BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1677
Length=182
Score E
Sequences producing significant alignments: (Bits) Value
gi|15608815|ref|NP_216193.1| lipoprotein DsbF [Mycobacterium tub... 369 1e-100
gi|289443134|ref|ZP_06432878.1| lipoprotein dsbF [Mycobacterium ... 366 1e-99
gi|289447289|ref|ZP_06437033.1| lipoprotein dsbF [Mycobacterium ... 365 1e-99
gi|254231872|ref|ZP_04925199.1| lipoprotein dsbF [Mycobacterium ... 313 9e-84
gi|283135371|pdb|3IOS|A Chain A, Structure Of Mtb Dsbf In Its Mi... 283 6e-75
gi|73536037|pdb|1ZZO|A Chain A, Structure Of Mtb Dsbf In Its Oxi... 283 6e-75
gi|183985025|ref|YP_001853316.1| lipoprotein DsbF [Mycobacterium... 192 2e-47
gi|118619313|ref|YP_907645.1| lipoprotein DsbF [Mycobacterium ul... 183 1e-44
gi|333989291|ref|YP_004521905.1| lipoprotein DsbF [Mycobacterium... 175 2e-42
gi|331695158|ref|YP_004331397.1| Redoxin domain-containing prote... 172 1e-41
gi|317508492|ref|ZP_07966159.1| redoxin protein [Segniliparus ru... 172 1e-41
gi|5051813|emb|CAB45042.1| putative [Amycolatopsis orientalis] 161 3e-38
gi|119714251|ref|YP_919393.1| redoxin domain-containing protein ... 158 4e-37
gi|169631354|ref|YP_001705003.1| lipoprotein DsbF [Mycobacterium... 156 2e-36
gi|118471517|ref|YP_887846.1| hypothetical protein MSMEG_3543 [M... 151 3e-35
gi|15842420|ref|NP_337457.1| soluble secreted antigen MPT53 prec... 144 5e-33
gi|15610015|ref|NP_217394.1| soluble secreted antigen MPT53 prec... 144 6e-33
gi|340627870|ref|YP_004746322.1| soluble secreted antigen MPT53 ... 144 6e-33
gi|157382530|gb|ABV48763.1| MPC53 [Mycobacterium canettii] 144 6e-33
gi|254819035|ref|ZP_05224036.1| 15 kDa antigen [Mycobacterium in... 143 8e-33
gi|317507657|ref|ZP_07965366.1| redoxin protein [Segniliparus ru... 143 1e-32
gi|38492424|pdb|1LU4|A Chain A, 1.1 Angstrom Resolution Crystal ... 142 1e-32
gi|39578303|gb|AAR28661.1| 15 kDa antigen [Mycobacterium avium s... 142 1e-32
gi|41409040|ref|NP_961876.1| Mpt53 [Mycobacterium avium subsp. p... 142 2e-32
gi|240169783|ref|ZP_04748442.1| lipoprotein DsbF [Mycobacterium ... 142 2e-32
gi|118465076|ref|YP_882904.1| 15 kDa antigen [Mycobacterium aviu... 140 6e-32
gi|296392757|ref|YP_003657641.1| redoxin domain-containing prote... 140 7e-32
gi|342858275|ref|ZP_08714930.1| 15 kDa antigen [Mycobacterium co... 139 2e-31
gi|289751544|ref|ZP_06510922.1| LOW QUALITY PROTEIN: soluble sec... 137 7e-31
gi|183981844|ref|YP_001850135.1| soluble secreted antigen Mpt53 ... 135 2e-30
gi|118617648|ref|YP_905980.1| soluble secreted antigen Mpt53 pre... 134 4e-30
gi|240171731|ref|ZP_04750390.1| soluble secreted antigen MPT53 p... 134 5e-30
gi|169630324|ref|YP_001703973.1| soluble secreted antigen MPT53 ... 133 9e-30
gi|145594086|ref|YP_001158383.1| redoxin domain-containing prote... 123 1e-26
gi|330469510|ref|YP_004407253.1| redoxin domain-containing prote... 119 1e-25
gi|159037117|ref|YP_001536370.1| redoxin domain-containing prote... 119 2e-25
gi|238060460|ref|ZP_04605169.1| redoxin domain-containing protei... 113 1e-23
gi|302869186|ref|YP_003837823.1| redoxin domain-containing prote... 109 1e-22
gi|315504337|ref|YP_004083224.1| redoxin domain-containing prote... 104 4e-21
gi|317506826|ref|ZP_07964600.1| redoxin protein [Segniliparus ru... 96.3 2e-18
gi|119716307|ref|YP_923272.1| redoxin domain-containing protein ... 86.3 2e-15
gi|240171057|ref|ZP_04749716.1| putative lipoprotein [Mycobacter... 85.9 2e-15
gi|146296080|ref|YP_001179851.1| alkyl hydroperoxide reductase/ ... 75.9 2e-12
gi|310641368|ref|YP_003946126.1| thioredoxin family protein [Pae... 75.5 3e-12
gi|320333754|ref|YP_004170465.1| alkyl hydroperoxide reductase/ ... 74.3 7e-12
gi|269837447|ref|YP_003319675.1| Redoxin domain-containing prote... 73.9 1e-11
gi|308068488|ref|YP_003870093.1| thioredoxin-like thiol-disulfid... 73.6 1e-11
gi|317505215|ref|ZP_07963147.1| conserved hypothetical protein [... 72.8 2e-11
gi|332296581|ref|YP_004438504.1| alkyl hydroperoxide reductase/ ... 72.0 4e-11
gi|295695001|ref|YP_003588239.1| alkyl hydroperoxide reductase/ ... 68.9 3e-10
>gi|15608815|ref|NP_216193.1| lipoprotein DsbF [Mycobacterium tuberculosis H37Rv]
gi|15841133|ref|NP_336170.1| thiol:disulfide interchange protein, putative [Mycobacterium
tuberculosis CDC1551]
gi|31792863|ref|NP_855356.1| lipoprotein DsbF [Mycobacterium bovis AF2122/97]
66 more sequence titles
Length=182
Score = 369 bits (946), Expect = 1e-100, Method: Compositional matrix adjust.
Identities = 181/182 (99%), Positives = 182/182 (100%), Gaps = 0/182 (0%)
Query 1 VTHSRLIGALTVVAIIVTACGSQPKSQPAVAPTGDAAAATQVPAGQTVPAQLQFSAKTLD 60
+THSRLIGALTVVAIIVTACGSQPKSQPAVAPTGDAAAATQVPAGQTVPAQLQFSAKTLD
Sbjct 1 MTHSRLIGALTVVAIIVTACGSQPKSQPAVAPTGDAAAATQVPAGQTVPAQLQFSAKTLD 60
Query 61 GHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHPEVTFVGVAGLDQVPAMQEF 120
GHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHPEVTFVGVAGLDQVPAMQEF
Sbjct 61 GHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHPEVTFVGVAGLDQVPAMQEF 120
Query 121 VNKYPVKTFTQLADTDGSVWANFGVTQQPAYAFVDPHGNVDVVRGRMSQDELTRRVTALT 180
VNKYPVKTFTQLADTDGSVWANFGVTQQPAYAFVDPHGNVDVVRGRMSQDELTRRVTALT
Sbjct 121 VNKYPVKTFTQLADTDGSVWANFGVTQQPAYAFVDPHGNVDVVRGRMSQDELTRRVTALT 180
Query 181 SR 182
SR
Sbjct 181 SR 182
>gi|289443134|ref|ZP_06432878.1| lipoprotein dsbF [Mycobacterium tuberculosis T46]
gi|289569724|ref|ZP_06449951.1| lipoprotein dsbF [Mycobacterium tuberculosis T17]
gi|289750233|ref|ZP_06509611.1| lipoprotein dsbF [Mycobacterium tuberculosis T92]
gi|289753768|ref|ZP_06513146.1| lipoprotein DsbF [Mycobacterium tuberculosis EAS054]
gi|289416053|gb|EFD13293.1| lipoprotein dsbF [Mycobacterium tuberculosis T46]
gi|289543478|gb|EFD47126.1| lipoprotein dsbF [Mycobacterium tuberculosis T17]
gi|289690820|gb|EFD58249.1| lipoprotein dsbF [Mycobacterium tuberculosis T92]
gi|289694355|gb|EFD61784.1| lipoprotein DsbF [Mycobacterium tuberculosis EAS054]
Length=182
