BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1644 Length=260 Score E Sequences producing significant alignments: (Bits) Value gi|15608782|ref|NP_216160.1| 23S rRNA methyltransferase TsnR [My... 498 5e-139 gi|15841100|ref|NP_336137.1| rRNA methylase, putative [Mycobacte... 494 5e-138 gi|339631700|ref|YP_004723342.1| 23S rRNA methyltransferase [Myc... 491 5e-137 gi|307084225|ref|ZP_07493338.1| 23S rRNA methyltransferase tsnR ... 490 7e-137 gi|289753732|ref|ZP_06513110.1| 23S rRNA methyltransferase tsnR ... 490 9e-137 gi|289745918|ref|ZP_06505296.1| 23S rRNA methyltransferase tsnR ... 461 5e-128 gi|240168029|ref|ZP_04746688.1| putative 23S rRNA methyltransfer... 401 5e-110 gi|254821223|ref|ZP_05226224.1| TsnR protein [Mycobacterium intr... 390 1e-106 gi|183982465|ref|YP_001850756.1| 23S rRNA methyltransferase TsnR... 385 3e-105 gi|118617269|ref|YP_905601.1| 23S rRNA methyltransferase TsnR [M... 384 9e-105 gi|118464222|ref|YP_882308.1| TsnR protein [Mycobacterium avium ... 381 5e-104 gi|296164543|ref|ZP_06847114.1| RNA methyltransferase [Mycobacte... 380 9e-104 gi|41407453|ref|NP_960289.1| TsnR [Mycobacterium avium subsp. pa... 374 9e-102 gi|342860770|ref|ZP_08717420.1| TsnR protein [Mycobacterium colo... 373 2e-101 gi|15827732|ref|NP_301995.1| rRNA methyltransferase [Mycobacteri... 350 1e-94 gi|333990463|ref|YP_004523077.1| 23S rRNA methyltransferase TsnR... 342 3e-92 gi|120404299|ref|YP_954128.1| tRNA/rRNA methyltransferase SpoU [... 329 3e-88 gi|126435572|ref|YP_001071263.1| tRNA/rRNA methyltransferase Spo... 327 7e-88 gi|118468977|ref|YP_888083.1| RNA methyltransferase, TrmH family... 324 8e-87 gi|145224123|ref|YP_001134801.1| tRNA/rRNA methyltransferase Spo... 318 5e-85 gi|108799944|ref|YP_640141.1| tRNA/rRNA methyltransferase SpoU [... 318 6e-85 gi|315444459|ref|YP_004077338.1| rRNA methylase [Mycobacterium s... 314 9e-84 gi|169629410|ref|YP_001703059.1| tRNA/rRNA methyltransferase [My... 281 9e-74 gi|296140117|ref|YP_003647360.1| tRNA/rRNA methyltransferase Spo... 268 8e-70 gi|229492736|ref|ZP_04386537.1| tRNA/rRNA methyltransferase [Rho... 267 9e-70 gi|226306779|ref|YP_002766739.1| RNA methyltransferase [Rhodococ... 265 4e-69 gi|62390273|ref|YP_225675.1| 23S ribosomal RNA methyltransferase... 264 9e-69 gi|145295523|ref|YP_001138344.1| hypothetical protein cgR_1451 [... 264 1e-68 gi|111017974|ref|YP_700946.1| tRNA/rRNA methyltransferase [Rhodo... 261 6e-68 gi|325674243|ref|ZP_08153932.1| SpoU family rRNA methyltransfera... 261 7e-68 gi|226360105|ref|YP_002777883.1| RNA methyltransferase [Rhodococ... 260 1e-67 gi|54023885|ref|YP_118127.1| putative ribosomal RNA methyltransf... 260 2e-67 gi|312139879|ref|YP_004007215.1| tRNA/rRNA methyltransferase [Rh... 259 4e-67 gi|260577991|ref|ZP_05845915.1| rRNA methylase [Corynebacterium ... 253 2e-65 gi|300781270|ref|ZP_07091124.1| TrmH family rRNA methyltransfera... 251 8e-65 gi|343928312|ref|ZP_08767764.1| putative RNA methyltransferase [... 250 1e-64 gi|262202744|ref|YP_003273952.1| tRNA/rRNA methyltransferase Spo... 250 1e-64 gi|227488138|ref|ZP_03918454.1| TrmH family rRNA methyltransfera... 248 5e-64 gi|227541536|ref|ZP_03971585.1| TrmH family rRNA methyltransfera... 248 7e-64 gi|334696740|gb|AEG81537.1| hypothetical protein CULC809_01001 [... 248 8e-64 gi|25028075|ref|NP_738129.1| putative tRNA/rRNA methyltransferas... 248 8e-64 gi|259505627|ref|ZP_05748529.1| rRNA methylase [Corynebacterium ... 248 9e-64 gi|68535913|ref|YP_250618.1| putative rRNA methylase [Corynebact... 248 9e-64 gi|337290627|ref|YP_004629648.1| hypothetical protein CULC22_010... 246 3e-63 gi|38233754|ref|NP_939521.1| putative rRNA methyltransferase [Co... 246 3e-63 gi|300858366|ref|YP_003783349.1| hypothetical protein cpfrc_0094... 246 3e-63 gi|302206081|gb|ADL10423.1| rRNA methyltransferase [Corynebacter... 246 3e-63 gi|172040800|ref|YP_001800514.1| putative rRNA methylase [Coryne... 242 5e-62 gi|305681831|ref|ZP_07404635.1| RNA methyltransferase, TrmH fami... 241 1e-61 gi|225022603|ref|ZP_03711795.1| hypothetical protein CORMATOL_02... 240 1e-61 >gi|15608782|ref|NP_216160.1| 23S rRNA methyltransferase TsnR [Mycobacterium tuberculosis H37Rv] gi|148661440|ref|YP_001282963.1| putative 23S rRNA methyltransferase TsnR [Mycobacterium tuberculosis H37Ra] gi|167968402|ref|ZP_02550679.1| putative 23S rRNA methyltransferase TsnR [Mycobacterium tuberculosis H37Ra] 8 more sequence titles Length=260 Score = 498 bits (1281), Expect = 5e-139, Method: Compositional matrix adjust. Identities = 259/260 (99%), Positives = 260/260 (100%), Gaps = 0/260 (0%) Query 1 VLTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELL 60 +LTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELL Sbjct 1 MLTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELL 60 Query 61 LAAHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIREPG 120 LAAHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIREPG Sbjct 61 LAAHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIREPG 120 Query 121 NAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLRAA 180 NAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLRAA Sbjct 121 NAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLRAA 180 Query 181 GLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAESL 240 GLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAESL Sbjct 181 GLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAESL 240 Query 241 NVAAAAAICLYESARALGRR 260 NVAAAAAICLYESARALGRR Sbjct 241 NVAAAAAICLYESARALGRR 260 >gi|15841100|ref|NP_336137.1| rRNA methylase, putative [Mycobacterium tuberculosis CDC1551] gi|31792831|ref|NP_855324.1| 23S rRNA methyltransferase TsnR [Mycobacterium bovis AF2122/97] gi|121637552|ref|YP_977775.1| putative 23S rRNA methyltransferase tsnR [Mycobacterium bovis BCG str. Pasteur 1173P2] 58 more sequence titles Length=260 Score = 494 bits (1272), Expect = 5e-138, Method: Compositional matrix adjust. Identities = 258/260 (99%), Positives = 259/260 (99%), Gaps = 0/260 (0%) Query 1 VLTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELL 60 +LTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELL Sbjct 1 MLTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELL 60 Query 61 LAAHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIREPG 120 LAAHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIREPG Sbjct 61 LAAHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIREPG 120 Query 121 NAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLRAA 180 NAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLRAA Sbjct 121 NAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLRAA 180 Query 181 GLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAESL 240 GLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHI MSGGAESL Sbjct 181 GLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHIPMSGGAESL 240 Query 241 NVAAAAAICLYESARALGRR 260 NVAAAAAICLYESARALGRR Sbjct 241 NVAAAAAICLYESARALGRR 260 >gi|339631700|ref|YP_004723342.1| 23S rRNA methyltransferase [Mycobacterium africanum GM041182] gi|339331056|emb|CCC26728.1| putative 23S rRNA methyltransferase tsnR [Mycobacterium africanum GM041182] Length=260 Score = 491 bits (1264), Expect = 5e-137, Method: Compositional matrix adjust. Identities = 257/260 (99%), Positives = 258/260 (99%), Gaps = 0/260 (0%) Query 1 VLTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELL 60 +LTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELL Sbjct 1 MLTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELL 60 Query 61 LAAHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIREPG 120 LAAHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIREPG Sbjct 61 LAAHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIREPG 120 Query 121 NAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLRAA 180 NAGTVIRIADAMGAAAVILA RSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLRAA Sbjct 121 NAGTVIRIADAMGAAAVILARRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLRAA 180 Query 181 GLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAESL 240 GLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHI MSGGAESL Sbjct 181 GLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHIPMSGGAESL 240 Query 241 NVAAAAAICLYESARALGRR 260 NVAAAAAICLYESARALGRR Sbjct 241 NVAAAAAICLYESARALGRR 260 >gi|307084225|ref|ZP_07493338.1| 23S rRNA methyltransferase tsnR [Mycobacterium tuberculosis SUMu012] gi|308366170|gb|EFP55021.1| 23S rRNA methyltransferase tsnR [Mycobacterium tuberculosis SUMu012] Length=256 Score = 490 bits (1262), Expect = 7e-137, Method: Compositional matrix adjust. Identities = 255/256 (99%), Positives = 256/256 (100%), Gaps = 0/256 (0%) Query 1 VLTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELL 60 +LTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELL Sbjct 1 MLTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELL 60 Query 61 LAAHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIREPG 120 LAAHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIREPG Sbjct 61 LAAHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIREPG 120 Query 121 NAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLRAA 180 NAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLRAA Sbjct 121 NAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLRAA 180 Query 181 GLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAESL 240 GLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAESL Sbjct 181 GLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAESL 240 Query 241 NVAAAAAICLYESARA 256 NVAAAAAICLYESARA Sbjct 241 NVAAAAAICLYESARA 256 >gi|289753732|ref|ZP_06513110.1| 23S rRNA methyltransferase tsnR [Mycobacterium tuberculosis EAS054] gi|289694319|gb|EFD61748.1| 23S rRNA methyltransferase tsnR [Mycobacterium tuberculosis EAS054] Length=260 Score = 490 bits (1261), Expect = 9e-137, Method: Compositional matrix adjust. Identities = 257/260 (99%), Positives = 258/260 (99%), Gaps = 0/260 (0%) Query 1 VLTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELL 60 +LTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELL Sbjct 1 MLTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELL 60 Query 61 LAAHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIREPG 120 LAAHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIREPG Sbjct 61 LAAHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIREPG 120 Query 121 NAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLRAA 180 NAGTVIRIADAMGAAAVILAGRSVDP NGKCLRASTGSIFAIPVVVAPDVGAAIADLRAA Sbjct 121 NAGTVIRIADAMGAAAVILAGRSVDPCNGKCLRASTGSIFAIPVVVAPDVGAAIADLRAA 180 Query 181 GLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAESL 240 GLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHI MSGGAESL Sbjct 181 GLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHIPMSGGAESL 240 Query 241 NVAAAAAICLYESARALGRR 260 NVAAAAAICLYESARALGRR Sbjct 241 NVAAAAAICLYESARALGRR 260 >gi|289745918|ref|ZP_06505296.1| 23S rRNA methyltransferase tsnR [Mycobacterium tuberculosis 02_1987] gi|289686446|gb|EFD53934.1| 23S rRNA methyltransferase tsnR [Mycobacterium tuberculosis 02_1987] Length=259 Score = 461 bits (1186), Expect = 5e-128, Method: Compositional matrix adjust. Identities = 248/261 (96%), Positives = 250/261 (96%), Gaps = 3/261 (1%) Query 1 VLTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELL 60 +LTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELL Sbjct 1 MLTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELL 60 Query 61 LAAHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIREPG 120 LAAHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIREPG Sbjct 61 LAAHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIREPG 120 Query 121 NAGTVIRIADAMGAAAVILAGRSVD-PYNGKCLRASTGSIFAIPVVVAPDVGAAIADLRA 179 NAGTVIRIADAMGAA + R D P GKCLRASTGSIFAIPVVVAPDVGAAIADLRA Sbjct 121 NAGTVIRIADAMGAA--VADHRVGDHPLGGKCLRASTGSIFAIPVVVAPDVGAAIADLRA 178 Query 180 AGLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAES 239 AGLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHI MSGGAES Sbjct 179 AGLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHIPMSGGAES 238 Query 240 LNVAAAAAICLYESARALGRR 260 LNVAAAAAICLYESARALGRR Sbjct 239 LNVAAAAAICLYESARALGRR 259 >gi|240168029|ref|ZP_04746688.1| putative 23S rRNA methyltransferase [Mycobacterium kansasii ATCC 12478] Length=261 Score = 401 bits (1030), Expect = 5e-110, Method: Compositional matrix adjust. Identities = 211/257 (83%), Positives = 222/257 (87%), Gaps = 0/257 (0%) Query 1 VLTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELL 60 +LTERSARVA AVKLHRHVGRRRA RFLAEGPNLV AA ARGLVREVFVTEVAA+RHE Sbjct 1 MLTERSARVAAAVKLHRHVGRRRANRFLAEGPNLVEAASARGLVREVFVTEVAAQRHETW 60 Query 61 LAAHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIREPG 120 LA H+A VHLVTERAAKALSDTVTPAGLVAVCD+P TRL+DVL SP+LIA VEI EPG Sbjct 61 LAGHDAPVHLVTERAAKALSDTVTPAGLVAVCDIPTTRLDDVLTRSPRLIATAVEISEPG 120 Query 121 NAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLRAA 180 NAGT+IRIADAMGAAAVILAG SVDPYNGKCLRAS GSIF IPVV D AAI LR A Sbjct 121 NAGTLIRIADAMGAAAVILAGHSVDPYNGKCLRASAGSIFNIPVVAVADTHAAIVSLRGA 180 Query 181 GLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAESL 240 GLQVLATAVDGE +LDDAD LL TAWLFGPE+HGLSAEIA ADHRV I MSG AESL Sbjct 181 GLQVLATAVDGETSLDDADPLLGVATAWLFGPESHGLSAEIAGAADHRVRIPMSGRAESL 240 Query 241 NVAAAAAICLYESARAL 257 N+AAAAAICLY+SARAL Sbjct 241 NIAAAAAICLYQSARAL 257 >gi|254821223|ref|ZP_05226224.1| TsnR protein [Mycobacterium intracellulare ATCC 13950] Length=268 Score = 390 bits (1002), Expect = 1e-106, Method: Compositional matrix adjust. Identities = 203/257 (79%), Positives = 222/257 (87%), Gaps = 0/257 (0%) Query 1 VLTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELL 60 VLTERSARVA AVKLHRHVGRRRAGRFLAEGPNLV AA RGLVR+VFVTEVA +RH L Sbjct 6 VLTERSARVAAAVKLHRHVGRRRAGRFLAEGPNLVEAASRRGLVRDVFVTEVAEQRHASL 65 Query 61 LAAHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIREPG 120 LA + VH VTERAAKALSDTVTPAGLVAVCD+PAT L+DVLAG+PQL+AV VEI EPG Sbjct 66 LAGLDCPVHPVTERAAKALSDTVTPAGLVAVCDMPATHLDDVLAGAPQLLAVAVEIGEPG 125 Query 121 NAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLRAA 180 NAGT+IR+ADAMGAA VIL GRSVDPYNGKCLRAS GSIF +PVVVAPD AA+ +RAA Sbjct 126 NAGTLIRLADAMGAAGVILGGRSVDPYNGKCLRASAGSIFCVPVVVAPDALAAVDAVRAA 185 Query 181 GLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAESL 240 GLQ LAT VDGE LD+A LL PTAWLFGPE+HGL +EIA+ ADHR+ I MSGGAESL Sbjct 186 GLQALATTVDGERRLDEAGELLGRPTAWLFGPESHGLPSEIASAADHRLRIPMSGGAESL 245 Query 241 NVAAAAAICLYESARAL 257 NVA+AAAICLY+SARAL Sbjct 246 NVASAAAICLYQSARAL 262 >gi|183982465|ref|YP_001850756.1| 23S rRNA methyltransferase TsnR [Mycobacterium marinum M] gi|183175791|gb|ACC40901.1| 23S rRNA methyltransferase TsnR [Mycobacterium marinum M] Length=275 Score = 385 bits (989), Expect = 3e-105, Method: Compositional matrix adjust. Identities = 195/257 (76%), Positives = 222/257 (87%), Gaps = 0/257 (0%) Query 1 VLTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELL 60 +LTERSARV+ A KL RHVGRRR RFLAEGPNLV AA ARGL+RE++VTE A +RHE L Sbjct 15 ILTERSARVSAAAKLQRHVGRRRTSRFLAEGPNLVEAAAARGLIRELYVTEAAEQRHEPL 74 Query 61 LAAHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIREPG 120 LA +A V++VTERAAKALSDTVTP+GLVAVC++P T L +VL+G+P+L+AV VEI EPG Sbjct 75 LARQDAPVYVVTERAAKALSDTVTPSGLVAVCEMPTTGLAEVLSGAPRLVAVAVEIGEPG 134 Query 121 NAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLRAA 180 NAGT+IRIADAMGA AV+LAG SVDPYNGKCLRAS GSIFAIPV+VAPD AA+ LR A Sbjct 135 NAGTLIRIADAMGANAVVLAGNSVDPYNGKCLRASAGSIFAIPVIVAPDTSAALGALRGA 194 Query 181 GLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAESL 240 GLQVLA+ +DGE +LDD D+LL PTAWLFGPEAHGLSAE+AA A HRV I MSGGAESL Sbjct 195 GLQVLASVLDGEKSLDDIDQLLEAPTAWLFGPEAHGLSAEVAAAAHHRVRIPMSGGAESL 254 Query 241 NVAAAAAICLYESARAL 257 NVAAAAAICLY+SARAL Sbjct 255 NVAAAAAICLYQSARAL 271 >gi|118617269|ref|YP_905601.1| 23S rRNA methyltransferase TsnR [Mycobacterium ulcerans Agy99] gi|118569379|gb|ABL04130.1| 23S rRNA methyltransferase TsnR [Mycobacterium ulcerans Agy99] Length=275 Score = 384 bits (985), Expect = 9e-105, Method: Compositional matrix adjust. Identities = 194/257 (76%), Positives = 221/257 (86%), Gaps = 0/257 (0%) Query 1 VLTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELL 60 +LTERSARV+ A KL RHVGRRR RFLAEGPNLV AA ARGL+RE++VTE A +RHE L Sbjct 15 ILTERSARVSAAAKLQRHVGRRRTSRFLAEGPNLVEAAAARGLIRELYVTEAAEQRHEPL 74 Query 61 LAAHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIREPG 120 LA +A V++VTERAAKALSDTVTP+GLVAVC++P T L +VL+G+P+L+AV VEI EPG Sbjct 75 LARQDAPVYVVTERAAKALSDTVTPSGLVAVCEMPTTGLAEVLSGAPRLVAVAVEIGEPG 134 Query 121 NAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLRAA 180 NAGT+IRIADAMGA AV+LAG SVDPYNGKCLRAS GSIFAIPV+VAPD AA+ LR A Sbjct 135 NAGTLIRIADAMGANAVVLAGNSVDPYNGKCLRASAGSIFAIPVIVAPDTSAALGALRGA 194 Query 181 GLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAESL 240 GLQ LA+ +DGE +LDD D+LL PTAWLFGPEAHGLSAE+AA A HRV I MSGGAESL Sbjct 195 GLQALASVLDGEKSLDDIDQLLEAPTAWLFGPEAHGLSAEVAAAAHHRVRIPMSGGAESL 254 Query 241 NVAAAAAICLYESARAL 257 NVAAAAAICLY+SARAL Sbjct 