAVWLTTEKINKCSTLWTISNRDNALPDHEV 480 Query 515 GEMLSPGTGFGRTPVYRFPSYLGFRIVERWQFHYSQVVKSTR 556 G LSPGT FG+TPVY FP YLGF IVERWQFHYSQV+KSTR Sbjct 481 GPALSPGTAFGKTPVYLFPHYLGFHIVERWQFHYSQVIKSTR 522 >gi|240168016|ref|ZP_04746675.1| transmembrane protein [Mycobacterium kansasii ATCC 12478] Length=527 Score = 811 bits (2096), Expect = 0.0, Method: Compositional matrix adjust. Identities = 425/529 (81%), Positives = 460/529 (87%), Gaps = 5/529 (0%) Query 31 VTRIMSASTLEQ---PAAAHVDELVARMRGRLLDPLAIAVLAAVISGAWASRPSLWFDEG 87 +T IMSA TL+Q P AA + RGR LDP AIA+LAAV+SGAWASRPSLWFDEG Sbjct 1 MTGIMSAPTLDQDTAPPAAGAAH--SHARGRRLDPWAIALLAAVVSGAWASRPSLWFDEG 58 Query 88 ATISASASRTLPELWSLLGHIDAVHGLYYLLMHGWFAIFPPTELWSRLPSCLAIGAAAAG 147 ATISASA RTLPELW+LLGHIDAVHGLYYLLMHGWFAIFPPTE WSR+PS LAIGAAA G Sbjct 59 ATISASARRTLPELWNLLGHIDAVHGLYYLLMHGWFAIFPPTEFWSRVPSSLAIGAAAGG 118 Query 148 VVVFAKQFSGRTTAVCAGAVFAILPRVTWAGIEARSSALSVAAAVWLTVLLVAAVRCNTQ 207 VVVFAKQFSGR+TA+CAGAVFAILPRVTWAGIEARSSALSV AAVWLTVLLV AVR N Sbjct 119 VVVFAKQFSGRSTALCAGAVFAILPRVTWAGIEARSSALSVTAAVWLTVLLVTAVRRNKP 178 Query 208 RRWLLYALVLMLSILVSINLALLVPAYATMVPLLASGKSRKSPVIWWTVVTAAALGAMTP 267 WLLYAL LMLSIL+SINL LLVP YA ++PLLA +SRK+P IWW V + AA+GAMTP Sbjct 179 WVWLLYALGLMLSILISINLGLLVPVYAALLPLLAPAQSRKAPTIWWAVASLAAVGAMTP 238 Query 268 FILFAHGQVWQVGWIAGLNRNIILDVIHRQYFDHSVPFAILAGLIVAAGIAAHLAGARGP 327 F+ FAHGQVWQVGWI+GLNRN+ LDV+HRQYFDHSVPFAIL+G++V A L GA GP Sbjct 239 FVRFAHGQVWQVGWISGLNRNLFLDVVHRQYFDHSVPFAILSGVVVVAAAVLRLTGAPGP 298 Query 328 GGDTHRLVLVSAAWIVVPTAVVLIYSATVEPIYYPRYLILTAPAAAVILAVCVVTIARKP 387 G T L+L AW+VVPTAVVLIYSATVEPIYYPRYLILTAP AAVILA+C+V++ARKP Sbjct 299 GEGTRPLLLAGVAWVVVPTAVVLIYSATVEPIYYPRYLILTAPGAAVILAICIVSVARKP 358 Query 388 WLIAGVVFLLAAAAFPNYFFTQRGPYAKEGWDYSQVADVISAHAKPGDCLLVDNTAGWRP 447 WLIAG V + AAAAFPNY+FTQRGPYAKEGWDYSQVADVISAHA PGDCLLVDNT WRP Sbjct 359 WLIAGAVAVFAAAAFPNYYFTQRGPYAKEGWDYSQVADVISAHAAPGDCLLVDNTVPWRP 418 Query 448 GPIRALLATRPAAFRSLIDVERGTYGPKVGTLWDGHVAVWLTTAKIDKCPTLWTIANRDK 507 GPIRALLATRPAAFRSL+DVERG YGPK GTLWDGHVAVWLTTAKI+KC TLWTI NRDK Sbjct 419 GPIRALLATRPAAFRSLVDVERGAYGPKAGTLWDGHVAVWLTTAKINKCTTLWTITNRDK 478 Query 508 SLPDHQVGEMLSPGTGFGRTPVYRFPSYLGFRIVERWQFHYSQVVKSTR 556 SLPDHQVG+ LSPGT FGRTPVY+FP YLGF IVERWQFHYSQVVKSTR Sbjct 479 SLPDHQVGQRLSPGTAFGRTPVYQFPGYLGFHIVERWQFHYSQVVKSTR 527 >gi|15827724|ref|NP_301987.1| hypothetical protein ML1389 [Mycobacterium leprae TN] gi|221230201|ref|YP_002503617.1| hypothetical protein MLBr_01389 [Mycobacterium leprae Br4923] gi|13093275|emb|CAC31770.1| conserved membrane protein [Mycobacterium leprae] gi|219933308|emb|CAR71484.1| conserved membrane protein [Mycobacterium leprae Br4923] Length=527 Score = 723 bits (1867), Expect = 0.0, Method: Compositional matrix adjust. Identities = 377/528 (72%), Positives = 429/528 (82%), Gaps = 3/528 (0%) Query 31 VTRIMSASTLEQPAAAHVDELVARMR--GRLLDPLAIAVLAAVISGAWASRPSLWFDEGA 88 +T IMS S LEQ +AA V + AR G L D LAIA+LA VISGAWASRPSLWFDE A Sbjct 1 MTSIMSVSALEQ-SAADVGDNSARQHAHGALPDSLAIAMLATVISGAWASRPSLWFDEAA 59 Query 89 TISASASRTLPELWSLLGHIDAVHGLYYLLMHGWFAIFPPTELWSRLPSCLAIGAAAAGV 148 TISASASRT+PELW LL HIDAVHGLYYLLMHGWFAIFP TE WSR+PSCLAIGAAAAGV Sbjct 60 TISASASRTVPELWRLLSHIDAVHGLYYLLMHGWFAIFPSTEFWSRVPSCLAIGAAAAGV 119 Query 149 VVFAKQFSGRTTAVCAGAVFAILPRVTWAGIEARSSALSVAAAVWLTVLLVAAVRCNTQR 208 VF +QF+ RTTAV AG VFAILPR+TWAGIEARSSALSVAAA+WLTVLLVA+V+ N R Sbjct 120 TVFTRQFATRTTAVYAGIVFAILPRITWAGIEARSSALSVAAAMWLTVLLVASVQRNRPR 179 Query 209 RWLLYALVLMLSILVSINLALLVPAYATMVPLLASGKSRKSPVIWWTVVTAAALGAMTPF 268 WL YAL LMLSIL+++ LA LV YA ++P LA K R SP IWW V + ALG +TPF Sbjct 180 LWLCYALTLMLSILLNLTLATLVLVYAVILPWLAPNKFRNSPFIWWAVTSVVALGTITPF 239 Query 269 ILFAHGQVWQVGWIAGLNRNIILDVIHRQYFDHSVPFAILAGLIVAAGIAAHLAGARGPG 328 ILFAHGQVWQV WI ++ + + D+ RQYFDHSV FAI +I+ IA LAG R P Sbjct 240 ILFAHGQVWQVDWIFRVSWHYVFDITQRQYFDHSVSFAIATAVIIVPAIATRLAGLRAPA 299 Query 329 GDTHRLVLVSAAWIVVPTAVVLIYSATVEPIYYPRYLILTAPAAAVILAVCVVTIARKPW 388 GD LV++ AWIV+PT +++ YSA +EP+YYPRYLILTAPAAA+++AVC+VT+ARKPW Sbjct 300 GDLRSLVIICTAWIVIPTTLMVGYSAVIEPVYYPRYLILTAPAAAIVIAVCIVTVARKPW 359 Query 389 LIAGVVFLLAAAAFPNYFFTQRGPYAKEGWDYSQVADVISAHAKPGDCLLVDNTAGWRPG 448 IAGV+ L A AAFPNY FTQRG YAKEGWDYSQVADVIS+ A PGDCL+VDNT WRPG Sbjct 360 PIAGVLVLFAVAAFPNYLFTQRGRYAKEGWDYSQVADVISSQAAPGDCLIVDNTVPWRPG 419 Query 449 PIRALLATRPAAFRSLIDVERGTYGPKVGTLWDGHVAVWLTTAKIDKCPTLWTIANRDKS 508 PIRALLA RPAAFRSLID+ERG YGP VGTLWDGHV VWL TAKI+KC T+WT+++RD S Sbjct 420 PIRALLAARPAAFRSLIDIERGFYGPTVGTLWDGHVPVWLVTAKINKCSTVWTVSDRDTS 479 Query 509 LPDHQVGEMLSPGTGFGRTPVYRFPSYLGFRIVERWQFHYSQVVKSTR 556 LPDHQ G++LSPG GR P Y+FPSYLGFRIVERWQFHYSQV+KSTR Sbjct 480 LPDHQAGQLLSPGLILGRAPAYQFPSYLGFRIVERWQFHYSQVIKSTR 527 >gi|342860787|ref|ZP_08717437.1| hypothetical protein MCOL_17988 [Mycobacterium colombiense CECT 3035] gi|342131811|gb|EGT85068.1| hypothetical protein MCOL_17988 [Mycobacterium colombiense CECT 3035] Length=527 Score = 704 bits (1818), Expect = 0.0, Method: Compositional matrix adjust. Identities = 363/527 (69%), Positives = 408/527 (78%), Gaps = 5/527 (0%) Query 35 MSASTLE---QPAAAHVDELVA--RMRGRLLDPLAIAVLAAVISGAWASRPSLWFDEGAT 89 MS TLE +P A A R RG LLDP AIA+ A +S AWA RPSLWFDEGAT Sbjct 1 MSMPTLEPTVEPGAGDFGGAPAPGRARGGLLDPWAIALFATAVSAAWACRPSLWFDEGAT 60 Query 90 ISASASRTLPELWSLLGHIDAVHGLYYLLMHGWFAIFPPTELWSRLPSCLAIGAAAAGVV 149 ISA+ASRTLPELW LLGHIDAVHG YYLLMHGWFA+FPPTE WSR PS LAIGAAAAGV Sbjct 61 ISAAASRTLPELWRLLGHIDAVHGAYYLLMHGWFALFPPTEFWSRFPSSLAIGAAAAGVT 120 Query 150 VFAKQFSGRTTAVCAGAVFAILPRVTWAGIEARSSALSVAAAVWLTVLLVAAVRCNTQRR 209 VF +QFS R AVCAGA+FAILPR TWAG+EAR A AAAVWLTVL V VR N R Sbjct 121 VFTRQFSTRPAAVCAGAIFAILPRTTWAGMEARPYAFVAAAAVWLTVLFVGTVRLNRPRG 180 Query 210 WLLYALVLMLSILVSINLALLVPAYATMVPLLASGKSRKSPVIWWTVVTAAALGAMTPFI 269 W+ YAL LMLSIL+++NL LLVP Y M+PLLA +RKSP I W +A A+ AMTPF+ Sbjct 181 WVWYALGLMLSILLNLNLVLLVPVYGAMLPLLAPRGARKSPAIRWAAASAVAVAAMTPFL 240 Query 270 LFAHGQVWQVGWIAGLNRNIILDVIHRQYFDHSVPFAILAGLIVAAGIAAHLAGARGPGG 329 +FAH QVWQV WI ++ + D+I RQYFDHSV FAI + +++ A AG P G Sbjct 241 VFAHNQVWQVNWIYPVSWHYAFDIILRQYFDHSVAFAIASAVLIVAAAVTRWAGVPAPAG 300 Query 330 DTHRLVLVSAAWIVVPTAVVLIYSATVEPIYYPRYLILTAPAAAVILAVCVVTIARKPWL 389 D RL+L++ AW+V+PTA+V+IYSA EPIYYPRYLI TAPA AV+LAVC+VT+ R+PW Sbjct 301 DLRRLLLIATAWMVIPTALVVIYSAVSEPIYYPRYLIFTAPAMAVVLAVCLVTVFRRPWP 360 Query 390 IAGVVFLLAAAAFPNYFFTQRGPYAKEGWDYSQVADVISAHAKPGDCLLVDNTAGWRPGP 449 IAG V + A AA PNY F QR PYAKEGWDYSQVAD+IS HA PGDCL+VDNT WRPGP Sbjct 361 IAGGVLVFAVAAVPNYLFVQRWPYAKEGWDYSQVADLISTHAAPGDCLMVDNTVPWRPGP 420 Query 450 IRALLATRPAAFRSLIDVERGTYGPKVGTLWDGHVAVWLTTAKIDKCPTLWTIANRDKSL 509 IRALLATRPAAFRSLIDVERG YGPKVG+LWDGHVAVWLTTAKI+KCP +WTI N+D SL Sbjct 421 IRALLATRPAAFRSLIDVERGVYGPKVGSLWDGHVAVWLTTAKINKCPAIWTITNKDNSL 480 Query 510 PDHQVGEMLSPGTGFGRTPVYRFPSYLGFRIVERWQFHYSQVVKSTR 556 PDHQ G+ L PG FGR P YRFP YLGF IVERWQFHYSQVVKSTR Sbjct 481 PDHQAGQSLPPGKAFGRAPAYRFPGYLGFHIVERWQFHYSQVVKSTR 527 >gi|41407436|ref|NP_960272.1| hypothetical protein MAP1338c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395788|gb|AAS03655.1| hypothetical protein MAP_1338c [Mycobacterium avium subsp. paratuberculosis K-10] Length=616 Score = 703 bits (1814), Expect = 0.0, Method: Compositional matrix adjust. Identities = 368/540 (69%), Positives = 429/540 (80%), Gaps = 5/540 (0%) Query 22 DQDHRADPKVTRIMSASTLEQPAAAHVDELVA-----RMRGRLLDPLAIAVLAAVISGAW 76 + HRA PKVT IMS TLE + ++VA R RGRLLDP AIAVLA +S AW Sbjct 77 EPPHRARPKVTSIMSMPTLEPTFESGAGDIVAEPAPRRPRGRLLDPWAIAVLATALSAAW 136 Query 77 ASRPSLWFDEGATISASASRTLPELWSLLGHIDAVHGLYYLLMHGWFAIFPPTELWSRLP 136 A RPSLWFDEGATISA+A+RTLPELW LLGHIDAVHG YYLLMHGWFA+FPPTE +SR P Sbjct 137 ACRPSLWFDEGATISAAANRTLPELWRLLGHIDAVHGAYYLLMHGWFALFPPTEFFSRFP 196 Query 137 SCLAIGAAAAGVVVFAKQFSGRTTAVCAGAVFAILPRVTWAGIEARSSALSVAAAVWLTV 196 S LA+GAAAAGV VF +QF+ R TAVCAGAVFA+LPR+TWAG+EAR A AAAVWLTV Sbjct 197 SALAVGAAAAGVTVFTRQFAPRRTAVCAGAVFALLPRMTWAGMEARPYAFVAAAAVWLTV 256 Query 197 LLVAAVRCNTQRRWLLYALVLMLSILVSINLALLVPAYATMVPLLASGKSRKSPVIWWTV 256 L VAAVR RRW+ YAL LML+IL+++N+ L+VP Y M+PLL + +R+S +WW Sbjct 257 LFVAAVRRGAPRRWVGYALALMLAILLNLNMVLMVPVYGVMLPLLTARGARRSAALWWAG 316 Query 257 VTAAALGAMTPFILFAHGQVWQVGWIAGLNRNIILDVIHRQYFDHSVPFAILAGLIVAAG 316 +A A+GAMTPF+LFAH QVWQV WI ++ + D+I RQYFDHSV A+L+ +++ A Sbjct 317 SSAVAVGAMTPFLLFAHNQVWQVNWIYPVSWHYAFDIILRQYFDHSVALAVLSAVLIVAA 376 Query 317 IAAHLAGARGPGGDTHRLVLVSAAWIVVPTAVVLIYSATVEPIYYPRYLILTAPAAAVIL 376 A LAG P GD RL+++ AAW+V+PTA+V++YSA EPIYYPRYLI TAPA A++L Sbjct 377 AVARLAGVPAPPGDLRRLLILCAAWMVIPTALVVVYSAVGEPIYYPRYLIFTAPAMAIVL 436 Query 377 AVCVVTIARKPWLIAGVVFLLAAAAFPNYFFTQRGPYAKEGWDYSQVADVISAHAKPGDC 436 AVC+VT+AR+PW IAG V L A AA PNY F QR PYAKEGWDYSQVAD+I +HA PGDC Sbjct 437 AVCIVTLARRPWPIAGAVLLCAVAALPNYLFVQRWPYAKEGWDYSQVADLIGSHAAPGDC 496 Query 437 LLVDNTAGWRPGPIRALLATRPAAFRSLIDVERGTYGPKVGTLWDGHVAVWLTTAKIDKC 496 LLVDNT WRPGPIRALLATRPAAFRSLIDVERG YGPKVGTLWDGHVA+WLTTAKI+KC Sbjct 497 LLVDNTVPWRPGPIRALLATRPAAFRSLIDVERGAYGPKVGTLWDGHVAIWLTTAKINKC 556 Query 497 PTLWTIANRDKSLPDHQVGEMLSPGTGFGRTPVYRFPSYLGFRIVERWQFHYSQVVKSTR 556 T+WTI N+D SLPDHQ G+ L PG+ FG+ P YRFP YLGF IVERWQFHYSQVVKSTR Sbjct 557 STIWTITNKDNSLPDHQSGQSLPPGSAFGQAPAYRFPGYLGFHIVERWQFHYSQVVKSTR 616 >gi|336457789|gb|EGO36783.1| putative membrane protein [Mycobacterium avium subsp. paratuberculosis S397] Length=525 Score = 689 bits (1779), Expect = 0.0, Method: Compositional matrix adjust. Identities = 357/523 (69%), Positives = 417/523 (80%), Gaps = 5/523 (0%) Query 39 TLEQPAAAHVDELVA-----RMRGRLLDPLAIAVLAAVISGAWASRPSLWFDEGATISAS 93 TLE + ++VA R RGRLLDP AIAVLA +S AWA RPSLWFDEGATISA+ Sbjct 3 TLEPTFESGAGDIVAEPAPRRPRGRLLDPWAIAVLATALSAAWACRPSLWFDEGATISAA 62 Query 94 ASRTLPELWSLLGHIDAVHGLYYLLMHGWFAIFPPTELWSRLPSCLAIGAAAAGVVVFAK 153 A+RTLPELW LLGHIDAVHG YYLLMHGWFA+FPPTE +SR PS LA+GAAAAGV VF + Sbjct 63 ANRTLPELWRLLGHIDAVHGAYYLLMHGWFALFPPTEFFSRFPSALAVGAAAAGVTVFTR 122 Query 154 QFSGRTTAVCAGAVFAILPRVTWAGIEARSSALSVAAAVWLTVLLVAAVRCNTQRRWLLY 213 QF+ R TAVCAGAVFA+LPR+TWAG+EAR A AAAVWLTVL VAAVR RRW+ Y Sbjct 123 QFAPRRTAVCAGAVFALLPRMTWAGMEARPYAFVAAAAVWLTVLFVAAVRRGAPRRWVGY 182 Query 214 ALVLMLSILVSINLALLVPAYATMVPLLASGKSRKSPVIWWTVVTAAALGAMTPFILFAH 273 AL LML+IL+++N+ L+VP Y M+PLL + +R+S +WW +A A+GAMTPF+LFAH Sbjct 183 ALALMLAILLNLNMVLMVPVYGVMLPLLTARGARRSAALWWAGSSAVAVGAMTPFLLFAH 242 Query 274 GQVWQVGWIAGLNRNIILDVIHRQYFDHSVPFAILAGLIVAAGIAAHLAGARGPGGDTHR 333 QVWQV WI ++ + D+I RQYFDHSV A+L+ +++ A LAG P GD R Sbjct 243 NQVWQVNWIYPVSWHYAFDIILRQYFDHSVALAVLSAVLIVAAAVTRLAGVPAPPGDLRR 302 Query 334 LVLVSAAWIVVPTAVVLIYSATVEPIYYPRYLILTAPAAAVILAVCVVTIARKPWLIAGV 393 L+++ AAW+V+PTA+V++YSA EPIYYPRYLI TAPA A++LAVC+VT+AR+PW IAG Sbjct 303 LLILCAAWMVIPTALVVVYSAVGEPIYYPRYLIFTAPAMAIVLAVCIVTLARRPWPIAGA 362 Query 394 VFLLAAAAFPNYFFTQRGPYAKEGWDYSQVADVISAHAKPGDCLLVDNTAGWRPGPIRAL 453 V L A AA PNY F QR PYAKEGWDYSQVAD+I +HA PGDCLLVDNT WRPGPIRAL Sbjct 363 VLLCAVAALPNYLFVQRWPYAKEGWDYSQVADLIGSHAAPGDCLLVDNTVPWRPGPIRAL 422 Query 454 LATRPAAFRSLIDVERGTYGPKVGTLWDGHVAVWLTTAKIDKCPTLWTIANRDKSLPDHQ 513 LATRPAAFRSLIDVERG YGPKVGTLWDGHVA+WLTTAKI+KC T+WTI N+D SLPDHQ Sbjct 423 LATRPAAFRSLIDVERGAYGPKVGTLWDGHVAIWLTTAKINKCSTIWTITNKDNSLPDHQ 482 Query 514 VGEMLSPGTGFGRTPVYRFPSYLGFRIVERWQFHYSQVVKSTR 556 G+ L PG+ FG+ P YRFP YLGF IVERWQFHYSQVVKSTR Sbjct 483 SGQSLPPGSAFGQAPAYRFPGYLGFHIVERWQFHYSQVVKSTR 525 >gi|296164514|ref|ZP_06847085.1| transmembrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295900114|gb|EFG79549.1| transmembrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=527 Score = 688 bits (1775), Expect = 0.0, Method: Compositional matrix adjust. Identities = 380/527 (73%), Positives = 424/527 (81%), Gaps = 1/527 (0%) Query 31 VTRIMSASTLEQPAAAHVDELV-ARMRGRLLDPLAIAVLAAVISGAWASRPSLWFDEGAT 89 +T IMS T+ Q V++ AR GRLLDP AIAV AAV+SGAWA RPSLWFDEGAT Sbjct 1 MTSIMSMPTVAQRVEDEVEKPAPARRPGRLLDPWAIAVFAAVVSGAWACRPSLWFDEGAT 60 Query 90 ISASASRTLPELWSLLGHIDAVHGLYYLLMHGWFAIFPPTELWSRLPSCLAIGAAAAGVV 149 ISA+ASRTLPELW LLGHIDAVHGLYYLLMHGWFA+FPPTE WSR PS LA+GAAAAGV Sbjct 61 ISAAASRTLPELWRLLGHIDAVHGLYYLLMHGWFALFPPTEFWSRAPSALAVGAAAAGVT 120 Query 150 VFAKQFSGRTTAVCAGAVFAILPRVTWAGIEARSSALSVAAAVWLTVLLVAAVRCNTQRR 209 VFA+QFS R AVCAG +FAILPR TWAG+EAR A + AAA WLTVLLVAA + N R Sbjct 121 VFARQFSTRPIAVCAGVLFAILPRTTWAGMEARPYAFAAAAAAWLTVLLVAAAKRNRPRL 180 Query 210 WLLYALVLMLSILVSINLALLVPAYATMVPLLASGKSRKSPVIWWTVVTAAALGAMTPFI 269 W YAL LML+IL+++NL LLVP YA MVPLLA K+RKSPVIWW V + A+GAM PFI Sbjct 181 WACYALALMLAILLNLNLVLLVPVYAVMVPLLAPEKARKSPVIWWAVSSTVAVGAMVPFI 240 Query 270 LFAHGQVWQVGWIAGLNRNIILDVIHRQYFDHSVPFAILAGLIVAAGIAAHLAGARGPGG 329 +FAH QVWQV WI ++ + D+I RQYFDHSVPFAILA +++ A +AA LAG P G Sbjct 241 VFAHAQVWQVNWIYPVSWHYAFDIILRQYFDHSVPFAILAAVLIVAAVAARLAGVPPPPG 300 Query 330 DTHRLVLVSAAWIVVPTAVVLIYSATVEPIYYPRYLILTAPAAAVILAVCVVTIARKPWL 389 D RL++ AAW+VVPTA+V++YSA EPIYYPRYLI TAPA AV+LAVC+VTIAR P Sbjct 301 DMRRLLIACAAWLVVPTALVVVYSAVNEPIYYPRYLIFTAPAMAVVLAVCIVTIARGPRR 360 Query 390 IAGVVFLLAAAAFPNYFFTQRGPYAKEGWDYSQVADVISAHAKPGDCLLVDNTAGWRPGP 449 IAGVV L A AA PNY F QR PYAKEGWDYSQVAD+I +HA PGDCL+VDNT WRPGP Sbjct 361 IAGVVLLCALAAVPNYLFVQRWPYAKEGWDYSQVADLIGSHAAPGDCLMVDNTVPWRPGP 420 Query 450 IRALLATRPAAFRSLIDVERGTYGPKVGTLWDGHVAVWLTTAKIDKCPTLWTIANRDKSL 509 IRALLATRPAAFRSLIDVERG YGP VG+LWDGHVAVWLTTAKI+KCP +WTI N+D SL Sbjct 421 IRALLATRPAAFRSLIDVERGAYGPTVGSLWDGHVAVWLTTAKINKCPAIWTITNKDSSL 480 Query 510 PDHQVGEMLSPGTGFGRTPVYRFPSYLGFRIVERWQFHYSQVVKSTR 556 PDHQ G L PG FGR P YRFPSYLGF IVERWQFHYSQVVKSTR Sbjct 481 PDHQSGASLPPGPTFGRAPAYRFPSYLGFHIVERWQFHYSQVVKSTR 527 >gi|118465416|ref|YP_882322.1| hypothetical protein MAV_3138 [Mycobacterium avium 104] gi|118166703|gb|ABK67600.1| conserved hypothetical protein [Mycobacterium avium 104] Length=498 Score = 675 bits (1742), Expect = 0.0, Method: Compositional matrix adjust. Identities = 349/498 (71%), Positives = 406/498 (82%), Gaps = 0/498 (0%) Query 59 LLDPLAIAVLAAVISGAWASRPSLWFDEGATISASASRTLPELWSLLGHIDAVHGLYYLL 118 +LDP AIAVLA +S AWA RPSLWFDEGATISA+ASRTLPELW LLGHIDAVHG YYLL Sbjct 1 MLDPWAIAVLATALSAAWACRPSLWFDEGATISAAASRTLPELWRLLGHIDAVHGAYYLL 60 Query 119 MHGWFAIFPPTELWSRLPSCLAIGAAAAGVVVFAKQFSGRTTAVCAGAVFAILPRVTWAG 178 MHGWFA+FPPTE +SRLPS LA+GAAAAGV VF +QF+ R TAVCAGAVFA+LPR+TWAG Sbjct 61 MHGWFALFPPTEFFSRLPSALAVGAAAAGVTVFTRQFAPRRTAVCAGAVFALLPRMTWAG 120 Query 179 IEARSSALSVAAAVWLTVLLVAAVRCNTQRRWLLYALVLMLSILVSINLALLVPAYATMV 238 +EAR A AAAVWLTVL VAAVR R W+ YAL LML+IL+++N+ L+VP Y M+ Sbjct 121 MEARPYAFVAAAAVWLTVLFVAAVRRGAPRGWVGYALALMLAILLNLNMVLMVPVYGVML 180 Query 239 PLLASGKSRKSPVIWWTVVTAAALGAMTPFILFAHGQVWQVGWIAGLNRNIILDVIHRQY 298 PLL + +R+S +WW +A A+GAMTPF+LFAH QVWQV WI ++ + D+I RQY Sbjct 181 PLLTARGARRSAALWWAGSSAVAVGAMTPFLLFAHNQVWQVNWIYPVSWHYAFDIILRQY 240 Query 299 FDHSVPFAILAGLIVAAGIAAHLAGARGPGGDTHRLVLVSAAWIVVPTAVVLIYSATVEP 358 FDHSV A+L+ +++ A A LAG P GD RL+++ AAW+V+PTA+V++YSA EP Sbjct 241 FDHSVALAVLSAVLIVAAAVARLAGVPAPPGDLRRLLILCAAWMVIPTALVVVYSAVAEP 300 Query 359 IYYPRYLILTAPAAAVILAVCVVTIARKPWLIAGVVFLLAAAAFPNYFFTQRGPYAKEGW 418 IYYPRYLI TAPA A++LAVC+VT+AR+PW IAG V L A AA PNY F QR PYAKEGW Sbjct 301 IYYPRYLIFTAPAMAIVLAVCIVTLARRPWPIAGAVLLCAVAALPNYLFVQRWPYAKEGW 360 Query 419 DYSQVADVISAHAKPGDCLLVDNTAGWRPGPIRALLATRPAAFRSLIDVERGTYGPKVGT 478 DYSQVAD+I +HA PGDCLLVDNT WRPGPIRALLATRPAAFRSLIDVERG YGPKVGT Sbjct 361 DYSQVADLIGSHAAPGDCLLVDNTVPWRPGPIRALLATRPAAFRSLIDVERGAYGPKVGT 420 Query 479 LWDGHVAVWLTTAKIDKCPTLWTIANRDKSLPDHQVGEMLSPGTGFGRTPVYRFPSYLGF 538 LWDGHVA+WLTTAKI+KC T+WTI N+D SLPDHQ G+ L PG+ FG+ P YRFP YLGF Sbjct 421 LWDGHVAIWLTTAKINKCSTIWTITNKDNSLPDHQSGQSLPPGSAFGQAPAYRFPGYLGF 480 Query 539 RIVERWQFHYSQVVKSTR 556 IVERWQFHYSQVVKSTR Sbjct 481 HIVERWQFHYSQVVKSTR 498 >gi|254820350|ref|ZP_05225351.1| hypothetical protein MintA_10496 [Mycobacterium intracellulare ATCC 13950] Length=527 Score = 675 bits (1741), Expect = 0.0, Method: Compositional matrix adjust. Identities = 368/527 (70%), Positives = 419/527 (80%), Gaps = 5/527 (0%) Query 35 MSASTLE---QPAAAHV-DELVAR-MRGRLLDPLAIAVLAAVISGAWASRPSLWFDEGAT 89 MS TLE +P A V D+ VA RGRLLDP AIA+ A +S AWA RPSLWFDEGAT Sbjct 1 MSMPTLEPIFEPRAGDVVDKTVAAGPRGRLLDPWAIALFATAVSAAWACRPSLWFDEGAT 60 Query 90 ISASASRTLPELWSLLGHIDAVHGLYYLLMHGWFAIFPPTELWSRLPSCLAIGAAAAGVV 149 ISA+ASRTLPELW LLGHIDAVHG YYL+MHGWFA+FPPTE +SRLPS LA+GAAAAGV Sbjct 61 ISAAASRTLPELWRLLGHIDAVHGAYYLVMHGWFALFPPTEFFSRLPSALAVGAAAAGVT 120 Query 150 VFAKQFSGRTTAVCAGAVFAILPRVTWAGIEARSSALSVAAAVWLTVLLVAAVRCNTQRR 209 VF K+F+ R TAVCAG VFAILPR TWAG+EARS AA+VWLTVL VAAVR N R Sbjct 121 VFTKKFATRPTAVCAGVVFAILPRTTWAGMEARSYGFVAAASVWLTVLFVAAVRRNRPRW 180 Query 210 WLLYALVLMLSILVSINLALLVPAYATMVPLLASGKSRKSPVIWWTVVTAAALGAMTPFI 269 W+ YAL L LSIL+++NL LLVP Y ++PLL G SR+SPV+WW +A A+GAM PF Sbjct 181 WICYALALALSILLNVNLVLLVPVYGAILPLLLPGGSRRSPVVWWATSSAVAVGAMIPFA 240 Query 270 LFAHGQVWQVGWIAGLNRNIILDVIHRQYFDHSVPFAILAGLIVAAGIAAHLAGARGPGG 329 LFAHGQVWQVGWI ++ + D+I RQYFDHSV FA+L+ +++ A A LAGA P G Sbjct 241 LFAHGQVWQVGWIYPVSWHYAFDIILRQYFDHSVAFAVLSAVVIVAAALARLAGAPAPAG 300 Query 330 DTHRLVLVSAAWIVVPTAVVLIYSATVEPIYYPRYLILTAPAAAVILAVCVVTIARKPWL 389 D RL+ W+V+PTA+V+IYSA EPIYYPRYLI TAPA A++LAVC+VT+AR+PW Sbjct 301 DLRRLLTFCVVWMVIPTALVVIYSAVSEPIYYPRYLIFTAPAMAIVLAVCIVTLARRPWP 360 Query 390 IAGVVFLLAAAAFPNYFFTQRGPYAKEGWDYSQVADVISAHAKPGDCLLVDNTAGWRPGP 449 + G V L AA PNY F QR PYAKEGWDYSQVAD+I+AHA PGDCL+VDNT WRPGP Sbjct 361 MVGAVLLFVIAAVPNYLFVQRWPYAKEGWDYSQVADLIAAHAAPGDCLMVDNTVPWRPGP 420 Query 450 IRALLATRPAAFRSLIDVERGTYGPKVGTLWDGHVAVWLTTAKIDKCPTLWTIANRDKSL 509 IRALLATRPAAFRSLIDVERG YGPKVG+LWDGHVAVWLTTAKIDKCPT+WTI N+D SL Sbjct 421 IRALLATRPAAFRSLIDVERGVYGPKVGSLWDGHVAVWLTTAKIDKCPTIWTITNKDASL 480 Query 510 PDHQVGEMLSPGTGFGRTPVYRFPSYLGFRIVERWQFHYSQVVKSTR 556 PDHQ G+ L PG+ FGR P YRFP YLGF IVERWQFHYSQVVKSTR Sbjct 481 PDHQAGQSLPPGSAFGRAPAYRFPGYLGFHIVERWQFHYSQVVKSTR 527 >gi|254775590|ref|ZP_05217106.1| hypothetical protein MaviaA2_13108 [Mycobacterium avium subsp. avium ATCC 25291] Length=498 Score = 672 bits (1734), Expect = 0.0, Method: Compositional matrix adjust. Identities = 347/498 (70%), Positives = 404/498 (82%), Gaps = 0/498 (0%) Query 59 LLDPLAIAVLAAVISGAWASRPSLWFDEGATISASASRTLPELWSLLGHIDAVHGLYYLL 118 +LDP AIAVLA +S AWA RPSLWFDEGATISA+ASRTLPE W LLGHIDAVHG YYLL Sbjct 1 MLDPWAIAVLATALSAAWACRPSLWFDEGATISAAASRTLPEFWRLLGHIDAVHGAYYLL 60 Query 119 MHGWFAIFPPTELWSRLPSCLAIGAAAAGVVVFAKQFSGRTTAVCAGAVFAILPRVTWAG 178 MHGWFA+FPPTE +SRLPS LA+GAAAAGV VF +QF+ R T VCAGAVFA+LPR+TWAG Sbjct 61 MHGWFALFPPTEFFSRLPSALAVGAAAAGVTVFTRQFAPRRTTVCAGAVFALLPRMTWAG 120 Query 179 IEARSSALSVAAAVWLTVLLVAAVRCNTQRRWLLYALVLMLSILVSINLALLVPAYATMV 238 +EAR A AAAVWLTVL VAAVR R W+ YAL LML+IL+++N+ L+VP Y M+ Sbjct 121 MEARPYAFVAAAAVWLTVLFVAAVRRGAPRPWIGYALALMLAILLNLNMVLMVPVYGVML 180 Query 239 PLLASGKSRKSPVIWWTVVTAAALGAMTPFILFAHGQVWQVGWIAGLNRNIILDVIHRQY 298 PLL + +R+S +WW +A A+GAMTPF+LFAH QVWQV WI ++ + D+I RQY Sbjct 181 PLLTARGARRSAALWWAGSSAVAVGAMTPFLLFAHNQVWQVNWIYPVSWHYAFDIILRQY 240 Query 299 