BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1646
Length=310
Score E
Sequences producing significant alignments: (Bits) Value
gi|15841102|ref|NP_336139.1| PE family protein [Mycobacterium tu... 581 6e-164
gi|298525144|ref|ZP_07012553.1| pe family protein [Mycobacterium... 541 5e-152
gi|183982467|ref|YP_001850758.1| PE family protein [Mycobacteriu... 285 8e-75
gi|118617271|ref|YP_905603.1| PE family protein [Mycobacterium u... 280 2e-73
gi|240168031|ref|ZP_04746690.1| PE family protein [Mycobacterium... 158 8e-37
gi|254550114|ref|ZP_05140561.1| hypothetical protein Mtube_06599... 130 3e-28
gi|240169291|ref|ZP_04747950.1| PE family protein [Mycobacterium... 128 1e-27
gi|183982975|ref|YP_001851266.1| PE-PGRS family protein [Mycobac... 125 7e-27
gi|183981460|ref|YP_001849751.1| PE-PGRS family protein [Mycobac... 113 4e-23
gi|183982472|ref|YP_001850763.1| PE-PGRS family protein [Mycobac... 113 4e-23
gi|289745436|ref|ZP_06504814.1| predicted protein [Mycobacterium... 105 8e-21
gi|340627170|ref|YP_004745622.1| PE-PGRS family protein [Mycobac... 102 7e-20
gi|339632193|ref|YP_004723835.1| PE-PGRS family protein [Mycobac... 102 8e-20
gi|253798773|ref|YP_003031774.1| PE-PGRS family protein [Mycobac... 102 8e-20
gi|15841654|ref|NP_336691.1| PE_PGRS family protein [Mycobacteri... 102 8e-20
gi|297634751|ref|ZP_06952531.1| PE-PGRS family protein [Mycobact... 102 8e-20
gi|339298700|gb|AEJ50810.1| PE-PGRS family protein [Mycobacteriu... 102 9e-20
gi|306793630|ref|ZP_07431932.1| putative PE family protein [Myco... 102 9e-20
gi|289574848|ref|ZP_06455075.1| PE-PGRS family protein [Mycobact... 102 9e-20
gi|289554051|ref|ZP_06443261.1| predicted protein [Mycobacterium... 102 9e-20
gi|254551200|ref|ZP_05141647.1| PE-PGRS family protein [Mycobact... 102 9e-20
gi|323719259|gb|EGB28403.1| PE-PGRS family protein [Mycobacteriu... 102 9e-20
gi|313659076|ref|ZP_07815956.1| PE-PGRS family protein [Mycobact... 102 9e-20
gi|289443669|ref|ZP_06433413.1| PE-PGRS family protein [Mycobact... 102 9e-20
gi|31793342|ref|NP_855835.1| hypothetical protein Mb2186c [Mycob... 102 9e-20
gi|306784937|ref|ZP_07423259.1| hypothetical protein TMCG_00258 ... 102 1e-19
gi|297731742|ref|ZP_06960860.1| PE-PGRS family protein [Mycobact... 102 1e-19
gi|307084818|ref|ZP_07493931.1| putative PE family protein [Myco... 102 1e-19
gi|307080232|ref|ZP_07489402.1| putative PE family protein [Myco... 102 1e-19
gi|306968298|ref|ZP_07480959.1| putative PE family protein [Myco... 102 1e-19
gi|289447790|ref|ZP_06437534.1| PE-PGRS family protein [Mycobact... 101 1e-19
gi|306972525|ref|ZP_07485186.1| putative PE family protein [Myco... 101 1e-19
gi|306798021|ref|ZP_07436323.1| putative PE family protein [Myco... 101 1e-19
gi|306780190|ref|ZP_07418527.1| hypothetical protein TMBG_00710 ... 101 1e-19
gi|183982507|ref|YP_001850798.1| PE-PGRS family protein, PE_PGRS... 101 1e-19
gi|306808472|ref|ZP_07445140.1| putative PE family protein [Myco... 101 1e-19
gi|306789304|ref|ZP_07427626.1| putative PE family protein [Myco... 101 2e-19
gi|306803901|ref|ZP_07440569.1| putative PE family protein [Myco... 101 2e-19
gi|306776413|ref|ZP_07414750.1| hypothetical protein TMAG_00351 ... 100 2e-19
gi|240170011|ref|ZP_04748670.1| PE-PGRS family protein [Mycobact... 98.6 1e-18
gi|121639427|ref|YP_979651.1| PE-PGRS family protein [Mycobacter... 95.1 1e-17
gi|224991923|ref|YP_002646612.1| PE-PGRS family protein [Mycobac... 95.1 1e-17
gi|341603448|emb|CCC66129.1| PE-PGRS family protein [Mycobacteri... 95.1 1e-17
gi|297733265|ref|ZP_06962383.1| PE-PGRS family protein [Mycobact... 94.4 2e-17
gi|254234165|ref|ZP_04927489.1| PE-PGRS family protein [Mycobact... 94.4 2e-17
gi|254552706|ref|ZP_05143153.1| PE-PGRS family protein [Mycobact... 94.0 3e-17
gi|306795977|ref|ZP_07434279.1| putative PE family protein [Myco... 94.0 3e-17
gi|323717704|gb|EGB26904.1| PE-PGRS family protein [Mycobacteriu... 93.6 3e-17
gi|306801223|ref|ZP_07437891.1| putative PE family protein [Myco... 93.6 3e-17
gi|306791192|ref|ZP_07429494.1| putative PE family protein [Myco... 93.6 3e-17
>gi|15841102|ref|NP_336139.1| PE family protein [Mycobacterium tuberculosis CDC1551]
gi|31792833|ref|NP_855326.1| PE family protein [Mycobacterium bovis AF2122/97]
gi|57116896|ref|YP_177825.1| PE family protein [Mycobacterium tuberculosis H37Rv]
69 more sequence titles
Length=310
Score = 581 bits (1497), Expect = 6e-164, Method: Compositional matrix adjust.
Identities = 310/310 (100%), Positives = 310/310 (100%), Gaps = 0/310 (0%)
Query 1 MSFLTVAPDMVTAAAGNLESVGSALNEAAAAAAPATVGLAAPAADRVSAVVAAMLGAYAR 60
MSFLTVAPDMVTAAAGNLESVGSALNEAAAAAAPATVGLAAPAADRVSAVVAAMLGAYAR
Sbjct 1 MSFLTVAPDMVTAAAGNLESVGSALNEAAAAAAPATVGLAAPAADRVSAVVAAMLGAYAR 60
Query 61 DFQGISAQIAGFHNQFVGALRGGAAAYASAEAANVQQTVVNAVNAPAQALLGHPLIGPET 120
DFQGISAQIAGFHNQFVGALRGGAAAYASAEAANVQQTVVNAVNAPAQALLGHPLIGPET
Sbjct 61 DFQGISAQIAGFHNQFVGALRGGAAAYASAEAANVQQTVVNAVNAPAQALLGHPLIGPET 120
Query 121 VGSSAAAVSFGFGPLLLAGSDPLLAVPFSYPASLPTPFGPVTMTLNGSFDPLTQQVVFDS 180
VGSSAAAVSFGFGPLLLAGSDPLLAVPFSYPASLPTPFGPVTMTLNGSFDPLTQQVVFDS
Sbjct 121 VGSSAAAVSFGFGPLLLAGSDPLLAVPFSYPASLPTPFGPVTMTLNGSFDPLTQQVVFDS 180
Query 181 GSLTAPAPFVYGLGAVGPALTTMTALQNSGTAFSGAVQSGNLLGAAGALLQAPGNAVTGF 240
GSLTAPAPFVYGLGAVGPALTTMTALQNSGTAFSGAVQSGNLLGAAGALLQAPGNAVTGF
Sbjct 181 GSLTAPAPFVYGLGAVGPALTTMTALQNSGTAFSGAVQSGNLLGAAGALLQAPGNAVTGF 240
Query 241 LFGQTAISQSIPGPSNLGYESVGISVPVGGLLAPLQPVTVTLTPTSGMPTAIQLSGTQFG 300
LFGQTAISQSIPGPSNLGYESVGISVPVGGLLAPLQPVTVTLTPTSGMPTAIQLSGTQFG
Sbjct 241 LFGQTAISQSIPGPSNLGYESVGISVPVGGLLAPLQPVTVTLTPTSGMPTAIQLSGTQFG 300
Query 301 GLLPALLNGF 310
GLLPALLNGF
Sbjct 301 GLLPALLNGF 310
>gi|298525144|ref|ZP_07012553.1| pe family protein [Mycobacterium tuberculosis 94_M4241A]
gi|298494938|gb|EFI30232.1| pe family protein [Mycobacterium tuberculosis 94_M4241A]
Length=309
Score = 541 bits (1394), Expect = 5e-152, Method: Compositional matrix adjust.
