BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1680
Length=274
Score E
Sequences producing significant alignments: (Bits) Value
gi|308379006|ref|ZP_07668883.1| hypothetical protein TMJG_03111 ... 561 4e-158
gi|15608818|ref|NP_216196.1| hypothetical protein Rv1680 [Mycoba... 561 5e-158
gi|339631734|ref|YP_004723376.1| hypothetical protein MAF_16970 ... 560 8e-158
gi|31792866|ref|NP_855359.1| hypothetical protein Mb1707 [Mycoba... 559 2e-157
gi|289761835|ref|ZP_06521213.1| conserved hypothetical protein [... 546 2e-153
gi|289750236|ref|ZP_06509614.1| LOW QUALITY PROTEIN: hypothetica... 517 8e-145
gi|240171257|ref|ZP_04749916.1| hypothetical protein MkanA1_1823... 509 2e-142
gi|120406826|ref|YP_956655.1| hypothetical protein Mvan_5884 [My... 449 2e-124
gi|88856677|ref|ZP_01131333.1| hypothetical protein A20C1_10860 ... 339 2e-91
gi|296272718|ref|YP_003655349.1| hypothetical protein Arnit_1183... 239 3e-61
gi|237753221|ref|ZP_04583701.1| conserved hypothetical protein [... 239 3e-61
gi|345469269|dbj|BAK70720.1| conserved hypothetical protein [Arc... 234 1e-59
gi|254457196|ref|ZP_05070624.1| conserved hypothetical protein [... 232 4e-59
gi|242308925|ref|ZP_04808080.1| conserved hypothetical protein [... 224 1e-56
gi|253827127|ref|ZP_04870012.1| ABC-type phosphate/phosphonate t... 216 3e-54
gi|296127660|ref|YP_003634912.1| hypothetical protein Bmur_2644 ... 209 3e-52
gi|315637011|ref|ZP_07892235.1| conserved hypothetical protein [... 208 9e-52
gi|32267013|ref|NP_861045.1| hypothetical protein HH1514 [Helico... 204 1e-50
gi|162449376|ref|YP_001611743.1| hypothetical protein sce1106 [S... 204 1e-50
gi|313144478|ref|ZP_07806671.1| conserved hypothetical protein [... 194 9e-48
gi|68272011|gb|AAY89286.1| hypothetical protein [uncultured bact... 186 5e-45
gi|333913942|ref|YP_004487674.1| hypothetical protein DelCs14_23... 172 7e-41
gi|160899939|ref|YP_001565521.1| hypothetical protein Daci_4507 ... 169 3e-40
gi|339482745|ref|YP_004694531.1| hypothetical protein Nit79A3_12... 166 3e-39
gi|337748575|ref|YP_004642737.1| phosphonate ABC transporter per... 162 3e-38
gi|256389766|ref|YP_003111330.1| hypothetical protein Caci_0551 ... 159 4e-37
gi|332529282|ref|ZP_08405245.1| hypothetical protein HGR_05211 [... 156 3e-36
gi|335044708|ref|ZP_08537731.1| hypothetical protein HMPREF9124_... 156 3e-36
gi|34558129|ref|NP_907944.1| hypothetical protein WS1830 [Woline... 154 1e-35
gi|227873648|ref|ZP_03991885.1| phosphonate ABC superfamily ATP ... 153 3e-35
gi|297587641|ref|ZP_06946285.1| phosphonate ABC superfamily ATP ... 153 3e-35
gi|160947213|ref|ZP_02094380.1| hypothetical protein PEPMIC_0114... 151 1e-34
gi|329766788|ref|ZP_08258318.1| hypothetical protein HMPREF0428_... 149 3e-34
gi|241889545|ref|ZP_04776844.1| putative phosphonate ABC transpo... 149 4e-34
gi|169824084|ref|YP_001691695.1| putative phosphonate ABC transp... 140 2e-31
gi|303235265|ref|ZP_07321883.1| conserved hypothetical protein [... 138 1e-30
gi|302381077|ref|ZP_07269537.1| conserved hypothetical protein [... 137 2e-30
gi|341952729|gb|EGT79250.1| putative phosphonate ABC transporter... 137 2e-30
gi|341950213|gb|EGT76802.1| putative phosphonate ABC transporter... 136 3e-30
gi|342904065|ref|ZP_08725867.1| putative phosphonate ABC transpo... 134 1e-29
gi|341950631|gb|EGT77218.1| putative phosphonate ABC transporter... 134 2e-29
gi|154148910|ref|YP_001406724.1| hypothetical protein CHAB381_11... 132 6e-29
gi|341951859|gb|EGT78411.1| putative phosphonate ABC transporter... 132 7e-29
gi|300787605|ref|YP_003767896.1| ABC transporter substrate-bindi... 124 1e-26
gi|71907455|ref|YP_285042.1| phosphonate-binding periplasmic pro... 94.0 2e-17
gi|222111204|ref|YP_002553468.1| phosphonate ABC transporter per... 93.6 3e-17
gi|149924227|ref|ZP_01912601.1| Phosphonate-binding periplasmic ... 93.2 3e-17
gi|160898779|ref|YP_001564361.1| phosphonate ABC transporter per... 93.2 3e-17
gi|121594062|ref|YP_985958.1| phosphonate ABC transporter peripl... 93.2 4e-17
gi|239815055|ref|YP_002943965.1| phosphonate ABC transporter per... 92.4 7e-17
>gi|308379006|ref|ZP_07668883.1| hypothetical protein TMJG_03111 [Mycobacterium tuberculosis SUMu010]
gi|308358495|gb|EFP47346.1| hypothetical protein TMJG_03111 [Mycobacterium tuberculosis SUMu010]
Length=324
Score = 561 bits (1446), Expect = 4e-158, Method: Compositional matrix adjust.