FDHSVPFAILAGLIVAAGIAAHLAGARGPGGDTHRLVLVSAAWIVVPTAVVLIYSATVEP 358 FDHSV A+L+ +++ A A LAG P GD RL+++ AAW+V+PTA+V++YSA EP Sbjct 241 FDHSVALAVLSAVLIVAAAVARLAGVPAPPGDLRRLLILCAAWMVIPTALVVVYSAVGEP 300 Query 359 IYYPRYLILTAPAAAVILAVCVVTIARKPWLIAGVVFLLAAAAFPNYFFTQRGPYAKEGW 418 IYYPRYLI TAPA A++LAVC+VT+AR+PW IAG V L A AA PNY F QR PYAKEGW Sbjct 301 IYYPRYLIFTAPAMAIVLAVCIVTLARRPWSIAGAVLLCAVAALPNYLFVQRWPYAKEGW 360 Query 419 DYSQVADVISAHAKPGDCLLVDNTAGWRPGPIRALLATRPAAFRSLIDVERGTYGPKVGT 478 DYSQVAD+I +HA PGDCLLVDNT WRPGPIRALLATRPAAFRSLIDVERG YGPKVGT Sbjct 361 DYSQVADLIGSHAAPGDCLLVDNTVPWRPGPIRALLATRPAAFRSLIDVERGAYGPKVGT 420 Query 479 LWDGHVAVWLTTAKIDKCPTLWTIANRDKSLPDHQVGEMLSPGTGFGRTPVYRFPSYLGF 538 LWDGHVA+WLTTAKI+KC T+WTI N+D SLPDHQ G+ L PG+ FG+ P YRFP YLGF Sbjct 421 LWDGHVAIWLTTAKINKCSTIWTITNKDNSLPDHQSGQSLPPGSAFGQAPAYRFPGYLGF 480 Query 539 RIVERWQFHYSQVVKSTR 556 IVERWQFHYSQVVKSTR Sbjct 481 HIVERWQFHYSQVVKSTR 498 >gi|333990451|ref|YP_004523065.1| transmembrane protein [Mycobacterium sp. JDM601] gi|333486419|gb|AEF35811.1| transmembrane protein [Mycobacterium sp. JDM601] Length=522 Score = 494 bits (1271), Expect = 2e-137, Method: Compositional matrix adjust. Identities = 264/508 (52%), Positives = 336/508 (67%), Gaps = 8/508 (1%) Query 54 RMRGRLLDPLAIAVLAAVISGAWASRPSLWFDEGATISASASRTLPELWSLLGHIDAVHG 113 R GR D + IAV+A +ISG ASRPSLWFDE ATISAS R+LPELW LL HIDAVHG Sbjct 18 RRLGRPPDAVLIAVVATLISGIGASRPSLWFDESATISASTHRSLPELWQLLTHIDAVHG 77 Query 114 LYYLLMHGWFAIFPPTELWSRLPSCLAIGAAAAGVVVFAKQFSGRTTAVCAGAVFAILPR 173 LYYL MHGW A+FP TE W+R PSCLA+G AAGVVV ++F+G +VCAG ++A+LPR Sbjct 78 LYYLFMHGWLAVFPATEFWARAPSCLAVGTGAAGVVVLCRRFAGWQVSVCAGVLYAVLPR 137 Query 174 VTWAGIEARSSALSVAAAVWLTVLLVAAVRCNTQRRWLLYALVLMLSILVSINLALLVPA 233 VTWAG+EAR A + A+AVWLTVL V+A R NT W Y ++ S L++ L+V Sbjct 138 VTWAGVEARPYAFAAASAVWLTVLWVSAARRNTPALWPGYGAAVVASTLLNTFTVLMVAV 197 Query 234 YATMVPLLASGKSRKSPVIWWTVVTAAALGAMTPFILFAHGQVWQVGWIAGLNRNIILDV 293 +A + +S K + AL + PF+ F+ Q+WQV WI +N + ++++ Sbjct 198 HAVGLRACGCDRSVKRR---FAGAAGIALAVLAPFLWFSRQQIWQVAWIRPVNAHTVIEI 254 Query 294 IHRQYFDHSVPFAILAGLIVAAGIAAHLAGAR-GPGGDTHRLVLVSAAWIVVPTAVVLIY 352 +Q+FD+SVPFAI A L++A A AG R P G+ +LV + AW+V+PT + Y Sbjct 255 AQQQFFDNSVPFAISAWLLIAGAAVAVRAGIRPAPAGELRQLVSLCVAWLVIPTVATVAY 314 Query 353 SATVEPIYYPRYLILTAPAAAVILA----VCVVTIARKPWLIAGVVFLLAAAAFPNYFFT 408 S V+P+YYPRYLI TAPA A+ LA + V+T+AR I G + +L AA PNY Sbjct 315 SVMVKPVYYPRYLISTAPAMAITLALALNIAVITLARPRRAIIGALTVLIIAAAPNYVAN 374 Query 409 QRGPYAKEGWDYSQVADVISAHAKPGDCLLVDNTAGWRPGPIRALLATRPAAFRSLIDVE 468 QR Y KEGWDYS VADVI AHA+PGDCLL+DNT W PGPIRAL A R F L D Sbjct 375 QRDRYTKEGWDYSAVADVIDAHARPGDCLLIDNTTRWLPGPIRALPAGRAETFAKLRDPG 434 Query 469 RGTYGPKVGTLWDGHVAVWLTTAKIDKCPTLWTIANRDKSLPDHQVGEMLSPGTGFGRTP 528 RG + ++G LWDGH+AVW T ++ CPT+WTI + D+SLP HQV L GT F RTP Sbjct 435 RGPHRQQLGRLWDGHLAVWALTDQLAGCPTIWTITDHDRSLPAHQVAVKLPSGTRFARTP 494 Query 529 VYRFPSYLGFRIVERWQFHYSQVVKSTR 556 + LGF +VERWQF +SQV+K+TR Sbjct 495 DGQVLRQLGFHVVERWQFTFSQVIKATR 522 >gi|254821948|ref|ZP_05226949.1| hypothetical protein MintA_18592 [Mycobacterium intracellulare ATCC 13950] Length=535 Score = 439 bits (1129), Expect = 7e-121, Method: Compositional matrix adjust. Identities = 247/497 (50%), Positives = 326/497 (66%), Gaps = 3/497 (0%) Query 60 LDPLAIAVLAAVISGAWASRPSLWFDEGATISASASRTLPELWSLLGHIDAVHGLYYLLM 119 LDPL +A LA +S A A+RPS W+DE ATISAS SR+L ++W +LG++DAVHGLYYLLM Sbjct 42 LDPLLVAALAVAVSMAGAARPSFWYDEAATISASYSRSLAQMWHMLGNVDAVHGLYYLLM 101 Query 120 HGWFAIFPPTELWSRLPSCLAIGAAAAGVVVFAKQFSGRTTAVCAGAVFAILPRVTWAGI 179 HGWF +FP TE W+R PS LA G AAAGVVV KQFS RT A+ +G AILPR TWAGI Sbjct 102 HGWFQVFPATEFWTRAPSGLAAGGAAAGVVVLGKQFSSRTVAIASGTFCAILPRTTWAGI 161 Query 180 EARSSALSVAAAVWLTVLLVAAVRCNTQRRWLLYALVLMLSILVSINLALLVPAYATMVP 239 EAR ALS+ AAVWLTVLLV A R +T+R WL Y + L LSI++ +ALL+ AY V Sbjct 162 EARPYALSMMAAVWLTVLLVHAARRDTRRLWLGYGVALALSIVLDAYIALLLGAYVVFVV 221 Query 240 LLASGKSRKSPVIWWTVVTAAALGAMTPFILFAHGQVWQVGWIAGLNRNIILDVIHRQYF 299 + G++ + + + +A A+GA+ PF+L GQ Q+ W+A + I DV+ +QYF Sbjct 222 VFHRGRTVLAR---FAIASAVAVGAVLPFLLTVAGQAHQISWVAPIGHRTIEDVVMQQYF 278 Query 300 DHSVPFAILAGLIVAAGIAAHLAGARGPGGDTHRLVLVSAAWIVVPTAVVLIYSATVEPI 359 + S PFAILA L++ A I L+G+ +L++++A W+ +PTA +L YS V I Sbjct 279 ERSPPFAILAALLMCAAIVLWLSGSAWLAPSERQLLVLAAGWLAIPTAAILTYSVLVHSI 338 Query 360 YYPRYLILTAPAAAVILAVCVVTIARKPWLIAGVVFLLAAAAFPNYFFTQRGPYAKEGWD 419 Y PRYL TAPA A+IL VC +A +PW+ A +V L A AA PNY QR PYAK G D Sbjct 339 YTPRYLSFTAPAMALILGVCGGAVAARPWVTAALVGLFAVAAAPNYVRAQRNPYAKYGMD 398 Query 420 YSQVADVISAHAKPGDCLLVDNTAGWRPGPIRALLATRPAAFRSLIDVERGTYGPKVGTL 479 YSQVAD+I+A A PGDCLLV++T + P P+R LLA RP A+R L+D+ + Sbjct 399 YSQVADLITARAAPGDCLLVNDTVTFMPAPMRPLLAARPDAYRKLVDLTLWQRATDRNDV 458 Query 480 WDGHVAVWLTTAKIDKCPTLWTIANRDKSLPDHQVGEMLSPGTGFGRTPVYRFPSYLGFR 539 +D ++ + + C +W I D S P H+ G L PG +G TP + P LGFR Sbjct 459 FDTNLIPEVVAKPLSHCGVVWIITQADPSQPAHERGAALPPGPRYGPTPAFAVPHDLGFR 518 Query 540 IVERWQFHYSQVVKSTR 556 +VERWQF+ QV+K+T+ Sbjct 519 LVERWQFNLVQVLKATK 535 >gi|336460234|gb|EGO39137.1| putative membrane protein [Mycobacterium avium subsp. paratuberculosis S397] Length=506 Score = 436 bits (1122), Expect = 4e-120, Method: Compositional matrix adjust. Identities = 247/498 (50%), Positives = 327/498 (66%), Gaps = 5/498 (1%) Query 60 LDPLAIAVLAAVISGAWASRPSLWFDEGATISASASRTLPELWSLLGHIDAVHGLYYLLM 119 LDP +A LAA +S A A+RPS W+DE ATISAS SR+L ++W +LG++DAVHGLYYLLM Sbjct 13 LDPWIVAALAAAVSLAGAARPSFWYDEAATISASYSRSLTQMWHMLGNVDAVHGLYYLLM 72 Query 120 HGWFAIFPPTELWSRLPSCLAIGAAAAGVVVFAKQFSGRTTAVCAGAVFAILPRVTWAGI 179 HGWF + PPTE WSR PS LA+GAAAAGVVV +QFS RT AV +G A+LPR TWAG+ Sbjct 73 HGWFRLVPPTEFWSRAPSGLAVGAAAAGVVVLGRQFSSRTVAVVSGVFCAVLPRTTWAGV 132 Query 180 EARSSALSVAAAVWLTVLLVAAVRCNTQRRWLLYALVLMLSILVSINLALLVPAYATMVP 239 EAR ALS+ AAVWL+VLLV A R ++ WL + L L+ S+L+ +ALL+ AYA V Sbjct 133 EARPYALSMMAAVWLSVLLVFAARRQSRWPWLCFGLALVCSVLLDAYIALLLAAYAVFVG 192 Query 240 LLASGKSRKSPVIW-WTVVTAAALGAMTPFILFAHGQVWQVGWIAGLNRNIILDVIHRQY 298 + R V+W + + +A A+G + PF+L GQ Q+ W+A + + DV+ +QY Sbjct 193 VCC----RTRTVLWRFGISSAVAVGVLLPFLLTVAGQAHQISWVASIGHRTVEDVVMQQY 248 Query 299 FDHSVPFAILAGLIVAAGIAAHLAGARGPGGDTHRLVLVSAAWIVVPTAVVLIYSATVEP 358 F+ S PFA+L+ L++ A IA L+ + PG +L++++ W+ +PTA ++ YSA V P Sbjct 249 FERSPPFAVLSALLICAAIALWLSRSAPPGPSERQLLVLATCWVGIPTAAIVAYSALVHP 308 Query 359 IYYPRYLILTAPAAAVILAVCVVTIARKPWLIAGVVFLLAAAAFPNYFFTQRGPYAKEGW 418 IY PRYL TAPA A+IL VC IA KPW+ VV + A AA PNY QR PYAK G Sbjct 309 IYTPRYLCFTAPAMALILGVCSAAIAAKPWVTTAVVGVFAIAAVPNYVRAQRNPYAKYGM 368 Query 419 DYSQVADVISAHAKPGDCLLVDNTAGWRPGPIRALLATRPAAFRSLIDVERGTYGPKVGT 478 DYSQVAD+I+A A PGDCLLV++T + P P+R LLA RP A+R LID+ Sbjct 369 DYSQVADLITAKAAPGDCLLVNDTVTFMPAPMRPLLAARPDAYRKLIDLTLWQRAVDRND 428 Query 479 LWDGHVAVWLTTAKIDKCPTLWTIANRDKSLPDHQVGEMLSPGTGFGRTPVYRFPSYLGF 538 ++D ++ + + C LW I D S P HQ G L PG +G TP + P LGF Sbjct 429 VFDTNLIPEVVAGPLSHCAVLWIITQADPSEPAHQQGPALPPGPVYGATPAFAVPHDLGF 488 Query 539 RIVERWQFHYSQVVKSTR 556 R+VERWQF+ QV ++T+ Sbjct 489 RLVERWQFNLVQVFEATK 506 >gi|41409903|ref|NP_962739.1| hypothetical protein MAP3805c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398736|gb|AAS06355.1| hypothetical protein MAP_3805c [Mycobacterium avium subsp. paratuberculosis K-10] Length=541 Score = 436 bits (1120), Expect = 6e-120, Method: Compositional matrix adjust. Identities = 247/498 (50%), Positives = 327/498 (66%), Gaps = 5/498 (1%) Query 60 LDPLAIAVLAAVISGAWASRPSLWFDEGATISASASRTLPELWSLLGHIDAVHGLYYLLM 119 LDP +A LAA +S A A+RPS W+DE ATISAS SR+L ++W +LG++DAVHGLYYLLM Sbjct 48 LDPWIVAALAAAVSLAGAARPSFWYDEAATISASYSRSLTQMWHMLGNVDAVHGLYYLLM 107 Query 120 HGWFAIFPPTELWSRLPSCLAIGAAAAGVVVFAKQFSGRTTAVCAGAVFAILPRVTWAGI 179 HGWF + PPTE WSR PS LA+GAAAAGVVV +QFS RT AV +G A+LPR TWAG+ Sbjct 108 HGWFRLVPPTEFWSRAPSGLAVGAAAAGVVVLGRQFSSRTVAVVSGVFCAVLPRTTWAGV 167 Query 180 EARSSALSVAAAVWLTVLLVAAVRCNTQRRWLLYALVLMLSILVSINLALLVPAYATMVP 239 EAR ALS+ AAVWL+VLLV A R ++ WL + L L+ S+L+ +ALL+ AYA V Sbjct 168 EARPYALSMMAAVWLSVLLVFAARRQSRWPWLCFGLALVCSVLLDAYIALLLAAYAVFVG 227 Query 240 LLASGKSRKSPVIW-WTVVTAAALGAMTPFILFAHGQVWQVGWIAGLNRNIILDVIHRQY 298 + R V+W + + +A A+G + PF+L GQ Q+ W+A + + DV+ +QY Sbjct 228 VCC----RTRTVLWRFGISSAVAVGVLLPFLLTVAGQAHQISWVASIGHRTVEDVVMQQY 283 Query 299 FDHSVPFAILAGLIVAAGIAAHLAGARGPGGDTHRLVLVSAAWIVVPTAVVLIYSATVEP 358 F+ S PFA+L+ L++ A IA L+ + PG +L++++ W+ +PTA ++ YSA V P Sbjct 284 FERSPPFAVLSALLICAAIALWLSRSAPPGPSERQLLVLATCWVGIPTAAIVAYSALVHP 343 Query 359 IYYPRYLILTAPAAAVILAVCVVTIARKPWLIAGVVFLLAAAAFPNYFFTQRGPYAKEGW 418 IY PRYL TAPA A+IL VC IA KPW+ VV + A AA PNY QR PYAK G Sbjct 344 IYTPRYLCFTAPAMALILGVCSAAIAAKPWVTTAVVGVFAIAAVPNYVRAQRNPYAKYGM 403 Query 419 DYSQVADVISAHAKPGDCLLVDNTAGWRPGPIRALLATRPAAFRSLIDVERGTYGPKVGT 478 DYSQVAD+I+A A PGDCLLV++T + P P+R LLA RP A+R LID+ Sbjct 404 DYSQVADLITAKAAPGDCLLVNDTVTFMPAPMRPLLAARPDAYRKLIDLTLWQRAVDRND 463 Query 479 LWDGHVAVWLTTAKIDKCPTLWTIANRDKSLPDHQVGEMLSPGTGFGRTPVYRFPSYLGF 538 ++D ++ + + C LW I D S P HQ G L PG +G TP + P LGF Sbjct 464 VFDTNLIPEVVAGPLSHCAVLWIITQADPSEPAHQQGPALPPGPVYGATPAFAVPHDLGF 523 Query 539 RIVERWQFHYSQVVKSTR 556 R+VERWQF+ QV ++T+ Sbjct 524 RLVERWQFNLVQVFEATK 541 >gi|254777280|ref|ZP_05218796.1| hypothetical protein MaviaA2_21786 [Mycobacterium avium subsp. avium ATCC 25291] Length=506 Score = 430 bits (1105), Expect = 4e-118, Method: Compositional matrix adjust. Identities = 245/498 (50%), Positives = 325/498 (66%), Gaps = 5/498 (1%) Query 60 