Identities = 309/310 (99%), Positives = 309/310 (99%), Gaps = 1/310 (0%)
Query 1 MSFLTVAPDMVTAAAGNLESVGSALNEAAAAAAPATVGLAAPAADRVSAVVAAMLGAYAR 60
MSFLTVAPDMVTAAAGNLESVGSALNEAAAAAAPATVGLAAPAADRVSAVVAAMLGAYAR
Sbjct 1 MSFLTVAPDMVTAAAGNLESVGSALNEAAAAAAPATVGLAAPAADRVSAVVAAMLGAYAR 60
Query 61 DFQGISAQIAGFHNQFVGALRGGAAAYASAEAANVQQTVVNAVNAPAQALLGHPLIGPET 120
DFQGISAQIAGFHNQFVGALRGGAAAYASAEAANVQQTVVNAVNAPAQALLGHPLIGPET
Sbjct 61 DFQGISAQIAGFHNQFVGALRGGAAAYASAEAANVQQTVVNAVNAPAQALLGHPLIGPET 120
Query 121 VGSSAAAVSFGFGPLLLAGSDPLLAVPFSYPASLPTPFGPVTMTLNGSFDPLTQQVVFDS 180
VGSSAAAVSFGFGPLLLAGSDPLLAVPFSYPASLP PFGPVTMTLNGSFDPLTQQVVFDS
Sbjct 121 VGSSAAAVSFGFGPLLLAGSDPLLAVPFSYPASLP-PFGPVTMTLNGSFDPLTQQVVFDS 179
Query 181 GSLTAPAPFVYGLGAVGPALTTMTALQNSGTAFSGAVQSGNLLGAAGALLQAPGNAVTGF 240
GSLTAPAPFVYGLGAVGPALTTMTALQNSGTAFSGAVQSGNLLGAAGALLQAPGNAVTGF
Sbjct 180 GSLTAPAPFVYGLGAVGPALTTMTALQNSGTAFSGAVQSGNLLGAAGALLQAPGNAVTGF 239
Query 241 LFGQTAISQSIPGPSNLGYESVGISVPVGGLLAPLQPVTVTLTPTSGMPTAIQLSGTQFG 300
LFGQTAISQSIPGPSNLGYESVGISVPVGGLLAPLQPVTVTLTPTSGMPTAIQLSGTQFG
Sbjct 240 LFGQTAISQSIPGPSNLGYESVGISVPVGGLLAPLQPVTVTLTPTSGMPTAIQLSGTQFG 299
Query 301 GLLPALLNGF 310
GLLPALLNGF
Sbjct 300 GLLPALLNGF 309
>gi|183982467|ref|YP_001850758.1| PE family protein [Mycobacterium marinum M]
gi|183175793|gb|ACC40903.1| PE family protein [Mycobacterium marinum M]
Length=313
Score = 285 bits (728), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 187/318 (59%), Positives = 215/318 (68%), Gaps = 17/318 (5%)
Query 1 MSFLTVAPDMVTAAAGNLESVGSALNEAAAAAAPATVGLAAPAADRVSAVVAAMLGAYAR 60
MSFL VAP+MV AAA N+ES+GSAL A AAAA T+ L APAAD VS V A G+ A
Sbjct 1 MSFLNVAPEMVAAAADNVESIGSALTAAQAAAAAPTIELVAPAADGVSIAVTAAFGSAAE 60
Query 61 DFQGISAQIAGFHNQFVGALRGGAAAYASAEAANVQQTVVNAVNAPAQALLGHPLIGPET 120
+FQ + AQ A FH Q V AL AAA + A +Q ++ VN PAQALLGH L+GP
Sbjct 61 EFQELGAQAAAFHEQIV-ALLNTAAAAYAGAEATAKQALLGVVNGPAQALLGHSLVGPTA 119
Query 121 V--------GSSAAAVSFGFGPLLLAGSDPLLAVPFSYPASLPTPFGPVTMTLNGSFDPL 172
G+S V G LL DPLL VPFS P S TPFGPV +TLNG+ PL
Sbjct 120 GGYTAAAADGTSGGVV----GALL---GDPLLGVPFSAPYSFDTPFGPVALTLNGTASPL 172
Query 173 TQQVVFDSGSLTAPAPFVYGLGAVGPALTTMTALQNSGTAFSGAVQSGNLLGAAGALLQA 232
+VV DSGSL P P G+ A+GPA+TT ALQ SGTAFSGAVQSG+LLGAAGALL A
Sbjct 173 -GEVVIDSGSLNVPLPLRLGVNALGPAITTAAALQASGTAFSGAVQSGDLLGAAGALLTA 231
Query 233 PGNAVTGFLFGQTAISQSIPGPSNLGYESVGISVPVGGLLAPLQPVTVTLTPTSGMPTAI 292
PG+AV GFLFGQTAISQ +P P GY SV +SVPVGGLLAP T+TLTPTSG PTAI
Sbjct 232 PGSAVNGFLFGQTAISQMVPAPDGSGYTSVDVSVPVGGLLAPTSVATLTLTPTSGAPTAI 291
Query 293 QLSGTQFGGLLPALLNGF 310
L G++FGGL+ LL+ F
Sbjct 292 LLDGSKFGGLITGLLDDF 309
>gi|118617271|ref|YP_905603.1| PE family protein [Mycobacterium ulcerans Agy99]
gi|118569381|gb|ABL04132.1| PE family protein [Mycobacterium ulcerans Agy99]
Length=313
Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 185/318 (59%), Positives = 213/318 (67%), Gaps = 17/318 (5%)
Query 1 MSFLTVAPDMVTAAAGNLESVGSALNEAAAAAAPATVGLAAPAADRVSAVVAAMLGAYAR 60
MSFL VAP+MV AAA N+ES+GSAL A AAAA T+ L APAAD VS V A + A
Sbjct 1 MSFLNVAPEMVAAAADNVESIGSALTAAQAAAAAPTIELVAPAADGVSIAVTAAFWSAAE 60
Query 61 DFQGISAQIAGFHNQFVGALRGGAAAYASAEAANVQQTVVNAVNAPAQALLGHPLIGPET 120
+FQ + AQ A FH Q V AL AAA + A +Q ++ VN PAQALLGH L+GP
Sbjct 61 EFQELGAQAAAFHEQIV-ALLNTAAAAYAGAEATAKQALLGVVNGPAQALLGHSLVGPTA 119
Query 121 V--------GSSAAAVSFGFGPLLLAGSDPLLAVPFSYPASLPTPFGPVTMTLNGSFDPL 172
G+S V G LL DPLL VPFS P S TPFGPV +TLNG+ PL
Sbjct 120 GGYTAAAADGTSGGVV----GALL---GDPLLGVPFSAPYSFDTPFGPVALTLNGTASPL 172
Query 173 TQQVVFDSGSLTAPAPFVYGLGAVGPALTTMTALQNSGTAFSGAVQSGNLLGAAGALLQA 232
+VV DSGSL P P G+ A+GPA+TT ALQ SGTAFSGAVQSG+LLGAAGALL A
Sbjct 173 -GEVVIDSGSLNVPLPLRLGVNALGPAITTAAALQASGTAFSGAVQSGDLLGAAGALLTA 231
Query 233 PGNAVTGFLFGQTAISQSIPGPSNLGYESVGISVPVGGLLAPLQPVTVTLTPTSGMPTAI 292
PG+AV GFLFGQTAISQ +P P GY SV +SVPVGGLLAP T+TLTP SG PTAI
Sbjct 232 PGSAVNGFLFGQTAISQMVPAPDGSGYTSVDVSVPVGGLLAPTSVATLTLTPASGAPTAI 291
Query 293 QLSGTQFGGLLPALLNGF 310
L G++FGGL+ LL+ F
Sbjct 292 LLDGSKFGGLITGLLDDF 309
>gi|240168031|ref|ZP_04746690.1| PE family protein [Mycobacterium kansasii ATCC 12478]
Length=399
Score = 158 bits (400), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 87/146 (60%), Positives = 99/146 (68%), Gaps = 0/146 (0%)
Query 153 SLPTPFGPVTMTLNGSFDPLTQQVVFDSGSLTAPAPFVYGLGAVGPALTTMTALQNSGTA 212
S TPFGPV +TLNG+ D T QV FDSGS+ P P G+ A+GP TALQNS A
Sbjct 239 STSTPFGPVALTLNGTVDLTTFQVAFDSGSIALPTPLALGIDALGPYYLATTALQNSAMA 298
Query 213 FSGAVQSGNLLGAAGALLQAPGNAVTGFLFGQTAISQSIPGPSNLGYESVGISVPVGGLL 272
F A+ SGN L AAG L AP NAV FLFG I+QS+ P+ LGY V SVPVGGLL
Sbjct 299 FGNAISSGNPLAAAGTLFFAPVNAVNSFLFGHETITQSMAAPAGLGYSDVAFSVPVGGLL 358
Query 273 APLQPVTVTLTPTSGMPTAIQLSGTQ 298
+PLQP T+TLTPTSG PT+I L GTQ
Sbjct 359 SPLQPFTLTLTPTSGTPTSIALGGTQ 384
Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/117 (58%), Positives = 85/117 (73%), Gaps = 0/117 (0%)
Query 1 MSFLTVAPDMVTAAAGNLESVGSALNEAAAAAAPATVGLAAPAADRVSAVVAAMLGAYAR 60
MS L V PD++ AAAGNL +GSA++ A AAAAP T GL A AAD+VSA V A +A+
Sbjct 1 MSILNVVPDVMNAAAGNLAEIGSAMSAANAAAAPPTTGLVAMAADQVSAAVTAAFATHAQ 60
Query 61 DFQGISAQIAGFHNQFVGALRGGAAAYASAEAANVQQTVVNAVNAPAQALLGHPLIG 117
D+Q +SA++A FH+QFV L GA AY AE AN +Q ++NAVN PA +LLGHPL+G
Sbjct 61 DYQALSAKMAAFHDQFVRTLSNGAGAYLGAEIANAEQNLLNAVNGPALSLLGHPLLG 117
>gi|254550114|ref|ZP_05140561.1| hypothetical protein Mtube_06599 [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