Identities = 274/274 (100%), Positives = 274/274 (100%), Gaps = 0/274 (0%)
Query 1 MSTEPLVVGAVAYTPNVVPIWEGIRGYFQDSESPDTQMDFVLYSNYARLVDSLIAGHIDI 60
MSTEPLVVGAVAYTPNVVPIWEGIRGYFQDSESPDTQMDFVLYSNYARLVDSLIAGHIDI
Sbjct 51 MSTEPLVVGAVAYTPNVVPIWEGIRGYFQDSESPDTQMDFVLYSNYARLVDSLIAGHIDI 110
Query 61 AWNTNLAYVRTVLQTGGRCTPLAQRDTDVDYTTVFVAHAGSDLHGAKDIAGKRLALGSAD 120
AWNTNLAYVRTVLQTGGRCTPLAQRDTDVDYTTVFVAHAGSDLHGAKDIAGKRLALGSAD
Sbjct 111 AWNTNLAYVRTVLQTGGRCTPLAQRDTDVDYTTVFVAHAGSDLHGAKDIAGKRLALGSAD 170
Query 121 SAHAAILPLYYLRRAGIAESDLQVIRFDTDIGKHGDTGRSELDAVDAVLAGEADVAAIGS 180
SAHAAILPLYYLRRAGIAESDLQVIRFDTDIGKHGDTGRSELDAVDAVLAGEADVAAIGS
Sbjct 171 SAHAAILPLYYLRRAGIAESDLQVIRFDTDIGKHGDTGRSELDAVDAVLAGEADVAAIGS 230
Query 181 STWAAMGAAELMGESLTEVWRTDGYCHCMFTALDTLPAERYQPWLDRLLAMSWDDSEHRK 240
STWAAMGAAELMGESLTEVWRTDGYCHCMFTALDTLPAERYQPWLDRLLAMSWDDSEHRK
Sbjct 231 STWAAMGAAELMGESLTEVWRTDGYCHCMFTALDTLPAERYQPWLDRLLAMSWDDSEHRK 290
Query 241 ILELEGLRRWVPPHLDGYKPLFEAVQEQGIDPRW 274
ILELEGLRRWVPPHLDGYKPLFEAVQEQGIDPRW
Sbjct 291 ILELEGLRRWVPPHLDGYKPLFEAVQEQGIDPRW 324
>gi|15608818|ref|NP_216196.1| hypothetical protein Rv1680 [Mycobacterium tuberculosis H37Rv]
gi|15841137|ref|NP_336174.1| hypothetical protein MT1720 [Mycobacterium tuberculosis CDC1551]
gi|121637587|ref|YP_977810.1| hypothetical protein BCG_1718 [Mycobacterium bovis BCG str. Pasteur
1173P2]
70 more sequence titles
Length=274
Score = 561 bits (1445), Expect = 5e-158, Method: Compositional matrix adjust.
Identities = 274/274 (100%), Positives = 274/274 (100%), Gaps = 0/274 (0%)
Query 1 MSTEPLVVGAVAYTPNVVPIWEGIRGYFQDSESPDTQMDFVLYSNYARLVDSLIAGHIDI 60
MSTEPLVVGAVAYTPNVVPIWEGIRGYFQDSESPDTQMDFVLYSNYARLVDSLIAGHIDI
Sbjct 1 MSTEPLVVGAVAYTPNVVPIWEGIRGYFQDSESPDTQMDFVLYSNYARLVDSLIAGHIDI 60
Query 61 AWNTNLAYVRTVLQTGGRCTPLAQRDTDVDYTTVFVAHAGSDLHGAKDIAGKRLALGSAD 120
AWNTNLAYVRTVLQTGGRCTPLAQRDTDVDYTTVFVAHAGSDLHGAKDIAGKRLALGSAD
Sbjct 61 AWNTNLAYVRTVLQTGGRCTPLAQRDTDVDYTTVFVAHAGSDLHGAKDIAGKRLALGSAD 120
Query 121 SAHAAILPLYYLRRAGIAESDLQVIRFDTDIGKHGDTGRSELDAVDAVLAGEADVAAIGS 180
SAHAAILPLYYLRRAGIAESDLQVIRFDTDIGKHGDTGRSELDAVDAVLAGEADVAAIGS
Sbjct 121 SAHAAILPLYYLRRAGIAESDLQVIRFDTDIGKHGDTGRSELDAVDAVLAGEADVAAIGS 180
Query 181 STWAAMGAAELMGESLTEVWRTDGYCHCMFTALDTLPAERYQPWLDRLLAMSWDDSEHRK 240
STWAAMGAAELMGESLTEVWRTDGYCHCMFTALDTLPAERYQPWLDRLLAMSWDDSEHRK
Sbjct 181 STWAAMGAAELMGESLTEVWRTDGYCHCMFTALDTLPAERYQPWLDRLLAMSWDDSEHRK 240
Query 241 ILELEGLRRWVPPHLDGYKPLFEAVQEQGIDPRW 274
ILELEGLRRWVPPHLDGYKPLFEAVQEQGIDPRW
Sbjct 241 ILELEGLRRWVPPHLDGYKPLFEAVQEQGIDPRW 274
>gi|339631734|ref|YP_004723376.1| hypothetical protein MAF_16970 [Mycobacterium africanum GM041182]
gi|339331090|emb|CCC26768.1| hypothetical protein MAF_16970 [Mycobacterium africanum GM041182]
Length=274
Score = 560 bits (1443), Expect = 8e-158, Method: Compositional matrix adjust.
