BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1638 Length=972 Score E Sequences producing significant alignments: (Bits) Value gi|308231893|ref|ZP_07414161.2| excinuclease ABC subunit A uvrA ... 1979 0.0 gi|15841093|ref|NP_336130.1| excinuclease ABC subunit A [Mycobac... 1979 0.0 gi|15608776|ref|NP_216154.1| excinuclease ABC subunit A [Mycobac... 1977 0.0 gi|308377783|ref|ZP_07480393.2| excinuclease ABC subunit A uvrA ... 1977 0.0 gi|339631693|ref|YP_004723335.1| excinuclease ABC subunit A [Myc... 1976 0.0 gi|289574306|ref|ZP_06454533.1| excinuclease ABC subunit A uvrA ... 1975 0.0 gi|148822845|ref|YP_001287599.1| excinuclease ABC subunit A [Myc... 1975 0.0 gi|340708377|pdb|3ZQJ|A Chain A, Mycobacterium Tuberculosis Uvra... 1974 0.0 gi|298525135|ref|ZP_07012544.1| excinuclease ABC subunit A [Myco... 1973 0.0 gi|340626643|ref|YP_004745095.1| putative excinuclease ABC subun... 1972 0.0 gi|335892188|pdb|2YGR|A Chain A, Mycobacterium Tuberculosis Uvra... 1965 0.0 gi|254364486|ref|ZP_04980532.1| excinuclease ABC (subunit A-DNA-... 1869 0.0 gi|240168021|ref|ZP_04746680.1| excinuclease ABC subunit A [Myco... 1838 0.0 gi|118463037|ref|YP_882319.1| excinuclease ABC subunit A [Mycoba... 1836 0.0 gi|41407439|ref|NP_960275.1| excinuclease ABC subunit A [Mycobac... 1835 0.0 gi|254775587|ref|ZP_05217103.1| excinuclease ABC subunit A [Myco... 1833 0.0 gi|254820328|ref|ZP_05225329.1| excinuclease ABC subunit A [Myco... 1829 0.0 gi|342860784|ref|ZP_08717434.1| excinuclease ABC subunit A [Myco... 1828 0.0 gi|296164535|ref|ZP_06847106.1| excision endonuclease subunit Uv... 1824 0.0 gi|183982457|ref|YP_001850748.1| excinuclease ABC (subunit A-DNA... 1809 0.0 gi|118617262|ref|YP_905594.1| excinuclease ABC subunit A [Mycoba... 1807 0.0 gi|289761788|ref|ZP_06521166.1| excinuclease ABC subunit A [Myco... 1790 0.0 gi|15827727|ref|NP_301990.1| excinuclease ABC subunit A [Mycobac... 1777 0.0 gi|108799954|ref|YP_640151.1| excinuclease ABC subunit A [Mycoba... 1750 0.0 gi|126435582|ref|YP_001071273.1| excinuclease ABC subunit A [Myc... 1743 0.0 gi|118471228|ref|YP_888102.1| excinuclease ABC subunit A [Mycoba... 1743 0.0 gi|120404313|ref|YP_954142.1| excinuclease ABC subunit A [Mycoba... 1741 0.0 gi|333990454|ref|YP_004523068.1| excinuclease ABC (subunit A-DNA... 1728 0.0 gi|315444468|ref|YP_004077347.1| excinuclease ABC subunit A [Myc... 1722 0.0 gi|145224132|ref|YP_001134810.1| excinuclease ABC subunit A [Myc... 1722 0.0 gi|169629401|ref|YP_001703050.1| excinuclease ABC subunit A [Myc... 1685 0.0 gi|226306787|ref|YP_002766747.1| UvrABC system protein A [Rhodoc... 1680 0.0 gi|229492733|ref|ZP_04386534.1| excinuclease ABC subunit A [Rhod... 1679 0.0 gi|111017983|ref|YP_700955.1| excinuclease ABC subunit A [Rhodoc... 1675 0.0 gi|226360113|ref|YP_002777891.1| excinuclease ABC subunit A [Rho... 1671 0.0 gi|325674236|ref|ZP_08153925.1| excision endonuclease subunit Uv... 1665 0.0 gi|312139885|ref|YP_004007221.1| excinuclease ABC subunit a uvra... 1664 0.0 gi|161598443|ref|YP_118121.2| excinuclease ABC subunit A [Nocard... 1655 0.0 gi|296140124|ref|YP_003647367.1| excinuclease ABC subunit A [Tsu... 1621 0.0 gi|333919168|ref|YP_004492749.1| Excinuclease ABC subunit A [Amy... 1616 0.0 gi|262202749|ref|YP_003273957.1| excinuclease ABC subunit A [Gor... 1613 0.0 gi|54015387|dbj|BAD56757.1| putative excision nuclease ABC subun... 1613 0.0 gi|134101817|ref|YP_001107478.1| excinuclease ABC subunit A [Sac... 1594 0.0 gi|326382693|ref|ZP_08204384.1| excinuclease ABC subunit A [Gord... 1590 0.0 gi|302528072|ref|ZP_07280414.1| excinuclease ABC, A subunit [Str... 1586 0.0 gi|343928318|ref|ZP_08767770.1| UvrABC system protein A [Gordoni... 1585 0.0 gi|340529506|gb|AEK44711.1| excinuclease ABC subunit A [Amycolat... 1580 0.0 gi|257056561|ref|YP_003134393.1| excinuclease ABC subunit A [Sac... 1578 0.0 gi|256379487|ref|YP_003103147.1| excinuclease ABC subunit A [Act... 1576 0.0 gi|331697627|ref|YP_004333866.1| UvrABC system protein A [Pseudo... 1568 0.0 >gi|308231893|ref|ZP_07414161.2| excinuclease ABC subunit A uvrA [Mycobacterium tuberculosis SUMu001] gi|308369490|ref|ZP_07417973.2| excinuclease ABC subunit A uvrA [Mycobacterium tuberculosis SUMu002] gi|308370779|ref|ZP_07422690.2| excinuclease ABC subunit A uvrA [Mycobacterium tuberculosis SUMu003] 17 more sequence titles Length=984 Score = 1979 bits (5126), Expect = 0.0, Method: Compositional matrix adjust. Identities = 972/972 (100%), Positives = 972/972 (100%), Gaps = 0/972 (0%) Query 1 VADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 VADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA Sbjct 13 VADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 72 Query 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 120 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH Sbjct 73 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 132 Query 121 CPTCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV 180 CPTCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV Sbjct 133 CPTCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV 192 Query 181 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDH 240 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDH Sbjct 193 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDH 252 Query 241 ELGAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELVV 300 ELGAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELVV Sbjct 253 ELGAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELVV 312 Query 301 PDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGADE 360 PDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGADE Sbjct 313 PDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGADE 372 Query 361 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRL 420 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRL Sbjct 373 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRL 432 Query 421 KPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSR 480 KPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSR Sbjct 433 KPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSR 492 Query 481 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 540 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR Sbjct 493 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 552 Query 541 LIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDS 600 LIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDS Sbjct 553 LIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDS 612 Query 601 ITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK 660 ITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK Sbjct 613 ITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK 672 Query 661 STLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGV 720 STLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGV Sbjct 673 STLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGV 732 Query 721 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ 780 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ Sbjct 733 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ 792 Query 781 GARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPA 840 GARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPA Sbjct 793 GARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPA 852 Query 841 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIV 900 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIV Sbjct 853 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIV 912 Query 901 IEHNLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPEDVAAVPASYTGKFLAEVVGGGASAA 960 IEHNLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPEDVAAVPASYTGKFLAEVVGGGASAA Sbjct 913 IEHNLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPEDVAAVPASYTGKFLAEVVGGGASAA 972 Query 961 TSRSNRRRNVSA 972 TSRSNRRRNVSA Sbjct 973 TSRSNRRRNVSA 984 >gi|15841093|ref|NP_336130.1| excinuclease ABC subunit A [Mycobacterium tuberculosis CDC1551] gi|308400999|ref|ZP_07493331.2| excinuclease ABC subunit A uvrA [Mycobacterium tuberculosis SUMu012] gi|13881308|gb|AAK45944.1| excinuclease ABC, subunit A [Mycobacterium tuberculosis CDC1551] gi|308366163|gb|EFP55014.1| excinuclease ABC subunit A uvrA [Mycobacterium tuberculosis SUMu012] Length=980 Score = 1979 bits (5126), Expect = 0.0, Method: Compositional matrix adjust. Identities = 972/972 (100%), Positives = 972/972 (100%), Gaps = 0/972 (0%) Query 1 VADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 VADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA Sbjct 9 VADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 68 Query 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 120 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH Sbjct 69 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 128 Query 121 CPTCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV 180 CPTCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV Sbjct 129 CPTCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV 188 Query 181 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDH 240 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDH Sbjct 189 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDH 248 Query 241 ELGAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELVV 300 ELGAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELVV Sbjct 249 ELGAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELVV 308 Query 301 PDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGADE 360 PDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGADE Sbjct 309 PDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGADE 368 Query 361 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRL 420 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRL Sbjct 369 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRL 428 Query 421 KPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSR 480 KPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSR Sbjct 429 KPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSR 488 Query 481 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 540 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR Sbjct 489 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 548 Query 541 LIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDS 600 LIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDS Sbjct 549 LIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDS 608 Query 601 ITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK 660 ITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK Sbjct 609 ITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK 668 Query 661 STLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGV 720 STLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGV Sbjct 669 STLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGV 728 Query 721 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ 780 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ Sbjct 729 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ 788 Query 781 GARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPA 840 GARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPA Sbjct 789 GARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPA 848 Query 841 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIV 900 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIV Sbjct 849 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIV 908 Query 901 IEHNLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPEDVAAVPASYTGKFLAEVVGGGASAA 960 IEHNLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPEDVAAVPASYTGKFLAEVVGGGASAA Sbjct 909 IEHNLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPEDVAAVPASYTGKFLAEVVGGGASAA 968 Query 961 TSRSNRRRNVSA 972 TSRSNRRRNVSA Sbjct 969 TSRSNRRRNVSA 980 >gi|15608776|ref|NP_216154.1| excinuclease ABC subunit A [Mycobacterium tuberculosis H37Rv] gi|31792824|ref|NP_855317.1| excinuclease ABC subunit A [Mycobacterium bovis AF2122/97] gi|121637545|ref|YP_977768.1| excinuclease ABC subunit A [Mycobacterium bovis BCG str. Pasteur 1173P2] 39 more sequence titles Length=972 Score = 1977 bits (5123), Expect = 0.0, Method: Compositional matrix adjust. Identities = 971/972 (99%), Positives = 972/972 (100%), Gaps = 0/972 (0%) Query 1 VADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 +ADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA Sbjct 1 MADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 Query 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 120 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH Sbjct 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 120 Query 121 CPTCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV 180 CPTCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV Sbjct 121 CPTCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV 180 Query 181 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDH 240 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDH Sbjct 181 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDH 240 Query 241 ELGAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELVV 300 ELGAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELVV Sbjct 241 ELGAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELVV 300 Query 301 PDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGADE 360 PDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGADE Sbjct 301 PDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGADE 360 Query 361 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRL 420 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRL Sbjct 361 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRL 420 Query 421 KPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSR 480 KPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSR Sbjct 421 KPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSR 480 Query 481 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 540 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR Sbjct 481 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 540 Query 541 LIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDS 600 LIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDS Sbjct 541 LIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDS 600 Query 601 ITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK 660 ITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK Sbjct 601 ITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK 660 Query 661 STLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGV 720 STLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGV Sbjct 661 STLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGV 720 Query 721 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ 780 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ Sbjct 721 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ 780 Query 781 GARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPA 840 GARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPA Sbjct 781 GARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPA 840 Query 841 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIV 900 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIV Sbjct 841 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIV 900 Query 901 IEHNLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPEDVAAVPASYTGKFLAEVVGGGASAA 960 IEHNLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPEDVAAVPASYTGKFLAEVVGGGASAA Sbjct 901 IEHNLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPEDVAAVPASYTGKFLAEVVGGGASAA 960 Query 961 TSRSNRRRNVSA 972 TSRSNRRRNVSA Sbjct 961 TSRSNRRRNVSA 972 >gi|308377783|ref|ZP_07480393.2| excinuclease ABC subunit A uvrA [Mycobacterium tuberculosis SUMu009] gi|308354661|gb|EFP43512.1| excinuclease ABC subunit A uvrA [Mycobacterium tuberculosis SUMu009] Length=984 Score = 1977 bits (5122), Expect = 0.0, Method: Compositional matrix adjust. Identities = 971/972 (99%), Positives = 972/972 (100%), Gaps = 0/972 (0%) Query 1 VADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 VADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA Sbjct 13 VADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 72 Query 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 120 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH Sbjct 73 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 132 Query 121 CPTCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV 180 CPTCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV Sbjct 133 CPTCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV 192 Query 181 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDH 240 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDH Sbjct 193 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDH 252 Query 241 ELGAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELVV 300 ELGAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELVV Sbjct 253 ELGAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELVV 312 Query 301 PDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGADE 360 PDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLG+ALGFDVDTPWRKLPAKARKAILEGADE Sbjct 313 PDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGKALGFDVDTPWRKLPAKARKAILEGADE 372 Query 361 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRL 420 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRL Sbjct 373 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRL 432 Query 421 KPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSR 480 KPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSR Sbjct 433 KPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSR 492 Query 481 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 540 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR Sbjct 493 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 552 Query 541 LIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDS 600 LIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDS Sbjct 553 LIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDS 612 Query 601 ITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK 660 ITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK Sbjct 613 ITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK 672 Query 661 STLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGV 720 STLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGV Sbjct 673 STLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGV 732 Query 721 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ 780 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ Sbjct 733 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ 792 Query 781 GARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPA 840 GARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPA Sbjct 793 GARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPA 852 Query 841 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIV 900 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIV Sbjct 853 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIV 912 Query 901 IEHNLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPEDVAAVPASYTGKFLAEVVGGGASAA 960 IEHNLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPEDVAAVPASYTGKFLAEVVGGGASAA Sbjct 913 IEHNLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPEDVAAVPASYTGKFLAEVVGGGASAA 972 Query 961 TSRSNRRRNVSA 972 TSRSNRRRNVSA Sbjct 973 TSRSNRRRNVSA 984 >gi|339631693|ref|YP_004723335.1| excinuclease ABC subunit A [Mycobacterium africanum GM041182] gi|339331049|emb|CCC26721.1| putative excinuclease ABC (subunit A-DNA-binding ATPase) UVRA [Mycobacterium africanum GM041182] Length=972 Score = 1976 bits (5120), Expect = 0.0, Method: Compositional matrix adjust. Identities = 970/972 (99%), Positives = 972/972 (100%), Gaps = 0/972 (0%) Query 1 VADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 +ADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA Sbjct 1 MADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 Query 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 120 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH Sbjct 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 120 Query 121 CPTCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV 180 CPTCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV Sbjct 121 CPTCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV 180 Query 181 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDH 240 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDH Sbjct 181 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDH 240 Query 241 ELGAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELVV 300 ELGAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELVV Sbjct 241 ELGAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELVV 300 Query 301 PDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGADE 360 PDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGADE Sbjct 301 PDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGADE 360 Query 361 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRL 420 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRL Sbjct 361 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRL 420 Query 421 KPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSR 480 KPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSR Sbjct 421 KPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSR 480 Query 481 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 540 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR Sbjct 481 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 540 Query 541 LIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDS 600 LIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDS Sbjct 541 LIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDS 600 Query 601 ITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK 660 ITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK Sbjct 601 ITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK 660 Query 661 STLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGV 720 STLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGV Sbjct 661 STLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGV 720 Query 721 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ 780 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ Sbjct 721 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ 780 Query 781 GARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPA 840 GARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPA Sbjct 781 GARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPA 840 Query 841 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIV 900 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIV Sbjct 841 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIV 900 Query 901 IEHNLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPEDVAAVPASYTGKFLAEVVGGGASAA 960 IEHNLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPEDV+AVPASYTGKFLAEVVGGGASAA Sbjct 901 IEHNLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPEDVSAVPASYTGKFLAEVVGGGASAA 960 Query 961 TSRSNRRRNVSA 972 TSRSNRRRNVSA Sbjct 961 TSRSNRRRNVSA 972 >gi|289574306|ref|ZP_06454533.1| excinuclease ABC subunit A uvrA [Mycobacterium tuberculosis K85] gi|289538737|gb|EFD43315.1| excinuclease ABC subunit A uvrA [Mycobacterium tuberculosis K85] Length=972 Score = 1975 bits (5117), Expect = 0.0, Method: Compositional matrix adjust. Identities = 969/972 (99%), Positives = 972/972 (100%), Gaps = 0/972 (0%) Query 1 VADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 +ADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA Sbjct 1 MADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 Query 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 120 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH Sbjct 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 120 Query 121 CPTCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV 180 CPTCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV Sbjct 121 CPTCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV 180 Query 181 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDH 240 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDH Sbjct 181 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDH 240 Query 241 ELGAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELVV 300 ELGAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELVV Sbjct 241 ELGAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELVV 300 Query 301 PDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGADE 360 PDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGADE Sbjct 301 PDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGADE 360 Query 361 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRL 420 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRL Sbjct 361 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRL 420 Query 421 KPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSR 480 KPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSR Sbjct 421 KPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSR 480 Query 481 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 540 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR Sbjct 481 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 540 Query 541 LIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDS 600 LIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDS Sbjct 541 LIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDS 600 Query 601 ITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK 660 ITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK Sbjct 601 ITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK 660 Query 661 STLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGV 720 STLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGV Sbjct 661 STLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGV 720 Query 721 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ 780 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVY+PCEVCQ Sbjct 721 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYMPCEVCQ 780 Query 781 GARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPA 840 GARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPA Sbjct 781 GARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPA 840 Query 841 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIV 900 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIV Sbjct 841 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIV 900 Query 901 IEHNLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPEDVAAVPASYTGKFLAEVVGGGASAA 960 IEHNLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPEDV+AVPASYTGKFLAEVVGGGASAA Sbjct 901 IEHNLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPEDVSAVPASYTGKFLAEVVGGGASAA 960 Query 961 TSRSNRRRNVSA 972 TSRSNRRRNVSA Sbjct 961 TSRSNRRRNVSA 972 >gi|148822845|ref|YP_001287599.1| excinuclease ABC subunit A [Mycobacterium tuberculosis F11] gi|148721372|gb|ABR05997.1| excinuclease ABC subunit A (DNA-binding ATPase) uvrA [Mycobacterium tuberculosis F11] Length=972 Score = 1975 bits (5116), Expect = 0.0, Method: Compositional matrix adjust. Identities = 970/972 (99%), Positives = 971/972 (99%), Gaps = 0/972 (0%) Query 1 VADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 +ADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA Sbjct 1 MADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 Query 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 120 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH Sbjct 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 120 Query 121 CPTCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV 180 CPTCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV Sbjct 121 CPTCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV 180 Query 181 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDH 240 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDH Sbjct 181 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDH 240 Query 241 ELGAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELVV 300 ELGAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELVV Sbjct 241 ELGAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELVV 300 Query 301 PDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGADE 360 PDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGADE Sbjct 301 PDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGADE 360 Query 361 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRL 420 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRL Sbjct 361 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRL 420 Query 421 KPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSR 480 KPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSR Sbjct 421 KPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSR 480 Query 481 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 540 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR Sbjct 481 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 540 Query 541 LIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDS 600 LIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDS Sbjct 541 LIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDS 600 Query 601 ITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK 660 ITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK Sbjct 601 ITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK 660 Query 661 STLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGV 720 STLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGV Sbjct 661 STLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGV 720 Query 721 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ 780 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ Sbjct 721 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ 780 Query 781 GARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPA 840 GARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPA Sbjct 781 GARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPA 840 Query 841 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIV 900 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIV Sbjct 841 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIV 900 Query 901 IEHNLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPEDVAAVPASYTGKFLAEVVGGGASAA 960 IEHNLDV KTSDWIIDLGPEGGAGGGTVVAQGTPEDVAAVPASYTGKFLAEVVGGGASAA Sbjct 901 IEHNLDVSKTSDWIIDLGPEGGAGGGTVVAQGTPEDVAAVPASYTGKFLAEVVGGGASAA 960 Query 961 TSRSNRRRNVSA 972 TSRSNRRRNVSA Sbjct 961 TSRSNRRRNVSA 972 >gi|340708377|pdb|3ZQJ|A Chain A, Mycobacterium Tuberculosis Uvra gi|340708378|pdb|3ZQJ|B Chain B, Mycobacterium Tuberculosis Uvra gi|340708379|pdb|3ZQJ|C Chain C, Mycobacterium Tuberculosis Uvra gi|340708380|pdb|3ZQJ|D Chain D, Mycobacterium Tuberculosis Uvra gi|340708381|pdb|3ZQJ|E Chain E, Mycobacterium Tuberculosis Uvra gi|340708382|pdb|3ZQJ|F Chain F, Mycobacterium Tuberculosis Uvra Length=993 Score = 1974 bits (5115), Expect = 0.0, Method: Compositional matrix adjust. Identities = 971/972 (99%), Positives = 972/972 (100%), Gaps = 0/972 (0%) Query 1 VADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 +ADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA Sbjct 22 MADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 81 Query 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 120 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH Sbjct 82 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 141 Query 121 CPTCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV 180 CPTCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV Sbjct 142 CPTCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV 201 Query 181 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDH 240 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDH Sbjct 202 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDH 261 Query 241 ELGAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELVV 300 ELGAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELVV Sbjct 262 ELGAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELVV 321 Query 301 PDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGADE 360 PDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGADE Sbjct 322 PDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGADE 381 Query 361 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRL 420 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRL Sbjct 382 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRL 441 Query 421 KPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSR 480 KPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSR Sbjct 442 KPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSR 501 Query 481 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 540 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR Sbjct 502 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 561 Query 541 LIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDS 600 LIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDS Sbjct 562 LIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDS 621 Query 601 ITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK 660 ITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK Sbjct 622 ITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK 681 Query 661 STLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGV 720 STLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGV Sbjct 682 STLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGV 741 Query 721 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ 780 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ Sbjct 742 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ 801 Query 781 GARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPA 840 GARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPA Sbjct 802 GARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPA 861 Query 841 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIV 900 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIV Sbjct 862 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIV 921 Query 901 IEHNLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPEDVAAVPASYTGKFLAEVVGGGASAA 960 IEHNLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPEDVAAVPASYTGKFLAEVVGGGASAA Sbjct 922 IEHNLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPEDVAAVPASYTGKFLAEVVGGGASAA 981 Query 961 TSRSNRRRNVSA 972 TSRSNRRRNVSA Sbjct 982 TSRSNRRRNVSA 993 >gi|298525135|ref|ZP_07012544.1| excinuclease ABC subunit A [Mycobacterium tuberculosis 94_M4241A] gi|298494929|gb|EFI30223.1| excinuclease ABC subunit A [Mycobacterium tuberculosis 94_M4241A] Length=972 Score = 1973 bits (5112), Expect = 0.0, Method: Compositional matrix adjust. Identities = 969/972 (99%), Positives = 970/972 (99%), Gaps = 0/972 (0%) Query 1 VADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 +ADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA Sbjct 1 MADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 Query 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 120 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH Sbjct 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 120 Query 121 CPTCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV 180 CPTCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV Sbjct 121 CPTCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV 180 Query 181 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDH 240 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDH Sbjct 181 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDH 240 Query 241 ELGAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELVV 300 ELGAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELVV Sbjct 241 ELGAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELVV 300 Query 301 PDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGADE 360 PDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGADE Sbjct 301 PDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGADE 360 Query 361 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRL 420 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRL Sbjct 361 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRL 420 Query 421 KPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSR 480 KPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSR Sbjct 421 KPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSR 480 Query 481 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 540 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR Sbjct 481 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 540 Query 541 LIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDS 600 LIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDS Sbjct 541 LIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDS 600 Query 601 ITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK 660 ITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK Sbjct 601 ITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK 660 Query 661 STLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGV 720 STLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGV Sbjct 661 STLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGV 720 Query 721 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ 780 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ Sbjct 721 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ 780 Query 781 GARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPA 840 GARYNRETLEVHYKGKTVSEVLDMSI EAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPA Sbjct 781 GARYNRETLEVHYKGKTVSEVLDMSIAEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPA 840 Query 841 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIV 900 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVI Sbjct 841 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIA 900 Query 901 IEHNLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPEDVAAVPASYTGKFLAEVVGGGASAA 960 IEHNLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPEDVAAVPASYTGKFLAEVVGGGASAA Sbjct 901 IEHNLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPEDVAAVPASYTGKFLAEVVGGGASAA 960 Query 961 TSRSNRRRNVSA 972 TSRSNRRRNVSA Sbjct 961 TSRSNRRRNVSA 972 >gi|340626643|ref|YP_004745095.1| putative excinuclease ABC subunit A-DNA-binding ATPase [Mycobacterium canettii CIPT 140010059] gi|340004833|emb|CCC43978.1| putative excinuclease ABC (subunit A-DNA-binding ATPase) UVRA [Mycobacterium canettii CIPT 140010059] Length=972 Score = 1972 bits (5110), Expect = 0.0, Method: Compositional matrix adjust. Identities = 969/972 (99%), Positives = 970/972 (99%), Gaps = 0/972 (0%) Query 1 VADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 +ADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA Sbjct 1 MADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 Query 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 120 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH Sbjct 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 120 Query 121 CPTCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV 180 CPTCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV Sbjct 121 CPTCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV 180 Query 181 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDH 240 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDH Sbjct 181 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDH 240 Query 241 ELGAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELVV 300 ELGAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELVV Sbjct 241 ELGAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELVV 300 Query 301 PDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGADE 360 PDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGADE Sbjct 301 PDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGADE 360 Query 361 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRL 420 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRL Sbjct 361 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRL 420 Query 421 KPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSR 480 KPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSR Sbjct 421 KPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSR 480 Query 481 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 540 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR Sbjct 481 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 540 Query 541 LIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDS 600 LIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGG IVHSGPYDELLRNKDS Sbjct 541 LIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGHIVHSGPYDELLRNKDS 600 Query 601 ITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK 660 ITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK Sbjct 601 ITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK 660 Query 661 STLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGV 720 STLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGV Sbjct 661 STLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGV 720 Query 721 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ 780 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ Sbjct 721 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ 780 Query 781 GARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPA 840 GARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPA Sbjct 781 GARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPA 840 Query 841 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIV 900 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIV Sbjct 841 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIV 900 Query 901 IEHNLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPEDVAAVPASYTGKFLAEVVGGGASAA 960 IEHNLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPEDVAAVPASYTGKFLAEVVGGGASAA Sbjct 901 IEHNLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPEDVAAVPASYTGKFLAEVVGGGASAA 960 Query 961 TSRSNRRRNVSA 972 TSRSNRRR VSA Sbjct 961 TSRSNRRRKVSA 972 >gi|335892188|pdb|2YGR|A Chain A, Mycobacterium Tuberculosis Uvra gi|335892189|pdb|2YGR|B Chain B, Mycobacterium Tuberculosis Uvra gi|335892190|pdb|2YGR|C Chain C, Mycobacterium Tuberculosis Uvra gi|335892191|pdb|2YGR|D Chain D, Mycobacterium Tuberculosis Uvra gi|335892192|pdb|2YGR|E Chain E, Mycobacterium Tuberculosis Uvra gi|335892193|pdb|2YGR|F Chain F, Mycobacterium Tuberculosis Uvra Length=993 Score = 1965 bits (5090), Expect = 0.0, Method: Compositional matrix adjust. Identities = 963/972 (99%), Positives = 970/972 (99%), Gaps = 0/972 (0%) Query 1 VADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 +ADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA Sbjct 22 MADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 81 Query 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 120 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH Sbjct 82 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 141 Query 121 CPTCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV 180 CPTCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV Sbjct 142 CPTCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV 201 Query 181 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDH 240 DGVVHPLTDPP+ ++QEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDH Sbjct 202 DGVVHPLTDPPRARRQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDH 261 Query 241 ELGAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELVV 300 ELGAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACP+CSGLGIRKEVDPELVV Sbjct 262 ELGAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPDCSGLGIRKEVDPELVV 321 Query 301 PDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGADE 360 PDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGADE Sbjct 322 PDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGADE 381 Query 361 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRL 420 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRL Sbjct 382 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRL 441 Query 421 KPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSR 480 KPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSR Sbjct 442 KPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSR 501 Query 481 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 540 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR Sbjct 502 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 561 Query 541 LIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDS 600 LIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDS Sbjct 562 LIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDS 621 Query 601 ITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK 660 ITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK Sbjct 622 ITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK 681 Query 661 STLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGV 720 STLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVR+DQSPIGRTPRSNPATYTGV Sbjct 682 STLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRIDQSPIGRTPRSNPATYTGV 741 Query 721 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ 780 FDKIRTLFAAT EAKVRGY+PGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ Sbjct 742 FDKIRTLFAATNEAKVRGYKPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ 801 Query 781 GARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPA 840 GARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPA Sbjct 802 GARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPA 861 Query 841 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIV 900 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIV Sbjct 862 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIV 921 Query 901 IEHNLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPEDVAAVPASYTGKFLAEVVGGGASAA 960 IEHNLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPEDVAAVPASYTGKFLAEVVGGGASAA Sbjct 922 IEHNLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPEDVAAVPASYTGKFLAEVVGGGASAA 981 Query 961 TSRSNRRRNVSA 972 TSRSNRRRNVSA Sbjct 982 TSRSNRRRNVSA 993 >gi|254364486|ref|ZP_04980532.1| excinuclease ABC (subunit A-DNA-binding ATPase) uvrA [Mycobacterium tuberculosis str. Haarlem] gi|134150000|gb|EBA42045.1| excinuclease ABC (subunit A-DNA-binding ATPase) uvrA [Mycobacterium tuberculosis str. Haarlem] Length=958 Score = 1869 bits (4842), Expect = 0.0, Method: Compositional matrix adjust. Identities = 917/917 (100%), Positives = 917/917 (100%), Gaps = 0/917 (0%) Query 1 VADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 VADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA Sbjct 9 VADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 68 Query 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 120 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH Sbjct 69 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 128 Query 121 CPTCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV 180 CPTCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV Sbjct 129 CPTCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV 188 Query 181 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDH 240 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDH Sbjct 189 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDH 248 Query 241 ELGAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELVV 300 ELGAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELVV Sbjct 249 ELGAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELVV 308 Query 301 PDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGADE 360 PDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGADE Sbjct 309 PDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGADE 368 Query 361 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRL 420 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRL Sbjct 369 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRL 428 Query 421 KPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSR 480 KPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSR Sbjct 429 KPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSR 488 Query 481 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 540 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR Sbjct 489 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 548 Query 541 LIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDS 600 LIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDS Sbjct 549 LIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDS 608 Query 601 ITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK 660 ITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK Sbjct 609 ITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK 668 Query 661 STLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGV 720 STLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGV Sbjct 669 STLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGV 728 Query 721 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ 780 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ Sbjct 729 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ 788 Query 781 GARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPA 840 GARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPA Sbjct 789 GARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPA 848 Query 841 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIV 900 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIV Sbjct 849 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIV 908 Query 901 IEHNLDVIKTSDWIIDL 917 IEHNLDVIKTSDWIIDL Sbjct 909 IEHNLDVIKTSDWIIDL 925 Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 81/205 (40%), Positives = 118/205 (58%), Gaps = 25/205 (12%) Query 768 FLPDVYVPCEVCQGARYNRETLEVHYKG--------KTVSEVLDMSIEEAAEFF------ 813 F+ DV PC VC G R E L V G K+++EV ++SI + A+F Sbjct 414 FMRDV--PCPVCAGTRLKPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLG 471 Query 814 ---EPIAG-----VHRYLRTLVDVGLGYVRLGQPAPTLSGGEAQRVKLASELQKRSTGRT 865 + IAG + L L+DVGL Y+ L + A TLSGGEAQR++LA+++ G Sbjct 472 PREQAIAGQVLKEIRSRLGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVG-V 530 Query 866 VYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIVIEHNLDVIKTSDWIIDLGPEGGAGG 925 +Y+LDEP+ GLH D R+L+ + L D GNT+IV+EH+ D I+ +DWI+D+GP G G Sbjct 531 LYVLDEPSIGLHQRDNRRLIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHG 590 Query 926 GTVVAQGTPEDVAAVPASYTGKFLA 950 G +V G +++ S TG +L+ Sbjct 591 GRIVHSGPYDELLRNKDSITGAYLS 615 >gi|240168021|ref|ZP_04746680.1| excinuclease ABC subunit A [Mycobacterium kansasii ATCC 12478] Length=969 Score = 1838 bits (4761), Expect = 0.0, Method: Compositional matrix adjust. Identities = 913/972 (94%), Positives = 938/972 (97%), Gaps = 3/972 (0%) Query 1 VADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 +A+RLIVKGAREHNLRSVDLDLPRDA+IVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA Sbjct 1 MAERLIVKGAREHNLRSVDLDLPRDAMIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 Query 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 120 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH Sbjct 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 120 Query 121 CPTCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV 180 CP CGER+ARQTPQQIVDQVLAM EGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV Sbjct 121 CPVCGERIARQTPQQIVDQVLAMAEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV 180 Query 181 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDH 240 DGVVH LTDPPKLKKQEKHDIEVVVDRLTVKAAAK+RLTDSVETALNLADGIVVLEF DH Sbjct 181 DGVVHSLTDPPKLKKQEKHDIEVVVDRLTVKAAAKQRLTDSVETALNLADGIVVLEFPDH 240 Query 241 ELGAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELVV 300 E GA HREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDP+LVV Sbjct 241 EPGASHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPDLVV 300 Query 301 PDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGADE 360 PDP+RTLA+GAVAPWS GHTAEYF RMMAGLGEALGFDVDTPWRKLPAKARKAILEG DE Sbjct 301 PDPERTLAEGAVAPWSTGHTAEYFIRMMAGLGEALGFDVDTPWRKLPAKARKAILEGCDE 360 Query 361 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRL 420 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVC GTRL Sbjct 361 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCEGTRL 420 Query 421 KPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSR 480 KPEILAVTLAG E G KSIAEVCELSIA+CADFL LTLGPREQAIAGQVLKEI+SR Sbjct 421 KPEILAVTLAGR---ELGPKSIAEVCELSIAECADFLQRLTLGPREQAIAGQVLKEIQSR 477 Query 481 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 540 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR Sbjct 478 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 537 Query 541 LIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDS 600 LIETLTRLRDLGNTLIVVEHD+DTI HADWIVDIGPGAGEHGGRIVHSGPYDELL +++S Sbjct 538 LIETLTRLRDLGNTLIVVEHDQDTIAHADWIVDIGPGAGEHGGRIVHSGPYDELLADENS 597 Query 601 ITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK 660 ITGAYLSGRESI+IPAIRR DPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK Sbjct 598 ITGAYLSGRESIDIPAIRRPADPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK 657 Query 661 STLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGV 720 STLVNDILAAVLANRLNGARQVPGRHTRVTGLD+LDKLVRVDQSPIGRTPRSNPATYTGV Sbjct 658 STLVNDILAAVLANRLNGARQVPGRHTRVTGLDHLDKLVRVDQSPIGRTPRSNPATYTGV 717 Query 721 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ 780 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ Sbjct 718 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ 777 Query 781 GARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPA 840 GARYNRETLEVHYKGKT+SEVLDMSIEEAA+FFEPI G+HRYL+TLVDVGLGYVRLGQPA Sbjct 778 GARYNRETLEVHYKGKTISEVLDMSIEEAAQFFEPITGIHRYLQTLVDVGLGYVRLGQPA 837 Query 841 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIV 900 PTLSGGEAQRVKLASELQKRSTGRT+YILDEPTTGLHF+DIRKLL VINGLVDKGNTVIV Sbjct 838 PTLSGGEAQRVKLASELQKRSTGRTIYILDEPTTGLHFEDIRKLLKVINGLVDKGNTVIV 897 Query 901 IEHNLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPEDVAAVPASYTGKFLAEVVGGGASAA 960 IEHNLDVIKTSDWI+D+GPEGGAGGGTVVAQGTPE+VAAVP SYTGKFLAEVV G A Sbjct 898 IEHNLDVIKTSDWIVDMGPEGGAGGGTVVAQGTPEEVAAVPESYTGKFLAEVVDTGKPAG 957 Query 961 TSRSNRRRNVSA 972 RSNRR VSA Sbjct 958 PPRSNRRGKVSA 969 >gi|118463037|ref|YP_882319.1| excinuclease ABC subunit A [Mycobacterium avium 104] gi|118164324|gb|ABK65221.1| excinuclease ABC, A subunit [Mycobacterium avium 104] Length=971 Score = 1836 bits (4756), Expect = 0.0, Method: Compositional matrix adjust. Identities = 906/974 (94%), Positives = 936/974 (97%), Gaps = 5/974 (0%) Query 1 VADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 +ADRLIVKGAREHNLR VDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA Sbjct 1 MADRLIVKGAREHNLRGVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 Query 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 120 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH Sbjct 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 120 Query 121 CPTCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV 180 CP CGER+ARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLF+KLNAQGYSRVRV Sbjct 121 CPVCGERIARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFEKLNAQGYSRVRV 180 Query 181 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDH 240 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKA+AK+RLTDSVETALNLADGIVVLEFVDH Sbjct 181 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKASAKQRLTDSVETALNLADGIVVLEFVDH 240 Query 241 ELGAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELVV 300 E A +REQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDP+LVV Sbjct 241 EHDAHNREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPDLVV 300 Query 301 PDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGADE 360 PDP+RTLA+GAVAPWS GHTAEYFTRMMAGLG+ LGFDVDTPWRKLPAKARKAILEG+D Sbjct 301 PDPERTLAEGAVAPWSTGHTAEYFTRMMAGLGDELGFDVDTPWRKLPAKARKAILEGSDH 360 Query 361 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRL 420 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKM+QTESEQMKERYEGFMRDVPCPVC GTRL Sbjct 361 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMAQTESEQMKERYEGFMRDVPCPVCEGTRL 420 Query 421 KPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSR 480 KPEILAVTLA G HG KSIAEVCELSI+DCA+FLN LTLGPREQAIAGQVLKEI+SR Sbjct 421 KPEILAVTLAA---GRHGKKSIAEVCELSISDCAEFLNTLTLGPREQAIAGQVLKEIQSR 477 Query 481 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 540 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR Sbjct 478 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 537 Query 541 LIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDS 600 LIETLTRLRDLGNTLIVVEHDEDTI HADWIVDIGP AGEHGG+IVHSG Y ELL N+DS Sbjct 538 LIETLTRLRDLGNTLIVVEHDEDTIAHADWIVDIGPRAGEHGGQIVHSGTYAELLANQDS 597 Query 601 ITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK 660 ITGAYLSG+ESIE+PAIRR VD RRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK Sbjct 598 ITGAYLSGKESIEMPAIRRPVDRRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK 657 Query 661 STLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGV 720 STLVNDILA VLANRLNGAR VPGRHTRVTGLD+LDKLVRVDQSPIGRTPRSNPATYTGV Sbjct 658 STLVNDILATVLANRLNGARLVPGRHTRVTGLDHLDKLVRVDQSPIGRTPRSNPATYTGV 717 Query 721 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ 780 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVC Sbjct 718 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCH 777 Query 781 GARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPA 840 GARYNRETLEVHYKGKT+SEVLDMSIEEAAEFFEPI G+HRYLRTLVDVGLGYVRLGQPA Sbjct 778 GARYNRETLEVHYKGKTISEVLDMSIEEAAEFFEPITGIHRYLRTLVDVGLGYVRLGQPA 837 Query 841 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIV 900 PTLSGGEAQRVKLA+ELQKRSTGRT+YILDEPTTGLHFDDIRKLL VINGLVDKGNTVIV Sbjct 838 PTLSGGEAQRVKLAAELQKRSTGRTIYILDEPTTGLHFDDIRKLLKVINGLVDKGNTVIV 897 Query 901 IEHNLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPEDVAAVPASYTGKFLAEVV--GGGAS 958 IEHNLDVIKTSDWI+D+GPEGGA GGTVVAQGTPEDVAAVP SYTGKFLAEV+ GG A+ Sbjct 898 IEHNLDVIKTSDWIVDMGPEGGAEGGTVVAQGTPEDVAAVPESYTGKFLAEVIGRGGAAA 957 Query 959 AATSRSNRRRNVSA 972 A RS+RRR +A Sbjct 958 GAPRRSSRRRKATA 971 >gi|41407439|ref|NP_960275.1| excinuclease ABC subunit A [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395791|gb|AAS03658.1| UvrA [Mycobacterium avium subsp. paratuberculosis K-10] gi|336457792|gb|EGO36786.1| excinuclease ABC, A subunit [Mycobacterium avium subsp. paratuberculosis S397] Length=971 Score = 1835 bits (4754), Expect = 0.0, Method: Compositional matrix adjust. Identities = 905/974 (93%), Positives = 936/974 (97%), Gaps = 5/974 (0%) Query 1 VADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 +ADRLIVKGAREHNLR VDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA Sbjct 1 MADRLIVKGAREHNLRGVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 Query 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 120 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH Sbjct 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 120 Query 121 CPTCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV 180 CP CGER+ARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLF+KLNAQGYSRVRV Sbjct 121 CPVCGERIARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFEKLNAQGYSRVRV 180 Query 181 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDH 240 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKA+AK+RLTDSVETALNLADGIVVLEFVDH Sbjct 181 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKASAKQRLTDSVETALNLADGIVVLEFVDH 240 Query 241 ELGAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELVV 300 E A +REQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDP+LVV Sbjct 241 EHDAHNREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPDLVV 300 Query 301 PDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGADE 360 PDP+RTLA+GAVAPWS GHTAEYFTRMMAGLG+ LGFDVDTPWRKLPAKARKAILEG+D Sbjct 301 PDPERTLAEGAVAPWSTGHTAEYFTRMMAGLGDELGFDVDTPWRKLPAKARKAILEGSDH 360 Query 361 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRL 420 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKM+QTESEQMKERYEGFMRDVPCPVC GTRL Sbjct 361 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMAQTESEQMKERYEGFMRDVPCPVCEGTRL 420 Query 421 KPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSR 480 KPEILAVTLA G HG KSIAEVCELSI+DCA+FLN LTLGPREQAIAGQVLKEI+SR Sbjct 421 KPEILAVTLAA---GRHGKKSIAEVCELSISDCAEFLNTLTLGPREQAIAGQVLKEIQSR 477 Query 481 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 540 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR Sbjct 478 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 537 Query 541 LIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDS 600 LIETLTRLRDLGNTLIVVEHDEDTI HADWIVDIGP AGEHGG+IVHSG Y ELL N++S Sbjct 538 LIETLTRLRDLGNTLIVVEHDEDTIAHADWIVDIGPRAGEHGGQIVHSGTYAELLANQES 597 Query 601 ITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK 660 ITGAYLSG+ESIE+PAIRR VD RRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK Sbjct 598 ITGAYLSGKESIEMPAIRRPVDRRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK 657 Query 661 STLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGV 720 STLVNDILA VLANRLNGAR VPGRHTRVTGLD+LDKLVRVDQSPIGRTPRSNPATYTGV Sbjct 658 STLVNDILATVLANRLNGARLVPGRHTRVTGLDHLDKLVRVDQSPIGRTPRSNPATYTGV 717 Query 721 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ 780 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVC Sbjct 718 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCH 777 Query 781 GARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPA 840 GARYNRETLEVHYKGKT+SEVLDMSIEEAAEFFEPI G+HRYLRTLVDVGLGYVRLGQPA Sbjct 778 GARYNRETLEVHYKGKTISEVLDMSIEEAAEFFEPITGIHRYLRTLVDVGLGYVRLGQPA 837 Query 841 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIV 900 PTLSGGEAQRVKLA+ELQKRSTGRT+YILDEPTTGLHFDDIRKLL VINGLVDKGNTVIV Sbjct 838 PTLSGGEAQRVKLAAELQKRSTGRTIYILDEPTTGLHFDDIRKLLKVINGLVDKGNTVIV 897 Query 901 IEHNLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPEDVAAVPASYTGKFLAEVV--GGGAS 958 IEHNLDVIKTSDWI+D+GPEGGA GGTVVAQGTPEDVAAVP SYTGKFLAEV+ GG A+ Sbjct 898 IEHNLDVIKTSDWIVDMGPEGGAEGGTVVAQGTPEDVAAVPESYTGKFLAEVIGRGGAAA 957 Query 959 AATSRSNRRRNVSA 972 A RS+RRR +A Sbjct 958 GAPRRSSRRRKATA 971 >gi|254775587|ref|ZP_05217103.1| excinuclease ABC subunit A [Mycobacterium avium subsp. avium ATCC 25291] Length=971 Score = 1833 bits (4748), Expect = 0.0, Method: Compositional matrix adjust. Identities = 904/974 (93%), Positives = 935/974 (96%), Gaps = 5/974 (0%) Query 1 VADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 +ADRLIVKGAREHNLR VDLDL RDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA Sbjct 1 MADRLIVKGAREHNLRGVDLDLARDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 Query 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 120 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH Sbjct 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 120 Query 121 CPTCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV 180 CP CGER+ARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLF+KLNAQGYSRVRV Sbjct 121 CPVCGERIARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFEKLNAQGYSRVRV 180 Query 181 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDH 240 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKA+AK+RLTDSVETALNLADGIVVLEFVDH Sbjct 181 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKASAKQRLTDSVETALNLADGIVVLEFVDH 240 Query 241 ELGAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELVV 300 E A +REQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDP+LVV Sbjct 241 EHDAHNREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPDLVV 300 Query 301 PDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGADE 360 PDP+RTLA+GAVAPWS GHTAEYFTRMMAGLG+ LGFDVDTPWRKLPAKARKAILEG+D Sbjct 301 PDPERTLAEGAVAPWSTGHTAEYFTRMMAGLGDELGFDVDTPWRKLPAKARKAILEGSDH 360 Query 361 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRL 420 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKM+QTESEQMKERYEGFMRDVPCPVC GTRL Sbjct 361 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMAQTESEQMKERYEGFMRDVPCPVCEGTRL 420 Query 421 KPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSR 480 KPEILAVTLA G HG KSIAEVCELSI+DCA+FLN LTLGPREQAIAGQVLKEI+SR Sbjct 421 KPEILAVTLAA---GRHGKKSIAEVCELSISDCAEFLNTLTLGPREQAIAGQVLKEIQSR 477 Query 481 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 540 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR Sbjct 478 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 537 Query 541 LIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDS 600 LIETLTRLRDLGNTLIVVEHDEDTI HADWIVDIGP AGEHGG+IVHSG Y ELL N+DS Sbjct 538 LIETLTRLRDLGNTLIVVEHDEDTIAHADWIVDIGPRAGEHGGQIVHSGTYAELLANQDS 597 Query 601 ITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK 660 ITGAYLSG+ESIE+PAIRR VD RRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK Sbjct 598 ITGAYLSGKESIEMPAIRRPVDRRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK 657 Query 661 STLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGV 720 STLVNDILA VLANRLNGAR VPGRHTRVTGLD+LDKLVRVDQSPIGRTPRSNPATYTGV Sbjct 658 STLVNDILATVLANRLNGARLVPGRHTRVTGLDHLDKLVRVDQSPIGRTPRSNPATYTGV 717 Query 721 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ 780 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVC Sbjct 718 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCH 777 Query 781 GARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPA 840 GARYNRETLEVHYKG+T+SEVLDMSIEEAAEFFEPI G+HRYLRTLVDVGLGYVRLGQPA Sbjct 778 GARYNRETLEVHYKGETISEVLDMSIEEAAEFFEPITGIHRYLRTLVDVGLGYVRLGQPA 837 Query 841 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIV 900 PTLSGGEAQRVKLA+ELQKRSTGRT+YILDEPTTGLHFDDIRKLL VINGLVDKGNTVIV Sbjct 838 PTLSGGEAQRVKLAAELQKRSTGRTIYILDEPTTGLHFDDIRKLLKVINGLVDKGNTVIV 897 Query 901 IEHNLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPEDVAAVPASYTGKFLAEVV--GGGAS 958 IEHNLDVIKTSDWI+D+GPEGGA GGTVVAQGTPEDVAAVP SYTGKFLAEV+ GG A+ Sbjct 898 IEHNLDVIKTSDWIVDMGPEGGAEGGTVVAQGTPEDVAAVPESYTGKFLAEVIGRGGAAA 957 Query 959 AATSRSNRRRNVSA 972 A RS+RRR +A Sbjct 958 GAPRRSSRRRKATA 971 >gi|254820328|ref|ZP_05225329.1| excinuclease ABC subunit A [Mycobacterium intracellulare ATCC 13950] Length=972 Score = 1829 bits (4738), Expect = 0.0, Method: Compositional matrix adjust. Identities = 896/961 (94%), Positives = 925/961 (97%), Gaps = 3/961 (0%) Query 1 VADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 +ADRLI+KGAREHNLR VDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA Sbjct 1 MADRLIIKGAREHNLRGVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 Query 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 120 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH Sbjct 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 120 Query 121 CPTCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV 180 CP CGER+ARQTPQQIVDQVLAMPEGTRF VLAPVVRTRKGEFADLF+KLNAQGYSRVRV Sbjct 121 CPVCGERIARQTPQQIVDQVLAMPEGTRFQVLAPVVRTRKGEFADLFEKLNAQGYSRVRV 180 Query 181 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDH 240 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKA+AK+RLTDSVETALNLADGIVVLEFVDH Sbjct 181 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKASAKQRLTDSVETALNLADGIVVLEFVDH 240 Query 241 ELGAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELVV 300 E A +REQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDP+LVV Sbjct 241 EHDAHNREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPDLVV 300 Query 301 PDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGADE 360 PD +RTLA+GAVAPWS GHTAEYFTRMMAGLG+ LGFDVDTPWRKLPAKARKAILEG+D Sbjct 301 PDSERTLAEGAVAPWSTGHTAEYFTRMMAGLGDELGFDVDTPWRKLPAKARKAILEGSDH 360 Query 361 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRL 420 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKM+QTESEQMKERYEGFMRDVPCPVC GTRL Sbjct 361 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMAQTESEQMKERYEGFMRDVPCPVCEGTRL 420 Query 421 KPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSR 480 KPEILAV+L S G G KSIAEVCELSI+DCADFLN LTLGPREQAIAGQVLKEI+SR Sbjct 421 KPEILAVSL---SAGNRGKKSIAEVCELSISDCADFLNTLTLGPREQAIAGQVLKEIQSR 477 Query 481 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 540 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR Sbjct 478 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 537 Query 541 LIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDS 600 LIETLTRLR LGNTLIVVEHDEDTI HADWIVDIGP AGEHGG+IVHSG Y ELL NK+S Sbjct 538 LIETLTRLRGLGNTLIVVEHDEDTIAHADWIVDIGPRAGEHGGQIVHSGTYSELLANKES 597 Query 601 ITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK 660 ITGAYLSG+ESIE+PAIRR VD RRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK Sbjct 598 ITGAYLSGKESIEMPAIRRPVDRRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK 657 Query 661 STLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGV 720 STLVNDILAAVLANRLNGAR VPGRHTRVTGLD+LDKLVRVDQSPIGRTPRSNPATYTGV Sbjct 658 STLVNDILAAVLANRLNGARLVPGRHTRVTGLDHLDKLVRVDQSPIGRTPRSNPATYTGV 717 Query 721 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ 780 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ Sbjct 718 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ 777 Query 781 GARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPA 840 GARYNRETLEVHYKGKT+SEVLDMSIEEAAEFFEPI G+HRYLRTLVDVGLGYVRLGQPA Sbjct 778 GARYNRETLEVHYKGKTISEVLDMSIEEAAEFFEPITGIHRYLRTLVDVGLGYVRLGQPA 837 Query 841 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIV 900 PTLSGGEAQRVKLA+ELQKRSTGRTVYILDEPTTGLHFDDIRKLL VINGLVDKGNTVIV Sbjct 838 PTLSGGEAQRVKLAAELQKRSTGRTVYILDEPTTGLHFDDIRKLLKVINGLVDKGNTVIV 897 Query 901 IEHNLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPEDVAAVPASYTGKFLAEVVGGGASAA 960 IEHNLDVIKTSDWI+D+GPEGGA GGTVVA+GTPEDVAAVP SYTGKFLAEV+G A A Sbjct 898 IEHNLDVIKTSDWIVDMGPEGGAEGGTVVAEGTPEDVAAVPESYTGKFLAEVIGRSAPPA 957 Query 961 T 961 + Sbjct 958 S 958 >gi|342860784|ref|ZP_08717434.1| excinuclease ABC subunit A [Mycobacterium colombiense CECT 3035] gi|342131808|gb|EGT85065.1| excinuclease ABC subunit A [Mycobacterium colombiense CECT 3035] Length=971 Score = 1828 bits (4736), Expect = 0.0, Method: Compositional matrix adjust. Identities = 894/954 (94%), Positives = 921/954 (97%), Gaps = 3/954 (0%) Query 1 VADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 +ADRLIVKGAREHNLR VDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA Sbjct 1 MADRLIVKGAREHNLRGVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 Query 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 120 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH Sbjct 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 120 Query 121 CPTCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV 180 CP CGER+ARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLF+KLNAQGYSRVRV Sbjct 121 CPICGERIARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFEKLNAQGYSRVRV 180 Query 181 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDH 240 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKA+AK+RLTDSVETALNLADGIVVLEFVDH Sbjct 181 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKASAKQRLTDSVETALNLADGIVVLEFVDH 240 Query 241 ELGAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELVV 300 E A +REQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDP+LVV Sbjct 241 EHDAHNREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPDLVV 300 Query 301 PDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGADE 360 PDP+RTLA+GAVAPWS GHTAEYFTRMMAGLGE LGFDVDTPWRKLPAKARKAILEG+D Sbjct 301 PDPERTLAEGAVAPWSAGHTAEYFTRMMAGLGEELGFDVDTPWRKLPAKARKAILEGSDH 360 Query 361 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRL 420 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKM+QTESEQMKERYEGFMRDVPCP C GTRL Sbjct 361 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMAQTESEQMKERYEGFMRDVPCPECEGTRL 420 Query 421 KPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSR 480 KPEILAVTLA G G KSIAEVCELSI+DCADFLN LTLGPRE+AIAGQVLKEI+SR Sbjct 421 KPEILAVTLAA---GGRGKKSIAEVCELSISDCADFLNGLTLGPREKAIAGQVLKEIQSR 477 Query 481 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 540 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR Sbjct 478 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 537 Query 541 LIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDS 600 LIETLTRLR LGNTLIVVEHDEDTI HADWIVDIGP AGEHGG IVHSG Y ELL NKDS Sbjct 538 LIETLTRLRGLGNTLIVVEHDEDTIAHADWIVDIGPRAGEHGGEIVHSGTYSELLANKDS 597 Query 601 ITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK 660 ITGAYLSG+E IE+PA RR++D +RQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK Sbjct 598 ITGAYLSGKERIEMPAKRRAIDRKRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK 657 Query 661 STLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGV 720 STLVNDILAAVLANRLNGARQVPGRHTRVTGLD+LDKLVRVDQSPIGRTPRSNPATYTGV Sbjct 658 STLVNDILAAVLANRLNGARQVPGRHTRVTGLDHLDKLVRVDQSPIGRTPRSNPATYTGV 717 Query 721 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ 780 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVC Sbjct 718 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCH 777 Query 781 GARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPA 840 GARYNRETLEVHYKGKT+SEVLDMSIEEAAEFFEPI G+HRYLRTLVDVGLGYVRLGQPA Sbjct 778 GARYNRETLEVHYKGKTISEVLDMSIEEAAEFFEPITGIHRYLRTLVDVGLGYVRLGQPA 837 Query 841 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIV 900 PTLSGGEAQRVKLA+ELQKRSTGRTVYILDEPTTGLHFDDIRKLL VINGLVDKGNTVIV Sbjct 838 PTLSGGEAQRVKLAAELQKRSTGRTVYILDEPTTGLHFDDIRKLLKVINGLVDKGNTVIV 897 Query 901 IEHNLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPEDVAAVPASYTGKFLAEVVG 954 IEHNLDVIKTSDWI+D+GPEGGA GGTVVA+GTPEDVAAVP SYTGKFLAEV+G Sbjct 898 IEHNLDVIKTSDWIVDMGPEGGAEGGTVVAEGTPEDVAAVPESYTGKFLAEVIG 951 >gi|296164535|ref|ZP_06847106.1| excision endonuclease subunit UvrA [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295900135|gb|EFG79570.1| excision endonuclease subunit UvrA [Mycobacterium parascrofulaceum ATCC BAA-614] Length=986 Score = 1824 bits (4725), Expect = 0.0, Method: Compositional matrix adjust. Identities = 893/972 (92%), Positives = 929/972 (96%), Gaps = 5/972 (0%) Query 1 VADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 VADRLIVKGAREHNLR VDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA Sbjct 20 VADRLIVKGAREHNLRGVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 79 Query 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 120 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH Sbjct 80 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 139 Query 121 CPTCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV 180 CP CGER+ARQTPQQIVDQVL MPEGTRF VLAPVVRTRKGEFADLF+KLNAQGYSRVRV Sbjct 140 CPVCGERIARQTPQQIVDQVLVMPEGTRFQVLAPVVRTRKGEFADLFEKLNAQGYSRVRV 199 Query 181 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDH 240 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKA+AK+RLTDSVETALNLADGIVVLEFVDH Sbjct 200 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKASAKQRLTDSVETALNLADGIVVLEFVDH 259 Query 241 ELGAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELVV 300 E A +REQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPEC+GLGIRKEVDP+LVV Sbjct 260 EHDAHNREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECTGLGIRKEVDPDLVV 319 Query 301 PDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGADE 360 PDP+RTLA+GAVAPWS GHTAEYFTRMMAGLG+ +GFDVDTPWRKLPAKARKAILEG+D Sbjct 320 PDPERTLAEGAVAPWSTGHTAEYFTRMMAGLGDEMGFDVDTPWRKLPAKARKAILEGSDH 379 Query 361 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRL 420 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKM+QTESEQMKERYEGFMRDVPCP C GTRL Sbjct 380 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMAQTESEQMKERYEGFMRDVPCPECDGTRL 439 Query 421 KPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSR 480 KPEILAVTL S G+ GAKSIAEV ELSIADC+DFLNALTLGPREQAIAGQVLKEI+SR Sbjct 440 KPEILAVTL---SAGDRGAKSIAEVSELSIADCSDFLNALTLGPREQAIAGQVLKEIQSR 496 Query 481 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 540 LGFLLDVGL+YLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR Sbjct 497 LGFLLDVGLDYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 556 Query 541 LIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDS 600 LIETLTRLRDLGNTLIVVEHDEDTI HADWIVDIGP AGEHGG+IVHSG Y ELL N DS Sbjct 557 LIETLTRLRDLGNTLIVVEHDEDTIAHADWIVDIGPRAGEHGGQIVHSGTYAELLANPDS 616 Query 601 ITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK 660 ITGA+LSG+E+I +PAIRR VD +RQLTVVGAREHNLRGIDV+FPLGVLTSVTGVSGSGK Sbjct 617 ITGAFLSGKEAIAMPAIRRPVDRKRQLTVVGAREHNLRGIDVAFPLGVLTSVTGVSGSGK 676 Query 661 STLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGV 720 STLVNDILA VLANRLNGAR VPGRHTRVTGLD+LDKLVRVDQSPIGRTPRSNPATYTGV Sbjct 677 STLVNDILATVLANRLNGARLVPGRHTRVTGLDHLDKLVRVDQSPIGRTPRSNPATYTGV 736 Query 721 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ 780 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVC Sbjct 737 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCH 796 Query 781 GARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPA 840 GARYNRETLEVHYKGKT+SEVLDMSIEEAAEFFEPI G+HRYLRTLVDVGLGYVRLGQPA Sbjct 797 GARYNRETLEVHYKGKTISEVLDMSIEEAAEFFEPITGIHRYLRTLVDVGLGYVRLGQPA 856 Query 841 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIV 900 PTLSGGEAQRVKLA+ELQKRSTGRT+YILDEPTTGLHFDDIRKLL VINGLVDKGNTVIV Sbjct 857 PTLSGGEAQRVKLAAELQKRSTGRTIYILDEPTTGLHFDDIRKLLTVINGLVDKGNTVIV 916 Query 901 IEHNLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPEDVAAVPASYTGKFLAEVVGGGASAA 960 IEHNLDVIKTSDWI+D+GPEGGA GGTVVA+GTPED+AAVP SYTGKFLAEV+ G +A Sbjct 917 IEHNLDVIKTSDWIVDMGPEGGAEGGTVVAEGTPEDIAAVPESYTGKFLAEVI--GCAAP 974 Query 961 TSRSNRRRNVSA 972 RS RRR +A Sbjct 975 PQRSTRRRKATA 986 >gi|183982457|ref|YP_001850748.1| excinuclease ABC (subunit A-DNA-binding ATPase) UvrA [Mycobacterium marinum M] gi|183175783|gb|ACC40893.1| excinuclease ABC (subunit A-DNA-binding ATPase) UvrA [Mycobacterium marinum M] Length=971 Score = 1809 bits (4685), Expect = 0.0, Method: Compositional matrix adjust. Identities = 897/956 (94%), Positives = 925/956 (97%), Gaps = 4/956 (0%) Query 1 VADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 +ADRLIVKGAREHNLR VDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA Sbjct 1 MADRLIVKGAREHNLRGVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 Query 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 120 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH Sbjct 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 120 Query 121 CPTCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV 180 CPTCGER+ARQTPQQIVDQVLAM EGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV Sbjct 121 CPTCGERIARQTPQQIVDQVLAMAEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV 180 Query 181 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVD- 239 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAK+RLTDSVETALNLADGIVVLEF D Sbjct 181 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKQRLTDSVETALNLADGIVVLEFPDD 240 Query 240 HELGAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELV 299 H+ REQRFSEKLACPNGH LAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDP+LV Sbjct 241 HDEHDHPREQRFSEKLACPNGHPLAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPDLV 300 Query 300 VPDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGAD 359 VPDPDRTLA+GAVAPWS GHTAEYFTRM+AGLG+ALGFDVDTPWRKLPAKARKAILEGAD Sbjct 301 VPDPDRTLAEGAVAPWSTGHTAEYFTRMLAGLGDALGFDVDTPWRKLPAKARKAILEGAD 360 Query 360 EQVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTR 419 EQVHVRYRNRYGRTRSYYADFEGVLAFLQRKM+QTESEQMKERYEGFMRDVPCPVC G R Sbjct 361 EQVHVRYRNRYGRTRSYYADFEGVLAFLQRKMAQTESEQMKERYEGFMRDVPCPVCDGAR 420 Query 420 LKPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRS 479 LKPEIL+VTLA GE AKSIAEVCELSI+DCADFLNALTLG REQAIAGQVLKEI+S Sbjct 421 LKPEILSVTLAA---GEQDAKSIAEVCELSISDCADFLNALTLGAREQAIAGQVLKEIQS 477 Query 480 RLGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNR 539 RLGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNR Sbjct 478 RLGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNR 537 Query 540 RLIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKD 599 RLIETLTRLRDLGNTLIVVEHDEDTIEHADW+VDIGPGAGEHGG IVHSGPY ELLRN+ Sbjct 538 RLIETLTRLRDLGNTLIVVEHDEDTIEHADWVVDIGPGAGEHGGSIVHSGPYQELLRNQS 597 Query 600 SITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSG 659 SITGA+LSGRE IEIP RRSVD RRQLTVVGAREHNLRGIDV+FPLGVLTSVTGVSGSG Sbjct 598 SITGAFLSGREGIEIPTSRRSVDSRRQLTVVGAREHNLRGIDVAFPLGVLTSVTGVSGSG 657 Query 660 KSTLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTG 719 KSTLVNDILAAVLANRLNGARQVPGRHTR+TGLD+LDKLVRVDQSPIGRTPRSNPATYTG Sbjct 658 KSTLVNDILAAVLANRLNGARQVPGRHTRITGLDHLDKLVRVDQSPIGRTPRSNPATYTG 717 Query 720 VFDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVC 779 VFDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVC Sbjct 718 VFDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVC 777 Query 780 QGARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQP 839 QGARYNRETLEVHYKGKT+SEVLDMSIEEAA+FFEPI+G+HRYLRTLVDVGLGYVRLGQP Sbjct 778 QGARYNRETLEVHYKGKTISEVLDMSIEEAADFFEPISGIHRYLRTLVDVGLGYVRLGQP 837 Query 840 APTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVI 899 APTLSGGEAQRVKLASELQKRSTGRT+YILDEPTTGLHFDDIRKLLNVI+GLVDKGNTV+ Sbjct 838 APTLSGGEAQRVKLASELQKRSTGRTIYILDEPTTGLHFDDIRKLLNVISGLVDKGNTVV 897 Query 900 VIEHNLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPEDVAAVPASYTGKFLAEVVGG 955 VIEHNLDVIKTSDWIID+GPEGGAGGGTVVAQG PED+AAVP SYTGKFLAEV+ Sbjct 898 VIEHNLDVIKTSDWIIDMGPEGGAGGGTVVAQGAPEDIAAVPESYTGKFLAEVLAA 953 >gi|118617262|ref|YP_905594.1| excinuclease ABC subunit A [Mycobacterium ulcerans Agy99] gi|118569372|gb|ABL04123.1| excinuclease ABC (subunit A-DNA-binding ATPase) UvrA [Mycobacterium ulcerans Agy99] Length=971 Score = 1807 bits (4680), Expect = 0.0, Method: Compositional matrix adjust. Identities = 894/956 (94%), Positives = 924/956 (97%), Gaps = 4/956 (0%) Query 1 VADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 +ADRLIVKGAREHNLR VDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA Sbjct 1 MADRLIVKGAREHNLRGVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 Query 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 120 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH Sbjct 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 120 Query 121 CPTCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV 180 CPTCGER+ARQTPQQIVDQVLAM EGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV Sbjct 121 CPTCGERIARQTPQQIVDQVLAMAEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV 180 Query 181 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVD- 239 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAK+RLTDSVETALNLADGIVVLEF D Sbjct 181 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKQRLTDSVETALNLADGIVVLEFPDD 240 Query 240 HELGAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELV 299 H+ REQRFSEKLACPNGH LAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDP+LV Sbjct 241 HDEHDHPREQRFSEKLACPNGHPLAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPDLV 300 Query 300 VPDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGAD 359 VPDPDRTLA+GAVAPWS GHTAEYFTRM+AGLG+ALGFDVDTPWRKLPAKARKAILEGAD Sbjct 301 VPDPDRTLAEGAVAPWSTGHTAEYFTRMLAGLGDALGFDVDTPWRKLPAKARKAILEGAD 360 Query 360 EQVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTR 419 EQVHVRYRNRYGRTRSYYADFEGVLAFLQRKM+QTESEQMKERYEGFMRDVPCPVC G R Sbjct 361 EQVHVRYRNRYGRTRSYYADFEGVLAFLQRKMAQTESEQMKERYEGFMRDVPCPVCDGAR 420 Query 420 LKPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRS 479 LKPEIL+VTLA GE AKSIAEVCELSI+DCADFLNALTLG REQAIAGQVLKEI+S Sbjct 421 LKPEILSVTLAA---GEQDAKSIAEVCELSISDCADFLNALTLGAREQAIAGQVLKEIQS 477 Query 480 RLGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNR 539 RLGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNR Sbjct 478 RLGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNR 537 Query 540 RLIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKD 599 RLIETLTRLRDLGNTLIVVEHDEDTIEHADW+VDIGPGAGEHGG IVHSGPY ELLRN+ Sbjct 538 RLIETLTRLRDLGNTLIVVEHDEDTIEHADWVVDIGPGAGEHGGSIVHSGPYQELLRNQS 597 Query 600 SITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSG 659 SITGA+LSGRE IEIP RRS+D RRQLTVVGAREHNLRG+DV+FPLGVLTSVTGVSGSG Sbjct 598 SITGAFLSGREGIEIPTSRRSIDSRRQLTVVGAREHNLRGLDVAFPLGVLTSVTGVSGSG 657 Query 660 KSTLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTG 719 KSTLVNDILAAVLANRLNGARQVPGRHTR+TGLD+LDKLVRVDQSPIGRTPRSNPATYTG Sbjct 658 KSTLVNDILAAVLANRLNGARQVPGRHTRITGLDHLDKLVRVDQSPIGRTPRSNPATYTG 717 Query 720 VFDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVC 779 VFDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVC Sbjct 718 VFDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVC 777 Query 780 QGARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQP 839 QGARYNRETLEVHY GKT+SEVLDMSIEEAA+FFEPI+G+HRYLRTLVDVGLGYVRLGQP Sbjct 778 QGARYNRETLEVHYNGKTISEVLDMSIEEAADFFEPISGIHRYLRTLVDVGLGYVRLGQP 837 Query 840 APTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVI 899 APTLSGGEAQRVKLASELQKRSTGRT+YILDEPTTGLHFDDIRKLLNVI+GLVDKGNTV+ Sbjct 838 APTLSGGEAQRVKLASELQKRSTGRTIYILDEPTTGLHFDDIRKLLNVISGLVDKGNTVV 897 Query 900 VIEHNLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPEDVAAVPASYTGKFLAEVVGG 955 VIEHNLDVIKTSDWIID+GPEGGAGGGTVVAQG PED+AAVP SYTGKFLAEV+ Sbjct 898 VIEHNLDVIKTSDWIIDMGPEGGAGGGTVVAQGAPEDIAAVPESYTGKFLAEVLAA 953 >gi|289761788|ref|ZP_06521166.1| excinuclease ABC subunit A [Mycobacterium tuberculosis GM 1503] gi|289709294|gb|EFD73310.1| excinuclease ABC subunit A [Mycobacterium tuberculosis GM 1503] Length=904 Score = 1790 bits (4637), Expect = 0.0, Method: Compositional matrix adjust. Identities = 885/898 (99%), Positives = 887/898 (99%), Gaps = 7/898 (0%) Query 1 VADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 +ADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA Sbjct 1 MADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 Query 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 120 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH Sbjct 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 120 Query 121 CPTCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV 180 CPTCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV Sbjct 121 CPTCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV 180 Query 181 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDH 240 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDH Sbjct 181 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDH 240 Query 241 ELGAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELVV 300 ELGAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELVV Sbjct 241 ELGAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELVV 300 Query 301 PDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGADE 360 PDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGADE Sbjct 301 PDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGADE 360 Query 361 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRL 420 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRL Sbjct 361 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRL 420 Query 421 KPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSR 480 KPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSR Sbjct 421 KPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSR 480 Query 481 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 540 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR Sbjct 481 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 540 Query 541 LIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDS 600 LIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDS Sbjct 541 LIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDS 600 Query 601 ITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK 660 ITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK Sbjct 601 ITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK 660 Query 661 STLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGV 720 STLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGV Sbjct 661 STLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGV 720 Query 721 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ 780 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ Sbjct 721 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ 780 Query 781 GARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPA 840 GARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPA Sbjct 781 GARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPA 840 Query 841 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRK---LLNVINGLVDKG 895 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTT D R+ LLNVIN LVDK Sbjct 841 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTT----DCTRRHTQLLNVINRLVDKA 894 Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 81/205 (40%), Positives = 118/205 (58%), Gaps = 25/205 (12%) Query 768 FLPDVYVPCEVCQGARYNRETLEVHYKG--------KTVSEVLDMSIEEAAEFF------ 813 F+ DV PC VC G R E L V G K+++EV ++SI + A+F Sbjct 406 FMRDV--PCPVCAGTRLKPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLG 463 Query 814 ---EPIAG-----VHRYLRTLVDVGLGYVRLGQPAPTLSGGEAQRVKLASELQKRSTGRT 865 + IAG + L L+DVGL Y+ L + A TLSGGEAQR++LA+++ G Sbjct 464 PREQAIAGQVLKEIRSRLGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVG-V 522 Query 866 VYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIVIEHNLDVIKTSDWIIDLGPEGGAGG 925 +Y+LDEP+ GLH D R+L+ + L D GNT+IV+EH+ D I+ +DWI+D+GP G G Sbjct 523 LYVLDEPSIGLHQRDNRRLIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHG 582 Query 926 GTVVAQGTPEDVAAVPASYTGKFLA 950 G +V G +++ S TG +L+ Sbjct 583 GRIVHSGPYDELLRNKDSITGAYLS 607 >gi|15827727|ref|NP_301990.1| excinuclease ABC subunit A [Mycobacterium leprae TN] gi|221230204|ref|YP_002503620.1| excinuclease ABC subunit A [Mycobacterium leprae Br4923] gi|22002007|sp|Q9CC24.1|UVRA_MYCLE RecName: Full=UvrABC system protein A; Short=UvrA protein; AltName: Full=Excinuclease ABC subunit A gi|13093278|emb|CAC31773.1| excinuclease ABC subunit A [Mycobacterium leprae] gi|219933311|emb|CAR71487.1| excinuclease ABC subunit A [Mycobacterium leprae Br4923] Length=969 Score = 1777 bits (4602), Expect = 0.0, Method: Compositional matrix adjust. Identities = 876/959 (92%), Positives = 908/959 (95%), Gaps = 6/959 (0%) Query 1 VADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 +ADRLIVKGAREHNLRSVDLDLPRD+LIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA Sbjct 1 MADRLIVKGAREHNLRSVDLDLPRDSLIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 Query 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 120 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH Sbjct 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 120 Query 121 CPTCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV 180 CP CGE+++RQTPQQIVDQVL +PEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV Sbjct 121 CPICGEQISRQTPQQIVDQVLVLPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV 180 Query 181 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDH 240 D VV+PL+DPPKLKKQEKHDIEVVVDRLTVK AAK+RLTDSVETALNLADGIVVLEF D Sbjct 181 DDVVYPLSDPPKLKKQEKHDIEVVVDRLTVKIAAKQRLTDSVETALNLADGIVVLEFPDD 240 Query 241 --ELGAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPEL 298 E G P REQ FSEKLACPNGH LAVDDLEPRSFSFNSPYGACPEC GLGIRKE+D +L Sbjct 241 HDERGHP-REQCFSEKLACPNGHPLAVDDLEPRSFSFNSPYGACPECVGLGIRKEIDSDL 299 Query 299 VVPDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGA 358 VVPDPDRTLA+GAVAPWS G TAEYFTRMMAGLGE LGFDVDTPWRKLPAKARKAILEG+ Sbjct 300 VVPDPDRTLAEGAVAPWSAGRTAEYFTRMMAGLGEKLGFDVDTPWRKLPAKARKAILEGS 359 Query 359 DEQVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGT 418 D QVHV+Y NRYGR RSYY DFEGVL FLQRKM QTESEQMKERYEGFMR++PCPVC GT Sbjct 360 DHQVHVQYHNRYGRPRSYYVDFEGVLTFLQRKMEQTESEQMKERYEGFMRNIPCPVCQGT 419 Query 419 RLKPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIR 478 RLKPEILAVTLA GE GAKSIAEVCELSIADC+ FLNAL LG REQAIAGQVLKEI+ Sbjct 420 RLKPEILAVTLAA---GERGAKSIAEVCELSIADCSAFLNALILGVREQAIAGQVLKEIQ 476 Query 479 SRLGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDN 538 SRLGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDN Sbjct 477 SRLGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDN 536 Query 539 RRLIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNK 598 RRLIETLTRLR LGNTLIVVEHDEDTI HADW+VDIGPGAGEHGG+IVH+G Y ELL NK Sbjct 537 RRLIETLTRLRALGNTLIVVEHDEDTIAHADWVVDIGPGAGEHGGQIVHNGTYRELLANK 596 Query 599 DSITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGS 658 DSITGAYLSGRESI P RRSVD +R+LTVVGAREHNLRGIDVSFPLGVLTSVTGVSGS Sbjct 597 DSITGAYLSGRESIATPTRRRSVDRKRELTVVGAREHNLRGIDVSFPLGVLTSVTGVSGS 656 Query 659 GKSTLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYT 718 GKSTLVNDILAAVLANRLNGARQVPGRHTRVTGL++LDKLVRVDQSPIGRTPRSNPATYT Sbjct 657 GKSTLVNDILAAVLANRLNGARQVPGRHTRVTGLEHLDKLVRVDQSPIGRTPRSNPATYT 716 Query 719 GVFDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEV 778 GVFDKIR LFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEV Sbjct 717 GVFDKIRILFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEV 776 Query 779 CQGARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQ 838 CQGARYNRETLEVHYKGK +SEVLDMSIEEAAEFFEPI G++RYLRTLVDVGLGYVRLGQ Sbjct 777 CQGARYNRETLEVHYKGKAISEVLDMSIEEAAEFFEPIIGINRYLRTLVDVGLGYVRLGQ 836 Query 839 PAPTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTV 898 PAPTLSGGEAQRVKLASELQKRSTGRT+YILDEPTTGLHFDDIRKLLNVINGLVDK NTV Sbjct 837 PAPTLSGGEAQRVKLASELQKRSTGRTIYILDEPTTGLHFDDIRKLLNVINGLVDKDNTV 896 Query 899 IVIEHNLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPEDVAAVPASYTGKFLAEVVGGGA 957 IVIEHNLDVIKTSDWI+D+GPEGGA GGTVVA+GTPEDVAAVP SYTGKFLAEVVG G Sbjct 897 IVIEHNLDVIKTSDWIVDMGPEGGAQGGTVVAEGTPEDVAAVPESYTGKFLAEVVGAGC 955 >gi|108799954|ref|YP_640151.1| excinuclease ABC subunit A [Mycobacterium sp. MCS] gi|119869064|ref|YP_939016.1| excinuclease ABC subunit A [Mycobacterium sp. KMS] gi|108770373|gb|ABG09095.1| Excinuclease ABC subunit A [Mycobacterium sp. MCS] gi|119695153|gb|ABL92226.1| Excinuclease ABC subunit A [Mycobacterium sp. KMS] Length=973 Score = 1750 bits (4532), Expect = 0.0, Method: Compositional matrix adjust. Identities = 861/972 (89%), Positives = 916/972 (95%), Gaps = 8/972 (0%) Query 1 VADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 +ADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA Sbjct 10 LADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 69 Query 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 120 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH Sbjct 70 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 129 Query 121 CPTCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV 180 CP CGER+ARQTPQQIVDQVLAM EG RF VLAPVVRTRKGEF DLF+KLN+QGYSRVRV Sbjct 130 CPVCGERIARQTPQQIVDQVLAMDEGLRFQVLAPVVRTRKGEFVDLFEKLNSQGYSRVRV 189 Query 181 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDH 240 DGVV+PLT+PPKLKKQEKHDIEVVVDRLTVKA AK+RLTDSVETAL LADGIVVLEFVD Sbjct 190 DGVVYPLTEPPKLKKQEKHDIEVVVDRLTVKATAKQRLTDSVETALTLADGIVVLEFVDR 249 Query 241 ELGAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELVV 300 E PHREQRFSEKLACPNGH LAVDDLEPRSFSFNSPYGACPEC+GLG+RKEVDPELV+ Sbjct 250 EDDHPHREQRFSEKLACPNGHPLAVDDLEPRSFSFNSPYGACPECAGLGVRKEVDPELVI 309 Query 301 PDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGADE 360 PDPD TLA+GA+APWS G TAEYFTRM+ GLGE++GFDVDTPW+KLPAK R+AILEG DE Sbjct 310 PDPDLTLAEGAIAPWSMGQTAEYFTRMLTGLGESMGFDVDTPWKKLPAKVRRAILEGCDE 369 Query 361 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRL 420 QVHV+YRNRYGRTRSYYADFEGV+AFLQR+M QT+SEQMKERYEGFMRDVPCP C GTRL Sbjct 370 QVHVKYRNRYGRTRSYYADFEGVMAFLQRRMEQTDSEQMKERYEGFMRDVPCPECDGTRL 429 Query 421 KPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSR 480 KPEILAVTLA G+HGAKSIAEV ELSIADCADFLNALTLGPREQAIAGQVLKEI+SR Sbjct 430 KPEILAVTLAA---GDHGAKSIAEVAELSIADCADFLNALTLGPREQAIAGQVLKEIQSR 486 Query 481 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 540 LGFLLDVGL+YLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR Sbjct 487 LGFLLDVGLDYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 546 Query 541 LIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDS 600 LI+TL RLR+LGNTLIVVEHD DTI HADW+VDIGP AGEHGGRIVHSG Y +LLRN +S Sbjct 547 LIDTLVRLRELGNTLIVVEHDLDTIAHADWVVDIGPAAGEHGGRIVHSGTYQDLLRNPES 606 Query 601 ITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK 660 +TGAYLSGRESIE+PAIRR VD +RQLTV+GAREHNL+ +DV+FPLGVLTSVTGVSGSGK Sbjct 607 LTGAYLSGRESIEVPAIRRPVDRKRQLTVIGAREHNLKDVDVAFPLGVLTSVTGVSGSGK 666 Query 661 STLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGV 720 STLVNDILA+VLAN+LNGARQVPGRHTR+ GLD LDKLVRVDQSPIGRTPRSNPATYTGV Sbjct 667 STLVNDILASVLANKLNGARQVPGRHTRINGLDQLDKLVRVDQSPIGRTPRSNPATYTGV 726 Query 721 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ 780 FDKIR+LFAATTEAKVRGYQPGRFSFNVKGGRCEAC+GDGTIKIEMNFLPDVYVPCEVC Sbjct 727 FDKIRSLFAATTEAKVRGYQPGRFSFNVKGGRCEACSGDGTIKIEMNFLPDVYVPCEVCH 786 Query 781 GARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPA 840 GARYNRETLEVHYKGKT++EVLD+SIE+AAEFFEPI+ +HRYL+TLVDVGLGYVRLGQPA Sbjct 787 GARYNRETLEVHYKGKTIAEVLDLSIEDAAEFFEPISSIHRYLKTLVDVGLGYVRLGQPA 846 Query 841 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIV 900 PTLSGGEAQRVKLA+ELQKRSTGRTVYILDEPTTGLHF+DIRKLL VINGLVDKGNTVIV Sbjct 847 PTLSGGEAQRVKLAAELQKRSTGRTVYILDEPTTGLHFEDIRKLLKVINGLVDKGNTVIV 906 Query 901 IEHNLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPEDVAAVPASYTGKFLAEVVGGGASAA 960 IEHNLDVIKTSDWIID+GPEGGAGGGTVVAQGTPEDVAA SYTG FLAE++ A Sbjct 907 IEHNLDVIKTSDWIIDMGPEGGAGGGTVVAQGTPEDVAANTDSYTGDFLAEMLDVPAP-- 964 Query 961 TSRSNRRRNVSA 972 + +RR VSA Sbjct 965 ---TRKRRKVSA 973 >gi|126435582|ref|YP_001071273.1| excinuclease ABC subunit A [Mycobacterium sp. JLS] gi|126235382|gb|ABN98782.1| Excinuclease ABC subunit A [Mycobacterium sp. JLS] Length=973 Score = 1743 bits (4515), Expect = 0.0, Method: Compositional matrix adjust. Identities = 859/972 (89%), Positives = 914/972 (95%), Gaps = 8/972 (0%) Query 1 VADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 +ADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA Sbjct 10 LADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 69 Query 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 120 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAG PH Sbjct 70 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGMPH 129 Query 121 CPTCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV 180 