Score = 366 bits (939), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 180/182 (99%), Positives = 181/182 (99%), Gaps = 0/182 (0%)
Query 1 VTHSRLIGALTVVAIIVTACGSQPKSQPAVAPTGDAAAATQVPAGQTVPAQLQFSAKTLD 60
+THSRLIGALTVVAIIVTACGSQPKSQPAVAPTGDAAAATQVPAGQTVPAQLQFSAKTLD
Sbjct 1 MTHSRLIGALTVVAIIVTACGSQPKSQPAVAPTGDAAAATQVPAGQTVPAQLQFSAKTLD 60
Query 61 GHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHPEVTFVGVAGLDQVPAMQEF 120
GHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHPEVTFVGVAGLDQVPAMQEF
Sbjct 61 GHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHPEVTFVGVAGLDQVPAMQEF 120
Query 121 VNKYPVKTFTQLADTDGSVWANFGVTQQPAYAFVDPHGNVDVVRGRMSQDELTRRVTALT 180
VNKYPVKTFTQLADTD SVWANFGVTQQPAYAFVDPHGNVDVVRGRMSQDELTRRVTALT
Sbjct 121 VNKYPVKTFTQLADTDRSVWANFGVTQQPAYAFVDPHGNVDVVRGRMSQDELTRRVTALT 180
Query 181 SR 182
SR
Sbjct 181 SR 182
>gi|289447289|ref|ZP_06437033.1| lipoprotein dsbF [Mycobacterium tuberculosis CPHL_A]
gi|289420247|gb|EFD17448.1| lipoprotein dsbF [Mycobacterium tuberculosis CPHL_A]
Length=182
Score = 365 bits (938), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 180/182 (99%), Positives = 181/182 (99%), Gaps = 0/182 (0%)
Query 1 VTHSRLIGALTVVAIIVTACGSQPKSQPAVAPTGDAAAATQVPAGQTVPAQLQFSAKTLD 60
+THSRLIGALTVVAIIVTACGSQPKSQPAVAPTGDAAAATQVPAGQTVPAQLQFSAKTLD
Sbjct 1 MTHSRLIGALTVVAIIVTACGSQPKSQPAVAPTGDAAAATQVPAGQTVPAQLQFSAKTLD 60
Query 61 GHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHPEVTFVGVAGLDQVPAMQEF 120
GHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHPEVTFVGVAGLDQVPAMQEF
Sbjct 61 GHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHPEVTFVGVAGLDQVPAMQEF 120
Query 121 VNKYPVKTFTQLADTDGSVWANFGVTQQPAYAFVDPHGNVDVVRGRMSQDELTRRVTALT 180
VNKYPVKTFTQLADT GSVWANFGVTQQPAYAFVDPHGNVDVVRGRMSQDELTRRVTALT
Sbjct 121 VNKYPVKTFTQLADTAGSVWANFGVTQQPAYAFVDPHGNVDVVRGRMSQDELTRRVTALT 180
Query 181 SR 182
SR
Sbjct 181 SR 182
>gi|254231872|ref|ZP_04925199.1| lipoprotein dsbF [Mycobacterium tuberculosis C]
gi|124600931|gb|EAY59941.1| lipoprotein dsbF [Mycobacterium tuberculosis C]
gi|339294633|gb|AEJ46744.1| lipoprotein DsbF [Mycobacterium tuberculosis CCDC5079]
gi|339298266|gb|AEJ50376.1| lipoprotein DsbF [Mycobacterium tuberculosis CCDC5180]
Length=153
Score = 313 bits (801), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 152/153 (99%), Positives = 153/153 (100%), Gaps = 0/153 (0%)
Query 30 VAPTGDAAAATQVPAGQTVPAQLQFSAKTLDGHDFHGESLLGKPAVLWFWAPWCPTCQGE 89
+APTGDAAAATQVPAGQTVPAQLQFSAKTLDGHDFHGESLLGKPAVLWFWAPWCPTCQGE
Sbjct 1 MAPTGDAAAATQVPAGQTVPAQLQFSAKTLDGHDFHGESLLGKPAVLWFWAPWCPTCQGE 60
Query 90 APVVGQVAASHPEVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQQP 149
APVVGQVAASHPEVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQQP
Sbjct 61 APVVGQVAASHPEVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQQP 120
Query 150 AYAFVDPHGNVDVVRGRMSQDELTRRVTALTSR 182
AYAFVDPHGNVDVVRGRMSQDELTRRVTALTSR
Sbjct 121 AYAFVDPHGNVDVVRGRMSQDELTRRVTALTSR 153
>gi|283135371|pdb|3IOS|A Chain A, Structure Of Mtb Dsbf In Its Mixed Oxidized And Reduced
Forms
Length=150
Score = 283 bits (725), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 136/136 (100%), Positives = 136/136 (100%), Gaps = 0/136 (0%)
Query 47 TVPAQLQFSAKTLDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHPEVTFV 106
TVPAQLQFSAKTLDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHPEVTFV
Sbjct 15 TVPAQLQFSAKTLDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHPEVTFV 74
Query 107 GVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQQPAYAFVDPHGNVDVVRGR 166
GVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQQPAYAFVDPHGNVDVVRGR
Sbjct 75 GVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQQPAYAFVDPHGNVDVVRGR 134
Query 167 MSQDELTRRVTALTSR 182
MSQDELTRRVTALTSR
Sbjct 135 MSQDELTRRVTALTSR 150
>gi|73536037|pdb|1ZZO|A Chain A, Structure Of Mtb Dsbf In Its Oxidized Form.
Length=136
Score = 283 bits (725), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 136/136 (100%), Positives = 136/136 (100%), Gaps = 0/136 (0%)
Query 47 TVPAQLQFSAKTLDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHPEVTFV 106
TVPAQLQFSAKTLDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHPEVTFV
Sbjct 1 TVPAQLQFSAKTLDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHPEVTFV 60
Query 107 GVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQQPAYAFVDPHGNVDVVRGR 166
GVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQQPAYAFVDPHGNVDVVRGR
Sbjct 61 GVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQQPAYAFVDPHGNVDVVRGR 120
Query 167 MSQDELTRRVTALTSR 182
MSQDELTRRVTALTSR
Sbjct 121 MSQDELTRRVTALTSR 136
>gi|183985025|ref|YP_001853316.1| lipoprotein DsbF [Mycobacterium marinum M]
gi|183178351|gb|ACC43461.1| conserved lipoprotein DsbF [Mycobacterium marinum M]
Length=181
Score = 192 bits (487), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 97/180 (54%), Positives = 124/180 (69%), Gaps = 4/180 (2%)
Query 5 RLIGALTVVA--IIVTACGSQPKSQPAVAPTGDAAAATQVPAGQTVPAQLQFSAKTLDGH 62
RLI +L +A + + ACGS + PA AP + A A VPAQLQF+ KT+DG
Sbjct 4 RLIASLAGIAAALTIAACGSSGTASPAGAPASSSNAVANRAA--HVPAQLQFTTKTIDGK 61
Query 63 DFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHPEVTFVGVAGLDQVPAMQEFVN 122
F GESL GK VLWFW PWCP CQ EAP+V + AA++PE TFVGVA ++ AMQ FV+
Sbjct 62 PFSGESLAGKATVLWFWTPWCPKCQQEAPIVAKAAAANPEATFVGVAAREEASAMQAFVD 121
Query 123 KYPVKTFTQLADTDGSVWANFGVTQQPAYAFVDPHGNVDVVRGRMSQDELTRRVTALTSR 182
KY + TQLAD+DG VW+NFGVTQQPA+AF+ +G V+VV+G +S+ +LT RV LT +
Sbjct 122 KYQLGDVTQLADSDGQVWSNFGVTQQPAWAFISANGEVEVVKGGLSEAQLTERVNGLTGK 181
>gi|118619313|ref|YP_907645.1| lipoprotein DsbF [Mycobacterium ulcerans Agy99]
gi|118571423|gb|ABL06174.1| conserved lipoprotein DsbF [Mycobacterium ulcerans Agy99]
Length=191
Score = 183 bits (464), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 95/188 (51%), Positives = 126/188 (68%), Gaps = 10/188 (5%)
Query 5 RLIGALTVVA--IIVTACGSQPKSQPA------VAPTGDAAAATQVPAGQT--VPAQLQF 54
RLI +L +A + + ACGS + PA +P G A+++ A + VPAQLQF