Identities = 273/274 (99%), Positives = 273/274 (99%), Gaps = 0/274 (0%)
Query 1 MSTEPLVVGAVAYTPNVVPIWEGIRGYFQDSESPDTQMDFVLYSNYARLVDSLIAGHIDI 60
MSTEPLVVGAVAYTPNVVPIWEGIRGYFQDSESPDTQMDFVLYSNYARLVDSLIAGHIDI
Sbjct 1 MSTEPLVVGAVAYTPNVVPIWEGIRGYFQDSESPDTQMDFVLYSNYARLVDSLIAGHIDI 60
Query 61 AWNTNLAYVRTVLQTGGRCTPLAQRDTDVDYTTVFVAHAGSDLHGAKDIAGKRLALGSAD 120
AWNTNLAYVRTVLQTGGRCTPLAQRDTDVDYTTVFVAHAGSDLHGAKDIAGKRLALGSAD
Sbjct 61 AWNTNLAYVRTVLQTGGRCTPLAQRDTDVDYTTVFVAHAGSDLHGAKDIAGKRLALGSAD 120
Query 121 SAHAAILPLYYLRRAGIAESDLQVIRFDTDIGKHGDTGRSELDAVDAVLAGEADVAAIGS 180
SAHAAILP YYLRRAGIAESDLQVIRFDTDIGKHGDTGRSELDAVDAVLAGEADVAAIGS
Sbjct 121 SAHAAILPFYYLRRAGIAESDLQVIRFDTDIGKHGDTGRSELDAVDAVLAGEADVAAIGS 180
Query 181 STWAAMGAAELMGESLTEVWRTDGYCHCMFTALDTLPAERYQPWLDRLLAMSWDDSEHRK 240
STWAAMGAAELMGESLTEVWRTDGYCHCMFTALDTLPAERYQPWLDRLLAMSWDDSEHRK
Sbjct 181 STWAAMGAAELMGESLTEVWRTDGYCHCMFTALDTLPAERYQPWLDRLLAMSWDDSEHRK 240
Query 241 ILELEGLRRWVPPHLDGYKPLFEAVQEQGIDPRW 274
ILELEGLRRWVPPHLDGYKPLFEAVQEQGIDPRW
Sbjct 241 ILELEGLRRWVPPHLDGYKPLFEAVQEQGIDPRW 274
>gi|31792866|ref|NP_855359.1| hypothetical protein Mb1707 [Mycobacterium bovis AF2122/97]
gi|31618456|emb|CAD96374.1| HYPOTHETICAL PROTEIN Mb1707 [Mycobacterium bovis AF2122/97]
Length=274
Score = 559 bits (1440), Expect = 2e-157, Method: Compositional matrix adjust.
