BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1638A Length=85 Score E Sequences producing significant alignments: (Bits) Value gi|15841094|ref|NP_336131.1| hypothetical protein MT1676 [Mycoba... 170 6e-41 gi|183982459|ref|YP_001850750.1| hypothetical protein MMAR_2445 ... 115 2e-24 gi|240168022|ref|ZP_04746681.1| hypothetical protein MkanA1_0181... 110 6e-23 gi|118617263|ref|YP_905595.1| hypothetical protein MUL_1624 [Myc... 103 1e-20 gi|342860783|ref|ZP_08717433.1| hypothetical protein MCOL_17968 ... 99.4 1e-19 gi|120404306|ref|YP_954135.1| hypothetical protein Mvan_3332 [My... 99.0 2e-19 gi|118473052|ref|YP_888097.1| hypothetical protein MSMEG_3804 [M... 98.6 3e-19 gi|333990458|ref|YP_004523072.1| hypothetical protein JDM601_181... 93.6 9e-18 gi|296164536|ref|ZP_06847107.1| conserved hypothetical protein [... 93.6 1e-17 gi|126435579|ref|YP_001071270.1| hypothetical protein Mjls_3000 ... 91.7 4e-17 gi|169629403|ref|YP_001703052.1| hypothetical protein MAB_2317c ... 87.0 8e-16 gi|108799951|ref|YP_640148.1| hypothetical protein Mmcs_2985 [My... 85.5 2e-15 gi|145224130|ref|YP_001134808.1| hypothetical protein Mflv_3546 ... 84.0 7e-15 gi|254775586|ref|ZP_05217102.1| hypothetical protein MaviaA2_130... 78.6 3e-13 gi|41407440|ref|NP_960276.1| hypothetical protein MAP1342c [Myco... 77.8 5e-13 gi|118465294|ref|YP_882318.1| hypothetical protein MAV_3134 [Myc... 77.0 1e-12 gi|254820327|ref|ZP_05225328.1| hypothetical protein MintA_10381... 76.3 1e-12 gi|226306772|ref|YP_002766732.1| hypothetical protein RER_32850 ... 74.7 5e-12 gi|229492665|ref|ZP_04386466.1| conserved hypothetical protein [... 74.3 5e-12 gi|312139876|ref|YP_004007212.1| hypothetical protein REQ_24910 ... 67.4 7e-10 gi|325674246|ref|ZP_08153935.1| hypothetical protein HMPREF0724_... 67.4 8e-10 gi|262202748|ref|YP_003273956.1| hypothetical protein Gbro_2850 ... 66.2 1e-09 gi|111017971|ref|YP_700943.1| hypothetical protein RHA1_ro00957 ... 65.9 2e-09 gi|226360102|ref|YP_002777880.1| hypothetical protein ROP_06880 ... 65.9 2e-09 gi|54023894|ref|YP_118136.1| hypothetical protein nfa19260 [Noca... 64.7 5e-09 gi|343928317|ref|ZP_08767769.1| hypothetical protein GOALK_113_0... 63.2 1e-08 gi|300788125|ref|YP_003768416.1| phage shock protein A [Amycolat... 62.4 2e-08 gi|258655374|ref|YP_003204530.1| hypothetical protein Namu_5275 ... 62.0 3e-08 gi|326382695|ref|ZP_08204386.1| hypothetical protein SCNU_07145 ... 61.6 4e-08 gi|331698354|ref|YP_004334593.1| hypothetical protein Psed_4588 ... 61.2 6e-08 gi|325672754|ref|ZP_08152450.1| hypothetical protein HMPREF0724_... 60.8 6e-08 gi|312139365|ref|YP_004006701.1| phage shock protein [Rhodococcu... 60.5 8e-08 gi|333919176|ref|YP_004492757.1| hypothetical protein AS9A_1505 ... 59.3 2e-07 gi|54025825|ref|YP_120067.1| hypothetical protein nfa38550 [Noca... 59.3 2e-07 gi|300787775|ref|YP_003768066.1| hypothetical protein AMED_5921 ... 58.9 2e-07 gi|296139818|ref|YP_003647061.1| hypothetical protein Tpau_2111 ... 58.5 4e-07 gi|183981985|ref|YP_001850276.1| 35 kDa alanine rich protein [My... 58.2 4e-07 gi|134102325|ref|YP_001107986.1| phage shock protein A, PspA [Sa... 58.2 4e-07 gi|331698383|ref|YP_004334622.1| phage shock protein A, PspA [Ps... 58.2 4e-07 gi|240171181|ref|ZP_04749840.1| 35 kDa alanine rich protein [Myc... 57.8 6e-07 gi|296139492|ref|YP_003646735.1| phage shock protein PspA [Tsuka... 57.8 6e-07 gi|302528494|ref|ZP_07280836.1| phage shock protein A [Streptomy... 57.4 8e-07 gi|257056502|ref|YP_003134334.1| phage shock protein A (IM30), s... 57.0 1e-06 gi|333919364|ref|YP_004492945.1| Phage shock protein A, PspA [Am... 56.6 1e-06 gi|340795941|ref|YP_004761404.1| rod-shaped morphology protein [... 56.2 2e-06 gi|226306229|ref|YP_002766189.1| hypothetical protein RER_27420 ... 55.5 2e-06 gi|68536198|ref|YP_250903.1| hypothetical protein jk1121 [Coryne... 