Sbjct 4 RLIASLAGIAAALTIAACGSSGTASPAGGSSGTASPAGAPASSSNAVANRAAHVPAQLQF 63
Query 55 SAKTLDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHPEVTFVGVAGLDQV 114
+ KT+DG F GESL GK VLWF PWCP CQ EAP+V + AA++PE TFVGVA ++
Sbjct 64 TTKTIDGKPFSGESLAGKATVLWFSTPWCPKCQQEAPIVAKAAAANPEATFVGVAAREEA 123
Query 115 PAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQQPAYAFVDPHGNVDVVRGRMSQDELTR 174
AMQ FV+KY + TQLAD+DG VW+NFGVTQQPA+AF+ +G V+VV+G +S+ +LT
Sbjct 124 SAMQAFVDKYQLGDVTQLADSDGQVWSNFGVTQQPAWAFISANGEVEVVKGVLSEAQLTE 183
Query 175 RVTALTSR 182
RV T +
Sbjct 184 RVNGFTGK 191
>gi|333989291|ref|YP_004521905.1| lipoprotein DsbF [Mycobacterium sp. JDM601]
gi|333485259|gb|AEF34651.1| lipoprotein DsbF [Mycobacterium sp. JDM601]
Length=152
Score = 175 bits (444), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 89/172 (52%), Positives = 114/172 (67%), Gaps = 21/172 (12%)
Query 10 LTVVAIIVTACGSQPKSQPAVAPTGDAAAATQVPAGQTVPAQLQFSAKTLDGHDFHGESL 69
+ + A++V CGS+ PA T QL F+A+TLDG F G SL
Sbjct 1 MLLAALLVAGCGSR------------------TPAEGT---QLDFTAQTLDGRPFSGASL 39
Query 70 LGKPAVLWFWAPWCPTCQGEAPVVGQVAASHPEVTFVGVAGLDQVPAMQEFVNKYPVKTF 129
G+PAVLWFWAPWCPTCQ +AP+V +VAA++P VTFVGV DQ A++EF KY V F
Sbjct 40 AGRPAVLWFWAPWCPTCQKDAPLVARVAAANPAVTFVGVGARDQPDALREFTAKYGVDGF 99
Query 130 TQLADTDGSVWANFGVTQQPAYAFVDPHGNVDVVRGRMSQDELTRRVTALTS 181
T+LADTD +VWA FGVT+QPA+AF+ P G V+VV+G + + EL+ RV AL S
Sbjct 100 TELADTDAAVWARFGVTRQPAFAFISPGGEVEVVKGSLPEAELSARVQALKS 151
>gi|331695158|ref|YP_004331397.1| Redoxin domain-containing protein [Pseudonocardia dioxanivorans
CB1190]
gi|326949847|gb|AEA23544.1| Redoxin domain protein [Pseudonocardia dioxanivorans CB1190]
Length=176
Score = 172 bits (437), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 88/173 (51%), Positives = 110/173 (64%), Gaps = 6/173 (3%)
Query 7 IGALTVVAIIVTACGSQPKSQPAVAPTGDAAAATQVPAGQTVPAQLQFSAKTLDGHDFHG 66
I +L ++ I V A +P A +G+ A P L+F+A T+DG F G
Sbjct 7 ILSLALITIAVAAGCGRP------ADSGEQRQAAPAEQSNAAPDALKFTATTVDGQRFSG 60
Query 67 ESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHPEVTFVGVAGLDQVPAMQEFVNKYPV 126
ESL GKPAVLWFWA WCP CQGE+ V +VA ++ VTFVGVA L PAM+EFV +Y +
Sbjct 61 ESLAGKPAVLWFWASWCPVCQGESAGVEKVAQANSTVTFVGVAALSDAPAMREFVTRYGI 120
Query 127 KTFTQLADTDGSVWANFGVTQQPAYAFVDPHGNVDVVRGRMSQDELTRRVTAL 179
+FT LADTD SVW FGVT QPAYAFV P+G V+ V+ +S+DEL RV L
Sbjct 121 GSFTNLADTDASVWQRFGVTSQPAYAFVRPNGTVETVKSGLSEDELAARVHQL 173
>gi|317508492|ref|ZP_07966159.1| redoxin protein [Segniliparus rugosus ATCC BAA-974]
gi|316253183|gb|EFV12586.1| redoxin protein [Segniliparus rugosus ATCC BAA-974]
Length=175
Score = 172 bits (437), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 92/166 (56%), Positives = 117/166 (71%), Gaps = 12/166 (7%)
Query 28 PAVAPTGDAAAATQVPAGQTVPA-----------QLQFSAKTLDGHDFHGESLLGKPAVL 76
P +A A + PAG + PA QL+FSAKTLDG DF GE+L GKPAVL
Sbjct 11 PVLAAFASAGCSHADPAGGSNPAAASAAGHAAPAQLRFSAKTLDGADFSGETLAGKPAVL 70
Query 77 WFWAPWCPTCQGEAPVVGQVAASHPEVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTD 136
WFWAPWCPTCQ EA +V +VAA+HP V FVGV D +PA+Q+FV+K+ + TFTQL D D
Sbjct 71 WFWAPWCPTCQREAAMVAKVAAAHPGVAFVGVGARDSLPALQDFVSKHSL-TFTQLNDAD 129
Query 137 GSVWANFGVTQQPAYAFVDPHGNVDVVRGRMSQDELTRRVTALTSR 182
VWA FG+T+QPAYAFV P+G+V+VV+ +S++EL RR+ A+ R
Sbjct 130 SKVWAQFGITRQPAYAFVGPNGSVEVVKDSLSEEELNRRIAAIDRR 175
>gi|5051813|emb|CAB45042.1| putative [Amycolatopsis orientalis]
Length=191
Score = 161 bits (408), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 93/191 (49%), Positives = 118/191 (62%), Gaps = 15/191 (7%)
Query 3 HSRLIGA-LTVVAIIVTACGSQPKSQPAVAPTGDAAAATQVP----------AGQTVPAQ 51
R+ GA L + + ACG+ S AP ++AA Q A +VP Q
Sbjct 3 RRRIAGAVLAAILTSLAACGTDTSS---TAPGTNSAAPPQTTSTGTSTTSTQASPSVPDQ 59
Query 52 LQFSAKTLDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAA-SHPEVTFVGVAG 110
L+F+ +T+DG F GESL GK AVLWFWAPWCP C+ EAP V A + +VTFVGVA
Sbjct 60 LKFTVQTVDGQSFSGESLAGKKAVLWFWAPWCPKCRAEAPRVAAAAQATSGKVTFVGVAA 119
Query 111 LDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQQPAYAFVDPHGNVDVVRGRMSQD 170
D +PAM++FV Y V FT LAD D ++W FGVTQQPAYAF+ P G VDVV+ ++S+
Sbjct 120 QDALPAMKKFVTDYKVSGFTHLADLDAAIWTRFGVTQQPAYAFISPDGKVDVVKQQLSES 179
Query 171 ELTRRVTALTS 181
LT RV ALT+
Sbjct 180 ALTERVNALTA 190
>gi|119714251|ref|YP_919393.1| redoxin domain-containing protein [Nocardioides sp. JS614]
gi|119526160|gb|ABL79530.1| Redoxin domain protein [Nocardioides sp. JS614]
Length=208
Score = 158 bits (399), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 79/152 (52%), Positives = 98/152 (65%), Gaps = 0/152 (0%)
Query 31 APTGDAAAATQVPAGQTVPAQLQFSAKTLDGHDFHGESLLGKPAVLWFWAPWCPTCQGEA 90
AP+ AA Q A V +L+F+A+++DG F G +L GK AVLWFWAPWC C+ EA
Sbjct 57 APSSPAATRKQTGAEPPVAEELKFTAQSVDGEAFDGATLAGKDAVLWFWAPWCTECRREA 116
Query 91 PVVGQVAASHPEVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQQPA 150
P V A +P V FVGVAGL + M++FV+ Y V F+ LAD DGS+W FGV QQPA
Sbjct 117 PHVAASQADNPGVVFVGVAGLGETADMRDFVDDYDVDAFSHLADLDGSLWQRFGVVQQPA 176
Query 151 YAFVDPHGNVDVVRGRMSQDELTRRVTALTSR 182
YAFVD G V+VVRG + +D L V LTS
Sbjct 177 YAFVDDTGTVEVVRGELGEDGLAEHVATLTSN 208
>gi|169631354|ref|YP_001705003.1| lipoprotein DsbF [Mycobacterium abscessus ATCC 19977]
gi|169243321|emb|CAM64349.1| Probable conserved lipoprotein DsbF [Mycobacterium abscessus]
Length=159
Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 74/128 (58%), Positives = 93/128 (73%), Gaps = 1/128 (0%)
Query 52 LQFSAKTLDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHPEVTFVGVAGL 111
L F+A+T+DG DF G SL GK AVLWFWAPWCPTCQ EAP + + A +H +VTFVGVA
Sbjct 32 LNFTAQTIDGADFAGSSLAGKKAVLWFWAPWCPTCQKEAPDLQKAATAHSDVTFVGVAAQ 91
Query 112 DQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQQPAYAFVDPHGNVDVVRGRMSQDE 171
DQVPAM++FV KY + TF QLADTD VWA + VT QPA+AF+ G +VV+ +S E
Sbjct 92 DQVPAMRDFVTKYGL-TFIQLADTDAKVWALYDVTHQPAFAFLGAEGKAEVVKSPLSGPE 150
Query 172 LTRRVTAL 179
L +++ L
Sbjct 151 LDKKIGQL 158
>gi|118471517|ref|YP_887846.1| hypothetical protein MSMEG_3543 [Mycobacterium smegmatis str.