Identities = 273/274 (99%), Positives = 273/274 (99%), Gaps = 0/274 (0%)
Query 1 MSTEPLVVGAVAYTPNVVPIWEGIRGYFQDSESPDTQMDFVLYSNYARLVDSLIAGHIDI 60
MSTEPLVVGAVAYTPNVVPIWEGIRGYFQDSESPDTQMDFVLYSNYARLVDSLIAGHIDI
Sbjct 1 MSTEPLVVGAVAYTPNVVPIWEGIRGYFQDSESPDTQMDFVLYSNYARLVDSLIAGHIDI 60
Query 61 AWNTNLAYVRTVLQTGGRCTPLAQRDTDVDYTTVFVAHAGSDLHGAKDIAGKRLALGSAD 120
AWNTNLAYVRTVLQTGGRCTPLAQRDTDVDYTTVFVAHAGSDLHGAKDIAGKRLALGSAD
Sbjct 61 AWNTNLAYVRTVLQTGGRCTPLAQRDTDVDYTTVFVAHAGSDLHGAKDIAGKRLALGSAD 120
Query 121 SAHAAILPLYYLRRAGIAESDLQVIRFDTDIGKHGDTGRSELDAVDAVLAGEADVAAIGS 180
SAHAAILPLYYLRRAGIAESDLQVIRFDTDIGKHGDTGRSELDAVDAVLAGEADVAAIGS
Sbjct 121 SAHAAILPLYYLRRAGIAESDLQVIRFDTDIGKHGDTGRSELDAVDAVLAGEADVAAIGS 180
Query 181 STWAAMGAAELMGESLTEVWRTDGYCHCMFTALDTLPAERYQPWLDRLLAMSWDDSEHRK 240
STWAAMGAAELMGESLTEVWRTDGYCHCMFTALDTLPAERYQPWLDRLL MSWDDSEHRK
Sbjct 181 STWAAMGAAELMGESLTEVWRTDGYCHCMFTALDTLPAERYQPWLDRLLGMSWDDSEHRK 240
Query 241 ILELEGLRRWVPPHLDGYKPLFEAVQEQGIDPRW 274
ILELEGLRRWVPPHLDGYKPLFEAVQEQGIDPRW
Sbjct 241 ILELEGLRRWVPPHLDGYKPLFEAVQEQGIDPRW 274
>gi|289761835|ref|ZP_06521213.1| conserved hypothetical protein [Mycobacterium tuberculosis GM
1503]
gi|289709341|gb|EFD73357.1| conserved hypothetical protein [Mycobacterium tuberculosis GM
1503]
Length=267
Score = 546 bits (1406), Expect = 2e-153, Method: Compositional matrix adjust.
Identities = 266/267 (99%), Positives = 267/267 (100%), Gaps = 0/267 (0%)
Query 8 VGAVAYTPNVVPIWEGIRGYFQDSESPDTQMDFVLYSNYARLVDSLIAGHIDIAWNTNLA 67
+GAVAYTPNVVPIWEGIRGYFQDSESPDTQMDFVLYSNYARLVDSLIAGHIDIAWNTNLA
Sbjct 1 MGAVAYTPNVVPIWEGIRGYFQDSESPDTQMDFVLYSNYARLVDSLIAGHIDIAWNTNLA 60
Query 68 YVRTVLQTGGRCTPLAQRDTDVDYTTVFVAHAGSDLHGAKDIAGKRLALGSADSAHAAIL 127
YVRTVLQTGGRCTPLAQRDTDVDYTTVFVAHAGSDLHGAKDIAGKRLALGSADSAHAAIL
Sbjct 61 YVRTVLQTGGRCTPLAQRDTDVDYTTVFVAHAGSDLHGAKDIAGKRLALGSADSAHAAIL 120
Query 128 PLYYLRRAGIAESDLQVIRFDTDIGKHGDTGRSELDAVDAVLAGEADVAAIGSSTWAAMG 187
PLYYLRRAGIAESDLQVIRFDTDIGKHGDTGRSELDAVDAVLAGEADVAAIGSSTWAAMG
Sbjct 121 PLYYLRRAGIAESDLQVIRFDTDIGKHGDTGRSELDAVDAVLAGEADVAAIGSSTWAAMG 180
Query 188 AAELMGESLTEVWRTDGYCHCMFTALDTLPAERYQPWLDRLLAMSWDDSEHRKILELEGL 247
AAELMGESLTEVWRTDGYCHCMFTALDTLPAERYQPWLDRLLAMSWDDSEHRKILELEGL
Sbjct 181 AAELMGESLTEVWRTDGYCHCMFTALDTLPAERYQPWLDRLLAMSWDDSEHRKILELEGL 240
Query 248 RRWVPPHLDGYKPLFEAVQEQGIDPRW 274
RRWVPPHLDGYKPLFEAVQEQGIDPRW
Sbjct 241 RRWVPPHLDGYKPLFEAVQEQGIDPRW 267
>gi|289750236|ref|ZP_06509614.1| LOW QUALITY PROTEIN: hypothetical protein TBDG_03272 [Mycobacterium
tuberculosis T92]
gi|289690823|gb|EFD58252.1| LOW QUALITY PROTEIN: hypothetical protein TBDG_03272 [Mycobacterium
tuberculosis T92]
Length=274
Score = 517 bits (1331), Expect = 8e-145, Method: Compositional matrix adjust.