Length=118
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/111 (64%), Positives = 82/111 (74%), Gaps = 0/111 (0%)
Query 199 ALTTMTALQNSGTAFSGAVQSGNLLGAAGALLQAPGNAVTGFLFGQTAISQSIPGPSNLG 258
AL T+ LQ+S TAF GA+ SGNLLGA GA+LQAPGNAV GFLFGQT+ISQSI G
Sbjct 3 ALGTVRGLQDSNTAFVGALHSGNLLGATGAVLQAPGNAVNGFLFGQTSISQSIDVSPEYG 62
Query 259 YESVGISVPVGGLLAPLQPVTVTLTPTSGMPTAIQLSGTQFGGLLPALLNG 309
YE V + + LLAPL+PVTVT TPT G P + LSGT+FGGL+PAL G
Sbjct 63 YELVLSATRLAELLAPLEPVTVTFTPTFGEPDMVHLSGTKFGGLVPALFEG 113
>gi|240169291|ref|ZP_04747950.1| PE family protein [Mycobacterium kansasii ATCC 12478]
Length=328
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 116/330 (36%), Positives = 173/330 (53%), Gaps = 36/330 (10%)
Query 1 MSFLTVAPDMVTAAAGNLESVGSALNEAAAAAAPATVGLAAPAADRVSAVVAAMLGAYAR 60
MSF+ + P+M+T AA +L ++ S L E + AA T LAA A D VSA +AA+ GA+ R
Sbjct 1 MSFV-LTPEMLTTAAQDLAAMHSTLGEVSVTAAGPTTALAAAAEDEVSAGIAALFGAFGR 59
Query 61 DFQGISAQIAGFHNQFVGALRGGAAAYASAEAANVQQ-TVVNAVNA-PAQALLGHPLIGP 118
++Q +S+Q FH +FV L GA+AY SAEAANV T +VN P Q L+ +
Sbjct 60 EYQIVSSQAQAFHERFVNLLNAGASAYCSAEAANVSSFTAAASVNTDPYQNLIANTTGNL 119
Query 119 ETVGSSAAAVS--------FGFGPLLLAGS------DPLLAVPFSYPASLPTPF----GP 160
+ + ++ + G+ P L++ S PLL +P T + P
Sbjct 120 QRISNTWTNKTAPSLLRAVTGY-PQLISTSLATGNPLPLLGIPVRLAQGGTTLYQAISAP 178
Query 161 VTMTLNGSFDPLTQQVVFDSGSLTAPAPFVYGLGAVGPALTTMTALQNSGTAFSGAVQSG 220
+++T + + L+ + L P + GL A+G + A S T+F GAV +G
Sbjct 179 MSLTPSLTLSGLSLE-------LNLGLPELLGLNALGAPVNAAMAAGTSATSFVGAVSTG 231
Query 221 NLLGAAGALLQAPGNAVTGFLFGQTAISQSIPGPSNLGYESVGISVPVGGLLAPLQPVTV 280
+ +GAA AL AP + V GFL G +S + P SV +VP+ GLL PL+P+T
Sbjct 232 DPVGAATALFGAPAHIVDGFLNGHQTLSTQLLLPG----LSVTANVPLNGLLGPLEPLTA 287
Query 281 TLTPTSGMP--TAIQLSGTQFGGLLPALLN 308
T T G+P + ++G+ FGGL+P LL
Sbjct 288 TAT-LPGLPLLNTLTVTGSHFGGLVPTLLE 316
>gi|183982975|ref|YP_001851266.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183176301|gb|ACC41411.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=443
Score = 125 bits (315), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 65/116 (57%), Positives = 83/116 (72%), Gaps = 0/116 (0%)
Query 1 MSFLTVAPDMVTAAAGNLESVGSALNEAAAAAAPATVGLAAPAADRVSAVVAAMLGAYAR 60
MSFLTV PDMV +A NL V S L A AAAA T G+AA A+D VS +A + G+YA+
Sbjct 1 MSFLTVLPDMVATSAENLVDVCSTLGVANAAAAVPTTGIAAAASDEVSTAIATLFGSYAQ 60
Query 61 DFQGISAQIAGFHNQFVGALRGGAAAYASAEAANVQQTVVNAVNAPAQALLGHPLI 116
++Q +SA+ A FH++FV L+G AAY SAE AN +Q ++ VNAPA+ALLGHPLI
Sbjct 61 EYQTLSARAAAFHDEFVSVLKGSGAAYLSAEVANAEQNLIKTVNAPARALLGHPLI 116
Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 41/112 (37%), Positives = 57/112 (51%), Gaps = 7/112 (6%)
Query 197 GPALTTMTALQNSGTAFSGAVQSGNLLGAAGALLQAPGNAVTGFLFGQTAISQSIPGPSN 256
GPAL+T+ S AF+ AVQSG++ GA GAL+ AP GFL G + +P
Sbjct 324 GPALSTLQGFGISLNAFTTAVQSGDIAGALGALVDAPAVLANGFLNGGVTLPLLLPIGLG 383
Query 257 LGYESVGISVPVGGLLAPLQPVTVTLTPTSGMPTAIQ-LSGTQFGGLLPALL 307
V + VP G+L + P T T T +P + +SG GG++ LL
Sbjct 384 F----VVLDVPFDGIL--VAPHATTATVTWFLPYFQEVVSGPTVGGIVSTLL 429
>gi|183981460|ref|YP_001849751.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183174786|gb|ACC39896.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=1483
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/117 (53%), Positives = 80/117 (69%), Gaps = 0/117 (0%)
Query 1 MSFLTVAPDMVTAAAGNLESVGSALNEAAAAAAPATVGLAAPAADRVSAVVAAMLGAYAR 60
MSF+ VAP+MV AA +L +GS+++ A AAA T + AAD VSA +AA+ G++AR
Sbjct 1 MSFVNVAPEMVAAAVEDLAGIGSSISAANAAAVALTTDVVPAAADEVSAAIAALFGSHAR 60
Query 61 DFQGISAQIAGFHNQFVGALRGGAAAYASAEAANVQQTVVNAVNAPAQALLGHPLIG 117
++Q ISAQ A FH + V LR GA+AY E AN QQ ++NAVN P QA LG PLIG
Sbjct 61 EYQAISAQSAAFHERLVQTLRSGASAYLGTELANAQQNLLNAVNGPTQAWLGRPLIG 117
>gi|183982472|ref|YP_001850763.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|7630282|gb|AAF65168.1|AF201682_2 PE-PGRS homolog MAG24-1 [Mycobacterium marinum]
gi|183175798|gb|ACC40908.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=638
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/132 (54%), Positives = 89/132 (68%), Gaps = 6/132 (4%)
Query 1 MSFLTVAPDMVTAAAGNLESVGSALNEAAAAAAPATVGLAAPAADRVSAVVAAMLGAYAR 60
MSF+ V P+ V AAAG+L S+ SAL+EA AAAA T + A D VS ++ + GA+ +
Sbjct 1 MSFVNVVPNTVAAAAGDLASIRSALSEATAAAAGPTTDVLAAGGDEVSTAISQLFGAHGQ 60
Query 61 DFQGISAQIAGFHNQFVGALRGGAAAYASAEAANVQ------QTVVNAVNAPAQALLGHP 114
+FQ +SAQ+ GFH+Q V +R GAAAYAS EA Q Q +VNAVNAPAQALLGHP
Sbjct 61 EFQVVSAQLRGFHDQLVRLMRAGAAAYASVEATAQQDLSMAEQGLVNAVNAPAQALLGHP 120
Query 115 LIGPETVGSSAA 126
+IG GS +A
Sbjct 121 IIGTGGSGSQSA 132
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/147 (35%), Positives = 71/147 (49%), Gaps = 7/147 (4%)
Query 161 VTMTLNGSFDPLTQQVVFDSGSLTAPAPFVYGLGAVGPALTTMTALQNSGTAFSGAVQSG 220
VT TL DP + V + T P G+ A+G + + A S TAF A QSG
Sbjct 481 VTSTLTLVVDPSSPTGVGVAIDATMGLPLALGVEALGGPVDAIDAFGTSATAFVTAAQSG 540
Query 221 NLLGAAGALLQAPGNAVTGFLFGQTAISQSIPGPSNLGYESVGISVPVGGLLAPLQPVTV 280
N+L A A+L AP G GQ+ +I LG + +++P+ G+L P P T
Sbjct 541 NVLAATAAVLDAPAVVANGLFNGQSTFPLTIDA---LGIPTT-LNLPMDGILVPAGPYTA 596
Query 281 TLTPTSGMPTAIQLSGTQFGGLLPALL 307
T+ P G+ + +GT GG+ P LL
Sbjct 597 TI-PDLGVTATV--NGTPLGGVAPGLL 620
>gi|289745436|ref|ZP_06504814.1| predicted protein [Mycobacterium tuberculosis 02_1987]
gi|289685964|gb|EFD53452.1| predicted protein [Mycobacterium tuberculosis 02_1987]
Length=207
