BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv1644

Length=260
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15608782|ref|NP_216160.1|  23S rRNA methyltransferase TsnR [My...   498    5e-139
gi|15841100|ref|NP_336137.1|  rRNA methylase, putative [Mycobacte...   494    5e-138
gi|339631700|ref|YP_004723342.1|  23S rRNA methyltransferase [Myc...   491    5e-137
gi|307084225|ref|ZP_07493338.1|  23S rRNA methyltransferase tsnR ...   490    7e-137
gi|289753732|ref|ZP_06513110.1|  23S rRNA methyltransferase tsnR ...   490    9e-137
gi|289745918|ref|ZP_06505296.1|  23S rRNA methyltransferase tsnR ...   461    5e-128
gi|240168029|ref|ZP_04746688.1|  putative 23S rRNA methyltransfer...   401    5e-110
gi|254821223|ref|ZP_05226224.1|  TsnR protein [Mycobacterium intr...   390    1e-106
gi|183982465|ref|YP_001850756.1|  23S rRNA methyltransferase TsnR...   385    3e-105
gi|118617269|ref|YP_905601.1|  23S rRNA methyltransferase TsnR [M...   384    9e-105
gi|118464222|ref|YP_882308.1|  TsnR protein [Mycobacterium avium ...   381    5e-104
gi|296164543|ref|ZP_06847114.1|  RNA methyltransferase [Mycobacte...   380    9e-104
gi|41407453|ref|NP_960289.1|  TsnR [Mycobacterium avium subsp. pa...   374    9e-102
gi|342860770|ref|ZP_08717420.1|  TsnR protein [Mycobacterium colo...   373    2e-101
gi|15827732|ref|NP_301995.1|  rRNA methyltransferase [Mycobacteri...   350    1e-94 
gi|333990463|ref|YP_004523077.1|  23S rRNA methyltransferase TsnR...   342    3e-92 
gi|120404299|ref|YP_954128.1|  tRNA/rRNA methyltransferase SpoU [...   329    3e-88 
gi|126435572|ref|YP_001071263.1|  tRNA/rRNA methyltransferase Spo...   327    7e-88 
gi|118468977|ref|YP_888083.1|  RNA methyltransferase, TrmH family...   324    8e-87 
gi|145224123|ref|YP_001134801.1|  tRNA/rRNA methyltransferase Spo...   318    5e-85 
gi|108799944|ref|YP_640141.1|  tRNA/rRNA methyltransferase SpoU [...   318    6e-85 
gi|315444459|ref|YP_004077338.1|  rRNA methylase [Mycobacterium s...   314    9e-84 
gi|169629410|ref|YP_001703059.1|  tRNA/rRNA methyltransferase [My...   281    9e-74 
gi|296140117|ref|YP_003647360.1|  tRNA/rRNA methyltransferase Spo...   268    8e-70 
gi|229492736|ref|ZP_04386537.1|  tRNA/rRNA methyltransferase [Rho...   267    9e-70 
gi|226306779|ref|YP_002766739.1|  RNA methyltransferase [Rhodococ...   265    4e-69 
gi|62390273|ref|YP_225675.1|  23S ribosomal RNA methyltransferase...   264    9e-69 
gi|145295523|ref|YP_001138344.1|  hypothetical protein cgR_1451 [...   264    1e-68 
gi|111017974|ref|YP_700946.1|  tRNA/rRNA methyltransferase [Rhodo...   261    6e-68 
gi|325674243|ref|ZP_08153932.1|  SpoU family rRNA methyltransfera...   261    7e-68 
gi|226360105|ref|YP_002777883.1|  RNA methyltransferase [Rhodococ...   260    1e-67 
gi|54023885|ref|YP_118127.1|  putative ribosomal RNA methyltransf...   260    2e-67 
gi|312139879|ref|YP_004007215.1|  tRNA/rRNA methyltransferase [Rh...   259    4e-67 
gi|260577991|ref|ZP_05845915.1|  rRNA methylase [Corynebacterium ...   253    2e-65 
gi|300781270|ref|ZP_07091124.1|  TrmH family rRNA methyltransfera...   251    8e-65 
gi|343928312|ref|ZP_08767764.1|  putative RNA methyltransferase [...   250    1e-64 
gi|262202744|ref|YP_003273952.1|  tRNA/rRNA methyltransferase Spo...   250    1e-64 
gi|227488138|ref|ZP_03918454.1|  TrmH family rRNA methyltransfera...   248    5e-64 
gi|227541536|ref|ZP_03971585.1|  TrmH family rRNA methyltransfera...   248    7e-64 
gi|334696740|gb|AEG81537.1|  hypothetical protein CULC809_01001 [...   248    8e-64 
gi|25028075|ref|NP_738129.1|  putative tRNA/rRNA methyltransferas...   248    8e-64 
gi|259505627|ref|ZP_05748529.1|  rRNA methylase [Corynebacterium ...   248    9e-64 
gi|68535913|ref|YP_250618.1|  putative rRNA methylase [Corynebact...   248    9e-64 
gi|337290627|ref|YP_004629648.1|  hypothetical protein CULC22_010...   246    3e-63 
gi|38233754|ref|NP_939521.1|  putative rRNA methyltransferase [Co...   246    3e-63 
gi|300858366|ref|YP_003783349.1|  hypothetical protein cpfrc_0094...   246    3e-63 
gi|302206081|gb|ADL10423.1|  rRNA methyltransferase [Corynebacter...   246    3e-63 
gi|172040800|ref|YP_001800514.1|  putative rRNA methylase [Coryne...   242    5e-62 
gi|305681831|ref|ZP_07404635.1|  RNA methyltransferase, TrmH fami...   241    1e-61 
gi|225022603|ref|ZP_03711795.1|  hypothetical protein CORMATOL_02...   240    1e-61 


>gi|15608782|ref|NP_216160.1| 23S rRNA methyltransferase TsnR [Mycobacterium tuberculosis H37Rv]
 gi|148661440|ref|YP_001282963.1| putative 23S rRNA methyltransferase TsnR [Mycobacterium tuberculosis 
H37Ra]
 gi|167968402|ref|ZP_02550679.1| putative 23S rRNA methyltransferase TsnR [Mycobacterium tuberculosis 
H37Ra]
 8 more sequence titles
 Length=260

 Score =  498 bits (1281),  Expect = 5e-139, Method: Compositional matrix adjust.
 Identities = 259/260 (99%), Positives = 260/260 (100%), Gaps = 0/260 (0%)

Query  1    VLTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELL  60
            +LTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELL
Sbjct  1    MLTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELL  60

Query  61   LAAHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIREPG  120
            LAAHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIREPG
Sbjct  61   LAAHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIREPG  120

Query  121  NAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLRAA  180
            NAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLRAA
Sbjct  121  NAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLRAA  180

Query  181  GLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAESL  240
            GLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAESL
Sbjct  181  GLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAESL  240

Query  241  NVAAAAAICLYESARALGRR  260
            NVAAAAAICLYESARALGRR
Sbjct  241  NVAAAAAICLYESARALGRR  260


>gi|15841100|ref|NP_336137.1| rRNA methylase, putative [Mycobacterium tuberculosis CDC1551]
 gi|31792831|ref|NP_855324.1| 23S rRNA methyltransferase TsnR [Mycobacterium bovis AF2122/97]
 gi|121637552|ref|YP_977775.1| putative 23S rRNA methyltransferase tsnR [Mycobacterium bovis 
BCG str. Pasteur 1173P2]
 58 more sequence titles
 Length=260

 Score =  494 bits (1272),  Expect = 5e-138, Method: Compositional matrix adjust.
 Identities = 258/260 (99%), Positives = 259/260 (99%), Gaps = 0/260 (0%)

Query  1    VLTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELL  60
            +LTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELL
Sbjct  1    MLTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELL  60

Query  61   LAAHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIREPG  120
            LAAHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIREPG
Sbjct  61   LAAHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIREPG  120

Query  121  NAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLRAA  180
            NAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLRAA
Sbjct  121  NAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLRAA  180

Query  181  GLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAESL  240
            GLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHI MSGGAESL
Sbjct  181  GLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHIPMSGGAESL  240

Query  241  NVAAAAAICLYESARALGRR  260
            NVAAAAAICLYESARALGRR
Sbjct  241  NVAAAAAICLYESARALGRR  260


>gi|339631700|ref|YP_004723342.1| 23S rRNA methyltransferase [Mycobacterium africanum GM041182]
 gi|339331056|emb|CCC26728.1| putative 23S rRNA methyltransferase tsnR [Mycobacterium africanum 
GM041182]
Length=260

 Score =  491 bits (1264),  Expect = 5e-137, Method: Compositional matrix adjust.
 Identities = 257/260 (99%), Positives = 258/260 (99%), Gaps = 0/260 (0%)

Query  1    VLTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELL  60
            +LTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELL
Sbjct  1    MLTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELL  60

Query  61   LAAHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIREPG  120
            LAAHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIREPG
Sbjct  61   LAAHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIREPG  120

Query  121  NAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLRAA  180
            NAGTVIRIADAMGAAAVILA RSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLRAA
Sbjct  121  NAGTVIRIADAMGAAAVILARRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLRAA  180

Query  181  GLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAESL  240
            GLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHI MSGGAESL
Sbjct  181  GLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHIPMSGGAESL  240

Query  241  NVAAAAAICLYESARALGRR  260
            NVAAAAAICLYESARALGRR
Sbjct  241  NVAAAAAICLYESARALGRR  260


>gi|307084225|ref|ZP_07493338.1| 23S rRNA methyltransferase tsnR [Mycobacterium tuberculosis SUMu012]
 gi|308366170|gb|EFP55021.1| 23S rRNA methyltransferase tsnR [Mycobacterium tuberculosis SUMu012]
Length=256

 Score =  490 bits (1262),  Expect = 7e-137, Method: Compositional matrix adjust.
 Identities = 255/256 (99%), Positives = 256/256 (100%), Gaps = 0/256 (0%)

Query  1    VLTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELL  60
            +LTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELL
Sbjct  1    MLTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELL  60

Query  61   LAAHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIREPG  120
            LAAHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIREPG
Sbjct  61   LAAHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIREPG  120

Query  121  NAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLRAA  180
            NAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLRAA
Sbjct  121  NAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLRAA  180

Query  181  GLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAESL  240
            GLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAESL
Sbjct  181  GLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAESL  240

Query  241  NVAAAAAICLYESARA  256
            NVAAAAAICLYESARA
Sbjct  241  NVAAAAAICLYESARA  256


>gi|289753732|ref|ZP_06513110.1| 23S rRNA methyltransferase tsnR [Mycobacterium tuberculosis EAS054]
 gi|289694319|gb|EFD61748.1| 23S rRNA methyltransferase tsnR [Mycobacterium tuberculosis EAS054]
Length=260

 Score =  490 bits (1261),  Expect = 9e-137, Method: Compositional matrix adjust.
 Identities = 257/260 (99%), Positives = 258/260 (99%), Gaps = 0/260 (0%)

Query  1    VLTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELL  60
            +LTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELL
Sbjct  1    MLTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELL  60

Query  61   LAAHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIREPG  120
            LAAHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIREPG
Sbjct  61   LAAHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIREPG  120

Query  121  NAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLRAA  180
            NAGTVIRIADAMGAAAVILAGRSVDP NGKCLRASTGSIFAIPVVVAPDVGAAIADLRAA
Sbjct  121  NAGTVIRIADAMGAAAVILAGRSVDPCNGKCLRASTGSIFAIPVVVAPDVGAAIADLRAA  180

Query  181  GLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAESL  240
            GLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHI MSGGAESL
Sbjct  181  GLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHIPMSGGAESL  240

Query  241  NVAAAAAICLYESARALGRR  260
            NVAAAAAICLYESARALGRR
Sbjct  241  NVAAAAAICLYESARALGRR  260


>gi|289745918|ref|ZP_06505296.1| 23S rRNA methyltransferase tsnR [Mycobacterium tuberculosis 02_1987]
 gi|289686446|gb|EFD53934.1| 23S rRNA methyltransferase tsnR [Mycobacterium tuberculosis 02_1987]
Length=259

 Score =  461 bits (1186),  Expect = 5e-128, Method: Compositional matrix adjust.
 Identities = 248/261 (96%), Positives = 250/261 (96%), Gaps = 3/261 (1%)

Query  1    VLTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELL  60
            +LTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELL
Sbjct  1    MLTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELL  60