MC2 155]
gi|118172804|gb|ABK73700.1| soluble secreted antigen MPT53 [Mycobacterium smegmatis str.
MC2 155]
Length=176
Score = 151 bits (382), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 86/166 (52%), Positives = 99/166 (60%), Gaps = 11/166 (6%)
Query 26 SQPAVAPTGDAAAATQVPAGQTVPA-------QLQFSAKTLDGHDFHGESLLGKPAVLWF 78
++P V T A AT V A V A +LQF+ TL G F G SL GKPAVLWF
Sbjct 12 ARPGVLGTLSAVVATVVLATALVLAPSAVADDRLQFTGTTLSGASFDGSSLAGKPAVLWF 71
Query 79 WAPWCPTCQGEAPVVGQVAASHPEVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDGS 138
W PWCP C EAP VGQVAA++PEVTFVGVA V AMQ FV+KY + FT L D DGS
Sbjct 72 WTPWCPFCNAEAPSVGQVAAANPEVTFVGVAARSDVAAMQGFVDKYNLN-FTNLNDADGS 130
Query 139 VWANFGVTQQPAYAFVDPHGNVDVVRG---RMSQDELTRRVTALTS 181
+WA + V QPAY F G+ V MS+ EL+ RV AL S
Sbjct 131 IWARYNVPWQPAYVFYRADGSSTFVNNPTSAMSKQELSDRVAALNS 176
>gi|15842420|ref|NP_337457.1| soluble secreted antigen MPT53 precursor [Mycobacterium tuberculosis
CDC1551]
gi|289746678|ref|ZP_06506056.1| soluble secreted antigen MPT53 [Mycobacterium tuberculosis 02_1987]
gi|13882722|gb|AAK47271.1| soluble secreted antigen MPT53 precursor [Mycobacterium tuberculosis
CDC1551]
gi|289687206|gb|EFD54694.1| soluble secreted antigen MPT53 [Mycobacterium tuberculosis 02_1987]
Length=177
Score = 144 bits (363), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 74/134 (56%), Positives = 86/134 (65%), Gaps = 4/134 (2%)
Query 51 QLQFSAKTLDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHPEVTFVGVAG 110
+LQF+A TL G F G SL GKPAVLWFW PWCP C EAP + QVAA++P VTFVG+A
Sbjct 45 RLQFTATTLSGAPFDGASLQGKPAVLWFWTPWCPFCNAEAPSLSQVAAANPAVTFVGIAT 104
Query 111 LDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQQPAYAFVDPHGNVDVVRG---RM 167
V AMQ FV+KY + FT L D DG +WA + V QPA+ F G V M
Sbjct 105 RADVGAMQSFVSKYNLN-FTNLNDADGVIWARYNVPWQPAFVFYRADGTSTFVNNPTAAM 163
Query 168 SQDELTRRVTALTS 181
SQDEL+ RV ALTS
Sbjct 164 SQDELSGRVAALTS 177
>gi|15610015|ref|NP_217394.1| soluble secreted antigen MPT53 precursor [Mycobacterium tuberculosis
H37Rv]
gi|31794055|ref|NP_856548.1| soluble secreted antigen mpb53 [Mycobacterium bovis AF2122/97]
gi|121638760|ref|YP_978984.1| soluble secreted antigen mpb53 [Mycobacterium bovis BCG str.
Pasteur 1173P2]
75 more sequence titles
Length=173
Score = 144 bits (363), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 74/134 (56%), Positives = 86/134 (65%), Gaps = 4/134 (2%)
Query 51 QLQFSAKTLDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHPEVTFVGVAG 110
+LQF+A TL G F G SL GKPAVLWFW PWCP C EAP + QVAA++P VTFVG+A
Sbjct 41 RLQFTATTLSGAPFDGASLQGKPAVLWFWTPWCPFCNAEAPSLSQVAAANPAVTFVGIAT 100
Query 111 LDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQQPAYAFVDPHGNVDVVRG---RM 167
V AMQ FV+KY + FT L D DG +WA + V QPA+ F G V M
Sbjct 101 RADVGAMQSFVSKYNLN-FTNLNDADGVIWARYNVPWQPAFVFYRADGTSTFVNNPTAAM 159
Query 168 SQDELTRRVTALTS 181
SQDEL+ RV ALTS
Sbjct 160 SQDELSGRVAALTS 173
>gi|340627870|ref|YP_004746322.1| soluble secreted antigen MPT53 [Mycobacterium canettii CIPT 140010059]
gi|340006060|emb|CCC45231.1| soluble secreted antigen MPT53 precursor [Mycobacterium canettii
CIPT 140010059]
Length=173
Score = 144 bits (363), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 74/134 (56%), Positives = 86/134 (65%), Gaps = 4/134 (2%)
Query 51 QLQFSAKTLDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHPEVTFVGVAG 110
+LQF+A TL G F G SL GKPAVLWFW PWCP C EAP + QVAA++P VTFVG+A
Sbjct 41 RLQFTATTLSGAPFDGASLQGKPAVLWFWTPWCPFCNAEAPSLSQVAAANPAVTFVGIAT 100
Query 111 LDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQQPAYAFVDPHGNVDVVRG---RM 167
V AMQ FV+KY + FT L D DG +WA + V QPA+ F G V M
Sbjct 101 RADVGAMQSFVSKYNLN-FTNLNDADGVIWARYNVPWQPAFVFYRADGTSTFVNNPTAAM 159
Query 168 SQDELTRRVTALTS 181
SQDEL+ RV ALTS
Sbjct 160 SQDELSGRVVALTS 173
>gi|157382530|gb|ABV48763.1| MPC53 [Mycobacterium canettii]
Length=177
Score = 144 bits (363), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 74/134 (56%), Positives = 86/134 (65%), Gaps = 4/134 (2%)
Query 51 QLQFSAKTLDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHPEVTFVGVAG 110
+LQF+A TL G F G SL GKPAVLWFW PWCP C EAP + QVAA++P VTFVG+A
Sbjct 45 RLQFTATTLSGAPFDGASLQGKPAVLWFWTPWCPFCNAEAPSLSQVAAANPAVTFVGIAT 104
Query 111 LDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQQPAYAFVDPHGNVDVVRG---RM 167
V AMQ FV+KY + FT L D DG +WA + V QPA+ F G V M
Sbjct 105 RADVGAMQSFVSKYNLN-FTNLNDADGVIWARYNVPWQPAFVFYRADGTSTFVNNPTAAM 163
Query 168 SQDELTRRVTALTS 181
SQDEL+ RV ALTS
Sbjct 164 SQDELSGRVVALTS 177
>gi|254819035|ref|ZP_05224036.1| 15 kDa antigen [Mycobacterium intracellulare ATCC 13950]
Length=169
Score = 143 bits (361), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 76/142 (54%), Positives = 89/142 (63%), Gaps = 4/142 (2%)
Query 43 PAGQTVPAQLQFSAKTLDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHPE 102
P Q +LQF+A TL G F G SL GKPAVLWFW PWCP C EAP V QVAA++P
Sbjct 29 PRAQAADDRLQFTATTLSGAPFSGASLQGKPAVLWFWTPWCPYCNAEAPGVSQVAAANPG 88
Query 103 VTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQQPAYAFVDPHGNVDV 162
V FVG+A V AMQ FV+KY + FT L DTDG++WA + V QPAY F G+
Sbjct 89 VAFVGIAAHADVGAMQGFVSKYNLN-FTTLNDTDGAIWARYNVPWQPAYVFYRADGSSTF 147
Query 163 VRG---RMSQDELTRRVTALTS 181
V MSQ EL+ RV+AL S
Sbjct 148 VNNPTSAMSQQELSDRVSALKS 169
>gi|317507657|ref|ZP_07965366.1| redoxin protein [Segniliparus rugosus ATCC BAA-974]
gi|316254046|gb|EFV13407.1| redoxin protein [Segniliparus rugosus ATCC BAA-974]
Length=170
Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 69/133 (52%), Positives = 89/133 (67%), Gaps = 3/133 (2%)
Query 49 PAQLQFSAKTLDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHPEVTFVGV 108
P QLQF+ TLDG + G S GKPAV WFW PWCP C E VG+VA+ HP V FVGV
Sbjct 38 PDQLQFTGTTLDGKNIDGASYAGKPAVFWFWTPWCPFCNQEGSFVGKVASEHPGVPFVGV 97
Query 109 AGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQQPAYAFVDPHGNVDVVR--GR 166
A AM++F NKY + F Q+ DT G +WA FGVT QPA+AFV +G+VD+V+
Sbjct 98 ASRSDPGAMKDFANKYGLG-FPQINDTSGEIWARFGVTWQPAFAFVSSNGDVDMVKFGDL 156
Query 167 MSQDELTRRVTAL 179
+++D+L RV++L
Sbjct 157 LNEDQLAERVSSL 169
>gi|38492424|pdb|1LU4|A Chain A, 1.1 Angstrom Resolution Crystal Structure Of A Secreted