255 NVAAAAAICLYQSARAL 271 >gi|118464222|ref|YP_882308.1| TsnR protein [Mycobacterium avium 104] gi|254775574|ref|ZP_05217090.1| TsnR protein [Mycobacterium avium subsp. avium ATCC 25291] gi|118165509|gb|ABK66406.1| TsnR protein [Mycobacterium avium 104] Length=263 Score = 381 bits (979), Expect = 5e-104, Method: Compositional matrix adjust. Identities = 196/257 (77%), Positives = 222/257 (87%), Gaps = 0/257 (0%) Query 1 VLTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELL 60 +LTERS RVA A KLHRHVGRRRA RFLAEGPNLV AA RGLVR+VFVTE A +R+ L Sbjct 1 MLTERSGRVAAAAKLHRHVGRRRAARFLAEGPNLVEAAAGRGLVRDVFVTEAAQQRYAPL 60 Query 61 LAAHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIREPG 120 LAA + VHL+TERAAKALSDTVTPAGLVAVCDLPAT L DVLAGSP+LIAV V+I EPG Sbjct 61 LAALDCPVHLITERAAKALSDTVTPAGLVAVCDLPATGLRDVLAGSPRLIAVAVQISEPG 120 Query 121 NAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLRAA 180 NAGT+IR++DAMGAA V+LAG SVDPYNGKCLRAS GSIF++PVV APD+ A+A +R A Sbjct 121 NAGTLIRLSDAMGAAGVLLAGHSVDPYNGKCLRASAGSIFSVPVVAAPDLREAVAAVREA 180 Query 181 GLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAESL 240 GLQ+LAT VDGE+ LD A LLA+PTAWLFGPE+HGL +E+AA ADHRV I M+GGAESL Sbjct 181 GLQLLATTVDGEVRLDRAGELLAKPTAWLFGPESHGLPSEVAAAADHRVRIPMAGGAESL 240 Query 241 NVAAAAAICLYESARAL 257 NVA+AAAICLY+SARAL Sbjct 241 NVASAAAICLYQSARAL 257 >gi|296164543|ref|ZP_06847114.1| RNA methyltransferase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295900143|gb|EFG79578.1| RNA methyltransferase [Mycobacterium parascrofulaceum ATCC BAA-614] Length=265 Score = 380 bits (977), Expect = 9e-104, Method: Compositional matrix adjust. Identities = 199/258 (78%), Positives = 218/258 (85%), Gaps = 0/258 (0%) Query 1 VLTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELL 60 VLTERSARVA AVKLHRHVGRRRAGRFLAEG NLV AA ARGLVR+VFVTE A RR+ L Sbjct 3 VLTERSARVAAAVKLHRHVGRRRAGRFLAEGANLVEAAAARGLVRDVFVTEAAERRYAAL 62 Query 61 LAAHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIREPG 120 L A VHLV+ERAAKALSDTVTPAGLVAVCD+PAT+L DVLAGSP+LIAV VEI EPG Sbjct 63 LGAQRCPVHLVSERAAKALSDTVTPAGLVAVCDMPATQLADVLAGSPRLIAVAVEIGEPG 122 Query 121 NAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLRAA 180 NAGTVIR+A AMGA VIL G SVDPYNGKCLRASTGSIF+IPVV PDV AA+ LR A Sbjct 123 NAGTVIRLAAAMGAHGVILGGHSVDPYNGKCLRASTGSIFSIPVVTEPDVPAALDALRGA 182 Query 181 GLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAESL 240 GLQVLAT VDGE LD++ LL PTAWLFGPE+ GL +++A ADHR+ I MSGGAESL Sbjct 183 GLQVLATTVDGEKRLDESADLLGRPTAWLFGPESRGLPSDVAGAADHRMRIPMSGGAESL 242 Query 241 NVAAAAAICLYESARALG 258 NVA+AAAICLY+SA+ALG Sbjct 243 NVASAAAICLYQSAQALG 260 >gi|41407453|ref|NP_960289.1| TsnR [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395805|gb|AAS03672.1| TsnR [Mycobacterium avium subsp. paratuberculosis K-10] gi|336457807|gb|EGO36801.1| rRNA methylase [Mycobacterium avium subsp. paratuberculosis S397] Length=263 Score = 374 bits (959), Expect = 9e-102, Method: Compositional matrix adjust. Identities = 195/257 (76%), Positives = 219/257 (86%), Gaps = 0/257 (0%) Query 1 VLTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELL 60 +LTERS RVA A KLHRHVGRRRA RFLAEG NLV AA RGLVR+VFVTE A +R+ L Sbjct 1 MLTERSGRVAAAAKLHRHVGRRRAARFLAEGSNLVEAAAGRGLVRDVFVTEAAQQRYAPL 60 Query 61 LAAHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIREPG 120 LAA + VHLVTERAAKALSDTVTPAGLVAVCDLPAT L DVLAGSP+LIAV V+I EPG Sbjct 61 LAALDCPVHLVTERAAKALSDTVTPAGLVAVCDLPATGLRDVLAGSPRLIAVAVQISEPG 120 Query 121 NAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLRAA 180 NAGT+IR+ADAMGAA V+LAG SVDPYNGKCLRAS GSIF++PV APD+ A+A +R A Sbjct 121 NAGTLIRLADAMGAAGVLLAGHSVDPYNGKCLRASAGSIFSVPVAAAPDLREAVAAVREA 180 Query 181 GLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAESL 240 GLQ+LAT VDGE+ LD A LLA+PTAWLFGPE+HGL + +AA ADHRV I M+GGAESL Sbjct 181 GLQLLATTVDGEVRLDRAGELLAKPTAWLFGPESHGLPSAVAAAADHRVCIPMAGGAESL 240 Query 241 NVAAAAAICLYESARAL 257 NVA+AAAICLY+SARAL Sbjct 241 NVASAAAICLYQSARAL 257 >gi|342860770|ref|ZP_08717420.1| TsnR protein [Mycobacterium colombiense CECT 3035] gi|342131794|gb|EGT85051.1| TsnR protein [Mycobacterium colombiense CECT 3035] Length=271 Score = 373 bits (957), Expect = 2e-101, Method: Compositional matrix adjust. Identities = 195/260 (75%), Positives = 217/260 (84%), Gaps = 3/260 (1%) Query 1 VLTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELL 60 VLTERSARVA AVKLHRHVGRRR GRFLAEGPNLV AA +RGLVR+VFVTEVA +RH L Sbjct 6 VLTERSARVAAAVKLHRHVGRRRTGRFLAEGPNLVEAAASRGLVRDVFVTEVAQQRHASL 65 Query 61 LAAHEAS---VHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIR 117 LA ++ VH VT+RAAKALSDTVTPAGLVAVC+ P T L DVLAG P L+AV VEI Sbjct 66 LATLTSAGCPVHPVTDRAAKALSDTVTPAGLVAVCETPQTHLHDVLAGPPALVAVAVEIS 125 Query 118 EPGNAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADL 177 EPGNAGT+IR+ADAMGAA VIL G SVDPYNGKCLRAS GSIF++PVV APD AA+ L Sbjct 126 EPGNAGTLIRLADAMGAAGVILGGHSVDPYNGKCLRASAGSIFSVPVVAAPDTLAAVGAL 185 Query 178 RAAGLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGA 237 RAAGLQ+LAT VDGE LD+A LL PTAWLFGPE+HGL ++AA ADHR+ I M+GGA Sbjct 186 RAAGLQLLATTVDGETRLDEATDLLGVPTAWLFGPESHGLPTDVAAAADHRMRIPMAGGA 245 Query 238 ESLNVAAAAAICLYESARAL 257 ESLNVA+AAAICLY+SARAL Sbjct 246 ESLNVASAAAICLYQSARAL 265 >gi|15827732|ref|NP_301995.1| rRNA methyltransferase [Mycobacterium leprae TN] gi|221230209|ref|YP_002503625.1| putative rRNA methyltransferase [Mycobacterium leprae Br4923] gi|13093283|emb|CAC31778.1| putative rRNA methyltransferase [Mycobacterium leprae] gi|219933316|emb|CAR71492.1| putative rRNA methyltransferase [Mycobacterium leprae Br4923] Length=259 Score = 350 bits (897), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 187/257 (73%), Positives = 209/257 (82%), Gaps = 0/257 (0%) Query 1 VLTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELL 60 +LTERSARV AVKLHR V RRR RFLAEGPNLV AA+ GLVR+VFVTEVAA+RH + Sbjct 1 MLTERSARVVAAVKLHRQVARRRVRRFLAEGPNLVEAAIVSGLVRDVFVTEVAAQRHATV 60 Query 61 LAAHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIREPG 120 LA + VH V+ERAAKALSDTVTP GL+AVC++P TRL VLAGSPQL+ VEI EPG Sbjct 61 LATLKCPVHPVSERAAKALSDTVTPTGLIAVCEMPTTRLATVLAGSPQLVVAAVEISEPG 120 Query 121 NAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLRAA 180 NAGTVIRIADAMGAAAVI G +VDPYNGKCLR+S GSIF+I VVVA D AA+ +LRAA Sbjct 121 NAGTVIRIADAMGAAAVIFGGYTVDPYNGKCLRSSAGSIFSITVVVASDAYAAVTELRAA 180 Query 181 GLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAESL 240 GLQVLAT VDGE +LD+A LL +PTAWLFG E HGLS EIA AD+RV I M GG ESL Sbjct 181 GLQVLATMVDGETSLDEAKPLLGKPTAWLFGSEPHGLSTEIAEAADYRVRIPMVGGVESL 240 Query 241 NVAAAAAICLYESARAL 257 NVAA AAICLY+S+RAL Sbjct 241 NVAATAAICLYQSSRAL 257 >gi|333990463|ref|YP_004523077.1| 23S rRNA methyltransferase TsnR [Mycobacterium sp. JDM601] gi|333486432|gb|AEF35824.1| 23S rRNA methyltransferase TsnR [Mycobacterium sp. JDM601] Length=262 Score = 342 bits (878), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 182/256 (72%), Positives = 209/256 (82%), Gaps = 0/256 (0%) Query 1 VLTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELL 60 +LTERSARV AVKLHRHV R+R RFLAEGPNLV AA+ RGL EVF TE AA+RH L Sbjct 1 MLTERSARVVAAVKLHRHVARKREQRFLAEGPNLVEAAIRRGLAVEVFATESAAQRHGEL 60 Query 61 LAAHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIREPG 120 LA+ A VH V++RAAKALSDTVTPAGLVAVC +P L +LA +P L+AV V I EPG Sbjct 61 LASVRAPVHQVSDRAAKALSDTVTPAGLVAVCTVPEPDLGGLLADAPHLVAVAVGIGEPG 120 Query 121 NAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLRAA 180 NAGT+IRIADA GA+ V+L G SVDPYNGKCLRAS GS+F +PVVVA D A +A LR + Sbjct 121 NAGTLIRIADATGASLVVLTGNSVDPYNGKCLRASAGSVFNVPVVVAADTDAVLAALRES 180 Query 181 GLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAESL 240 GLQ+LATA+DG+++LDDAD +L PTAWLFGPE+HGL A +AA ADHRVHI MSGGAESL Sbjct 181 GLQLLATALDGDLSLDDADPVLTAPTAWLFGPESHGLPAAVAAAADHRVHIPMSGGAESL 240 Query 241 NVAAAAAICLYESARA 256 NVAAAAAICLY+SARA Sbjct 241 NVAAAAAICLYQSARA 256 >gi|120404299|ref|YP_954128.1| tRNA/rRNA methyltransferase SpoU [Mycobacterium vanbaalenii PYR-1] gi|119957117|gb|ABM14122.1| tRNA/rRNA methyltransferase (SpoU) [Mycobacterium vanbaalenii PYR-1] Length=248 Score = 329 bits (843), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 175/248 (71%), Positives = 201/248 (82%), Gaps = 4/248 (1%) Query 9 VATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELLLAAHEASV 68 +A AVKLHRH GRRRA RFLAEGPNLV AAL RGLV EVF TE AA + LL A ASV Sbjct 1 MAAAVKLHRHTGRRRAARFLAEGPNLVEAALRRGLVHEVFATEGAAAKFAALLGA--ASV 58 Query 69 HLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIREPGNAGTVIRI 128 HLVT++AAKALSDTVTP GLVAVC +P L+ VLAG+P+L+AV V I EPGNAGT+IR+ Sbjct 59 HLVTDKAAKALSDTVTPVGLVAVCSIPEADLDQVLAGNPKLVAVPVGISEPGNAGTLIRV 118 Query 129 ADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLRAAGLQVLATA 188 ADAMGA AV+LAG SVDPYNGKCLRAS GSIF+IPV+ APD AA+ L+ AGLQVLAT Sbjct 119 ADAMGADAVVLAGDSVDPYNGKCLRASAGSIFSIPVLSAPDAVAAVTKLKDAGLQVLATV 178 Query 189 VDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAESLNVAAAAAI 248 +DG ++L+DAD L+ PTAWLFGPEAHGL A++A LA V I M G AESLNVA+AAAI Sbjct 179 LDGPVSLEDAD--LSVPTAWLFGPEAHGLPADVAGLATAGVRIPMPGNAESLNVASAAAI 236 Query 249 CLYESARA 256 CLY+SAR+ Sbjct 237 CLYQSARS 244 >gi|126435572|ref|YP_001071263.1| tRNA/rRNA methyltransferase SpoU [Mycobacterium sp. JLS] gi|126235372|gb|ABN98772.1| tRNA/rRNA methyltransferase (SpoU) [Mycobacterium sp. JLS] Length=248 Score = 327 bits (839), Expect = 7e-88, Method: Compositional matrix adjust. Identities = 177/246 (72%), Positives = 197/246 (81%), Gaps = 4/246 (1%) Query 12 AVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELLLAAHEASVHLV 71 AVKLHRHVGRRRA RFLAEGPNLV AAL RG+V EVF TE AA R LL A VHLV Sbjct 4 AVKLHRHVGRRRAARFLAEGPNLVEAALRRGVVSEVFATEDAAARFAALLVG--ADVHLV 61 Query 72 TERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIREPGNAGTVIRIADA 131 TERAAKALSDTVTP GLVAVC +P L+++L SP+L+AV VE EPGNAGT+IR+ADA Sbjct 62 TERAAKALSDTVTPVGLVAVCRMPEVSLDEILGASPRLVAVAVETSEPGNAGTLIRLADA 121 Query 132 MGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLRAAGLQVLATAVDG 191 MGA AVILAG SVDPYNGKCLRAS GSIF + VV APD +A L AGL VLAT +DG Sbjct 122 MGADAVILAGNSVDPYNGKCLRASAGSIFGVSVVEAPDTAGLVAALHGAGLTVLATTLDG 181 Query 192 EMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAESLNVAAAAAICLY 251 E++LDDA+ L+ PTAWLFG EAHGL+ E+AALAD RV I M+G AESLNVAAAAAICLY Sbjct 182 EVSLDDAE--LSGPTAWLFGAEAHGLAPEVAALADARVTIPMAGSAESLNVAAAAAICLY 239 Query 252 ESARAL 257 +SARAL Sbjct 240 QSARAL 245 >gi|118468977|ref|YP_888083.1| RNA methyltransferase, TrmH family protein [Mycobacterium smegmatis str. MC2 155] gi|118170264|gb|ABK71160.1| RNA methyltransferase, TrmH family protein [Mycobacterium smegmatis str. MC2 155] Length=252 Score = 324 bits (831), Expect = 8e-87, Method: Compositional matrix adjust. Identities = 177/251 (71%), Positives = 195/251 (78%), Gaps = 4/251 (1%) Query 12 AVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELLLAAHEASVHLV 71 AVKLHRHVGRRRA RFLAEGPNLV AAL RGLV EVF TE A R LLA +A V V Sbjct 4 AVKLHRHVGRRRAARFLAEGPNLVEAALRRGLVSEVFATEAALDRFGALLA--DAPVTPV 61 Query 72 TERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIREPGNAGTVIRIADA 131 TERAAKALSDTVTP GLVAVC LP L+DVLAG LIAV V++ EPGNAGT+IR+ADA Sbjct 62 TERAAKALSDTVTPVGLVAVCRLPEVSLDDVLAGPAGLIAVPVQLSEPGNAGTLIRVADA 121 Query 132 MGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLRAAGLQVLATAVDG 191 MGAAAV+LAG SVDPYN KCLRAS GSIF+IPV+ PD + LR AGL+VLAT VDG Sbjct 122 MGAAAVVLAGNSVDPYNSKCLRASAGSIFSIPVISDPDEARVVQRLRDAGLRVLATTVDG 181 Query 192 EMALDDAD--RLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAESLNVAAAAAIC 249 E LDD D L EPTAWLFGPEAHGLS ++AA+A RV I M G AESLN+A+AA+IC Sbjct 182 EADLDDPDLEAELTEPTAWLFGPEAHGLSTDLAAMAHRRVQIPMPGHAESLNIASAASIC 241 Query 250 LYESARALGRR 260 LY+SARA RR Sbjct 242 LYQSARAQRRR 252 >gi|145224123|ref|YP_001134801.1| tRNA/rRNA methyltransferase SpoU [Mycobacterium gilvum PYR-GCK] gi|145216609|gb|ABP46013.1| tRNA/rRNA methyltransferase (SpoU) [Mycobacterium gilvum PYR-GCK] Length=252 Score = 318 bits (815), Expect = 5e-85, Method: Compositional matrix adjust. Identities = 172/244 (71%), Positives = 191/244 (79%), Gaps = 4/244 (1%) Query 9 VATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELLLAAHEASV 68 +A AVKLHRH GRRRA RFLAEGPNLV AAL RGLV EVF TE AA R LLA A V Sbjct 1 MAAAVKLHRHTGRRRAARFLAEGPNLVEAALRRGLVSEVFATESAADRFGPLLAG--APV 58 Query 69 HLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIREPGNAGTVIRI 128 HLVTE+AAKALSDTVTP GLVAVC LP L +VLAG P L+AV V I EPGNAGTVIR+ Sbjct 59 HLVTEKAAKALSDTVTPVGLVAVCTLPEVDLTEVLAGEPTLVAVPVGISEPGNAGTVIRV 118 Query 129 ADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLRAAGLQVLATA 188 ADAMGA AV+LAG SVDPYNGKCLRAS GSIF+IPV+ D + L+ AGLQVLAT Sbjct 119 ADAMGADAVVLAGDSVDPYNGKCLRASAGSIFSIPVISHHDAADVVTQLKDAGLQVLATV 178 Query 189 VDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAESLNVAAAAAI 248 + G ++LD+ D L+ PTAWLFGPEAHGL AE+AALA V I M+GGAESLNVA+AAAI Sbjct 179 LGGSVSLDEVD--LSGPTAWLFGPEAHGLPAEVAALATAGVEIPMTGGAESLNVASAAAI 236 Query 249 CLYE 252 CLY+ Sbjct 237 CLYQ 240 >gi|108799944|ref|YP_640141.1| tRNA/rRNA methyltransferase SpoU [Mycobacterium sp. MCS] gi|119869054|ref|YP_939006.1| tRNA/rRNA methyltransferase SpoU [Mycobacterium sp. KMS] gi|108770363|gb|ABG09085.1| tRNA/rRNA methyltransferase (SpoU) [Mycobacterium sp. MCS] gi|119695143|gb|ABL92216.1| tRNA/rRNA methyltransferase (SpoU) [Mycobacterium sp. KMS] Length=248 Score = 318 bits (814), Expect = 6e-85, Method: Compositional matrix adjust. Identities = 178/249 (72%), Positives = 200/249 (81%), Gaps = 4/249 (1%) Query 9 VATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELLLAAHEASV 68 +A AVKLHRHVGRRRA RFLAEGPNLV AAL RG+V EVF TE AA R LLA + V Sbjct 1 MAAAVKLHRHVGRRRAARFLAEGPNLVEAALRRGVVSEVFATEDAAARFAALLAGAD--V 58 Query 69 HLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIREPGNAGTVIRI 128 HLVTERAAKALSDTVTP GLVAVC +P L++VL SP+L+AV VE EPGNAGT+IR+ Sbjct 59 HLVTERAAKALSDTVTPVGLVAVCRMPEVSLDEVLGASPRLVAVAVETSEPGNAGTLIRL 118 Query 129 ADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLRAAGLQVLATA 188 ADAMGA AVILAG SVDPYNGKCLRAS GSIF + VV APD +A L AGL VLAT Sbjct 119 ADAMGADAVILAGNSVDPYNGKCLRASAGSIFGVSVVEAPDTAGLVAALHGAGLTVLATM 178 Query 189 VDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAESLNVAAAAAI 248 +DGE++LDDA+ L+ PTAWLFG EAHGL+ ++AALAD RV I M+G AESLNVAAAAAI Sbjct 179 LDGEVSLDDAE--LSGPTAWLFGAEAHGLAPDVAALADARVTIPMAGSAESLNVAAAAAI 236 Query 249 CLYESARAL 257 CLY+SARAL Sbjct 237 CLYQSARAL 245 >gi|315444459|ref|YP_004077338.1| rRNA methylase [Mycobacterium sp. Spyr1] gi|315262762|gb|ADT99503.1| rRNA methylase [Mycobacterium sp. Spyr1] Length=249 Score = 314 bits (804), Expect = 9e-84, Method: Compositional matrix adjust. Identities = 171/248 (69%), Positives = 191/248 (78%), Gaps = 4/248 (1%) Query 9 VATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELLLAAHEASV 68 +A AVKLHRH GRRRA RFLAEGPNLV AAL RGLV EVF TE AA R LLA A V Sbjct 1 MAAAVKLHRHTGRRRAARFLAEGPNLVEAALRRGLVSEVFATESAADRFGPLLAG--APV 58 Query 69 HLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIREPGNAGTVIRI 128 HLVTE+AAKALSDTVTP GLVAVC LP L +VL G P L+AV V I EPGNAGTVIR+ Sbjct 59 HLVTEKAAKALSDTVTPVGLVAVCTLPEVDLAEVLTGEPTLVAVPVGISEPGNAGTVIRV 118 Query 129 ADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLRAAGLQVLATA 188 ADAMGA AV+LAG SVDPYNGKCLRAS GSIF+IPV+ D + L+ +GLQVLAT Sbjct 119 ADAMGADAVVLAGDSVDPYNGKCLRASAGSIFSIPVISHHDAVGVVTQLKGSGLQVLATV 178 Query 189 VDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAESLNVAAAAAI 248 + G + LD+ D L+ PTAWLFGPEAHGL A++ ALA V I M+GGAESLNVA+AAAI Sbjct 179 LGGSVPLDEVD--LSGPTAWLFGPEAHGLPADVVALATAGVEIPMAGGAESLNVASAAAI 236 Query 249 CLYESARA 256 CLY+SA A Sbjct 237 CLYQSAAA 244 >gi|169629410|ref|YP_001703059.1| tRNA/rRNA methyltransferase [Mycobacterium abscessus ATCC 19977] gi|169241377|emb|CAM62405.1| Possible tRNA/rRNA methyltransferase [Mycobacterium abscessus] Length=250 Score = 281 bits (718), Expect = 9e-74, Method: Compositional matrix adjust. Identities = 154/244 (64%), Positives = 178/244 (73%), Gaps = 2/244 (0%) Query 12 AVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELLLAAHEASVHLV 71 AVKLHR RRRAG FLAEGPNLV AAL G V +F T+ A R LLA EA V V Sbjct 4 AVKLHRPAARRRAGLFLAEGPNLVEAALRSGAVERIFATDAAIERFVDLLA--EAPVRRV 61 Query 72 TERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIREPGNAGTVIRIADA 131 TERAAKALSDTVTP GLVA C + V A SP+ + V V+I EPGNAGT+IR+ADA Sbjct 62 TERAAKALSDTVTPVGLVAQCRTVVSTWSQVTARSPRFVIVAVDISEPGNAGTLIRVADA 121 Query 132 MGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLRAAGLQVLATAVDG 191 MGA AV+LAG SVDP+NGK LRAS GSIF IPVV DVGA ADL G+ +LAT +DG Sbjct 122 MGADAVVLAGNSVDPFNGKSLRASAGSIFNIPVVPEGDVGAIAADLAQTGVALLATTLDG 181 Query 192 EMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAESLNVAAAAAICLY 251 +++LD+AD +LA P AW FG EAHGL AALA HR++I M GGAESLN+A+AA+ICLY Sbjct 182 DLSLDEADAVLAGPCAWFFGNEAHGLDGATAALATHRINIPMRGGAESLNLASAASICLY 241 Query 252 ESAR 255 +AR Sbjct 242 ATAR 245 >gi|296140117|ref|YP_003647360.1| tRNA/rRNA methyltransferase SpoU [Tsukamurella paurometabola DSM 20162] gi|296028251|gb|ADG79021.1| tRNA/rRNA methyltransferase (SpoU) [Tsukamurella