Score = 105 bits (263), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 62/112 (56%), Positives = 89/112 (80%), Gaps = 0/112 (0%)
Query 6 VAPDMVTAAAGNLESVGSALNEAAAAAAPATVGLAAPAADRVSAVVAAMLGAYARDFQGI 65
+AP+++ AAA +L ++GS+++ A+AAAA T+G+ A AD VS ++A+ G++A+ +Q +
Sbjct 2 LAPELMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQGYQTL 61
Query 66 SAQIAGFHNQFVGALRGGAAAYASAEAANVQQTVVNAVNAPAQALLGHPLIG 117
SAQ+A +HNQFV AL GA +YASAEAANVQQT++NA+NAP Q LLG PLIG
Sbjct 62 SAQLAAYHNQFVRALNAGAGSYASAEAANVQQTLLNAINAPTQTLLGRPLIG 113
>gi|340627170|ref|YP_004745622.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
gi|340005360|emb|CCC44518.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=526
Score = 102 bits (255), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 49/82 (60%), Positives = 65/82 (80%), Gaps = 0/82 (0%)
Query 36 TVGLAAPAADRVSAVVAAMLGAYARDFQGISAQIAGFHNQFVGALRGGAAAYASAEAANV 95
T+G+ A AD VS ++A+ G++A+ +Q +SAQ+A +HNQFV AL GA +YASAEAANV
Sbjct 36 TMGILAAGADEVSVAISALFGSHAQGYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANV 95
Query 96 QQTVVNAVNAPAQALLGHPLIG 117
QQT++NA+NAP Q LLG PLIG
Sbjct 96 QQTLLNAINAPTQTLLGRPLIG 117
>gi|339632193|ref|YP_004723835.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
gi|339331549|emb|CCC27245.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
Length=526
Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 49/82 (60%), Positives = 65/82 (80%), Gaps = 0/82 (0%)
Query 36 TVGLAAPAADRVSAVVAAMLGAYARDFQGISAQIAGFHNQFVGALRGGAAAYASAEAANV 95
T+G+ A AD VS ++A+ G++A+ +Q +SAQ+A +HNQFV AL GA +YASAEAANV
Sbjct 36 TMGILAAGADEVSVAISALFGSHAQGYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANV 95
Query 96 QQTVVNAVNAPAQALLGHPLIG 117
QQT++NA+NAP Q LLG PLIG
Sbjct 96 QQTLLNAINAPTQTLLGRPLIG 117
>gi|253798773|ref|YP_003031774.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
gi|253320276|gb|ACT24879.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
gi|328458536|gb|AEB03959.1| hypothetical protein TBSG_01830 [Mycobacterium tuberculosis KZN
4207]
Length=532
Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 49/82 (60%), Positives = 65/82 (80%), Gaps = 0/82 (0%)
Query 36 TVGLAAPAADRVSAVVAAMLGAYARDFQGISAQIAGFHNQFVGALRGGAAAYASAEAANV 95
T+G+ A AD VS ++A+ G++A+ +Q +SAQ+A +HNQFV AL GA +YASAEAANV
Sbjct 36 TMGILAAGADEVSVAISALFGSHAQGYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANV 95
Query 96 QQTVVNAVNAPAQALLGHPLIG 117
QQT++NA+NAP Q LLG PLIG
Sbjct 96 QQTLLNAINAPTQTLLGRPLIG 117
>gi|15841654|ref|NP_336691.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
gi|57116953|ref|YP_177865.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv]
gi|148661978|ref|YP_001283501.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
9 more sequence titles
Length=532
Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 49/82 (60%), Positives = 65/82 (80%), Gaps = 0/82 (0%)
Query 36 TVGLAAPAADRVSAVVAAMLGAYARDFQGISAQIAGFHNQFVGALRGGAAAYASAEAANV 95
T+G+ A AD VS ++A+ G++A+ +Q +SAQ+A +HNQFV AL GA +YASAEAANV
Sbjct 36 TMGILAAGADEVSVAISALFGSHAQGYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANV 95
Query 96 QQTVVNAVNAPAQALLGHPLIG 117
QQT++NA+NAP Q LLG PLIG
Sbjct 96 QQTLLNAINAPTQTLLGRPLIG 117
>gi|297634751|ref|ZP_06952531.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207]
Length=532
Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 49/82 (60%), Positives = 65/82 (80%), Gaps = 0/82 (0%)
Query 36 TVGLAAPAADRVSAVVAAMLGAYARDFQGISAQIAGFHNQFVGALRGGAAAYASAEAANV 95
T+G+ A AD VS ++A+ G++A+ +Q +SAQ+A +HNQFV AL GA +YASAEAANV
Sbjct 36 TMGILAAGADEVSVAISALFGSHAQGYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANV 95
Query 96 QQTVVNAVNAPAQALLGHPLIG 117
QQT++NA+NAP Q LLG PLIG
Sbjct 96 QQTLLNAINAPTQTLLGRPLIG 117
>gi|339298700|gb|AEJ50810.1| PE-PGRS family protein [Mycobacterium tuberculosis CCDC5180]
Length=532
Score = 102 bits (254), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 49/82 (60%), Positives = 65/82 (80%), Gaps = 0/82 (0%)
Query 36 TVGLAAPAADRVSAVVAAMLGAYARDFQGISAQIAGFHNQFVGALRGGAAAYASAEAANV 95
T+G+ A AD VS ++A+ G++A+ +Q +SAQ+A +HNQFV AL GA +YASAEAANV
Sbjct 36 TMGILAAGADEVSVAISALFGSHAQGYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANV 95
Query 96 QQTVVNAVNAPAQALLGHPLIG 117
QQT++NA+NAP Q LLG PLIG
Sbjct 96 QQTLLNAINAPTQTLLGRPLIG 117
>gi|306793630|ref|ZP_07431932.1| putative PE family protein [Mycobacterium tuberculosis SUMu005]
gi|308337975|gb|EFP26826.1| putative PE family protein [Mycobacterium tuberculosis SUMu005]
Length=148
Score = 102 bits (254), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 49/82 (60%), Positives = 65/82 (80%), Gaps = 0/82 (0%)
Query 36 TVGLAAPAADRVSAVVAAMLGAYARDFQGISAQIAGFHNQFVGALRGGAAAYASAEAANV 95
T+G+ A AD VS ++A+ G++A+ +Q +SAQ+A +HNQFV AL GA +YASAEAANV
Sbjct 36 TMGILAAGADEVSVAISALFGSHAQGYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANV 95
Query 96 QQTVVNAVNAPAQALLGHPLIG 117
QQT++NA+NAP Q LLG PLIG
Sbjct 96 QQTLLNAINAPTQTLLGRPLIG 117
>gi|289574848|ref|ZP_06455075.1| PE-PGRS family protein [Mycobacterium tuberculosis K85]
gi|289539279|gb|EFD43857.1| PE-PGRS family protein [Mycobacterium tuberculosis K85]
Length=139
Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 49/82 (60%), Positives = 65/82 (80%), Gaps = 0/82 (0%)
Query 36 TVGLAAPAADRVSAVVAAMLGAYARDFQGISAQIAGFHNQFVGALRGGAAAYASAEAANV 95