LDPLAIAVLAAVISGAWASRPSLWFDEGATISASASRTLPELWSLLGHIDAVHGLYYLLM 119 LDP +A LAA +S A A+RPS W+DE ATISAS SR+L ++W +LG++DAVHGLYYLLM Sbjct 13 LDPWIVAALAAAVSLAGAARPSFWYDEAATISASYSRSLTQMWHMLGNVDAVHGLYYLLM 72 Query 120 HGWFAIFPPTELWSRLPSCLAIGAAAAGVVVFAKQFSGRTTAVCAGAVFAILPRVTWAGI 179 HGWF + PPTE WSR PS LA+GAAAAGVVV +QFS RT AV +G A+LPR TWAG+ Sbjct 73 HGWFRLVPPTEFWSRAPSGLAVGAAAAGVVVLGRQFSSRTVAVASGVFCAVLPRTTWAGV 132 Query 180 EARSSALSVAAAVWLTVLLVAAVRCNTQRRWLLYALVLMLSILVSINLALLVPAYATMVP 239 EAR ALS+ AAVWL+ LLV A R ++ WL + L L+ S+L+ +ALL+ AYA V Sbjct 133 EARPYALSMMAAVWLSALLVFAARRQSRWPWLCFGLALVCSVLLDAYIALLLAAYAVFVG 192 Query 240 LLASGKSRKSPVIW-WTVVTAAALGAMTPFILFAHGQVWQVGWIAGLNRNIILDVIHRQY 298 + ++ V+W + + +A A+ + PF+L GQ Q+ W+A + I DV+ +QY Sbjct 193 VCCRSRT----VLWRFGISSAVAVVMLLPFLLTVAGQAHQISWVAAIGHRTIEDVVMQQY 248 Query 299 FDHSVPFAILAGLIVAAGIAAHLAGARGPGGDTHRLVLVSAAWIVVPTAVVLIYSATVEP 358 F+ S PFA+L+ L++ A IA L+ + G +L++++ W+ +PTA ++ YSA V P Sbjct 249 FERSPPFAVLSALLICAAIALWLSRSAPLGPSERQLLVLATCWVGIPTAAIVAYSALVHP 308 Query 359 IYYPRYLILTAPAAAVILAVCVVTIARKPWLIAGVVFLLAAAAFPNYFFTQRGPYAKEGW 418 IY PRYL TAPA A+IL VC IA KPW+ VV + A AA PNY QR PYAK G Sbjct 309 IYTPRYLCFTAPAMALILGVCSAAIAAKPWVTTAVVGVFAIAAAPNYIRAQRNPYAKYGM 368 Query 419 DYSQVADVISAHAKPGDCLLVDNTAGWRPGPIRALLATRPAAFRSLIDVERGTYGPKVGT 478 DYSQVAD+I+A A PGDCLLV++T + P P+R LLA RP A+R LID+ Sbjct 369 DYSQVADLITAKAAPGDCLLVNDTVTFMPAPMRPLLAARPDAYRKLIDLTLWQRAVDRND 428 Query 479 LWDGHVAVWLTTAKIDKCPTLWTIANRDKSLPDHQVGEMLSPGTGFGRTPVYRFPSYLGF 538 ++D ++ + + C LW I D S P HQ G L PG +G TP + P LGF Sbjct 429 VFDTNLIPEVVAGPLSHCAVLWIITQADSSEPAHQQGPALPPGPVYGATPAFAVPHDLGF 488 Query 539 RIVERWQFHYSQVVKSTR 556 R+VERWQF+ QV ++TR Sbjct 489 RLVERWQFNLVQVFEATR 506 >gi|118465904|ref|YP_883967.1| hypothetical protein MAV_4843 [Mycobacterium avium 104] gi|118167191|gb|ABK68088.1| conserved hypothetical protein [Mycobacterium avium 104] Length=506 Score = 429 bits (1104), Expect = 5e-118, Method: Compositional matrix adjust. Identities = 246/498 (50%), Positives = 324/498 (66%), Gaps = 5/498 (1%) Query 60 LDPLAIAVLAAVISGAWASRPSLWFDEGATISASASRTLPELWSLLGHIDAVHGLYYLLM 119 LDP +A LAA +S A A+RPS W+DE ATISAS SR+L ++W +LG++DAVHGLYYLLM Sbjct 13 LDPWIVAALAAAVSLAGAARPSFWYDEAATISASYSRSLTQMWHMLGNVDAVHGLYYLLM 72 Query 120 HGWFAIFPPTELWSRLPSCLAIGAAAAGVVVFAKQFSGRTTAVCAGAVFAILPRVTWAGI 179 HGWF + PPTE WSR PS LA+GAAAAGVVV +QFS RT AV +G A+LPR TWAG+ Sbjct 73 HGWFRLVPPTEFWSRAPSGLAVGAAAAGVVVLGRQFSSRTVAVASGVFCAVLPRTTWAGV 132 Query 180 EARSSALSVAAAVWLTVLLVAAVRCNTQRRWLLYALVLMLSILVSINLALLVPAYATMVP 239 EAR ALS+ AAVWL+ LLV A R ++ WL + L L+ S+L+ +ALL+ AYA V Sbjct 133 EARPYALSMMAAVWLSALLVFAARRQSRWPWLCFGLALVCSVLLDAYIALLLAAYAVFVG 192 Query 240 LLASGKSRKSPVIW-WTVVTAAALGAMTPFILFAHGQVWQVGWIAGLNRNIILDVIHRQY 298 + R V+W + + + A+G + PF+L GQ Q+ W+A + I DV+ +QY Sbjct 193 VCC----RTRTVLWRFGISSVVAVGVLLPFLLTVAGQAHQISWVAPIGHRTIEDVVMQQY 248 Query 299 FDHSVPFAILAGLIVAAGIAAHLAGARGPGGDTHRLVLVSAAWIVVPTAVVLIYSATVEP 358 F+ S PFA+L+ L++ A IA L+ + G +L++++ W+ +PTA ++ YSA V P Sbjct 249 FERSPPFAVLSALLICAAIALWLSRSAPLGPSERQLLVLATCWVGIPTAAIVAYSALVHP 308 Query 359 IYYPRYLILTAPAAAVILAVCVVTIARKPWLIAGVVFLLAAAAFPNYFFTQRGPYAKEGW 418 IY PRYL TAPA A+IL VC IA KPW+ VV + A AA PNY QR PYAK G Sbjct 309 IYTPRYLCFTAPAMALILGVCSAAIAAKPWVTTAVVGVFAIAAAPNYIRAQRNPYAKYGM 368 Query 419 DYSQVADVISAHAKPGDCLLVDNTAGWRPGPIRALLATRPAAFRSLIDVERGTYGPKVGT 478 DYSQVAD+I+A A PGDCLLV++T + P P+R LLA RP A+R LID+ Sbjct 369 DYSQVADLITAKAAPGDCLLVNDTVTFMPAPMRPLLAARPDAYRKLIDLTLWQRAVDRND 428 Query 479 LWDGHVAVWLTTAKIDKCPTLWTIANRDKSLPDHQVGEMLSPGTGFGRTPVYRFPSYLGF 538 ++D ++ + + C LW I D S P HQ G L PG +G TP + P LGF Sbjct 429 VFDTNLIPEVVAGPLSHCAVLWIITQADPSEPAHQQGPALPPGPVYGATPAFAVPHDLGF 488 Query 539 RIVERWQFHYSQVVKSTR 556 R+VERWQF+ QV ++TR Sbjct 489 RLVERWQFNLVQVFEATR 506 >gi|342859197|ref|ZP_08715851.1| hypothetical protein MCOL_09973 [Mycobacterium colombiense CECT 3035] gi|342133438|gb|EGT86641.1| hypothetical protein MCOL_09973 [Mycobacterium colombiense CECT 3035] Length=506 Score = 412 bits (1060), Expect = 6e-113, Method: Compositional matrix adjust. Identities = 245/497 (50%), Positives = 325/497 (66%), Gaps = 3/497 (0%) Query 60 LDPLAIAVLAAVISGAWASRPSLWFDEGATISASASRTLPELWSLLGHIDAVHGLYYLLM 119 LDP+ +A+ AA +S A A+RPS W+DE ATISA+ SR+L ++ +LG++DAVHGLYYLLM Sbjct 13 LDPVIVALAAAAVSMAGAARPSFWYDEAATISAAYSRSLAQMCHMLGNVDAVHGLYYLLM 72 Query 120 HGWFAIFPPTELWSRLPSCLAIGAAAAGVVVFAKQFSGRTTAVCAGAVFAILPRVTWAGI 179 HGWF +FPPTE WSR PS LA+G AAAGVVV KQFS RT AV +GA AILPR TWAGI Sbjct 73 HGWFQVFPPTEFWSRAPSALAVGGAAAGVVVLGKQFSSRTVAVASGAFCAILPRATWAGI 132 Query 180 EARSSALSVAAAVWLTVLLVAAVRCNTQRRWLLYALVLMLSILVSINLALLVPAYATMVP 239 EAR ALS+ AAVWLTVLLV A R +T WL YA+ L SI++ LALL+ AYA V Sbjct 133 EARPYALSMMAAVWLTVLLVYAARRDTGWLWLSYAVALACSIVLDAYLALLLAAYAVFVG 192 Query 240 LLASGKSRKSPVIWWTVVTAAALGAMTPFILFAHGQVWQVGWIAGLNRNIILDVIHRQYF 299 + +SR + V+ + + +AAA+GA+ PF++ GQ Q+ W+A + I DV+ +QYF Sbjct 193 VFY--RSRTA-VLGFVIASAAAVGALMPFLMTVAGQAHQISWVAPIGHRTIEDVLMQQYF 249 Query 300 DHSVPFAILAGLIVAAGIAAHLAGARGPGGDTHRLVLVSAAWIVVPTAVVLIYSATVEPI 359 + PFA+L+ L++ A I L+G L++++ W+ PTA ++ YSA V PI Sbjct 250 ERCPPFAVLSALLIGAAIVLWLSGPARLAESQRPLLVLATGWLAAPTAAIVTYSALVHPI 309 Query 360 YYPRYLILTAPAAAVILAVCVVTIARKPWLIAGVVFLLAAAAFPNYFFTQRGPYAKEGWD 419 Y PRYL TAPA A+IL VC +A KPW+ +V L A AA PNY QR PYAK G D Sbjct 310 YTPRYLCFTAPALALILGVCAGAVAAKPWVATAIVALFAVAAAPNYVRVQRNPYAKYGMD 369 Query 420 YSQVADVISAHAKPGDCLLVDNTAGWRPGPIRALLATRPAAFRSLIDVERGTYGPKVGTL 479 YSQVAD+I+A A PGDCLLV++T + P P+R LLA RP A+R L+D+ + Sbjct 370 YSQVADLITAKAAPGDCLLVNDTVTFMPAPMRPLLAARPDAYRKLVDLTLWQKATDRNDV 429 Query 480 WDGHVAVWLTTAKIDKCPTLWTIANRDKSLPDHQVGEMLSPGTGFGRTPVYRFPSYLGFR 539 +D ++ + + +C +W I D S P H+ G L PG + + + P LGFR Sbjct 430 FDTNLIPEVVARPLSQCGVVWIITQADPSQPAHEQGTALPPGPVYWASTAFAVPHDLGFR 489 Query 540 IVERWQFHYSQVVKSTR 556 +VERWQF+ QV+K+ R Sbjct 490 LVERWQFNLVQVLKAER 506 >gi|296167689|ref|ZP_06849935.1| transmembrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897102|gb|EFG76715.1| transmembrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=505 Score = 412 bits (1060), Expect = 7e-113, Method: Compositional matrix adjust. Identities = 241/497 (49%), Positives = 318/497 (64%), Gaps = 3/497 (0%) Query 60 LDPLAIAVLAAVISGAWASRPSLWFDEGATISASASRTLPELWSLLGHIDAVHGLYYLLM 119 LDPL + LA +S A RPS W+DE ATISA+ SR+L +LW +L ++DAVHGLYYLLM Sbjct 12 LDPLLVGGLAVAVSLGGAGRPSFWYDEAATISAAYSRSLAQLWRMLANVDAVHGLYYLLM 71 Query 120 HGWFAIFPPTELWSRLPSCLAIGAAAAGVVVFAKQFSGRTTAVCAGAVFAILPRVTWAGI 179 H WF FPPTE +SR PS LAIG AAAGVVV QFS R AV +G AILPR TWAGI Sbjct 72 HAWFQAFPPTEFFSRAPSGLAIGGAAAGVVVLGGQFSTRAVAVASGVFCAILPRSTWAGI 131 Query 180 EARSSALSVAAAVWLTVLLVAAVRCNTQRRWLLYALVLMLSILVSINLALLVPAYATMVP 239 EAR ALS+ AAVWLTVLLV A R +T R W Y + L+LSI + + LALLV + T Sbjct 132 EARPYALSMMAAVWLTVLLVHAARRDTGRLWAAYGVALVLSIALDVYLALLVAVHLT--- 188 Query 240 LLASGKSRKSPVIWWTVVTAAALGAMTPFILFAHGQVWQVGWIAGLNRNIILDVIHRQYF 299 L+ + ++ ++ + V + A+GAM PF+L GQ Q+ WIA + R + DV +QYF Sbjct 189 LIVVSRCARTVLLRFAVTSGVAVGAMAPFLLTVAGQAHQIAWIAPIGRRTLEDVAVQQYF 248 Query 300 DHSVPFAILAGLIVAAGIAAHLAGARGPGGDTHRLVLVSAAWIVVPTAVVLIYSATVEPI 359 + PFA+L+ L++AA +A+ L+ + L+ ++ AW+ +PTA +L+YSA V I Sbjct 249 ERCPPFAVLSALVIAAAVASWLSKSTPLAPADRHLLALAVAWLALPTAAILLYSALVHSI 308 Query 360 YYPRYLILTAPAAAVILAVCVVTIARKPWLIAGVVFLLAAAAFPNYFFTQRGPYAKEGWD 419 Y PRYL T P A+IL VC T+ +PWL A +V L A AA PNY QR PYAK G D Sbjct 309 YTPRYLSFTVPGMALILGVCAATVTARPWLTAALVALFAVAAAPNYVRVQRNPYAKYGMD 368 Query 420 YSQVADVISAHAKPGDCLLVDNTAGWRPGPIRALLATRPAAFRSLIDVERGTYGPKVGTL 479 YSQVAD++SA A PGDCLLV++T + P P+R L+A RP A+R LID+ + Sbjct 369 YSQVADLVSAKAAPGDCLLVNDTVTFMPAPMRPLMAARPDAYRKLIDLTLWQRATDRNDV 428 Query 480 WDGHVAVWLTTAKIDKCPTLWTIANRDKSLPDHQVGEMLSPGTGFGRTPVYRFPSYLGFR 539 +D ++ + + +C +W I D S P H+ G + PG +G TP + P LGFR Sbjct 429 FDTNLIPEVVAQPLSRCGVVWIITQADPSQPAHEWGPAIPPGPVYGPTPAFAVPHDLGFR 488 Query 540 IVERWQFHYSQVVKSTR 556 +VERWQF+ QV+K+ R Sbjct 489 LVERWQFNLVQVLKAQR 505 >gi|145221072|ref|YP_001131750.1| hypothetical protein Mflv_0468 [Mycobacterium gilvum PYR-GCK] gi|315441957|ref|YP_004074836.1| hypothetical protein Mspyr1_02870 [Mycobacterium sp. Spyr1] gi|145213558|gb|ABP42962.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK] gi|315260260|gb|ADT97001.1| hypothetical protein Mspyr1_02870 [Mycobacterium sp. Spyr1] Length=526 Score = 281 bits (718), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 204/529 (39%), Positives = 273/529 (52%), Gaps = 60/529 (11%) Query 61 DPLAIAVLAAVISGAWASRPSLWFDEGATISASASRTLPELWSLLGHIDAVHGLYYLLMH 120 D + + VLA + A A RPSLW DE T+SA A+R + LW+L+ H+DAVHG YYLL+ Sbjct 16 DAVVVGVLAFALGVAAAGRPSLWVDEAGTLSA-ATRPVDALWTLVHHVDAVHGFYYLLLR 74 Query 121 GWFAIFPPTELWSRLPSCLAIGAAAAGVVVFAKQFSGRTTAVCAGAVFAILPRVTWAGIE 180 GWF I P TE W+R+PS L +G AAAG V + SGR + AG VFA+LPR TWA +E Sbjct 75 GWFEIVPVTEFWARVPSALMVGVAAAGTCVLGSRLSGRKVGIAAGVVFAVLPRTTWAAVE 134 Query 181 ARSSALSVAAAVWLTVLLVAAVRCNTQRRWLLYALVLMLSILVSINLALLVPAYATMVPL 240 AR ALS+A AVWLTVL VAAVR +R WL Y L+ ++ V++ + L++ +A M Sbjct 135 ARPYALSMACAVWLTVLFVAAVRRGGRRWWLGYGAALVGAVTVNVMVVLILAGHAAM--- 191 Query 241 LASGKSRKSPVIWWTVVTAAALGAMTPFILFAHGQVWQVGWIAGLNRNIILDVIHRQYF- 299 LA+ + + V W V A A+ P + Q Q+ WI + + + QYF Sbjct 192 LAATRPDRRTVRAWLVTVVVASVALIPLFVVLLSQQAQIAWIWPVGPVTLGQIAGEQYFP 251 Query 300 ---DHSV--------------------PFAILAGLIVAAGIAA---------HLAGARGP 327 SV +A +A LIV I A H A P Sbjct 252 SVYSDSVRAVGPDQQQFSAEQLRVAMSAWARVAPLIVVIVIVAALAVRARRRHGALIENP 311 Query 328 GGDTHRLVLVSAAWIVVPTAVVLIYSATVEPIYYPRYLILTAPAAAVILAVCVVTIARKP 387 G T LVL + AWIVVPT V+L YS V P+Y P YL T PA A+++ +CVVT+ R Sbjct 312 SG-TRVLVLGAVAWIVVPTVVLLGYSVLVRPLYQPHYLTFTTPALALLIGLCVVTLCRDD 370 Query 388 W-LIAGVVFLLAAAAFPNYFFTQRGPYAKEGWDYSQVADVISAHAKPGDCLLVDN-TAGW 445 + + +LA AA PNY QRGPYAK G DYSQVA++++ + P DC++VD+ TA Sbjct 371 TRRLTATLAVLAVAAAPNY-LAQRGPYAKYGSDYSQVAELLARESGPRDCVVVDDRTAPS 429 Query 446 RPGPIRALLATRPAAFRSLIDVERGTYGPKVGTLWDGHVAVWLTTAKIDKCPTLWTIANR 505 P I P A R L G P+ L+ + + + C LWTI + Sbjct 430 VPHAIEGARRAHPVAARDL-----GLAPPERTALFSARDPLGVRADDLRTCAVLWTIGDA 484 Query 506 DKSLPDHQVGEMLSPGTGFGRTPVYRFPSYLGFRIVERWQFHYSQVVKS 554 P PV R GF ERW+F+ ++VV+S Sbjct 485 APGSP--------------ADAPVDRVARAQGFVPAERWRFNQTEVVRS 519 >gi|229492507|ref|ZP_04386310.