Mycobacterium Tuberculosis Disulfide Oxidoreductase Homologous
To E. Coli Dsbe: Implications For Functions
Length=136
Score = 142 bits (359), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/134 (56%), Positives = 86/134 (65%), Gaps = 4/134 (2%)
Query 51 QLQFSAKTLDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHPEVTFVGVAG 110
+LQF+A TL G F G SL GKPAVLWFW PWCP C EAP + QVAA++P VTFVG+A
Sbjct 4 RLQFTATTLSGAPFDGASLQGKPAVLWFWTPWCPFCNAEAPSLSQVAAANPAVTFVGIAT 63
Query 111 LDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQQPAYAFVDPHGNVDVVRG---RM 167
V AMQ FV+KY + FT L D DG +WA + V QPA+ F G V M
Sbjct 64 RADVGAMQSFVSKYNLN-FTNLNDADGVIWARYNVPWQPAFVFYRADGTSTFVNNPTAAM 122
Query 168 SQDELTRRVTALTS 181
SQDEL+ RV ALTS
Sbjct 123 SQDELSGRVAALTS 136
>gi|39578303|gb|AAR28661.1| 15 kDa antigen [Mycobacterium avium subsp. paratuberculosis]
Length=167
Score = 142 bits (359), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 75/142 (53%), Positives = 88/142 (62%), Gaps = 4/142 (2%)
Query 41 QVPAGQTVPAQLQFSAKTLDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASH 100
VP +LQF+A TL G F+G SL GKPAVLWFW PWCP C EAP V +VAA++
Sbjct 26 DVPRAAATDDRLQFTATTLSGAPFNGASLQGKPAVLWFWTPWCPYCNAEAPGVSRVAAAN 85
Query 101 PEVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQQPAYAFVDPHGNV 160
P VTFVGVA +V AM FV+KY + FT L D DG++WA +GV QPAY F G+
Sbjct 86 PGVTFVGVAAHSEVGAMANFVSKYNLN-FTTLNDADGAIWARYGVPWQPAYVFYRADGSS 144
Query 161 DVVRG---RMSQDELTRRVTAL 179
V M QDEL RV AL
Sbjct 145 TFVNNPTSAMPQDELAARVAAL 166
>gi|41409040|ref|NP_961876.1| Mpt53 [Mycobacterium avium subsp. paratuberculosis K-10]
gi|41397399|gb|AAS05259.1| Mpt53 [Mycobacterium avium subsp. paratuberculosis K-10]
gi|336459071|gb|EGO38021.1| Peroxiredoxin [Mycobacterium avium subsp. paratuberculosis S397]
Length=172
Score = 142 bits (358), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 75/142 (53%), Positives = 88/142 (62%), Gaps = 4/142 (2%)
Query 41 QVPAGQTVPAQLQFSAKTLDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASH 100
VP +LQF+A TL G F+G SL GKPAVLWFW PWCP C EAP V +VAA++
Sbjct 31 DVPRAAATDDRLQFTATTLSGAPFNGASLQGKPAVLWFWTPWCPYCNAEAPGVSRVAAAN 90
Query 101 PEVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQQPAYAFVDPHGNV 160
P VTFVGVA +V AM FV+KY + FT L D DG++WA +GV QPAY F G+
Sbjct 91 PGVTFVGVAAHSEVGAMANFVSKYNLN-FTTLNDADGAIWARYGVPWQPAYVFYRADGSS 149
Query 161 DVVRG---RMSQDELTRRVTAL 179
V M QDEL RV AL
Sbjct 150 TFVNNPTSAMPQDELAARVAAL 171
>gi|240169783|ref|ZP_04748442.1| lipoprotein DsbF [Mycobacterium kansasii ATCC 12478]
Length=109
Score = 142 bits (358), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/108 (67%), Positives = 82/108 (76%), Gaps = 0/108 (0%)
Query 75 VLWFWAPWCPTCQGEAPVVGQVAASHPEVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLAD 134
VLWFW PWCP CQ EAP+ VAA+HP VTFVGVA DQV AMQ FV+KY + FTQLAD
Sbjct 2 VLWFWTPWCPKCQHEAPIAADVAAAHPRVTFVGVAARDQVSAMQGFVDKYQLSGFTQLAD 61
Query 135 TDGSVWANFGVTQQPAYAFVDPHGNVDVVRGRMSQDELTRRVTALTSR 182
TDG VW FGVTQQPA+AFV +G+VDVV+G ++Q EL RV L SR
Sbjct 62 TDGVVWTRFGVTQQPAWAFVSANGDVDVVKGSLTQSELNERVDGLVSR 109
>gi|118465076|ref|YP_882904.1| 15 kDa antigen [Mycobacterium avium 104]
gi|254776157|ref|ZP_05217673.1| 15 kDa antigen [Mycobacterium avium subsp. avium ATCC 25291]
gi|118166363|gb|ABK67260.1| 15 kDa antigen [Mycobacterium avium 104]
Length=157
Score = 140 bits (354), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 73/132 (56%), Positives = 85/132 (65%), Gaps = 4/132 (3%)
Query 51 QLQFSAKTLDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHPEVTFVGVAG 110
+LQF+A TL G F+G SL GKPAVLWFW PWCP C EAP V +VAA++P VTFVGVA
Sbjct 26 RLQFTATTLSGAPFNGASLQGKPAVLWFWTPWCPYCNAEAPGVSRVAAANPGVTFVGVAA 85
Query 111 LDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQQPAYAFVDPHGNVDVVRG---RM 167
V AM FV+KY + FT L D DG++WA +GV QPAY F G+ V M
Sbjct 86 HSDVGAMANFVSKYNLN-FTTLNDADGAIWARYGVPWQPAYVFYRADGSSTFVNNPTSAM 144
Query 168 SQDELTRRVTAL 179
QDEL RV AL
Sbjct 145 PQDELAARVAAL 156
>gi|296392757|ref|YP_003657641.1| redoxin domain-containing protein [Segniliparus rotundus DSM
44985]
gi|296179904|gb|ADG96810.1| Redoxin domain protein [Segniliparus rotundus DSM 44985]
Length=170
Score = 140 bits (353), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 67/133 (51%), Positives = 89/133 (67%), Gaps = 3/133 (2%)
Query 49 PAQLQFSAKTLDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHPEVTFVGV 108
P QLQF+A +LDG + G + GKPAV WFW PWCP C E V +VA+ HP V FVGV
Sbjct 38 PDQLQFTATSLDGKEISGATYAGKPAVFWFWTPWCPYCNQEGSFVQKVASEHPNVPFVGV 97
Query 109 AGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQQPAYAFVDPHGNVDVVR--GR 166
A AM++FVNKY + F Q+ D+ G +W FGVT QPA+AFV +G+VD+V+
Sbjct 98 ASRSDQGAMRDFVNKYGL-NFPQIEDSSGEIWGKFGVTWQPAFAFVSSNGDVDMVKFGDL 156
Query 167 MSQDELTRRVTAL 179
+++D+L+ RV AL
Sbjct 157 LTEDQLSDRVGAL 169
>gi|342858275|ref|ZP_08714930.1| 15 kDa antigen [Mycobacterium colombiense CECT 3035]
gi|342133979|gb|EGT87159.1| 15 kDa antigen [Mycobacterium colombiense CECT 3035]
Length=168
Score = 139 bits (349), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/134 (56%), Positives = 87/134 (65%), Gaps = 4/134 (2%)
Query 51 QLQFSAKTLDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHPEVTFVGVAG 110
+LQF+ TL G F+G SL GKPAVLWFWAP+CP C EAP V QVAA++P VTFVGVAG
Sbjct 36 RLQFTGTTLSGAPFNGASLQGKPAVLWFWAPFCPFCNAEAPGVSQVAAANPGVTFVGVAG 95
Query 111 LDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQQPAYAFVDPHGNVDVVRG---RM 167
V A Q FV+KY + FT L D DGS+WA + V QPAY F G+ V M
Sbjct 96 HSDVGAEQAFVSKYGLN-FTNLNDADGSIWARYNVPWQPAYVFYRADGSSTFVNNPTSAM 154
Query 168 SQDELTRRVTALTS 181
SQ EL+ RV AL S
Sbjct 155 SQQELSDRVAALRS 168
>gi|289751544|ref|ZP_06510922.1| LOW QUALITY PROTEIN: soluble secreted antigen MPT53 precursor
[Mycobacterium tuberculosis T92]
gi|289692131|gb|EFD59560.1| LOW QUALITY PROTEIN: soluble secreted antigen MPT53 precursor
[Mycobacterium tuberculosis T92]
Length=174
Score = 137 bits (345), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 70/129 (55%), Positives = 82/129 (64%), Gaps = 4/129 (3%)