Query  61   LAAHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIREPG  120
            LAAHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIREPG
Sbjct  61   LAAHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIREPG  120

Query  121  NAGTVIRIADAMGAAAVILAGRSVD-PYNGKCLRASTGSIFAIPVVVAPDVGAAIADLRA  179
            NAGTVIRIADAMGAA  +   R  D P  GKCLRASTGSIFAIPVVVAPDVGAAIADLRA
Sbjct  121  NAGTVIRIADAMGAA--VADHRVGDHPLGGKCLRASTGSIFAIPVVVAPDVGAAIADLRA  178

Query  180  AGLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAES  239
            AGLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHI MSGGAES
Sbjct  179  AGLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHIPMSGGAES  238

Query  240  LNVAAAAAICLYESARALGRR  260
            LNVAAAAAICLYESARALGRR
Sbjct  239  LNVAAAAAICLYESARALGRR  259


>gi|240168029|ref|ZP_04746688.1| putative 23S rRNA methyltransferase [Mycobacterium kansasii ATCC 
12478]
Length=261

 Score =  401 bits (1030),  Expect = 5e-110, Method: Compositional matrix adjust.
 Identities = 211/257 (83%), Positives = 222/257 (87%), Gaps = 0/257 (0%)

Query  1    VLTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELL  60
            +LTERSARVA AVKLHRHVGRRRA RFLAEGPNLV AA ARGLVREVFVTEVAA+RHE  
Sbjct  1    MLTERSARVAAAVKLHRHVGRRRANRFLAEGPNLVEAASARGLVREVFVTEVAAQRHETW  60

Query  61   LAAHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIREPG  120
            LA H+A VHLVTERAAKALSDTVTPAGLVAVCD+P TRL+DVL  SP+LIA  VEI EPG
Sbjct  61   LAGHDAPVHLVTERAAKALSDTVTPAGLVAVCDIPTTRLDDVLTRSPRLIATAVEISEPG  120

Query  121  NAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLRAA  180
            NAGT+IRIADAMGAAAVILAG SVDPYNGKCLRAS GSIF IPVV   D  AAI  LR A
Sbjct  121  NAGTLIRIADAMGAAAVILAGHSVDPYNGKCLRASAGSIFNIPVVAVADTHAAIVSLRGA  180

Query  181  GLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAESL  240
            GLQVLATAVDGE +LDDAD LL   TAWLFGPE+HGLSAEIA  ADHRV I MSG AESL
Sbjct  181  GLQVLATAVDGETSLDDADPLLGVATAWLFGPESHGLSAEIAGAADHRVRIPMSGRAESL  240

Query  241  NVAAAAAICLYESARAL  257
            N+AAAAAICLY+SARAL
Sbjct  241  NIAAAAAICLYQSARAL  257


>gi|254821223|ref|ZP_05226224.1| TsnR protein [Mycobacterium intracellulare ATCC 13950]
Length=268

 Score =  390 bits (1002),  Expect = 1e-106, Method: Compositional matrix adjust.
 Identities = 203/257 (79%), Positives = 222/257 (87%), Gaps = 0/257 (0%)

Query  1    VLTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELL  60
            VLTERSARVA AVKLHRHVGRRRAGRFLAEGPNLV AA  RGLVR+VFVTEVA +RH  L
Sbjct  6    VLTERSARVAAAVKLHRHVGRRRAGRFLAEGPNLVEAASRRGLVRDVFVTEVAEQRHASL  65

Query  61   LAAHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIREPG  120
            LA  +  VH VTERAAKALSDTVTPAGLVAVCD+PAT L+DVLAG+PQL+AV VEI EPG
Sbjct  66   LAGLDCPVHPVTERAAKALSDTVTPAGLVAVCDMPATHLDDVLAGAPQLLAVAVEIGEPG  125

Query  121  NAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLRAA  180
            NAGT+IR+ADAMGAA VIL GRSVDPYNGKCLRAS GSIF +PVVVAPD  AA+  +RAA
Sbjct  126  NAGTLIRLADAMGAAGVILGGRSVDPYNGKCLRASAGSIFCVPVVVAPDALAAVDAVRAA  185

Query  181  GLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAESL  240
            GLQ LAT VDGE  LD+A  LL  PTAWLFGPE+HGL +EIA+ ADHR+ I MSGGAESL
Sbjct  186  GLQALATTVDGERRLDEAGELLGRPTAWLFGPESHGLPSEIASAADHRLRIPMSGGAESL  245

Query  241  NVAAAAAICLYESARAL  257
            NVA+AAAICLY+SARAL
Sbjct  246  NVASAAAICLYQSARAL  262


>gi|183982465|ref|YP_001850756.1| 23S rRNA methyltransferase TsnR [Mycobacterium marinum M]
 gi|183175791|gb|ACC40901.1| 23S rRNA methyltransferase TsnR [Mycobacterium marinum M]
Length=275

 Score =  385 bits (989),  Expect = 3e-105, Method: Compositional matrix adjust.
 Identities = 195/257 (76%), Positives = 222/257 (87%), Gaps = 0/257 (0%)

Query  1    VLTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELL  60
            +LTERSARV+ A KL RHVGRRR  RFLAEGPNLV AA ARGL+RE++VTE A +RHE L
Sbjct  15   ILTERSARVSAAAKLQRHVGRRRTSRFLAEGPNLVEAAAARGLIRELYVTEAAEQRHEPL  74

Query  61   LAAHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIREPG  120
            LA  +A V++VTERAAKALSDTVTP+GLVAVC++P T L +VL+G+P+L+AV VEI EPG
Sbjct  75   LARQDAPVYVVTERAAKALSDTVTPSGLVAVCEMPTTGLAEVLSGAPRLVAVAVEIGEPG  134

Query  121  NAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLRAA  180
            NAGT+IRIADAMGA AV+LAG SVDPYNGKCLRAS GSIFAIPV+VAPD  AA+  LR A
Sbjct  135  NAGTLIRIADAMGANAVVLAGNSVDPYNGKCLRASAGSIFAIPVIVAPDTSAALGALRGA  194

Query  181  GLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAESL  240
            GLQVLA+ +DGE +LDD D+LL  PTAWLFGPEAHGLSAE+AA A HRV I MSGGAESL
Sbjct  195  GLQVLASVLDGEKSLDDIDQLLEAPTAWLFGPEAHGLSAEVAAAAHHRVRIPMSGGAESL  254

Query  241  NVAAAAAICLYESARAL  257
            NVAAAAAICLY+SARAL
Sbjct  255  NVAAAAAICLYQSARAL  271


>gi|118617269|ref|YP_905601.1| 23S rRNA methyltransferase TsnR [Mycobacterium ulcerans Agy99]
 gi|118569379|gb|ABL04130.1| 23S rRNA methyltransferase TsnR [Mycobacterium ulcerans Agy99]
Length=275

 Score =  384 bits (985),  Expect = 9e-105, Method: Compositional matrix adjust.
 Identities = 194/257 (76%), Positives = 221/257 (86%), Gaps = 0/257 (0%)

Query  1    VLTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELL  60
            +LTERSARV+ A KL RHVGRRR  RFLAEGPNLV AA ARGL+RE++VTE A +RHE L
Sbjct  15   ILTERSARVSAAAKLQRHVGRRRTSRFLAEGPNLVEAAAARGLIRELYVTEAAEQRHEPL  74

Query  61   LAAHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIREPG  120
            LA  +A V++VTERAAKALSDTVTP+GLVAVC++P T L +VL+G+P+L+AV VEI EPG
Sbjct  75   LARQDAPVYVVTERAAKALSDTVTPSGLVAVCEMPTTGLAEVLSGAPRLVAVAVEIGEPG  134

Query  121  NAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLRAA  180
            NAGT+IRIADAMGA AV+LAG SVDPYNGKCLRAS GSIFAIPV+VAPD  AA+  LR A
Sbjct  135  NAGTLIRIADAMGANAVVLAGNSVDPYNGKCLRASAGSIFAIPVIVAPDTSAALGALRGA  194

Query  181  GLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAESL  240
            GLQ LA+ +DGE +LDD D+LL  PTAWLFGPEAHGLSAE+AA A HRV I MSGGAESL
Sbjct  195  GLQALASVLDGEKSLDDIDQLLEAPTAWLFGPEAHGLSAEVAAAAHHRVRIPMSGGAESL  254

Query  241  NVAAAAAICLYESARAL  257
            NVAAAAAICLY+SARAL
Sbjct  255  NVAAAAAICLYQSARAL  271


>gi|118464222|ref|YP_882308.1| TsnR protein [Mycobacterium avium 104]
 gi|254775574|ref|ZP_05217090.1| TsnR protein [Mycobacterium avium subsp. avium ATCC 25291]
 gi|118165509|gb|ABK66406.1| TsnR protein [Mycobacterium avium 104]
Length=263

 Score =  381 bits (979),  Expect = 5e-104, Method: Compositional matrix adjust.
 Identities = 196/257 (77%), Positives = 222/257 (87%), Gaps = 0/257 (0%)

Query  1    VLTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELL  60
            +LTERS RVA A KLHRHVGRRRA RFLAEGPNLV AA  RGLVR+VFVTE A +R+  L
Sbjct  1    MLTERSGRVAAAAKLHRHVGRRRAARFLAEGPNLVEAAAGRGLVRDVFVTEAAQQRYAPL  60

Query  61   LAAHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIREPG  120
            LAA +  VHL+TERAAKALSDTVTPAGLVAVCDLPAT L DVLAGSP+LIAV V+I EPG
Sbjct  61   LAALDCPVHLITERAAKALSDTVTPAGLVAVCDLPATGLRDVLAGSPRLIAVAVQISEPG  120

Query  121  NAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLRAA  180
            NAGT+IR++DAMGAA V+LAG SVDPYNGKCLRAS GSIF++PVV APD+  A+A +R A
Sbjct  121  NAGTLIRLSDAMGAAGVLLAGHSVDPYNGKCLRASAGSIFSVPVVAAPDLREAVAAVREA  180

Query  181  GLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAESL  240
            GLQ+LAT VDGE+ LD A  LLA+PTAWLFGPE+HGL +E+AA ADHRV I M+GGAESL
Sbjct  181  GLQLLATTVDGEVRLDRAGELLAKPTAWLFGPESHGLPSEVAAAADHRVRIPMAGGAESL  240

Query  241  NVAAAAAICLYESARAL  257
            NVA+AAAICLY+SARAL
Sbjct  241  NVASAAAICLYQSARAL  257


>gi|296164543|ref|ZP_06847114.1| RNA methyltransferase [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295900143|gb|EFG79578.1| RNA methyltransferase [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=265

 Score =  380 bits (977),  Expect = 9e-104, Method: Compositional matrix adjust.
 Identities = 199/258 (78%), Positives = 218/258 (85%), Gaps = 0/258 (0%)

Query  1    VLTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELL  60
            VLTERSARVA AVKLHRHVGRRRAGRFLAEG NLV AA ARGLVR+VFVTE A RR+  L
Sbjct  3    VLTERSARVAAAVKLHRHVGRRRAGRFLAEGANLVEAAAARGLVRDVFVTEAAERRYAAL  62

Query  61   LAAHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIREPG  120
            L A    VHLV+ERAAKALSDTVTPAGLVAVCD+PAT+L DVLAGSP+LIAV VEI EPG
Sbjct  63   LGAQRCPVHLVSERAAKALSDTVTPAGLVAVCDMPATQLADVLAGSPRLIAVAVEIGEPG  122

Query  121  NAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLRAA  180
            NAGTVIR+A AMGA  VIL G SVDPYNGKCLRASTGSIF+IPVV  PDV AA+  LR A
Sbjct  123  NAGTVIRLAAAMGAHGVILGGHSVDPYNGKCLRASTGSIFSIPVVTEPDVPAALDALRGA  182

Query  181  GLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAESL  240
            GLQVLAT VDGE  LD++  LL  PTAWLFGPE+ GL +++A  ADHR+ I MSGGAESL
Sbjct  183  GLQVLATTVDGEKRLDESADLLGRPTAWLFGPESRGLPSDVAGAADHRMRIPMSGGAESL  242

Query  241  NVAAAAAICLYESARALG  258
            NVA+AAAICLY+SA+ALG
Sbjct  243  NVASAAAICLYQSAQALG  260


>gi|41407453|ref|NP_960289.1| TsnR [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|41395805|gb|AAS03672.1| TsnR [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|336457807|gb|EGO36801.1| rRNA methylase [Mycobacterium avium subsp. paratuberculosis S397]
Length=263