55.5 3e-06 gi|319948415|ref|ZP_08022554.1| phage shock protein A, PspA [Die... 55.5 3e-06 gi|342858390|ref|ZP_08715045.1| 35kd antigen [Mycobacterium colo... 55.1 3e-06 gi|254821250|ref|ZP_05226251.1| 35kd antigen [Mycobacterium intr... 55.1 3e-06 >gi|15841094|ref|NP_336131.1| hypothetical protein MT1676 [Mycobacterium tuberculosis CDC1551] gi|31792825|ref|NP_855318.1| hypothetical protein Mb1665c [Mycobacterium bovis AF2122/97] gi|57116895|ref|YP_177650.1| hypothetical protein Rv1638A [Mycobacterium tuberculosis H37Rv] 78 more sequence titles Length=85 Score = 170 bits (431), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 85/85 (100%), Positives = 85/85 (100%), Gaps = 0/85 (0%) Query 1 MPDEPTPPEATTPNSESDPRYDSAGVPTFESVREKIETRYGTALGATELDAESPQGRRLE 60 MPDEPTPPEATTPNSESDPRYDSAGVPTFESVREKIETRYGTALGATELDAESPQGRRLE Sbjct 1 MPDEPTPPEATTPNSESDPRYDSAGVPTFESVREKIETRYGTALGATELDAESPQGRRLE 60 Query 61 DQYAQRQRAAAERLAQIRESMHTDE 85 DQYAQRQRAAAERLAQIRESMHTDE Sbjct 61 DQYAQRQRAAAERLAQIRESMHTDE 85 >gi|183982459|ref|YP_001850750.1| hypothetical protein MMAR_2445 [Mycobacterium marinum M] gi|183175785|gb|ACC40895.1| conserved hypothetical protein [Mycobacterium marinum M] Length=84 Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 61/85 (72%), Positives = 69/85 (82%), Gaps = 1/85 (1%) Query 1 MPDEPTPPEATTPNSESDPRYDSAGVPTFESVREKIETRYGTALGATELDAESPQGRRLE 60 MPD+P PP A TP++ DP YD AG PTFESVREKIE+RY TALGA ELDAE+ +GR +E Sbjct 1 MPDQPEPP-AETPSAPPDPGYDDAGTPTFESVREKIESRYATALGAAELDAETSEGRTVE 59 Query 61 DQYAQRQRAAAERLAQIRESMHTDE 85 +QY QRQRAAAERLAQIRESM E Sbjct 60 EQYEQRQRAAAERLAQIRESMREHE 84 >gi|240168022|ref|ZP_04746681.1| hypothetical protein MkanA1_01810 [Mycobacterium kansasii ATCC 12478] Length=91 Score = 110 bits (276), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 56/85 (66%), Positives = 69/85 (82%), Gaps = 1/85 (1%) Query 1 MPDEPTPPEATTPNSESDPRYDSAGVPTFESVREKIETRYGTALGATELDAESPQGRRLE 60 MPDEP +A + + DP YD+ GVPTFE+VREKIE+RY TA+GA ELDAE+ + R +E Sbjct 8 MPDEPAA-QADSSDPGHDPGYDNGGVPTFEAVREKIESRYATAMGAAELDAETTESRSVE 66 Query 61 DQYAQRQRAAAERLAQIRESMHTDE 85 +QY +RQRAAAERLA+IRESMHTDE Sbjct 67 EQYEKRQRAAAERLARIRESMHTDE 91 >gi|118617263|ref|YP_905595.1| hypothetical protein MUL_1624 [Mycobacterium ulcerans Agy99] gi|118569373|gb|ABL04124.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99] Length=100 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 52/68 (77%), Positives = 57/68 (84%), Gaps = 0/68 (0%) Query 18 DPRYDSAGVPTFESVREKIETRYGTALGATELDAESPQGRRLEDQYAQRQRAAAERLAQI 77 DP YD AG PTFESVREKIE+RY TALGA ELDAE+ +GR +E+QY QRQRAAAERLAQI Sbjct 33 DPGYDDAGTPTFESVREKIESRYATALGAAELDAETSEGRTVEEQYEQRQRAAAERLAQI 92 Query 78 RESMHTDE 85 RESM E Sbjct 93 RESMREHE 100 >gi|342860783|ref|ZP_08717433.1| hypothetical protein MCOL_17968 [Mycobacterium colombiense CECT 3035] gi|342131807|gb|EGT85064.1| hypothetical protein MCOL_17968 [Mycobacterium colombiense CECT 3035] Length=80 Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 52/82 (64%), Positives = 60/82 (74%), Gaps = 6/82 (7%) Query 1 MPDEPTPPEATTPNSESDPRYDSAGVPTFESVREKIETRYGTALGATELDAESPQGRRLE 60 MPDEP P P YD GVPTFESVR++IE+RY TA GA ELDAESP+GR + Sbjct 1 MPDEPVTPTGPVPA------YDDGGVPTFESVRDQIESRYATAQGAAELDAESPEGRSVA 54 Query 61 DQYAQRQRAAAERLAQIRESMH 82 +QY +RQRAAAERLA+IRESM Sbjct 55 EQYDERQRAAAERLAEIRESMR 76 >gi|120404306|ref|YP_954135.1| hypothetical protein Mvan_3332 [Mycobacterium vanbaalenii PYR-1] gi|119957124|gb|ABM14129.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=81 Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 49/69 (72%), Positives = 59/69 (86%), Gaps = 0/69 (0%) Query 13 PNSESDPRYDSAGVPTFESVREKIETRYGTALGATELDAESPQGRRLEDQYAQRQRAAAE 72 P++E +P Y S GVPTFESVREKIETRY T+LG+ EL +E+P+GR +E+QY RQRAAAE Sbjct 5 PSTEPEPGYSSDGVPTFESVREKIETRYATSLGSAELASETPEGRTVEEQYDARQRAAAE 64 Query 73 RLAQIRESM 81 RLAQIRESM Sbjct 65 RLAQIRESM 73 >gi|118473052|ref|YP_888097.1| hypothetical protein MSMEG_3804 [Mycobacterium smegmatis str. MC2 155] gi|118174339|gb|ABK75235.