CP CGER+ARQTPQQIVDQVLAM EG RF VLAPVVRTRKGEF DLF+KLN+QGYSRVRV Sbjct 130 CPVCGERIARQTPQQIVDQVLAMDEGLRFQVLAPVVRTRKGEFVDLFEKLNSQGYSRVRV 189 Query 181 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDH 240 DGVV+PLT+PPKLKKQEKHDIEVVVDRLTVKA AK+RLTDSVETAL LADGIVVLEFVD Sbjct 190 DGVVYPLTEPPKLKKQEKHDIEVVVDRLTVKATAKQRLTDSVETALTLADGIVVLEFVDR 249 Query 241 ELGAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELVV 300 E PHREQRFSEKLACPNGH LAVDDLEPRSFSFNSPYGACPEC+GLG+RKEVDPELV+ Sbjct 250 EDDHPHREQRFSEKLACPNGHPLAVDDLEPRSFSFNSPYGACPECAGLGVRKEVDPELVI 309 Query 301 PDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGADE 360 PDPD TLA+GA+APWS G TAEYFTRM+ GLGE++GFDVDTPW+KLPAK R+AILEG DE Sbjct 310 PDPDLTLAEGAIAPWSMGQTAEYFTRMLTGLGESMGFDVDTPWKKLPAKVRRAILEGCDE 369 Query 361 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRL 420 QVHV+YRNRYGRTRSYYADFEGV+AFLQR+M QT+SEQMKERYEGFMRDVPCP C GTRL Sbjct 370 QVHVKYRNRYGRTRSYYADFEGVMAFLQRRMEQTDSEQMKERYEGFMRDVPCPECDGTRL 429 Query 421 KPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSR 480 KPEILAVTLA G+HGAKSIAEV ELSIADCADFLNALTLG REQAIAGQVLKEI+SR Sbjct 430 KPEILAVTLAA---GDHGAKSIAEVAELSIADCADFLNALTLGAREQAIAGQVLKEIQSR 486 Query 481 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 540 LGFLLDVGL+YLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR Sbjct 487 LGFLLDVGLDYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 546 Query 541 LIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDS 600 LI+TL RLR+LGNTLIVVEHD DTI HADW+VDIGP AGEHGGRIVHSG Y +LLRN +S Sbjct 547 LIDTLVRLRELGNTLIVVEHDLDTIAHADWVVDIGPAAGEHGGRIVHSGTYQDLLRNPES 606 Query 601 ITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK 660 +TGAYLSGRESIE+PAIRR VD +RQLTV+GAREHNL+ +DV+FPLGVLTSVTGVSGSGK Sbjct 607 LTGAYLSGRESIEVPAIRRPVDRKRQLTVIGAREHNLKDVDVAFPLGVLTSVTGVSGSGK 666 Query 661 STLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGV 720 STLVNDILA+VLAN+LNGARQVPGRHTR+ GLD LDKLVRVDQSPIGRTPRSNPATYTGV Sbjct 667 STLVNDILASVLANKLNGARQVPGRHTRINGLDQLDKLVRVDQSPIGRTPRSNPATYTGV 726 Query 721 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ 780 FDKIR+LFAATTEAKVRGYQPGRFSFNVKGGRCEAC+GDGTIKIEMNFLPDVYVPCEVC Sbjct 727 FDKIRSLFAATTEAKVRGYQPGRFSFNVKGGRCEACSGDGTIKIEMNFLPDVYVPCEVCH 786 Query 781 GARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPA 840 GARYNRETLEVHYKGKT++EVLD+SIE+AAEFFEPI+ +HRYL+TLVDVGLGYVRLGQPA Sbjct 787 GARYNRETLEVHYKGKTIAEVLDLSIEDAAEFFEPISSIHRYLKTLVDVGLGYVRLGQPA 846 Query 841 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIV 900 PTLSGGEAQRVKLA+ELQKRSTGRTVYILDEPTTGLHF+DIRKLL VINGLVDKGNTVIV Sbjct 847 PTLSGGEAQRVKLAAELQKRSTGRTVYILDEPTTGLHFEDIRKLLKVINGLVDKGNTVIV 906 Query 901 IEHNLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPEDVAAVPASYTGKFLAEVVGGGASAA 960 IEHNLDVIKTSDWIID+GPEGGAGGGTVVAQGTPEDVAA SYTG FLAE++ A Sbjct 907 IEHNLDVIKTSDWIIDMGPEGGAGGGTVVAQGTPEDVAANTDSYTGHFLAEMLDVPAP-- 964 Query 961 TSRSNRRRNVSA 972 + +RR VSA Sbjct 965 ---TPKRRKVSA 973 >gi|118471228|ref|YP_888102.1| excinuclease ABC subunit A [Mycobacterium smegmatis str. MC2 155] gi|118172515|gb|ABK73411.1| excinuclease ABC, A subunit [Mycobacterium smegmatis str. MC2 155] Length=964 Score = 1743 bits (4514), Expect = 0.0, Method: Compositional matrix adjust. Identities = 857/972 (89%), Positives = 915/972 (95%), Gaps = 8/972 (0%) Query 1 VADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 +ADRL+VKGAREHNLR VDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA Sbjct 1 MADRLVVKGAREHNLRGVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 Query 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 120 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH Sbjct 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 120 Query 121 CPTCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV 180 CP CGER+ARQTPQQIVDQVLAM EG RF VLAPVVRTRKGEF DLF+KLN+QGYSRVRV Sbjct 121 CPVCGERIARQTPQQIVDQVLAMDEGLRFQVLAPVVRTRKGEFVDLFEKLNSQGYSRVRV 180 Query 181 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDH 240 DGVV+PLTDPPKLKKQEKHDIEVVVDRLTVKA+AK+RLTDS+ETALNLADGIVVLEFVD Sbjct 181 DGVVYPLTDPPKLKKQEKHDIEVVVDRLTVKASAKQRLTDSIETALNLADGIVVLEFVDR 240 Query 241 ELGAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELVV 300 E PHREQRFSEKLACPNGH LAVDDLEPRSFSFNSPYGACPEC+GLGIRKEVDP+LVV Sbjct 241 EDDHPHREQRFSEKLACPNGHPLAVDDLEPRSFSFNSPYGACPECTGLGIRKEVDPDLVV 300 Query 301 PDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGADE 360 PDP+ TLA+GAVAPWS G +AEYFTRM+AGLGE +GFDV+TPW+KLPAKAR+AILEG D Sbjct 301 PDPELTLAEGAVAPWSVGQSAEYFTRMLAGLGEEMGFDVNTPWKKLPAKARRAILEGCDH 360 Query 361 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRL 420 QVHVRY+NRYGRTRSYYADFEGV+AFLQR+M QT+SEQMKERYEGFMRD+PCP C GTRL Sbjct 361 QVHVRYKNRYGRTRSYYADFEGVMAFLQRRMEQTDSEQMKERYEGFMRDIPCPECNGTRL 420 Query 421 KPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSR 480 KPEILAVTL S G+ GAKSIA+V ELSIADCADFLN+LTLGPREQAIAGQVLKEI+SR Sbjct 421 KPEILAVTL---SAGDFGAKSIAQVAELSIADCADFLNSLTLGPREQAIAGQVLKEIQSR 477 Query 481 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 540 LGFLLDVGL+YLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR Sbjct 478 LGFLLDVGLDYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 537 Query 541 LIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDS 600 LI+TL RLRDLGNTLIVVEHD DTI HADW+VDIGP AGEHGG+IVHSG YD+LLRN +S Sbjct 538 LIDTLVRLRDLGNTLIVVEHDLDTIAHADWVVDIGPAAGEHGGQIVHSGTYDDLLRNPES 597 Query 601 ITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK 660 +TGAYLSG+ESIE+PAIRR VD +RQ+TVVGARE+NL+ IDV+FPLGVLTSVTGVSGSGK Sbjct 598 LTGAYLSGKESIEVPAIRRPVDKKRQITVVGARENNLKEIDVAFPLGVLTSVTGVSGSGK 657 Query 661 STLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGV 720 ST+VNDILA VLAN+LNGAR VPGRHTRV GLD LDKLVRVDQSPIGRTPRSNPATYTGV Sbjct 658 STMVNDILATVLANKLNGARLVPGRHTRVNGLDQLDKLVRVDQSPIGRTPRSNPATYTGV 717 Query 721 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ 780 FDKIR+LFAATTEAKVRGYQPGRFSFNVKGGRCEAC+GDGTIKIEMNFLPDVYVPCEVC Sbjct 718 FDKIRSLFAATTEAKVRGYQPGRFSFNVKGGRCEACSGDGTIKIEMNFLPDVYVPCEVCH 777 Query 781 GARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPA 840 GARYNRETLEVHYKGKT+SEVLDMSIEEA EFFEPI+ +HRYL+TLVDVGLGYVRLGQPA Sbjct 778 GARYNRETLEVHYKGKTISEVLDMSIEEATEFFEPISSIHRYLKTLVDVGLGYVRLGQPA 837 Query 841 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIV 900 PTLSGGEAQRVKLA+ELQKRSTGRT+YILDEPTTGLHF+DIRKLL VINGLVDKGNTVIV Sbjct 838 PTLSGGEAQRVKLAAELQKRSTGRTIYILDEPTTGLHFEDIRKLLKVINGLVDKGNTVIV 897 Query 901 IEHNLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPEDVAAVPASYTGKFLAEVVGGGASAA 960 IEHNLDVIKTSDWIID+GPEGGAGGGTVVAQGTPEDVAA P SYTGKFLAE++ Sbjct 898 IEHNLDVIKTSDWIIDMGPEGGAGGGTVVAQGTPEDVAANPDSYTGKFLAELLD-----V 952 Query 961 TSRSNRRRNVSA 972 + +RR VSA Sbjct 953 PTPKRKRRKVSA 964 >gi|120404313|ref|YP_954142.1| excinuclease ABC subunit A [Mycobacterium vanbaalenii PYR-1] gi|119957131|gb|ABM14136.1| Excinuclease ABC subunit A [Mycobacterium vanbaalenii PYR-1] Length=967 Score = 1741 bits (4508), Expect = 0.0, Method: Compositional matrix adjust. Identities = 857/972 (89%), Positives = 911/972 (94%), Gaps = 5/972 (0%) Query 1 VADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 +ADRL+VKGAREHNLR VDLDLPRDA+IVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA Sbjct 1 MADRLVVKGAREHNLRGVDLDLPRDAMIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 Query 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 120 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH Sbjct 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 120 Query 121 CPTCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV 180 CP CGER+ARQTPQQIVDQVLAM EG RF VLAPVVRTRKGEF DLFDKLN+QGYSRVRV Sbjct 121 CPVCGERIARQTPQQIVDQVLAMDEGLRFQVLAPVVRTRKGEFVDLFDKLNSQGYSRVRV 180 Query 181 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDH 240 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKA AK+RLTDSVETALNLADGIVVLEFVD Sbjct 181 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKATAKQRLTDSVETALNLADGIVVLEFVDR 240 Query 241 ELGAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELVV 300 E PHREQRFSEKLACPNGH LAVDDLEPRSFSFNSPYGACPEC+GLGIRKEVDP+LVV Sbjct 241 EDDHPHREQRFSEKLACPNGHPLAVDDLEPRSFSFNSPYGACPECTGLGIRKEVDPDLVV 300 Query 301 PDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGADE 360 PDPD TLA+GA+APWS GHTAEYFTRM++GLG+ LGFDV+TPW+KLPAKAR+AILEG DE Sbjct 301 PDPDLTLAEGAIAPWSMGHTAEYFTRMLSGLGDQLGFDVNTPWKKLPAKARRAILEGCDE 360 Query 361 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRL 420 QVHVRY+NRYGRTRSYYADFEGV+AFLQR+M QT+SEQMKER EGFMRDVPCP C GTRL Sbjct 361 QVHVRYKNRYGRTRSYYADFEGVMAFLQRRMEQTDSEQMKERLEGFMRDVPCPECDGTRL 420 Query 421 KPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSR 480 KPEILAVT+ + G GAKSIAEV ELSIADCA+FLNALTLG RE AIAGQVLKEI+SR Sbjct 421 KPEILAVTM---TAGNFGAKSIAEVAELSIADCAEFLNALTLGTREAAIAGQVLKEIQSR 477 Query 481 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 540 LGFLLDVGL+YLSLSRAA TLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR Sbjct 478 LGFLLDVGLDYLSLSRAAGTLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 537 Query 541 LIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDS 600 LI+TL RLRDLGNTLIVVEHD DTI HADW+VDIGP AGEHGG+IVHSG Y++LLRN +S Sbjct 538 LIDTLVRLRDLGNTLIVVEHDLDTIAHADWVVDIGPAAGEHGGQIVHSGTYEDLLRNPNS 597 Query 601 ITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK 660 ITGAYLSG+E IE+P +RR VD +RQLTVVGAREHNLR IDV+FPLGVLTSVTGVSGSGK Sbjct 598 ITGAYLSGKEEIEVPDMRRVVDRKRQLTVVGAREHNLREIDVAFPLGVLTSVTGVSGSGK 657 Query 661 STLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGV 720 STLVNDILA+VLAN+LNGAR VPGRHTRV GLD+LDKLVRVDQSPIGRTPRSNPATYTGV Sbjct 658 STLVNDILASVLANKLNGARLVPGRHTRVNGLDHLDKLVRVDQSPIGRTPRSNPATYTGV 717 Query 721 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ 780 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEAC+GDGTIKIEMNFLPDVYVPCEVCQ Sbjct 718 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACSGDGTIKIEMNFLPDVYVPCEVCQ 777 Query 781 GARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPA 840 GARYNRETLEVHYKGKT++EVLDMSIEEAAEFF PI+ +HRYL+TLVDVGLGYVRLGQPA Sbjct 778 GARYNRETLEVHYKGKTIAEVLDMSIEEAAEFFAPISSIHRYLKTLVDVGLGYVRLGQPA 837 Query 841 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIV 900 PTLSGGEAQRVKLASELQKRSTGRT+YILDEPTTGLHF+DIRKLL VINGLVDKGNTVIV Sbjct 838 PTLSGGEAQRVKLASELQKRSTGRTIYILDEPTTGLHFEDIRKLLTVINGLVDKGNTVIV 897 Query 901 IEHNLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPEDVAAVPASYTGKFLAEVVGGGASAA 960 IEHNLDVIKTSDW++D+GPEGG+GGGTVVA GTPEDVAA P SYTG FLAE + G + Sbjct 898 IEHNLDVIKTSDWVVDMGPEGGSGGGTVVATGTPEDVAANPDSYTGHFLAETL--GVARP 955 Query 961 TSRSNRRRNVSA 972 +S RR VSA Sbjct 956 KPKSRRRSKVSA 967 >gi|333990454|ref|YP_004523068.1| excinuclease ABC (subunit A-DNA-binding ATPase) UvrA [Mycobacterium sp. JDM601] gi|333486422|gb|AEF35814.1| excinuclease ABC (subunit A-DNA-binding ATPase) UvrA [Mycobacterium sp. JDM601] Length=969 Score = 1728 bits (4475), Expect = 0.0, Method: Compositional matrix adjust. Identities = 854/953 (90%), Positives = 902/953 (95%), Gaps = 3/953 (0%) Query 1 VADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 +ADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA Sbjct 1 MADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 Query 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 120 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH Sbjct 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 120 Query 121 CPTCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV 180 CP CGER+ARQTPQQIVDQVLAM EG RF VLAPVVRTRKGEFADLF+KLN QGYSRVRV Sbjct 121 CPVCGERIARQTPQQIVDQVLAMDEGLRFQVLAPVVRTRKGEFADLFEKLNTQGYSRVRV 180 Query 181 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDH 240 DGVVHPLTDPPKLKKQEKHD++VVVDRLTVK AK+RLTDS+ETAL LADGIVVLEFVD Sbjct 181 DGVVHPLTDPPKLKKQEKHDVDVVVDRLTVKETAKQRLTDSIETALGLADGIVVLEFVDR 240 Query 241 ELGAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELVV 300 + PHREQRFSEKLACPNGH LAVDDLEPRSFSFNSPYGACPEC+GLGIRKEVD +LVV Sbjct 241 DDDHPHREQRFSEKLACPNGHPLAVDDLEPRSFSFNSPYGACPECAGLGIRKEVDADLVV 300 Query 301 PDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGADE 360 PDPDRTLA+GAVAPWS G T+EYFTRMMA LG+A+GFDVDTPWRKLP KARKAILEG+DE Sbjct 301 PDPDRTLAEGAVAPWSMGPTSEYFTRMMASLGDAMGFDVDTPWRKLPVKARKAILEGSDE 360 Query 361 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRL 420 QVHVRYRNRYGRTRSYY DFEGV+AFLQRKM QTESEQMKERY GFMRDVPCP CAGTRL Sbjct 361 QVHVRYRNRYGRTRSYYTDFEGVMAFLQRKMEQTESEQMKERYAGFMRDVPCPECAGTRL 420 Query 421 KPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSR 480 KPEILAVT+ + G++G+KSIA+V +LSIA+C+DFLNALTLGPREQAIAGQVLKEI+SR Sbjct 421 KPEILAVTM---TAGDYGSKSIAQVSDLSIAECSDFLNALTLGPREQAIAGQVLKEIQSR 477 Query 481 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 540 L FLLDVGLEYL+LSRAA TLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR Sbjct 478 LSFLLDVGLEYLTLSRAAGTLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 537 Query 541 LIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDS 600 LIETL RLRDLGNTLIVVEHD DTI HADWIVDIGP AGEHGGRIVHSGPY EL+ N DS Sbjct 538 LIETLVRLRDLGNTLIVVEHDLDTIAHADWIVDIGPAAGEHGGRIVHSGPYAELVANTDS 597 Query 601 ITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK 660 ITGAYLSG +SI +P +RR VD +RQL VVGAREHNLRG+DV+FPLGVLT+VTGVSGSGK Sbjct 598 ITGAYLSGAKSIAVPQLRRMVDAKRQLGVVGAREHNLRGVDVAFPLGVLTAVTGVSGSGK 657 Query 661 STLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGV 720 STLVNDILA+VLAN+LNGAR VPGRHTR+TGLD+LDKLVRVDQSPIGRTPRSNPATYTGV Sbjct 658 STLVNDILASVLANKLNGARLVPGRHTRITGLDHLDKLVRVDQSPIGRTPRSNPATYTGV 717 Query 721 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ 780 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVC Sbjct 718 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCH 777 Query 781 GARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPA 840 GARYNRETLEVHYKGKT+++VLDMSIEEAAEFFEPI +HRYLRTLVDVGLGYVRLGQPA Sbjct 778 GARYNRETLEVHYKGKTIAQVLDMSIEEAAEFFEPITAIHRYLRTLVDVGLGYVRLGQPA 837 Query 841 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIV 900 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHF+DI KLL VINGLVDKGNTVIV Sbjct 838 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFEDIAKLLGVINGLVDKGNTVIV 897 Query 901 IEHNLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPEDVAAVPASYTGKFLAEVV 953 IEHNLDVIKT+DWIID+GPEGGAGGGTVVA GTPEDV AVP SYTGKFLAE++ Sbjct 898 IEHNLDVIKTADWIIDMGPEGGAGGGTVVATGTPEDVVAVPESYTGKFLAEIL 950 >gi|315444468|ref|YP_004077347.1| excinuclease ABC subunit A [Mycobacterium sp. Spyr1] gi|315262771|gb|ADT99512.1| Excinuclease ABC subunit A [Mycobacterium sp. Spyr1] Length=967 Score = 1722 bits (4461), Expect = 0.0, Method: Compositional matrix adjust. Identities = 851/972 (88%), Positives = 905/972 (94%), Gaps = 5/972 (0%) Query 1 VADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 +ADRL+VKGAREHNLR VDLDLPRDA+IVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA Sbjct 1 MADRLVVKGAREHNLRGVDLDLPRDAMIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 Query 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 120 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH Sbjct 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 120 Query 121 CPTCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV 180 CP CGER+A+QTPQQIVDQVLAM EG RF VLAPVVRTRKGEF DLFDKLN +GYSRVRV Sbjct 121 CPVCGERIAKQTPQQIVDQVLAMDEGLRFQVLAPVVRTRKGEFVDLFDKLNTRGYSRVRV 180 Query 181 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDH 240 DGVV+PLTDPPKLKKQEKHDIEVVVDRLTVKA+AK+RLTDS+ETALNLADGIVVLEFVD Sbjct 181 DGVVYPLTDPPKLKKQEKHDIEVVVDRLTVKASAKQRLTDSIETALNLADGIVVLEFVDR 240 Query 241 ELGAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELVV 300 E PHREQRFSEKLACPNGH LAVDDLEPRSFSFNSPYGACPEC GLGIRKEVDP+LVV Sbjct 241 EDDHPHREQRFSEKLACPNGHPLAVDDLEPRSFSFNSPYGACPECLGLGIRKEVDPDLVV 300 Query 301 PDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGADE 360 PDPD TLA+GAVAPWS G+TA+YFTRM++GLG+ LGFDV+TPW+KLPAKARKAILEG DE Sbjct 301 PDPDLTLAEGAVAPWSMGNTADYFTRMLSGLGDQLGFDVNTPWKKLPAKARKAILEGCDE 360 Query 361 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRL 420 QVHVRY+NRYGRTRSYYADFEGV+AFLQR+M QT+SEQ KER EGFMRDVPCP C GTRL Sbjct 361 QVHVRYKNRYGRTRSYYADFEGVMAFLQRRMEQTDSEQTKERLEGFMRDVPCPECDGTRL 420 Query 421 KPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSR 480 KPEILAVT+ + G GAKSIAEV ELSIADCA FLNALTLG RE AIAGQVLKEI+SR Sbjct 421 KPEILAVTM---TAGTFGAKSIAEVAELSIADCAAFLNALTLGTREAAIAGQVLKEIQSR 477 Query 481 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 540 LGFLLDVGL+YLSLSRAA TLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR Sbjct 478 LGFLLDVGLDYLSLSRAAGTLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 537 Query 541 LIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDS 600 LI+TL RLRDLGNTLIVVEHD DTI HADW+VDIGP AGEHGG+IVHSG Y +LL+N +S Sbjct 538 LIDTLVRLRDLGNTLIVVEHDLDTIAHADWVVDIGPAAGEHGGQIVHSGTYADLLKNPES 597 Query 601 ITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK 660 ITGAYLSG+E IE+PA+RR VD +RQLTVVGAREHNLR IDV+FPLGVLTSVTGVSGSGK Sbjct 598 ITGAYLSGKEEIEVPAMRRVVDKKRQLTVVGAREHNLREIDVAFPLGVLTSVTGVSGSGK 657 Query 661 STLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGV 720 STLVNDILA+VLAN+LNGAR VPGRHTRV GLD+LDKLVRVDQSPIGRTPRSNPATYTGV Sbjct 658 STLVNDILASVLANKLNGARLVPGRHTRVNGLDHLDKLVRVDQSPIGRTPRSNPATYTGV 717 Query 721 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ 780 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEAC+GDGTIKIEMNFLPDVYVPCEVCQ Sbjct 718 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACSGDGTIKIEMNFLPDVYVPCEVCQ 777 Query 781 GARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPA 840 GARYNRETLEVHYKGKT++EVLDMSIEEAAEFF PI+ +HRYL+TLVDVGLGYVRLGQPA Sbjct 778 GARYNRETLEVHYKGKTIAEVLDMSIEEAAEFFAPISSIHRYLKTLVDVGLGYVRLGQPA 837 Query 841 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIV 900 PTLSGGEAQRVKLASELQKRSTGRT+YILDEPTTGLHF+DIRKLL VINGLVDKGNTVIV Sbjct 838 PTLSGGEAQRVKLASELQKRSTGRTIYILDEPTTGLHFEDIRKLLTVINGLVDKGNTVIV 897 Query 901 IEHNLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPEDVAAVPASYTGKFLAEVVGGGASAA 960 IEHNLDVIKTSDWIID+GPEGG+GGG VVA G PEDVA P SYTG FLAE +G Sbjct 898 IEHNLDVIKTSDWIIDMGPEGGSGGGNVVATGAPEDVAMNPDSYTGHFLAETLGVDRPKP 957 Query 961 TSRSNRRRNVSA 972 +R+ RR VSA Sbjct 958 KART--RRKVSA 967 >gi|145224132|ref|YP_001134810.1| excinuclease ABC subunit A [Mycobacterium gilvum PYR-GCK] gi|145216618|gb|ABP46022.1| Excinuclease ABC subunit A [Mycobacterium gilvum PYR-GCK] Length=967 Score = 1722 bits (4461), Expect = 0.0, Method: Compositional matrix adjust. Identities = 850/972 (88%), Positives = 904/972 (94%), Gaps = 5/972 (0%) Query 1 VADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 +ADRL+VKGAREHNLR VDLDLPRDA+IVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA Sbjct 1 MADRLVVKGAREHNLRGVDLDLPRDAMIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 Query 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 120 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH Sbjct 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 120 Query 121 CPTCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV 180 CP CGER+A+QTPQQIVDQVLAM EG RF VLAPVVRTRKGEF DLFDKLN QGYSRVRV Sbjct 121 CPVCGERIAKQTPQQIVDQVLAMDEGLRFQVLAPVVRTRKGEFVDLFDKLNTQGYSRVRV 180 Query 181 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDH 240 DGVV+PLTDPPKLKKQEKHDIEVVVDRLTVKA++K+RLTDS+ETALNLADGIVVLEFVD Sbjct 181 DGVVYPLTDPPKLKKQEKHDIEVVVDRLTVKASSKQRLTDSIETALNLADGIVVLEFVDR 240 Query 241 ELGAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELVV 300 E PHREQRFSEKLACPNGH LAVDDLEPRSFSFNSPYGACPEC GLGIRKEVDP+LVV Sbjct 241 EDDHPHREQRFSEKLACPNGHPLAVDDLEPRSFSFNSPYGACPECLGLGIRKEVDPDLVV 300 Query 301 PDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGADE 360 PDPD TLA+GA+APWS G+TA+YFTRM++GLG+ LGFDV+TPW+KLPAKARKAILEG DE Sbjct 301 PDPDLTLAEGAIAPWSMGNTADYFTRMLSGLGDQLGFDVNTPWKKLPAKARKAILEGCDE 360 Query 361 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRL 420 QVHVRY+NRYGRTRSYYADFEGV+AFLQR+M QT+SEQ KER EGFMRDVPCP C GTRL Sbjct 361 QVHVRYKNRYGRTRSYYADFEGVMAFLQRRMEQTDSEQTKERLEGFMRDVPCPECDGTRL 420 Query 421 KPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSR 480 KPEILAVT+ + G GAKSIAEV ELSIADCA FLNALTLG RE AIAGQVLKEI+SR Sbjct 421 KPEILAVTM---TAGTFGAKSIAEVSELSIADCAAFLNALTLGTREAAIAGQVLKEIQSR 477 Query 481 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 540 LGFLLDVGL+YLSLSRAA TLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR Sbjct 478 LGFLLDVGLDYLSLSRAAGTLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 537 Query 541 LIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDS 600 LI+TL RLRDLGNTLIVVEHD DTI HADW+VDIGP AGEHGG+IVHSG Y +LL N +S Sbjct 538 LIDTLVRLRDLGNTLIVVEHDLDTIAHADWVVDIGPAAGEHGGQIVHSGTYADLLTNPES 597 Query 601 ITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK 660 ITGAYLSG+E IE+P +RR VD +RQLTVVGAREHNLR IDVSFPLGVLTSVTGVSGSGK Sbjct 598 ITGAYLSGKEEIEVPTMRRVVDKKRQLTVVGAREHNLREIDVSFPLGVLTSVTGVSGSGK 657 Query 661 STLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGV 720 STLVNDILA+VLAN+LNGAR VPGRHTR+ GLD+LDKLVRVDQSPIGRTPRSNPATYTGV Sbjct 658 STLVNDILASVLANKLNGARLVPGRHTRINGLDHLDKLVRVDQSPIGRTPRSNPATYTGV 717 Query 721 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ 780 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEAC+GDGTIKIEMNFLPDVYVPCEVCQ Sbjct 718 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACSGDGTIKIEMNFLPDVYVPCEVCQ 777 Query 781 GARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPA 840 GARYNRETLEVHYKGKT++EVLDMSIEEAAEFF PI+ +HRYL+TLVDVGLGYVRLGQPA Sbjct 778 GARYNRETLEVHYKGKTIAEVLDMSIEEAAEFFAPISSIHRYLKTLVDVGLGYVRLGQPA 837 Query 841 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIV 900 PTLSGGEAQRVKLASELQKRSTGRT+YILDEPTTGLHF+DIRKLL VINGLVDKGNTVIV Sbjct 838 PTLSGGEAQRVKLASELQKRSTGRTIYILDEPTTGLHFEDIRKLLTVINGLVDKGNTVIV 897 Query 901 IEHNLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPEDVAAVPASYTGKFLAEVVGGGASAA 960 IEHNLDVIKTSDWIID+GPEGG+GGGTVVA G PEDVA P SYTG FLAE +G Sbjct 898 IEHNLDVIKTSDWIIDMGPEGGSGGGTVVATGAPEDVAMNPDSYTGHFLAETLGMNRPKP 957 Query 961 TSRSNRRRNVSA 972 +R+ RR VSA Sbjct 958 KARA--RRKVSA 967 >gi|169629401|ref|YP_001703050.1| excinuclease ABC subunit A [Mycobacterium abscessus ATCC 19977] gi|169241368|emb|CAM62396.1| UvrABC system protein A (UvrA protein) excinuclease [Mycobacterium abscessus] Length=984 Score = 1685 bits (4364), Expect = 0.0, Method: Compositional matrix adjust. Identities = 824/953 (87%), Positives = 898/953 (95%), Gaps = 3/953 (0%) Query 1 VADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 +ADRLIV+GAREHNLR +DLDLPRD+LIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA Sbjct 1 MADRLIVRGAREHNLRGIDLDLPRDSLIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 Query 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 120 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH Sbjct 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 120 Query 121 CPTCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV 180 CP CGE++A+QTPQQIVDQVL M EG RF VLAPVVRTRKGEF DLF++LN+QGYSR+RV Sbjct 121 CPVCGEKIAKQTPQQIVDQVLDMEEGLRFQVLAPVVRTRKGEFVDLFEQLNSQGYSRIRV 180 Query 181 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDH 240 DGVVH LTDPPKLKKQEKHDIEVV+DRL+VKA++K+RLTDSVETAL+LADGIVVLEFVD Sbjct 181 DGVVHSLTDPPKLKKQEKHDIEVVIDRLSVKASSKQRLTDSVETALHLADGIVVLEFVDA 240 Query 241 ELGAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELVV 300 + +P RE+RFSEKLACPNGH LAVDDLEPRSFSFNSPYGACPEC+GLGI+KEVDP+LVV Sbjct 241 DEDSPQRERRFSEKLACPNGHPLAVDDLEPRSFSFNSPYGACPECAGLGIKKEVDPDLVV 300 Query 301 PDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGADE 360 PDPD TLA+GA+APWS G A+YF R+MAGLG+ALGFDVDTPW+KLPA A+KAIL+G+ E Sbjct 301 PDPDMTLAEGAIAPWSMGQNADYFVRLMAGLGDALGFDVDTPWKKLPAAAKKAILDGSSE 360 Query 361 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRL 420 QVHVRY+NRYGRTRSYYA+FEGVLAFLQR+M QTESE KERYEGFMRD+PCPVC GTRL Sbjct 361 QVHVRYKNRYGRTRSYYAEFEGVLAFLQRRMEQTESEWAKERYEGFMRDIPCPVCEGTRL 420 Query 421 KPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSR 480 KPEIL+VTL + GEHG KSIAEVC+LSIADCA FL ALTLG REQAIAGQVLKE++ R Sbjct 421 KPEILSVTL---TAGEHGTKSIAEVCDLSIADCAQFLGALTLGHREQAIAGQVLKEVQFR 477 Query 481 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 540 LGFLLDVGL+YLSLSRAA TLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR Sbjct 478 LGFLLDVGLQYLSLSRAAGTLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 537 Query 541 LIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDS 600 LIETLTRLRDLGNTLIVVEHDEDTI+HADW+VDIGP AGEHGG++VHSG Y ELL+NK+S Sbjct 538 LIETLTRLRDLGNTLIVVEHDEDTIKHADWVVDIGPAAGEHGGQVVHSGTYAELLKNKNS 597 Query 601 ITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK 660 +TG+YLSG