 Score =  374 bits (959),  Expect = 9e-102, Method: Compositional matrix adjust.
 Identities = 195/257 (76%), Positives = 219/257 (86%), Gaps = 0/257 (0%)

Query  1    VLTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELL  60
            +LTERS RVA A KLHRHVGRRRA RFLAEG NLV AA  RGLVR+VFVTE A +R+  L
Sbjct  1    MLTERSGRVAAAAKLHRHVGRRRAARFLAEGSNLVEAAAGRGLVRDVFVTEAAQQRYAPL  60

Query  61   LAAHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIREPG  120
            LAA +  VHLVTERAAKALSDTVTPAGLVAVCDLPAT L DVLAGSP+LIAV V+I EPG
Sbjct  61   LAALDCPVHLVTERAAKALSDTVTPAGLVAVCDLPATGLRDVLAGSPRLIAVAVQISEPG  120

Query  121  NAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLRAA  180
            NAGT+IR+ADAMGAA V+LAG SVDPYNGKCLRAS GSIF++PV  APD+  A+A +R A
Sbjct  121  NAGTLIRLADAMGAAGVLLAGHSVDPYNGKCLRASAGSIFSVPVAAAPDLREAVAAVREA  180

Query  181  GLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAESL  240
            GLQ+LAT VDGE+ LD A  LLA+PTAWLFGPE+HGL + +AA ADHRV I M+GGAESL
Sbjct  181  GLQLLATTVDGEVRLDRAGELLAKPTAWLFGPESHGLPSAVAAAADHRVCIPMAGGAESL  240

Query  241  NVAAAAAICLYESARAL  257
            NVA+AAAICLY+SARAL
Sbjct  241  NVASAAAICLYQSARAL  257


>gi|342860770|ref|ZP_08717420.1| TsnR protein [Mycobacterium colombiense CECT 3035]
 gi|342131794|gb|EGT85051.1| TsnR protein [Mycobacterium colombiense CECT 3035]
Length=271

 Score =  373 bits (957),  Expect = 2e-101, Method: Compositional matrix adjust.
 Identities = 195/260 (75%), Positives = 217/260 (84%), Gaps = 3/260 (1%)

Query  1    VLTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELL  60
            VLTERSARVA AVKLHRHVGRRR GRFLAEGPNLV AA +RGLVR+VFVTEVA +RH  L
Sbjct  6    VLTERSARVAAAVKLHRHVGRRRTGRFLAEGPNLVEAAASRGLVRDVFVTEVAQQRHASL  65

Query  61   LAAHEAS---VHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIR  117
            LA   ++   VH VT+RAAKALSDTVTPAGLVAVC+ P T L DVLAG P L+AV VEI 
Sbjct  66   LATLTSAGCPVHPVTDRAAKALSDTVTPAGLVAVCETPQTHLHDVLAGPPALVAVAVEIS  125

Query  118  EPGNAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADL  177
            EPGNAGT+IR+ADAMGAA VIL G SVDPYNGKCLRAS GSIF++PVV APD  AA+  L
Sbjct  126  EPGNAGTLIRLADAMGAAGVILGGHSVDPYNGKCLRASAGSIFSVPVVAAPDTLAAVGAL  185

Query  178  RAAGLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGA  237
            RAAGLQ+LAT VDGE  LD+A  LL  PTAWLFGPE+HGL  ++AA ADHR+ I M+GGA
Sbjct  186  RAAGLQLLATTVDGETRLDEATDLLGVPTAWLFGPESHGLPTDVAAAADHRMRIPMAGGA  245

Query  238  ESLNVAAAAAICLYESARAL  257
            ESLNVA+AAAICLY+SARAL
Sbjct  246  ESLNVASAAAICLYQSARAL  265


>gi|15827732|ref|NP_301995.1| rRNA methyltransferase [Mycobacterium leprae TN]
 gi|221230209|ref|YP_002503625.1| putative rRNA methyltransferase [Mycobacterium leprae Br4923]
 gi|13093283|emb|CAC31778.1| putative rRNA methyltransferase [Mycobacterium leprae]
 gi|219933316|emb|CAR71492.1| putative rRNA methyltransferase [Mycobacterium leprae Br4923]
Length=259

 Score =  350 bits (897),  Expect = 1e-94, Method: Compositional matrix adjust.
 Identities = 187/257 (73%), Positives = 209/257 (82%), Gaps = 0/257 (0%)

Query  1    VLTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELL  60
            +LTERSARV  AVKLHR V RRR  RFLAEGPNLV AA+  GLVR+VFVTEVAA+RH  +
Sbjct  1    MLTERSARVVAAVKLHRQVARRRVRRFLAEGPNLVEAAIVSGLVRDVFVTEVAAQRHATV  60

Query  61   LAAHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIREPG  120
            LA  +  VH V+ERAAKALSDTVTP GL+AVC++P TRL  VLAGSPQL+   VEI EPG
Sbjct  61   LATLKCPVHPVSERAAKALSDTVTPTGLIAVCEMPTTRLATVLAGSPQLVVAAVEISEPG  120

Query  121  NAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLRAA  180
            NAGTVIRIADAMGAAAVI  G +VDPYNGKCLR+S GSIF+I VVVA D  AA+ +LRAA
Sbjct  121  NAGTVIRIADAMGAAAVIFGGYTVDPYNGKCLRSSAGSIFSITVVVASDAYAAVTELRAA  180

Query  181  GLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAESL  240
            GLQVLAT VDGE +LD+A  LL +PTAWLFG E HGLS EIA  AD+RV I M GG ESL
Sbjct  181  GLQVLATMVDGETSLDEAKPLLGKPTAWLFGSEPHGLSTEIAEAADYRVRIPMVGGVESL  240

Query  241  NVAAAAAICLYESARAL  257
            NVAA AAICLY+S+RAL
Sbjct  241  NVAATAAICLYQSSRAL  257


>gi|333990463|ref|YP_004523077.1| 23S rRNA methyltransferase TsnR [Mycobacterium sp. JDM601]
 gi|333486432|gb|AEF35824.1| 23S rRNA methyltransferase TsnR [Mycobacterium sp. JDM601]
Length=262

 Score =  342 bits (878),  Expect = 3e-92, Method: Compositional matrix adjust.
 Identities = 182/256 (72%), Positives = 209/256 (82%), Gaps = 0/256 (0%)

Query  1    VLTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELL  60
            +LTERSARV  AVKLHRHV R+R  RFLAEGPNLV AA+ RGL  EVF TE AA+RH  L
Sbjct  1    MLTERSARVVAAVKLHRHVARKREQRFLAEGPNLVEAAIRRGLAVEVFATESAAQRHGEL  60

Query  61   LAAHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIREPG  120
            LA+  A VH V++RAAKALSDTVTPAGLVAVC +P   L  +LA +P L+AV V I EPG
Sbjct  61   LASVRAPVHQVSDRAAKALSDTVTPAGLVAVCTVPEPDLGGLLADAPHLVAVAVGIGEPG  120

Query  121  NAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLRAA  180
            NAGT+IRIADA GA+ V+L G SVDPYNGKCLRAS GS+F +PVVVA D  A +A LR +
Sbjct  121  NAGTLIRIADATGASLVVLTGNSVDPYNGKCLRASAGSVFNVPVVVAADTDAVLAALRES  180

Query  181  GLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAESL  240
            GLQ+LATA+DG+++LDDAD +L  PTAWLFGPE+HGL A +AA ADHRVHI MSGGAESL
Sbjct  181  GLQLLATALDGDLSLDDADPVLTAPTAWLFGPESHGLPAAVAAAADHRVHIPMSGGAESL  240

Query  241  NVAAAAAICLYESARA  256
            NVAAAAAICLY+SARA
Sbjct  241  NVAAAAAICLYQSARA  256


>gi|120404299|ref|YP_954128.1| tRNA/rRNA methyltransferase SpoU [Mycobacterium vanbaalenii PYR-1]
 gi|119957117|gb|ABM14122.1| tRNA/rRNA methyltransferase (SpoU) [Mycobacterium vanbaalenii 
PYR-1]
Length=248

 Score =  329 bits (843),  Expect = 3e-88, Method: Compositional matrix adjust.
 Identities = 175/248 (71%), Positives = 201/248 (82%), Gaps = 4/248 (1%)

Query  9    VATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELLLAAHEASV  68
            +A AVKLHRH GRRRA RFLAEGPNLV AAL RGLV EVF TE AA +   LL A  ASV
Sbjct  1    MAAAVKLHRHTGRRRAARFLAEGPNLVEAALRRGLVHEVFATEGAAAKFAALLGA--ASV  58

Query  69   HLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIREPGNAGTVIRI  128
            HLVT++AAKALSDTVTP GLVAVC +P   L+ VLAG+P+L+AV V I EPGNAGT+IR+
Sbjct  59   HLVTDKAAKALSDTVTPVGLVAVCSIPEADLDQVLAGNPKLVAVPVGISEPGNAGTLIRV  118

Query  129  ADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLRAAGLQVLATA  188
            ADAMGA AV+LAG SVDPYNGKCLRAS GSIF+IPV+ APD  AA+  L+ AGLQVLAT 
Sbjct  119  ADAMGADAVVLAGDSVDPYNGKCLRASAGSIFSIPVLSAPDAVAAVTKLKDAGLQVLATV  178

Query  189  VDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAESLNVAAAAAI  248
            +DG ++L+DAD  L+ PTAWLFGPEAHGL A++A LA   V I M G AESLNVA+AAAI
Sbjct  179  LDGPVSLEDAD--LSVPTAWLFGPEAHGLPADVAGLATAGVRIPMPGNAESLNVASAAAI  236

Query  249  CLYESARA  256
            CLY+SAR+
Sbjct  237  CLYQSARS  244


>gi|126435572|ref|YP_001071263.1| tRNA/rRNA methyltransferase SpoU [Mycobacterium sp. JLS]
 gi|126235372|gb|ABN98772.1| tRNA/rRNA methyltransferase (SpoU) [Mycobacterium sp. JLS]
Length=248

 Score =  327 bits (839),  Expect = 7e-88, Method: Compositional matrix adjust.
 Identities = 177/246 (72%), Positives = 197/246 (81%), Gaps = 4/246 (1%)

Query  12   AVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELLLAAHEASVHLV  71
            AVKLHRHVGRRRA RFLAEGPNLV AAL RG+V EVF TE AA R   LL    A VHLV
Sbjct  4    AVKLHRHVGRRRAARFLAEGPNLVEAALRRGVVSEVFATEDAAARFAALLVG--ADVHLV  61

Query  72   TERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIREPGNAGTVIRIADA  131
            TERAAKALSDTVTP GLVAVC +P   L+++L  SP+L+AV VE  EPGNAGT+IR+ADA
Sbjct  62   TERAAKALSDTVTPVGLVAVCRMPEVSLDEILGASPRLVAVAVETSEPGNAGTLIRLADA  121

Query  132  MGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLRAAGLQVLATAVDG  191
            MGA AVILAG SVDPYNGKCLRAS GSIF + VV APD    +A L  AGL VLAT +DG
Sbjct  122  MGADAVILAGNSVDPYNGKCLRASAGSIFGVSVVEAPDTAGLVAALHGAGLTVLATTLDG  181

Query  192  EMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAESLNVAAAAAICLY  251
            E++LDDA+  L+ PTAWLFG EAHGL+ E+AALAD RV I M+G AESLNVAAAAAICLY
Sbjct  182  EVSLDDAE--LSGPTAWLFGAEAHGLAPEVAALADARVTIPMAGSAESLNVAAAAAICLY  239

Query  252  ESARAL  257
            +SARAL
Sbjct  240  QSARAL  245


>gi|118468977|ref|YP_888083.1| RNA methyltransferase, TrmH family protein [Mycobacterium smegmatis 
str. MC2 155]
 gi|118170264|gb|ABK71160.1| RNA methyltransferase, TrmH family protein [Mycobacterium smegmatis 
str. MC2 155]
Length=252

 Score =  324 bits (831),  Expect = 8e-87, Method: Compositional matrix adjust.
 Identities = 177/251 (71%), Positives = 195/251 (78%), Gaps = 4/251 (1%)

Query  12   AVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELLLAAHEASVHLV  71
            AVKLHRHVGRRRA RFLAEGPNLV AAL RGLV EVF TE A  R   LLA  +A V  V
Sbjct  4    AVKLHRHVGRRRAARFLAEGPNLVEAALRRGLVSEVFATEAALDRFGALLA--DAPVTPV  61