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=84 Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 51/85 (60%), Positives = 63/85 (75%), Gaps = 3/85 (3%) Query 1 MPDEPTPPEATTPNSESDPRYDSAGVPTFESVREKIETRYGTALGATELDAESPQGRRLE 60 M D+P P A P Y GVPTF++VREKIETRYGTA+G++EL E+P+GRR+E Sbjct 1 MTDQPDPGPAPQPEETG---YTEGGVPTFDAVREKIETRYGTAIGSSELAGETPEGRRVE 57 Query 61 DQYAQRQRAAAERLAQIRESMHTDE 85 +QY +RQRAAAERL QIR+SM DE Sbjct 58 EQYEERQRAAAERLEQIRKSMREDE 82 >gi|333990458|ref|YP_004523072.1| hypothetical protein JDM601_1818 [Mycobacterium sp. JDM601] gi|333486426|gb|AEF35818.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=79 Score = 93.6 bits (231), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 50/85 (59%), Positives = 59/85 (70%), Gaps = 7/85 (8%) Query 1 MPDEPTPPEATTPNSESDPRYDSAGVPTFESVREKIETRYGTALGATELDAESPQGRRLE 60 M D+P P+ T YD GVPTFESVREKIE R+ T++GA ELDAE+P+GR +E Sbjct 1 MGDDPGDPQPDTG-------YDDTGVPTFESVREKIENRFETSIGAQELDAETPEGRTVE 53 Query 61 DQYAQRQRAAAERLAQIRESMHTDE 85 QY RQRAAA+RL QIR SM DE Sbjct 54 KQYQDRQRAAADRLEQIRASMRDDE 78 >gi|296164536|ref|ZP_06847107.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295900136|gb|EFG79571.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=79 Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 58/84 (70%), Positives = 64/84 (77%), Gaps = 9/84 (10%) Query 1 MPDEPTPPEATTPNSESDPRYDSAGVPTFESVREKIETRYGTALGATELDAESPQGRRLE 60 MP+EPTPP DP YDS GVPTF+SVREKIE RY TA GA ELDAES QGR +E Sbjct 1 MPEEPTPP---------DPGYDSTGVPTFDSVREKIEGRYATAQGAAELDAESAQGRSVE 51 Query 61 DQYAQRQRAAAERLAQIRESMHTD 84 +QY +R+RAAAERLAQIRESM D Sbjct 52 EQYEERERAAAERLAQIRESMRRD 75 >gi|126435579|ref|YP_001071270.1| hypothetical protein Mjls_3000 [Mycobacterium sp. JLS] gi|126235379|gb|ABN98779.1| hypothetical protein Mjls_3000 [Mycobacterium sp. JLS] Length=91 Score = 91.7 bits (226), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 45/65 (70%), Positives = 52/65 (80%), Gaps = 0/65 (0%) Query 18 DPRYDSAGVPTFESVREKIETRYGTALGATELDAESPQGRRLEDQYAQRQRAAAERLAQI 77 D Y GVPTFESVREKIE RYG+A+GA EL AE+P+GR ++QY +RQRAAAERLAQI Sbjct 24 DTGYTPGGVPTFESVREKIEGRYGSAIGAAELAAETPEGRTADEQYEERQRAAAERLAQI 83 Query 78 RESMH 82 R MH Sbjct 84 RAQMH 88 >gi|169629403|ref|YP_001703052.1| hypothetical protein MAB_2317c [Mycobacterium abscessus ATCC 19977] gi|169241370|emb|CAM62398.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=72 Score = 87.0 bits (214), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 43/67 (65%), Positives = 52/67 (78%), Gaps = 0/67 (0%) Query 18 DPRYDSAGVPTFESVREKIETRYGTALGATELDAESPQGRRLEDQYAQRQRAAAERLAQI 77 DP Y +GVPTFESVREKIE+R TA G+ ELDAES +GR +E Q+ + RAAA+RLA+I Sbjct 6 DPGYTDSGVPTFESVREKIESRSSTAAGSAELDAESAEGRAVEAQFEAKNRAAAQRLAEI 65 Query 78 RESMHTD 84 RESM D Sbjct 66 RESMRED 72 >gi|108799951|ref|YP_640148.1| hypothetical protein Mmcs_2985 [Mycobacterium sp. MCS] gi|119869061|ref|YP_939013.1| hypothetical protein Mkms_3029 [Mycobacterium sp. KMS] gi|108770370|gb|ABG09092.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119695150|gb|ABL92223.1| conserved hypothetical protein [Mycobacterium sp. KMS] Length=60 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 41/57 (72%), Positives = 49/57 (86%), Gaps = 0/57 (0%) Query 26 VPTFESVREKIETRYGTALGATELDAESPQGRRLEDQYAQRQRAAAERLAQIRESMH 82 +PTFESVREKIE RYG+A+GA EL AE+P+GR ++QY +RQRAAAERLAQIR MH Sbjct 1 MPTFESVREKIEGRYGSAIGAAELAAETPEGRTADEQYEERQRAAAERLAQIRAQMH 57 >gi|145224130|ref|YP_001134808.1| hypothetical protein Mflv_3546 [Mycobacterium gilvum PYR-GCK] gi|315444466|ref|YP_004077345.1| hypothetical protein Mspyr1_28880 [Mycobacterium sp. Spyr1] gi|145216616|gb|ABP46020.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK] gi|315262769|gb|ADT99510.1| hypothetical protein Mspyr1_28880 [Mycobacterium sp. Spyr1] Length=98 Score = 84.0 bits (206), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 47/90 (53%), Positives = 60/90 (67%), Gaps = 9/90 (10%) Query 1 MPDEPTP---------PEATTPNSESDPRYDSAGVPTFESVREKIETRYGTALGATELDA 51 MPD+P+ P + P + + Y + GVPTFESVREKIE RY T++G+ EL + Sbjct 1 MPDQPSDEPEIVGEILPAESAPPAPVETGYTADGVPTFESVREKIENRYTTSIGSAELAS 60 Query 52 ESPQGRRLEDQYAQRQRAAAERLAQIRESM 81 E+ +GR +E QY RQRAAAERLAQIR SM Sbjct 61 ETTEGRTIEAQYDARQRAAAERLAQIRASM 90 >gi|254775586|ref|ZP_05217102.1| hypothetical protein MaviaA2_13088 [Mycobacterium