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] gi|229320493|gb|EEN86311.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] Length=522 Score = 263 bits (671), Expect = 8e-68, Method: Compositional matrix adjust. Identities = 176/511 (35%), Positives = 269/511 (53%), Gaps = 20/511 (3%) Query 62 PLAIAVLAAVISGAWASRPSLWFDEGATISASASRTLPELWSLLGHIDAVHGLYYLLMHG 121 P + + A V+ AW+ RPS W+DE AT+S A R+L + LGH+DAVHGLYY+L+H Sbjct 15 PALLGLTATVVGVAWSGRPSFWWDEAATVSM-ADRSLRSTLATLGHVDAVHGLYYVLIHW 73 Query 122 WFAIFPPTELWSRLPSCLAIGAAAAGVVVFAKQFSGRTTAVCAGAVFAILPRVTWAGIEA 181 WF +F +E +R PS LA+G A A +V A+ F G V G F +LPRVTWA EA Sbjct 74 WFQVFGVSEFSARAPSALAVGIATAALVSLARMFGGTRLGVIVGVTFMVLPRVTWAATEA 133 Query 182 RSSALSVAAAVWLTVLLVAAVRCNTQRRWLLYALVLMLSILVSINLALLVPAYATMVPL- 240 RS A+ +A + ++LV ++R + + W+LY ++ +S+ + + A+L+ +A +V Sbjct 134 RSYAMVLALSTVTMLVLVCSLRTSKRAWWILYGVLAAVSVALFLYSAVLLLVHAVIVVFG 193 Query 241 -----LASGKSRKSPVIWWTVVTAAALGAMTPFILFAHGQVWQVGWIAGLNRNIILDVIH 295 A K + + + +A+A+ ++P I + GQ QV WI L+R+I + Sbjct 194 AKVIPDADSKRNRFNGLCFVGASASAVLLVSPLIALSLGQSRQVSWIPPLDRHIFTTIAV 253 Query 296 RQYFDHSVPFAILAGLIVAAGIAAH-LAGARGPGGDTHRLVLVSAAWIVVPTAVVLIYSA 354 Q+F S FA++AG+IV +GIA + A +R GD V+ WI+VP A+ L+YS Sbjct 254 DQWFLSSPLFAVVAGIIVLSGIAGYFFAPSRWTVGD-RSASTVALVWILVPMALFLMYSV 312 Query 355 TVEPIYYPRYLILTAPAAAVILAVCVVTIARKPWLIAGVVFLLAAAAFPNYFFTQRGPYA 414 + IY RY+I TAP A++L V + + L + V LLAAA+ P Y +QR P+ Sbjct 313 VLGNIYVDRYVIFTAPGVALLLGVMISRLTSSWVLASAAVILLAAASLPAY-VSQREPWG 371 Query 415 KE-GWDYSQVADVISAHAKPGDCLLVDNTAGWRPGPIRALLATRPAAFRSLIDVERGTYG 473 K G DYS AD + A+ GDC+ W P + A+ RP + + L D+ Sbjct 372 KSGGMDYSTAADFLKANGNAGDCVAFQPVVSWAPSSLHAVAEARPDSIKGLRDIGLEHDA 431 Query 474 PKVGTLWDGHVAVWLTTAKIDKCPTLWTIANRDKS-----LPDHQVGEMLSPGTGFGRTP 528 + LWD +V T + C T+W + + ++ L V P F T Sbjct 432 NSIDELWDSEYSVDETAERAQGCQTVWVVTDGERQSYEAILHTANVVWNFEP-FHFIDTE 490 Query 529 VYRFPSYLGFRIVERWQFHYSQVVK---STR 556 ++ S GF + H+ Q+V+ STR Sbjct 491 LFTQLSARGFVVETATPLHHLQIVQMVPSTR 521 >gi|226363383|ref|YP_002781165.1| mannosyltransferase [Rhodococcus opacus B4] gi|226241872|dbj|BAH52220.1| putative mannosyltransferase [Rhodococcus opacus B4] Length=504 Score = 244 bits (622), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 193/506 (39%), Positives = 270/506 (54%), Gaps = 16/506 (3%) Query 56 RGRLLDPLAIAVLAAVISGAWASRPSLWFDEGATISASASRTLPELWSLLGHIDAVHGLY 115 RG L D + L ++ AW+ RPS W+DE AT+ +S R+ P+L LLGHIDAVHGLY Sbjct 10 RGLLRDSSLVFALGVLLGAAWSWRPSFWYDEVATLYSS-QRSRPDLSHLLGHIDAVHGLY 68 Query 116 YLLMHGWFAIFPPTELWSRLPSCLAIGAAAAGVVVFAKQFSGRTTAVCAGAVFAILPRVT 175 Y+ M WFA+F +E SR PS LA+GAA AGVVV + R AV +G +F ILP VT Sbjct 69 YVAMRYWFAVFGASEFSSRFPSALAVGAAGAGVVVLGALIATRRVAVLSGLLFVILPSVT 128 Query 176 WAGIEARSSALSVAAAVWLTVLLVAAVRCNTQRRWLLYALVLMLSILVSINLALLVPAYA 235 WA EAR A + AAAVWLTV+L+ A+R W LYA+ L +SI++ + L LVPA+ Sbjct 129 WAAAEARGYAATAAAAVWLTVILLGALRLRRWWLWALYAVGLAVSIVLFVYLLTLVPAHL 188 Query 236 TMVPLLASGKSRKSPVIWWTVVTAAALGAMTPFILFAHGQVWQVGWIAGLNRNIILDVIH 295 + ++ + + W TAA L PF+ + QV WI L+ ++ V Sbjct 189 LTL---LLLRAARRSWLGWAAATAAGLVVAAPFVALVRREAVQVAWIPPLDGHLPRAVAE 245 Query 296 RQYFDHSVPFAILAGLIVAAGIAAHLAGARGPGGDTHRLVLVSAAWIVVPTAVVLIYSAT 355 Q+F + FA+L ++V AG A G R P ++ ++ WI VP A++L+YS Sbjct 246 YQWFVGAPWFAVLFAVLVVAGSVALARGRRLPA-----VLSIALPWIAVPMALLLVYSLL 300 Query 356 VEPIYYPRYLILTAPAAAVILAVCVVTIARKPWLIAGVVFLLAAAAFPNYFFTQRGPYAK 415 P+Y PRY T PA A+I +C+ +AR W A V+ + A AA P Y QR +AK Sbjct 301 RSPVYLPRYFTFTTPAVALIGGLCLAALARAWWQCAAVLAVFAVAASPAY-VAQREQWAK 359 Query 416 -EGWDYSQVADVISAHAKPGDCLLVDNTAGWRPGPIRALLATRPAAFRSLIDVERGTYGP 474 G D+S H +PGDC+L D A W P +R + RP +F D+ GT Sbjct 360 PSGMDFSTANVFAGQHLRPGDCVLFDKPA-WNPTSLRLVKDVRPESFDGTRDIGLGTTAA 418 Query 475 KVGTLWDGHVAVWLTTAKIDKCPTLWTIANRDKS---LPDHQVGEMLS-PGTGFGRTPVY 530 G+LWD VAV +D C +W + ++ + H E+ + P F T + Sbjct 419 SRGSLWDDEVAVPDLAGALDSCSVVWFFTDYERDSERIIRHTSNEVWTLPPYHFEDTEAF 478 Query 531 RFPSYLGFRIVERWQFHYSQVVKSTR 556 + G RI +R F+ +Q VK R Sbjct 479 AALTRSGLRIDDRVTFNVTQAVKLVR 504 >gi|111021093|ref|YP_704065.1| hypothetical protein RHA1_ro04110 [Rhodococcus jostii RHA1] gi|110820623|gb|ABG95907.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=507 Score = 226 bits (577), Expect = 6e-57, Method: Compositional matrix adjust. Identities = 200/507 (40%), Positives = 279/507 (56%), Gaps = 16/507 (3%) Query 55 MRGRLLDPLAIAVLAAVISGAWASRPSLWFDEGATISASASRTLPELWSLLGHIDAVHGL 114 +RG L D + + V+ AW+ RPS W+DE AT+ +S R+ P+L +LLGHIDAVHGL Sbjct 12 VRGLLRDSFLVFAVGVVLGAAWSWRPSFWYDEVATLYSS-QRSRPDLSNLLGHIDAVHGL 70 Query 115 YYLLMHGWFAIFPPTELWSRLPSCLAIGAAAAGVVVFAKQFSGRTTAVCAGAVFAILPRV 174 YY+ MH WFA+F +E +R PS LA GAA AGVVV S R AV +G +F ILP V Sbjct 71 YYVGMHYWFAMFGASEFSARFPSALAAGAAGAGVVVLGALISTRRVAVLSGILFVILPSV 130 Query 175 TWAGIEARSSALSVAAAVWLTVLLVAAVRCNTQRRWLLYALVLMLSILVSINLALLVPAY 234 TWA EAR A + AAAVWLTV+L+AA+R + W LYA L +SI++ + L LVPA+ Sbjct 131 TWAAAEARGYAATAAAAVWLTVILLAALRLRRRWLWALYAAGLAVSIVLFVYLITLVPAH 190 Query 235 ATMVPLLASGKSRKSPVIWWTVVTAAALGAMTPFILFAHGQVWQVGWIAGLNRNIILDVI 294 + LL + R+S + W + A A+ A L V QV WI L+ ++ V Sbjct 191 LLTILLLR--EVRRSWLGWASATAAGAVVAAPFVALVRRESV-QVAWIPPLDGHLPRAVA 247 Query 295 HRQYFDHSVPFAILAGLIVAAGIAAHLAGARGPGGDTHRLVLVSAAWIVVPTAVVLIYSA 354 Q+F + FA+L ++V AG+ A + G R P ++ V+ WI VP A +L YS Sbjct 248 EYQWFVGAPWFAMLFAVLVVAGVVALVRGRRVPP-----VLYVALPWIAVPMAALLAYSL 302 Query 355 TVEPIYYPRYLILTAPAAAVILAVCVVTIARKPWLIAGVVFLLAAAAFPNYFFTQRGPYA 414 P+Y PRY T PA A++ +C+ +ARK W A V+ + AA P+Y QR +A Sbjct 303 LRSPVYLPRYFTFTTPAVALVGGLCLAALARKWWESAAVLAVFVVAASPSY-LDQREQWA 361 Query 415 K-EGWDYSQVADVISAHAKPGDCLLVDNTAGWRPGPIRALLATRPAAFRSLIDVERGTYG 473 K G D+S V H +PGDC+L D A W P +R + RPAAF D+ GT Sbjct 362 KPSGMDFSTVNSFAGEHLRPGDCVLFDKPA-WNPTSLRLVKNVRPAAFDGTRDIGLGTTA 420 Query 474 PKVGTLWDGHVAVWLTTAKIDKCPTLWTIANRDKS---LPDHQVGEMLS-PGTGFGRTPV 529 G+LWD +AV +++ C +W + ++ + H E+ + P F T Sbjct 421 ASRGSLWDDELAVPDLAGQLESCSVVWFFTDYERDAERVIRHTSNEVWTLPPYHFEDTEA 480 Query 530 YRFPSYLGFRIVERWQFHYSQVVKSTR 556 + + G RI ER F+ +Q VK R Sbjct 481 FAALARSGLRIDERATFNVTQAVKLVR 507 >gi|170782862|ref|YP_001711196.1| putative integral membrane protein [Clavibacter michiganensis subsp. sepedonicus] gi|169157432|emb|CAQ02621.1| putative integral membrane protein [Clavibacter michiganensis subsp. sepedonicus] Length=568 Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 153/499 (31%), Positives = 230/499 (47%), Gaps = 64/499 (12%) Query 80 PSLWFDEGATISASASRTLPELWSLLGHIDAVHGLYYLLMHGWFAI--FPPTELWSRLPS 137 PS+W+DE AT+ SA+R +L LG +DAVHGLYY M WF + + PT L R PS Sbjct 64 PSVWYDEAATV-ISATRGWDDLLRELGTVDAVHGLYYAGMKVWFELVGYSPTSL--RFPS 120 Query 138 CLAIGAAAAGVVVFAKQFSGRTTAVCAGAVFAILPRVTWAGIEARSSALSVAAAVWLTVL 197 + IG AAAGVV+ + S R T + AG VF ++PR W G E RS AL AV LT++ Sbjct 121 AVFIGLAAAGVVLLTRTVSTRATGIVAGIVFVVIPRSAWMGTEGRSFALGTLIAVALTIV 180 Query 198 LV-----AAVRCNTQRR-WLLYALVLMLSILVSINLALLVPAYATMVP-LLAS---GKSR 247 LV A R Q R W LY L+ L + LALLV A+ ++ +AS G+ Sbjct 181 LVLAARRAGSRWQVQARWWALYGLLAWLGASTFVYLALLVGAHGVVILWAIASARVGRRS 240 Query 248 KSPVI----WWTVVTAAALGAMTPFILFAHGQVWQVGWIAGLNRNIILDVIHRQYFDHSV 303 + P++ W + + AA P + Q QVGWI + N + V+ Q F + Sbjct 241 RRPMVVSLLGWALSSIAAGLLSLPLVRVVTEQSGQVGWIDPIGPNTVTQVLSTQLFYQND 300 Query 304 PFAIL------------------------AGLIVAAGIAAHLAGARGPGGDTHRLVLVSA 339 FA++ A + G A A G + ++ ++ Sbjct 301 VFAVIAWVLALLGLALLVRRGIRLVRARRASTVEPEGGIAEFESAYLHAGWSPTILQLAV 360 Query 340 AWIVVPTAVVLIYSATVEPIYYPRYLILTAPAAAVILAVCVVTIARKPWLIAGVVFLLAA 399 W VPT +++ S + P+Y PRY+ TAPA A+++AV ++ + KP LIA V +L Sbjct 361 VWFAVPTLLLIGASTLMSPLYSPRYMAYTAPAFAMLMAVGILALKWKP-LIAAVTAVLVT 419 Query 400 AAFPNYFFTQRGPYAKEGWDYSQVADVIS---AHAKPGDCLLVDNTAGWRPGPIRA---- 452 + R K D++ +A ++S A P D T GP+R Sbjct 420 LSLMQ-LVHDRTTTVKADSDWAAIARIVSEERAQEAP------DTTDAVIFGPVRRHPKA 472 Query 453 ----LLATRPAAFRSLIDVERGTYGPKVGTLWDGHVAVWLTTAKIDKCPTLWTIANRDKS 508 + + P AFR + D+ T LW+ + +++ +W + + + Sbjct 473 TSRIVAYSYPDAFRGMDDILLRTPPGDTDGLWEETYPLADRVDEVEGADVVWLVTSDKQD 532 Query 509 LPDHQVGEMLSPGTGFGRT 527 + D V E L+P GF +T Sbjct 533 IRD-DVAEALTP-RGFAKT 549 >gi|148273547|ref|YP_001223109.1| hypothetical protein CMM_2364 [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147831477|emb|CAN02437.1| conserved membrane protein [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length=568 Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 154/500 (31%), Positives = 227/500 (46%), Gaps = 66/500 (13%) Query 80 PSLWFDEGATISASASRTLPELWSLLGHIDAVHGLYYLLMHGWFAI--FPPTELWSRLPS 137 PS+W+DE AT+ SA+R +L L +DAVHGLYY M WF + + PT L R PS Sbjct 64 PSVWYDEAATV-ISATRGWDDLLRELSTVDAVHGLYYAGMKVWFELVGYSPTSL--RFPS 