T+G+ A AD VS ++A+ G++A+ +Q +SAQ+A +HNQFV AL GA +YASAEAANV
Sbjct 36 TMGILAAGADEVSVAISALFGSHAQGYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANV 95
Query 96 QQTVVNAVNAPAQALLGHPLIG 117
QQT++NA+NAP Q LLG PLIG
Sbjct 96 QQTLLNAINAPTQTLLGRPLIG 117
>gi|289554051|ref|ZP_06443261.1| predicted protein [Mycobacterium tuberculosis KZN 605]
gi|289438683|gb|EFD21176.1| predicted protein [Mycobacterium tuberculosis KZN 605]
Length=356
Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 49/82 (60%), Positives = 65/82 (80%), Gaps = 0/82 (0%)
Query 36 TVGLAAPAADRVSAVVAAMLGAYARDFQGISAQIAGFHNQFVGALRGGAAAYASAEAANV 95
T+G+ A AD VS ++A+ G++A+ +Q +SAQ+A +HNQFV AL GA +YASAEAANV
Sbjct 36 TMGILAAGADEVSVAISALFGSHAQGYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANV 95
Query 96 QQTVVNAVNAPAQALLGHPLIG 117
QQT++NA+NAP Q LLG PLIG
Sbjct 96 QQTLLNAINAPTQTLLGRPLIG 117
>gi|254551200|ref|ZP_05141647.1| PE-PGRS family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
Length=243
Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 49/82 (60%), Positives = 65/82 (80%), Gaps = 0/82 (0%)
Query 36 TVGLAAPAADRVSAVVAAMLGAYARDFQGISAQIAGFHNQFVGALRGGAAAYASAEAANV 95
T+G+ A AD VS ++A+ G++A+ +Q +SAQ+A +HNQFV AL GA +YASAEAANV
Sbjct 36 TMGILAAGADEVSVAISALFGSHAQGYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANV 95
Query 96 QQTVVNAVNAPAQALLGHPLIG 117
QQT++NA+NAP Q LLG PLIG
Sbjct 96 QQTLLNAINAPTQTLLGRPLIG 117
>gi|323719259|gb|EGB28403.1| PE-PGRS family protein [Mycobacterium tuberculosis CDC1551A]
Length=185
Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 49/82 (60%), Positives = 65/82 (80%), Gaps = 0/82 (0%)
Query 36 TVGLAAPAADRVSAVVAAMLGAYARDFQGISAQIAGFHNQFVGALRGGAAAYASAEAANV 95
T+G+ A AD VS ++A+ G++A+ +Q +SAQ+A +HNQFV AL GA +YASAEAANV
Sbjct 36 TMGILAAGADEVSVAISALFGSHAQGYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANV 95
Query 96 QQTVVNAVNAPAQALLGHPLIG 117
QQT++NA+NAP Q LLG PLIG
Sbjct 96 QQTLLNAINAPTQTLLGRPLIG 117
>gi|313659076|ref|ZP_07815956.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN V2475]
Length=201
Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 49/82 (60%), Positives = 65/82 (80%), Gaps = 0/82 (0%)
Query 36 TVGLAAPAADRVSAVVAAMLGAYARDFQGISAQIAGFHNQFVGALRGGAAAYASAEAANV 95
T+G+ A AD VS ++A+ G++A+ +Q +SAQ+A +HNQFV AL GA +YASAEAANV
Sbjct 36 TMGILAAGADEVSVAISALFGSHAQGYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANV 95
Query 96 QQTVVNAVNAPAQALLGHPLIG 117
QQT++NA+NAP Q LLG PLIG
Sbjct 96 QQTLLNAINAPTQTLLGRPLIG 117
>gi|289443669|ref|ZP_06433413.1| PE-PGRS family protein [Mycobacterium tuberculosis T46]
gi|289416588|gb|EFD13828.1| PE-PGRS family protein [Mycobacterium tuberculosis T46]
Length=197
Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 49/82 (60%), Positives = 65/82 (80%), Gaps = 0/82 (0%)
Query 36 TVGLAAPAADRVSAVVAAMLGAYARDFQGISAQIAGFHNQFVGALRGGAAAYASAEAANV 95
T+G+ A AD VS ++A+ G++A+ +Q +SAQ+A +HNQFV AL GA +YASAEAANV
Sbjct 36 TMGILAAGADEVSVAISALFGSHAQGYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANV 95
Query 96 QQTVVNAVNAPAQALLGHPLIG 117
QQT++NA+NAP Q LLG PLIG
Sbjct 96 QQTLLNAINAPTQTLLGRPLIG 117
>gi|31793342|ref|NP_855835.1| hypothetical protein Mb2186c [Mycobacterium bovis AF2122/97]
gi|121638044|ref|YP_978268.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224990538|ref|YP_002645225.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|31618934|emb|CAD97039.1| conserved hypothetical protein, PE_PGRS [Mycobacterium bovis
AF2122/97]
gi|121493692|emb|CAL72167.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224773651|dbj|BAH26457.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|341602082|emb|CCC64756.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length=490
Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 49/82 (60%), Positives = 65/82 (80%), Gaps = 0/82 (0%)
Query 36 TVGLAAPAADRVSAVVAAMLGAYARDFQGISAQIAGFHNQFVGALRGGAAAYASAEAANV 95
T+G+ A AD VS ++A+ G++A+ +Q +SAQ+A +HNQFV AL GA +YASAEAANV
Sbjct 36 TMGILAAGADEVSVAISALFGSHAQGYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANV 95
Query 96 QQTVVNAVNAPAQALLGHPLIG 117
QQT++NA+NAP Q LLG PLIG
Sbjct 96 QQTLLNAINAPTQTLLGRPLIG 117
>gi|306784937|ref|ZP_07423259.1| hypothetical protein TMCG_00258 [Mycobacterium tuberculosis SUMu003]
gi|308330342|gb|EFP19193.1| hypothetical protein TMCG_00258 [Mycobacterium tuberculosis SUMu003]
Length=184
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/82 (60%), Positives = 65/82 (80%), Gaps = 0/82 (0%)
Query 36 TVGLAAPAADRVSAVVAAMLGAYARDFQGISAQIAGFHNQFVGALRGGAAAYASAEAANV 95
T+G+ A AD VS ++A+ G++A+ +Q +SAQ+A +HNQFV AL GA +YASAEAANV
Sbjct 36 TMGILAAGADEVSVAISALFGSHAQGYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANV 95
Query 96 QQTVVNAVNAPAQALLGHPLIG 117
QQT++NA+NAP Q LLG PLIG
Sbjct 96 QQTLLNAINAPTQTLLGRPLIG 117
>gi|297731742|ref|ZP_06960860.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN R506]
Length=207
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/82 (60%), Positives = 65/82 (80%), Gaps = 0/82 (0%)
Query 36 TVGLAAPAADRVSAVVAAMLGAYARDFQGISAQIAGFHNQFVGALRGGAAAYASAEAANV 95
T+G+ A AD VS ++A+ G++A+ +Q +SAQ+A +HNQFV AL GA +YASAEAANV
Sbjct 36 TMGILAAGADEVSVAISALFGSHAQGYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANV 95
Query 96 QQTVVNAVNAPAQALLGHPLIG 117
QQT++NA+NAP Q LLG PLIG
Sbjct 96 QQTLLNAINAPTQTLLGRPLIG 117