paurometabola DSM 20162] Length=265 Score = 268 bits (684), Expect = 8e-70, Method: Compositional matrix adjust. Identities = 152/256 (60%), Positives = 185/256 (73%), Gaps = 8/256 (3%) Query 1 VLTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELL 60 + TER+ RV +A KL R GRR+AG FLAEG N V +ALA GLV E+FVTE A R+ L Sbjct 12 LFTERTPRVVSASKLLRAAGRRKAGLFLAEGSNAVTSALAAGLVDEIFVTEDGAARYPDL 71 Query 61 LAAHEASVHLVTERAAKALSDTVTPAGLVAVCD-LPATRLEDVLAGSPQLIAVTVEIREP 119 L V VT+RA + LSDTVTP G+VAVC LP R+ D +L+AV V++ EP Sbjct 72 LTGR---VAYVTDRAMRGLSDTVTPPGIVAVCRALPEGRVPD----GARLVAVPVDVAEP 124 Query 120 GNAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLRA 179 GNAGTVIR+ADA+GA AV+LAG +VDP NGK +RAS GS+F +PVV D AAIA L+ Sbjct 125 GNAGTVIRVADAVGADAVLLAGDAVDPMNGKVVRASAGSVFHLPVVQERDASAAIAQLKE 184 Query 180 AGLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAES 239 +GL VLATA DGE++LDDAD +LA PTAWLFG EAHGL + A ADHR+ I + G AES Sbjct 185 SGLTVLATAADGEVSLDDADEMLAAPTAWLFGNEAHGLPRGLQAAADHRIAIPIRGRAES 244 Query 240 LNVAAAAAICLYESAR 255 LN+A AA+ICLY S+R Sbjct 245 LNLATAASICLYASSR 260 >gi|229492736|ref|ZP_04386537.1| tRNA/rRNA methyltransferase [Rhodococcus erythropolis SK121] gi|229320395|gb|EEN86215.1| tRNA/rRNA methyltransferase [Rhodococcus erythropolis SK121] Length=276 Score = 267 bits (683), Expect = 9e-70, Method: Compositional matrix adjust. Identities = 156/268 (59%), Positives = 188/268 (71%), Gaps = 10/268 (3%) Query 2 LTERSARVATAVKLHRHVGRRRAGRFLAEGPN----LVAAALARGLVR---EVFVTEVAA 54 LTER+ RV +AVKL R RR+AGRFL EG N L+ AL+ G R ++F TE AA Sbjct 4 LTERTPRVVSAVKLLRTAERRKAGRFLVEGENSVTELLNGALSNGEARPVHDLFYTEDAA 63 Query 55 RRHELLLA---AHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIA 111 R++ ++ SV LVT+RA KALSDTVTP GLVAV DL L + +L+A Sbjct 64 ERYQHVIDRALTAGVSVALVTDRAIKALSDTVTPPGLVAVSDLLDVPLSAAVHQETRLLA 123 Query 112 VTVEIREPGNAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVG 171 V VE+ EPGNAGTVIRIADA+GA A ILAG SVDP+NGK +R+S GS+F +PVV D Sbjct 124 VPVEVNEPGNAGTVIRIADAVGADAAILAGDSVDPHNGKVVRSSAGSLFHLPVVRDRDTV 183 Query 172 AAIADLRAAGLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHI 231 + I +RAAG+Q+LATA DGE+ LD+AD LL++PTAWLFG EAHGL IAA ADHRV I Sbjct 184 SVIEQIRAAGIQILATAADGEVDLDEADELLSKPTAWLFGNEAHGLDPAIAAQADHRVRI 243 Query 232 LMSGGAESLNVAAAAAICLYESARALGR 259 + G AESLN+A AAAICLY SAR R Sbjct 244 PIHGRAESLNLATAAAICLYASARVQNR 271 >gi|226306779|ref|YP_002766739.1| RNA methyltransferase [Rhodococcus erythropolis PR4] gi|226185896|dbj|BAH34000.1| putative RNA methyltransferase [Rhodococcus erythropolis PR4] Length=276 Score = 265 bits (678), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 157/268 (59%), Positives = 189/268 (71%), Gaps = 10/268 (3%) Query 2 LTERSARVATAVKLHRHVGRRRAGRFLAEGPN----LVAAALARGLVR---EVFVTEVAA 54 LTER+ RV +AVKL R RR+AGRFL EG N L+ AL+ G R ++F TE AA Sbjct 4 LTERTPRVVSAVKLLRTAERRKAGRFLVEGENSVTELLNGALSNGEARPVHDLFYTEDAA 63 Query 55 RRHELLLA-AHEASVH--LVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIA 111 R++ ++ A A V LVT+RA KALSDTVTP GLVAV DL L + +L+A Sbjct 64 ERYQHVIDRALTAGVRVALVTDRAIKALSDTVTPPGLVAVSDLLDVPLSAAVHQETRLLA 123 Query 112 VTVEIREPGNAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVG 171 V VE+ EPGNAGTVIRIADA+GA A ILAG SVDP+NGK +R+S GS+F +PVV D Sbjct 124 VPVEVNEPGNAGTVIRIADAVGADAAILAGDSVDPHNGKVVRSSAGSLFHLPVVRDRDTV 183 Query 172 AAIADLRAAGLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHI 231 + I +RAAG+Q+LATA DGE+ LD+AD LL++PTAWLFG EAHGL IAA ADHRV I Sbjct 184 SVIEQIRAAGIQILATAADGEVDLDEADELLSKPTAWLFGNEAHGLDPAIAAQADHRVRI 243 Query 232 LMSGGAESLNVAAAAAICLYESARALGR 259 + G AESLN+A AAAICLY SAR R Sbjct 244 PIHGRAESLNLATAAAICLYASARVQNR 271 >gi|62390273|ref|YP_225675.1| 23S ribosomal RNA methyltransferase [Corynebacterium glutamicum ATCC 13032] gi|41325610|emb|CAF21399.1| 23S RIBOSOMAL RNA METHYLTRANSFERASE [Corynebacterium glutamicum ATCC 13032] Length=282 Score = 264 bits (675), Expect = 9e-69, Method: Compositional matrix adjust. Identities = 136/259 (53%), Positives = 177/259 (69%), Gaps = 3/259 (1%) Query 2 LTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELLL 61 TER+ R+ A KLHR R++ RFL EG N V AA+A G ++FVTE AA R E ++ Sbjct 20 FTERTPRIVNAAKLHRAAQRKKDKRFLVEGENSVEAAVATGAATDLFVTESAAERFEEIV 79 Query 62 ---AAHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIRE 118 H +T++AAK LSDTVT G+ A+CD + + G P+L++V VE RE Sbjct 80 RTAGYMNVYTHAITDKAAKHLSDTVTTTGIFALCDDVLWSVGKAITGQPRLVSVPVETRE 139 Query 119 PGNAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLR 178 PGNAGT+IR++DA+GA AV+ AG SVDP K +R+S GS+F IPV ++ + LR Sbjct 140 PGNAGTLIRVSDAVGADAVVFAGESVDPLGAKAVRSSAGSLFHIPVARNNNIADVLGQLR 199 Query 179 AAGLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAE 238 + GLQ+LAT+ DGE+ LDDAD LLA+PTAWLFG EAHGL + A ADHRV I + G AE Sbjct 200 SKGLQILATSADGEVDLDDADELLAKPTAWLFGNEAHGLDESLLAQADHRVRIPIRGRAE 259 Query 239 SLNVAAAAAICLYESARAL 257 SLN+A AA+ICLYES++AL Sbjct 260 SLNLATAASICLYESSKAL 278 >gi|145295523|ref|YP_001138344.1| hypothetical protein cgR_1451 [Corynebacterium glutamicum R] gi|140845443|dbj|BAF54442.1| hypothetical protein [Corynebacterium glutamicum R] gi|344043407|gb|EGV39100.1| 23S ribosomal RNA methyltransferase [Corynebacterium glutamicum S9114] Length=271 Score = 264 bits (674), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 136/259 (53%), Positives = 177/259 (69%), Gaps = 3/259 (1%) Query 2 LTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELLL 61 TER+ R+ A KLHR R++ RFL EG N V AA+A G ++FVTE AA R E ++ Sbjct 9 FTERTPRIVNAAKLHRAAQRKKDKRFLVEGENSVEAAVATGAATDLFVTESAAERFEEIV 68 Query 62 ---AAHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIRE 118 H +T++AAK LSDTVT G+ A+CD + + G P+L++V VE RE Sbjct 69 RTAGYMNVYTHAITDKAAKHLSDTVTTTGIFALCDDVLWSVGKAITGQPRLVSVPVETRE 128 Query 119 PGNAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLR 178 PGNAGT+IR++DA+GA AV+ AG SVDP K +R+S GS+F IPV ++ + LR Sbjct 129 PGNAGTLIRVSDAVGADAVVFAGESVDPLGAKAVRSSAGSLFHIPVARNNNIADVLGQLR 188 Query 179 AAGLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAE 238 + GLQ+LAT+ DGE+ LDDAD LLA+PTAWLFG EAHGL + A ADHRV I + G AE Sbjct 189 SKGLQILATSADGEVDLDDADELLAKPTAWLFGNEAHGLDESLLAQADHRVRIPIRGRAE 248 Query 239 SLNVAAAAAICLYESARAL 257 SLN+A AA+ICLYES++AL Sbjct 249 SLNLATAASICLYESSKAL 267 >gi|111017974|ref|YP_700946.1| tRNA/rRNA methyltransferase [Rhodococcus jostii RHA1] gi|110817504|gb|ABG92788.1| tRNA/rRNA methyltransferase [Rhodococcus jostii RHA1] Length=269 Score = 261 bits (668), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 155/262 (60%), Positives = 186/262 (71%), Gaps = 3/262 (1%) Query 2 LTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRH-ELL 60 LTER+ RV +AVKL R RR+ GRFL EG N V AL V ++F TE A +R+ L+ Sbjct 4 LTERTPRVVSAVKLLRTAERRKVGRFLVEGENSVGEALDTRPVHDLFYTEDAEQRYARLI 63 Query 61 LAAHEASVH--LVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIRE 118 AH A V LVT+RA +ALSDTVTP GLVAVCDL L + + +L+AV V + E Sbjct 64 DRAHTAGVRTSLVTDRAVRALSDTVTPPGLVAVCDLLDVPLAEAIGPGTRLLAVPVAVAE 123 Query 119 PGNAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLR 178 PGNAGTVIR+ADA+GA A ILAG SVDP+NGKC+RAS GS+F +PVV D A + + Sbjct 124 PGNAGTVIRVADAVGADAAILAGDSVDPHNGKCVRASAGSLFHLPVVRERDTAAVLDSIS 183 Query 179 AAGLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAE 238 AAG+Q+LATA DGE+ LDDAD LLA PTAWLFG EAHGL A +A ADHRV I + G AE Sbjct 184 AAGIQLLATAADGEVDLDDADELLARPTAWLFGNEAHGLDAATSARADHRVRIPIHGRAE 243 Query 239 SLNVAAAAAICLYESARALGRR 260 SLN+A AA+ICLY SAR R+ Sbjct 244 SLNLATAASICLYSSARVQNRK 265 >gi|325674243|ref|ZP_08153932.1| SpoU family rRNA methyltransferase [Rhodococcus equi ATCC 33707] gi|325554923|gb|EGD24596.1| SpoU family rRNA methyltransferase [Rhodococcus equi ATCC 33707] Length=266 Score = 261 bits (667), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 155/262 (60%), Positives = 186/262 (71%), Gaps = 3/262 (1%) Query 2 LTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELLL 61 TER+ RV +AVKL R RR+ GRFL EG N VA AL GLV E+F TE AA R+ L+ Sbjct 4 FTERTPRVVSAVKLLRGAERRKTGRFLVEGENAVAEALIAGLVHELFFTEQAAERYPHLI 63 Query 62 ---AAHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIRE 118 A LVT+RA +ALSDTVTP G+VAVCDL L + +L+AV V I E Sbjct 64 ERAVADGVRGSLVTDRAIRALSDTVTPPGVVAVCDLLDVPLATAVTSRTRLLAVPVAIGE 123 Query 119 PGNAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLR 178 PGNAGTVIR+ADA+GA A ILAG SVDP+NGKC+R+S GS+F IP+V +V A + L Sbjct 124 PGNAGTVIRVADAVGADAAILAGDSVDPHNGKCVRSSAGSLFHIPIVRERNVDAVLDALT 183 Query 179 AAGLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAE 238 +AG+Q+LATA DGE+ LD+AD LLA