Identities = 252/253 (99%), Positives = 253/253 (100%), Gaps = 0/253 (0%)
Query 22 EGIRGYFQDSESPDTQMDFVLYSNYARLVDSLIAGHIDIAWNTNLAYVRTVLQTGGRCTP 81
+GIRGYFQDSESPDTQMDFVLYSNYARLVDSLIAGHIDIAWNTNLAYVRTVLQTGGRCTP
Sbjct 22 KGIRGYFQDSESPDTQMDFVLYSNYARLVDSLIAGHIDIAWNTNLAYVRTVLQTGGRCTP 81
Query 82 LAQRDTDVDYTTVFVAHAGSDLHGAKDIAGKRLALGSADSAHAAILPLYYLRRAGIAESD 141
LAQRDTDVDYTTVFVAHAGSDLHGAKDIAGKRLALGSADSAHAAILPLYYLRRAGIAESD
Sbjct 82 LAQRDTDVDYTTVFVAHAGSDLHGAKDIAGKRLALGSADSAHAAILPLYYLRRAGIAESD 141
Query 142 LQVIRFDTDIGKHGDTGRSELDAVDAVLAGEADVAAIGSSTWAAMGAAELMGESLTEVWR 201
LQVIRFDTDIGKHGDTGRSELDAVDAVLAGEADVAAIGSSTWAAMGAAELMGESLTEVWR
Sbjct 142 LQVIRFDTDIGKHGDTGRSELDAVDAVLAGEADVAAIGSSTWAAMGAAELMGESLTEVWR 201
Query 202 TDGYCHCMFTALDTLPAERYQPWLDRLLAMSWDDSEHRKILELEGLRRWVPPHLDGYKPL 261
TDGYCHCMFTALDTLPAERYQPWLDRLLAMSWDDSEHRKILELEGLRRWVPPHLDGYKPL
Sbjct 202 TDGYCHCMFTALDTLPAERYQPWLDRLLAMSWDDSEHRKILELEGLRRWVPPHLDGYKPL 261
Query 262 FEAVQEQGIDPRW 274
FEAVQEQGIDPRW
Sbjct 262 FEAVQEQGIDPRW 274
>gi|240171257|ref|ZP_04749916.1| hypothetical protein MkanA1_18231 [Mycobacterium kansasii ATCC
12478]
Length=274
Score = 509 bits (1310), Expect = 2e-142, Method: Compositional matrix adjust.
Identities = 249/274 (91%), Positives = 257/274 (94%), Gaps = 0/274 (0%)
Query 1 MSTEPLVVGAVAYTPNVVPIWEGIRGYFQDSESPDTQMDFVLYSNYARLVDSLIAGHIDI 60
MSTEPLVVGAVAYTPNVVPIWEGIR YF+DS +PDT+MDFVLYSNY RLVDSLIAGHIDI
Sbjct 1 MSTEPLVVGAVAYTPNVVPIWEGIRSYFRDSRNPDTEMDFVLYSNYGRLVDSLIAGHIDI 60
Query 61 AWNTNLAYVRTVLQTGGRCTPLAQRDTDVDYTTVFVAHAGSDLHGAKDIAGKRLALGSAD 120
AWNTNLAYVRTVLQTGG CT LAQRDTDVDYTTVFVA AGS L G DIAGKRLALGSAD
Sbjct 61 AWNTNLAYVRTVLQTGGHCTALAQRDTDVDYTTVFVARAGSGLQGPGDIAGKRLALGSAD 120
Query 121 SAHAAILPLYYLRRAGIAESDLQVIRFDTDIGKHGDTGRSELDAVDAVLAGEADVAAIGS 180
SAHAAILPLYYLRRA IAE+DL VIRF+TDIGKHGDTGRSELDAVDAVLAGEADVAAIGS
Sbjct 121 SAHAAILPLYYLRRADIAETDLHVIRFNTDIGKHGDTGRSELDAVDAVLAGEADVAAIGS 180
Query 181 STWAAMGAAELMGESLTEVWRTDGYCHCMFTALDTLPAERYQPWLDRLLAMSWDDSEHRK 240
STWAAMGAAELMGESL EVWRT+GYCHCMFTALDTL AERYQPWLDRLLAM WD+ EHRK
Sbjct 181 STWAAMGAAELMGESLAEVWRTEGYCHCMFTALDTLAAERYQPWLDRLLAMDWDNPEHRK 240
Query 241 ILELEGLRRWVPPHLDGYKPLFEAVQEQGIDPRW 274
ILELEGLRRWV PHLDGYKPLFEAV+EQGIDPRW
Sbjct 241 ILELEGLRRWVAPHLDGYKPLFEAVEEQGIDPRW 274
>gi|120406826|ref|YP_956655.1| hypothetical protein Mvan_5884 [Mycobacterium vanbaalenii PYR-1]
gi|119959644|gb|ABM16649.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=273
Score = 449 bits (1155), Expect = 2e-124, Method: Compositional matrix adjust.