>gi|307084818|ref|ZP_07493931.1| putative PE family protein [Mycobacterium tuberculosis SUMu012]
gi|308365610|gb|EFP54461.1| putative PE family protein [Mycobacterium tuberculosis SUMu012]
Length=176
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/82 (60%), Positives = 65/82 (80%), Gaps = 0/82 (0%)
Query 36 TVGLAAPAADRVSAVVAAMLGAYARDFQGISAQIAGFHNQFVGALRGGAAAYASAEAANV 95
T+G+ A AD VS ++A+ G++A+ +Q +SAQ+A +HNQFV AL GA +YASAEAANV
Sbjct 36 TMGILAAGADEVSVAISALFGSHAQGYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANV 95
Query 96 QQTVVNAVNAPAQALLGHPLIG 117
QQT++NA+NAP Q LLG PLIG
Sbjct 96 QQTLLNAINAPTQTLLGRPLIG 117
>gi|307080232|ref|ZP_07489402.1| putative PE family protein [Mycobacterium tuberculosis SUMu011]
gi|308361964|gb|EFP50815.1| putative PE family protein [Mycobacterium tuberculosis SUMu011]
Length=174
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/82 (60%), Positives = 65/82 (80%), Gaps = 0/82 (0%)
Query 36 TVGLAAPAADRVSAVVAAMLGAYARDFQGISAQIAGFHNQFVGALRGGAAAYASAEAANV 95
T+G+ A AD VS ++A+ G++A+ +Q +SAQ+A +HNQFV AL GA +YASAEAANV
Sbjct 36 TMGILAAGADEVSVAISALFGSHAQGYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANV 95
Query 96 QQTVVNAVNAPAQALLGHPLIG 117
QQT++NA+NAP Q LLG PLIG
Sbjct 96 QQTLLNAINAPTQTLLGRPLIG 117
>gi|306968298|ref|ZP_07480959.1| putative PE family protein [Mycobacterium tuberculosis SUMu009]
gi|308354085|gb|EFP42936.1| putative PE family protein [Mycobacterium tuberculosis SUMu009]
Length=169
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/82 (60%), Positives = 65/82 (80%), Gaps = 0/82 (0%)
Query 36 TVGLAAPAADRVSAVVAAMLGAYARDFQGISAQIAGFHNQFVGALRGGAAAYASAEAANV 95
T+G+ A AD VS ++A+ G++A+ +Q +SAQ+A +HNQFV AL GA +YASAEAANV
Sbjct 36 TMGILAAGADEVSVAISALFGSHAQGYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANV 95
Query 96 QQTVVNAVNAPAQALLGHPLIG 117
QQT++NA+NAP Q LLG PLIG
Sbjct 96 QQTLLNAINAPTQTLLGRPLIG 117
>gi|289447790|ref|ZP_06437534.1| PE-PGRS family protein [Mycobacterium tuberculosis CPHL_A]
gi|289420748|gb|EFD17949.1| PE-PGRS family protein [Mycobacterium tuberculosis CPHL_A]
Length=621
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/82 (60%), Positives = 65/82 (80%), Gaps = 0/82 (0%)
Query 36 TVGLAAPAADRVSAVVAAMLGAYARDFQGISAQIAGFHNQFVGALRGGAAAYASAEAANV 95
T+G+ A AD VS ++A+ G++A+ +Q +SAQ+A +HNQFV AL GA +YASAEAANV
Sbjct 36 TMGILAAGADEVSVAISALFGSHAQGYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANV 95
Query 96 QQTVVNAVNAPAQALLGHPLIG 117
QQT++NA+NAP Q LLG PLIG
Sbjct 96 QQTLLNAINAPTQTLLGRPLIG 117
>gi|306972525|ref|ZP_07485186.1| putative PE family protein [Mycobacterium tuberculosis SUMu010]
gi|308358028|gb|EFP46879.1| putative PE family protein [Mycobacterium tuberculosis SUMu010]
Length=158
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/82 (60%), Positives = 65/82 (80%), Gaps = 0/82 (0%)
Query 36 TVGLAAPAADRVSAVVAAMLGAYARDFQGISAQIAGFHNQFVGALRGGAAAYASAEAANV 95
T+G+ A AD VS ++A+ G++A+ +Q +SAQ+A +HNQFV AL GA +YASAEAANV
Sbjct 36 TMGILAAGADEVSVAISALFGSHAQGYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANV 95
Query 96 QQTVVNAVNAPAQALLGHPLIG 117
QQT++NA+NAP Q LLG PLIG
Sbjct 96 QQTLLNAINAPTQTLLGRPLIG 117
>gi|306798021|ref|ZP_07436323.1| putative PE family protein [Mycobacterium tuberculosis SUMu006]
gi|308341660|gb|EFP30511.1| putative PE family protein [Mycobacterium tuberculosis SUMu006]
Length=191
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/82 (60%), Positives = 65/82 (80%), Gaps = 0/82 (0%)
Query 36 TVGLAAPAADRVSAVVAAMLGAYARDFQGISAQIAGFHNQFVGALRGGAAAYASAEAANV 95
T+G+ A AD VS ++A+ G++A+ +Q +SAQ+A +HNQFV AL GA +YASAEAANV
Sbjct 36 TMGILAAGADEVSVAISALFGSHAQGYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANV 95
Query 96 QQTVVNAVNAPAQALLGHPLIG 117
QQT++NA+NAP Q LLG PLIG
Sbjct 96 QQTLLNAINAPTQTLLGRPLIG 117
>gi|306780190|ref|ZP_07418527.1| hypothetical protein TMBG_00710 [Mycobacterium tuberculosis SUMu002]
gi|308326906|gb|EFP15757.1| hypothetical protein TMBG_00710 [Mycobacterium tuberculosis SUMu002]
Length=164
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/82 (60%), Positives = 65/82 (80%), Gaps = 0/82 (0%)
Query 36 TVGLAAPAADRVSAVVAAMLGAYARDFQGISAQIAGFHNQFVGALRGGAAAYASAEAANV 95
T+G+ A AD VS ++A+ G++A+ +Q +SAQ+A +HNQFV AL GA +YASAEAANV
Sbjct 36 TMGILAAGADEVSVAISALFGSHAQGYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANV 95
Query 96 QQTVVNAVNAPAQALLGHPLIG 117
QQT++NA+NAP Q LLG PLIG
Sbjct 96 QQTLLNAINAPTQTLLGRPLIG 117
>gi|183982507|ref|YP_001850798.1| PE-PGRS family protein, PE_PGRS15_2 [Mycobacterium marinum M]
gi|183175833|gb|ACC40943.1| PE-PGRS family protein, PE_PGRS15_2 [Mycobacterium marinum M]
Length=637
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/122 (56%), Positives = 82/122 (68%), Gaps = 2/122 (1%)
Query 1 MSFLTVAPDMVTAAAGNLESVGSALNEAAAAAAPATVGLAAPAADRVSAVVAAMLGAYAR 60
MSFL APDMV AAA +L S+GS +N A AAA+ T +AA AAD VS VA + YA+
Sbjct 1 MSFLIAAPDMVAAAATDLASIGSTINTANAAASALTTSVAAAAADEVSTAVAHVFDTYAQ 60
Query 61 DFQGISAQIAGFHNQFVGALRGGAAAYASAEAANVQ--QTVVNAVNAPAQALLGHPLIGP 118
++Q A +A FH+QFV L+ GA AY AEAAN Q ++NAVNAP QALLG PLIG
Sbjct 61 EYQTFGAHMAAFHDQFVQTLKTGALAYTGAEAANASPLQELLNAVNAPTQALLGRPLIGN 120
Query 119 ET 120
T
Sbjct 121 GT 122
>gi|306808472|ref|ZP_07445140.1| putative PE family protein [Mycobacterium tuberculosis SUMu007]