Query  72   TERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIREPGNAGTVIRIADA  131
            TERAAKALSDTVTP GLVAVC LP   L+DVLAG   LIAV V++ EPGNAGT+IR+ADA
Sbjct  62   TERAAKALSDTVTPVGLVAVCRLPEVSLDDVLAGPAGLIAVPVQLSEPGNAGTLIRVADA  121

Query  132  MGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLRAAGLQVLATAVDG  191
            MGAAAV+LAG SVDPYN KCLRAS GSIF+IPV+  PD    +  LR AGL+VLAT VDG
Sbjct  122  MGAAAVVLAGNSVDPYNSKCLRASAGSIFSIPVISDPDEARVVQRLRDAGLRVLATTVDG  181

Query  192  EMALDDAD--RLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAESLNVAAAAAIC  249
            E  LDD D    L EPTAWLFGPEAHGLS ++AA+A  RV I M G AESLN+A+AA+IC
Sbjct  182  EADLDDPDLEAELTEPTAWLFGPEAHGLSTDLAAMAHRRVQIPMPGHAESLNIASAASIC  241

Query  250  LYESARALGRR  260
            LY+SARA  RR
Sbjct  242  LYQSARAQRRR  252


>gi|145224123|ref|YP_001134801.1| tRNA/rRNA methyltransferase SpoU [Mycobacterium gilvum PYR-GCK]
 gi|145216609|gb|ABP46013.1| tRNA/rRNA methyltransferase (SpoU) [Mycobacterium gilvum PYR-GCK]
Length=252

 Score =  318 bits (815),  Expect = 5e-85, Method: Compositional matrix adjust.
 Identities = 172/244 (71%), Positives = 191/244 (79%), Gaps = 4/244 (1%)

Query  9    VATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELLLAAHEASV  68
            +A AVKLHRH GRRRA RFLAEGPNLV AAL RGLV EVF TE AA R   LLA   A V
Sbjct  1    MAAAVKLHRHTGRRRAARFLAEGPNLVEAALRRGLVSEVFATESAADRFGPLLAG--APV  58

Query  69   HLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIREPGNAGTVIRI  128
            HLVTE+AAKALSDTVTP GLVAVC LP   L +VLAG P L+AV V I EPGNAGTVIR+
Sbjct  59   HLVTEKAAKALSDTVTPVGLVAVCTLPEVDLTEVLAGEPTLVAVPVGISEPGNAGTVIRV  118

Query  129  ADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLRAAGLQVLATA  188
            ADAMGA AV+LAG SVDPYNGKCLRAS GSIF+IPV+   D    +  L+ AGLQVLAT 
Sbjct  119  ADAMGADAVVLAGDSVDPYNGKCLRASAGSIFSIPVISHHDAADVVTQLKDAGLQVLATV  178

Query  189  VDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAESLNVAAAAAI  248
            + G ++LD+ D  L+ PTAWLFGPEAHGL AE+AALA   V I M+GGAESLNVA+AAAI
Sbjct  179  LGGSVSLDEVD--LSGPTAWLFGPEAHGLPAEVAALATAGVEIPMTGGAESLNVASAAAI  236

Query  249  CLYE  252
            CLY+
Sbjct  237  CLYQ  240


>gi|108799944|ref|YP_640141.1| tRNA/rRNA methyltransferase SpoU [Mycobacterium sp. MCS]
 gi|119869054|ref|YP_939006.1| tRNA/rRNA methyltransferase SpoU [Mycobacterium sp. KMS]
 gi|108770363|gb|ABG09085.1| tRNA/rRNA methyltransferase (SpoU) [Mycobacterium sp. MCS]
 gi|119695143|gb|ABL92216.1| tRNA/rRNA methyltransferase (SpoU) [Mycobacterium sp. KMS]
Length=248

 Score =  318 bits (814),  Expect = 6e-85, Method: Compositional matrix adjust.
 Identities = 178/249 (72%), Positives = 200/249 (81%), Gaps = 4/249 (1%)

Query  9    VATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELLLAAHEASV  68
            +A AVKLHRHVGRRRA RFLAEGPNLV AAL RG+V EVF TE AA R   LLA  +  V
Sbjct  1    MAAAVKLHRHVGRRRAARFLAEGPNLVEAALRRGVVSEVFATEDAAARFAALLAGAD--V  58

Query  69   HLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIREPGNAGTVIRI  128
            HLVTERAAKALSDTVTP GLVAVC +P   L++VL  SP+L+AV VE  EPGNAGT+IR+
Sbjct  59   HLVTERAAKALSDTVTPVGLVAVCRMPEVSLDEVLGASPRLVAVAVETSEPGNAGTLIRL  118

Query  129  ADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLRAAGLQVLATA  188
            ADAMGA AVILAG SVDPYNGKCLRAS GSIF + VV APD    +A L  AGL VLAT 
Sbjct  119  ADAMGADAVILAGNSVDPYNGKCLRASAGSIFGVSVVEAPDTAGLVAALHGAGLTVLATM  178

Query  189  VDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAESLNVAAAAAI  248
            +DGE++LDDA+  L+ PTAWLFG EAHGL+ ++AALAD RV I M+G AESLNVAAAAAI
Sbjct  179  LDGEVSLDDAE--LSGPTAWLFGAEAHGLAPDVAALADARVTIPMAGSAESLNVAAAAAI  236

Query  249  CLYESARAL  257
            CLY+SARAL
Sbjct  237  CLYQSARAL  245


>gi|315444459|ref|YP_004077338.1| rRNA methylase [Mycobacterium sp. Spyr1]
 gi|315262762|gb|ADT99503.1| rRNA methylase [Mycobacterium sp. Spyr1]
Length=249

 Score =  314 bits (804),  Expect = 9e-84, Method: Compositional matrix adjust.
 Identities = 171/248 (69%), Positives = 191/248 (78%), Gaps = 4/248 (1%)

Query  9    VATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELLLAAHEASV  68
            +A AVKLHRH GRRRA RFLAEGPNLV AAL RGLV EVF TE AA R   LLA   A V
Sbjct  1    MAAAVKLHRHTGRRRAARFLAEGPNLVEAALRRGLVSEVFATESAADRFGPLLAG--APV  58

Query  69   HLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIREPGNAGTVIRI  128
            HLVTE+AAKALSDTVTP GLVAVC LP   L +VL G P L+AV V I EPGNAGTVIR+
Sbjct  59   HLVTEKAAKALSDTVTPVGLVAVCTLPEVDLAEVLTGEPTLVAVPVGISEPGNAGTVIRV  118

Query  129  ADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLRAAGLQVLATA  188
            ADAMGA AV+LAG SVDPYNGKCLRAS GSIF+IPV+   D    +  L+ +GLQVLAT 
Sbjct  119  ADAMGADAVVLAGDSVDPYNGKCLRASAGSIFSIPVISHHDAVGVVTQLKGSGLQVLATV  178

Query  189  VDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAESLNVAAAAAI  248
            + G + LD+ D  L+ PTAWLFGPEAHGL A++ ALA   V I M+GGAESLNVA+AAAI
Sbjct  179  LGGSVPLDEVD--LSGPTAWLFGPEAHGLPADVVALATAGVEIPMAGGAESLNVASAAAI  236

Query  249  CLYESARA  256
            CLY+SA A
Sbjct  237  CLYQSAAA  244


>gi|169629410|ref|YP_001703059.1| tRNA/rRNA methyltransferase [Mycobacterium abscessus ATCC 19977]
 gi|169241377|emb|CAM62405.1| Possible tRNA/rRNA methyltransferase [Mycobacterium abscessus]
Length=250

 Score =  281 bits (718),  Expect = 9e-74, Method: Compositional matrix adjust.
 Identities = 154/244 (64%), Positives = 178/244 (73%), Gaps = 2/244 (0%)

Query  12   AVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELLLAAHEASVHLV  71
            AVKLHR   RRRAG FLAEGPNLV AAL  G V  +F T+ A  R   LLA  EA V  V
Sbjct  4    AVKLHRPAARRRAGLFLAEGPNLVEAALRSGAVERIFATDAAIERFVDLLA--EAPVRRV  61

Query  72   TERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIREPGNAGTVIRIADA  131
            TERAAKALSDTVTP GLVA C    +    V A SP+ + V V+I EPGNAGT+IR+ADA
Sbjct  62   TERAAKALSDTVTPVGLVAQCRTVVSTWSQVTARSPRFVIVAVDISEPGNAGTLIRVADA  121

Query  132  MGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLRAAGLQVLATAVDG  191
            MGA AV+LAG SVDP+NGK LRAS GSIF IPVV   DVGA  ADL   G+ +LAT +DG
Sbjct  122  MGADAVVLAGNSVDPFNGKSLRASAGSIFNIPVVPEGDVGAIAADLAQTGVALLATTLDG  181

Query  192  EMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAESLNVAAAAAICLY  251
            +++LD+AD +LA P AW FG EAHGL    AALA HR++I M GGAESLN+A+AA+ICLY
Sbjct  182  DLSLDEADAVLAGPCAWFFGNEAHGLDGATAALATHRINIPMRGGAESLNLASAASICLY  241

Query  252  ESAR  255
             +AR
Sbjct  242  ATAR  245


>gi|296140117|ref|YP_003647360.1| tRNA/rRNA methyltransferase SpoU [Tsukamurella paurometabola 
DSM 20162]
 gi|296028251|gb|ADG79021.1| tRNA/rRNA methyltransferase (SpoU) [Tsukamurella paurometabola 
DSM 20162]
Length=265

 Score =  268 bits (684),  Expect = 8e-70, Method: Compositional matrix adjust.
 Identities = 152/256 (60%), Positives = 185/256 (73%), Gaps = 8/256 (3%)

Query  1    VLTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELL  60
            + TER+ RV +A KL R  GRR+AG FLAEG N V +ALA GLV E+FVTE  A R+  L
Sbjct  12   LFTERTPRVVSASKLLRAAGRRKAGLFLAEGSNAVTSALAAGLVDEIFVTEDGAARYPDL  71

Query  61   LAAHEASVHLVTERAAKALSDTVTPAGLVAVCD-LPATRLEDVLAGSPQLIAVTVEIREP  119
            L      V  VT+RA + LSDTVTP G+VAVC  LP  R+ D      +L+AV V++ EP
Sbjct  72   LTGR---VAYVTDRAMRGLSDTVTPPGIVAVCRALPEGRVPD----GARLVAVPVDVAEP  124

Query  120  GNAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLRA  179
            GNAGTVIR+ADA+GA AV+LAG +VDP NGK +RAS GS+F +PVV   D  AAIA L+ 
Sbjct  125  GNAGTVIRVADAVGADAVLLAGDAVDPMNGKVVRASAGSVFHLPVVQERDASAAIAQLKE  184

Query  180  AGLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAES  239
            +GL VLATA DGE++LDDAD +LA PTAWLFG EAHGL   + A ADHR+ I + G AES
Sbjct  185  SGLTVLATAADGEVSLDDADEMLAAPTAWLFGNEAHGLPRGLQAAADHRIAIPIRGRAES  244

Query  240  LNVAAAAAICLYESAR  255
            LN+A AA+ICLY S+R
Sbjct  245  LNLATAASICLYASSR  260


>gi|229492736|ref|ZP_04386537.1| tRNA/rRNA methyltransferase [Rhodococcus erythropolis SK121]
 gi|229320395|gb|EEN86215.1| tRNA/rRNA methyltransferase [Rhodococcus erythropolis SK121]
Length=276

 Score =  267 bits (683),  Expect = 9e-70, Method: Compositional matrix adjust.
 Identities = 156/268 (59%), Positives = 188/268 (71%), Gaps = 10/268 (3%)

Query  2    LTERSARVATAVKLHRHVGRRRAGRFLAEGPN----LVAAALARGLVR---EVFVTEVAA  54
            LTER+ RV +AVKL R   RR+AGRFL EG N    L+  AL+ G  R   ++F TE AA
Sbjct  4    LTERTPRVVSAVKLLRTAERRKAGRFLVEGENSVTELLNGALSNGEARPVHDLFYTEDAA  63

Query  55   RRHELLLA---AHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIA  111
             R++ ++        SV LVT+RA KALSDTVTP GLVAV DL    L   +    +L+A
Sbjct  64   ERYQHVIDRALTAGVSVALVTDRAIKALSDTVTPPGLVAVSDLLDVPLSAAVHQETRLLA  123