Query 51 QLQFSAKTLDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHPEVTFVGVAG 110
+LQF+A TL G F G SL GKPAVLWFW PWCP C EAP + QVAA++P VTFVG+A
Sbjct 41 RLQFTATTLSGAPFDGASLQGKPAVLWFWTPWCPFCNAEAPSLSQVAAANPAVTFVGIAT 100
Query 111 LDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQQPAYAFVDPHGNVDVVRG---RM 167
V AMQ FV+KY + FT L D DG +WA + V QPA+ F G V M
Sbjct 101 RADVGAMQSFVSKYNLN-FTNLNDADGVIWARYNVPWQPAFVFYRADGTSTFVNNPTAAM 159
Query 168 SQDELTRRV 176
SQDEL+ RV
Sbjct 160 SQDELSGRV 168
>gi|183981844|ref|YP_001850135.1| soluble secreted antigen Mpt53 precursor [Mycobacterium marinum
M]
gi|183175170|gb|ACC40280.1| soluble secreted antigen Mpt53 precursor [Mycobacterium marinum
M]
Length=173
Score = 135 bits (340), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/133 (53%), Positives = 83/133 (63%), Gaps = 4/133 (3%)
Query 52 LQFSAKTLDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHPEVTFVGVAGL 111
L F+A TL G F+G SL GKPAVLWFW PWCP C E P QVAA++P VTFVG+A
Sbjct 42 LDFTATTLGGAPFNGASLQGKPAVLWFWTPWCPFCNAEGPAASQVAAANPGVTFVGIAAH 101
Query 112 DQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQQPAYAFVDPHGNVDVVRG---RMS 168
V AMQ FV+KY + FT + D DG++WA + V QPA+ F G+ V MS
Sbjct 102 SDVGAMQGFVSKYGLN-FTNINDADGAIWARYNVPWQPAWVFYRADGSSTFVNNPTSAMS 160
Query 169 QDELTRRVTALTS 181
Q EL RV ALTS
Sbjct 161 QQELADRVAALTS 173
>gi|118617648|ref|YP_905980.1| soluble secreted antigen Mpt53 precursor [Mycobacterium ulcerans
Agy99]
gi|118569758|gb|ABL04509.1| soluble secreted antigen Mpt53 precursor [Mycobacterium ulcerans
Agy99]
Length=157
Score = 134 bits (338), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 70/133 (53%), Positives = 83/133 (63%), Gaps = 4/133 (3%)
Query 52 LQFSAKTLDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHPEVTFVGVAGL 111
L F+A TL G F+G SL GKPAVLWFW PWCP C E P QVAA++P VTFVG+A
Sbjct 26 LDFTATTLGGAPFNGASLQGKPAVLWFWTPWCPFCNAEGPAASQVAAANPGVTFVGIAAH 85
Query 112 DQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQQPAYAFVDPHGNVDVVRG---RMS 168
V AMQ FV+KY + FT + D DG++WA + V QPA+ F G+ V MS
Sbjct 86 SDVGAMQGFVSKYGLN-FTNINDADGAIWARYNVPWQPAWVFYRVDGSSTFVNNPTSAMS 144
Query 169 QDELTRRVTALTS 181
Q EL RV ALTS
Sbjct 145 QQELADRVAALTS 157
>gi|240171731|ref|ZP_04750390.1| soluble secreted antigen MPT53 precursor [Mycobacterium kansasii
ATCC 12478]
Length=173
Score = 134 bits (338), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 72/145 (50%), Positives = 84/145 (58%), Gaps = 4/145 (2%)
Query 40 TQVPAGQTVPAQLQFSAKTLDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAAS 99
T P +L F+A TL G F+G SL GKPAVLWFW PWCP C EAP V VAA
Sbjct 30 TGAPRAMAADDRLNFTATTLSGAPFNGASLQGKPAVLWFWTPWCPFCNAEAPGVSHVAAV 89
Query 100 HPEVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQQPAYAFVDPHGN 159
+P VTFVG+A V AMQ FV KY + FT L D DGS+WA + V QPA+ F G+
Sbjct 90 NPNVTFVGIAAHSDVGAMQGFVTKYGLN-FTNLNDADGSIWARYNVPWQPAWVFYRADGS 148
Query 160 VDVVRG---RMSQDELTRRVTALTS 181
V MS+ EL+ RV L S
Sbjct 149 STFVNNPTSAMSEQELSGRVAELAS 173
>gi|169630324|ref|YP_001703973.1| soluble secreted antigen MPT53 [Mycobacterium abscessus ATCC
19977]
gi|169242291|emb|CAM63319.1| Soluble secreted antigen MPT53 precursor [Mycobacterium abscessus]
Length=178
Score = 133 bits (335), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 65/132 (50%), Positives = 85/132 (65%), Gaps = 4/132 (3%)
Query 52 LQFSAKTLDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHPEVTFVGVAGL 111
L F+ T+ G F+G SL GKP VLWFWA +CP C GE P V V+A++P VTFVG++G
Sbjct 48 LDFTGTTVSGAPFNGASLKGKPVVLWFWAAYCPFCNGEGPHVSAVSAANPRVTFVGISGR 107
Query 112 DQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQQPAYAFVDPHGNVDVVRG---RMS 168
V M+ F+++Y + FT L D DGS+W FGV QPAY F++ +G D V MS
Sbjct 108 GSVGEMEAFISRYNLH-FTNLNDADGSLWRQFGVPWQPAYLFINSNGTSDFVNNPTSSMS 166
Query 169 QDELTRRVTALT 180
+ EL+ RV ALT
Sbjct 167 EQELSDRVKALT 178
>gi|145594086|ref|YP_001158383.1| redoxin domain-containing protein [Salinispora tropica CNB-440]
gi|145303423|gb|ABP54005.1| Redoxin domain protein [Salinispora tropica CNB-440]
Length=193
Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/192 (41%), Positives = 97/192 (51%), Gaps = 14/192 (7%)
Query 2 THSRLIGALTVVAIIVTACGS--------QPKSQPAVAPTGDAAAATQVPAGQT---VPA 50
T +RLI + + + ACG+ P P A T A+ P G+T VP
Sbjct 3 TSTRLIPIALTIVLALAACGNSGDESANADPTPAPTTASTSAPASTAASPTGETAPEVPQ 62
Query 51 QLQFSAKTLDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHPE-VTFVGVA 109
L F+A+T+DG F G SL GKP VLWFWA WCPTC+G A V V + + V VGVA
Sbjct 63 TLDFTARTIDGDTFTGASLAGKPTVLWFWAAWCPTCRGAAKSVAAVQQDNADRVNVVGVA 122
Query 110 GLDQ-VPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQQPAYAFVDPHGNVDVVRGRMS 168
GL AM+ F ++ F LAD G VW F V Q Y +D G V V G +S
Sbjct 123 GLGSGDDAMRRFAQDTGIQGFPHLADDAGEVWQRFEVVSQEHYVLLDSTGTV-VHNGPLS 181
Query 169 QDELTRRVTALT 180
Q +L RV LT
Sbjct 182 QTDLRERVAELT 193
>gi|330469510|ref|YP_004407253.1| redoxin domain-containing protein [Verrucosispora maris AB-18-032]
gi|328812481|gb|AEB46653.1| redoxin domain-containing protein [Verrucosispora maris AB-18-032]
Length=200
Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/178 (40%), Positives = 99/178 (56%), Gaps = 17/178 (9%)
Query 20 CGSQPKSQPAVAPTGDAA---AATQVPAGQ------------TVPAQLQFSAKTLDGHDF 64
CG++ + A P G AA ++ PAG TVP L+F+ KTLDG F
Sbjct 24 CGAEAVAPSASTPAGSAATPASSEATPAGGVVSPGGAPTGPVTVPDTLRFTGKTLDGTAF 83
Query 65 HGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHPE-VTFVGVAGLDQVPAMQEFVNK 123
+L G+P VLWFWAPWC C +A V ++A + V +GVAGL + AM +FV +
Sbjct 84 DAAALAGRPVVLWFWAPWCAACASQAWTVAEIAPGFRDTVPIIGVAGLGEHQAMADFVTE 143
Query 124 YPVKTFTQLADTDGSVWANFGVTQQPAYAFVDPHGNVDVVRGRMSQDELTRRVTALTS 181
+ + TQL D G++W F VT+Q + +D G V V +G + ++LTRRVTAL +
Sbjct 144 FELAPVTQLDDRAGAIWRRFEVTEQSTFVIIDRDGRV-VHQGWLDGEDLTRRVTALAA 200
>gi|159037117|ref|YP_001536370.1| redoxin domain-containing protein [Salinispora arenicola CNS-205]
gi|157915952|gb|ABV97379.1| Redoxin domain protein [Salinispora arenicola CNS-205]
Length=191
Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/185 (43%), Positives = 97/185 (53%), Gaps = 17/185 (9%)
Query 9 ALTVVAIIVTACG----SQPKSQPAVAPTGDAAAATQVPAGQ-------TVPAQLQFSAK 57