Identities = 215/272 (80%), Positives = 237/272 (88%), Gaps = 0/272 (0%)
Query 3 TEPLVVGAVAYTPNVVPIWEGIRGYFQDSESPDTQMDFVLYSNYARLVDSLIAGHIDIAW 62
++PL+VGAVAYTPNVVPIWEGIR YF + PD MDFVLYSNY RLV SLIAGHID+AW
Sbjct 2 SDPLIVGAVAYTPNVVPIWEGIREYFDSAGEPDAAMDFVLYSNYGRLVTSLIAGHIDVAW 61
Query 63 NTNLAYVRTVLQTGGRCTPLAQRDTDVDYTTVFVAHAGSDLHGAKDIAGKRLALGSADSA 122
NTNLAYVRTV+QT G C LAQRDTDV +TTVFVA +GS L G IAGKRLALGSADSA
Sbjct 62 NTNLAYVRTVMQTDGHCVALAQRDTDVGFTTVFVAPSGSGLSGPTSIAGKRLALGSADSA 121
Query 123 HAAILPLYYLRRAGIAESDLQVIRFDTDIGKHGDTGRSELDAVDAVLAGEADVAAIGSST 182
HAAILPL+YL RAG+ SDLQVIRFDTDIGKHGDTGRSELDA++A+LAGE DVAAIGSST
Sbjct 122 HAAILPLHYLTRAGVPPSDLQVIRFDTDIGKHGDTGRSELDAIEAMLAGEVDVAAIGSST 181
Query 183 WAAMGAAELMGESLTEVWRTDGYCHCMFTALDTLPAERYQPWLDRLLAMSWDDSEHRKIL 242
W AMG ELM +L EVWRTDGYCHCMFTALDTLPA+RY PW+D+LLAM WD+ EHR+IL
Sbjct 182 WEAMGRDELMAGTLEEVWRTDGYCHCMFTALDTLPAQRYTPWVDKLLAMDWDNPEHRRIL 241
Query 243 ELEGLRRWVPPHLDGYKPLFEAVQEQGIDPRW 274
ELEGLRRWV PHLDGY+PLF AV+EQG+DPRW
Sbjct 242 ELEGLRRWVRPHLDGYEPLFAAVEEQGVDPRW 273
>gi|88856677|ref|ZP_01131333.1| hypothetical protein A20C1_10860 [marine actinobacterium PHSC20C1]
gi|88814138|gb|EAR24004.1| hypothetical protein A20C1_10860 [marine actinobacterium PHSC20C1]
Length=269
Score = 339 bits (870), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 164/271 (61%), Positives = 207/271 (77%), Gaps = 3/271 (1%)
Query 4 EPLVVGAVAYTPNVVPIWEGIRGYFQDSESPDTQMDFVLYSNYARLVDSLIAGHIDIAWN 63
+PL++GAVAYTPNVV IWEGIR YF D+++P MDF+L+SNY R VD+LI G IDIAWN
Sbjct 2 KPLLIGAVAYTPNVVTIWEGIRDYFADTDTP---MDFILFSNYGRQVDALIDGTIDIAWN 58
Query 64 TNLAYVRTVLQTGGRCTPLAQRDTDVDYTTVFVAHAGSDLHGAKDIAGKRLALGSADSAH 123
TNLA+VRTV QT G C LA RDTD + T+FVA AG+ + + + G+RLALGS DSA
Sbjct 59 TNLAWVRTVAQTEGHCVALATRDTDTVFQTMFVARAGAGMKDLESLRGRRLALGSKDSAQ 118
Query 124 AAILPLYYLRRAGIAESDLQVIRFDTDIGKHGDTGRSELDAVDAVLAGEADVAAIGSSTW 183
AAILP+++L AG+A+ D+ ++R ++D+GKHGDTGRSELDA+ AVL +AD AAIG +TW
Sbjct 119 AAILPVHFLAEAGLADGDVDLLRINSDVGKHGDTGRSELDALRAVLDDQADAAAIGINTW 178
Query 184 AAMGAAELMGESLTEVWRTDGYCHCMFTALDTLPAERYQPWLDRLLAMSWDDSEHRKILE 243
A+G +LM + W++ Y HC FTALDTL ER QPW+DRLLAM W++ HR ILE
Sbjct 179 EAIGRDQLMPGAFEVFWQSPTYSHCNFTALDTLTDERVQPWVDRLLAMDWENPVHRPILE 238
Query 244 LEGLRRWVPPHLDGYKPLFEAVQEQGIDPRW 274
+EGL +WV P L+GYK LFEAV+ QGI PRW
Sbjct 239 MEGLTQWVLPKLEGYKSLFEAVETQGITPRW 269
>gi|296272718|ref|YP_003655349.1| hypothetical protein Arnit_1183 [Arcobacter nitrofigilis DSM
7299]
gi|296096892|gb|ADG92842.1| conserved hypothetical protein [Arcobacter nitrofigilis DSM 7299]
Length=275
Score = 239 bits (611), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 118/272 (44%), Positives = 176/272 (65%), Gaps = 9/272 (3%)
Query 4 EPLVVGAVAYTPNVVPIWEGIRGYFQDSESPDTQMDFVLYSNYARLVDSLIAGHIDIAWN 63
+P+VVG+VAY P +V IW+ IR YF D+ ++D++L+SNY ++ L++G IDIAWN