Query  112  VTVEIREPGNAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVG  171
            V VE+ EPGNAGTVIRIADA+GA A ILAG SVDP+NGK +R+S GS+F +PVV   D  
Sbjct  124  VPVEVNEPGNAGTVIRIADAVGADAAILAGDSVDPHNGKVVRSSAGSLFHLPVVRDRDTV  183

Query  172  AAIADLRAAGLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHI  231
            + I  +RAAG+Q+LATA DGE+ LD+AD LL++PTAWLFG EAHGL   IAA ADHRV I
Sbjct  184  SVIEQIRAAGIQILATAADGEVDLDEADELLSKPTAWLFGNEAHGLDPAIAAQADHRVRI  243

Query  232  LMSGGAESLNVAAAAAICLYESARALGR  259
             + G AESLN+A AAAICLY SAR   R
Sbjct  244  PIHGRAESLNLATAAAICLYASARVQNR  271


>gi|226306779|ref|YP_002766739.1| RNA methyltransferase [Rhodococcus erythropolis PR4]
 gi|226185896|dbj|BAH34000.1| putative RNA methyltransferase [Rhodococcus erythropolis PR4]
Length=276

 Score =  265 bits (678),  Expect = 4e-69, Method: Compositional matrix adjust.
 Identities = 157/268 (59%), Positives = 189/268 (71%), Gaps = 10/268 (3%)

Query  2    LTERSARVATAVKLHRHVGRRRAGRFLAEGPN----LVAAALARGLVR---EVFVTEVAA  54
            LTER+ RV +AVKL R   RR+AGRFL EG N    L+  AL+ G  R   ++F TE AA
Sbjct  4    LTERTPRVVSAVKLLRTAERRKAGRFLVEGENSVTELLNGALSNGEARPVHDLFYTEDAA  63

Query  55   RRHELLLA-AHEASVH--LVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIA  111
             R++ ++  A  A V   LVT+RA KALSDTVTP GLVAV DL    L   +    +L+A
Sbjct  64   ERYQHVIDRALTAGVRVALVTDRAIKALSDTVTPPGLVAVSDLLDVPLSAAVHQETRLLA  123

Query  112  VTVEIREPGNAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVG  171
            V VE+ EPGNAGTVIRIADA+GA A ILAG SVDP+NGK +R+S GS+F +PVV   D  
Sbjct  124  VPVEVNEPGNAGTVIRIADAVGADAAILAGDSVDPHNGKVVRSSAGSLFHLPVVRDRDTV  183

Query  172  AAIADLRAAGLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHI  231
            + I  +RAAG+Q+LATA DGE+ LD+AD LL++PTAWLFG EAHGL   IAA ADHRV I
Sbjct  184  SVIEQIRAAGIQILATAADGEVDLDEADELLSKPTAWLFGNEAHGLDPAIAAQADHRVRI  243

Query  232  LMSGGAESLNVAAAAAICLYESARALGR  259
             + G AESLN+A AAAICLY SAR   R
Sbjct  244  PIHGRAESLNLATAAAICLYASARVQNR  271


>gi|62390273|ref|YP_225675.1| 23S ribosomal RNA methyltransferase [Corynebacterium glutamicum 
ATCC 13032]
 gi|41325610|emb|CAF21399.1| 23S RIBOSOMAL RNA METHYLTRANSFERASE [Corynebacterium glutamicum 
ATCC 13032]
Length=282

 Score =  264 bits (675),  Expect = 9e-69, Method: Compositional matrix adjust.
 Identities = 136/259 (53%), Positives = 177/259 (69%), Gaps = 3/259 (1%)

Query  2    LTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELLL  61
             TER+ R+  A KLHR   R++  RFL EG N V AA+A G   ++FVTE AA R E ++
Sbjct  20   FTERTPRIVNAAKLHRAAQRKKDKRFLVEGENSVEAAVATGAATDLFVTESAAERFEEIV  79

Query  62   ---AAHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIRE  118
                      H +T++AAK LSDTVT  G+ A+CD     +   + G P+L++V VE RE
Sbjct  80   RTAGYMNVYTHAITDKAAKHLSDTVTTTGIFALCDDVLWSVGKAITGQPRLVSVPVETRE  139

Query  119  PGNAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLR  178
            PGNAGT+IR++DA+GA AV+ AG SVDP   K +R+S GS+F IPV    ++   +  LR
Sbjct  140  PGNAGTLIRVSDAVGADAVVFAGESVDPLGAKAVRSSAGSLFHIPVARNNNIADVLGQLR  199

Query  179  AAGLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAE  238
            + GLQ+LAT+ DGE+ LDDAD LLA+PTAWLFG EAHGL   + A ADHRV I + G AE
Sbjct  200  SKGLQILATSADGEVDLDDADELLAKPTAWLFGNEAHGLDESLLAQADHRVRIPIRGRAE  259

Query  239  SLNVAAAAAICLYESARAL  257
            SLN+A AA+ICLYES++AL
Sbjct  260  SLNLATAASICLYESSKAL  278


>gi|145295523|ref|YP_001138344.1| hypothetical protein cgR_1451 [Corynebacterium glutamicum R]
 gi|140845443|dbj|BAF54442.1| hypothetical protein [Corynebacterium glutamicum R]
 gi|344043407|gb|EGV39100.1| 23S ribosomal RNA methyltransferase [Corynebacterium glutamicum 
S9114]
Length=271

 Score =  264 bits (674),  Expect = 1e-68, Method: Compositional matrix adjust.
 Identities = 136/259 (53%), Positives = 177/259 (69%), Gaps = 3/259 (1%)

Query  2    LTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELLL  61
             TER+ R+  A KLHR   R++  RFL EG N V AA+A G   ++FVTE AA R E ++
Sbjct  9    FTERTPRIVNAAKLHRAAQRKKDKRFLVEGENSVEAAVATGAATDLFVTESAAERFEEIV  68

Query  62   ---AAHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIRE  118
                      H +T++AAK LSDTVT  G+ A+CD     +   + G P+L++V VE RE
Sbjct  69   RTAGYMNVYTHAITDKAAKHLSDTVTTTGIFALCDDVLWSVGKAITGQPRLVSVPVETRE  128

Query  119  PGNAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLR  178
            PGNAGT+IR++DA+GA AV+ AG SVDP   K +R+S GS+F IPV    ++   +  LR
Sbjct  129  PGNAGTLIRVSDAVGADAVVFAGESVDPLGAKAVRSSAGSLFHIPVARNNNIADVLGQLR  188

Query  179  AAGLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAE  238
            + GLQ+LAT+ DGE+ LDDAD LLA+PTAWLFG EAHGL   + A ADHRV I + G AE
Sbjct  189  SKGLQILATSADGEVDLDDADELLAKPTAWLFGNEAHGLDESLLAQADHRVRIPIRGRAE  248

Query  239  SLNVAAAAAICLYESARAL  257
            SLN+A AA+ICLYES++AL
Sbjct  249  SLNLATAASICLYESSKAL  267


>gi|111017974|ref|YP_700946.1| tRNA/rRNA methyltransferase [Rhodococcus jostii RHA1]
 gi|110817504|gb|ABG92788.1| tRNA/rRNA methyltransferase [Rhodococcus jostii RHA1]
Length=269

 Score =  261 bits (668),  Expect = 6e-68, Method: Compositional matrix adjust.
 Identities = 155/262 (60%), Positives = 186/262 (71%), Gaps = 3/262 (1%)

Query  2    LTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRH-ELL  60
            LTER+ RV +AVKL R   RR+ GRFL EG N V  AL    V ++F TE A +R+  L+
Sbjct  4    LTERTPRVVSAVKLLRTAERRKVGRFLVEGENSVGEALDTRPVHDLFYTEDAEQRYARLI  63

Query  61   LAAHEASVH--LVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIRE  118
              AH A V   LVT+RA +ALSDTVTP GLVAVCDL    L + +    +L+AV V + E
Sbjct  64   DRAHTAGVRTSLVTDRAVRALSDTVTPPGLVAVCDLLDVPLAEAIGPGTRLLAVPVAVAE  123

Query  119  PGNAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLR  178
            PGNAGTVIR+ADA+GA A ILAG SVDP+NGKC+RAS GS+F +PVV   D  A +  + 
Sbjct  124  PGNAGTVIRVADAVGADAAILAGDSVDPHNGKCVRASAGSLFHLPVVRERDTAAVLDSIS  183

Query  179  AAGLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAE  238
            AAG+Q+LATA DGE+ LDDAD LLA PTAWLFG EAHGL A  +A ADHRV I + G AE
Sbjct  184  AAGIQLLATAADGEVDLDDADELLARPTAWLFGNEAHGLDAATSARADHRVRIPIHGRAE  243

Query  239  SLNVAAAAAICLYESARALGRR  260
            SLN+A AA+ICLY SAR   R+
Sbjct  244  SLNLATAASICLYSSARVQNRK  265


>gi|325674243|ref|ZP_08153932.1| SpoU family rRNA methyltransferase [Rhodococcus equi ATCC 33707]
 gi|325554923|gb|EGD24596.1| SpoU family rRNA methyltransferase [Rhodococcus equi ATCC 33707]
Length=266

 Score =  261 bits (667),  Expect = 7e-68, Method: Compositional matrix adjust.
 Identities = 155/262 (60%), Positives = 186/262 (71%), Gaps = 3/262 (1%)

Query  2    LTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELLL  61
             TER+ RV +AVKL R   RR+ GRFL EG N VA AL  GLV E+F TE AA R+  L+
Sbjct  4    FTERTPRVVSAVKLLRGAERRKTGRFLVEGENAVAEALIAGLVHELFFTEQAAERYPHLI  63

Query  62   ---AAHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIRE  118
                A      LVT+RA +ALSDTVTP G+VAVCDL    L   +    +L+AV V I E
Sbjct  64   ERAVADGVRGSLVTDRAIRALSDTVTPPGVVAVCDLLDVPLATAVTSRTRLLAVPVAIGE  123

Query  119  PGNAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLR  178
            PGNAGTVIR+ADA+GA A ILAG SVDP+NGKC+R+S GS+F IP+V   +V A +  L 
Sbjct  124  PGNAGTVIRVADAVGADAAILAGDSVDPHNGKCVRSSAGSLFHIPIVRERNVDAVLDALT  183

Query  179  AAGLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAE  238
            +AG+Q+LATA DGE+ LD+AD LLA PTAWLFG EAHGL A +A  ADHRV I + G AE
Sbjct  184  SAGIQILATAADGEVDLDEADDLLARPTAWLFGNEAHGLDAAVARRADHRVRIPIRGRAE  243

Query  239  SLNVAAAAAICLYESARALGRR  260
            SLN+A AA+ICLY SAR  GR+
Sbjct  244  SLNLATAASICLYASARVQGRQ  265


>gi|226360105|ref|YP_002777883.1| RNA methyltransferase [Rhodococcus opacus B4]
 gi|226238590|dbj|BAH48938.1| putative RNA methyltransferase [Rhodococcus opacus B4]
Length=269

 Score =  260 bits (665),  Expect = 1e-67, Method: Compositional matrix adjust.
 Identities = 156/262 (60%), Positives = 186/262 (71%), Gaps = 3/262 (1%)

Query  2    LTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELLL  61
            LTER+ RV +AVKL R   RR+ GRFL EG N V  ALA   V ++F T  A +R+  L+
Sbjct  4    LTERTPRVVSAVKLLRTAERRKVGRFLVEGENSVGEALATHPVHDLFYTADAEQRYSALI  63

Query  62   A-AHEASVH--LVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIRE  118
              AH A V   LVT+RA +ALSDTVTP GLVAVC+L    L + L    +L+AV V + E
Sbjct  64   ERAHAAGVRTSLVTDRAVRALSDTVTPPGLVAVCELLDVPLAEALGPGTRLLAVPVAVAE  123

Query  119  PGNAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLR  178
            PGNAGTVIR+ADA+GA A ILAG SVDP+NGKC+RAS GS+F +PVV   D  A +  + 
Sbjct  124  PGNAGTVIRVADAVGADAAILAGDSVDPHNGKCVRASAGSLFHLPVVRERDTAAVLDTIS  183

Query  179  AAGLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAE  238
            AAG+Q+LATA DGE+ LDDAD LLA PTAWLFG EAHGL A  AA ADHRV I + G AE
Sbjct  184  AAGIQLLATAADGEVDLDDADELLARPTAWLFGNEAHGLDAATAARADHRVRIPIHGRAE  243