120 Query 138 CLAIGAAAAGVVVFAKQFSGRTTAVCAGAVFAILPRVTWAGIEARSSALSVAAAVWLTVL 197 + IG AAAGVV+ + S R T + AG VF ++PR W G E RS AL AV LTV Sbjct 121 AVFIGLAAAGVVLLTRTISTRATGIVAGLVFVVIPRSAWMGTEGRSFALGTLIAVALTVA 180 Query 198 LV-----AAVRCNTQRR-WLLYALVLMLSILVSINLALLVPAYATMVP-LLAS---GKSR 247 V A R Q R W LY L+ L + LALLV A+ ++ +AS G+ Sbjct 181 FVLAARRAGSRWQVQARWWALYGLLAWLGASTFVYLALLVGAHGVVILWAIASARVGRRS 240 Query 248 KSPVI-----WWTVVTAAALGAMTPFILFAHGQVWQVGWIAGLNRNIILDVIHRQYFDHS 302 + P++ W + A L ++ P + Q QVGWI + N I V+ Q F + Sbjct 241 RRPMVVSLLGWASASIVAGLLSL-PLVRVVTEQSGQVGWIKPIGPNTITQVVSTQLFYQN 299 Query 303 VPF------------------------AILAGLIVAAGIAAHLAGARGPGGDTHRLVLVS 338 F A A + G A A G + L+ ++ Sbjct 300 DVFALLAWALALVGLALLVRRGIRLVRARRASRLEPEGALAEFESAYMHAGWSPTLLQLA 359 Query 339 AAWIVVPTAVVLIYSATVEPIYYPRYLILTAPAAAVILAVCVVTIARKPWLIAGVVFLLA 398 W VVPT +++ S + P+Y PRY+ TAPA A+++AV ++ + KP L+ V +L Sbjct 360 VVWFVVPTLLLIGASTLMSPLYSPRYMAYTAPAFAMLMAVGILALRWKP-LVGAVTAVLV 418 Query 399 AAAFPNYFFTQRGPYAKEGWDYSQVADVIS---AHAKPGDCLLVDNTAGWRPGPIRA--- 452 A + R K D++ +A +++ A PG V GP+R Sbjct 419 ALSVMQ-LVHDRTTTVKADSDWAAIARIVTEERAQEAPGTTEAVIF------GPVRRHPK 471 Query 453 -----LLATRPAAFRSLIDVERGTYGPKVGTLWDGHVAVWLTTAKIDKCPTLWTIANRDK 507 + + P AFR + D+ T LW+ + ++D +W + + + Sbjct 472 ATSRIVAYSYPDAFRGMDDILLRTPPGDTDGLWEETYPLADRVDEVDGADVVWLVTSDKQ 531 Query 508 SLPDHQVGEMLSPGTGFGRT 527 + D V E L+P GF +T Sbjct 532 DIRD-DVAEALTP-RGFAKT 549 >gi|296141770|ref|YP_003649013.1| mannosyltransferase [Tsukamurella paurometabola DSM 20162] gi|296029904|gb|ADG80674.1| putative mannosyltransferase [Tsukamurella paurometabola DSM 20162] Length=526 Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 173/517 (34%), Positives = 241/517 (47%), Gaps = 31/517 (5%) Query 58 RLLDPLAIAVLAAVISGAW-ASRPSLWFDEGATISASASRTLPELWSLLGHIDAVHGLYY 116 R PLA V A ++ W RPS+WFDE AT SA R+ ELW +LG IDAVHGLYY Sbjct 3 RFGPPLAF-VFAGILLSLWHGGRPSVWFDELATASA-IDRSPGELWGMLGTIDAVHGLYY 60 Query 117 LLMH--GWFAIFPPTELWSRLPSCLAIGAAAAGVVVFAKQFSGRTTAVCAGAVFAILPRV 174 ++ W P L R S L +GAA A V A++ G A+ AGA+ ILPR+ Sbjct 61 FVLKLFAWPVGMDPAAL--RTFSALGVGAAVAACYVLARRLGGTQLALFAGAIALILPRI 118 Query 175 TWAGIEARSSALSVAAAVWLTVLLVAAVRCNTQRRWLLYALVLMLSILVSINLALLVPAY 234 TWAG+EARS + +AAA + A R T+R W+ Y L L+ + + A L A Sbjct 119 TWAGVEARSYSWVIAAAALTLICAHRAARSGTRRDWIGYGAALALASALFLYSATLAAAM 178 Query 235 ATMVPLLASGKSRKSPVIWWTVVTAAALGAMTPFILFAHGQVWQVGWIAGLNRNIILDVI 294 V A R+ + + + A+ ++P ++ A Q QV W+ I +V Sbjct 179 LVAVAWAAPEGVRRVRLKQAAITSVIAIAVVSPVVILAATQRDQVSWLRWPGWMIFPNVA 238 Query 295 HRQYFDHSVPFAILA-GLIVAAGIAAHLAGARGPGGDTHRLVLVSAAWIVVPTAVVLIYS 353 Q+FDHS FA A L++AAG+ L RG D + A +VP AV+L+ S Sbjct 239 VDQWFDHSYLFAAAAWSLVIAAGV---LWWRRGVPSDLLVPLRCGVAAALVPLAVILLVS 295 Query 354 ATVEPIYYPRYLILTAPAAAVILAVCVVTI------ARKPWLIAGVVFLLAAAAFPNYFF 407 V P Y RY+ T P ++LAV T+ +R A +V +LA A P Y + Sbjct 296 PVV-PSYVGRYVSFTVPGVVLVLAVAAATVARVLPASRAS--GAALVAVLAVTAIPGYLW 352 Query 408 TQRGPYAKEGW-DYSQVADVISAHAKPGDCLLVDNTAGWRPGPIRALLATRPAAFRSLID 466 Q P +K G D++ A I +A+PGDC+ W +R P F L D Sbjct 353 -QHSPLSKPGGSDFTYAARYIRDNARPGDCVFFQVQPSWAWPSLRIAYDGLPGMFDGLTD 411 Query 467 VERGTYGPKVGTLWDGHVAV--WLTTAKIDKCPTLWTIANRDKSLPDH--QVGEM---LS 519 + + LWD V W A C W +A+ D++ D+ + G + Sbjct 412 MGNDGDRREQNKLWDKEKGVNQWAEWAA-KNCTAAWVLADADRADTDYRRENGNLWWTFR 470 Query 520 PGTGFGRTPVYRFPSYLGFRIVERWQFHYSQVVKSTR 556 P G T + Y G +V + QFH QVV R Sbjct 471 PFQFMG-TDMQVSLDYGGLAVVHQEQFHILQVVHLVR 506 >gi|329941809|ref|ZP_08291074.1| integral membrane protein [Streptomyces griseoaurantiacus M045] gi|329299526|gb|EGG43426.1| integral membrane protein [Streptomyces griseoaurantiacus M045] Length=495 Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 125/409 (31%), Positives = 194/409 (48%), Gaps = 43/409 (10%) Query 70 AVISGAWASR--PSLWFDEGATISASASRTLPELWSLLGHIDAVHGLYYLLMHGWFAIFP 127 A++ G W R S+W DE T A R L ++W H+D VH +YY +MHG F +F Sbjct 31 ALVLGLWGIRRQNSMWGDETVTYQL-ARRDLAQIWRTAEHVDLVHAVYYSVMHGLFGLFG 89 Query 128 PTELWSRLPSCLAIGAAAAGVVVFAKQFSGRTTAVCAGAVFAILPRVTWAGIEARSSALS 187 L RLPS LA+ AAA+GV + + +G + AG VF +LP+V E RS AL Sbjct 90 EGLLTLRLPSVLAMCAAASGVALLGLRLAGPRAGLSAGLVFTLLPQVQKYAQEGRSYALV 149 Query 188 VAAAVWLTVLLVAAVRCNTQRRWLLYALVLMLSILVSINLALLVPAYATMVPLLASGKSR 247 A W TV L+A + + RW++Y ++ + L+ L + A+ + L + Sbjct 150 CALVSWATVALLAGLAHRDRWRWVVYGATMLTACLLHEFAVLALAAHGATLLLARVPR-- 207 Query 248 KSPVIW-WTVVTAAALGAMTPFILFAHGQVWQVGWIAGLNRNIILDVIHRQYFDHSVPFA 306 PV+ W+V AA + + P +L + GQ QV WI G R ILD + P A Sbjct 208 --PVLRAWSVSAAAVVTGLLPLVLLSAGQSQQVAWINGPVR--ILDFL---------PLA 254 Query 307 ILAGLIVAAGIAAHLAGARGPGGDTHRLVLVSAAWIVVPTAVVLIYSATVEPIYYPRYLI 366 AG++ A + ARGP RL + A +VV ++L+ ++ V+P++ RY++ Sbjct 255 A-AGVVGAKVVPLR---ARGP----VRLAAL-AVPLVVLPCLLLLLASLVKPLFVDRYVL 305 Query 367 LTAPAAAVILAVCVVTIARKPW--------LIAGVVFLLAAAAFPNYFFTQRGPYAKEGW 418 A++L C+ + R+ W +A + L AA R P ++ Sbjct 306 YGNIGTALLLGACLSHLHRRWWSSRTPRTTAVAVLAALAVLAALVPASLALRTPESRSN- 364 Query 419 DYSQVADVISAHAKPGDCLLVDNTAGWRPGPIRALLATRPAAFRSLIDV 467 D + V I +PGD LL + P R+ + PA R++ D+ Sbjct 365 DVTAVGAAIRHEGRPGDGLL------YLPAQRRSWIGADPADTRAVTDL 407 >gi|297625240|ref|YP_003687003.1| hypothetical protein PFREUD_00430 [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296921005|emb|CBL55543.1| Hypothetical transmembrane protein [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length=563 Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 150/493 (31%), Positives = 207/493 (42%), Gaps = 92/493 (18%) Query 36 SASTLEQPAAAHVDELVARMRGRLL-----DPLAIAVLAAVIS--GAWASRPSLWFDEGA 88 SA+T PA H R+R RL+ + + VLAA++ G+W S W DE A Sbjct 46 SATTDPSPAPRH------RIRRRLIPLDGHGDIRLGVLAALLCMIGSWYV--STWLDESA 97 Query 89 TISASASRTLPELWSLLGHIDAVHGLYYLLMHGWFAIFPPTELWSRLPSCLAIGAAAAGV 148 T + S ++ L D V+ YY LMH W A+ RLPS LA+G A + Sbjct 98 T-AHIISYPPAQMNGLFTWTDLVYAPYYYLMHYWTALVGINPFTLRLPSVLAVGVGTAAM 156 Query 149 VVFAKQFSGRTTAVCAGAVFAILPRVTWAGIEARS---SALSVAAAVWLTVLLVAAVRCN 205 + R + A FA+LPRV GIEAR +A+ VA AVWL VL+ Sbjct 157 AATGRVLVARRGQLLYAACFALLPRVMAMGIEARPYAFAAMFVACAVWLVVLI-----GR 211 Query 206 TQRRWLLYALVLMLSILVSINLALLVPAYATMVPLLASGKSRKSPVIWWTVVTAAALGAM 265 W + L +++ V + ++P + L + ++R W A A G + Sbjct 212 RPTAWRVIGLTAAMALAVYAQMYAVLPVVGLTLVGLLTIRTRHR---WLVAAAAVAAGTL 268 Query 266 T-PFILFAHGQVWQVGWIAGLNRNIILDVIHRQYFDHS-------------------VPF 305 PF + A GQ+ QVGWIA L+ + +FDH+ VP Sbjct 269 CLPFGVAAVGQLRQVGWIADLSHD---------WFDHALVESWAASRTNVNVTATDLVPH 319 Query 306 AILAGLIVA-------------AGIAAHLAGARGPGGDTHRLVLVSAAWIVVP---TAVV 349 I + V +G AA AG R PG + W +VP T VV Sbjct 320 VIAVTMAVLAALLVVLALVSRFSGTAAERAGRR-PG-------VARMLWAMVPIVLTVVV 371 Query 350 L-IYSATVEPIYYPRYLILTAPAAAVILAVCVVTIARKPWLIAGVVFLLAAAAFPNYFFT 408 L YS + RY AP AV+LA + + W A VV +L Sbjct 372 LWTYSLLATDVLLARYFTAAAPFYAVVLAEATMALR---WRWARVVPVLLLVGALALAGF 428 Query 409 QRGPYAKEGW-DYSQVADVISAHAKPGDCLLVDNTAGWRPGP---IRALLATRPAAFRSL 464 QR PYAK W DYS +A V+ A+PGD LL + P P + LA P AF + Sbjct 429 QRRPYAKVTWEDYSLLATVMRTEAQPGDGLLTERN----PQPNENYQVALACDPDAFTHV 484 Query 465 IDVERGTYGPKVG 477 I++ + P G Sbjct 485 INLAQPNKPPLDG 497 >gi|229819505|ref|YP_002881031.1| hypothetical protein Bcav_1008 [Beutenbergia cavernae DSM 12333] gi|229565418|gb|ACQ79269.1| conserved hypothetical protein [Beutenbergia cavernae DSM 12333] Length=504 Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 143/409 (35%), Positives = 209/409 (52%), Gaps = 14/409 (3%) Query 80 PSLWFDEGATISASASRTLPELWSLLGHIDAVHGLYYLLMHGWFAIFPPTELWSRLPSCL 139 PS W DE T++ R L +L ++LG +DAVHGLYY+++ W + + +R+ S L Sbjct 49 PSPWTDEVVTLTL-LRRPLGDLLAMLGDVDAVHGLYYVVLRAWAVLAGDGIVAARMLSAL 107 Query 140 AIGAAAAGVVVFAKQFSGRTTAVCAGAVFAILPRVTWAGIEARSSALSVAAAVWLTVLLV 199 AIG AAAGVVV A+ A AGAVF LP TW G EARS+AL A AVW V LV Sbjct 108 AIGVAAAGVVVLARALGAPAAAPWAGAVFVALPVTTWVGSEARSTALVAAGAVWAGVALV 167 Query 200 AAVRCNTQRRWLLYALVLMLSILVSINLALLVPAYATMVPLLASGKSRKSPVIWWTVVTA 259 A+ WL YA ++ +++ + + +LL A+ V L A G SR+ ++ W A Sbjct 168 RAIERGGW-WWLGYAALMTVTVGLFVQASLLFLAHGLAV-LWAGGASRR--LLAWAASAA 223 Query 260 AALGAMTPFILFAHGQVWQVGWIAGLNRNIILDVIHRQYFDHSVPFAILAGLIVAAGIAA 319 + PF+L GQ QV W+ + I +F S ++A ++V + A Sbjct 224 GVAVVLAPFVLLVLGQRGQVSWLTRPEPVWVARRIVALWFGGS---PVVALVVVGLAVLA 280 Query 320 HLAGARGPGGDTHRLVLVSAAWIVVPTAVVLIYSATVEPIYYPRYLILTAPAAAVILAVC 379 +A R G T LV ++ W++VP AV++ S +EP+++PRYL+ A A++ Sbjct 281 VVAAWRAGGARTTALVRLTLPWLLVPGAVLVAVSWVLEPMFHPRYLVHCCAAMALLAGAG 340 Query 380 VVTIARKPWLIAGVVFLLAAAAFPNYFFTQRGPYAKEGWDYSQVADVISAHAKPGDCLLV 439 + I R+ W I VV + A GPYA++ D+ ADV++ A+P D +L Sbjct 341 LAAIGRRTWRI--VVAAVLGVACAVAIAVTSGPYARDLADWRSAADVVAERAEPSDVVLF 398 Query 440 --DNTAGWRPGPIRALLATRPAAFRSLIDVERGTYGPKVGTLWDGHVAV 486 D + R GP RA+ A P AF L D +WDG + V Sbjct 399 APDRVSDER-GPRRAMDAF-PGAFDDLDDPGSLPGDGDGHPIWDGGLPV 445 >gi|291435674|ref|ZP_06575064.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] gi|291338569|gb|EFE65525.