avium subsp. avium ATCC 25291] Length=78 Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 50/81 (62%), Positives = 60/81 (75%), Gaps = 8/81 (9%) Query 1 MPDEPTPPEATTPNSESDPRYDSAGVPTFESVREKIETRYGTALGATELDAESPQGRRLE 60 MPDE P +D YD+AGVPTF+SVR+KIE RY TA GA +LDAESP+GR + Sbjct 1 MPDESATP--------ADAGYDNAGVPTFDSVRDKIEARYATAQGAADLDAESPEGRSVA 52 Query 61 DQYAQRQRAAAERLAQIRESM 81 +QY +R+RAAA RLAQIRESM Sbjct 53 EQYDERKRAAARRLAQIRESM 73 >gi|41407440|ref|NP_960276.1| hypothetical protein MAP1342c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395792|gb|AAS03659.1| hypothetical protein MAP_1342c [Mycobacterium avium subsp. paratuberculosis K-10] gi|336457793|gb|EGO36787.1| hypothetical protein MAPs_18920 [Mycobacterium avium subsp. paratuberculosis S397] Length=78 Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 50/81 (62%), Positives = 60/81 (75%), Gaps = 8/81 (9%) Query 1 MPDEPTPPEATTPNSESDPRYDSAGVPTFESVREKIETRYGTALGATELDAESPQGRRLE 60 MPDE P +D YD+AGVPTF+SVR+KIE RY TA GA +LDAESP+GR + Sbjct 1 MPDESATP--------ADAGYDNAGVPTFDSVRDKIEARYATAQGAADLDAESPEGRSVA 52 Query 61 DQYAQRQRAAAERLAQIRESM 81 +QY +R+RAAA RLAQIRESM Sbjct 53 EQYDERERAAARRLAQIRESM 73 >gi|118465294|ref|YP_882318.1| hypothetical protein MAV_3134 [Mycobacterium avium 104] gi|118166581|gb|ABK67478.1| conserved hypothetical protein [Mycobacterium avium 104] Length=78 Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 49/81 (61%), Positives = 60/81 (75%), Gaps = 8/81 (9%) Query 1 MPDEPTPPEATTPNSESDPRYDSAGVPTFESVREKIETRYGTALGATELDAESPQGRRLE 60 MPDE P +D YD+AGVPTF+SVR+KIE RY TA GA +L+AESP+GR + Sbjct 1 MPDESATP--------ADAGYDNAGVPTFDSVRDKIEARYATAQGAADLNAESPEGRSVA 52 Query 61 DQYAQRQRAAAERLAQIRESM 81 +QY +R+RAAA RLAQIRESM Sbjct 53 EQYDERKRAAARRLAQIRESM 73 >gi|254820327|ref|ZP_05225328.1| hypothetical protein MintA_10381 [Mycobacterium intracellulare ATCC 13950] Length=81 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 48/78 (62%), Positives = 60/78 (77%), Gaps = 0/78 (0%) Query 8 PEATTPNSESDPRYDSAGVPTFESVREKIETRYGTALGATELDAESPQGRRLEDQYAQRQ 67 P+ ++ +D YD AG PTFESVR+KIE RY TA G+ ELDAESP+GR +E +Y +R+ Sbjct 2 PDESSTEGAADAGYDDAGTPTFESVRDKIEARYATAQGSAELDAESPEGRSVEAEYDERR 61 Query 68 RAAAERLAQIRESMHTDE 85 RAAAERLAQIRESM D+ Sbjct 62 RAAAERLAQIRESMRRDD 79 >gi|226306772|ref|YP_002766732.1| hypothetical protein RER_32850 [Rhodococcus erythropolis PR4] gi|226185889|dbj|BAH33993.1| hypothetical protein RER_32850 [Rhodococcus erythropolis PR4] Length=175 Score = 74.7 bits (182), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 33/63 (53%), Positives = 47/63 (75%), Gaps = 0/63 (0%) Query 19 PRYDSAGVPTFESVREKIETRYGTALGATELDAESPQGRRLEDQYAQRQRAAAERLAQIR 78 P Y GVPTF+ VREKIE R+GT++G+ EL ESP G+ +++Q+ +RQ+AA +L +IR Sbjct 111 PDYTEGGVPTFDRVREKIEGRFGTSIGSAELAHESPAGKSVDEQWDERQKAAKAKLEEIR 170 Query 79 ESM 81 SM Sbjct 171 RSM 173 >gi|229492665|ref|ZP_04386466.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] gi|229320324|gb|EEN86144.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] Length=186 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 33/64 (52%), Positives = 48/64 (75%), Gaps = 0/64 (0%) Query 18 DPRYDSAGVPTFESVREKIETRYGTALGATELDAESPQGRRLEDQYAQRQRAAAERLAQI 77 +P Y GVPTF+ VREKIE R+GT++G+ EL ESP G+ +++Q+ +RQ+AA +L +I Sbjct 121 EPDYTEGGVPTFDRVREKIEGRFGTSIGSAELAHESPAGKSVDEQWDERQKAAKAKLEEI 180 Query 78 RESM 81 R SM Sbjct 181 RRSM 184 >gi|312139876|ref|YP_004007212.1| hypothetical protein REQ_24910 [Rhodococcus equi 103S] gi|311889215|emb|CBH48529.1| hypothetical protein REQ_24910 [Rhodococcus equi 103S] Length=145 Score = 67.4 bits (163), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 31/61 (51%), Positives = 46/61 (76%), Gaps = 0/61 (0%) Query 21 YDSAGVPTFESVREKIETRYGTALGATELDAESPQGRRLEDQYAQRQRAAAERLAQIRES 80 Y AGVPTF+ VR++IE R+GTA+G+ EL+ ES GR +++Q+ R++A +RL +IR S Sbjct 82 YTDAGVPTFDRVRDRIEERFGTAIGSEELERESRTGRDVDEQWQAREKAGRDRLDEIRRS 141 Query 81 M 81 M Sbjct 142 M 142 >gi|325674246|ref|ZP_08153935.1| hypothetical protein HMPREF0724_11717 [Rhodococcus equi ATCC 33707] gi|325554926|gb|EGD24599.1| hypothetical