ESI +P IRR +DP+RQ+TVVGAREHNL+ IDVSFPLGVLTSVTGVSGSGK Sbjct 598 VTGSYLSGAESIPLPLIRRVIDPKRQVTVVGAREHNLKDIDVSFPLGVLTSVTGVSGSGK 657 Query 661 STLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGV 720 STLVNDILA VLAN+LNGARQVPGRHTRVTGLD +DKLVRVDQSPIGRTPRSNPATYTGV Sbjct 658 STLVNDILATVLANKLNGARQVPGRHTRVTGLDKVDKLVRVDQSPIGRTPRSNPATYTGV 717 Query 721 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ 780 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVC Sbjct 718 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCH 777 Query 781 GARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPA 840 GARYNRETLEVHYKGKT+++VLDM IEEAAEFFEPI +HRYL+TLV+VGLGYVRLGQPA Sbjct 778 GARYNRETLEVHYKGKTIAQVLDMPIEEAAEFFEPITSIHRYLKTLVEVGLGYVRLGQPA 837 Query 841 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIV 900 PTLSGGEAQRVKLA+ELQKRSTG+T+YILDEPTTGLHF+DIRKLL VINGLVDKGNTVIV Sbjct 838 PTLSGGEAQRVKLAAELQKRSTGKTIYILDEPTTGLHFEDIRKLLTVINGLVDKGNTVIV 897 Query 901 IEHNLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPEDVAAVPASYTGKFLAEVV 953 IEHNLDVIKTSDWIID+GPEGG+GGGTVVA+GTPE VA SYTG+FL +++ Sbjct 898 IEHNLDVIKTSDWIIDMGPEGGSGGGTVVAEGTPESVAQTAGSYTGEFLVDLL 950 >gi|226306787|ref|YP_002766747.1| UvrABC system protein A [Rhodococcus erythropolis PR4] gi|226185904|dbj|BAH34008.1| UvrABC system protein A [Rhodococcus erythropolis PR4] Length=986 Score = 1680 bits (4350), Expect = 0.0, Method: Compositional matrix adjust. Identities = 813/963 (85%), Positives = 897/963 (94%), Gaps = 3/963 (0%) Query 1 VADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 +ADRLIV+GAREHNLR VDLDLPRD+LIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA Sbjct 1 MADRLIVRGAREHNLRGVDLDLPRDSLIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 Query 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 120 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAG+ H Sbjct 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGSAH 120 Query 121 CPTCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV 180 CP CGE++ARQTPQQIVDQVL M EG +F VLAPVVRTRKGEF DLFD+LN QGYSRVRV Sbjct 121 CPVCGEKIARQTPQQIVDQVLEMEEGIKFQVLAPVVRTRKGEFVDLFDQLNTQGYSRVRV 180 Query 181 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDH 240 DGVVH L DPPKLKKQEKHDIEVVVDRL VKA++K+RLTDSVETAL LA+GIVVL+FVD Sbjct 181 DGVVHSLADPPKLKKQEKHDIEVVVDRLQVKASSKQRLTDSVETALRLAEGIVVLDFVDR 240 Query 241 ELGAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELVV 300 E AP RE+RFSEKLACPNGHALA+DDLEPRSFSFNSPYGACPEC+GLGIRKEVDP+LVV Sbjct 241 EENAPDRERRFSEKLACPNGHALAIDDLEPRSFSFNSPYGACPECTGLGIRKEVDPDLVV 300 Query 301 PDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGADE 360 PDPD +L GA+APWS G ++EYF R+++GLG+ LGFD+ TPW KLPAKARKAILEG++E Sbjct 301 PDPDLSLEDGAIAPWSMGQSSEYFGRLLSGLGDILGFDMKTPWNKLPAKARKAILEGSEE 360 Query 361 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRL 420 QVHVRY+NRYGRTRSYYA+FEGV+ FL R++ QTES+QMKERY+G+MRD PCP C G RL Sbjct 361 QVHVRYKNRYGRTRSYYAEFEGVMPFLHRRLEQTESDQMKERYDGYMRDTPCPACGGARL 420 Query 421 KPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSR 480 +PEIL+VT+A G+ G+KSIAEVCELSI+DCADFLN+LTLG RE+AIAGQVLKE+++R Sbjct 421 RPEILSVTIAA---GDFGSKSIAEVCELSISDCADFLNSLTLGSREEAIAGQVLKEVQAR 477 Query 481 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 540 LGFLLDVGLEYLSLSRAA TLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR Sbjct 478 LGFLLDVGLEYLSLSRAAGTLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 537 Query 541 LIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDS 600 LIETLTRLRDLGNTLIVVEHDEDTI +DW+VDIGP AGEHGG++VHSGPY+ELL ++S Sbjct 538 LIETLTRLRDLGNTLIVVEHDEDTIRTSDWVVDIGPYAGEHGGKVVHSGPYEELLTCEES 597 Query 601 ITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK 660 +TGAYLSGR IE+PAIRR VD +RQ+TVVGAREHNL GIDVSFPLGVLT+VTGVSGSGK Sbjct 598 LTGAYLSGRSFIEVPAIRRPVDRKRQVTVVGAREHNLDGIDVSFPLGVLTAVTGVSGSGK 657 Query 661 STLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGV 720 STLVNDILA V+AN+LNGARQVPGRHTR+ GLD LDKLV+VDQSPIGRTPRSN ATYTGV Sbjct 658 STLVNDILATVMANKLNGARQVPGRHTRINGLDQLDKLVQVDQSPIGRTPRSNAATYTGV 717 Query 721 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ 780 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEAC+GDGT+KIEMNFLPDVYVPCEVC Sbjct 718 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACSGDGTLKIEMNFLPDVYVPCEVCH 777 Query 781 GARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPA 840 GARYNRETLEVHYKGK+++EVLDM IEEAAEFF+P+ +HRYL+TLVDVGLGYVRLGQPA Sbjct 778 GARYNRETLEVHYKGKSIAEVLDMPIEEAAEFFQPVTSIHRYLKTLVDVGLGYVRLGQPA 837 Query 841 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIV 900 PTLSGGEAQRVKLA+ELQKRSTGRTVYILDEPTTGLHF+DIRKLL VINGLVDKGN+VIV Sbjct 838 PTLSGGEAQRVKLAAELQKRSTGRTVYILDEPTTGLHFEDIRKLLIVINGLVDKGNSVIV 897 Query 901 IEHNLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPEDVAAVPASYTGKFLAEVVGGGASAA 960 IEHNLDVIKTSDW++D+GPEGG+GGGTVVAQGTPEDVAAVP SYTGKFL+EV+ + A Sbjct 898 IEHNLDVIKTSDWVVDMGPEGGSGGGTVVAQGTPEDVAAVPESYTGKFLSEVLTAQHAPA 957 Query 961 TSR 963 ++ Sbjct 958 KAK 960 >gi|229492733|ref|ZP_04386534.1| excinuclease ABC subunit A [Rhodococcus erythropolis SK121] gi|229320392|gb|EEN86212.1| excinuclease ABC subunit A [Rhodococcus erythropolis SK121] Length=991 Score = 1679 bits (4348), Expect = 0.0, Method: Compositional matrix adjust. Identities = 812/953 (86%), Positives = 892/953 (94%), Gaps = 3/953 (0%) Query 1 VADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 VADRLIV+GAREHNLR VDLDLPRD+LIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA Sbjct 6 VADRLIVRGAREHNLRGVDLDLPRDSLIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 65 Query 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 120 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAG+ H Sbjct 66 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGSAH 125 Query 121 CPTCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV 180 CP CGE++ARQTPQQIVDQVL M EG +F VLAPVVRTRKGEF DLFD+LN QGYSRVRV Sbjct 126 CPVCGEKIARQTPQQIVDQVLEMEEGIKFQVLAPVVRTRKGEFVDLFDQLNTQGYSRVRV 185 Query 181 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDH 240 DGVVH L DPPKLKKQEKHDIEVVVDRL VKA++K+RLTDSVETAL LA+GIVVL+FVD Sbjct 186 DGVVHSLADPPKLKKQEKHDIEVVVDRLQVKASSKQRLTDSVETALRLAEGIVVLDFVDR 245 Query 241 ELGAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELVV 300 E A RE+RFSEKLACPNGHALA+DDLEPRSFSFNSPYGACPEC+GLGIRKEVDP+LVV Sbjct 246 EENALDRERRFSEKLACPNGHALAIDDLEPRSFSFNSPYGACPECTGLGIRKEVDPDLVV 305 Query 301 PDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGADE 360 PDPD +L GA+APWS G ++EYF R+++GLG+ LGFD+ TPW KLPAKARKAILEG++E Sbjct 306 PDPDLSLEDGAIAPWSMGQSSEYFGRLLSGLGDILGFDMKTPWNKLPAKARKAILEGSEE 365 Query 361 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRL 420 QVHVRY+NRYGRTRSYYA+FEGV+ FL R++ QTES+QMKERY+G+MRD PCP C G RL Sbjct 366 QVHVRYKNRYGRTRSYYAEFEGVMPFLHRRLEQTESDQMKERYDGYMRDTPCPACGGARL 425 Query 421 KPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSR 480 +PEIL+VT+A G+ G+KSIAEVCELSI+DCADFLN+LTLG RE+AIAGQVLKE+++R Sbjct 426 RPEILSVTIAA---GDFGSKSIAEVCELSISDCADFLNSLTLGSREEAIAGQVLKEVQAR 482 Query 481 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 540 LGFLLDVGLEYLSLSRAA TLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR Sbjct 483 LGFLLDVGLEYLSLSRAAGTLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 542 Query 541 LIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDS 600 LIETLTRLRDLGNTLIVVEHDEDTI +DW+VDIGP AGEHGG++VHSGPY+ELL ++S Sbjct 543 LIETLTRLRDLGNTLIVVEHDEDTIRTSDWVVDIGPYAGEHGGKVVHSGPYEELLTCEES 602 Query 601 ITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK 660 +TGAYLSGR IE+PAIRR VD +RQ+TVVGAREHNL GIDVSFPLGVLT+VTGVSGSGK Sbjct 603 LTGAYLSGRSFIEVPAIRRPVDRKRQVTVVGAREHNLDGIDVSFPLGVLTAVTGVSGSGK 662 Query 661 STLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGV 720 STLVNDILA V+AN+LNGARQVPGRHTR+ GLD LDKLV+VDQSPIGRTPRSN ATYTGV Sbjct 663 STLVNDILATVMANKLNGARQVPGRHTRINGLDQLDKLVQVDQSPIGRTPRSNAATYTGV 722 Query 721 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ 780 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEAC+GDGT+KIEMNFLPDVYVPCEVC Sbjct 723 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACSGDGTLKIEMNFLPDVYVPCEVCH 782 Query 781 GARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPA 840 GARYNRETLEVHYKGK+++EVLDM IEEAAEFF+P+ +HRYL+TLVDVGLGYVRLGQPA Sbjct 783 GARYNRETLEVHYKGKSIAEVLDMPIEEAAEFFQPVTSIHRYLKTLVDVGLGYVRLGQPA 842 Query 841 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIV 900 PTLSGGEAQRVKLA+ELQKRSTGRTVYILDEPTTGLHF+DIRKLL VINGLVDKGN+VIV Sbjct 843 PTLSGGEAQRVKLAAELQKRSTGRTVYILDEPTTGLHFEDIRKLLIVINGLVDKGNSVIV 902 Query 901 IEHNLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPEDVAAVPASYTGKFLAEVV 953 IEHNLDVIKTSDW++D+GPEGG+GGGTVVAQGTPEDVAAVP SYTGKFL+EV+ Sbjct 903 IEHNLDVIKTSDWVVDMGPEGGSGGGTVVAQGTPEDVAAVPESYTGKFLSEVL 955 >gi|111017983|ref|YP_700955.1| excinuclease ABC subunit A [Rhodococcus jostii RHA1] gi|110817513|gb|ABG92797.1| excision nuclease ABC subunit A (UvrA protein) [Rhodococcus jostii RHA1] Length=1003 Score = 1675 bits (4339), Expect = 0.0, Method: Compositional matrix adjust. Identities = 812/953 (86%), Positives = 892/953 (94%), Gaps = 3/953 (0%) Query 1 VADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 VADRLIV+GAREHNLR VDLDLPRD+LIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA Sbjct 6 VADRLIVRGAREHNLRGVDLDLPRDSLIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 65 Query 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 120 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGT H Sbjct 66 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTAH 125 Query 121 CPTCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV 180 CP CGE++ARQTPQQIVDQVL M EGTRF VLAPVVRTRKGEF DLFD+LN QGYSRVRV Sbjct 126 CPVCGEQIARQTPQQIVDQVLDMEEGTRFQVLAPVVRTRKGEFVDLFDQLNMQGYSRVRV 185 Query 181 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDH 240 DGVVHPL+DPPKLKKQEKHDIEVVVDRLTVKA++K+RLTDSVETAL LA+GIVVL+FVD Sbjct 186 DGVVHPLSDPPKLKKQEKHDIEVVVDRLTVKASSKQRLTDSVETALRLAEGIVVLDFVDR 245 Query 241 ELGAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELVV 300 E A RE+RFSEKLACPNGHAL++DDLEPRSFSFNSPYGACPEC+GLGIRKEVDP+LVV Sbjct 246 EENAADRERRFSEKLACPNGHALSIDDLEPRSFSFNSPYGACPECTGLGIRKEVDPDLVV 305 Query 301 PDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGADE 360 PDP+ +L GA+APWS G ++EYF R+++GLG+ LGFD+ TPW KLPAKAR+AILEG++E Sbjct 306 PDPELSLEDGAIAPWSMGQSSEYFGRLLSGLGDILGFDMKTPWNKLPAKARRAILEGSEE 365 Query 361 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRL 420 QVHVRY+NRYGRTRSYYA+FEGV+ FL R++ QTES+QMKERY+G+MRD PCP C G RL Sbjct 366 QVHVRYKNRYGRTRSYYAEFEGVMPFLHRRLEQTESDQMKERYDGYMRDTPCPACGGARL 425 Query 421 KPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSR 480 +PEIL+VT+A E + G KSIAEVCELSI+DCADFLN+LTLG RE+AIAGQVLKE+++R Sbjct 426 RPEILSVTIASE---KFGMKSIAEVCELSISDCADFLNSLTLGSREEAIAGQVLKEVQAR 482 Query 481 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 540 LGFLLDVGLEYLSL+RAA TLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR Sbjct 483 LGFLLDVGLEYLSLARAAGTLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 542 Query 541 LIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDS 600 LIETLTRLRDLGNTLIVVEHDEDTI +DW+VDIGP AGEHGG++VHSGPY+ELL ++S Sbjct 543 LIETLTRLRDLGNTLIVVEHDEDTIRTSDWVVDIGPLAGEHGGKVVHSGPYEELLDCEES 602 Query 601 ITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK 660 +TGAYLSGR IEIPAIRR VD +RQ+TV+GAREHNL GIDVSFPLGVLTSVTGVSGSGK Sbjct 603 LTGAYLSGRSHIEIPAIRRPVDRKRQVTVIGAREHNLGGIDVSFPLGVLTSVTGVSGSGK 662 Query 661 STLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGV 720 STLVNDILA V+AN+LNGARQVPGRHTR+ GLD LDKLV+VDQSPIGRTPRSN ATYTGV Sbjct 663 STLVNDILATVMANKLNGARQVPGRHTRINGLDQLDKLVQVDQSPIGRTPRSNAATYTGV 722 Query 721 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ 780 FDKIRTLFAATTE+KVRGYQPGRFSFNVKGGRCEAC+GDGT+KIEMNFLPDVYVPCEVC Sbjct 723 FDKIRTLFAATTESKVRGYQPGRFSFNVKGGRCEACSGDGTLKIEMNFLPDVYVPCEVCH 782 Query 781 GARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPA 840 GARYNRETLEVHYKGKT++EVLDM IEEAAEFFEPI +HRYL+TLV+VGLGYVRLGQPA Sbjct 783 GARYNRETLEVHYKGKTIAEVLDMPIEEAAEFFEPITSIHRYLKTLVEVGLGYVRLGQPA 842 Query 841 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIV 900 PTLSGGEAQRVKLA+ELQKRSTGRTVYILDEPTTGLHF+DIRKLL V+NGLVDKGNTVIV Sbjct 843 PTLSGGEAQRVKLAAELQKRSTGRTVYILDEPTTGLHFEDIRKLLGVVNGLVDKGNTVIV 902 Query 901 IEHNLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPEDVAAVPASYTGKFLAEVV 953 IEHNLDVIKTSDW+ID+GPEGG+GGGTVVAQGTPE+VA VP SYTG+FL V+ Sbjct 903 IEHNLDVIKTSDWVIDMGPEGGSGGGTVVAQGTPEEVAQVPESYTGRFLENVL 955 >gi|226360113|ref|YP_002777891.1| excinuclease ABC subunit A [Rhodococcus opacus B4] gi|226238598|dbj|BAH48946.1| UvrABC system protein A [Rhodococcus opacus B4] Length=997 Score = 1671 bits (4328), Expect = 0.0, Method: Compositional matrix adjust. Identities = 810/953 (85%), Positives = 890/953 (94%), Gaps = 3/953 (0%) Query 1 VADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 +ADRLIV+GAREHNLR VDLDLPRD+LIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA Sbjct 1 MADRLIVRGAREHNLRGVDLDLPRDSLIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 Query 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 120 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGT H Sbjct 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTAH 120 Query 121 CPTCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV 180 CP CGE++ARQTPQQIVDQVL M EGTRF VLAPVVRTRKGEF DLFD+LN QGYSRVRV Sbjct 121 CPVCGEQIARQTPQQIVDQVLEMEEGTRFQVLAPVVRTRKGEFVDLFDQLNMQGYSRVRV 180 Query 181 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDH 240 DGVV+PL++PPKLKKQEKHDIEVVVDRLTVKA +K+RLTDSVETAL LA+GIVVL+FVD Sbjct 181 DGVVYPLSEPPKLKKQEKHDIEVVVDRLTVKAGSKQRLTDSVETALRLAEGIVVLDFVDR 240 Query 241 ELGAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELVV 300 E A RE+RFSEKLACPNGHAL++DDLEPRSFSFNSPYGACPEC+GLGIRKEVDP+LVV Sbjct 241 EENAADRERRFSEKLACPNGHALSIDDLEPRSFSFNSPYGACPECTGLGIRKEVDPDLVV 300 Query 301 PDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGADE 360 PDP+ +L GA+APWS G ++EYF R+++GLG+ LGFD+ TPW KLPAKAR+AILEG++E Sbjct 301 PDPELSLGDGAIAPWSMGQSSEYFGRLLSGLGDILGFDMKTPWNKLPAKARRAILEGSEE 360 Query 361 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRL 420 QVHVRY+NRYGRTRSYYA+FEGV+ FL R++ QTES+QMKERY+G+MRD PCP C G RL Sbjct 361 QVHVRYKNRYGRTRSYYAEFEGVMPFLHRRLEQTESDQMKERYDGYMRDTPCPACGGARL 420 Query 421 KPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSR 480 +PEIL+VT+A E + G KSIAEVCELSI+DCADFLN+LTLG RE+AIAGQVLKE+++R Sbjct 421 RPEILSVTIANE---KFGMKSIAEVCELSISDCADFLNSLTLGSREEAIAGQVLKEVQAR 477 Query 481 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 540 LGFLLDVGLEYLSL+RAA TLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR Sbjct 478 LGFLLDVGLEYLSLARAAGTLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 537 Query 541 LIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDS 600 LIETLTRLRDLGNTLIVVEHDEDTI +DW+VDIGP AGEHGG++VHSGPY ELL ++S Sbjct 538 LIETLTRLRDLGNTLIVVEHDEDTIRTSDWVVDIGPLAGEHGGKVVHSGPYQELLDCEES 597 Query 601 ITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK 660 +TGAYLSGR IEIPAIRR VD +RQ+TVVGAREHNL GIDVSFPLGVLTSVTGVSGSGK Sbjct 598 LTGAYLSGRSHIEIPAIRRPVDRKRQVTVVGAREHNLGGIDVSFPLGVLTSVTGVSGSGK 657 Query 661 STLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGV 720 STLVNDILA V+AN+LNGARQVPGRHTR+ GLD LDKLV+VDQSPIGRTPRSN ATYTGV Sbjct 658 STLVNDILATVMANKLNGARQVPGRHTRINGLDQLDKLVQVDQSPIGRTPRSNAATYTGV 717 Query 721 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ 780 FDKIRTLFAATTE+KVRGYQPGRFSFNVKGGRCEAC+GDGT+KIEMNFLPDVYVPCEVC Sbjct 718 FDKIRTLFAATTESKVRGYQPGRFSFNVKGGRCEACSGDGTLKIEMNFLPDVYVPCEVCH 777 Query 781 GARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPA 840 GARYNRETLEVHYKGKT++EVLDM IEEAAEFFEPI +HRYL+TLV+VGLGYVRLGQPA Sbjct 778 GARYNRETLEVHYKGKTIAEVLDMPIEEAAEFFEPITSIHRYLKTLVEVGLGYVRLGQPA 837 Query 841 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIV 900 PTLSGGEAQRVKLA+ELQKRSTGRTVYILDEPTTGLHF+DIRKLL V+NGLVDKGNTVIV Sbjct 838 PTLSGGEAQRVKLAAELQKRSTGRTVYILDEPTTGLHFEDIRKLLGVVNGLVDKGNTVIV 897 Query 901 IEHNLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPEDVAAVPASYTGKFLAEVV 953 IEHNLDVIKTSDW++D+GPEGG+GGGTVVAQGTPEDVA VP SYTG+FL V+ Sbjct 898 IEHNLDVIKTSDWVVDMGPEGGSGGGTVVAQGTPEDVAQVPESYTGRFLENVL 950 >gi|325674236|ref|ZP_08153925.1| excision endonuclease subunit UvrA [Rhodococcus equi ATCC 33707] gi|325554916|gb|EGD24589.1| excision endonuclease subunit UvrA [Rhodococcus equi ATCC 33707] Length=990 Score = 1665 bits (4312), Expect = 0.0, Method: Compositional matrix adjust. Identities = 806/969 (84%), Positives = 899/969 (93%), Gaps = 5/969 (0%) Query 1 VADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 +ADRLIV+GAREHNLR ++LDLPRD+LIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA Sbjct 1 MADRLIVQGAREHNLRGINLDLPRDSLIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 Query 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 120 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGT H Sbjct 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTAH 120 Query 121 CPTCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV 180 CP CGE++ARQTPQQIVDQVL M EGT+F VLAPVVRTRKGEF DLF++LN QGYSRVRV Sbjct 121 CPVCGEQIARQTPQQIVDQVLDMEEGTKFQVLAPVVRTRKGEFVDLFEQLNTQGYSRVRV 180 Query 181 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDH 240 DGV+H LTDPPKLKKQEKHDIEVVVDRLTVKA+A++RLTDSVETAL LADGIVVL+FVD Sbjct 181 DGVIHQLTDPPKLKKQEKHDIEVVVDRLTVKASARQRLTDSVETALRLADGIVVLDFVDR 240 Query 241 ELGAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELVV 300 + AP RE+RFSEKLACPN H L++DDLEPRSFSFNSPYGACPEC+GLGIRKEVDP+LVV Sbjct 241 DEDAPDRERRFSEKLACPNAHPLSIDDLEPRSFSFNSPYGACPECTGLGIRKEVDPDLVV 300 Query 301 PDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGADE 360 PDP+ +L GA+APWS G ++EYF R+++GLG+ +GFD+ TPW KLPAKAR+AILEG+ E Sbjct 301 PDPELSLEDGAIAPWSMGQSSEYFGRLLSGLGDIMGFDMATPWNKLPAKARRAILEGSTE 360 Query 361 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRL 420 QVHVRY+NRYGRTRSYYA+FEGV+ FL R++ QTESEQMKERY+G+MRDVPCP C G RL Sbjct 361 QVHVRYKNRYGRTRSYYAEFEGVMPFLHRRLEQTESEQMKERYDGYMRDVPCPACDGARL 420 Query 421 KPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSR 480 +PEIL+VT++ E+ +G KSIA+VCELSIA+C+ FLN+LTLG RE+AIAGQVLKE+++R Sbjct 421 RPEILSVTISSET---YGQKSIAQVCELSIAECSAFLNSLTLGAREEAIAGQVLKEVQAR 477 Query 481 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 540 LGFLLDVGLEYLSL+RAA TLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR Sbjct 478 LGFLLDVGLEYLSLARAAGTLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 537 Query 541 LIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDS 600 LIETLTRLRDLGNTLIVVEHDEDTI +DW+VDIGP AGEHGGR+VHSG Y ELL N +S Sbjct 538 LIETLTRLRDLGNTLIVVEHDEDTIRTSDWVVDIGPLAGEHGGRVVHSGTYKELLDNTES 597 Query 601 ITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK 660 +TGAYLSGR IE+PA RR+VD +RQ+TVVGARE+NL GIDVSFPLGVLTSVTGVSGSGK Sbjct 598 LTGAYLSGRSVIEVPAERRAVDRKRQITVVGARENNLAGIDVSFPLGVLTSVTGVSGSGK 657 Query 661 STLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGV 720 STLVNDILA V+AN+LNGARQVPGRHTR+ GLD LDKLV+VDQSPIGRTPRSN ATYTGV Sbjct 658 STLVNDILATVMANKLNGARQVPGRHTRINGLDQLDKLVQVDQSPIGRTPRSNAATYTGV 717 Query 721 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ 780 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEAC+GDGT+KIEMNFLPDVYVPCEVC Sbjct 718 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACSGDGTLKIEMNFLPDVYVPCEVCH 777 Query 781 GARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPA 840 GARYNRETLEVHYKGKT++EVLDM IEEAAEFFEP+ +HRYL+TLV+VGLGYVRLGQPA Sbjct 778 GARYNRETLEVHYKGKTIAEVLDMPIEEAAEFFEPVTSIHRYLKTLVEVGLGYVRLGQPA 837 Query 841 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIV 900 PTLSGGEAQRVKLA+ELQKRSTGRTVY+LDEPTTGLHF+DIRKLL V+NGLVDKGNTVIV Sbjct 838 PTLSGGEAQRVKLAAELQKRSTGRTVYVLDEPTTGLHFEDIRKLLKVVNGLVDKGNTVIV 897 Query 901 IEHNLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPEDVAAVPASYTGKFLAEVVGGGASAA 960 IEHNLDVIKTSDW+ID+GPEGG+GGGTVVA+GTPEDVAAVP SYTG+FL EV+ A +A Sbjct 898 IEHNLDVIKTSDWVIDMGPEGGSGGGTVVAEGTPEDVAAVPGSYTGRFLEEVL--SAPSA 955 Query 961 TSRSNRRRN 969 T+ + R++ Sbjct 956 TNGAAPRKS 964 >gi|312139885|ref|YP_004007221.1| excinuclease ABC subunit a uvra2 [Rhodococcus equi 103S] gi|311889224|emb|CBH48538.1| excinuclease ABC subunit A UvrA2 [Rhodococcus equi 103S] Length=990 Score = 1664 bits (4309), Expect = 0.0, Method: Compositional matrix adjust. Identities = 802/953 (85%), Positives = 889/953 (94%), Gaps = 3/953 (0%) Query 1 VADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 +ADRLIV+GAREHNLR ++LDLPRD+LIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA Sbjct 1 MADRLIVQGAREHNLRGINLDLPRDSLIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 Query 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 120 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGT H Sbjct 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTAH 120 Query 121 CPTCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV 180 CP CGE++ARQTPQQIVDQVL M EGT+F VLAPVVRTRKGEF DLF++LN QGYSRVRV Sbjct 121 CPVCGEQIARQTPQQIVDQVLDMEEGTKFQVLAPVVRTRKGEFVDLFEQLNTQGYSRVRV 180 Query 181 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDH 240 DGV+H LTDPPKLKKQEKHDIEVVVDRLTVKA+AK+RLTDSVETAL LADGIVVL+FVD Sbjct 181 DGVIHQLTDPPKLKKQEKHDIEVVVDRLTVKASAKQRLTDSVETALRLADGIVVLDFVDR 240 Query 241 ELGAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELVV 300 + AP RE+RFSEKLACPN H L++DDLEPRSFSFNSPYGACPEC+GLGIRKEVDP+LVV Sbjct 241 DEDAPDRERRFSEKLACPNAHPLSIDDLEPRSFSFNSPYGACPECTGLGIRKEVDPDLVV 300 Query 301 PDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGADE 360 PDP+ +L GA+APWS G ++EYF R+++GLG+ +GFD+ TPW KLPAKAR+AILEG+ E Sbjct 301 PDPELSLEDGAIAPWSMGQSSEYFGRLLSGLGDIMGFDMATPWNKLPAKARRAILEGSTE 360 Query 361 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRL 420 QVHVRY+NRYGRTRSYYA+FEGV+ FL R++ QTESEQMKERY+G+MRDVPCP C G RL Sbjct 361 QVHVRYKNRYGRTRSYYAEFEGVMPFLHRRLEQTESEQMKERYDGYMRDVPCPACDGARL 420 Query 421 KPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSR 480 +PEIL+VT++ E+ +G KSIA+V ELSIA+C+ FLN+LTLG RE+AIAGQVLKE+++R Sbjct 421 RPEILSVTISSET---YGQKSIAQVSELSIAECSAFLNSLTLGAREEAIAGQVLKEVQAR 477 Query 481 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 540 LGFLLDVGLEYLSL+RAA TLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR Sbjct 478 LGFLLDVGLEYLSLARAAGTLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 537 Query 541 LIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDS 600 LIETLTRLRDLGNTLIVVEHDEDTI +DW+VDIGP AGEHGGR+VHSG Y ELL N +S Sbjct 538 LIETLTRLRDLGNTLIVVEHDEDTIRTSDWVVDIGPLAGEHGGRVVHSGTYKELLDNTES 597 Query 601 ITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK 660 +TGAYLSGR IE+PA RR+VD +RQ+TVVGARE+NL GIDVSFPLGVLTSVTGVSGSGK Sbjct 598 LTGAYLSGRSVIEVPAERRAVDRKRQITVVGARENNLAGIDVSFPLGVLTSVTGVSGSGK 657 Query 661 STLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGV 720 STLVNDILA V+AN+LNGARQVPGRHTR+ GLD LDKLV+VDQSPIGRTPRSN ATYTGV Sbjct 658 STLVNDILATVMANKLNGARQVPGRHTRINGLDQLDKLVQVDQSPIGRTPRSNAATYTGV 717 Query 721 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ 780 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEAC+GDGT+KIEMNFLPDVYVPCEVC Sbjct 718 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACSGDGTLKIEMNFLPDVYVPCEVCH 777 Query 781 GARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPA 840 GARYNRETLEVHYKGKT++EVLDM IEEAAEFFEP+ +HRYL+TLV+VGLGYVRLGQPA Sbjct 778 GARYNRETLEVHYKGKTIAEVLDMPIEEAAEFFEPVTSIHRYLKTLVEVGLGYVRLGQPA 837 Query 841 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIV 900 PTLSGGEAQRVKLA+ELQKRSTGRTVY+LDEPTTGLHF+DIRKLL V+NGLVDKGNTVIV Sbjct 838 PTLSGGEAQRVKLAAELQKRSTGRTVYVLDEPTTGLHFEDIRKLLKVVNGLVDKGNTVIV 897 Query 901 IEHNLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPEDVAAVPASYTGKFLAEVV 953 IEHNLDVIKTSDW+ID+GPEGG+GGGTVVA+GTPEDVAAVP SYTG+FL EV+ Sbjct 898 IEHNLDVIKTSDWVIDMGPEGGSGGGTVVAEGTPEDVAAVPGSYTGRFLEEVL 950 >gi|161598443|ref|YP_118121.2| excinuclease ABC subunit A [Nocardia farcinica IFM 10152] Length=1008 Score = 1655 bits (4286), Expect = 0.0, Method: Compositional matrix adjust. Identities = 800/954 (84%), Positives = 881/954 (93%), Gaps = 4/954 (0%) Query 1 VADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 +A+RL V+GAREHNL+ VDLDLPRD++IVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA Sbjct 1 MAERLTVRGAREHNLKGVDLDLPRDSMIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 Query 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 120 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH Sbjct 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 120 Query 121 CPTCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV 180 CP CG +A+QTPQQIVDQVL MPEGT+F