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] Length=512 Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 121/411 (30%), Positives = 185/411 (46%), Gaps = 48/411 (11%) Query 67 VLAAVISGAWASR--PSLWFDEGATISASASRTLPELWSLLGHIDAVHGLYYLLMHGWFA 124 +L + G W R ++W DE T A R L ++W H+D VH LYY +MH F Sbjct 40 LLLTIALGLWGIRRKNTMWGDESVTYQL-AHRDLSQIWHTAQHVDLVHALYYAVMHEVFG 98 Query 125 IFPPTELWSRLPSCLAIGAAAAGVVVFAKQFSGRTTAVCAGAVFAILPRVTWAGIEARSS 184 +F + RLPS LA+ AA+GV + A + +G + AG VF +LP+V E RS Sbjct 99 LFGGGLVTLRLPSVLAMSVAASGVGLLALRLAGPRAGLLAGLVFPVLPQVQKYAQEGRSY 158 Query 185 ALSVAAAVWLTVLLVAAVRCNTQRRWLLYALVLMLSILVSINLALLVPAYATMVPLLASG 244 A+ A W T LV +V + RW +Y ++L+ L+ L + A+ V L+ S Sbjct 159 AMVCALVAWATYALVVSVPHRARWRWAVYGSTMLLACLLHEFAVLALVAHG--VTLVISR 216 Query 245 KSRKSPVIW-WTVVTAAALGAMTPFILFAHGQVWQVGWIAGLNRNIILDVIHRQYFDHSV 303 R PV+ W+V A + + P + + GQ QV WI G + QYF Sbjct 217 VPR--PVMRAWSVTAAGVVAGLLPLAIRSAGQAEQVSWIGG--------PVRLQYF---- 262 Query 304 PFAILAGLIVAAGIAAHLAGARGP-GGDTHRLVLVSAAWIVVPTAVVLIYSATVEPIYYP 362 L+VA LA AR P GG + V A I+V ++L+ ++ V+P++ Sbjct 263 -------LVVA---VLGLACARAPLGGKGPVRLSVLAVPILVLPGLLLLIASLVKPLFVD 312 Query 363 RYLILTAPAAAVILAVCVVTIARKP------WLIAGVVFLLAAAAFPNYFFTQRGPYAKE 416 RY++ + A++L + RK W+ A V + + R P ++ Sbjct 313 RYVLYSNIGIALLLGALMDHFHRKQQSSRYVWIAAVAVLAALVPS----SLSLRTPESRS 368 Query 417 GWDYSQVADVISAHAKPGDCLLVDNTAGWRPGPIRALLATRPAAFRSLIDV 467 D + + + +PGD LL + G R L A P R L D+ Sbjct 369 D-DVTAIGAAVRTAGRPGDGLLHLS------GRHRILTAANPEDTRFLTDL 412 >gi|297192153|ref|ZP_06909551.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC 25486] gi|197720202|gb|EDY64110.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC 25486] Length=519 Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 85/257 (34%), Positives = 121/257 (48%), Gaps = 18/257 (7%) Query 41 EQPAAAHVDELVARMRGRLLDP----------LAIAVLAAVISGAWA--SRPSLWFDEGA 88 EQ AA V +VA RG +P L + +A+ G W + ++W DE Sbjct 11 EQAAAGEVP-VVAAPRGPAANPVRGTAGRVQCLLVPAASALALGLWGITRQGTMWRDESV 69 Query 89 TISASASRTLPELWSLLGHIDAVHGLYYLLMHGWFAIFPPTELWSRLPSCLAIGAAAAGV 148 T A R+ E+W+LLG+ DAVHGLYY LMH F+++ + RLPS LA+ AAA V Sbjct 70 TYQV-AHRSPSEIWALLGNADAVHGLYYFLMHALFSVWEGGLVTLRLPSVLAVSAAAGLV 128 Query 149 VVFAKQFSGRTTAVCAGAVFAILPRVTWAGIEARSSALSVAAAVWLTVLLVAAVRCNTQR 208 + A + +GR V +G VF + P V E RS A+ A T LLV ++ R Sbjct 129 GLTAYRLAGRRAGVLSGLVFTLTPEVQMYAQEGRSYAMVCALVALATHLLVRSLTGPAGR 188 Query 209 R-WLLYALVLMLSILVSINLALLVPAYATMVPLLASGKSRKSPVIWWTVVTAAALGAMTP 267 R W Y L ++L+ + L + A+ V L + + + A L P Sbjct 189 RLWAGYTLAVLLACWLHEFAVLALVAHGVTVFLSRTDRHVRRAWALAAGTAAVCL---VP 245 Query 268 FILFAHGQVWQVGWIAG 284 + + GQ QV WI G Sbjct 246 LAVLSAGQSGQVSWIGG 262 >gi|290958929|ref|YP_003490111.1| protein [Streptomyces scabiei 87.22] gi|260648455|emb|CBG71566.1| putative integral membrane protein [Streptomyces scabiei 87.22] Length=511 Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 52/111 (47%), Positives = 66/111 (60%), Gaps = 1/111 (0%) Query 81 SLWFDEGATISASASRTLPELWSLLGHIDAVHGLYYLLMHGWFAIFPPTELWSRLPSCLA 140 ++W DE AT A R+ PE+W +LG +D VHGLYYLLMHG FA F P RLPS LA Sbjct 59 TVWRDEAATWQV-ARRSAPEIWHMLGQVDVVHGLYYLLMHGLFACFGPGTTTLRLPSVLA 117 Query 141 IGAAAAGVVVFAKQFSGRTTAVCAGAVFAILPRVTWAGIEARSSALSVAAA 191 + AAA V V ++ +G + AG FA+LP V + E R A+ A A Sbjct 118 MAVAAACVTVIGRRLAGVRAGLGAGLAFALLPAVQFHLQEGRPYAIVTAGA 168 >gi|345014391|ref|YP_004816745.1| integral membrane protein [Streptomyces violaceusniger Tu 4113] gi|344040740|gb|AEM86465.1| integral membrane protein [Streptomyces violaceusniger Tu 4113] Length=493 Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 76/203 (38%), Positives = 103/203 (51%), Gaps = 4/203 (1%) Query 81 SLWFDEGATISASASRTLPELWSLLGHIDAVHGLYYLLMHGWFAIFPPTELWSRLPSCLA 140 S+W DE T A R++ E+ LLG+ D HGLYYLLMH FA++ RLPS LA Sbjct 52 SMWRDESTTYQV-AHRSVGEIGHLLGNADVAHGLYYLLMHAVFALWDGGLPALRLPSVLA 110 Query 141 IGAAAAGVVVFAKQFSGRTTAVCAGAVFAILPRVTWAGIEARSSALSVAAAVWLTVLLVA 200 + A AAGV + + +G + AG VF + P V E RS AL AA V T LL++ Sbjct 111 MAATAAGVGLLGHRLAGPRAGLVAGLVFPLAPAVQRYAQEGRSYALVSAAVVAATHLLLS 170 Query 201 AVRCNTQRRWLLYALVLMLSILVSINLALLVPAYATMVPLLASGKSRKSPVIWWTVVTAA 260 AV +R W YA V L+ L+ L V A+ V L + +S W + Sbjct 171 AVARPRKRTWAGYAAVASLACLLHEFAILAVAAHG--VALYRARVGARSGWAWGQAASVV 228 Query 261 ALGAMTPFILFAHGQVWQVGWIA 283 AL + P ++ + Q VGWI+ Sbjct 229 AL-VLAPLVIVSQQQAALVGWIS 250 >gi|296268625|ref|YP_003651257.1| hypothetical protein Tbis_0638 [Thermobispora bispora DSM 43833] gi|296091412|gb|ADG87364.1| membrane protein-like protein [Thermobispora bispora DSM 43833] Length=567 Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 148/501 (30%), Positives = 223/501 (45%), Gaps = 37/501 (7%) Query 63 LAIAVLAAVISGAWA-SRPSLWFDEGATISASASRTLPELWSLLGHIDAVHGLYYLLMHG 121 +A+ LAA+++G W+ P LW DE AT+SA R+LPEL LL +DAVHG YY LMHG Sbjct 29 IAVPGLAALVAGLWSLGSPPLWRDEAATVSAIV-RSLPELLHLLESVDAVHGAYYALMHG 87 Query 122 WFAIFPPTELWSRLPSCLAIGAAAAGVVVFAKQFSGRTTAVCAGAVFAILPRVTWAGIEA 181 A+ + RLPS + AAAGV + + G + A +P + EA Sbjct 88 LAALLGTGPVGLRLPSVVFAALAAAGVGALGRALGHPRAGLYGGVLLAGMPIFSRYAQEA 147 Query 182 RSSALSVAAAVWLTVLLVAAVRCNTQRRWLLYALVLMLSILVSINLALLVPAYATMVPLL 241 R AL++A AV T+LLV A+R T + LY L + V++ L+V A+ L Sbjct 148 RPYALALAVAVGATLLLVRALRRRTAGAFALYGLAVAALGHVNLFAGLIVAAHGCFTLLT 207 Query 242 ASGKSRKSPVIWWTVVTAAALGAMTPFILFAHGQVWQVGWIAGLNRNIILDVIHRQYFDH 301 + PV+ W AAL A+ P A Q Q+GWI + + R + D Sbjct 208 ------RGPVVRWCAAAGAALAAVAPLAWVASRQRAQIGWIPRPDLADAGMLAVRLFGDV 261 Query 302 SV---PFAILAGLIVAAGIAAHLAGARGPGGDTHR--------------LVLVSAAWIVV 344 + LA LI A + + ARG HR L+ ++ W++V Sbjct 262 GALRPAWLGLAPLIWALAVCGAVRLARGGADGLHRRCGGDPGVSPPGRPLLALALPWLLV 321 Query 345 PTAVVLIYSATVEPIYYPRYLILTAPAAAVILAVCVVTIARKPWLIAGVVFLLAAAAFPN 404 P +L S +P+Y RY++ PAAA++ + + K + GV+ A + P Sbjct 322 PPLTLLAVSWAAQPVYVFRYVLCCVPAAALLAGAGLAALPGK--AVPGVLAAGLALSLPG 379 Query 405 YFFTQRGPYAKEGWDYSQVADVISAHAKPGDCLLVDNTAGWRPGPIRALLATRPAAFRSL 464 + RGP ++ D V +++A A+PGD +L + P +R P F L Sbjct 380 HAAV-RGPEGRQD-DPGPVVRLVAAAARPGDGVL------FVPARVRKYAVVYPEVFGRL 431 Query 465 IDVERGTYGPKVGTLWDGHVAVWLTTAKIDKCPTLWTIANRDKSLPDHQVGEMLSPGTGF 524 DV T + G+ V A++ T+W + + + + +LS F Sbjct 432 TDVALATSPERHGSFTGRQVGRRRLVARLHGLRTVWVVGHTGATRLSERRFRLLS--RSF 489 Query 525 GRTPVYRFPSYLGFRIVERWQ 545 T +RF R V R Q Sbjct 490 VHTGQWRFRGMFVARFVARSQ 510 >gi|345010992|ref|YP_004813346.1| integral membrane protein [Streptomyces violaceusniger Tu 4113] gi|344037341|gb|AEM83066.1| integral membrane protein [Streptomyces violaceusniger Tu 4113] Length=456 Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 69/203 (34%), Positives = 101/203 (50%), Gaps = 4/203 (1%) Query 82 LWFDEGATISASASRTLPELWSLLGHIDAVHGLYYLLMHGWFAIFPPTELWSRLPSCLAI 141 +W DE T A R L ++W ID VH LYY +MH F +F L RLPS LA+ Sbjct 1 MWGDESVTYQL-AHRDLSQIWLTAQQIDLVHALYYAVMHEIFGLFGGGLLTLRLPSVLAM 59 Query 142 GAAAAGVVVFAKQFSGRTTAVCAGAVFAILPRVTWAGIEARSSALSVAAAVWLTVLLVAA 201 AA+GV + + +G + AG VF +LP+V E RS A+ A W + LV + Sbjct 60 SVAASGVGLLGLRLAGPRAGLLAGLVFPLLPQVQKYAQEGRSYAMVCALVTWASYALVVS 119 Query 202 VRCNTQRRWLLYALVLMLSILVSINLALLVPAYATMVPLLASGKSRKSPVIWWTVVTAAA 261 V + RW +Y ++L+ L+ L + A+ V L+ S R + + W+V A Sbjct 120 VPHRARWRWAVYGSTMLLACLLHEFAVLALVAHG--VTLVVSRVPRPA-LRAWSVTAAGV 176 Query 262 LGAMTPFILFAHGQVWQVGWIAG 284 + + P + + GQ QV WI G Sbjct 177 VAGLLPLAICSAGQSGQVSWIGG 199 >gi|271969641|ref|YP_003343837.1| membrane protein [Streptosporangium roseum DSM 43021] gi|270512816|gb|ACZ91094.1| membrane protein-like protein [Streptosporangium roseum DSM 43021] Length=506 Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 118/408 (29%), Positives = 168/408 (42%), Gaps = 59/408 (14%) Query 80 PSLWFDEGATISASASRTLPELWSLLGHIDAVHGLYYLLMHGWFAIFPPTELWSRLPSCL 139 PS W DE ++ A A+ + ELW LL IDAVH LYYL++ FA F E RLPS L Sbjct 29 PSFWRDESVSVMA-ATMSFDELWRLLDDIDAVHALYYLMLRP-FAAFG-GEFAVRLPSAL 85 Query 140 AIGAAAAGVVVFAKQFSGRTTAVCAGAVFAILPRVTWAGIEARSSALSVAAAVWLTVLLV 199 A+ A GV ++ + + AG V+A+LP ++ G EARS AL A AV T +L+ Sbjct 86 AVAGATFGVAAIGRRLATPQVGLLAGLVYALLPMISRYGQEARSYALVSAVAVAATWVLL 145 Query 200 AAVRCNTQRRWLLYALV------------LMLSILVSIN------LALLVPAYATMVPL- 240 R LL AL+ +++V LA L A + PL Sbjct 146 GERRSRYAWYGLLVALLGWFHLYALLLLPAHAAVVVRRRGETVPWLASLAGAGVLLAPLA 205 Query 241 -LASGKSRKSPVIWWTVVTAAALGA---------------MTPFILFA-----------H 273 +ASG+ R+ + W V LG + P + A H Sbjct 206 VIASGQ-REEQLFWLKVPGLPELGQLGVDIAGGDAAWTSPLLPALFLATLIALVLLGIWH 264 Query 274 GQVWQVGWI--AGLNRNIILDVIHRQYF-DHSVPFAILAGLIVAAGIAAHLAGARGPGGD 330 G + + AG R HR+ DH + A G GPG Sbjct 265 GTRLRRRGVLTAGGRRQDAEAGGHREDLTDHREDLTGHREGLTAGGRREGPVAGEGPGRP 324 Query 331 THRLVLVSAAWIVVPTAVVLIYSATVEPIYYPRYLILTAPAAAVILAVCVVTIARKPWLI 390 + L V+ W V+P + L+ S + P+Y PRY++ P A++ V + + R P Sbjct 325 S--LAGVAVPWAVLPVVLSLLIS-QIHPVYSPRYVLFAVPGLALLAGVGLAALRRTP--A 379 Query 391 AGVVFLLAAAAFPNYFFTQRGPYAKEGWDYSQVADVISAHAKPGDCLL 438 A + RGP A D +A +SA +PGD +L Sbjct 380 TWAALTALAVLAASAHLAVRGP-ANRPDDLRTLAAELSAQERPGDAVL 426 >gi|297161360|gb|ADI11072.1| hypothetical protein SBI_07952 [Streptomyces bingchenggensis BCW-1] Length=499 Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 124/411 (31%), Positives = 177/411 (44%), Gaps = 35/411 (8%) Query 74 GAWASR--PSLWFDEGATISASASRTLPELWSLLGHIDAVHGLYYLLMHGWFAIFPPTEL 131 G W R S+W DE T A R++ +LW LLG D HGLYYLLMHG F ++ L Sbjct 49 GLWGIRRQNSMWRDESTTYQV-AHRSVADLWHLLGEADVAHGLYYLLMHGVFTLWDGGLL 107 Query 132 WSRLPSCLAIGAAAAGVVVFAKQFSGRTTAVCAGAVFAILPRVTWAGIEARSSALSVAAA 191 RLPS LA+ AAAAGV + + +G + AG VFA+ P V E RS AL AA Sbjct 108 ALRLPSTLAMAAAAAGVALLGHRLAGPRAGLAAGVVFALAPAVQRYAQEGRSYALVCAAV 167 Query 192 VWLTVLLVAAVRCNTQRRWLLYALVLMLSILVSINLALLVPAYATMVPLLASGKSRKSPV 251 VW T LL++AV +R W YA + L+ L V A+ L S + + Sbjct 168 VWCTHLLLSAVTHPRKRTWAGYAAAASATCLLHEFAVLAVLAHGVA---LLSARLPEPLR 224 Query 252 IWWTVVTAAALGAMTPFILFAHGQVWQVGWIAGLNRNIILDVIHRQYFDHSVPFAILAGL 311 W +A + P + + Q VGWI R +L FAI A Sbjct 225 WAWARAASAVAVVLAPLAIVSQQQASLVGWIDDPGRPELLG------------FAIPA-- 