protein HMPREF0724_11717 [Rhodococcus equi ATCC 33707] Length=145 Score = 67.4 bits (163), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 31/61 (51%), Positives = 46/61 (76%), Gaps = 0/61 (0%) Query 21 YDSAGVPTFESVREKIETRYGTALGATELDAESPQGRRLEDQYAQRQRAAAERLAQIRES 80 Y AGVPTF+ VR++IE R+GTA+G+ EL+ ES GR +++Q+ R++A +RL +IR S Sbjct 82 YTDAGVPTFDRVRDRIEERFGTAIGSEELERESRTGRDVDEQWRAREKAGRDRLDEIRRS 141 Query 81 M 81 M Sbjct 142 M 142 >gi|262202748|ref|YP_003273956.1| hypothetical protein Gbro_2850 [Gordonia bronchialis DSM 43247] gi|262086095|gb|ACY22063.1| hypothetical protein Gbro_2850 [Gordonia bronchialis DSM 43247] Length=115 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 32/66 (49%), Positives = 47/66 (72%), Gaps = 0/66 (0%) Query 18 DPRYDSAGVPTFESVREKIETRYGTALGATELDAESPQGRRLEDQYAQRQRAAAERLAQI 77 DP Y AGVPTF+ VR+KIE R TA+G+ EL ES +G+++++ +R AA +RL +I Sbjct 50 DPNYTDAGVPTFDFVRDKIENRISTAIGSQELAEESHEGQQVDEMMRKRDEAAKKRLEEI 109 Query 78 RESMHT 83 R+SM + Sbjct 110 RKSMGS 115 >gi|111017971|ref|YP_700943.1| hypothetical protein RHA1_ro00957 [Rhodococcus jostii RHA1] gi|110817501|gb|ABG92785.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=132 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 29/64 (46%), Positives = 47/64 (74%), Gaps = 0/64 (0%) Query 18 DPRYDSAGVPTFESVREKIETRYGTALGATELDAESPQGRRLEDQYAQRQRAAAERLAQI 77 +P Y GVPTF+ VRE+IE R+GTA+G++EL +SP G+ L++ + +R++A +L +I Sbjct 66 EPDYTPGGVPTFDRVRERIEGRFGTAVGSSELAHDSPSGQSLDEAWEKREKAGKAKLDEI 125 Query 78 RESM 81 R S+ Sbjct 126 RRSL 129 >gi|226360102|ref|YP_002777880.1| hypothetical protein ROP_06880 [Rhodococcus opacus B4] gi|226238587|dbj|BAH48935.1| hypothetical protein [Rhodococcus opacus B4] Length=132 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 30/63 (48%), Positives = 45/63 (72%), Gaps = 0/63 (0%) Query 19 PRYDSAGVPTFESVREKIETRYGTALGATELDAESPQGRRLEDQYAQRQRAAAERLAQIR 78 P Y GVPTF+ VRE+IE R+GTA G++EL +SP G+ LE+ + +R++A +L +IR Sbjct 67 PDYTPGGVPTFDRVRERIEGRFGTATGSSELAHDSPSGQSLEEAWEKREKAGKAKLDEIR 126 Query 79 ESM 81 S+ Sbjct 127 RSL 129 >gi|54023894|ref|YP_118136.1| hypothetical protein nfa19260 [Nocardia farcinica IFM 10152] gi|54015402|dbj|BAD56772.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=159 Score = 64.7 bits (156), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 35/62 (57%), Positives = 50/62 (81%), Gaps = 0/62 (0%) Query 21 YDSAGVPTFESVREKIETRYGTALGATELDAESPQGRRLEDQYAQRQRAAAERLAQIRES 80 Y S+G+PTF+SVR+K+E R+GTA G +ELD E+P GR +++Q+A R+ AA ERL +IR S Sbjct 93 YTSSGMPTFDSVRDKVEQRFGTAQGRSELDRETPVGRSVDEQFAAREEAARERLDRIRRS 152 Query 81 MH 82 +H Sbjct 153 LH 154 >gi|343928317|ref|ZP_08767769.1| hypothetical protein GOALK_113_00220 [Gordonia alkanivorans NBRC 16433] gi|343761787|dbj|GAA14695.1| hypothetical protein GOALK_113_00220 [Gordonia alkanivorans NBRC 16433] Length=100 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 30/70 (43%), Positives = 46/70 (66%), Gaps = 0/70 (0%) Query 12 TPNSESDPRYDSAGVPTFESVREKIETRYGTALGATELDAESPQGRRLEDQYAQRQRAAA 71 P + DP Y +GVPTF+ VR+KIE R TA+G+ +L S +G+ +++ +R AA Sbjct 29 VPGTLPDPDYTDSGVPTFDFVRDKIENRINTAIGSQDLAEASAEGQSVDEMMRKRDEAAK 88 Query 72 ERLAQIRESM 81 +RL +IR+SM Sbjct 89 KRLEEIRKSM 98 >gi|300788125|ref|YP_003768416.1| phage shock protein A [Amycolatopsis mediterranei U32] gi|299797639|gb|ADJ48014.1| phage shock protein A [Amycolatopsis mediterranei U32] gi|340529710|gb|AEK44915.1| phage shock protein A [Amycolatopsis mediterranei S699] Length=279 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 32/58 (56%), Positives = 37/58 (64%), Gaps = 0/58 (0%) Query 27 PTFESVREKIETRYGTALGATELDAESPQGRRLEDQYAQRQRAAAERLAQIRESMHTD 84 P+ E VR+KIE RY TALG+ EL S QGR +E Q + Q A RL QIR SMH D Sbjct 184 PSLEEVRDKIEKRYTTALGSAELAQNSVQGRMMEVQASTTQMAGQSRLQQIRASMHGD 241 >gi|258655374|ref|YP_003204530.1| hypothetical protein Namu_5275 [Nakamurella multipartita DSM 44233] gi|258558599|gb|ACV81541.1| hypothetical protein Namu_5275 [Nakamurella multipartita DSM 44233] Length=106 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 28/63 (45%), Positives = 44/63 (70%), Gaps = 0/63 (0%) Query 19 PRYDSAGVPTFESVREKIETRYGTALGATELDAESPQGRRLEDQYAQRQRAAAERLAQIR 78 P Y + GVP+ + VR+KIE R+ +LG+ EL E+P+ R +Q A+R++AA ++LA IR Sbjct 37 PDYSAGGVPSLDFVRDKIEGRFARSLGSAELAGETPEARSAAEQQAEREKAAQDKLAAIR 96 Query 79 ESM 81 S+ Sbjct 97 NSL 99 >gi|326382695|ref|ZP_08204386.1| hypothetical protein SCNU_07145 [Gordonia neofelifaecis NRRL B-59395] gi|326198814|gb|EGD55997.1| hypothetical protein SCNU_07145 [Gordonia neofelifaecis NRRL B-59395] Length=98 Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 32/74 (44%), Positives = 46/74 (63%), Gaps = 0/74 (0%) Query 8 PEATTPNSESDPRYDSAGVPTFESVREKIETRYGTALGATELDAESPQGRRLEDQYAQRQ 67 P P+ E Y AGVPTF+ VR+KIE R TA+G+ EL +P+ + L++ A R Sbjct 23 PSVRAPSYEDVTGYTEAGVPTFDHVRDKIEKRTATAIGSEELSEMTPEAQALDEAMADRD 82 Query 68 RAAAERLAQIRESM 81 AA ++L +IR+SM Sbjct 83 AAAKKKLEEIRKSM 96 >gi|331698354|ref|YP_004334593.1| hypothetical protein Psed_4588 [Pseudonocardia dioxanivorans CB1190] gi|326953043|gb|AEA26740.1| hypothetical protein Psed_4588 [Pseudonocardia dioxanivorans CB1190] Length=117 Score = 61.2 bits (147), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 29/61 (48%), Positives = 42/61 (69%), Gaps = 0/61 (0%) Query 21 YDSAGVPTFESVREKIETRYGTALGATELDAESPQGRRLEDQYAQRQRAAAERLAQIRES 80 Y AGVPT + VR+KIE R+ T+LG EL E+ GR + +Q A+R++ A E+L +IR S Sbjct 54 YTDAGVPTLDYVRDKIEGRWATSLGTAELAGETEAGRSIAEQEAEREKKAKEKLDEIRRS 113 Query 81 M 81 + Sbjct 114 L 114 >gi|325672754|ref|ZP_08152450.1| hypothetical protein HMPREF0724_10231 [Rhodococcus equi ATCC 33707] gi|325556631|gb|EGD26297.1| hypothetical protein HMPREF0724_10231 [Rhodococcus equi ATCC 33707] Length=274 Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 32/58 (56%), Positives = 36/58 (63%), Gaps = 0/58 (0%) Query 27 PTFESVREKIETRYGTALGATELDAESPQGRRLEDQYAQRQRAAAERLAQIRESMHTD 84 P+ ++VREKIE RY ALGA EL S QGR +E Q A Q A RL QIR SM D Sbjct 185 PSLDAVREKIEQRYANALGAAELAQNSVQGRMMEVQQASIQMAGHSRLEQIRASMKGD 242 >gi|312139365|ref|YP_004006701.1| phage shock protein [Rhodococcus equi 103S] gi|311888704|emb|CBH48016.1| putative phage shock protein [Rhodococcus equi 103S] Length=295 Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 32/58 (56%), Positives = 36/58 (63%), Gaps = 0/58 (0%) Query 27 PTFESVREKIETRYGTALGATELDAESPQGRRLEDQYAQRQRAAAERLAQIRESMHTD 84 P+ ++VREKIE RY ALGA EL S QGR +E Q A Q A RL QIR SM D Sbjct 206 PSLDAVREKIEQRYANALGAAELAQNSVQGRMMEVQQASIQMAGHSRLEQIRASMKGD 263 >gi|333919176|ref|YP_004492757.1| hypothetical protein AS9A_1505 [Amycolicicoccus subflavus DQS3-9A1] gi|333481397|gb|AEF39957.1| hypothetical protein AS9A_1505 [Amycolicicoccus subflavus DQS3-9A1] Length=181 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 30/65 (47%), Positives = 38/65 (59%), Gaps = 0/65 (0%) Query 18 DPRYDSAGVPTFESVREKIETRYGTALGATELDAESPQGRRLEDQYAQRQRAAAERLAQI 77 +P + GVPTF SVR+KI R+ A+GA+E + R LE Q+ R R A ERL QI Sbjct 116 EPGWTKEGVPTFSSVRDKIAARFAVAIGASETTVSEAEERSLEQQWEARARMARERLNQI 175 Query 78 RESMH 82 R M Sbjct 176 RGLMQ 180 >gi|54025825|ref|YP_120067.1| hypothetical protein nfa38550 [Nocardia farcinica IFM 10152] gi|54017333|dbj|BAD58703.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=275 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 31/55 (57%), Positives = 35/55 (64%), Gaps = 0/55 (0%) Query 27 PTFESVREKIETRYGTALGATELDAESPQGRRLEDQYAQRQRAAAERLAQIRESM 81 P+ ++VREKIE RY ALGA EL S QGR +E Q A Q A RL QIR SM Sbjct 185 PSLDAVREKIERRYANALGAAELAQNSVQGRMMEVQQASVQMAGHSRLEQIRASM 239 >gi|300787775|ref|YP_003768066.1| hypothetical protein AMED_5921 [Amycolatopsis mediterranei U32] gi|299797289|gb|ADJ47664.1| conserved hypothetical protein [Amycolatopsis mediterranei U32] gi|340529344|gb|AEK44549.1| hypothetical protein RAM_30370 [Amycolatopsis mediterranei S699] Length=101 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 30/67 (45%), Positives = 42/67 (63%), Gaps = 2/67 (2%) Query 18 DPRYDSAGVPTFESVREKIETRYGTALGATELDAESPQ--GRRLEDQYAQRQRAAAERLA 75 DP Y GVP+F+ VR+KIE RY T+LG+ ++ + L+ Q A R +AA +RLA Sbjct 33 DPDYSEGGVPSFDFVRDKIENRYTTSLGSVDVAGLGTENTAETLDKQIADRDQAAKDRLA 