VLAPVVRTRKGEF DLFD+LN QGYSRVRV Sbjct 121 CPVCGHLIAKQTPQQIVDQVLEMPEGTKFQVLAPVVRTRKGEFVDLFDQLNTQGYSRVRV 180 Query 181 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDH 240 DGVV+PLTDPPKLKKQEKHD+EVVVDRLTVK ++K+RLTDS+ETAL LADGIVVL+FVD Sbjct 181 DGVVYPLTDPPKLKKQEKHDVEVVVDRLTVKPSSKQRLTDSIETALRLADGIVVLDFVDR 240 Query 241 ELGAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELVV 300 + A RE+RFSE+LACPNGH L ++DLEPRSFSFNSPYGACP+C+GLGIRKEVDP+LVV Sbjct 241 DENAHDRERRFSERLACPNGHPLDIEDLEPRSFSFNSPYGACPDCAGLGIRKEVDPDLVV 300 Query 301 PDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGADE 360 PDP+ +LA+GA+APWS G TAEYFTR++ GL EA+GF +DTPW+ LPAKARKA+LEG+ + Sbjct 301 PDPELSLAEGAIAPWSRGQTAEYFTRLLTGLAEAIGFSMDTPWKDLPAKARKAVLEGSSD 360 Query 361 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRL 420 QVHV Y NRYGR RSYYADFEGV+ FL R+M TESEQMKE YEG+MRD+PCPVC G RL Sbjct 361 QVHVSYTNRYGRKRSYYADFEGVMPFLHRRMDNTESEQMKEHYEGYMRDIPCPVCKGARL 420 Query 421 KPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSR 480 +PEILAVTLA S+ KSIAEV +LSI DC+ FLN LTLG RE AIAGQVLKE+++R Sbjct 421 RPEILAVTLAAGSE----KKSIAEVSDLSIGDCSAFLNGLTLGEREAAIAGQVLKEVQAR 476 Query 481 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 540 LGFLLDVGLEYL+LSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR Sbjct 477 LGFLLDVGLEYLTLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 536 Query 541 LIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDS 600 LIETLTRL++LGNTLIVVEHDEDTI +DW+VDIGP AGEHGGR+VHSGPY +LL N DS Sbjct 537 LIETLTRLKNLGNTLIVVEHDEDTIRASDWVVDIGPLAGEHGGRVVHSGPYPDLLANTDS 596 Query 601 ITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK 660 +TGAYL+G + IE+P +RR +D +R+LTVVGA EHNL+GIDVSFPLGVLTSVTGVSGSGK Sbjct 597 LTGAYLAGHKRIEVPMVRRPIDRKRKLTVVGATEHNLKGIDVSFPLGVLTSVTGVSGSGK 656 Query 661 STLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGV 720 STLVNDILA VLAN+LNGARQVPGRHTRV GLD LDKLVRVDQSPIGRTPRSNPATYTGV Sbjct 657 STLVNDILATVLANKLNGARQVPGRHTRVNGLDQLDKLVRVDQSPIGRTPRSNPATYTGV 716 Query 721 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ 780 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEAC+GDGT+KIEMNFLPDVYVPCEVC Sbjct 717 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACSGDGTLKIEMNFLPDVYVPCEVCH 776 Query 781 GARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPA 840 GARYNRETLEVHYKGKT++EVLDM IEEAAEFFEP+ +HRYL+TLVDVGLGYVRLGQPA Sbjct 777 GARYNRETLEVHYKGKTIAEVLDMPIEEAAEFFEPVTSIHRYLKTLVDVGLGYVRLGQPA 836 Query 841 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIV 900 PTLSGGEAQRVKLA+ELQKRS GRT+YILDEPTTGLHF+DIRKLL VINGLVDKGNTVIV Sbjct 837 PTLSGGEAQRVKLAAELQKRSAGRTIYILDEPTTGLHFEDIRKLLAVINGLVDKGNTVIV 896 Query 901 IEHNLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPEDVAAVPASYTGKFLAEVVG 954 IEHNLDVIKTSDW+ID+GPEGG+GGGTVVA+GTPEDVAAVP SYTG+FL EV+ Sbjct 897 IEHNLDVIKTSDWVIDMGPEGGSGGGTVVAEGTPEDVAAVPDSYTGQFLKEVLA 950 >gi|296140124|ref|YP_003647367.1| excinuclease ABC subunit A [Tsukamurella paurometabola DSM 20162] gi|296028258|gb|ADG79028.1| excinuclease ABC, A subunit [Tsukamurella paurometabola DSM 20162] Length=952 Score = 1621 bits (4198), Expect = 0.0, Method: Compositional matrix adjust. Identities = 779/954 (82%), Positives = 877/954 (92%), Gaps = 3/954 (0%) Query 1 VADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 +ADRLIV+GAREHNLR +D+DLPRD+LIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA Sbjct 1 MADRLIVRGAREHNLRGIDVDLPRDSLIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 Query 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 120 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH Sbjct 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 120 Query 121 CPTCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV 180 CP CG +ARQTPQQIVDQVL M +GTRF VLAPVVRTRKGEF DLF++L QGY+R R+ Sbjct 121 CPECGSVIARQTPQQIVDQVLDMEQGTRFQVLAPVVRTRKGEFVDLFNQLQTQGYARARI 180 Query 181 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDH 240 DGVV+ L++PPKLKKQEKHDIEVVVDRL VKA++K+RLTDS+ETAL LADGIVVL+FVD Sbjct 181 DGVVYQLSEPPKLKKQEKHDIEVVVDRLAVKASSKQRLTDSIETALRLADGIVVLDFVDR 240 Query 241 ELGAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELVV 300 E P RE+RFSEK+ACPNGH +AVDDLEPRSFSFNSPYGACPEC GLG+RKEVDP+LVV Sbjct 241 EENDPERERRFSEKMACPNGHPIAVDDLEPRSFSFNSPYGACPECDGLGVRKEVDPDLVV 300 Query 301 PDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGADE 360 PDP+ +LA+GA+APW++G TA+YF R+++GL +A+GFD+DTPW+ LPAKARKA++EG++ Sbjct 301 PDPELSLAEGAIAPWASGQTADYFLRLLSGLADAMGFDLDTPWKSLPAKARKAVIEGSEH 360 Query 361 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRL 420 QVHV+Y+NRYGRTRSYYA+FEGV+ FL R++ TESEQMKERYEG+MRDVPCPVC G RL Sbjct 361 QVHVKYKNRYGRTRSYYAEFEGVMPFLHRRLESTESEQMKERYEGYMRDVPCPVCQGARL 420 Query 421 KPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSR 480 +PEILAVTL GE KSIA+V +S+ +C+D+L+ L LG RE AIAG+VLKE+++R Sbjct 421 RPEILAVTLDHPRFGE---KSIADVAAMSVGECSDYLSDLKLGAREAAIAGRVLKEVQAR 477 Query 481 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 540 + FLLDVGLEYLSLSRAA +LSGGEAQRIRLATQIGSGL GVLYVLDEPSIGLHQRDNRR Sbjct 478 IDFLLDVGLEYLSLSRAAGSLSGGEAQRIRLATQIGSGLAGVLYVLDEPSIGLHQRDNRR 537 Query 541 LIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDS 600 LI+TL RLRDLGNTLIVVEHDEDTI ADW+VDIGP AGEHGG++VHSG Y LL+NK+S Sbjct 538 LIDTLVRLRDLGNTLIVVEHDEDTIRTADWVVDIGPYAGEHGGKVVHSGTYKALLKNKES 597 Query 601 ITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK 660 +TGAYLSGR ++ +PA+RR +D +RQL VVGAREHNL+GIDVSFPLGVLT+VTGVSGSGK Sbjct 598 LTGAYLSGRRALPVPAVRRPIDKKRQLKVVGAREHNLQGIDVSFPLGVLTAVTGVSGSGK 657 Query 661 STLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGV 720 STLVNDILA VLAN+LNGARQVPGRH+RVTGLD LDKLV+VDQSPIGRTPRSNPATYTGV Sbjct 658 STLVNDILATVLANKLNGARQVPGRHSRVTGLDDLDKLVQVDQSPIGRTPRSNPATYTGV 717 Query 721 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ 780 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEAC+GDGTIKIEMNFLPDVYVPCEVC Sbjct 718 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACSGDGTIKIEMNFLPDVYVPCEVCH 777 Query 781 GARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPA 840 GARYNRETLEVHYKGK ++EVLDM IEEAA+FFE + +HRYL+TLV+VGLGYVRLGQPA Sbjct 778 GARYNRETLEVHYKGKNIAEVLDMPIEEAADFFEAVTSIHRYLKTLVEVGLGYVRLGQPA 837 Query 841 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIV 900 TLSGGEAQRVKLA+ELQKRS GRTVYILDEPTTGLHF+DI KLL VI+GLVDKGN+VIV Sbjct 838 TTLSGGEAQRVKLAAELQKRSNGRTVYILDEPTTGLHFEDIAKLLQVIDGLVDKGNSVIV 897 Query 901 IEHNLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPEDVAAVPASYTGKFLAEVVG 954 IEHNLDVIKT+DWI+D+GPEGG+GGGTVVAQGTPEDVAAVP SYTGKFLAEV+ Sbjct 898 IEHNLDVIKTADWIVDMGPEGGSGGGTVVAQGTPEDVAAVPESYTGKFLAEVLA 951 >gi|333919168|ref|YP_004492749.1| Excinuclease ABC subunit A [Amycolicicoccus subflavus DQS3-9A1] gi|333481389|gb|AEF39949.1| Excinuclease ABC subunit A [Amycolicicoccus subflavus DQS3-9A1] Length=1004 Score = 1616 bits (4185), Expect = 0.0, Method: Compositional matrix adjust. Identities = 778/955 (82%), Positives = 877/955 (92%), Gaps = 3/955 (0%) Query 1 VADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 +ADRL+V+GAREHNLR +DLDLPRD+LIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA Sbjct 1 MADRLVVRGAREHNLRGIDLDLPRDSLIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 Query 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 120 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLL+ARAGTP+ Sbjct 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLFARAGTPY 120 Query 121 CPTCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV 180 CP CGE++ARQTPQQIVDQVL M GTRF VLAPVVRTRKGEF +LF +L+++G++RVRV Sbjct 121 CPACGEKIARQTPQQIVDQVLEMESGTRFQVLAPVVRTRKGEFVELFSQLSSEGFARVRV 180 Query 181 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDH 240 DG V+PLTDPP LKKQEKHDIEVVVDRL VK +AK+RLTDSVETAL LADGIVVL+FVD Sbjct 181 DGTVYPLTDPPTLKKQEKHDIEVVVDRLVVKDSAKQRLTDSVETALRLADGIVVLDFVDR 240 Query 241 ELGAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELVV 300 + A R++RFSE+LACPNGHALA+DDLEPRSFSFNSPYGACPEC GLGIRKEVDP+LVV Sbjct 241 DESASDRQRRFSERLACPNGHALAIDDLEPRSFSFNSPYGACPECHGLGIRKEVDPDLVV 300 Query 301 PDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGADE 360 PDP+ +LA GA+APWS+G +AEYFTR++ GLG+A+GF ++TPWR+LPAKA+KA+LEG++ Sbjct 301 PDPELSLADGAIAPWSSGQSAEYFTRLLKGLGDAMGFTLETPWRRLPAKAKKAVLEGSEH 360 Query 361 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRL 420 QVHVRY NRYGRTRSYYA+FEGV+ FLQR++ QTES+QMK+RYEGFMRD PCP C G RL Sbjct 361 QVHVRYTNRYGRTRSYYAEFEGVMPFLQRRLDQTESDQMKDRYEGFMRDTPCPACNGARL 420 Query 421 KPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSR 480 +PEIL+V + G G+ A+SIAEVCELSI++CA +LN+L LG RE AIAG+VL+E+++R Sbjct 421 RPEILSVRIPG---GDGQARSIAEVCELSISECAQYLNSLELGAREAAIAGRVLREVQAR 477 Query 481 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 540 LGFLLDVGL+YLSL RAA TLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR Sbjct 478 LGFLLDVGLDYLSLDRAAGTLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 537 Query 541 LIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDS 600 LI+TLTRLRDLGNTLIVVEHDEDTI +DWIVDIGP AGEHGG +VHSG + ELL N +S Sbjct 538 LIDTLTRLRDLGNTLIVVEHDEDTIRTSDWIVDIGPRAGEHGGEVVHSGTFAELLENSNS 597 Query 601 ITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK 660 +TGAYL+GR IE P +RR +D +R+LTVVGAREHNLR I+V FPLG L ++TGVSGSGK Sbjct 598 LTGAYLAGRLQIETPMVRRPIDRKRKLTVVGAREHNLRDIEVDFPLGALLAITGVSGSGK 657 Query 661 STLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGV 720 STLVN+ILA LAN+LNGAR VPGRHTR+ G+D LDKLV+VDQSPIGRTPRSNPATYTGV Sbjct 658 STLVNEILAKTLANKLNGARHVPGRHTRIKGVDNLDKLVQVDQSPIGRTPRSNPATYTGV 717 Query 721 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ 780 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVC Sbjct 718 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCH 777 Query 781 GARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPA 840 GARYNRETLEVHYKG+ ++EVLDMSIEEAA+FFEP+ +HRYL+TLV+VGLGYVRLGQ A Sbjct 778 GARYNRETLEVHYKGRNIAEVLDMSIEEAADFFEPVTSIHRYLKTLVEVGLGYVRLGQSA 837 Query 841 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIV 900 PTLSGGEAQRVKLA+ELQKRSTGRT+YILDEPTTGLHF+DIRKLL VINGLVDKGNTVIV Sbjct 838 PTLSGGEAQRVKLAAELQKRSTGRTIYILDEPTTGLHFEDIRKLLKVINGLVDKGNTVIV 897 Query 901 IEHNLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPEDVAAVPASYTGKFLAEVVGG 955 IEHNLDVIKT+DWIID+GPEGG+GGG VVAQGTPEDVAA+ SYTG FLAE++GG Sbjct 898 IEHNLDVIKTADWIIDMGPEGGSGGGIVVAQGTPEDVAAMEESYTGGFLAELLGG 952 >gi|262202749|ref|YP_003273957.1| excinuclease ABC subunit A [Gordonia bronchialis DSM 43247] gi|262086096|gb|ACY22064.1| excinuclease ABC, A subunit [Gordonia bronchialis DSM 43247] Length=960 Score = 1613 bits (4178), Expect = 0.0, Method: Compositional matrix adjust. Identities = 778/962 (81%), Positives = 876/962 (92%), Gaps = 3/962 (0%) Query 1 VADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 + DRLIV+GAREHNLR +D+DLPRD+LIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA Sbjct 1 MVDRLIVRGAREHNLRGIDVDLPRDSLIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 Query 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 120 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAG H Sbjct 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGRAH 120 Query 121 CPTCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV 180 CP CGE +A+QTPQQIVDQ+L M +GTRF VLAPVVRTRKGEF DLF +L QG++R R+ Sbjct 121 CPVCGELIAKQTPQQIVDQILDMDQGTRFQVLAPVVRTRKGEFVDLFAELQTQGFARARI 180 Query 181 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDH 240 DGV++ L+DPPKLKKQEKHDIEVVVDRL VKA+AK+R+TDSVETAL LADGI+VL+FVD Sbjct 181 DGVIYQLSDPPKLKKQEKHDIEVVVDRLVVKASAKQRMTDSVETALRLADGILVLDFVDL 240 Query 241 ELGAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELVV 300 + P RE+RFSE++ACPNGH +A+DDLEPRSFSFNSPYGACPEC GLG+RKEVD +LVV Sbjct 241 DEDDPDRERRFSERMACPNGHPIAIDDLEPRSFSFNSPYGACPECDGLGVRKEVDEDLVV 300 Query 301 PDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGADE 360 PDP+ +LA GA+APWS GH A+YF R+++GL + +GFDV+TPWRKLP KAR+A+L G+D Sbjct 301 PDPELSLADGAIAPWSGGHNADYFLRLISGLADQMGFDVNTPWRKLPVKARRALLNGSDH 360 Query 361 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRL 420 QVHV++RNRYGRTRSYY +FEGV+AFL R+M QTESEQMKERYEG+MRDVPCP C G RL Sbjct 361 QVHVKFRNRYGRTRSYYTEFEGVMAFLSRRMDQTESEQMKERYEGYMRDVPCPACDGARL 420 Query 421 KPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSR 480 +PEILAVTL + +GA SIAEVC LS+A+CAD+LN L L R+ AIAG+VLKE+++R Sbjct 421 RPEILAVTLDHPT---YGAYSIAEVCALSVAECADYLNGLELDERQAAIAGRVLKEVQAR 477 Query 481 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 540 + FLLDVGLEYLSLSRAA +LSGGEAQRIRLATQIGSGL GVLYVLDEPSIGLHQRDNRR Sbjct 478 IRFLLDVGLEYLSLSRAAGSLSGGEAQRIRLATQIGSGLAGVLYVLDEPSIGLHQRDNRR 537 Query 541 LIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDS 600 LI+TLTRLRDLGNTLIVVEHDEDTI ADWIVDIGP AGEHGG +VHSG Y +LL+N+ S Sbjct 538 LIDTLTRLRDLGNTLIVVEHDEDTIRSADWIVDIGPRAGEHGGEVVHSGSYKDLLKNRRS 597 Query 601 ITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK 660 +TGAYLSGR+ + +PAIRR + ++QLTVVGAREHNLRGIDV FPLGVLT+VTGVSGSGK Sbjct 598 LTGAYLSGRDVLPVPAIRRPISRKKQLTVVGAREHNLRGIDVEFPLGVLTAVTGVSGSGK 657 Query 661 STLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGV 720 STLVNDILA VLAN+LNGARQVPGRHTRV GLD+LDKLV+VDQSPIGRTPRSNPATYTGV Sbjct 658 STLVNDILATVLANKLNGARQVPGRHTRVKGLDHLDKLVQVDQSPIGRTPRSNPATYTGV 717 Query 721 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ 780 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEAC G+GTIKIEMNFLPDVYVPCEVC Sbjct 718 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACAGEGTIKIEMNFLPDVYVPCEVCH 777 Query 781 GARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPA 840 GARYNRETLEVHYKGKT+SEVLDM IEEAAEFFEP+ +HRYL+TLVDVGLGYVRLGQPA Sbjct 778 GARYNRETLEVHYKGKTISEVLDMPIEEAAEFFEPVTSIHRYLKTLVDVGLGYVRLGQPA 837 Query 841 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIV 900 PTLSGGEAQRVKL++ELQKRSTGRTVYILDEPTTGLHF+DI+KLL+VINGLVDKGNTVIV Sbjct 838 PTLSGGEAQRVKLSAELQKRSTGRTVYILDEPTTGLHFEDIKKLLDVINGLVDKGNTVIV 897 Query 901 IEHNLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPEDVAAVPASYTGKFLAEVVGGGASAA 960 IEHNLDVIKT+DWIID+GPEGG+GGG VVA+GTPED+A P S+TGKFLAE++ + A Sbjct 898 IEHNLDVIKTADWIIDMGPEGGSGGGMVVAEGTPEDIAVEPDSHTGKFLAEILDVDEAVA 957 Query 961 TS 962 ++ Sbjct 958 SA 959 >gi|54015387|dbj|BAD56757.1| putative excision nuclease ABC subunit A [Nocardia farcinica IFM 10152] Length=982 Score = 1613 bits (4178), Expect = 0.0, Method: Compositional matrix adjust. Identities = 781/928 (85%), Positives = 857/928 (93%), Gaps = 4/928 (0%) Query 27 LIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSAYARQFLGQMDKPDVDFIEGLSPAVSI 86 +IVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSAYARQFLGQMDKPDVDFIEGLSPAVSI Sbjct 1 MIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSAYARQFLGQMDKPDVDFIEGLSPAVSI 60 Query 87 DQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPHCPTCGERVARQTPQQIVDQVLAMPEG 146 DQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPHCP CG +A+QTPQQIVDQVL MPEG Sbjct 61 DQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPHCPVCGHLIAKQTPQQIVDQVLEMPEG 120 Query 147 TRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRVDGVVHPLTDPPKLKKQEKHDIEVVVD 206 T+F VLAPVVRTRKGEF DLFD+LN QGYSRVRVDGVV+PLTDPPKLKKQEKHD+EVVVD Sbjct 121 TKFQVLAPVVRTRKGEFVDLFDQLNTQGYSRVRVDGVVYPLTDPPKLKKQEKHDVEVVVD 180 Query 207 RLTVKAAAKRRLTDSVETALNLADGIVVLEFVDHELGAPHREQRFSEKLACPNGHALAVD 266 RLTVK ++K+RLTDS+ETAL LADGIVVL+FVD + A RE+RFSE+LACPNGH L ++ Sbjct 181 RLTVKPSSKQRLTDSIETALRLADGIVVLDFVDRDENAHDRERRFSERLACPNGHPLDIE 240 Query 267 DLEPRSFSFNSPYGACPECSGLGIRKEVDPELVVPDPDRTLAQGAVAPWSNGHTAEYFTR 326 DLEPRSFSFNSPYGACP+C+GLGIRKEVDP+LVVPDP+ +LA+GA+APWS G TAEYFTR Sbjct 241 DLEPRSFSFNSPYGACPDCAGLGIRKEVDPDLVVPDPELSLAEGAIAPWSRGQTAEYFTR 300 Query 327 MMAGLGEALGFDVDTPWRKLPAKARKAILEGADEQVHVRYRNRYGRTRSYYADFEGVLAF 386 ++ GL EA+GF +DTPW+ LPAKARKA+LEG+ +QVHV Y NRYGR RSYYADFEGV+ F Sbjct 301 LLTGLAEAIGFSMDTPWKDLPAKARKAVLEGSSDQVHVSYTNRYGRKRSYYADFEGVMPF 360 Query 387 LQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRLKPEILAVTLAGESKGEHGAKSIAEVC 446 L R+M TESEQMKE YEG+MRD+PCPVC G RL+PEILAVTLA S+ KSIAEV Sbjct 361 LHRRMDNTESEQMKEHYEGYMRDIPCPVCKGARLRPEILAVTLAAGSE----KKSIAEVS 416 Query 447 ELSIADCADFLNALTLGPREQAIAGQVLKEIRSRLGFLLDVGLEYLSLSRAAATLSGGEA 506 +LSI DC+ FLN LTLG RE AIAGQVLKE+++RLGFLLDVGLEYL+LSRAAATLSGGEA Sbjct 417 DLSIGDCSAFLNGLTLGEREAAIAGQVLKEVQARLGFLLDVGLEYLTLSRAAATLSGGEA 476 Query 507 QRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRRLIETLTRLRDLGNTLIVVEHDEDTIE 566 QRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRRLIETLTRL++LGNTLIVVEHDEDTI Sbjct 477 QRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRRLIETLTRLKNLGNTLIVVEHDEDTIR 536 Query 567 HADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDSITGAYLSGRESIEIPAIRRSVDPRRQ 626 +DW+VDIGP AGEHGGR+VHSGPY +LL N DS+TGAYL+G + IE+P +RR +D +R+ Sbjct 537 ASDWVVDIGPLAGEHGGRVVHSGPYPDLLANTDSLTGAYLAGHKRIEVPMVRRPIDRKRK 596 Query 627 LTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGKSTLVNDILAAVLANRLNGARQVPGRH 686 LTVVGA EHNL+GIDVSFPLGVLTSVTGVSGSGKSTLVNDILA VLAN+LNGARQVPGRH Sbjct 597 LTVVGATEHNLKGIDVSFPLGVLTSVTGVSGSGKSTLVNDILATVLANKLNGARQVPGRH 656 Query 687 TRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGVFDKIRTLFAATTEAKVRGYQPGRFSF 746 TRV GLD LDKLVRVDQSPIGRTPRSNPATYTGVFDKIRTLFAATTEAKVRGYQPGRFSF Sbjct 657 TRVNGLDQLDKLVRVDQSPIGRTPRSNPATYTGVFDKIRTLFAATTEAKVRGYQPGRFSF 716 Query 747 NVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQGARYNRETLEVHYKGKTVSEVLDMSI 806 NVKGGRCEAC+GDGT+KIEMNFLPDVYVPCEVC GARYNRETLEVHYKGKT++EVLDM I Sbjct 717 NVKGGRCEACSGDGTLKIEMNFLPDVYVPCEVCHGARYNRETLEVHYKGKTIAEVLDMPI 776 Query 807 EEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPAPTLSGGEAQRVKLASELQKRSTGRTV 866 EEAAEFFEP+ +HRYL+TLVDVGLGYVRLGQPAPTLSGGEAQRVKLA+ELQKRS GRT+ Sbjct 777 EEAAEFFEPVTSIHRYLKTLVDVGLGYVRLGQPAPTLSGGEAQRVKLAAELQKRSAGRTI 836 Query 867 YILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIVIEHNLDVIKTSDWIIDLGPEGGAGGG 926 YILDEPTTGLHF+DIRKLL VINGLVDKGNTVIVIEHNLDVIKTSDW+ID+GPEGG+GGG Sbjct 837 YILDEPTTGLHFEDIRKLLAVINGLVDKGNTVIVIEHNLDVIKTSDWVIDMGPEGGSGGG 896 Query 927 TVVAQGTPEDVAAVPASYTGKFLAEVVG 954 TVVA+GTPEDVAAVP SYTG+FL EV+ Sbjct 897 TVVAEGTPEDVAAVPDSYTGQFLKEVLA 924 Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 44/114 (39%), Positives = 61/114 (54%), Gaps = 13/114 (11%) Query 4 RLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFD---TIFAEGQRRYVESLSA 60 +L V GA EHNL+ +D+ P L TG+SGSGKS+L D T+ A L+ Sbjct 596 KLTVVGATEHNLKGIDVSFPLGVLTSVTGVSGSGKSTLVNDILATVLA-------NKLNG 648 Query 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYA 114 ARQ G+ + V+ ++ L V +DQ R PRS T T V+D +R L+A Sbjct 649 -ARQVPGRHTR--VNGLDQLDKLVRVDQSPIGRTPRSNPATYTGVFDKIRTLFA 699 >gi|134101817|ref|YP_001107478.1| excinuclease ABC subunit A [Saccharopolyspora erythraea NRRL 2338] gi|291009220|ref|ZP_06567193.1| excinuclease ABC subunit A [Saccharopolyspora erythraea NRRL 2338] gi|133914440|emb|CAM04553.1| excinuclease ABC subunit A [Saccharopolyspora erythraea NRRL 2338] Length=953 Score = 1594 bits (4128), Expect = 0.0, Method: Compositional matrix adjust. Identities = 768/956 (81%), Positives = 864/956 (91%), Gaps = 3/956 (0%) Query 1 VADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 +ADRL+V+GAREHNLR +DLDLPRD+LIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA Sbjct 1 MADRLVVRGAREHNLRGIDLDLPRDSLIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 Query 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 120 YARQFLGQMDKPDVDFIEGLSPAVSIDQKST+RNPRSTVGTITEVYDYLRLLYARAG PH Sbjct 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTSRNPRSTVGTITEVYDYLRLLYARAGKPH 120 Query 121 CPTCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV 180 CP CGE +++QTPQQIVDQVLAMPE T+F VLAPVVR+RKGE+ DLF+KL +QGY+R RV Sbjct 121 CPVCGEAISKQTPQQIVDQVLAMPERTKFQVLAPVVRSRKGEYVDLFEKLQSQGYARARV 180 Query 181 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDH 240 DGVVHPL +PPKLKKQEKHDIEVV+DRLTVK AK+RLTDSVETAL LADG+V+LEFVD Sbjct 181 DGVVHPLENPPKLKKQEKHDIEVVIDRLTVKPTAKQRLTDSVETALRLADGLVLLEFVDA 240 Query 241 ELGAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELVV 300 E PHRE++FSE LACPNGH L VD+LEPRSFSFNSPYGACP+C+GLGIRKEVDPELVV Sbjct 241 EENDPHRERKFSENLACPNGHPLGVDELEPRSFSFNSPYGACPDCAGLGIRKEVDPELVV 300 Query 301 PDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGADE 360 PD + +L +GA+APW+ GHTAEYFTR++ L EA+GF +DTPW +LP K +KA+L G ++ Sbjct 301 PDEELSLEEGAIAPWAGGHTAEYFTRLLTSLSEAIGFRMDTPWNRLPTKVKKAVLHGTND 360 Query 361 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRL 420 QVHVRY+NRYGRTRSYYA++EGV+ FL+R++ QTES+ +E+YEG+MRDVPCP C GTRL Sbjct 361 QVHVRYKNRYGRTRSYYANYEGVIPFLERRLEQTESDYAREKYEGYMRDVPCPACDGTRL 420 Query 421 KPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSR 480 KPEILAVT+ G GE SIAEV LS+ +CADFLN L LGPRE+ IAG+VLKE+++R Sbjct 421 KPEILAVTMEGAETGE---MSIAEVSALSVRECADFLNGLVLGPREEMIAGRVLKEVQAR 477 Query 481 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 540 LGFLLDVGL+YLSL RAA TLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDN R Sbjct 478 LGFLLDVGLDYLSLDRAAGTLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNHR 537 Query 541 LIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDS 600 L+ETL+RLRDLGNTLIVVEHDEDT+ ADWIVDIGPGAGEHGG++VHSGPY ELL N+ S Sbjct 538 LLETLSRLRDLGNTLIVVEHDEDTVRSADWIVDIGPGAGEHGGQVVHSGPYKELLDNEAS 597 Query 601 ITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK 660 ITG YL+ R+ I +P RR DP+RQLTVVGAREHNL IDVSFPLG L +VTGVSGSGK Sbjct 598 ITGDYLARRKHIPLPETRRRNDPKRQLTVVGAREHNLHRIDVSFPLGCLVAVTGVSGSGK 657 Query 661 STLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGV 720 STLVNDILA+VLAN+LNGARQVPGRHTRV GL +DKLV+VDQSPIGRTPRSNPATYTGV Sbjct 658 STLVNDILASVLANKLNGARQVPGRHTRVNGLGNVDKLVQVDQSPIGRTPRSNPATYTGV 717 Query 721 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ 780 FD IR LFAATTEAKVRGYQPGRFSFNVKGGRCEAC GDGT+KIEMNFLPDVYVPCEVC+ Sbjct 718 FDHIRKLFAATTEAKVRGYQPGRFSFNVKGGRCEACAGDGTLKIEMNFLPDVYVPCEVCK 777 Query 781 GARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPA 840 GARYNRETLEVHYKGKT++EVLD+ IEEAAEFF+PI +HR+LRTLVDVGLGYVRLGQPA Sbjct 778 GARYNRETLEVHYKGKTIAEVLDLPIEEAAEFFKPINAIHRHLRTLVDVGLGYVRLGQPA 837 Query 841 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIV 900 PTLSGGEAQRVKLASELQKRSTG+TVYILDEPTTGLHF+DIRKLL V+N LVDKGNTVIV Sbjct 838 PTLSGGEAQRVKLASELQKRSTGKTVYILDEPTTGLHFEDIRKLLGVVNSLVDKGNTVIV 897 Query 901 IEHNLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPEDVAAVPASYTGKFLAEVVGGG 956 IEHNLDVIKT+DW++D+GPEGG GGG ++A+GTPE+VA V SYTG+FLA ++ G Sbjct 898 IEHNLDVIKTADWVLDMGPEGGNGGGELIAEGTPEEVAEVEDSYTGRFLAPILAEG 953 >gi|326382693|ref|ZP_08204384.1| excinuclease ABC subunit A [Gordonia neofelifaecis NRRL B-59395] gi|326198812|gb|EGD55995.1| excinuclease ABC subunit A [Gordonia neofelifaecis NRRL B-59395] Length=952 Score = 1590 bits (4116), Expect = 0.0, Method: Compositional matrix adjust. Identities = 770/953 (81%), Positives = 855/953 (90%), Gaps = 3/953 (0%) Query 1 VADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 + DRLIV+GAREHNLR +D+DLPRD+LIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA Sbjct 1 MVDRLIVRGAREHNLRGIDVDLPRDSLIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 Query 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 120 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGT H Sbjct 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTAH 120 Query 121 CPTCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV 180 CP CGER+ RQTPQQIVDQVLAM EG RF VLAPVVR+RKGEF DLF +L QG++R V Sbjct 121 CPVCGERIERQTPQQIVDQVLAMEEGVRFQVLAPVVRSRKGEFVDLFAELQVQGFARAMV 180 Query 181 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDH 240 DG VH L DPPKLKKQEKHDI+VVVDRL VK +A++RLTDSVETAL LADGI+VL+FVD Sbjct 181 DGAVHQLADPPKLKKQEKHDIDVVVDRLVVKPSARQRLTDSVETALRLADGILVLDFVDV 240 Query 241 ELGAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELVV 300 + P R +RFSEK+ACPN H +A+DDLEPRSFSFNSP+GACPEC GLG+RKEVD LVV Sbjct 241 DESDPQRRRRFSEKMACPNSHPIAIDDLEPRSFSFNSPFGACPECDGLGVRKEVDESLVV 300 Query 301 PDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGADE 360 PDPD TL +GA+APWS GH A+YF R++ GLG+ +GFD+DTPW LP ARKA+L G+D Sbjct 301 PDPDLTLREGAIAPWSTGHNADYFLRLIEGLGDQMGFDLDTPWESLPRTARKALLNGSDH 360 Query 361 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRL 420 QVHV++RNRYGRTRSYY +FEGV+AFL R+ TESEQMK+RYEG+MRDV CP C G RL Sbjct 361 QVHVKFRNRYGRTRSYYTEFEGVMAFLSRRAETTESEQMKDRYEGYMRDVACPACNGARL 420 Query 421 KPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSR 480 +PEIL+VTL HG KSIA+V LS+A+CAD+LN L LG RE AIAG+VLKE+++R Sbjct 421 RPEILSVTL---DHPVHGPKSIADVTSLSVAECADYLNGLQLGEREAAIAGRVLKEVQAR 477 Query 481 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 540 + FLLDVGLEYLSLSRAA +LSGGEAQRIRLATQIG+GL GVLYVLDEPSIGLHQRDNRR Sbjct 478 ITFLLDVGLEYLSLSRAAGSLSGGEAQRIRLATQIGAGLAGVLYVLDEPSIGLHQRDNRR 537 Query 541 LIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDS 600 LI+TL RLRDLGNTLIVVEHDEDTI ADWIVDIGP AGEHGGR+VHSG Y ELL N +S Sbjct 538 LIDTLVRLRDLGNTLIVVEHDEDTIRAADWIVDIGPRAGEHGGRVVHSGSYAELLANPES 597 Query 601 ITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK 660 ITGAYLS RE + +PAIRR +D +RQLTV+GA E+NL+GIDVSFPLGVLT+VTGVSGSGK Sbjct 598 ITGAYLSRREVLPVPAIRRPIDKKRQLTVIGATENNLKGIDVSFPLGVLTTVTGVSGSGK 657 Query 661 STLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGV 720 STLVNDILA VLAN+LNGARQVPG H R+ GL++LDKLV+VDQSPIGRTPRSNPATYTGV Sbjct 658 STLVNDILATVLANKLNGARQVPGHHKRIKGLEHLDKLVQVDQSPIGRTPRSNPATYTGV 717 Query 721 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ 780 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEAC G+GTIKIEMNFLPDVYVPCEVC Sbjct 718 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACMGEGTIKIEMNFLPDVYVPCEVCH 777 Query 781 GARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPA 840 GARYNRETLEVHYKGKT++EVLDM IEEAAEFFEP+ +HRYL+TLVDVGLGYVRLGQPA Sbjct 778 GARYNRETLEVHYKGKTIAEVLDMPIEEAAEFFEPVTSIHRYLKTLVDVGLGYVRLGQPA 837 Query 841 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIV 900 PTLSGGEAQRVKLA+ELQKRSTGRTVYILDEPTTGLHF+DIRKLL VINGLVDKGNTVIV Sbjct 838 PTLSGGEAQRVKLAAELQKRSTGRTVYILDEPTTGLHFEDIRKLLLVINGLVDKGNTVIV 897 Query 901 IEHNLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPEDVAAVPASYTGKFLAEVV 953 IEHNLDVIKT+DWI+D+GPEGG+GGGTVVAQGTPE VAA PAS+TG F+ E++ Sbjct 898 IEHNLDVIKTADWIVDMGPEGGSGGGTVVAQGTPEQVAATPASHTGTFVKELL 950 >gi|302528072|ref|ZP_07280414.1| excinuclease ABC, A subunit [Streptomyces sp. AA4] gi|302436967|gb|EFL08783.1| excinuclease ABC, A subunit [Streptomyces sp. AA4] Length=953 Score = 1586 bits (4107), Expect = 0.0, Method: Compositional matrix adjust. Identities = 775/953 (82%), Positives = 857/953 (90%), Gaps = 3/953 (0%) Query 1 VADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 +ADRL+V+GAREHNLR VDLDLPRD++IVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA Sbjct 1 MADRLVVRGAREHNLRGVDLDLPRDSMIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 Query 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 120 YARQFLGQMDKPDVDFIEGLSPAVSIDQKST+RNPRSTVGTITEVYDYLRLLYARAG H Sbjct 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTSRNPRSTVGTITEVYDYLRLLYARAGKAH 120 Query 121 CPTCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV 180 CP CGE +++QTPQQIVDQVL M EGTRF VLAPVVR RKGE+ DLF L QGY+RV V Sbjct 121 CPKCGEAISKQTPQQIVDQVLEMTEGTRFQVLAPVVRGRKGEYLDLFQNLQQQGYARVVV 180 Query 181 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDH 240 DG VHPLTDPPKLKKQEKH I VV+DRL VK +A++RLTDSVETAL LADG+V LEFVD Sbjct 181 DGTVHPLTDPPKLKKQEKHQIGVVIDRLAVKTSARQRLTDSVETALRLADGLVELEFVDL 240 Query 241 ELGAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELVV 300 + PHR + FSE LACPNGH LA++DLEPRSFSFNSPYGACPEC+G+GIRKEVDPELVV Sbjct 241 DENDPHRVRGFSENLACPNGHPLAIEDLEPRSFSFNSPYGACPECTGIGIRKEVDPELVV 300 Query 301 PDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGADE 360 PD + +LA+GA+APW+ G +A+YF R++ L EA+GF +DTPWR+LPA+ +KA+L G DE Sbjct 301 PDDELSLAEGAIAPWAGGQSADYFLRLLESLSEAVGFRMDTPWRRLPARVQKAVLHGVDE 360 Query 361 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRL 420 QVHVRYRNRYGR RSYYA FEGV+ FL+R++ QT+SE M+ERYEG+MR+VPCP C GTRL Sbjct 361 QVHVRYRNRYGRQRSYYAAFEGVIPFLERRLEQTDSEYMRERYEGYMREVPCPACQGTRL 420 Query 421 KPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSR 480 KPEILAVTL ++G+ +SIAEVC LSIA+ ++FL+ L LGPRE IAG VLKEI++R Sbjct 421 KPEILAVTLEHATQGD---RSIAEVCALSIAEASEFLDELVLGPREAMIAGAVLKEIQAR 477 Query 481 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 540 L FLLDVGL YLSL RA+ TLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDN R Sbjct 478 LRFLLDVGLTYLSLDRASGTLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNHR 537 Query 541 LIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDS 600 LIETLTRLR+LGNTLIVVEHDEDTI +DW+VDIGPGAGEHGG IVHSGPY ++L+NKDS Sbjct 538 LIETLTRLRNLGNTLIVVEHDEDTIRASDWVVDIGPGAGEHGGHIVHSGPYKKILKNKDS 597 Query 601 ITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK 660 ITGAYLSGR IE+PAIRR VD +RQLTVVGAREHNLRGIDVSFPLG L SVTGVSGSGK Sbjct 598 ITGAYLSGRRRIEVPAIRRPVDKKRQLTVVGAREHNLRGIDVSFPLGCLVSVTGVSGSGK 657 Query 661 STLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGV 720 STLVNDILA VLAN+LNGARQVPGRHTRV GL +DKLVRVDQSPIGRTPRSNPATYTGV Sbjct 658 STLVNDILAQVLANKLNGARQVPGRHTRVNGLGNVDKLVRVDQSPIGRTPRSNPATYTGV 717 Query 721 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ 780 +D +R LFAATTEAKVRGYQ GRFSFNVKGGRCEAC GDGTIKIEMNFLPDVYVPCEVC+ Sbjct 718 WDHVRKLFAATTEAKVRGYQQGRFSFNVKGGRCEACAGDGTIKIEMNFLPDVYVPCEVCK 777 Query 781 GARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPA 840 GARYNRETLEVHYKGKTVS+VLDM IEEAAEFFEPI +HR+L+TLVDVGLGYVRLGQPA Sbjct 778 GARYNRETLEVHYKGKTVSDVLDMPIEEAAEFFEPIKAIHRHLQTLVDVGLGYVRLGQPA 837 Query 841 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIV 900 PTLSGGEAQRVKLASELQKRSTG+TVYILDEPTTGLHF+DI KL+ VINGLVDKGNTVIV Sbjct 838 PTLSGGEAQRVKLASELQKRSTGKTVYILDEPTTGLHFEDISKLIGVINGLVDKGNTVIV 897 Query 901 IEHNLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPEDVAAVPASYTGKFLAEVV 953 IEHNLDVIKTSDWIID+GPEGG+GGG VVA+GTPE VAA SYTG+FL +V+ Sbjct 898 IEHNLDVIKTSDWIIDMGPEGGSGGGMVVAEGTPEQVAATEGSYTGEFLTQVL 950 >gi|343928318|ref|ZP_08767770.1| UvrABC system protein A [Gordonia alkanivorans NBRC 16433] gi|343761788|dbj|GAA14696.1| UvrABC system protein A [Gordonia alkanivorans NBRC 16433] Length=932 Score = 1585 bits (4105), Expect = 0.0, Method: Compositional matrix adjust. Identities = 763/925 (83%), Positives = 846/925 (92%), Gaps = 3/925 (0%) Query 29 VFTGLSGSGKSSLAFDTIFAEGQRRYVESLSAYARQFLGQMDKPDVDFIEGLSPAVSIDQ 88 +FTGLSGSGKSSLAFDTIFAEGQRRYVESLSAYARQFLGQMDKPDVDFIEGLSPAVSIDQ Sbjct 1 MFTGLSGSGKSSLAFDTIFAEGQRRYVESLSAYARQFLGQMDKPDVDFIEGLSPAVSIDQ 60 Query 89 KSTNRNPRSTVGTITEVYDYLRLLYARAGTPHCPTCGERVARQTPQQIVDQVLAMPEGTR 148 KSTNRNPRSTVGTITEVYDYLRLLYARAG HCP CGE +A+QTPQQIVDQVLAM EGTR Sbjct 61 KSTNRNPRSTVGTITEVYDYLRLLYARAGKAHCPICGEAIAKQTPQQIVDQVLAMEEGTR 120 Query 149 FLVLAPVVRTRKGEFADLFDKLNAQGYSRVRVDGVVHPLTDPPKLKKQEKHDIEVVVDRL 208 F VLAPVVRTRKGEF DLF +L QG+SR R+DGVVH LTDPPKLKKQEKHDIEVVVDRL Sbjct 121 FQVLAPVVRTRKGEFVDLFAELQTQGFSRARIDGVVHQLTDPPKLKKQEKHDIEVVVDRL 180 Query 209 TVKAAAKRRLTDSVETALNLADGIVVLEFVDHELGAPHREQRFSEKLACPNGHALAVDDL 268 VKA AK+RLTDSVET L LADGI+VL+FVD E P+RE+RFSEK+ACPN H +A+DDL Sbjct 181 VVKAGAKQRLTDSVETGLRLADGIIVLDFVDLEEDDPNRERRFSEKMACPNAHPIAIDDL 240 Query 269 EPRSFSFNSPYGACPECSGLGIRKEVDPELVVPDPDRTLAQGAVAPWSNGHTAEYFTRMM 328 EPRSFSFNSPYGACPEC GLGIRKEVD ELVVPDP+ +LA+GA+APWS GH A+YF R+M Sbjct 241 EPRSFSFNSPYGACPECDGLGIRKEVDEELVVPDPEMSLAEGAIAPWSTGHNADYFLRLM 300 Query 329 AGLGEALGFDVDTPWRKLPAKARKAILEGADEQVHVRYRNRYGRTRSYYADFEGVLAFLQ 388 +GL + +GFD++TPW+KLP KAR+A+L G+D QVHV++RNRYGRTRSYY +FEGV++FL Sbjct 301 SGLADQMGFDINTPWKKLPVKARRALLNGSDHQVHVKFRNRYGRTRSYYTEFEGVMSFLA 360 Query 389 RKMSQTESEQMKERYEGFMRDVPCPVCAGTRLKPEILAVTLAGESKGEHGAKSIAEVCEL 448 R+M QTESEQMKERYEG+MRDVPCP C G RL+PEILAVTL E+G KSIAEVC L Sbjct 361 RRMDQTESEQMKERYEGYMRDVPCPACQGARLRPEILAVTL---DHPEYGPKSIAEVCAL 417 Query 449 SIADCADFLNALTLGPREQAIAGQVLKEIRSRLGFLLDVGLEYLSLSRAAATLSGGEAQR 508 S+ADCA+FL+ L L R+ AIAG+VLKE+++R+ FLLDVGLEYLSLSRAA +LSGGEAQR Sbjct 418 SVADCANFLDNLHLDERQAAIAGRVLKEVQARIRFLLDVGLEYLSLSRAAGSLSGGEAQR 477 Query 509 IRLATQIGSGLVGVLYVLDEPSIGLHQRDNRRLIETLTRLRDLGNTLIVVEHDEDTIEHA 568 IRLATQIGSGL GVLYVLDEPSIGLHQRDNRRLIETLTRLRDLGNTLIVVEHDEDTI A Sbjct 478 IRLATQIGSGLAGVLYVLDEPSIGLHQRDNRRLIETLTRLRDLGNTLIVVEHDEDTIRSA 537 Query 569 DWIVDIGPGAGEHGGRIVHSGPYDELLRNKDSITGAYLSGRESIEIPAIRRSVDPRRQLT 628 DWIVDIGP AGEHGG +VHSG Y +LL+N+ S+TGAYLSGR+S+ +P IRR +D +RQLT Sbjct 538 DWIVDIGPRAGEHGGHVVHSGSYKDLLKNRQSLTGAYLSGRDSLPVPEIRRPIDRKRQLT 597 Query 629 VVGAREHNLRGIDVSFPLGVLTSVTGVSGSGKSTLVNDILAAVLANRLNGARQVPGRHTR 688 VVGAREHNLRGI+VSFPLGV+T+VTGVSGSGKSTLVNDILA VLAN+LNGARQVPGRHTR Sbjct 598 VVGAREHNLRGIEVSFPLGVMTAVTGVSGSGKSTLVNDILATVLANKLNGARQVPGRHTR 657 Query 689 VTGLDYLDKLVRVDQSPIGRTPRSNPATYTGVFDKIRTLFAATTEAKVRGYQPGRFSFNV 748 + GLD LDKLV+VDQSPIGRTPRSNPATYTGVFDKIRTLFAATTEAKVRGYQPGRFSFNV Sbjct 658 IKGLDNLDKLVQVDQSPIGRTPRSNPATYTGVFDKIRTLFAATTEAKVRGYQPGRFSFNV 717 Query 749 KGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQGARYNRETLEVHYKGKTVSEVLDMSIEE 808 KGGRCEACTG+GTIKIEMNFLPDVYVPCEVC GARYNRETLEVHYKGKT++EVLDM IEE Sbjct 718 KGGRCEACTGEGTIKIEMNFLPDVYVPCEVCHGARYNRETLEVHYKGKTIAEVLDMPIEE 777 Query 809 AAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPAPTLSGGEAQRVKLASELQKRSTGRTVYI 868 AA+FFEP+A +HRYL+TL DVGLGYVRLGQPAPTLSGGEAQRVKLA+ELQKRS GRTVYI Sbjct 778 AADFFEPVASIHRYLKTLNDVGLGYVRLGQPAPTLSGGEAQRVKLAAELQKRSMGRTVYI 837 Query 869 LDEPTTGLHFDDIRKLLNVINGLVDKGNTVIVIEHNLDVIKTSDWIIDLGPEGGAGGGTV 928 LDEPTTGLHF+DI+KLL VINGLVDKGNTVI IEHNLDVIKT+DW+ID+GPEGG+GGGTV Sbjct 838 LDEPTTGLHFEDIKKLLAVINGLVDKGNTVITIEHNLDVIKTADWVIDMGPEGGSGGGTV 897 Query 929 VAQGTPEDVAAVPASYTGKFLAEVV 953 VA+GTPED+A P S+TGKFLAE++ Sbjct 898 VAEGTPEDIAVAPGSHTGKFLAEIL 922 Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 43/114 (38%), Positives = 61/114 (54%), Gaps = 13/114 (11%) Query 4 RLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFD---TIFAEGQRRYVESLSA 60 +L V GAREHNLR +++ P + TG+SGSGKS+L D T+ A L+ Sbjct 595 QLTVVGAREHNLRGIEVSFPLGVMTAVTGVSGSGKSTLVNDILATVLA-------NKLNG 647 Query 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYA 114 ARQ G+ + + ++ L V +DQ R PRS T T V+D +R L+A Sbjct 648 -ARQVPGRHTR--IKGLDNLDKLVQVDQSPIGRTPRSNPATYTGVFDKIRTLFA 698 >gi|340529506|gb|AEK44711.1| excinuclease ABC subunit A [Amycolatopsis mediterranei S699] Length=954 Score = 1580 bits (4092), Expect = 0.0, Method: Compositional matrix adjust. Identities = 769/953 (81%), Positives = 857/953 (90%), Gaps = 3/953 (0%) Query 1 VADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 +ADRL+V+GAREHNLR VDLDLPRD+LIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA Sbjct 1 MADRLVVRGAREHNLRGVDLDLPRDSLIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 Query 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 120 YARQFLGQMDKPDVDFIEGLSPAVSIDQKST+RNPRSTVGTITEVYDYLRLLYARAG H Sbjct 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTSRNPRSTVGTITEVYDYLRLLYARAGKAH 120 Query 121 CPTCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV 180 CPTCGE +++QTPQQIVDQVL M EG RF VLAPVVR RKGE+ DLF+ L QGY+RV V Sbjct 121 CPTCGEPISKQTPQQIVDQVLEMDEGVRFQVLAPVVRGRKGEYVDLFENLQQQGYARVVV 180 Query 181 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDH 240 DG +HPLTDPPKLKKQEKH I VV+DRL+VK+++++RLTDSVETAL LADG++ LEFVD Sbjct 181 DGTMHPLTDPPKLKKQEKHQIGVVIDRLSVKSSSRQRLTDSVETALRLADGLIELEFVDL 240 Query 241 ELGAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELVV 300 PHR + FSE LACPNGH LA++DLEPRSFSFNSPYGACPEC+G+GIRKEVDPELVV Sbjct 241 PENDPHRIRGFSENLACPNGHPLAIEDLEPRSFSFNSPYGACPECTGIGIRKEVDPELVV 300 Query 301 PDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGADE 360 PD + +LA+GA+APWS G +A+YF R++ L E +GF +DTPWR+LPA+A+KA+L G DE Sbjct 301 PDDELSLAEGAIAPWSGGQSADYFIRLLESLSETIGFRMDTPWRRLPARAQKAVLHGVDE 360 Query 361 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRL 420 QVHVRY+NRYGR RSYYA FEGV+ FL+R+ QTESE M+ERYEG+MR+VPCP C GTRL Sbjct 361 QVHVRYKNRYGRQRSYYAAFEGVIPFLERRQEQTESEYMRERYEGYMREVPCPACQGTRL 420 Query 421 KPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSR 480 KPEILAVTLA +++G+ SIAEVC LSIA+ + FL+ L LG RE IAG VLKEI++R Sbjct 421 KPEILAVTLAHKTRGD---MSIAEVCALSIAEASQFLDELELGQREAMIAGAVLKEIQAR 477 Query 481 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 540 L FLLDVGL YLSL RA+ATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDN R Sbjct 478 LRFLLDVGLTYLSLDRASATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNHR 537 Query 541 LIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDS 600 LIETLTRLR+LGNTLIVVEHDEDTI +DW+VDIGPGAGEHGG IVHSGPY +LL++KDS Sbjct 538 LIETLTRLRNLGNTLIVVEHDEDTIRSSDWVVDIGPGAGEHGGHIVHSGPYKKLLKSKDS 597 Query 601 ITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK 660 +TG YLSGR IE+PAIRR +D +RQLTVVGAREHNLRG+DVSFPLG L SVTGVSGSGK Sbjct 598 LTGQYLSGRRKIEVPAIRRPIDKKRQLTVVGAREHNLRGLDVSFPLGCLVSVTGVSGSGK 657 Query 661 STLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGV 720 STLVNDILA VLAN+LNGARQVPGRHTRV GL+ +DKLVRVDQSPIGRTPRSNPATYTGV Sbjct 658 STLVNDILATVLANKLNGARQVPGRHTRVNGLNNVDKLVRVDQSPIGRTPRSNPATYTGV 717 Query 721 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ 780 +D +R LFAATTEAKVRGYQ GRFSFNVKGGRCEAC GDGTIKIEMNFLPDVYVPCEVC+ Sbjct 718 WDHVRKLFAATTEAKVRGYQQGRFSFNVKGGRCEACAGDGTIKIEMNFLPDVYVPCEVCK 777 Query 781 GARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPA 840 GARYNRETLEVHYKGKTVS+VLDM IEEAAEFFEPI +HR+L+TLVDVGLGYVRLGQPA Sbjct 778 GARYNRETLEVHYKGKTVSDVLDMPIEEAAEFFEPIKAIHRHLQTLVDVGLGYVRLGQPA 837 Query 841 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIV 900 PTLSGGEAQRVKLASELQKRSTG+TVYILDEPTTGLHF+DI KL+ VINGLVDKGN+VIV Sbjct 838 PTLSGGEAQRVKLASELQKRSTGKTVYILDEPTTGLHFEDINKLIGVINGLVDKGNSVIV 897 Query 901 IEHNLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPEDVAAVPASYTGKFLAEVV 953 IEHNLDVIKTSDWIID+GPEGG+GGG +VA+GTPE VA V SYTG+FL V+ Sbjct 898 IEHNLDVIKTSDWIIDMGPEGGSGGGQIVAEGTPEHVAEVEGSYTGEFLRTVL 950 >gi|257056561|ref|YP_003134393.1| excinuclease ABC subunit A [Saccharomonospora viridis DSM 43017] gi|256586433|gb|ACU97566.1| Excinuclease ABC subunit A [Saccharomonospora viridis DSM 43017] Length=953 Score = 1578 bits (4087), Expect = 0.0, Method: Compositional matrix adjust. Identities = 771/956 (81%), Positives = 859/956 (90%), Gaps = 3/956 (0%) Query 1 VADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 +ADRL+++GAREHNLR VDLDLPRD+LIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA Sbjct 1 MADRLVIRGAREHNLRGVDLDLPRDSLIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 Query 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 120 YARQFLGQMDKPDV+FIEGLSPAVSIDQKST+RNPRSTVGTITEVYDYLRLLYARAG PH Sbjct 61 YARQFLGQMDKPDVEFIEGLSPAVSIDQKSTSRNPRSTVGTITEVYDYLRLLYARAGKPH 120 Query 121 CPTCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV 180 CP CGE +++QTPQQIVDQVL + EGTRF V+APVVR RKGE+ DLF L QGY+RVRV Sbjct 121 CPRCGEPISKQTPQQIVDQVLELEEGTRFQVIAPVVRGRKGEYVDLFANLQQQGYARVRV 180 Query 181 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDH 240 DGVVH L+DPPKLKKQEKHDI VVVDRLTVKA+AK+RLTDS+ETAL LADG+V LEFVD Sbjct 181 DGVVHRLSDPPKLKKQEKHDIGVVVDRLTVKASAKQRLTDSIETALRLADGLVELEFVDL 240 Query 241 ELGAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELVV 300 PHR + FSE LACPNGHAL ++D EPRSFSFN+PYGACPEC+G+GIRKEVDPE+VV Sbjct 241 PEDDPHRVRGFSEHLACPNGHALEIEDFEPRSFSFNAPYGACPECTGIGIRKEVDPEMVV 300 Query 301 PDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGADE 360 PD + +LA+GA+APWS G +AEYF R++ L LGF +DTPWRKLPA+ +KAIL G DE Sbjct 301 PDEELSLAEGAIAPWSGGQSAEYFQRLLESLSTTLGFRMDTPWRKLPARVQKAILYGVDE 360 Query 361 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRL 420 QVHVRYRNRYGR RSYYA FEGV+ F++R+ QTESE +ERYEG+MR++PCP C GTRL Sbjct 361 QVHVRYRNRYGRERSYYATFEGVIPFVERRHEQTESEWARERYEGYMREIPCPACQGTRL 420 Query 421 KPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSR 480 KPEILAVTL E E+G +SIAEVC LS+A+ + FL+ L LGPRE IAG VLKEI++R Sbjct 421 KPEILAVTLEHE---EYGERSIAEVCALSVAEASKFLDGLKLGPREAMIAGAVLKEIQAR 477 Query 481 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 540 L FLLDVGL+YLSL RAA TLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDN R Sbjct 478 LRFLLDVGLDYLSLDRAAGTLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNHR 537 Query 541 LIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDS 600 LIETLT+LRDLGNTLIVVEHDEDTI +DW+VDIGPGAG+HGGRIVHSGP+++LLRNK S Sbjct 538 LIETLTKLRDLGNTLIVVEHDEDTIRASDWVVDIGPGAGQHGGRIVHSGPFEKLLRNKKS 597 Query 601 ITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK 660 +TG YL+GR+ I +PA RR VD +RQLTVVGARE+NLR IDVSFPLG L SVTGVSGSGK Sbjct 598 LTGDYLAGRKEIALPATRRPVDRKRQLTVVGARENNLRNIDVSFPLGCLISVTGVSGSGK 657 Query 661 STLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGV 720 STLVNDILA VLAN+LN ARQVPGRH RV GL ++DKLVRVDQSPIGRTPRSNPATYTGV Sbjct 658 STLVNDILATVLANKLNNARQVPGRHKRVNGLQHVDKLVRVDQSPIGRTPRSNPATYTGV 717 Query 721 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ 780 +D IR LFA+TTEAKVRGYQPGRFSFNVKGGRCEAC GDGTIKIEMNFLPDVYVPCEVC+ Sbjct 718 WDHIRKLFASTTEAKVRGYQPGRFSFNVKGGRCEACAGDGTIKIEMNFLPDVYVPCEVCK 777 Query 781 GARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPA 840 GARYNRETLEVHYKGKTV+EVLDM IEEAAEFFEPI +HR+L+TLVDVGLGYVRLGQPA Sbjct 778 GARYNRETLEVHYKGKTVAEVLDMPIEEAAEFFEPIKAIHRHLQTLVDVGLGYVRLGQPA 837 Query 841 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIV 900 PTLSGGEAQRVKLASELQKRSTG+TVYILDEPTTGLHF+DIR+LL+VI+GLVDKGNTVIV Sbjct 838 PTLSGGEAQRVKLASELQKRSTGKTVYILDEPTTGLHFEDIRRLLDVIHGLVDKGNTVIV 897 Query 901 IEHNLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPEDVAAVPASYTGKFLAEVVGGG 956 IEHNLDVIKTSDWIIDLGPEGG+GGGTV+A+GTPE+VAA SYTG+FLA ++ G Sbjct 898 IEHNLDVIKTSDWIIDLGPEGGSGGGTVIAEGTPEEVAATEGSYTGQFLAPLLQGA 953 >gi|256379487|ref|YP_003103147.1| excinuclease ABC subunit A [Actinosynnema mirum DSM 43827] gi|255923790|gb|ACU39301.1| excinuclease ABC, A subunit [Actinosynnema mirum DSM 43827] Length=954 Score = 1576 bits (4080), Expect = 0.0, Method: Compositional matrix adjust. Identities = 767/955 (81%), Positives = 850/955 (90%), Gaps = 3/955 (0%) Query 1 VADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 VADRL+V+GAREHNLR VDLDLPRD+LIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA Sbjct 3 VADRLVVRGAREHNLRGVDLDLPRDSLIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 62 Query 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 120 YARQFLGQMDKPDVDFIEGLSPAVSIDQKST+RNPRSTVGTITEVYDYLRLLYARAG H Sbjct 63 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTSRNPRSTVGTITEVYDYLRLLYARAGKAH 122 Query 121 CPTCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV 180 CP CGE +++QTPQQIVDQVLAM +G +F VLAP+VR RKGE+ DLF L QGYSRV+V Sbjct 123 CPVCGEAISKQTPQQIVDQVLAMEQGVKFQVLAPIVRGRKGEYVDLFANLQTQGYSRVKV 182 Query 181 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDH 240 DG VH LTD PKLKKQEKH+I V+DRL VK +AK+RLTDSVETAL LADG+V LEFVD Sbjct 183 DGQVHALTDVPKLKKQEKHEIAAVIDRLAVKTSAKQRLTDSVETALRLADGLVELEFVDL 242 Query 241 ELGAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELVV 300 P R +RFSE LACPN H LA++DLEPRSFSFNSPYGACP C+GLG+R EVDPELVV Sbjct 243 PENDPARVRRFSENLACPNSHPLAIEDLEPRSFSFNSPYGACPTCTGLGVRMEVDPELVV 302 Query 301 PDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGADE 360 PD + L +GA+APW+ G TA+YFTR++ L A+GF +DTPWR+LPAK +KA+L G DE Sbjct 303 PDDELPLGEGAIAPWAGGQTADYFTRLLESLSLAIGFRMDTPWRQLPAKVQKAVLHGVDE 362 Query 361 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRL 420 QV+VRYRNRYGR RSYYADFEGV+ FL+R++ QTESE MKE+YEG+MR+VPCP C GTRL Sbjct 363 QVNVRYRNRYGRERSYYADFEGVIPFLERRLEQTESESMKEKYEGYMREVPCPSCKGTRL 422 Query 421 KPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSR 480 KPEILAVTL G G KSIAEVC +S+ +C+DFL+ L LG RE IAG VLKEI++R Sbjct 423 KPEILAVTL---DHGALGPKSIAEVCAMSVGECSDFLDGLKLGQRESMIAGAVLKEIQAR 479 Query 481 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 540 L FLLDVGL YLSL RA+ TLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDN R Sbjct 480 LRFLLDVGLNYLSLGRASGTLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNHR 539 Query 541 LIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDS 600 LIETLTRLRDLGNTLIVVEHDEDT+ +DW+VDIGPGAGEHGG +VHSGPY LLRNK+S Sbjct 540 LIETLTRLRDLGNTLIVVEHDEDTVRASDWVVDIGPGAGEHGGHVVHSGPYKALLRNKES 599 Query 601 ITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK 660 +TGAYLSGR+ I +P +RR +D +RQLTVVGAREHNLRGIDVSFPLG L SVTGVSGSGK Sbjct 600 VTGAYLSGRKQIPMPELRRPIDKKRQLTVVGAREHNLRGIDVSFPLGCLVSVTGVSGSGK 659 Query 661 STLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGV 720 STLVNDILA VLAN+LNGARQVPGRHTRV GL+++DKLV+VDQSPIGRTPRSNPATYTGV Sbjct 660 STLVNDILATVLANKLNGARQVPGRHTRVKGLEHVDKLVQVDQSPIGRTPRSNPATYTGV 719 Query 721 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ 780 FD IR LFAATTEAKVRGYQPGRFSFNVKGGRCEAC GDGT+KIEMNFLPDVYVPCEVC+ Sbjct 720 FDHIRKLFAATTEAKVRGYQPGRFSFNVKGGRCEACAGDGTLKIEMNFLPDVYVPCEVCK 779 Query 781 GARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPA 840 GARYNRETLEVHYKGKT+SEVLDM IEEAA+FFEPI +HR+LRTLVDVGLGYVRLGQPA Sbjct 780 GARYNRETLEVHYKGKTISEVLDMPIEEAADFFEPINAIHRHLRTLVDVGLGYVRLGQPA 839 Query 841 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIV 900 TLSGGEAQRVKL +ELQKRSTG+TVY+LDEPTTGLHF+DIRKLL VINGLVDKGNTVIV Sbjct 840 TTLSGGEAQRVKLGAELQKRSTGKTVYVLDEPTTGLHFEDIRKLLLVINGLVDKGNTVIV 899 Query 901 IEHNLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPEDVAAVPASYTGKFLAEVVGG 955 IEHNLDVIKTSDW++D+GPEGG+GGG VVA+GTPE VA VP S+TGKFL EV+ G Sbjct 900 IEHNLDVIKTSDWLVDMGPEGGSGGGIVVAEGTPEQVADVPESHTGKFLTEVLKG 954 >gi|331697627|ref|YP_004333866.1| UvrABC system protein A [Pseudonocardia dioxanivorans CB1190] gi|326952316|gb|AEA26013.1| UvrABC system protein A [Pseudonocardia dioxanivorans CB1190] Length=970 Score = 1568 bits (4061), Expect = 0.0, Method: Compositional matrix adjust. Identities = 765/953 (81%), Positives = 851/953 (90%), Gaps = 3/953 (0%) Query 1 VADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 +ADRL+V+GAREHNLR VDLD+PRD+L+VFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA Sbjct 1 MADRLVVRGAREHNLRGVDLDIPRDSLVVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA 60 Query 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH 120 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAG PH Sbjct 61 YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGVPH 120 Query 121 CPTCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV 180 CP CG + +QTPQQIVDQVLAM EGTRF VLAPVVRTRKGEF DLF L AQGYSRV V Sbjct 121 CPVCGHVIEKQTPQQIVDQVLAMTEGTRFQVLAPVVRTRKGEFVDLFTTLQAQGYSRVLV 180 Query 181 DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDH 240 DG VHPL+DPPKLKKQEKHDI VVVDRL V+ ++K+RLTDSVETAL LADG+VVLEFVD Sbjct 181 DGTVHPLSDPPKLKKQEKHDIAVVVDRLVVRPSSKQRLTDSVETALRLADGLVVLEFVDL 240 Query 241 ELGAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELVV 300 E G P RE+RFSE++ACPNGH L +D+LEPR+FSFNSPYGACP CSG+G RKEVDPELVV Sbjct 241 EAGDPQRERRFSERMACPNGHPLGLDELEPRTFSFNSPYGACPTCSGIGTRKEVDPELVV 300 Query 301 PDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGADE 360 PDP+++LA GA+APW+ GHT+EYF R++ GL +GF +DTPWRKL ARKA+L G D+ Sbjct 301 PDPEKSLADGAIAPWAGGHTSEYFGRLLGGLAGTIGFRMDTPWRKLDDAARKAVLHGTDD 360 Query 361 QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRL 420 QVHVRYRNRYGR RSYYA+FEGV+ FL+R++ QTESE +ERYEG+MRDVPCP C G RL Sbjct 361 QVHVRYRNRYGRERSYYANFEGVIPFLERRLDQTESESQRERYEGYMRDVPCPACKGARL 420 Query 421 KPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSR 480 KPE+LAVTL +G+ +SIAEV +S+A+C+ FL+ + L R+ IAG+VLKE+++R Sbjct 421 KPEVLAVTLEHRDQGD---RSIAEVSAMSVAECSAFLDGMVLDARQAMIAGRVLKEVQAR 477 Query 481 LGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 540 LGFLLDVGL+YLSL RAA TLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR Sbjct 478 LGFLLDVGLDYLSLDRAAGTLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRR 537 Query 541 LIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDS 600 LI+TLTRLRDLGNTLIVVEHDEDTI ADW VDIGPGAGEHGG IVHSG L + S Sbjct 538 LIDTLTRLRDLGNTLIVVEHDEDTIRAADWAVDIGPGAGEHGGHIVHSGSVAGLESHDTS 597 Query 601 ITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGK 660 +TGAYLSGR SI +PA RR +D +R LTVVGAREHNLRGIDV PLG L +VTGVSGSGK Sbjct 598 LTGAYLSGRRSIPVPARRRPLDRKRTLTVVGAREHNLRGIDVEIPLGGLVAVTGVSGSGK 657 Query 661 STLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGV 720 STLVNDILA VLANRLNGARQVPGRHTR+ G++ LDKLVRVDQSPIGRTPRSNPATYTGV Sbjct 658 STLVNDILATVLANRLNGARQVPGRHTRINGVEELDKLVRVDQSPIGRTPRSNPATYTGV 717 Query 721 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ 780 +DKIRTLFA+TTEAKVRGYQ GRFSFNVKGGRCEAC+GDGTIKIEMNFLPDVYVPCEVC Sbjct 718 WDKIRTLFASTTEAKVRGYQAGRFSFNVKGGRCEACSGDGTIKIEMNFLPDVYVPCEVCH 777 Query 781 GARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPA 840 GARYNRETLEVHYKGKTV++VLDM IEEAAEFFEPI+ + RYL+TLVDVGLGYVRLGQPA Sbjct 778 GARYNRETLEVHYKGKTVADVLDMPIEEAAEFFEPISSISRYLKTLVDVGLGYVRLGQPA 837 Query 841 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIV 900 PTLSGGEAQRVKLASELQKRS GRT+YILDEPTTGLHF+DIRKLL VINGLVDKGN+V+V Sbjct 838 PTLSGGEAQRVKLASELQKRSNGRTIYILDEPTTGLHFEDIRKLLLVINGLVDKGNSVVV 897 Query 901 IEHNLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPEDVAAVPASYTGKFLAEVV 953 IEHNLDVIKT+DW++D+GPEGG+GGGTVVA+GTPE VAAV SYTG+FL +V Sbjct 898 IEHNLDVIKTADWVVDMGPEGGSGGGTVVAEGTPEQVAAVEGSYTGQFLRGLV 950 Lambda K H 0.318 0.137 0.398 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 2412924847536 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40