Query  239  SLNVAAAAAICLYESARALGRR  260
            SLN+A AA+ICLY SAR   R+
Sbjct  244  SLNLATAASICLYSSARVQNRK  265


>gi|54023885|ref|YP_118127.1| putative ribosomal RNA methyltransferase [Nocardia farcinica 
IFM 10152]
 gi|54015393|dbj|BAD56763.1| putative ribosomal RNA methyltransferase [Nocardia farcinica 
IFM 10152]
Length=279

 Score =  260 bits (664),  Expect = 2e-67, Method: Compositional matrix adjust.
 Identities = 155/261 (60%), Positives = 187/261 (72%), Gaps = 3/261 (1%)

Query  2    LTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARR-HELL  60
            L+ER+ RV +AVKLHR   RRR G FLAEG N V AAL  G VRE+F +  AA R HEL+
Sbjct  14   LSERNPRVVSAVKLHRAAHRRRTGLFLAEGANAVTAALDTGRVRELFYSAAAAEREHELV  73

Query  61   LAAHEASVH--LVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIRE  118
              A    V   LV++RAA+ L +TVT  GLVAVC+     L +VLA  P+L+AV VEI E
Sbjct  74   ATAAATGVRTTLVSDRAAEHLGETVTAPGLVAVCEQIDVPLPEVLARDPRLLAVPVEIAE  133

Query  119  PGNAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLR  178
            PGNAGT+IR+ADA+GA  V+LAG +VDP+NGKC+RAS GS+F +PVV   +V   +  L 
Sbjct  134  PGNAGTLIRVADAVGADGVVLAGHTVDPHNGKCVRASAGSLFHVPVVRGREVVPTLDALH  193

Query  179  AAGLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAE  238
            AAGL +LATA DGE+ LD+AD +LA P AWLFG EAHGL   +AA ADHRV I + G AE
Sbjct  194  AAGLTLLATAADGEVVLDEADEILAGPVAWLFGNEAHGLDPAVAARADHRVRIPIHGRAE  253

Query  239  SLNVAAAAAICLYESARALGR  259
            SLN+AAAAAICLY SAR   R
Sbjct  254  SLNLAAAAAICLYASARVHHR  274


>gi|312139879|ref|YP_004007215.1| tRNA/rRNA methyltransferase [Rhodococcus equi 103S]
 gi|311889218|emb|CBH48532.1| putative tRNA/rRNA methyltransferase [Rhodococcus equi 103S]
Length=266

 Score =  259 bits (661),  Expect = 4e-67, Method: Compositional matrix adjust.
 Identities = 154/262 (59%), Positives = 185/262 (71%), Gaps = 3/262 (1%)

Query  2    LTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELLL  61
             TER+ RV +AVKL R   RR+ GRFL EG N VA AL  G V E+F TE AA R+  L+
Sbjct  4    FTERTPRVVSAVKLLRGAERRKTGRFLVEGENAVAEALIAGPVHELFFTEQAAERYPHLI  63

Query  62   ---AAHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIRE  118
                A      LVT+RA +ALSDTVTP G+VAVCDL    L   +    +L+AV V I E
Sbjct  64   ERAVADGVRGSLVTDRAIRALSDTVTPPGVVAVCDLLDVPLATAVTSRTRLLAVPVAIGE  123

Query  119  PGNAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLR  178
            PGNAGTVIR+ADA+GA A ILAG SVDP+NGKC+R+S GS+F IP+V   +V A +  L 
Sbjct  124  PGNAGTVIRVADAVGADAAILAGDSVDPHNGKCVRSSAGSLFHIPIVRERNVDAVLDALT  183

Query  179  AAGLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAE  238
            +AG+Q+LATA DGE+ LD+AD LLA PTAWLFG EAHGL A +A  ADHRV I + G AE
Sbjct  184  SAGIQILATAADGEVDLDEADDLLARPTAWLFGNEAHGLDAAVARRADHRVRIPIRGRAE  243

Query  239  SLNVAAAAAICLYESARALGRR  260
            SLN+A AA+ICLY SAR  GR+
Sbjct  244  SLNLATAASICLYASARVQGRQ  265


>gi|260577991|ref|ZP_05845915.1| rRNA methylase [Corynebacterium jeikeium ATCC 43734]
 gi|258603881|gb|EEW17134.1| rRNA methylase [Corynebacterium jeikeium ATCC 43734]
Length=285

 Score =  253 bits (646),  Expect = 2e-65, Method: Compositional matrix adjust.
 Identities = 135/258 (53%), Positives = 173/258 (68%), Gaps = 3/258 (1%)

Query  1    VLTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELL  60
            + TER+ R+  A KLHR   R++AG FL EG N V AA+A G   +V+VT  AA R E +
Sbjct  13   LFTERTPRIVNAAKLHRSAARKKAGVFLVEGENSVEAAIATGSATDVYVTLAAAERFEPI  72

Query  61   L---AAHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIR  117
            +         VH +T++AAK LSDT T  GL AVC      +  VL   PQL++V VE  
Sbjct  73   IRTAGYLNIYVHYITDKAAKHLSDTATTTGLFAVCKPVLWSVGKVLTPQPQLVSVPVETN  132

Query  118  EPGNAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADL  177
            +PGNAGT+IR+ADAMGA AV+ AG + DP + K  RAS GS+F +PV  + +V   +  L
Sbjct  133  DPGNAGTLIRVADAMGADAVVFAGETADPQSCKAARASAGSLFHVPVARSTNVKDVLGQL  192

Query  178  RAAGLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGA  237
            RA GLQ+LATA DGE++LDDA  +L +PTAWLFG EAHGL  E+ A AD RV I + G A
Sbjct  193  RAQGLQILATAADGEVSLDDAGEILTKPTAWLFGNEAHGLGEELLAEADLRVSIPIRGRA  252

Query  238  ESLNVAAAAAICLYESAR  255
            ESLN+A AA+IC+YES+R
Sbjct  253  ESLNLATAASICMYESSR  270


>gi|300781270|ref|ZP_07091124.1| TrmH family rRNA methyltransferase [Corynebacterium genitalium 
ATCC 33030]
 gi|300532977|gb|EFK54038.1| TrmH family rRNA methyltransferase [Corynebacterium genitalium 
ATCC 33030]
Length=269

 Score =  251 bits (641),  Expect = 8e-65, Method: Compositional matrix adjust.
 Identities = 134/260 (52%), Positives = 178/260 (69%), Gaps = 3/260 (1%)

Query  2    LTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELLL  61
             TER+ RV  A KL+R  GR++AGRFLAEG N V AA+A G   ++FVTE AA R   ++
Sbjct  9    FTERTPRVVNAAKLNRAAGRKKAGRFLAEGENSVEAAVATGAATDLFVTEAAADRFYDVV  68

Query  62   ---AAHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIRE  118
               A  +   H +T++AA++L+DTV   G+ AVC      L  VL G P+L+AV V   +
Sbjct  69   TTAAYMDVFTHAITDKAAQSLTDTVHTTGVFAVCKPVTWTLGSVLTGRPKLVAVCVGTND  128

Query  119  PGNAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLR  178
            PGNAGT+IR+ DA+GA AVI AG +VDP + K +R+S GS+F +PV    DV  AI  LR
Sbjct  129  PGNAGTIIRLVDALGADAVIFAGDTVDPESPKVVRSSAGSLFHVPVARERDVNGAIGQLR  188

Query  179  AAGLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAE  238
            AAGL++ AT + GE++LDD    L +PTAWLFG EAHGL  ++ A AD+RV I + G AE
Sbjct  189  AAGLKLAATTMGGEVSLDDPGNALDQPTAWLFGNEAHGLPDDVLAAADYRVSIPIKGSAE  248

Query  239  SLNVAAAAAICLYESARALG  258
            SLN++ AA+ICL+ESA+ LG
Sbjct  249  SLNLSTAASICLWESAKMLG  268


>gi|343928312|ref|ZP_08767764.1| putative RNA methyltransferase [Gordonia alkanivorans NBRC 16433]
 gi|343761782|dbj|GAA14690.1| putative RNA methyltransferase [Gordonia alkanivorans NBRC 16433]
Length=269

 Score =  250 bits (639),  Expect = 1e-64, Method: Compositional matrix adjust.
 Identities = 146/265 (56%), Positives = 183/265 (70%), Gaps = 6/265 (2%)

Query  1    VLTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELL  60
            +L+ERS+RV +  KLHR   RR  GRFLAEG N V++ALA      V V +    RH+ +
Sbjct  4    ILSERSSRVVSYAKLHRAAERREQGRFLAEGANSVSSALAVDRAEVVLVADEDQLRHQGI  63

Query  61   LAAHEAS---VHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIR  117
             AA EA+   V +++ RAA  L++T TP G+ AVC L    LE VLA  P+L+A+ VE R
Sbjct  64   TAAAEAAGVPVLVISARAASKLAETSTPPGIFAVCPLLDVPLEAVLADEPRLLAIAVEPR  123

Query  118  EPGNAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADL  177
            EPGNAGT+IR ADAMGA AV+L G +VDP+NGKC+RAS GS+F +PVV    +   +  +
Sbjct  124  EPGNAGTLIRCADAMGADAVVLLGDAVDPHNGKCVRASAGSVFTVPVVRQRALTEGLDAI  183

Query  178  RAAGLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGA  237
              AG+ +LATA DGE+ LD A  +L+    WLFG EAHGLSA+I A ADHRV I + G A
Sbjct  184  AGAGISLLATAADGEVNLDHAAEVLSGRVGWLFGNEAHGLSADIQAAADHRVSIPIRGRA  243

Query  238  ESLNVAAAAAICLYESAR---ALGR  259
            ESLNVAAAAAICLYESAR   A+GR
Sbjct  244  ESLNVAAAAAICLYESARVHNAVGR  268


>gi|262202744|ref|YP_003273952.1| tRNA/rRNA methyltransferase SpoU [Gordonia bronchialis DSM 43247]
 gi|262086091|gb|ACY22059.1| tRNA/rRNA methyltransferase (SpoU) [Gordonia bronchialis DSM 
43247]
Length=269

 Score =  250 bits (639),  Expect = 1e-64, Method: Compositional matrix adjust.
 Identities = 147/262 (57%), Positives = 181/262 (70%), Gaps = 7/262 (2%)

Query  1    VLTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELL  60
            VL+ERS+RV +  KLHR   RR  GRFL EG N V AAL  G  + + V +    RH  L
Sbjct  3    VLSERSSRVVSYAKLHRAAARREQGRFLVEGVNAVQAALRSGHAQIMLVPDDDQDRHASL  62

Query  61   LA-AHEASVHLVTER--AAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIR  117
            +A A +A V +V  R  AA  L++T TP G+ AVC L    L+ VLA +P+L+AV VE R
Sbjct  63   IAEARDAGVDVVAIRPQAAVKLAETSTPTGIFAVCGLLDDSLDRVLAAAPRLLAVGVEPR  122

Query  118  EPGNAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADL  177
            EPGNAGT+IR ADAMGA AV+L G +VDP+NGKC+R+S GSIF +P+V    V  A++ +
Sbjct  123  EPGNAGTLIRCADAMGADAVVLLGDAVDPHNGKCVRSSAGSIFHLPIVRERSVSDALSAI  182

Query  178  RAAGLQVLATAVDGEMAL----DDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILM  233
             AAG+ VLATA DGE+ L    DDAD LL  PTAWLFG EAHGL  ++ A+ADHRV + +
Sbjct  183  AAAGVCVLATAADGELILDDISDDADGLLTRPTAWLFGNEAHGLPVDVQAMADHRVAVPI  242

Query  234  SGGAESLNVAAAAAICLYESAR  255
             G AESLNVAA AAICLY SAR
Sbjct  243  RGRAESLNVAATAAICLYASAR  264


>gi|227488138|ref|ZP_03918454.1| TrmH family rRNA methyltransferase [Corynebacterium glucuronolyticum 
ATCC 51867]
 gi|227092000|gb|EEI27312.1| TrmH family rRNA methyltransferase [Corynebacterium glucuronolyticum 
ATCC 51867]
Length=436

 Score =  248 bits (634),  Expect = 5e-64, Method: Compositional matrix adjust.
 Identities = 132/258 (52%), Positives = 175/258 (68%), Gaps = 3/258 (1%)

Query  1    VLTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELL  60
            + TER+ RV  A KL R   R++  RFL EG N V AA+A G   ++F+T+ AA R   +
Sbjct  103  IFTERTPRVVNAAKLKRSAVRKKEKRFLVEGENSVEAAVATGAATDIFLTKSAAARFTDI  162