Sbjct 3 KPIVVGSVAYDPKIVTIWDIIRDYFNDN---GVRLDYMLFSNYEAQIEYLLSGKIDIAWN 59
Query 64 TNLAYVRTVLQTGGRCTPLAQRDTDVDYTTVFVAHAGSDLHGAKDIAGKRLALGSADSAH 123
TN+A+VRT + GR L RDTD+D+ +VF+ A S + D+ G++ ALGSADSA
Sbjct 60 TNVAWVRTHELSKGRAKALLMRDTDIDFKSVFITKASSGIKSINDLKGRKFALGSADSAQ 119
Query 124 AAILPLYYLRRAGIAESDLQVIRFDTDIGKHGDTGRSELDAVDAVLAGEADVAAIGSSTW 183
AAILPL YL+ D++++RF++D+GKHGDTGRSE D +DA+L E D AIG ++W
Sbjct 120 AAILPLKYLQNEAKDFDDIEIVRFNSDLGKHGDTGRSEFDILDAILNNEIDAGAIGITSW 179
Query 184 AAMGAAELM--GESLTEVWRTDGYCHCMFTALDTLPAERYQPWLDRLLAMSWDDSEHRKI 241
M + GE + + ++GYCHC FT +DTL + + + LLA ++ +K+
Sbjct 180 VRMLEDGMFPSGE-IESFYVSEGYCHCNFTVIDTLDESIQKTFTEMLLAQDPNEPIIKKM 238
Query 242 LELEGLRRWVP---PHLDGYKPLFEAVQEQGI 270
+++EGL +WV L GY L A++EQ +
Sbjct 239 MQMEGLNKWVKTGQEELKGYDVLTTAMKEQDL 270
>gi|237753221|ref|ZP_04583701.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
BAA-430]
gi|229375488|gb|EEO25579.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
BAA-430]
Length=279
Score = 239 bits (611), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 121/275 (44%), Positives = 180/275 (66%), Gaps = 10/275 (3%)
Query 4 EPLVVGAVAYTPNVVPIWEGIRGY-FQDSESPDTQMDFVLYSNYARLVDSLIAGHIDIAW 62
+ L++GAVAY P VVPIW+ IR Y +++++ ++D+VL+SNY R VD+L+ GHIDIAW
Sbjct 2 QTLLLGAVAYDPKVVPIWDIIRDYANENAKTFGIKLDYVLFSNYERQVDALLKGHIDIAW 61
Query 63 NTNLAYVRTVLQTGGRCTPLAQRDTDVDYTTVFVAHAGSDLHGAKDIAGKRLALGSADSA 122
NTN+A++RT+ TGG+ + L RDTD+D+TT FV GS + D+AGKR LGS DSA
Sbjct 62 NTNVAWIRTLHATGGKASALVMRDTDIDFTTKFVCKKGSRIQSLADLAGKRFGLGSMDSA 121
Query 123 HAAILPLYYLRRA--GIAESDLQVIRFDTDIGKHGDTGRSELDAVDAVLAGEADVAAIGS 180
AAI+PLYYL++ G+ + L ++R+++D+GKHGDTGRSE D ++A+ GE D +IGS
Sbjct 122 QAAIMPLYYLQKEQDGL-DFQLSIVRYNSDVGKHGDTGRSEFDLLEAIKKGELDAGSIGS 180
Query 181 STWAAMGAAELMGESLTEVWRTDGYCHCMFTALDTLPAERYQPWLDRLLAMS--WDDSEH 238
STW + E + W + GYCHC F+ L L + + + LL+ + D+
Sbjct 181 STWIRI-LEEGSYPDIESFWSSPGYCHCNFSVLSNLDSNLAESFSQMLLSQNAKKDNPII 239
Query 239 RKILELEGLRRWVP---PHLDGYKPLFEAVQEQGI 270
K++++EGL WV L Y + +A+Q+Q +
Sbjct 240 AKMMQMEGLNAWVKVGESELRAYDSIHQAMQKQNL 274
>gi|345469269|dbj|BAK70720.1| conserved hypothetical protein [Arcobacter butzleri ED-1]
Length=276
Score = 234 bits (596), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 116/273 (43%), Positives = 179/273 (66%), Gaps = 10/273 (3%)
Query 4 EPLVVGAVAYTPNVVPIWEGIRGYFQDSESPDTQMDFVLYSNYARLVDSLIAGHIDIAWN 63
+P+VVG+VAY P +V IW+ IR YF D+ ++D+VL+SNY ++ L++G IDIAWN
Sbjct 3 KPIVVGSVAYDPKIVTIWDIIRDYFNDN---GVRLDYVLFSNYEAQIEYLLSGKIDIAWN 59
Query 64 TNLAYVRTVLQTGGRCTPLAQRDTDVDYTTVFVAHAGSDLHGAKDIAGKRLALGSADSAH 123
TN+A+VRT + + L RDTD+D+ +VF+ A S + +D+ GK+ LGSADSA
Sbjct 60 TNVAWVRTYELSNHKAQALLMRDTDIDFKSVFITKAKSGIKSVQDLKGKKFGLGSADSAQ 119
Query 124 AAILPLYYLRRA-GIAESDLQVIRFDTDIGKHGDTGRSELDAVDAVLAGEADVAAIGSST 182
AAILPL YL+ G + D+++++F++D+GKHGDTGRSE D ++A+ + D AIG ST