gi|308345152|gb|EFP34003.1| putative PE family protein [Mycobacterium tuberculosis SUMu007]
Length=129
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/82 (60%), Positives = 65/82 (80%), Gaps = 0/82 (0%)
Query 36 TVGLAAPAADRVSAVVAAMLGAYARDFQGISAQIAGFHNQFVGALRGGAAAYASAEAANV 95
T+G+ A AD VS ++A+ G++A+ +Q +SAQ+A +HNQFV AL GA +YASAEAANV
Sbjct 36 TMGILAAGADEVSVAISALFGSHAQGYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANV 95
Query 96 QQTVVNAVNAPAQALLGHPLIG 117
QQT++NA+NAP Q LLG PLIG
Sbjct 96 QQTLLNAINAPTQTLLGRPLIG 117
>gi|306789304|ref|ZP_07427626.1| putative PE family protein [Mycobacterium tuberculosis SUMu004]
gi|308334175|gb|EFP23026.1| putative PE family protein [Mycobacterium tuberculosis SUMu004]
Length=193
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/82 (60%), Positives = 65/82 (80%), Gaps = 0/82 (0%)
Query 36 TVGLAAPAADRVSAVVAAMLGAYARDFQGISAQIAGFHNQFVGALRGGAAAYASAEAANV 95
T+G+ A AD VS ++A+ G++A+ +Q +SAQ+A +HNQFV AL GA +YASAEAANV
Sbjct 36 TMGILAAGADEVSVAISALFGSHAQGYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANV 95
Query 96 QQTVVNAVNAPAQALLGHPLIG 117
QQT++NA+NAP Q LLG PLIG
Sbjct 96 QQTLLNAINAPTQTLLGRPLIG 117
>gi|306803901|ref|ZP_07440569.1| putative PE family protein [Mycobacterium tuberculosis SUMu008]
gi|308349454|gb|EFP38305.1| putative PE family protein [Mycobacterium tuberculosis SUMu008]
Length=194
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/82 (60%), Positives = 65/82 (80%), Gaps = 0/82 (0%)
Query 36 TVGLAAPAADRVSAVVAAMLGAYARDFQGISAQIAGFHNQFVGALRGGAAAYASAEAANV 95
T+G+ A AD VS ++A+ G++A+ +Q +SAQ+A +HNQFV AL GA +YASAEAANV
Sbjct 36 TMGILAAGADEVSVAISALFGSHAQGYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANV 95
Query 96 QQTVVNAVNAPAQALLGHPLIG 117
QQT++NA+NAP Q LLG PLIG
Sbjct 96 QQTLLNAINAPTQTLLGRPLIG 117
>gi|306776413|ref|ZP_07414750.1| hypothetical protein TMAG_00351 [Mycobacterium tuberculosis SUMu001]
gi|308215151|gb|EFO74550.1| hypothetical protein TMAG_00351 [Mycobacterium tuberculosis SUMu001]
Length=204
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/82 (60%), Positives = 65/82 (80%), Gaps = 0/82 (0%)
Query 36 TVGLAAPAADRVSAVVAAMLGAYARDFQGISAQIAGFHNQFVGALRGGAAAYASAEAANV 95
T+G+ A AD VS ++A+ G++A+ +Q +SAQ+A +HNQFV AL GA +YASAEAANV
Sbjct 36 TMGILAAGADEVSVAISALFGSHAQGYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANV 95
Query 96 QQTVVNAVNAPAQALLGHPLIG 117
QQT++NA+NAP Q LLG PLIG
Sbjct 96 QQTLLNAINAPTQTLLGRPLIG 117
>gi|240170011|ref|ZP_04748670.1| PE-PGRS family protein [Mycobacterium kansasii ATCC 12478]
Length=382
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/131 (47%), Positives = 80/131 (62%), Gaps = 3/131 (2%)
Query 1 MSFLTVAPDMVTAAAGNLESVGSALNEAAAAAAPATVGLAAPAADRVSAVVAAMLGAYAR 60
MSF+ AP+ + AA +L + S ++ A AAAA G+ A D VSA ++ + AY R
Sbjct 1 MSFVITAPETMAVAATDLADISSTISSANAAAAAPITGVVAAGTDEVSAAISGLFNAYGR 60
Query 61 DFQGISAQIAGFHNQFVGALRGGAAAYASAEAANVQQTVVNAVNAPAQALLGHPLI---G 117
+FQ +SAQ A FH + V L GGAAAY E AN +Q ++AVNAPAQ LLGHPLI G
Sbjct 61 EFQALSAQAATFHERLVSLLNGGAAAYLGTEIANAEQASISAVNAPAQTLLGHPLIPTGG 120
Query 118 PETVGSSAAAV 128
P +G A+
Sbjct 121 PSALGQGVGAM 131
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 71/140 (51%), Gaps = 12/140 (8%)
Query 172 LTQQVVFDSGSLTAPAPFVYGLGAVGPALTTMTALQNSGTAFSGAVQSGNLLGAAGALLQ 231
+ Q +V +LT P V L A+GP+L+T+ + A +GAVQ+G++ GA GAL+
Sbjct 239 IQQNLVNIGTTLTKVTPAV-ALAALGPSLSTLGGFGTAMAALTGAVQTGDVAGALGALID 297
Query 232 APGNAVTGFLFGQTAISQSIPGPSNLGYESVGISVPVGGLLAPLQPVTVTLT---PTSGM 288
AP GFL G+ + LG V + +P G+LAP +T TL P
Sbjct 298 APAFVANGFLNGEVTLPLL----LPLGLGLVVLDIPFDGILAPPHAMTGTLVWFLP---- 349
Query 289 PTAIQLSGTQFGGLLPALLN 308
P +SG G+LP L+N
Sbjct 350 PFVDDISGPPVSGILPTLMN 369
>gi|121639427|ref|YP_979651.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|121495075|emb|CAL73561.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
Length=2094
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/117 (54%), Positives = 85/117 (73%), Gaps = 0/117 (0%)
Query 1 MSFLTVAPDMVTAAAGNLESVGSALNEAAAAAAPATVGLAAPAADRVSAVVAAMLGAYAR 60
MSF+ +AP+ VTAAAG+L ++GS+++ A A+AA AT + A AD VSA +AA+ G +
Sbjct 1 MSFVLIAPEFVTAAAGDLTNLGSSISAANASAASATTQVLAAGADEVSARIAALFGGFGL 60
Query 61 DFQGISAQIAGFHNQFVGALRGGAAAYASAEAANVQQTVVNAVNAPAQALLGHPLIG 117
++Q ISAQ+A +H +FV AL GA AYASAEA +Q V+ +NAP QALLG PLIG
Sbjct 61 EYQAISAQVAAYHQRFVQALSTGAGAYASAEATAAEQIVLGVINAPTQALLGRPLIG 117
>gi|224991923|ref|YP_002646612.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|224775038|dbj|BAH27844.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
Length=2050
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/117 (54%), Positives = 85/117 (73%), Gaps = 0/117 (0%)
Query 1 MSFLTVAPDMVTAAAGNLESVGSALNEAAAAAAPATVGLAAPAADRVSAVVAAMLGAYAR 60
MSF+ +AP+ VTAAAG+L ++GS+++ A A+AA AT + A AD VSA +AA+ G +
Sbjct 1 MSFVLIAPEFVTAAAGDLTNLGSSISAANASAASATTQVLAAGADEVSARIAALFGGFGL 60
Query 61 DFQGISAQIAGFHNQFVGALRGGAAAYASAEAANVQQTVVNAVNAPAQALLGHPLIG 117
++Q ISAQ+A +H +FV AL GA AYASAEA +Q V+ +NAP QALLG PLIG
Sbjct 61 EYQAISAQVAAYHQRFVQALSTGAGAYASAEATAAEQIVLGVINAPTQALLGRPLIG 117
>gi|341603448|emb|CCC66129.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length=1665
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/117 (54%), Positives = 85/117 (73%), Gaps = 0/117 (0%)
Query 1 MSFLTVAPDMVTAAAGNLESVGSALNEAAAAAAPATVGLAAPAADRVSAVVAAMLGAYAR 60
MSF+ +AP+ VTAAAG+L ++GS+++ A A+AA AT + A AD VSA +AA+ G +