Query  61   LAAHEA---SVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIR  117
            +AA +A    VH + E+AAK+L DTVT  G+ AVC        DVL G P+L++V VE  
Sbjct  163  VAAAKAMGMYVHFIDEKAAKSLQDTVTSTGIFAVCREVLWSARDVLNGRPKLVSVPVETN  222

Query  118  EPGNAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADL  177
            EPGNAGT+IR+ADAMGA  V+ AG +VDP +GK  R+S GS+F IPV    ++   ++ L
Sbjct  223  EPGNAGTLIRVADAMGADCVLFAGDTVDPQSGKAARSSAGSLFHIPVARERNIMKVVSML  282

Query  178  RAAGLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGA  237
            R  GL + ATA DGE+ L DA+ LL++PTAWLFG EAHGL  E+ A AD+RV I + G A
Sbjct  283  RERGLAIAATAADGEVDLTDAEDLLSQPTAWLFGNEAHGLPEEVQAQADYRVRIPIRGRA  342

Query  238  ESLNVAAAAAICLYESAR  255
            ESLN+A AA+ICL+ES++
Sbjct  343  ESLNLATAASICLFESSK  360


>gi|227541536|ref|ZP_03971585.1| TrmH family rRNA methyltransferase [Corynebacterium glucuronolyticum 
ATCC 51866]
 gi|227182692|gb|EEI63664.1| TrmH family rRNA methyltransferase [Corynebacterium glucuronolyticum 
ATCC 51866]
Length=436

 Score =  248 bits (633),  Expect = 7e-64, Method: Compositional matrix adjust.
 Identities = 132/258 (52%), Positives = 175/258 (68%), Gaps = 3/258 (1%)

Query  1    VLTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELL  60
            + TER+ RV  A KL R   R++  RFL EG N V AA+A G   ++F+T+ AA R   +
Sbjct  103  IFTERTPRVVNAAKLKRSAVRKKEKRFLVEGENSVEAAVATGAATDIFLTKSAAARFTDI  162

Query  61   LAAHEA---SVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIR  117
            +AA +A    VH + E+AAK+L DTVT  G+ AVC        DVL G P+L++V VE  
Sbjct  163  VAAAKAMGMYVHFIDEKAAKSLQDTVTSTGIFAVCREVLWSARDVLNGRPKLVSVPVETN  222

Query  118  EPGNAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADL  177
            EPGNAGT+IR+ADAMGA  V+ AG +VDP +GK  R+S GS+F IPV    ++   ++ L
Sbjct  223  EPGNAGTLIRVADAMGADCVLFAGDTVDPQSGKAARSSAGSLFHIPVARERNIMKVVSML  282

Query  178  RAAGLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGA  237
            R  GL + ATA DGE+ L DA+ LL++PTAWLFG EAHGL  E+ A AD+RV I + G A
Sbjct  283  RERGLAIAATAADGEVDLTDAEDLLSQPTAWLFGNEAHGLPEELQAQADYRVRIPIRGRA  342

Query  238  ESLNVAAAAAICLYESAR  255
            ESLN+A AA+ICL+ES++
Sbjct  343  ESLNLATAASICLFESSK  360


>gi|334696740|gb|AEG81537.1| hypothetical protein CULC809_01001 [Corynebacterium ulcerans 
809]
Length=274

 Score =  248 bits (632),  Expect = 8e-64, Method: Compositional matrix adjust.
 Identities = 134/259 (52%), Positives = 176/259 (68%), Gaps = 3/259 (1%)

Query  2    LTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRH-ELL  60
             +ER+ RV  A KL R  GR++A RFLAEG N V AA++ G   +VFVTE AA+R  +++
Sbjct  13   FSERTPRVVNAAKLLRAAGRKKADRFLAEGENSVEAAVSTGAATDVFVTEKAAQRFVDVI  72

Query  61   LAAHE--ASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIRE  118
             AA    A VH +++RAAK+LSDTVT  G+ AVC      ++  L G P+L+ V V   E
Sbjct  73   TAAKHMGAYVHPISDRAAKSLSDTVTTTGIFAVCRPVLWDIKSALKGQPRLVCVAVGTSE  132

Query  119  PGNAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLR  178
            PGNAGT+IR+ADAMGA  ++ AG +VDP   K +R+S GS+F IPVV  P++      L+
Sbjct  133  PGNAGTLIRVADAMGADCIVFAGDTVDPQGPKAVRSSAGSLFHIPVVREPNMQRVWDSLK  192

Query  179  AAGLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAE  238
            A GL +LAT   GE++LD+    L+ PTAWL G EAHGL AE+   ADHRV I + G AE
Sbjct  193  ARGLMILATTAQGEVSLDNPGETLSSPTAWLMGNEAHGLDAELMQKADHRVSIPIRGRAE  252

Query  239  SLNVAAAAAICLYESARAL  257
            SLN+A AA+ICLYES++AL
Sbjct  253  SLNLATAASICLYESSKAL  271


>gi|25028075|ref|NP_738129.1| putative tRNA/rRNA methyltransferase [Corynebacterium efficiens 
YS-314]
 gi|23493359|dbj|BAC18329.1| putative tRNA/rRNA methyltransferase [Corynebacterium efficiens 
YS-314]
Length=282

 Score =  248 bits (632),  Expect = 8e-64, Method: Compositional matrix adjust.
 Identities = 131/259 (51%), Positives = 175/259 (68%), Gaps = 3/259 (1%)

Query  2    LTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELLL  61
             TER+ R+  A KL +   R++  +FLAEG N V AA+A G   ++FVTE AA + E ++
Sbjct  19   FTERTPRIVNAAKLLKTAQRKKTHQFLAEGENSVEAAIATGAATDLFVTEQAAEKFEEIV  78

Query  62   ---AAHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIRE  118
                      H +T+RAAK+LSDTVT  G+ A+C+     +   +    +L++V VE RE
Sbjct  79   RTAGYMNVYTHPITDRAAKSLSDTVTTTGIFALCNDVLWTVGKAVNSRSRLVSVPVETRE  138

Query  119  PGNAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLR  178
            PGNAGT+IR+ADA+GA AV+ AG +VDP   K +RAS GS+F +PV    ++   +  LR
Sbjct  139  PGNAGTLIRVADAVGADAVVFAGETVDPQGPKVVRASAGSLFHVPVARNVNIDDVLGQLR  198

Query  179  AAGLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAE  238
            + GLQ+LATA DGE+ LDDA  LL+ PTAWLFG EAHGL  E+ A ADHRV I + G AE
Sbjct  199  SQGLQILATAADGEVDLDDAGELLSRPTAWLFGNEAHGLGEELLAKADHRVRIPIRGRAE  258

Query  239  SLNVAAAAAICLYESARAL  257
            SLN+A AA+ICLYES++AL
Sbjct  259  SLNLATAASICLYESSKAL  277


>gi|259505627|ref|ZP_05748529.1| rRNA methylase [Corynebacterium efficiens YS-314]
 gi|259166792|gb|EEW51346.1| rRNA methylase [Corynebacterium efficiens YS-314]
Length=272

 Score =  248 bits (632),  Expect = 9e-64, Method: Compositional matrix adjust.
 Identities = 131/259 (51%), Positives = 175/259 (68%), Gaps = 3/259 (1%)

Query  2    LTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELLL  61
             TER+ R+  A KL +   R++  +FLAEG N V AA+A G   ++FVTE AA + E ++
Sbjct  9    FTERTPRIVNAAKLLKTAQRKKTHQFLAEGENSVEAAIATGAATDLFVTEQAAEKFEEIV  68

Query  62   ---AAHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIRE  118
                      H +T+RAAK+LSDTVT  G+ A+C+     +   +    +L++V VE RE
Sbjct  69   RTAGYMNVYTHPITDRAAKSLSDTVTTTGIFALCNDVLWTVGKAVNSRSRLVSVPVETRE  128

Query  119  PGNAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLR  178
            PGNAGT+IR+ADA+GA AV+ AG +VDP   K +RAS GS+F +PV    ++   +  LR
Sbjct  129  PGNAGTLIRVADAVGADAVVFAGETVDPQGPKVVRASAGSLFHVPVARNVNIDDVLGQLR  188

Query  179  AAGLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAE  238
            + GLQ+LATA DGE+ LDDA  LL+ PTAWLFG EAHGL  E+ A ADHRV I + G AE
Sbjct  189  SQGLQILATAADGEVDLDDAGELLSRPTAWLFGNEAHGLGEELLAKADHRVRIPIRGRAE  248

Query  239  SLNVAAAAAICLYESARAL  257
            SLN+A AA+ICLYES++AL
Sbjct  249  SLNLATAASICLYESSKAL  267


>gi|68535913|ref|YP_250618.1| putative rRNA methylase [Corynebacterium jeikeium K411]
 gi|68263512|emb|CAI37000.1| putative rRNA methylase [Corynebacterium jeikeium K411]
Length=285

 Score =  248 bits (632),  Expect = 9e-64, Method: Compositional matrix adjust.
 Identities = 132/258 (52%), Positives = 172/258 (67%), Gaps = 3/258 (1%)

Query  1    VLTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELL  60
            + TER+ R+  A KLHR   R++AG FL EG N V AA+A G   +V+VT  AA R E +
Sbjct  13   LFTERTPRIVNAAKLHRAAARKKAGVFLVEGENSVEAAIATGSATDVYVTLAAAERFEPI  72

Query  61   L---AAHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIR  117
            +         VH +T++AAK LSDT T  GL AVC      +  VL   P+L++V VE  
Sbjct  73   IRTAGYLNIYVHYITDKAAKHLSDTATTTGLFAVCKPVLWSVGKVLTPQPRLVSVPVETN  132

Query  118  EPGNAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADL  177
            +PGNAGT+IR+ADAMGA AV+  G + DP + K  RAS GS+F +PV  + +V   +  L
Sbjct  133  DPGNAGTLIRVADAMGADAVVFVGETADPQSCKAARASAGSLFHVPVARSTNVKDVLGQL  192

Query  178  RAAGLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGA  237
            RA G+Q+LATA DGE++LDDA  +L +PTAWLFG EAHGL  E+ A AD RV I + G A
Sbjct  193  RAQGMQILATAADGEVSLDDAGEILTKPTAWLFGNEAHGLGEELLAEADLRVSIPIRGRA  252

Query  238  ESLNVAAAAAICLYESAR  255
            ESLN+A AA+IC+YES+R
Sbjct  253  ESLNLATAASICMYESSR  270


>gi|337290627|ref|YP_004629648.1| hypothetical protein CULC22_01016 [Corynebacterium ulcerans BR-AD22]
 gi|334698933|gb|AEG83729.1| hypothetical protein CULC22_01016 [Corynebacterium ulcerans BR-AD22]
Length=274

 Score =  246 bits (628),  Expect = 3e-63, Method: Compositional matrix adjust.
 Identities = 133/259 (52%), Positives = 175/259 (68%), Gaps = 3/259 (1%)

Query  2    LTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRH-ELL  60
             +ER+ RV  A KL R  GR++A RFLAEG N V AA++ G   +VFVTE AA+R  +++
Sbjct  13   FSERTPRVVNAAKLLRAAGRKKADRFLAEGENSVEAAVSTGAATDVFVTEKAAQRFVDVI  72

Query  61   LAAHEASV--HLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIRE  118
             AA    V  H +++RAAK+LSDTVT  G+ AVC      ++  L G P+L+ V V   E
Sbjct  73   TAAKHMGVYVHPISDRAAKSLSDTVTTTGIFAVCRPVLWDIKSALKGQPRLVCVAVGTSE  132

Query  119  PGNAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLR  178
            PGNAGT+IR+ADAMGA  ++ AG +VDP   K +R+S GS+F IPVV  P++      L+
Sbjct  133  PGNAGTLIRVADAMGADCIVFAGDTVDPQGPKAVRSSAGSLFHIPVVREPNMQRVWDSLK  192

Query  179  AAGLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAE  238
            A GL +LAT   GE++LD+    L+ PTAWL G EAHGL AE+   ADHRV I + G AE
Sbjct  193  ARGLTILATTAQGEVSLDNPGETLSSPTAWLMGNEAHGLDAELMQKADHRVSIPIRGRAE  252