ALT+V + +TACG + P APT A+A PA VP L F+A+
Sbjct 11 ALTIV-LALTACGGSGDESASADPTTAPT--TASAPTAPAESPTSGSAPAVPQTLDFTAR 67
Query 58 TLDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASH-PEVTFVGVAGLDQ-VP 115
T+DG F G SL+GKPAVLWFWA WC C+G A V V + V VGVAGL
Sbjct 68 TIDGETFTGASLVGKPAVLWFWAAWCTRCRGAAESVAAVQRDNAARVNLVGVAGLGSGDE 127
Query 116 AMQEFVNKYPVKTFTQLADTDGSVWANFGVTQQPAYAFVDPHGNVDVVRGRMSQDELTRR 175
AM+ F ++ F LAD G VW F V Q Y +D G+V V G +SQ +L RR
Sbjct 128 AMRRFAQDTGIQDFPHLADDAGEVWRRFDVVSQEHYVLLDSAGDV-VHNGPLSQTDLRRR 186
Query 176 VTALT 180
V LT
Sbjct 187 VAELT 191
>gi|238060460|ref|ZP_04605169.1| redoxin domain-containing protein [Micromonospora sp. ATCC 39149]
gi|237882271|gb|EEP71099.1| redoxin domain-containing protein [Micromonospora sp. ATCC 39149]
Length=215
Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/133 (43%), Positives = 80/133 (61%), Gaps = 2/133 (1%)
Query 48 VPAQLQFSAKTLDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHPE-VTFV 106
VP L+F+ TLDG F L G+P VLWFWAPWC TC +A V ++A + + V V
Sbjct 82 VPESLRFTGTTLDGKPFAAADLAGRPVVLWFWAPWCATCASQAWTVAEIAPQYRDRVPIV 141
Query 107 GVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQQPAYAFVDPHGNVDVVRGR 166
GVAGL Q AM++FV ++ + QL D G++W F + +Q + +D G V + +G
Sbjct 142 GVAGLGQQKAMKDFVTEFELGGTLQLDDRAGTLWRRFEIVEQSTFLIIDREGKV-IHQGF 200
Query 167 MSQDELTRRVTAL 179
+ ++LTRRV AL
Sbjct 201 LDGEDLTRRVAAL 213
>gi|302869186|ref|YP_003837823.1| redoxin domain-containing protein [Micromonospora aurantiaca
ATCC 27029]
gi|302572045|gb|ADL48247.1| Redoxin domain protein [Micromonospora aurantiaca ATCC 27029]
Length=195
Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/133 (43%), Positives = 81/133 (61%), Gaps = 2/133 (1%)
Query 48 VPAQLQFSAKTLDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHPE-VTFV 106
VPA L F+ KTLDG F +L G+P VLWFWAPWC TC +A V ++A ++ + V V
Sbjct 61 VPAALSFTGKTLDGTAFDAAALAGRPVVLWFWAPWCATCASQAWTVAEIAPTYRDTVPIV 120
Query 107 GVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQQPAYAFVDPHGNVDVVRGR 166
GVAGL + AM+ FV ++ + TQ+ D G++W F V +Q + +D G V V +G
Sbjct 121 GVAGLGEQKAMKSFVTEFDLGGTTQIDDRAGALWRRFKVAEQSTFVVLDRTGRV-VHQGF 179
Query 167 MSQDELTRRVTAL 179
+ + LTR+V L
Sbjct 180 LDGEALTRQVETL 192
>gi|315504337|ref|YP_004083224.1| redoxin domain-containing protein [Micromonospora sp. L5]
gi|315410956|gb|ADU09073.1| Redoxin domain protein [Micromonospora sp. L5]
Length=195
Score = 104 bits (260), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/129 (42%), Positives = 78/129 (61%), Gaps = 2/129 (1%)
Query 52 LQFSAKTLDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHPE-VTFVGVAG 110
L F+ KTLDG F +L G+P VLWFWAPWC TC +A V ++A ++ + V VGVAG
Sbjct 65 LSFTGKTLDGTAFDAAALAGRPVVLWFWAPWCATCASQAWTVAEIAPTYRDTVPIVGVAG 124
Query 111 LDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQQPAYAFVDPHGNVDVVRGRMSQD 170
L + AM+ FV ++ + TQ+ D G++W F V +Q + +D G V V +G + +
Sbjct 125 LGEQKAMKSFVTEFDLGGTTQIDDRAGALWRRFKVAEQSTFVVLDRTGRV-VHQGFLDGE 183
Query 171 ELTRRVTAL 179
LTR+V L
Sbjct 184 ALTRQVETL 192
>gi|317506826|ref|ZP_07964600.1| redoxin protein [Segniliparus rugosus ATCC BAA-974]
gi|316254900|gb|EFV14196.1| redoxin protein [Segniliparus rugosus ATCC BAA-974]
Length=176
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/129 (39%), Positives = 70/129 (55%), Gaps = 7/129 (5%)
Query 54 FSAKTLDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHPEVTFVGVAGLDQ 113
F A TLDG F+G GKP VLWFWA WCP C EA V + AA++P+V F+G+AG +
Sbjct 42 FHATTLDGKPFNGLDYAGKPVVLWFWASWCPECMQEAQHVARAAAANPQVAFIGIAGKSR 101
Query 114 VPA-------MQEFVNKYPVKTFTQLADTDGSVWANFGVTQQPAYAFVDPHGNVDVVRGR 166
P+ ++ FV KY + TQ+ D G + VT P + F+ P G +
Sbjct 102 APSEGEALAQIRSFVQKYGLGGITQVTDLRGEAFFRSNVTAIPTFVFLKPTGEASSLSDV 161
Query 167 MSQDELTRR 175
+S+ L+ R
Sbjct 162 VSEQALSER 170
>gi|119716307|ref|YP_923272.1| redoxin domain-containing protein [Nocardioides sp. JS614]
gi|119536968|gb|ABL81585.1| Redoxin domain protein [Nocardioides sp. JS614]
Length=169
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/138 (41%), Positives = 71/138 (52%), Gaps = 4/138 (2%)
Query 43 PAGQTVPAQLQFSAKTLDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP- 101
P G A L FSA TL G F G L G+PAVLWFWAPWC TC+ ++ V ++A +
Sbjct 33 PIGMGKFADLDFSATTLTGETFDGAELEGEPAVLWFWAPWCATCRAQSVNVSRLAEQYDG 92
Query 102 EVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQQPAYAFVDPHGNVD 161
EV VGV GLD A++ ++ P T L D G VW F VT Q Y + G +
Sbjct 93 EVAVVGVGGLDSAAAIERVADQIP--DVTHLVDPQGEVWRQFRVTAQSTYTVIAADGEI- 149
Query 162 VVRGRMSQDELTRRVTAL 179
+ G + EL V L
Sbjct 150 ISEGYLDDGELNDLVAQL 167
>gi|240171057|ref|ZP_04749716.1| putative lipoprotein [Mycobacterium kansasii ATCC 12478]
Length=75
Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 54/75 (72%), Gaps = 0/75 (0%)
Query 108 VAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQQPAYAFVDPHGNVDVVRGRM 167
+A DQ+PAM++FV +Y + F QLAD+D ++WA FGV QPA+AFV G++DVV G +
Sbjct 1 MAAQDQLPAMRQFVARYQLSAFPQLADSDAAIWARFGVVAQPAFAFVGAAGHIDVVEGPL 60
Query 168 SQDELTRRVTALTSR 182
+Q ELT RV AL +
Sbjct 61 TQLELTNRVAALAGQ 75
>gi|146296080|ref|YP_001179851.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
allergen [Caldicellulosiruptor saccharolyticus DSM 8903]
gi|145409656|gb|ABP66660.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
allergen [Caldicellulosiruptor saccharolyticus DSM 8903]
Length=170
Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/130 (30%), Positives = 66/130 (51%), Gaps = 2/130 (1%)
Query 48 VPAQLQFSAKTLDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHPEVTFVG 107
V + F +++DG ++ S GK +L F+A WCP C+ E P + ++ ++ +G
Sbjct 36 VNGAVDFKLESVDGKEYSISSFRGKKVILNFFATWCPPCRAEIPDFEKFHQNNKDIVLIG 95
Query 108 VAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQQPAYAFVDPHGNVDVVR-GR 166
V + ++EF+N V ++ L D DG + +NFG+ P +D G + G
Sbjct 96 VNIQEDKNTVKEFLNSMGV-SYLVLLDKDGKIASNFGIEGIPTTFLLDKSGRIIAKNVGM 154
Query 167 MSQDELTRRV 176
M+ DEL + V
Sbjct 155 MTYDELDKFV 164
>gi|310641368|ref|YP_003946126.1| thioredoxin family protein [Paenibacillus polymyxa SC2]
gi|309246318|gb|ADO55885.1| Thioredoxin family protein [Paenibacillus polymyxa SC2]