Sbjct 1 MSFVLIAPEFVTAAAGDLTNLGSSISAANASAASATTQVLAAGADEVSARIAALFGGFGL 60
Query 61 DFQGISAQIAGFHNQFVGALRGGAAAYASAEAANVQQTVVNAVNAPAQALLGHPLIG 117
++Q ISAQ+A +H +FV AL GA AYASAEA +Q V+ +NAP QALLG PLIG
Sbjct 61 EYQAISAQVAAYHQRFVQALSTGAGAYASAEATAAEQIVLGVINAPTQALLGRPLIG 117
>gi|297733265|ref|ZP_06962383.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN R506]
Length=330
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/117 (57%), Positives = 87/117 (75%), Gaps = 0/117 (0%)
Query 1 MSFLTVAPDMVTAAAGNLESVGSALNEAAAAAAPATVGLAAPAADRVSAVVAAMLGAYAR 60
MSF+ P+ ++AAA +L ++GS ++ A AAA+ T G+ A AD VSA +AA+ GA+A+
Sbjct 1 MSFVIAVPEFLSAAATDLANLGSTISAANAAASIPTTGVLAAGADDVSAAIAALFGAHAQ 60
Query 61 DFQGISAQIAGFHNQFVGALRGGAAAYASAEAANVQQTVVNAVNAPAQALLGHPLIG 117
+Q ISAQ A FH QFV L GA AYA+AEAANVQQ+++NA+NAP QALLG PLIG
Sbjct 61 AYQTISAQAATFHAQFVQTLSAGAGAYANAEAANVQQSLLNAINAPTQALLGRPLIG 117
>gi|254234165|ref|ZP_04927489.1| PE-PGRS family protein [Mycobacterium tuberculosis C]
gi|124603833|gb|EAY61796.1| PE-PGRS family protein [Mycobacterium tuberculosis C]
Length=327
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/117 (57%), Positives = 87/117 (75%), Gaps = 0/117 (0%)
Query 1 MSFLTVAPDMVTAAAGNLESVGSALNEAAAAAAPATVGLAAPAADRVSAVVAAMLGAYAR 60
MSF+ P+ ++AAA +L ++GS ++ A AAA+ T G+ A AD VSA +AA+ GA+A+
Sbjct 1 MSFVIAVPEFLSAAATDLANLGSTISAANAAASIPTTGVLAAGADDVSAAIAALFGAHAQ 60
Query 61 DFQGISAQIAGFHNQFVGALRGGAAAYASAEAANVQQTVVNAVNAPAQALLGHPLIG 117
+Q ISAQ A FH QFV L GA AYA+AEAANVQQ+++NA+NAP QALLG PLIG
Sbjct 61 AYQTISAQAATFHAQFVQTLSAGAGAYANAEAANVQQSLLNAINAPTQALLGRPLIG 117
>gi|254552706|ref|ZP_05143153.1| PE-PGRS family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
Length=348
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/117 (57%), Positives = 87/117 (75%), Gaps = 0/117 (0%)
Query 1 MSFLTVAPDMVTAAAGNLESVGSALNEAAAAAAPATVGLAAPAADRVSAVVAAMLGAYAR 60
MSF+ P+ ++AAA +L ++GS ++ A AAA+ T G+ A AD VSA +AA+ GA+A+
Sbjct 1 MSFVIAVPEFLSAAATDLANLGSTISAANAAASIPTTGVLAAGADDVSAAIAALFGAHAQ 60
Query 61 DFQGISAQIAGFHNQFVGALRGGAAAYASAEAANVQQTVVNAVNAPAQALLGHPLIG 117
+Q ISAQ A FH QFV L GA AYA+AEAANVQQ+++NA+NAP QALLG PLIG
Sbjct 61 AYQTISAQAATFHAQFVQTLSAGAGAYANAEAANVQQSLLNAINAPTQALLGRPLIG 117
>gi|306795977|ref|ZP_07434279.1| putative PE family protein [Mycobacterium tuberculosis SUMu006]
gi|308343543|gb|EFP32394.1| putative PE family protein [Mycobacterium tuberculosis SUMu006]
Length=199
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/117 (57%), Positives = 87/117 (75%), Gaps = 0/117 (0%)
Query 1 MSFLTVAPDMVTAAAGNLESVGSALNEAAAAAAPATVGLAAPAADRVSAVVAAMLGAYAR 60
MSF+ P+ ++AAA +L ++GS ++ A AAA+ T G+ A AD VSA +AA+ GA+A+
Sbjct 1 MSFVIAVPEFLSAAATDLANLGSTISAANAAASIPTTGVLAAGADDVSAAIAALFGAHAQ 60
Query 61 DFQGISAQIAGFHNQFVGALRGGAAAYASAEAANVQQTVVNAVNAPAQALLGHPLIG 117
+Q ISAQ A FH QFV L GA AYA+AEAANVQQ+++NA+NAP QALLG PLIG
Sbjct 61 AYQTISAQAATFHAQFVQTLSAGAGAYANAEAANVQQSLLNAINAPTQALLGRPLIG 117
>gi|323717704|gb|EGB26904.1| PE-PGRS family protein [Mycobacterium tuberculosis CDC1551A]
Length=158
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/117 (57%), Positives = 87/117 (75%), Gaps = 0/117 (0%)
Query 1 MSFLTVAPDMVTAAAGNLESVGSALNEAAAAAAPATVGLAAPAADRVSAVVAAMLGAYAR 60
MSF+ P+ ++AAA +L ++GS ++ A AAA+ T G+ A AD VSA +AA+ GA+A+
Sbjct 1 MSFVIAVPEFLSAAATDLANLGSTISAANAAASIPTTGVLAAGADDVSAAIAALFGAHAQ 60
Query 61 DFQGISAQIAGFHNQFVGALRGGAAAYASAEAANVQQTVVNAVNAPAQALLGHPLIG 117
+Q ISAQ A FH QFV L GA AYA+AEAANVQQ+++NA+NAP QALLG PLIG
Sbjct 61 AYQTISAQAATFHAQFVQTLSAGAGAYANAEAANVQQSLLNAINAPTQALLGRPLIG 117
>gi|306801223|ref|ZP_07437891.1| putative PE family protein [Mycobacterium tuberculosis SUMu008]
gi|306805437|ref|ZP_07442105.1| putative PE family protein [Mycobacterium tuberculosis SUMu007]
gi|308348010|gb|EFP36861.1| putative PE family protein [Mycobacterium tuberculosis SUMu007]
gi|308351951|gb|EFP40802.1| putative PE family protein [Mycobacterium tuberculosis SUMu008]
Length=172
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/117 (57%), Positives = 87/117 (75%), Gaps = 0/117 (0%)
Query 1 MSFLTVAPDMVTAAAGNLESVGSALNEAAAAAAPATVGLAAPAADRVSAVVAAMLGAYAR 60
MSF+ P+ ++AAA +L ++GS ++ A AAA+ T G+ A AD VSA +AA+ GA+A+
Sbjct 1 MSFVIAVPEFLSAAATDLANLGSTISAANAAASIPTTGVLAAGADDVSAAIAALFGAHAQ 60
Query 61 DFQGISAQIAGFHNQFVGALRGGAAAYASAEAANVQQTVVNAVNAPAQALLGHPLIG 117
+Q ISAQ A FH QFV L GA AYA+AEAANVQQ+++NA+NAP QALLG PLIG
Sbjct 61 AYQTISAQAATFHAQFVQTLSAGAGAYANAEAANVQQSLLNAINAPTQALLGRPLIG 117
>gi|306791192|ref|ZP_07429494.1| putative PE family protein [Mycobacterium tuberculosis SUMu005]
gi|308340221|gb|EFP29072.1| putative PE family protein [Mycobacterium tuberculosis SUMu005]
Length=180
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/117 (57%), Positives = 87/117 (75%), Gaps = 0/117 (0%)
Query 1 MSFLTVAPDMVTAAAGNLESVGSALNEAAAAAAPATVGLAAPAADRVSAVVAAMLGAYAR 60
MSF+ P+ ++AAA +L ++GS ++ A AAA+ T G+ A AD VSA +AA+ GA+A+
Sbjct 1 MSFVIAVPEFLSAAATDLANLGSTISAANAAASIPTTGVLAAGADDVSAAIAALFGAHAQ 60
Query 61 DFQGISAQIAGFHNQFVGALRGGAAAYASAEAANVQQTVVNAVNAPAQALLGHPLIG 117
+Q ISAQ A FH QFV L GA AYA+AEAANVQQ+++NA+NAP QALLG PLIG
Sbjct 61 AYQTISAQAATFHAQFVQTLSAGAGAYANAEAANVQQSLLNAINAPTQALLGRPLIG 117
Lambda K H
0.316 0.131 0.374
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 530605165806
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40