Query  239  SLNVAAAAAICLYESARAL  257
            SLN+A AA+ICLYES++AL
Sbjct  253  SLNLATAASICLYESSKAL  271


>gi|38233754|ref|NP_939521.1| putative rRNA methyltransferase [Corynebacterium diphtheriae 
NCTC 13129]
 gi|38200015|emb|CAE49684.1| Putative rRNA methyltransferase [Corynebacterium diphtheriae]
Length=272

 Score =  246 bits (628),  Expect = 3e-63, Method: Compositional matrix adjust.
 Identities = 137/263 (53%), Positives = 175/263 (67%), Gaps = 5/263 (1%)

Query  2    LTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELLL  61
             TER+ RV  A KL R  GR++  RFLAEG N V AA+A G   ++FVTE AA R E ++
Sbjct  9    FTERTPRVVNAAKLLRSAGRKKVDRFLAEGENSVEAAVATGAATDLFVTEKAAERFEAIV  68

Query  62   AA---HEASVHLVTERAAKALSDTVTPAGLVAVCDLPA-TRLEDVLAGSPQLIAVTVEIR  117
             A       VH +T+RAAK+LSDT+T  G+ AVC LP      + L G+P L+ V VE  
Sbjct  69   TAAGHMGVFVHPITDRAAKSLSDTMTTTGIFAVC-LPVLWSAREALKGNPSLVCVAVETG  127

Query  118  EPGNAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADL  177
            EPGNAGT++R+ADAMGA  VI AG +VDP + K +RAS GS+F IPVV  PD+      L
Sbjct  128  EPGNAGTLVRVADAMGADCVIFAGTTVDPQSPKAVRASAGSLFHIPVVREPDMQKVWQIL  187

Query  178  RAAGLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGA  237
            RA  +Q+LATA  GE+ LD A  LL +PTAWL G EAHGL+ E  + ADH V I + G A
Sbjct  188  RARNVQMLATAAQGEINLDTAGELLEKPTAWLMGNEAHGLNDEALSAADHSVRIPIRGRA  247

Query  238  ESLNVAAAAAICLYESARALGRR  260
            ESLN+A AA+IC+YES+++   +
Sbjct  248  ESLNLATAASICMYESSKSQAHK  270


>gi|300858366|ref|YP_003783349.1| hypothetical protein cpfrc_00948 [Corynebacterium pseudotuberculosis 
FRC41]
 gi|300685820|gb|ADK28742.1| hypothetical protein cpfrc_00948 [Corynebacterium pseudotuberculosis 
FRC41]
 gi|302330634|gb|ADL20828.1| rRNA methyltransferase [Corynebacterium pseudotuberculosis 1002]
 gi|308276319|gb|ADO26218.1| putative rRNA methyltransferase [Corynebacterium pseudotuberculosis 
I19]
 gi|341824754|gb|AEK92275.1| rRNA methyltransferase [Corynebacterium pseudotuberculosis PAT10]
Length=285

 Score =  246 bits (627),  Expect = 3e-63, Method: Compositional matrix adjust.
 Identities = 131/259 (51%), Positives = 175/259 (68%), Gaps = 3/259 (1%)

Query  2    LTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRH-ELL  60
             +ER+ RV  A KL R  GR++A RFLAEG N V AA++ G   +VFVTE AA++  +++
Sbjct  20   FSERTPRVINAAKLLRTAGRKKADRFLAEGENSVEAAVSTGAATDVFVTETAAQKFVDVI  79

Query  61   LAAHEAS--VHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIRE  118
             AA      VH +T+RAAK+LSDTV   G+ AVC      ++  L G P+L+ V VE  E
Sbjct  80   TAAKHMGIYVHPITDRAAKSLSDTVNTTGIFAVCRPVLWDIKSALKGQPRLVCVPVETSE  139

Query  119  PGNAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLR  178
            PGNAGT+IR+ADAMGA  +I AG +VDP   K +R+S GS+F IPVV  P++      L+
Sbjct  140  PGNAGTLIRVADAMGADCIIFAGNTVDPQGPKAVRSSAGSLFHIPVVREPNLQRVWDSLK  199

Query  179  AAGLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAE  238
            A GL++LAT   GE++LD+A  +L+ PTAWL G EAHGL   +   ADHRV I + G AE
Sbjct  200  ARGLKILATTAQGEISLDNAGDVLSHPTAWLMGNEAHGLEESLMEKADHRVCIPIRGRAE  259

Query  239  SLNVAAAAAICLYESARAL  257
            SLN+A AA++CLYES++ L
Sbjct  260  SLNLATAASVCLYESSKTL  278


>gi|302206081|gb|ADL10423.1| rRNA methyltransferase [Corynebacterium pseudotuberculosis C231]
Length=289

 Score =  246 bits (627),  Expect = 3e-63, Method: Compositional matrix adjust.
 Identities = 131/259 (51%), Positives = 175/259 (68%), Gaps = 3/259 (1%)

Query  2    LTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRH-ELL  60
             +ER+ RV  A KL R  GR++A RFLAEG N V AA++ G   +VFVTE AA++  +++
Sbjct  24   FSERTPRVINAAKLLRTAGRKKADRFLAEGENSVEAAVSTGAATDVFVTETAAQKFVDVI  83

Query  61   LAAHEAS--VHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIRE  118
             AA      VH +T+RAAK+LSDTV   G+ AVC      ++  L G P+L+ V VE  E
Sbjct  84   TAAKHMGIYVHPITDRAAKSLSDTVNTTGIFAVCRPVLWDIKSALKGQPRLVCVPVETSE  143

Query  119  PGNAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLR  178
            PGNAGT+IR+ADAMGA  +I AG +VDP   K +R+S GS+F IPVV  P++      L+
Sbjct  144  PGNAGTLIRVADAMGADCIIFAGNTVDPQGPKAVRSSAGSLFHIPVVREPNLQRVWDSLK  203

Query  179  AAGLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAE  238
            A GL++LAT   GE++LD+A  +L+ PTAWL G EAHGL   +   ADHRV I + G AE
Sbjct  204  ARGLKILATTAQGEISLDNAGDVLSHPTAWLMGNEAHGLEESLMEKADHRVCIPIRGRAE  263

Query  239  SLNVAAAAAICLYESARAL  257
            SLN+A AA++CLYES++ L
Sbjct  264  SLNLATAASVCLYESSKTL  282


>gi|172040800|ref|YP_001800514.1| putative rRNA methylase [Corynebacterium urealyticum DSM 7109]
 gi|171852104|emb|CAQ05080.1| putative rRNA methylase [Corynebacterium urealyticum DSM 7109]
Length=269

 Score =  242 bits (617),  Expect = 5e-62, Method: Compositional matrix adjust.
 Identities = 139/267 (53%), Positives = 172/267 (65%), Gaps = 16/267 (5%)

Query  1    VLTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRHELL  60
            + TER+ R+  A KLHR   RR+ GRFLAEG N V AALARG V +++VTE A  R   L
Sbjct  3    MFTERTPRIVNAAKLHRAATRRKTGRFLAEGENAVTAALARGEVLDLYVTEAAWERFPFL  62

Query  61   LAAHEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLED-------VLAGSPQLIAVT  113
                   VHL+TERAA  LS+TVT  GL A+C   A ++ D        +  SP LIAV 
Sbjct  63   QDVTSTHVHLITERAADHLSETVTHTGLFALC---ANQMVDDDALIASAVKNSP-LIAVP  118

Query  114  VEIREPGNAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAA  173
            VE  EPGNAGT+IR+ADA GA  V+ AG +VDP  GK +RAS GS+F +PV     V   
Sbjct  119  VETNEPGNAGTIIRVADAFGAGGVLFAGNTVDPQGGKAVRASAGSLFNLPVARNTSVVEV  178

Query  174  IADLRAAGLQVLATAVDGEMAL----DDADRLLAEPTAWLFGPEAHGLSAEIAALADHRV  229
            +  L  A  Q+LATA DG++ L    D A+ +LA+PTAWLFG EAHGL  +   LAD RV
Sbjct  179  VEKLHEAEFQILATAADGDVNLHEAADPANGMLAQPTAWLFGNEAHGL-GDWLDLADIRV  237

Query  230  HILMSGGAESLNVAAAAAICLYESARA  256
             I M G AESLN+A AA++CLYES++A
Sbjct  238  SIPMQGQAESLNLATAASVCLYESSKA  264


>gi|305681831|ref|ZP_07404635.1| RNA methyltransferase, TrmH family [Corynebacterium matruchotii 
ATCC 14266]
 gi|305658304|gb|EFM47807.1| RNA methyltransferase, TrmH family [Corynebacterium matruchotii 
ATCC 14266]
Length=266

 Score =  241 bits (614),  Expect = 1e-61, Method: Compositional matrix adjust.
 Identities = 130/257 (51%), Positives = 177/257 (69%), Gaps = 3/257 (1%)

Query  2    LTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRH-ELL  60
             TER+ R+  A KLHR   RR+ GRF+ EG N V AA+A G   +VF+T  AA+R  +++
Sbjct  10   FTERTPRIVKAAKLHRTAVRRKEGRFIVEGSNSVEAAVATGSATDVFITAEAAKRFADIV  69

Query  61   LAA--HEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIRE  118
            +AA   +  VH +T  AA++L+DT T  G+ AVC     R+ + L  SP+L+ V V   +
Sbjct  70   VAAGHMQVFVHPITTGAARSLADTATAPGIFAVCRPVLWRVGEALGRSPRLVTVAVGTND  129

Query  119  PGNAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLR  178
            PGNAGT++R++DA+GA AVI AG +VDP + K +RAS GS+F +PV  + DVG  +  L+
Sbjct  130  PGNAGTLVRVSDALGADAVIFAGDTVDPQSSKAVRASAGSVFHVPVARSRDVGEVLRLLK  189

Query  179  AAGLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAE  238
              GLQ++ATA DGE+ L  A+ LLA PTAWLFG EAHGL  E+  LADHRV I + G AE
Sbjct  190  GRGLQLMATAADGEVDLGTANELLARPTAWLFGNEAHGLGPELMELADHRVAIPIKGSAE  249

Query  239  SLNVAAAAAICLYESAR  255
            SLN+A AA+ICL+ES++
Sbjct  250  SLNLATAASICLWESSK  266


>gi|225022603|ref|ZP_03711795.1| hypothetical protein CORMATOL_02645 [Corynebacterium matruchotii 
ATCC 33806]
 gi|224944511|gb|EEG25720.1| hypothetical protein CORMATOL_02645 [Corynebacterium matruchotii 
ATCC 33806]
Length=266

 Score =  240 bits (613),  Expect = 1e-61, Method: Compositional matrix adjust.
 Identities = 130/257 (51%), Positives = 177/257 (69%), Gaps = 3/257 (1%)

Query  2    LTERSARVATAVKLHRHVGRRRAGRFLAEGPNLVAAALARGLVREVFVTEVAARRH-ELL  60
             TER+ R+  A KLHR   RR+ GRF+ EG N V AA+A G   +VF+T  AA+R  +++
Sbjct  10   FTERTPRIVKAAKLHRTAVRRKEGRFIVEGSNSVEAAVATGSATDVFITAEAAKRFADIV  69

Query  61   LAA--HEASVHLVTERAAKALSDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIRE  118
            +AA   +  VH +T  AA++L+DT T  G+ AVC     R+ + L  SP+L+ V V   +
Sbjct  70   VAAGHMQVFVHPITAGAARSLADTATAPGIFAVCRPVLWRVGEALGRSPRLVTVAVGTND  129

Query  119  PGNAGTVIRIADAMGAAAVILAGRSVDPYNGKCLRASTGSIFAIPVVVAPDVGAAIADLR  178
            PGNAGT++R++DA+GA AVI AG +VDP + K +RAS GS+F +PV  + DVG  +  L+
Sbjct  130  PGNAGTLVRVSDALGADAVIFAGDTVDPQSSKAVRASAGSVFHVPVARSRDVGEVLRLLK  189

Query  179  AAGLQVLATAVDGEMALDDADRLLAEPTAWLFGPEAHGLSAEIAALADHRVHILMSGGAE  238
              GLQ++ATA DGE+ L  A+ LLA PTAWLFG EAHGL  E+  LADHRV I + G AE
Sbjct  190  GRGLQLMATAADGEVDLGTANELLARPTAWLFGNEAHGLGPELMELADHRVAIPIKGSAE  249

Query  239  SLNVAAAAAICLYESAR  255
            SLN+A AA+ICL+ES++
Sbjct  250  SLNLATAASICLWESSK  266



Lambda     K      H
   0.321    0.133    0.372 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 385409777106


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40