gi|343096448|emb|CCC84657.1| thiol-disulfide oxidoreductase resA [Paenibacillus polymyxa M1]
Length=210
Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/156 (27%), Positives = 81/156 (52%), Gaps = 8/156 (5%)
Query 31 APTGDAAAATQVPAGQTVPAQLQFSAKTLDGHDFHGESLLGKPAVLWFWAPWCPTCQGEA 90
A + A ++ GQ +P+ + K L+G + +L K ++ FWA WC C+ EA
Sbjct 57 AESAAAEVIKRIKPGQQLPSMI---LKGLNGKSYDVGALRNKAMIISFWASWCDPCRLEA 113
Query 91 PVVGQVAASHP---EVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQ 147
P++ ++ + + +V + V D++ +Q+F ++ F L D G+++ FG
Sbjct 114 PMLNELYSKYKHDVDVYGINVTRYDRLEDVQKFSRSLALR-FPILLDEQGALFEQFGGVA 172
Query 148 QPAYAFVDPHGNV-DVVRGRMSQDELTRRVTALTSR 182
P + +D HG V +++ G +S+ EL ++ AL+ +
Sbjct 173 FPTHVTIDDHGRVREIIIGMLSERELECKIEALSKK 208
>gi|320333754|ref|YP_004170465.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
allergen [Deinococcus maricopensis DSM 21211]
gi|319755043|gb|ADV66800.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
allergen [Deinococcus maricopensis DSM 21211]
Length=189
Score = 74.3 bits (181), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/131 (33%), Positives = 70/131 (54%), Gaps = 5/131 (3%)
Query 53 QFSAKTLDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHPE--VTFVGVA- 109
F+ K L+G+ SL G+P +L FWA WCP C+ EAP++ VA + VGV
Sbjct 56 NFTLKDLNGNTVTLASLRGRPVLLNFWASWCPPCRNEAPLLSDVARQQRAQGLAIVGVIY 115
Query 110 GLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQQPAYAFVDPHGNVDV-VRGRMS 168
D V A+++F+ +Y + + + D + ++GV P F+D G + VR ++
Sbjct 116 ADDNVSALRDFIGEYNL-AYPNVRDPGSRIAIDYGVAAVPETFFIDKTGVIRAHVRQEVT 174
Query 169 QDELTRRVTAL 179
+D LTR++ +
Sbjct 175 RDVLTRQLKTI 185
>gi|269837447|ref|YP_003319675.1| Redoxin domain-containing protein [Sphaerobacter thermophilus
DSM 20745]
gi|269786710|gb|ACZ38853.1| Redoxin domain protein [Sphaerobacter thermophilus DSM 20745]
Length=196
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/106 (40%), Positives = 56/106 (53%), Gaps = 2/106 (1%)
Query 54 FSAKTLDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHPEVT-FVGVAGLD 112
FS +TLDG E GK VL FW WCP C+ EAPV+ AA+ E T VG+ D
Sbjct 65 FSLQTLDGQQISLEHFRGKTVVLNFWGSWCPPCEDEAPVLRDFAATLDENTVIVGIDIWD 124
Query 113 QVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQQPAYAFVDPHG 158
Q A Q F+ K+ + T+ D +G ++GV+ P F+ P G
Sbjct 125 QPEAAQAFLEKHDL-TYPNAVDDNGRTTIDYGVSGVPETFFIGPDG 169
>gi|308068488|ref|YP_003870093.1| thioredoxin-like thiol-disulfide isomerase [Paenibacillus polymyxa
E681]
gi|305857767|gb|ADM69555.1| thioredoxin-like thiol-disulfide isomerase [Paenibacillus polymyxa
E681]
Length=214
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/156 (27%), Positives = 77/156 (50%), Gaps = 8/156 (5%)
Query 31 APTGDAAAATQVPAGQTVPAQLQFSAKTLDGHDFHGESLLGKPAVLWFWAPWCPTCQGEA 90
A T ++ GQ +P+ + K L+G + + K V+ FWA WC C+ EA
Sbjct 56 AKTHAVEVMKKIKPGQRLPSMI---LKGLNGKSYDVGATRNKALVISFWASWCDPCRLEA 112
Query 91 PVVGQVAASHP---EVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQ 147
P++ ++ + + +V + V D++ +Q+F ++ F L D G+++ FG
Sbjct 113 PMLNELYSKYKDDVDVYGINVTRYDRLEDVQKFSRSLDLQ-FPILLDEQGALFERFGGVA 171
Query 148 QPAYAFVDPHGNV-DVVRGRMSQDELTRRVTALTSR 182
P + VD HG V +++ G + + EL R++ L +
Sbjct 172 FPTHVLVDHHGQVREIIIGMLDEQELERKIKTLQKK 207
>gi|317505215|ref|ZP_07963147.1| conserved hypothetical protein [Prevotella salivae DSM 15606]
gi|315663644|gb|EFV03379.1| conserved hypothetical protein [Prevotella salivae DSM 15606]
Length=180
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/181 (28%), Positives = 86/181 (48%), Gaps = 12/181 (6%)
Query 7 IGALTVVAIIVTACGSQPKSQPAVAPTGDAAAATQVPAGQTVPAQLQFSAKTLDGHDFHG 66
+ L +VA+ + +Q A V AG P F KT+DG F
Sbjct 3 LKRLLIVAVALIGSVVIANAQENNTDEDSKYAVEMVKAGTKAP---NFQLKTVDGKSFKL 59
Query 67 ESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHPE--VTFVGVAGLDQVPAMQEFVNKY 124
SL GK VL FWA WCP C+ +AP + ++ + V FVGV+ + ++ + KY
Sbjct 60 SSLKGKVVVLDFWASWCPDCRKDAPNIVRMYREFKDKGVVFVGVSFDTEKANWEKAIEKY 119
Query 125 PVKTFTQLAD----TDGSVWANFGVTQQPAYAFVDPHGNVDVVRGRMSQDELTRRVTALT 180
++ +T +++ + ++ +GV PA +D GN VV + +++ +++T LT
Sbjct 120 GME-YTAVSELKKMRESTIAKQYGVKWIPAMVVIDKKGN--VVLSTVLSEKVEKKLTELT 176
Query 181 S 181
+
Sbjct 177 A 177
>gi|332296581|ref|YP_004438504.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
allergen [Thermodesulfobium narugense DSM 14796]
gi|332179684|gb|AEE15373.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
allergen [Thermodesulfobium narugense DSM 14796]
Length=182
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/162 (30%), Positives = 79/162 (49%), Gaps = 14/162 (8%)
Query 6 LIGALTVVAII-VTACGSQPKSQPAVAPTGDAAAATQVPAGQTVPAQLQFSAKTLDGHDF 64
++ L ++ I+ ++ CG + + + T + Q+ G+ P F K + G +
Sbjct 4 ILFTLLLIGILALSGCGQRVEQKE----TTRNESENQL-IGKLAP---NFKLKDMAGFEV 55
Query 65 HGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHPEVTFV-GVAGLDQVPAMQEFVNK 123
+ GKP +L FWA WCP C+ E P + + S E V G+ D+ + +F++
Sbjct 56 NLSQYRGKPILLVFWATWCPHCRVEMPQINNLYKSFKEKVLVFGINEEDEESRILKFMSD 115
Query 124 YPVKTFTQLADTDGSVWANFGVTQQPAYAFVDPHG---NVDV 162
YP+ +F L D +G V + V PA FVDP G +VDV
Sbjct 116 YPL-SFPILPDKNGEVARLYKVNSIPAVFFVDPSGVIRDVDV 156
>gi|295695001|ref|YP_003588239.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
allergen [Bacillus tusciae DSM 2912]
gi|295410603|gb|ADG05095.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
allergen [Bacillus tusciae DSM 2912]
Length=187
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/133 (32%), Positives = 67/133 (51%), Gaps = 7/133 (5%)
Query 54 FSAKTLDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASH-PEVTFVGVAGL- 111
F+ KT DG + GKP L FWA WCP CQ E P + ++ + ++ F G+
Sbjct 55 FTLKTFDGQAVTLSQMKGKPVFLNFWASWCPPCQAETPDLVEMHKKYGDKIAFYGINLTQ 114
Query 112 --DQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQQPAYAFVDPHGN-VDVVRGRMS 168
DQ A+ +F+ Y + + L+D +G V + V P F+ P G V++V+G M+
Sbjct 115 QDDQQKAL-DFIKNYKI-DYPVLSDAEGKVSDLYRVQAIPTSVFIAPDGKIVELVQGLMT 172
Query 169 QDELTRRVTALTS 181
+ ++ R L S
Sbjct 173 KQDMDRLFGELAS 185
Lambda K H
0.318 0.131 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 164464225230
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40