92 Query 76 QIRESMH 82 +IR SM Sbjct 93 EIRRSMR 99 >gi|296139818|ref|YP_003647061.1| hypothetical protein Tpau_2111 [Tsukamurella paurometabola DSM 20162] gi|296027952|gb|ADG78722.1| hypothetical protein Tpau_2111 [Tsukamurella paurometabola DSM 20162] Length=113 Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 32/70 (46%), Positives = 41/70 (59%), Gaps = 0/70 (0%) Query 12 TPNSESDPRYDSAGVPTFESVREKIETRYGTALGATELDAESPQGRRLEDQYAQRQRAAA 71 TP Y AGVPTF+ VRE IE R TALG EL S G E +A+R++AA Sbjct 36 TPTGADVSGYTDAGVPTFDHVRESIERRTATALGFQELSHGSAAGDNAERAFAEREKAAK 95 Query 72 ERLAQIRESM 81 +L +IR+S+ Sbjct 96 AKLDEIRKSL 105 >gi|183981985|ref|YP_001850276.1| 35 kDa alanine rich protein [Mycobacterium marinum M] gi|183175311|gb|ACC40421.1| conserved 35 kDa alanine rich protein [Mycobacterium marinum M] Length=271 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 32/56 (58%), Positives = 35/56 (63%), Gaps = 0/56 (0%) Query 26 VPTFESVREKIETRYGTALGATELDAESPQGRRLEDQYAQRQRAAAERLAQIRESM 81 VP+ + VR+KIE RY TALG EL S QGR LE Q A Q A RL QIR SM Sbjct 183 VPSLDEVRDKIERRYATALGQAELAQSSVQGRMLEVQQAGVQMAGHSRLEQIRASM 238 >gi|134102325|ref|YP_001107986.1| phage shock protein A, PspA [Saccharopolyspora erythraea NRRL 2338] gi|291003713|ref|ZP_06561686.1| phage shock protein A, PspA [Saccharopolyspora erythraea NRRL 2338] gi|133914948|emb|CAM05061.1| phage shock protein A, PspA [Saccharopolyspora erythraea NRRL 2338] Length=285 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 32/55 (59%), Positives = 35/55 (64%), Gaps = 0/55 (0%) Query 27 PTFESVREKIETRYGTALGATELDAESPQGRRLEDQYAQRQRAAAERLAQIRESM 81 P+ E VR+KIE RY TALG EL S QGR +E Q A A A RLAQIR SM Sbjct 184 PSLEEVRDKIERRYTTALGEAELAQNSVQGRMMEVQQASVDAAGASRLAQIRASM 238 >gi|331698383|ref|YP_004334622.1| phage shock protein A, PspA [Pseudonocardia dioxanivorans CB1190] gi|326953072|gb|AEA26769.1| phage shock protein A, PspA [Pseudonocardia dioxanivorans CB1190] Length=272 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 30/56 (54%), Positives = 35/56 (63%), Gaps = 0/56 (0%) Query 27 PTFESVREKIETRYGTALGATELDAESPQGRRLEDQYAQRQRAAAERLAQIRESMH 82 P+ E VREKIE RY A+G+ EL S QGR LE Q + A A RL QIR S+H Sbjct 184 PSLEEVREKIERRYANAIGSAELAQNSVQGRMLEVQQSTVDMAGASRLEQIRASLH 239 >gi|240171181|ref|ZP_04749840.1| 35 kDa alanine rich protein [Mycobacterium kansasii ATCC 12478] Length=273 Score = 57.8 bits (138), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 32/56 (58%), Positives = 35/56 (63%), Gaps = 0/56 (0%) Query 26 VPTFESVREKIETRYGTALGATELDAESPQGRRLEDQYAQRQRAAAERLAQIRESM 81 VP+ + VR+KIE RY TALG EL S QGR LE Q A Q A RL QIR SM Sbjct 183 VPSLDEVRDKIERRYATALGQAELAQSSVQGRMLEVQQAGIQMAGHSRLEQIRASM 238 >gi|296139492|ref|YP_003646735.1| phage shock protein PspA [Tsukamurella paurometabola DSM 20162] gi|296027626|gb|ADG78396.1| phage shock protein A, PspA [Tsukamurella paurometabola DSM 20162] Length=272 Score = 57.8 bits (138), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 31/58 (54%), Positives = 34/58 (59%), Gaps = 0/58 (0%) Query 27 PTFESVREKIETRYGTALGATELDAESPQGRRLEDQYAQRQRAAAERLAQIRESMHTD 84 P + VREKIE RY ALG+TEL S QGR E Q A Q A RL QIR SM + Sbjct 184 PNLDEVREKIEKRYANALGSTELAQNSVQGRMAEVQQATVQMAGHSRLEQIRASMQAN 241 >gi|302528494|ref|ZP_07280836.1| phage shock protein A [Streptomyces sp. AA4] gi|302437389|gb|EFL09205.1| phage shock protein A [Streptomyces sp. AA4] Length=281 Score = 57.4 bits (137), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 31/58 (54%), Positives = 36/58 (63%), Gaps = 0/58 (0%) Query 27 PTFESVREKIETRYGTALGATELDAESPQGRRLEDQYAQRQRAAAERLAQIRESMHTD 84 P+ E VR+KIE RY TALG+ EL S QGR +E Q + Q A RL QIR SM D Sbjct 184 PSLEEVRDKIEKRYTTALGSAELAQNSVQGRMMEVQESATQMAGHSRLEQIRASMRGD 241 >gi|257056502|ref|YP_003134334.1| phage shock protein A (IM30), suppresses sigma54-dependent transcription [Saccharomonospora viridis DSM 43017] gi|256586374|gb|ACU97507.1| phage shock protein A (IM30), suppresses sigma54-dependent transcription [Saccharomonospora viridis DSM 43017] Length=280 Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 