270 Query 312 IVAAGIAAHLAGARGPGGDTHRLVLVSAAWIVVPTAVVLIYSATVEPIYYPRYLILTAPA 371 +V G A + A GP + A +++ L+ + + PIY RY++ + Sbjct 271 LVGLGCAMAPSAAAGP-----VPLRALALPLLILPGATLLAVSFIHPIYVDRYVLYSYAG 325 Query 372 AAVILAVCVVTIARK---PWLIAGVVFLLAAAAFPNYFFTQRGPYAKEGWDYSQVADVIS 428 A++ + R P A + +A AA Y R P ++ D A + Sbjct 326 FALLAGAGLEAALRAVPYPKAGAAALAAVAVAALLPYSIQLRTPQSRLD-DPMAAARAVR 384 Query 429 AHAKPGDCLLVDNTAGWRPGPIRALLATRPAAFRSLIDVERGTYGPKVGTL 479 +PGD +L + P R + + P FR L ++ + GTL Sbjct 385 ELTRPGDGVL------FMPARRREPILSSPGEFRGLRELALARHAVPSGTL 429 >gi|337763320|emb|CCB72028.1| conserved membrane protein of unknown function [Streptomyces cattleya NRRL 8057] Length=519 Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 61/143 (43%), Positives = 85/143 (60%), Gaps = 1/143 (0%) Query 81 SLWFDEGATISASASRTLPELWSLLGHIDAVHGLYYLLMHGWFAIFPPTELWSRLPSCLA 140 S+W DE A+ A R+L E+W +LG +DAVHGLYYLL+H F +FP + RLPS LA Sbjct 54 SVWRDEAASYEV-ARRSLAEIWHMLGSVDAVHGLYYLLLHCLFTVFPGGLVALRLPSVLA 112 Query 141 IGAAAAGVVVFAKQFSGRTTAVCAGAVFAILPRVTWAGIEARSSALSVAAAVWLTVLLVA 200 I AAA G ++ +G + AG VF ++P V E RS AL A V T LL+ Sbjct 113 IAAAATGTAALGRRLAGPRVGLAAGLVFPVIPEVQRYAQEGRSYALVCAVVVAATHLLLR 172 Query 201 AVRCNTQRRWLLYALVLMLSILV 223 AV N+ RW Y++ ++++ L+ Sbjct 173 AVAANSPLRWAGYSVTVLVACLL 195 >gi|329934823|ref|ZP_08284864.1| integral membrane protein [Streptomyces griseoaurantiacus M045] gi|329305645|gb|EGG49501.1| integral membrane protein [Streptomyces griseoaurantiacus M045] Length=565 Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 76/207 (37%), Positives = 103/207 (50%), Gaps = 6/207 (2%) Query 79 RPSLWFDEGATISASASRTLPELWSLLGHIDAVHGLYYLLMHGWFAIFPPTELWSRLPSC 138 R S+W DE T A R L L LLG IDAVHGLYYLL+H FA++ RLPS Sbjct 68 RHSMWRDEAVTYEV-AHRPLGALGELLGRIDAVHGLYYLLLHAVFALWDGGLTALRLPSV 126 Query 139 LAIGAAAAGVVVFAKQFSGRTTAVCAGAVFAILPRVTWAGIEARSSALSVAAAVWLTVLL 198 AAAGV + +GR AGAVFA+LP V E RS AL AA +W L Sbjct 127 AGAALAAAGVGATGARLAGRRAGTLAGAVFALLPAVQQYAQEGRSYALVCAAVIWSGHFL 186 Query 199 VAAVRCNTQRR-WLLYALVLMLSILVSINLALLVPAYATMVPLLASGKSRKSPVIWWTVV 257 + A+ R W Y VL L+ + L++ A+A + L + + + W + Sbjct 187 LRALDGPAAARWWCAYGAVLALACWLHEFAVLVLLAHAVTLRWL---RVPRWVALRWGLT 243 Query 258 TAAALGAMTPFILFAHGQ-VWQVGWIA 283 + A++P +L + GQ Q+GW+ Sbjct 244 AGTVVLAVSPLVLLSLGQSAEQLGWLG 270 >gi|302551810|ref|ZP_07304152.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM 40736] gi|302469428|gb|EFL32521.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM 40736] Length=533 Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 122/455 (27%), Positives = 183/455 (41%), Gaps = 48/455 (10%) Query 74 GAWA-SRPSLWFDEGATISASASRTLPELWSLLGHIDAVHGLYYLLMHGWFAIFPPTELW 132 G W R +W DE T A RT+P++W LL +DAVHGLYYL MH A+ P E+ Sbjct 5 GLWGVDRGGMWGDESVTFLV-AQRTVPQIWRLLHDVDAVHGLYYLFMHVVLAVHP-GEVV 62 Query 133 SRLPSCLAIGAAAAGVVVFAKQFSGRTTAVCAGAVFAILPRVTWAGIEARSSALSVAAAV 192 RLPS A A A V + +G + AG ++AI P E RS AL A Sbjct 63 LRLPSVCAATATAGLVAALGVRLAGPRVGLWAGLLYAITPMTGHYAQEGRSYALVAAGVA 122 Query 193 WLTVLLVAAVRCNTQRRWLLYALVLMLSILVSINLALLVPAYATMVPLLASGKSRKSPVI 252 T+LL+ AV T R W Y V+ + L+ L++ A+A + LL + Sbjct 123 GATLLLLRAVEAATARAWWPYGAVVAPTCLLHELAVLVLCAHAVTLGLL---RVPGRVWA 179 Query 253 WWTVVTAAALGAMTPFILFAHGQVWQVGWIAGLNRNIILDVIHRQYFDHSVPFAILAGLI 312 W AA+ + P + + GQ QV W+ + + Q H P AG++ Sbjct 180 GWGRAAGAAVLLLLPLVWVSQGQAGQVAWLGTPGWDKV-----GQLVRHFSPGP--AGVV 232 Query 313 VAAGIAAHLAGARGPGGDTHRLVLVSAAWIVVPTAVVLIYSATVEPIYYPRYLILTAPAA 372 + AG R R V+ ++VP ++L S V P+++ RY++ A Sbjct 233 FWGALLLLGAGLR-----ERRTAAVALPLLLVPPGILLTVS-QVRPLFHDRYVLYALAGA 286 Query 373 AVILAVCVVTIARKPWL-----------------------IAGVVFLLAAAAFPNYFFTQ 409 +++A V +A +AGV+ L+AA Q Sbjct 287 PLLVAAGVGRVAGALGRVGRVRWGGRRVRVGDRRVRALLGVAGVLVLVAAFVHELPVHRQ 346 Query 410 RGPYAKEGWDYSQVADVISAHAKPGDCLLVDNTAGWRPGPIRALLATRPAAFRSLIDVER 469 A + + VA + +PGD +L + G R P FR + D+ Sbjct 347 DRSAAHRPDNLAAVAALAVRQMRPGDPVLFMPSVG------RLAALAYPKGFRQVRDIAL 400 Query 470 GTYGPKVGTLWDGHVAVWLTTAKIDKCPTLWTIAN 504 P GTLW ++ +W +A Sbjct 401 RESAPGSGTLWGREATPGELRRRLAPVDRVWVVAE 435 >gi|297625250|ref|YP_003687013.1| hypothetical protein PFREUD_00530 [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296921015|emb|CBL55553.1| Hypothetical transmembrane protein [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length=510 Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 107/418 (26%), Positives = 178/418 (43%), Gaps = 36/418 (8%) Query 79 RPSLWFDEGAT--ISASASRTLPELW----SLLGHIDAVHGLYYLLMHGWFAIFPPTELW 132 R S W DE AT + + +SR + +W +L D VH YY ++H W + T Sbjct 42 RVSPWLDEVATAHVVSYSSRDMASMWQGIPTLPSGSDMVHAAYYEVVHWWVDLVGITPFT 101 Query 133 SRLPSCLAIGAAAAGVVVFAKQFSGRTTAVCAGAVFAILPRVTWAGIEARSSALSVAAAV 192 RLPS +A G + ++ GR + A + +LPR IEAR A+S A Sbjct 102 LRLPSVIAAGVGTMAMAGVGRRLVGRRGQLAYAAAYGLLPRTLLMAIEARPYAMSSMFAA 161 Query 193 WLTVLLVAAVRCNTQRRWLLYALVLMLSILVSINLALLVPAYATMVPLLASGKSRKSPVI 252 +L+V R + RW+ L + ++LV + AL + G+ R Sbjct 162 LALLLVVVYRRRPSWLRWVGLVLAIAAAMLVHLYAALPMAGLVAAAWFFTKGRRR----- 216 Query 253 WWTVVTAAALGA--MTPFILFAHGQVWQVGWIAGLNRNIILDVIHRQYFDHSVP------ 304 W + A + A + PF + Q+ Q+GW+A ++I + + + P Sbjct 217 -WMLAAAGIVSAALVAPFGVATSRQLGQIGWLASEKYSLIETALVQSWAASRTPPVPEIS 275 Query 305 ------FAILAGLIVAAGIAAHLAGARGPGGDTHRLVLVSAAWIVVPTAVVLIYSATV-- 356 A ++ A + A + +RG L ++ A + V T V +++ A++ Sbjct 276 DRVPDAIAAAMAVVAAILLIAVVVESRG-----RHLRRLAFALVPVATGVGILWIASLVW 330 Query 357 EPIYYPRYLILTAPAAAVILAVCVVTIARKPWLIAGVVFLLAAAAFPNYFFTQRGPYAKE 416 + RYL AP A+ LA + R+ W + +V LL + + F QR Sbjct 331 TNVLQGRYLTPVAPFFAMALAELAIHAQRR-W-VRSLVILLMVGSLTLFGFQQRTYAKAS 388 Query 417 GWDYSQVADVISAHAKPGDCLLVDNTAGWRPGPIRALLATRPAAFRSLIDVERGTYGP 474 DY+ ++ V+ A+ GD L+D W R ++ P AF +LID+ + T P Sbjct 389 TTDYNLMSRVMRQSARAGDGFLIDPIQDWV-FSYRGAVSVDPGAFAALIDLAQPTKPP 445 >gi|337763492|emb|CCB72200.1| conserved membrane protein of unknown function [Streptomyces cattleya NRRL 8057] Length=641 Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 99/302 (33%), Positives = 147/302 (49%), Gaps = 28/302 (9%) Query 71 VISGAWA--SRPSLWFDEGATISASASRTLPELWSLLGHIDAVHGLYYLLMHGWFAIFPP 128 ++SG W SLW DE AT A RT+ ++W + G +D VH LYY++MH FA+ Sbjct 22 LVSGLWGIGRHHSLWRDEAATWQV-AHRTVAQIWYMSGQVDLVHTLYYVVMHQVFAVLGD 80 Query 129 TELWSRLPSCLAIGAAAAGVVVFAKQFSGRTTAVCAGAVFAILPRVTWAGIEARSSALSV 188 + L RLPS L AAA + G T V AG F +LP E RS AL + Sbjct 81 SLLALRLPSVLGATVAAALTARIGARTGGPLTGVAAGLFFVLLPSAQHYAQEGRSYALVL 140 Query 189 AAAVWLTVLLVAAV-RCNTQRRWLLYALVLMLSILVSINLALLVPAYATMVPLLASGKSR 247 A A T LLV A+ R + W+ Y + ++++ L++ LL+ +A V A+G+ Sbjct 141 AGAATATWLLVRALDRPRGRAHWVCYGVAVLVTALLNWFSLLLLLGHAPTVWRAAAGRGA 200 Query 248 KSPVIWWTVVTAAALGAMTPFILFAHGQVWQVGWIAGLNRNIILDVIHRQYFDHSVPFAI 307 ++ W V +AAAL P +L + GQ QV WI +L V Sbjct 201 RT---GWAVSSAAALAGALPLVLASRGQADQVSWIRPPGWGTLLTV-------------- 243 Query 308 LAGLIVAAGIAAHLAGARGPGGDTHRLVL-VSAAWIVVPTAVVLIYSATVEPIYYPRYLI 366 +V + A LA RGPG R+ L V A ++ ++ L+ ++ V+P+Y RY++ Sbjct 244 -GAPLVCGAVCARLA-RRGPG----RVALPVVALPLLAAPSLALLAASAVKPLYVDRYVL 297 Query 367 LT 368 T Sbjct 298 FT 299 >gi|302534820|ref|ZP_07287162.1| predicted protein [Streptomyces sp. C] gi|302443715|gb|EFL15531.1| predicted protein [Streptomyces sp. C] Length=506 Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 63/135 (47%), Positives = 82/135 (61%), Gaps = 7/135 (5%) Query 79 RPSLWFDEGATISASASRTLPELWSLLGHIDAVHGLYYLLMHGWFAIFPPTELWSRLPSC 138 R W DE A+ +A ASR+ EL +LGH+DAV G YYLL+HGW ++F + RLPS Sbjct 55 RAQPWRDELASWNA-ASRSTGELVDMLGHVDAVSGAYYLLLHGWVSVFGDSLAMLRLPSA 113 Query 139 LAIGAAAAGVVVFAKQFSGRTTAVCAGAVFAILPRVTWAGIEARSSA---LSVAAAVWLT 195 LA+ AAA V+ A+ R TAV G +FA +P V+ G EARS A L+V+AA W Sbjct 114 LAMAGAAAFTVLTARTLFDRRTAVFTGLLFAFVPAVSRYGQEARSYAFVVLAVSAATW-- 171 Query 196 VLLVAAVRCNTQRRW 210 LL+ A+ RRW Sbjct 172 -LLLRALERPALRRW 185 >gi|296268847|ref|YP_003651479.1| hypothetical protein Tbis_0862 [Thermobispora bispora DSM 43833] gi|296091634|gb|ADG87586.1| membrane protein-like protein [Thermobispora bispora DSM 43833] Length=446 Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 105/359 (30%), Positives = 163/359 (46%), Gaps = 23/359 (6%) Query 85 DEGATISASASRTLPELWSLLGHIDAVHGLYYLLMHGWFAIFPPTELWSRLPSCLAIGAA 144 DE AT +A A+R+L LW L HID YYL MH W + E W RLPS + +G A Sbjct 13 DELATYNA-ATRSLDALWELAKHIDGHFLPYYLFMHLWTLLGGHAEWWMRLPSAIGVGIA 71 Query 145 AAGVVVFAKQFSGRTTAVCAGAVFAILPRVTWAGIEARSSALSVAAAVWLTVLLVAAVRC 204 AA + ++ G +CA A+FA+LP V++ G AR A + AAA L + Sbjct 72 AALLTDLGRRLHGTAAGLCAAAIFAVLPSVSFHGANARPYAFAAAAAALSAWALHRVLER 131 Query 205 NTQRRWLLYALVLMLSILVSINLALLVPAYATMVPLLASGKSRKSPVIWWTVVTAAALGA 264 T+ R YA + L + AL++PA + + + P++ + AA Sbjct 132 PTRGRLAGYAGAVALLGCTHLFSALVLPAQ------VLAALCHRVPLLRFLPALAAGCVP 185 Query 265 MTPFILFAHGQVWQVGWIAGLNRNIILDVIHRQYFDHSVPFAILAGLIVAAGIAAHLAGA 324 M + + + + WI I+L + + SVP L+ AG+A Sbjct 186 MAVLGVIGYQERHAISWIQPAEPEILLR--YPKMLTGSVPVGWALLLLAVAGLAVLW--R 241 Query 325 RGPGGDTHRLVLVSAAWIVVPTAVVLIYSATVEPIYYPRYLILTAPAAAVILAVCVVTIA 384 RG G ++ A W+++P ++L SA + P Y RYL APA A+ + V ++ Sbjct 242 RGRAG-----AVLVAGWLLLPPPLLLTISALITPAYVDRYLFPAAPALALAAGIAVASLG 296 Query 385 RKPWLIAGVVFLLAAAAFPNYF-FTQRGPYAKEGWDYSQVADVISAHAKPGDCLLVDNT 442 R L V+ ++AA P + QR + D+ VI A+PGD ++ + Sbjct 297 R---LAVPVIVIVAALGLPTQADYRQRNGHYD---DFPGAVQVIKDRARPGDAIIYGQS 349 Lambda K H 0.325 0.137 0.439 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1237758672258 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40