PTAWLFG EAHGL A +A ADHRV I + G AE Sbjct 184 SAGIQILATAADGEVDLDEADDLLARPTAWLFGNEAHGLDAAVARRADHRVRIPIRGRAE 243 Query 239 SLNVAAAAAICLYESARALGRR 260 SLN+A AA+ICLY SAR GR+ Sbjct 244 SLNLATAASICLYASARVQGRQ 265 >gi|226360105|ref|YP_002777883.1| RNA methyltransferase [Rhodococcus opacus B4] gi|226238590|dbj|BAH48938.1| putative RNA methyltransferase [Rhodococcus opacus B4] Length=269 Score = 260 bits (665), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 156/262 (60%), Positives = 186/262 (71%), Gaps = 3/262 (1%) Query 2 LTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELLL 61 LTER+ RV +AVKL R RR+ GRFL EG N V ALA V ++F T A +R+ L+ Sbjct 4 LTERTPRVVSAVKLLRTAERRKVGRFLVEGENSVGEALATHPVHDLFYTADAEQRYSALI 63 Query 62 A-AHEASVH--LVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIRE 118 AH A V LVT+RA +ALSDTVTP GLVAVC+L L + L +L+AV V + E Sbjct 64 ERAHAAGVRTSLVTDRAVRALSDTVTPPGLVAVCELLDVPLAEALGPGTRLLAVPVAVAE 123 Query 119 PGNAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLR 178 PGNAGTVIR+ADA+GA A ILAG SVDP+NGKC+RAS GS+F +PVV D A + + Sbjct 124 PGNAGTVIRVADAVGADAAILAGDSVDPHNGKCVRASAGSLFHLPVVRERDTAAVLDTIS 183 Query 179 AAGLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAE 238 AAG+Q+LATA DGE+ LDDAD LLA PTAWLFG EAHGL A AA ADHRV I + G AE Sbjct 184 AAGIQLLATAADGEVDLDDADELLARPTAWLFGNEAHGLDAATAARADHRVRIPIHGRAE 243 Query 239 SLNVAAAAAICLYESARALGRR 260 SLN+A AA+ICLY SAR R+ Sbjct 244 SLNLATAASICLYSSARVQNRK 265 >gi|54023885|ref|YP_118127.1| putative ribosomal RNA methyltransferase [Nocardia farcinica IFM 10152] gi|54015393|dbj|BAD56763.1| putative ribosomal RNA methyltransferase [Nocardia farcinica IFM 10152] Length=279 Score = 260 bits (664), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 155/261 (60%), Positives = 187/261 (72%), Gaps = 3/261 (1%) Query 2 LTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARR-HELL 60 L+ER+ RV +AVKLHR RRR G FLAEG N V AAL G VRE+F + AA R HEL+ Sbjct 14 LSERNPRVVSAVKLHRAAHRRRTGLFLAEGANAVTAALDTGRVRELFYSAAAAEREHELV 73 Query 61 LAAHEASVH--LVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIRE 118 A V LV++RAA+ L +TVT GLVAVC+ L +VLA P+L+AV VEI E Sbjct 74 ATAAATGVRTTLVSDRAAEHLGETVTAPGLVAVCEQIDVPLPEVLARDPRLLAVPVEIAE 133 Query 119 PGNAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLR 178 PGNAGT+IR+ADA+GA V+LAG +VDP+NGKC+RAS GS+F +PVV +V + L Sbjct 134 PGNAGTLIRVADAVGADGVVLAGHTVDPHNGKCVRASAGSLFHVPVVRGREVVPTLDALH 193 Query 179 AAGLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAE 238 AAGL +LATA DGE+ LD+AD +LA P AWLFG EAHGL +AA ADHRV I + G AE Sbjct 194 AAGLTLLATAADGEVVLDEADEILAGPVAWLFGNEAHGLDPAVAARADHRVRIPIHGRAE 253 Query 239 SLNVAAAAAICLYESARALGR 259 SLN+AAAAAICLY SAR R Sbjct 254 SLNLAAAAAICLYASARVHHR 274 >gi|312139879|ref|YP_004007215.1| tRNA/rRNA methyltransferase [Rhodococcus equi 103S] gi|311889218|emb|CBH48532.1| putative tRNA/rRNA methyltransferase [Rhodococcus equi 103S] Length=266 Score = 259 bits (661), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 154/262 (59%), Positives = 185/262 (71%), Gaps = 3/262 (1%) Query 2 LTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELLL 61 TER+ RV +AVKL R RR+ GRFL EG N VA AL G V E+F TE AA R+ L+ Sbjct 4 FTERTPRVVSAVKLLRGAERRKTGRFLVEGENAVAEALIAGPVHELFFTEQAAERYPHLI 63 Query 62 ---AAHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIRE 118 A LVT+RA +ALSDTVTP G+VAVCDL L + +L+AV V I E Sbjct 64 ERAVADGVRGSLVTDRAIRALSDTVTPPGVVAVCDLLDVPLATAVTSRTRLLAVPVAIGE 123 Query 119 PGNAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLR 178 PGNAGTVIR+ADA+GA A ILAG SVDP+NGKC+R+S GS+F IP+V +V A + L Sbjct 124 PGNAGTVIRVADAVGADAAILAGDSVDPHNGKCVRSSAGSLFHIPIVRERNVDAVLDALT 183 Query 179 AAGLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAE 238 +AG+Q+LATA DGE+ LD+AD LLA PTAWLFG EAHGL A +A ADHRV I + G AE Sbjct 184 SAGIQILATAADGEVDLDEADDLLARPTAWLFGNEAHGLDAAVARRADHRVRIPIRGRAE 243 Query 239 SLNVAAAAAICLYESARALGRR 260 SLN+A AA+ICLY SAR GR+ Sbjct 244 SLNLATAASICLYASARVQGRQ 265 >gi|260577991|ref|ZP_05845915.1| rRNA methylase [Corynebacterium jeikeium ATCC 43734] gi|258603881|gb|EEW17134.1| rRNA methylase [Corynebacterium jeikeium ATCC 43734] Length=285 Score = 253 bits (646), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 135/258 (53%), Positives = 173/258 (68%), Gaps = 3/258 (1%) Query 1 VLTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELL 60 + TER+ R+ A KLHR R++AG FL EG N V AA+A G +V+VT AA R E + Sbjct 13 LFTERTPRIVNAAKLHRSAARKKAGVFLVEGENSVEAAIATGSATDVYVTLAAAERFEPI 72 Query 61 L---AAHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIR 117 + VH +T++AAK LSDT T GL AVC + VL PQL++V VE Sbjct 73 IRTAGYLNIYVHYITDKAAKHLSDTATTTGLFAVCKPVLWSVGKVLTPQPQLVSVPVETN 132 Query 118 EPGNAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADL 177 +PGNAGT+IR+ADAMGA AV+ AG + DP + K RAS GS+F +PV + +V + L Sbjct 133 DPGNAGTLIRVADAMGADAVVFAGETADPQSCKAARASAGSLFHVPVARSTNVKDVLGQL 192 Query 178 RAAGLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGA 237 RA GLQ+LATA DGE++LDDA +L +PTAWLFG EAHGL E+ A AD RV I + G A Sbjct 193 RAQGLQILATAADGEVSLDDAGEILTKPTAWLFGNEAHGLGEELLAEADLRVSIPIRGRA 252 Query 238 ESLNVAAAAAICLYESAR 255 ESLN+A AA+IC+YES+R Sbjct 253 ESLNLATAASICMYESSR 270 >gi|300781270|ref|ZP_07091124.1| TrmH family rRNA methyltransferase [Corynebacterium genitalium ATCC 33030] gi|300532977|gb|EFK54038.1| TrmH family rRNA methyltransferase [Corynebacterium genitalium ATCC 33030] Length=269 Score = 251 bits (641), Expect = 8e-65, Method: Compositional matrix adjust. Identities = 134/260 (52%), Positives = 178/260 (69%), Gaps = 3/260 (1%) Query 2 LTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELLL 61 TER+ RV A KL+R GR++AGRFLAEG N V AA+A G ++FVTE AA R ++ Sbjct 9 FTERTPRVVNAAKLNRAAGRKKAGRFLAEGENSVEAAVATGAATDLFVTEAAADRFYDVV 68 Query 62 ---AAHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIRE 118 A + H +T++AA++L+DTV G+ AVC L VL G P+L+AV V + Sbjct 69 TTAAYMDVFTHAITDKAAQSLTDTVHTTGVFAVCKPVTWTLGSVLTGRPKLVAVCVGTND 128 Query 119 PGNAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLR 178 PGNAGT+IR+ DA+GA AVI AG +VDP + K +R+S GS+F +PV DV AI LR Sbjct 129 PGNAGTIIRLVDALGADAVIFAGDTVDPESPKVVRSSAGSLFHVPVARERDVNGAIGQLR 188 Query 179 AAGLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAE 238 AAGL++ AT + GE++LDD L +PTAWLFG EAHGL ++ A AD+RV I + G AE Sbjct 189 AAGLKLAATTMGGEVSLDDPGNALDQPTAWLFGNEAHGLPDDVLAAADYRVSIPIKGSAE 248 Query 239 SLNVAAAAAICLYESARALG 258 SLN++ AA+ICL+ESA+ LG Sbjct 249 SLNLSTAASICLWESAKMLG 268 >gi|343928312|ref|ZP_08767764.1| putative RNA methyltransferase [Gordonia alkanivorans NBRC 16433] gi|343761782|dbj|GAA14690.1| putative RNA methyltransferase [Gordonia alkanivorans NBRC 16433] Length=269 Score = 250 bits (639), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 146/265 (56%), Positives = 183/265 (70%), Gaps = 6/265 (2%) Query 1 VLTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELL 60 +L+ERS+RV + KLHR RR GRFLAEG N V++ALA V V + RH+ + Sbjct 4 ILSERSSRVVSYAKLHRAAERREQGRFLAEGANSVSSALAVDRAEVVLVADEDQLRHQGI 63 Query 61 LAAHEAS---VHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIR 117 AA EA+ V +++ RAA L++T TP G+ AVC L LE VLA P+L+A+ VE R Sbjct 64 TAAAEAAGVPVLVISARAASKLAETSTPPGIFAVCPLLDVPLEAVLADEPRLLAIAVEPR 123 Query 118 EPGNAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADL 177 EPGNAGT+IR ADAMGA AV+L G +VDP+NGKC+RAS GS+F +PVV + + + Sbjct 124 EPGNAGTLIRCADAMGADAVVLLGDAVDPHNGKCVRASAGSVFTVPVVRQRALTEGLDAI 183 Query 178 RAAGLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGA 237 AG+ +LATA DGE+ LD A +L+ WLFG EAHGLSA+I A ADHRV I + G A Sbjct 184 AGAGISLLATAADGEVNLDHAAEVLSGRVGWLFGNEAHGLSADIQAAADHRVSIPIRGRA 243 Query 238 ESLNVAAAAAICLYESAR---ALGR 259 ESLNVAAAAAICLYESAR A+GR Sbjct 244 ESLNVAAAAAICLYESARVHNAVGR 268 >gi|262202744|ref|YP_003273952.1| tRNA/rRNA methyltransferase SpoU [Gordonia bronchialis DSM 43247] gi|262086091|gb|ACY22059.1| tRNA/rRNA methyltransferase (SpoU) [Gordonia bronchialis DSM 43247] Length=269 Score = 250 bits (639), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 147/262 (57%), Positives = 181/262 (70%), Gaps = 7/262 (2%) Query 1 VLTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELL 60 VL+ERS+RV + KLHR RR GRFL EG N V AAL G + + V + RH L Sbjct 3 VLSERSSRVVSYAKLHRAAARREQGRFLVEGVNAVQAALRSGHAQIMLVPDDDQDRHASL 62 Query 61 LA-AHEASVHLVTER--AAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIR 117 +A A +A V +V R AA L++T TP G+ AVC L L+ VLA +P+L+AV VE R Sbjct 63 IAEARDAGVDVVAIRPQAAVKLAETSTPTGIFAVCGLLDDSLDRVLAAAPRLLAVGVEPR 122 Query 118 EPGNAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADL 177 EPGNAGT+IR ADAMGA AV+L G +VDP+NGKC+R+S GSIF +P+V V A++ + Sbjct 123 EPGNAGTLIRCADAMGADAVVLLGDAVDPHNGKCVRSSAGSIFHLPIVRERSVSDALSAI 182 Query 178 RAAGLQVLATAVDGEMAL----DDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILM 233 AAG+ VLATA DGE+ L DDAD LL PTAWLFG EAHGL ++ A+ADHRV + + Sbjct 183 AAAGVCVLATAADGELILDDISDDADGLLTRPTAWLFGNEAHGLPVDVQAMADHRVAVPI 242 Query 234 SGGAESLNVAAAAAICLYESAR 255 G AESLNVAA AAICLY SAR Sbjct 243 RGRAESLNVAATAAICLYASAR 264 >gi|227488138|ref|ZP_03918454.1| TrmH family rRNA methyltransferase [Corynebacterium glucuronolyticum ATCC 51867] gi|227092000|gb|EEI27312.1| TrmH family rRNA methyltransferase [Corynebacterium glucuronolyticum ATCC 51867] Length=436 Score = 248 bits (634), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 132/258 (52%), Positives = 175/258 (68%), Gaps = 3/258 (1%) Query 1 VLTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELL 60 + TER+ RV A KL R R++ RFL EG N V AA+A G ++F+T+ AA R + Sbjct 103 IFTERTPRVVNAAKLKRSAVRKKEKRFLVEGENSVEAAVATGAATDIFLTKSAAARFTDI 162 Query 61 LAAHEA---SVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIR 117 +AA +A VH + E+AAK+L DTVT G+ AVC DVL G P+L++V VE Sbjct 163 VAAAKAMGMYVHFIDEKAAKSLQDTVTSTGIFAVCREVLWSARDVLNGRPKLVSVPVETN 222 Query 118 EPGNAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADL 177 EPGNAGT+IR+ADAMGA V+ AG +VDP +GK R+S GS+F IPV ++ ++ L Sbjct 223 EPGNAGTLIRVADAMGADCVLFAGDTVDPQSGKAARSSAGSLFHIPVARERNIMKVVSML 282 Query 178 RAAGLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGA 237 R GL + ATA DGE+ L DA+ LL++PTAWLFG EAHGL E+ A AD+RV I + G A Sbjct 283 RERGLAIAATAADGEVDLTDAEDLLSQPTAWLFGNEAHGLPEEVQAQADYRVRIPIRGRA 342 Query 238 ESLNVAAAAAICLYESAR 255 ESLN+A AA+ICL+ES++ Sbjct 343 ESLNLATAASICLFESSK 360 >gi|227541536|ref|ZP_03971585.1| TrmH family rRNA methyltransferase [Corynebacterium glucuronolyticum ATCC 51866] gi|227182692|gb|EEI63664.1| TrmH family rRNA methyltransferase [Corynebacterium glucuronolyticum ATCC 51866] Length=436 Score = 248 bits (633), Expect = 7e-64, Method: Compositional matrix adjust. Identities = 132/258 (52%), Positives = 175/258 (68%), Gaps = 3/258 (1%) Query 1 VLTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELL 60 + TER+ RV A KL R R++ RFL EG N V AA+A G ++F+T+ AA R + Sbjct 103 IFTERTPRVVNAAKLKRSAVRKKEKRFLVEGENSVEAAVATGAATDIFLTKSAAARFTDI 162 Query 61 LAAHEA---SVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIR 117 +AA +A VH + E+AAK+L DTVT G+ AVC DVL G P+L++V VE Sbjct 163 VAAAKAMGMYVHFIDEKAAKSLQDTVTSTGIFAVCREVLWSARDVLNGRPKLVSVPVETN 222 Query 118 EPGNAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADL 177 EPGNAGT+IR+ADAMGA V+ AG +VDP +GK R+S GS+F IPV ++ ++ L Sbjct 223 EPGNAGTLIRVADAMGADCVLFAGDTVDPQSGKAARSSAGSLFHIPVARERNIMKVVSML 282 Query 178 RAAGLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGA 237 R GL + ATA DGE+ L DA+ LL++PTAWLFG EAHGL E+ A AD+RV I + G A Sbjct 283 RERGLAIAATAADGEVDLTDAEDLLSQPTAWLFGNEAHGLPEELQAQADYRVRIPIRGRA 342 Query 238 ESLNVAAAAAICLYESAR 255 ESLN+A AA+ICL+ES++ Sbjct 343 ESLNLATAASICLFESSK 360 >gi|334696740|gb|AEG81537.1| hypothetical protein CULC809_01001 [Corynebacterium ulcerans 809] Length=274 Score = 248 bits (632), Expect = 8e-64, Method: Compositional matrix adjust. Identities = 134/259 (52%), Positives = 176/259 (68%), Gaps = 3/259 (1%) Query 2 LTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRH-ELL 60 +ER+ RV A KL R GR++A RFLAEG N V AA++ G +VFVTE AA+R +++ Sbjct 13 FSERTPRVVNAAKLLRAAGRKKADRFLAEGENSVEAAVSTGAATDVFVTEKAAQRFVDVI 72 Query 61 LAAHE--ASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIRE 118 AA A VH +++RAAK+LSDTVT G+ AVC ++ L G P+L+ V V E Sbjct 73 TAAKHMGAYVHPISDRAAKSLSDTVTTTGIFAVCRPVLWDIKSALKGQPRLVCVAVGTSE 132 Query 119 PGNAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLR 178 PGNAGT+IR+ADAMGA ++ AG +VDP K +R+S GS+F IPVV P++ L+ Sbjct 133 PGNAGTLIRVADAMGADCIVFAGDTVDPQGPKAVRSSAGSLFHIPVVREPNMQRVWDSLK 192 Query 179 AAGLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAE 238 A GL +LAT GE++LD+ L+ PTAWL G EAHGL AE+ ADHRV I + G AE Sbjct 193 ARGLMILATTAQGEVSLDNPGETLSSPTAWLMGNEAHGLDAELMQKADHRVSIPIRGRAE 252 Query 239 SLNVAAAAAICLYESARAL 257 SLN+A AA+ICLYES++AL Sbjct 253 SLNLATAASICLYESSKAL 271 >gi|25028075|ref|NP_738129.1| putative tRNA/rRNA methyltransferase [Corynebacterium efficiens YS-314] gi|23493359|dbj|BAC18329.1| putative tRNA/rRNA methyltransferase [Corynebacterium efficiens YS-314] Length=282 Score = 248 bits (632), Expect = 8e-64, Method: Compositional matrix adjust. Identities = 131/259 (51%), Positives = 175/259 (68%), Gaps = 3/259 (1%) Query 2 LTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELLL 61 TER+ R+ A KL + R++ +FLAEG N V AA+A G ++FVTE AA + E ++ Sbjct 19 FTERTPRIVNAAKLLKTAQRKKTHQFLAEGENSVEAAIATGAATDLFVTEQAAEKFEEIV 78 Query 62 ---AAHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIRE 118 H +T+RAAK+LSDTVT G+ A+C+ + + +L++V VE RE Sbjct 79 RTAGYMNVYTHPITDRAAKSLSDTVTTTGIFALCNDVLWTVGKAVNSRSRLVSVPVETRE 138 Query 119 PGNAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLR 178 PGNAGT+IR+ADA+GA AV+ AG +VDP K +RAS GS+F +PV ++ + LR Sbjct 139 PGNAGTLIRVADAVGADAVVFAGETVDPQGPKVVRASAGSLFHVPVARNVNIDDVLGQLR 198 Query 179 AAGLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAE 238 + GLQ+LATA DGE+ LDDA LL+ PTAWLFG EAHGL E+ A ADHRV I + G AE Sbjct 199 SQGLQILATAADGEVDLDDAGELLSRPTAWLFGNEAHGLGEELLAKADHRVRIPIRGRAE 258 Query 239 SLNVAAAAAICLYESARAL 257 SLN+A AA+ICLYES++AL Sbjct 259 SLNLATAASICLYESSKAL 277 >gi|259505627|ref|ZP_05748529.1| rRNA methylase [Corynebacterium efficiens YS-314] gi|259166792|gb|EEW51346.1| rRNA methylase [Corynebacterium efficiens YS-314] Length=272 Score = 248 bits (632), Expect = 9e-64, Method: Compositional matrix adjust. Identities = 131/259 (51%), Positives = 175/259 (68%), Gaps = 3/259 (1%) Query 2 LTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELLL 61 TER+ R+ A KL + R++ +FLAEG N V AA+A G ++FVTE AA + E ++ Sbjct 9 FTERTPRIVNAAKLLKTAQRKKTHQFLAEGENSVEAAIATGAATDLFVTEQAAEKFEEIV 68 Query 62 ---AAHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIRE 118 H +T+RAAK+LSDTVT G+ A+C+ + + +L++V VE RE Sbjct 69 RTAGYMNVYTHPITDRAAKSLSDTVTTTGIFALCNDVLWTVGKAVNSRSRLVSVPVETRE 128 Query 119 PGNAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLR 178 PGNAGT+IR+ADA+GA AV+ AG +VDP K +RAS GS+F +PV ++ + LR Sbjct 129 PGNAGTLIRVADAVGADAVVFAGETVDPQGPKVVRASAGSLFHVPVARNVNIDDVLGQLR 188 Query 179 AAGLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAE 238 + GLQ+LATA DGE+ LDDA LL+ PTAWLFG EAHGL E+ A ADHRV I + G AE Sbjct 189 SQGLQILATAADGEVDLDDAGELLSRPTAWLFGNEAHGLGEELLAKADHRVRIPIRGRAE 248 Query 239 SLNVAAAAAICLYESARAL 257 SLN+A AA+ICLYES++AL Sbjct 249 SLNLATAASICLYESSKAL 267 >gi|68535913|ref|YP_250618.1| putative rRNA methylase [Corynebacterium jeikeium K411] gi|68263512|emb|CAI37000.1| putative rRNA methylase [Corynebacterium jeikeium K411] Length=285 Score = 248 bits (632), Expect = 9e-64, Method: Compositional matrix adjust. Identities = 132/258 (52%), Positives = 172/258 (67%), Gaps = 3/258 (1%) Query 1 VLTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELL 60 + TER+ R+ A KLHR R++AG FL EG N V AA+A G +V+VT AA R E + Sbjct 13 LFTERTPRIVNAAKLHRAAARKKAGVFLVEGENSVEAAIATGSATDVYVTLAAAERFEPI 72 Query 61 L---AAHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIR 117 + VH +T++AAK LSDT T GL AVC + VL P+L++V VE Sbjct 73 IRTAGYLNIYVHYITDKAAKHLSDTATTTGLFAVCKPVLWSVGKVLTPQPRLVSVPVETN 132 Query 118 EPGNAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADL 177 +PGNAGT+IR+ADAMGA AV+ G + DP + K RAS GS+F +PV + +V + L Sbjct 133 DPGNAGTLIRVADAMGADAVVFVGETADPQSCKAARASAGSLFHVPVARSTNVKDVLGQL 192 Query 178 RAAGLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGA 237 RA G+Q+LATA DGE++LDDA +L +PTAWLFG EAHGL E+ A AD RV I + G A Sbjct 193 RAQGMQILATAADGEVSLDDAGEILTKPTAWLFGNEAHGLGEELLAEADLRVSIPIRGRA 252 Query 238 ESLNVAAAAAICLYESAR 255 ESLN+A AA+IC+YES+R Sbjct 253 ESLNLATAASICMYESSR 270 >gi|337290627|ref|YP_004629648.1| hypothetical protein CULC22_01016 [Corynebacterium ulcerans BR-AD22] gi|334698933|gb|AEG83729.1| hypothetical protein CULC22_01016 [Corynebacterium ulcerans BR-AD22] Length=274 Score = 246 bits (628), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 133/259 (52%), Positives = 175/259 (68%), Gaps = 3/259 (1%) Query 2 LTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRH-ELL 60 +ER+ RV A KL R GR++A RFLAEG N V AA++ G +VFVTE AA+R +++ Sbjct 13 FSERTPRVVNAAKLLRAAGRKKADRFLAEGENSVEAAVSTGAATDVFVTEKAAQRFVDVI 72 Query 61 LAAHEASV--HLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIRE 118 AA V H +++RAAK+LSDTVT G+ AVC ++ L G P+L+ V V E Sbjct 73 TAAKHMGVYVHPISDRAAKSLSDTVTTTGIFAVCRPVLWDIKSALKGQPRLVCVAVGTSE 132 Query 119 PGNAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLR 178 PGNAGT+IR+ADAMGA ++ AG +VDP K +R+S GS+F IPVV P++ L+ Sbjct 133 PGNAGTLIRVADAMGADCIVFAGDTVDPQGPKAVRSSAGSLFHIPVVREPNMQRVWDSLK 192 Query 179 AAGLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAE 238 A GL +LAT GE++LD+ L+ PTAWL G EAHGL AE+ ADHRV I + G AE Sbjct 193 ARGLTILATTAQGEVSLDNPGETLSSPTAWLMGNEAHGLDAELMQKADHRVSIPIRGRAE 252 Query 239 SLNVAAAAAICLYESARAL 257 SLN+A AA+ICLYES++AL Sbjct 253 SLNLATAASICLYESSKAL 271 >gi|38233754|ref|NP_939521.1| putative rRNA methyltransferase [Corynebacterium diphtheriae NCTC 13129] gi|38200015|emb|CAE49684.1| Putative rRNA methyltransferase [Corynebacterium diphtheriae] Length=272 Score = 246 bits (628), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 137/263 (53%), Positives = 175/263 (67%), Gaps = 5/263 (1%) Query 2 LTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELLL 61 TER+ RV A KL R GR++ RFLAEG N V AA+A G ++FVTE AA R E ++ Sbjct 9 FTERTPRVVNAAKLLRSAGRKKVDRFLAEGENSVEAAVATGAATDLFVTEKAAERFEAIV 68 Query 62 AA---HEASVHLVTERAAKALSDTVTPAGLVAVCDLPA-TRLEDVLAGSPQLIAVTVEIR 117 A VH +T+RAAK+LSDT+T G+ AVC LP + L G+P L+ V VE Sbjct 69 TAAGHMGVFVHPITDRAAKSLSDTMTTTGIFAVC-LPVLWSAREALKGNPSLVCVAVETG 127 Query 118 EPGNAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADL 177 EPGNAGT++R+ADAMGA VI AG +VDP + K +RAS GS+F IPVV PD+ L Sbjct 128 EPGNAGTLVRVADAMGADCVIFAGTTVDPQSPKAVRASAGSLFHIPVVREPDMQKVWQIL 187 Query 178 RAAGLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGA 237 RA +Q+LATA GE+ LD A LL +PTAWL G EAHGL+ E + ADH V I + G A Sbjct 188 RARNVQMLATAAQGEINLDTAGELLEKPTAWLMGNEAHGLNDEALSAADHSVRIPIRGRA 247 Query 238 ESLNVAAAAAICLYESARALGRR 260 ESLN+A AA+IC+YES+++ + Sbjct 248 ESLNLATAASICMYESSKSQAHK 270 >gi|300858366|ref|YP_003783349.1| hypothetical protein cpfrc_00948 [Corynebacterium pseudotuberculosis FRC41] gi|300685820|gb|ADK28742.1| hypothetical protein cpfrc_00948 [Corynebacterium pseudotuberculosis FRC41] gi|302330634|gb|ADL20828.1| rRNA methyltransferase [Corynebacterium pseudotuberculosis 1002] gi|308276319|gb|ADO26218.1| putative rRNA methyltransferase [Corynebacterium pseudotuberculosis I19] gi|341824754|gb|AEK92275.1| rRNA methyltransferase [Corynebacterium pseudotuberculosis PAT10] Length=285 Score = 246 bits (627), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 131/259 (51%), Positives = 175/259 (68%), Gaps = 3/259 (1%) Query 2 LTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRH-ELL 60 +ER+ RV A KL R GR++A RFLAEG N V AA++ G +VFVTE AA++ +++ Sbjct 20 FSERTPRVINAAKLLRTAGRKKADRFLAEGENSVEAAVSTGAATDVFVTETAAQKFVDVI 79 Query 61 LAAHEAS--VHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIRE 118 AA VH +T+RAAK+LSDTV G+ AVC ++ L G P+L+ V VE E Sbjct 80 TAAKHMGIYVHPITDRAAKSLSDTVNTTGIFAVCRPVLWDIKSALKGQPRLVCVPVETSE 139 Query 119 PGNAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLR 178 PGNAGT+IR+ADAMGA +I AG +VDP K +R+S GS+F IPVV P++ L+ Sbjct 140 PGNAGTLIRVADAMGADCIIFAGNTVDPQGPKAVRSSAGSLFHIPVVREPNLQRVWDSLK 199 Query 179 AAGLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAE 238 A GL++LAT GE++LD+A +L+ PTAWL G EAHGL + ADHRV I + G AE Sbjct 200 ARGLKILATTAQGEISLDNAGDVLSHPTAWLMGNEAHGLEESLMEKADHRVCIPIRGRAE 259 Query 239 SLNVAAAAAICLYESARAL 257 SLN+A AA++CLYES++ L Sbjct 260 SLNLATAASVCLYESSKTL 278 >gi|302206081|gb|ADL10423.1| rRNA methyltransferase [Corynebacterium pseudotuberculosis C231] Length=289 Score = 246 bits (627), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 131/259 (51%), Positives = 175/259 (68%), Gaps = 3/259 (1%) Query 2 LTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRH-ELL 60 +ER+ RV A KL R GR++A RFLAEG N V AA++ G +VFVTE AA++ +++ Sbjct 24 FSERTPRVINAAKLLRTAGRKKADRFLAEGENSVEAAVSTGAATDVFVTETAAQKFVDVI 83 Query 61 LAAHEAS--VHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIRE 118 AA VH +T+RAAK+LSDTV G+ AVC ++ L G P+L+ V VE E Sbjct 84 TAAKHMGIYVHPITDRAAKSLSDTVNTTGIFAVCRPVLWDIKSALKGQPRLVCVPVETSE 143 Query 119 PGNAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLR 178 PGNAGT+IR+ADAMGA +I AG +VDP K +R+S GS+F IPVV P++ L+ Sbjct 144 PGNAGTLIRVADAMGADCIIFAGNTVDPQGPKAVRSSAGSLFHIPVVREPNLQRVWDSLK 203 Query 179 AAGLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAE 238 A GL++LAT GE++LD+A +L+ PTAWL G EAHGL + ADHRV I + G AE Sbjct 204 ARGLKILATTAQGEISLDNAGDVLSHPTAWLMGNEAHGLEESLMEKADHRVCIPIRGRAE 263 Query 239 SLNVAAAAAICLYESARAL 257 SLN+A AA++CLYES++ L Sbjct 264 SLNLATAASVCLYESSKTL 282 >gi|172040800|ref|YP_001800514.1| putative rRNA methylase [Corynebacterium urealyticum DSM 7109] gi|171852104|emb|CAQ05080.1| putative rRNA methylase [Corynebacterium urealyticum DSM 7109] Length=269 Score = 242 bits (617), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 139/267 (53%), Positives = 172/267 (65%), Gaps = 16/267 (5%) Query 1 VLTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELL 60 + TER+ R+ A KLHR RR+ GRFLAEG N V AALARG V +++VTE A R L Sbjct 3 MFTERTPRIVNAAKLHRAATRRKTGRFLAEGENAVTAALARGEVLDLYVTEAAWERFPFL 62 Query 61 LAAHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLED-------VLAGSPQLIAVT 113 VHL+TERAA LS+TVT GL A+C A ++ D + SP LIAV Sbjct 63 QDVTSTHVHLITERAADHLSETVTHTGLFALC---ANQMVDDDALIASAVKNSP-LIAVP 118 Query 114 VEIREPGNAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAA 173 VE EPGNAGT+IR+ADA GA V+ AG +VDP GK +RAS GS+F +PV V Sbjct 119 VETNEPGNAGTIIRVADAFGAGGVLFAGNTVDPQGGKAVRASAGSLFNLPVARNTSVVEV 178 Query 174 IADLRAAGLQVLATAVDGEMAL----DDADRLLAEPTAWLFGPEAHGLSAEIAALADHRV 229 + L A Q+LATA DG++ L D A+ +LA+PTAWLFG EAHGL + LAD RV Sbjct 179 VEKLHEAEFQILATAADGDVNLHEAADPANGMLAQPTAWLFGNEAHGL-GDWLDLADIRV 237 Query 230 HILMSGGAESLNVAAAAAICLYESARA 256 I M G AESLN+A AA++CLYES++A Sbjct 238 SIPMQGQAESLNLATAASVCLYESSKA 264 >gi|305681831|ref|ZP_07404635.1| RNA methyltransferase, TrmH family [Corynebacterium matruchotii ATCC 14266] gi|305658304|gb|EFM47807.1| RNA methyltransferase, TrmH family [Corynebacterium matruchotii ATCC 14266] Length=266 Score = 241 bits (614), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 130/257 (51%), Positives = 177/257 (69%), Gaps = 3/257 (1%) Query 2 LTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRH-ELL 60 TER+ R+ A KLHR RR+ GRF+ EG N V AA+A G +VF+T AA+R +++ Sbjct 10 FTERTPRIVKAAKLHRTAVRRKEGRFIVEGSNSVEAAVATGSATDVFITAEAAKRFADIV 69 Query 61 LAA--HEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIRE 118 +AA + VH +T AA++L+DT T G+ AVC R+ + L SP+L+ V V + Sbjct 70 VAAGHMQVFVHPITTGAARSLADTATAPGIFAVCRPVLWRVGEALGRSPRLVTVAVGTND 129 Query 119 PGNAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLR 178 PGNAGT++R++DA+GA AVI AG +VDP + K +RAS GS+F +PV + DVG + L+ Sbjct 130 PGNAGTLVRVSDALGADAVIFAGDTVDPQSSKAVRASAGSVFHVPVARSRDVGEVLRLLK 189 Query 179 AAGLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAE 238 GLQ++ATA DGE+ L A+ LLA PTAWLFG EAHGL E+ LADHRV I + G AE Sbjct 190 GRGLQLMATAADGEVDLGTANELLARPTAWLFGNEAHGLGPELMELADHRVAIPIKGSAE 249 Query 239 SLNVAAAAAICLYESAR 255 SLN+A AA+ICL+ES++ Sbjct 250 SLNLATAASICLWESSK 266 >gi|225022603|ref|ZP_03711795.1| hypothetical protein CORMATOL_02645 [Corynebacterium matruchotii ATCC 33806] gi|224944511|gb|EEG25720.1| hypothetical protein CORMATOL_02645 [Corynebacterium matruchotii ATCC 33806] Length=266 Score = 240 bits (613), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 130/257 (51%), Positives = 177/257 (69%), Gaps = 3/257 (1%) Query 2 LTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRH-ELL 60 TER+ R+ A KLHR RR+ GRF+ EG N V AA+A G +VF+T AA+R +++ Sbjct 10 FTERTPRIVKAAKLHRTAVRRKEGRFIVEGSNSVEAAVATGSATDVFITAEAAKRFADIV 69 Query 61 LAA--HEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIRE 118 +AA + VH +T AA++L+DT T G+ AVC R+ + L SP+L+ V V + Sbjct 70 VAAGHMQVFVHPITAGAARSLADTATAPGIFAVCRPVLWRVGEALGRSPRLVTVAVGTND 129 Query 119 PGNAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLR 178 PGNAGT++R++DA+GA AVI AG +VDP + K +RAS GS+F +PV + DVG + L+ Sbjct 130 PGNAGTLVRVSDALGADAVIFAGDTVDPQSSKAVRASAGSVFHVPVARSRDVGEVLRLLK 189 Query 179 AAGLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAE 238 GLQ++ATA DGE+ L A+ LLA PTAWLFG EAHGL E+ LADHRV I + G AE Sbjct 190 GRGLQLMATAADGEVDLGTANELLARPTAWLFGNEAHGLGPELMELADHRVAIPIKGSAE 249 Query 239 SLNVAAAAAICLYESAR 255 SLN+A AA+ICL+ES++ Sbjct 250 SLNLATAASICLWESSK 266 Lambda K H 0.321 0.133 0.372 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 385409777106 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40