30/55 (55%), Positives = 36/55 (66%), Gaps = 0/55 (0%) Query 27 PTFESVREKIETRYGTALGATELDAESPQGRRLEDQYAQRQRAAAERLAQIRESM 81 P+ + VR+KIE RY TALGA EL S QGR LE Q++ + A RL QIR SM Sbjct 184 PSLDEVRDKIEKRYSTALGAAELAQNSVQGRMLEVQHSTTELAGRSRLEQIRASM 238 >gi|333919364|ref|YP_004492945.1| Phage shock protein A, PspA [Amycolicicoccus subflavus DQS3-9A1] gi|333481585|gb|AEF40145.1| Phage shock protein A, PspA [Amycolicicoccus subflavus DQS3-9A1] Length=273 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 29/55 (53%), Positives = 36/55 (66%), Gaps = 0/55 (0%) Query 27 PTFESVREKIETRYGTALGATELDAESPQGRRLEDQYAQRQRAAAERLAQIRESM 81 P+ ++VR+KIE RY ALG++EL S QGR +E Q A Q A RL QIR SM Sbjct 184 PSLDAVRDKIERRYANALGSSELAKNSVQGRMMEVQQATVQMAGHSRLEQIRASM 238 >gi|340795941|ref|YP_004761404.1| rod-shaped morphology protein [Corynebacterium variabile DSM 44702] gi|340535851|gb|AEK38331.1| rod-shaped morphology protein [Corynebacterium variabile DSM 44702] Length=294 Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 32/56 (58%), Positives = 33/56 (59%), Gaps = 0/56 (0%) Query 26 VPTFESVREKIETRYGTALGATELDAESPQGRRLEDQYAQRQRAAAERLAQIRESM 81 VPT + VR KIE RY ALGA EL S GR E A R AAA RL QIR SM Sbjct 183 VPTLDGVRAKIEARYANALGAQELTESSVAGRMAEIGQAGRDMAAASRLEQIRASM 238 >gi|226306229|ref|YP_002766189.1| hypothetical protein RER_27420 [Rhodococcus erythropolis PR4] gi|229490766|ref|ZP_04384601.1| 35 kDa protein [Rhodococcus erythropolis SK121] gi|226185346|dbj|BAH33450.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] gi|229322156|gb|EEN87942.1| 35 kDa protein [Rhodococcus erythropolis SK121] Length=270 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 29/55 (53%), Positives = 35/55 (64%), Gaps = 0/55 (0%) Query 27 PTFESVREKIETRYGTALGATELDAESPQGRRLEDQYAQRQRAAAERLAQIRESM 81 P+ ++VR+KIE RY ALG+ EL S QGR +E Q A Q A RL QIR SM Sbjct 185 PSLDAVRDKIERRYADALGSAELAQNSVQGRMMEVQQASVQMAGHSRLEQIRASM 239 >gi|68536198|ref|YP_250903.1| hypothetical protein jk1121 [Corynebacterium jeikeium K411] gi|68263797|emb|CAI37285.1| conserved hypothetical protein [Corynebacterium jeikeium K411] Length=280 Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 32/62 (52%), Positives = 33/62 (54%), Gaps = 0/62 (0%) Query 23 SAGVPTFESVREKIETRYGTALGATELDAESPQGRRLEDQYAQRQRAAAERLAQIRESMH 82 S G P + VREKIE RY ALG EL S QGR E Q A Q A RL QIR M Sbjct 179 SNGSPNLDQVREKIERRYANALGQAELAQNSVQGRMAEVQQAGIQMAGHSRLEQIRAEMQ 238 Query 83 TD 84 D Sbjct 239 GD 240 >gi|319948415|ref|ZP_08022554.1| phage shock protein A, PspA [Dietzia cinnamea P4] gi|319437919|gb|EFV92900.1| phage shock protein A, PspA [Dietzia cinnamea P4] Length=276 Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 33/83 (40%), Positives = 43/83 (52%), Gaps = 1/83 (1%) Query 3 DEPTPPEATTPNSESDPRYDSAG-VPTFESVREKIETRYGTALGATELDAESPQGRRLED 61 ++ E + + +S S G P + VR+KIE RY ALG+ EL S QGR LE Sbjct 159 EQAKMQEQVSASLQSMSELSSGGNTPNLDQVRDKIERRYANALGSAELAQNSVQGRMLEV 218 Query 62 QYAQRQRAAAERLAQIRESMHTD 84 + A Q A RL QIR SM + Sbjct 219 EQASTQMAGHSRLEQIRASMKAE 241 >gi|342858390|ref|ZP_08715045.1| 35kd antigen [Mycobacterium colombiense CECT 3035] gi|342134094|gb|EGT87274.1| 35kd antigen [Mycobacterium colombiense CECT 3035] Length=275 Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 30/56 (54%), Positives = 35/56 (63%), Gaps = 0/56 (0%) Query 26 VPTFESVREKIETRYGTALGATELDAESPQGRRLEDQYAQRQRAAAERLAQIRESM 81 VP+ + VR+KIE RY A+GA EL S QGR LE + A Q A RL QIR SM Sbjct 183 VPSLDEVRDKIERRYANAIGAAELAQGSVQGRMLEVEQAGVQMAGHSRLEQIRASM 238 >gi|254821250|ref|ZP_05226251.1| 35kd antigen [Mycobacterium intracellulare ATCC 13950] Length=275 Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 30/56 (54%), Positives = 35/56 (63%), Gaps = 0/56 (0%) Query 26 VPTFESVREKIETRYGTALGATELDAESPQGRRLEDQYAQRQRAAAERLAQIRESM 81 VP+ + VR+KIE RY A+GA EL S QGR LE + A Q A RL QIR SM Sbjct 183 VPSLDEVRDKIERRYANAIGAAELAQGSVQGRMLEVEQAGVQMAGHSRLEQIRASM 238 Lambda K H 0.306 0.123 0.340 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 131466506940 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40