Sbjct 120 AAILPLKYLQNELGESIKDVEIVKFNSDLGKHGDTGRSEFDVLEAIKNDKLDAGAIGIST 179
Query 183 WAAMGAAELM--GESLTEVWRTDGYCHCMFTALDTLPAERYQPWLDRLLAMSWDDSEHRK 240
W + L GE + + +DGYCHC FTAL++L + + ++D +L+ ++ +K
Sbjct 180 WVRVLEEGLFPAGE-IESFYTSDGYCHCNFTALNSLDEKVKKTFVDMMLSQDPNEPIIKK 238
Query 241 ILELEGLRRWV---PPHLDGYKPLFEAVQEQGI 270
++++EGL +WV L GY L +A+ EQ +
Sbjct 239 MMQMEGLNKWVVTTSEELKGYDVLTQAMFEQDL 271
>gi|254457196|ref|ZP_05070624.1| conserved hypothetical protein [Campylobacterales bacterium GD
1]
gi|207085988|gb|EDZ63272.1| conserved hypothetical protein [Campylobacterales bacterium GD
1]
Length=276
Score = 232 bits (592), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 110/272 (41%), Positives = 179/272 (66%), Gaps = 8/272 (2%)
Query 4 EPLVVGAVAYTPNVVPIWEGIRGYFQDSESPDTQMDFVLYSNYARLVDSLIAGHIDIAWN 63
+ +++GAVAY VVPIW+ IR Y S ++D+VL+SNY +++L G ID+AWN
Sbjct 3 KTIMLGAVAYDAKVVPIWDIIRDY---SNEYGVRLDYVLFSNYEAQIEALQKGMIDVAWN 59
Query 64 TNLAYVRTVLQTGGRCTPLAQRDTDVDYTTVFVAHAGSDLHGAKDIAGKRLALGSADSAH 123
TN+A++RT T + L RDTD+D+ ++FVA + +++ +D+ GK+ LGS+DSA
Sbjct 60 TNVAWIRTSHATQNKAKALIMRDTDIDFKSIFVAKSSKNINSIEDLKGKKFGLGSSDSAQ 119
Query 124 AAILPLYYLRRAGIA-ESDLQVIRFDTDIGKHGDTGRSELDAVDAVLAGEADVAAIGSST 182
A+I+P +L++ G+ ++DL+++RF++D+GKHGDTGRSE D ++A++ G+ D AIGS+T
Sbjct 120 ASIIPYAFLQKEGLNPQTDLELVRFNSDLGKHGDTGRSEFDVLNAIMNGDIDAGAIGSTT 179
Query 183 WAAMGAAELMGESLTE-VWRTDGYCHCMFTALDTLPAERYQPWLDRLLAMSWDDSEHRKI 241
W + L E E ++TDGYCHC FT + A+ + + + +L+ + +K+
Sbjct 180 WIRIIEEGLFPEGEIESFYQTDGYCHCNFTVMPDADAQMCEEFTNMILSQDPREPIIKKM 239
Query 242 LELEGLRRWV---PPHLDGYKPLFEAVQEQGI 270
+ +EGL +WV P L GY L+EA+Q+Q +
Sbjct 240 MIMEGLNKWVKITPEELKGYDALYEAMQDQNL 271
>gi|242308925|ref|ZP_04808080.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
gi|239524589|gb|EEQ64455.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
Length=289
Score = 224 bits (571), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 116/287 (41%), Positives = 174/287 (61%), Gaps = 22/287 (7%)
Query 4 EPLVVGAVAYTPNVVPIWEGIRGYFQDSESPDTQMDFVLYSNYARLVDSLIAGHIDIAWN 63
+ ++VGAVAY P +VPIW+ IR Y D ++D+VL+SNY R V+ L+ G IDIAWN
Sbjct 2 KNILVGAVAYAPQIVPIWDTIRDYANDYFKGKLRLDYVLFSNYERQVEWLLNGKIDIAWN 61
Query 64 TNLAYVRTVLQTGGRCTPLAQRDTDVDYTTVFVAHAGSDLHGAKDIAGKRLALGSADSAH 123
TN+AYVR+ + L RDTD+ + ++FV ++ + + GKR LGS DSA
Sbjct 62 TNVAYVRSKFAANNQVEALLMRDTDIGFKSIFVGRK-ENITNLESLRGKRFGLGSLDSAQ 120
Query 124 AAILPLYYLRRAGIAE-----SDLQ----------VIRFDTDIGKHGDTGRSELDAVDAV 168
AAI+PL+YL++ G DLQ +IR+++D+GKHGDTGRSE D +D++
Sbjct 121 AAIMPLFYLQKEGFNTQEFLAKDLQTSQNIGDSIAIIRYNSDVGKHGDTGRSEFDVLDSI 180
Query 169 LAGEADVAAIGSSTWAAMGAAELMGESLTEVWRTDGYCHCMFTALDTLPAERYQPWLDRL 228
AG D AIGS+TWA + + E ++ + + YCHC FTAL L A+ +++ +
Sbjct 181 KAGTLDAGAIGSTTWARILQEDSYPE-ISSFYASPDYCHCNFTALKNLNADSKNLFIEMM 239
Query 229 LAMS--WDDSEHRKILELEGLRRWV---PPHLDGYKPLFEAVQEQGI 270
L+ + +D ++++LEGL +WV L GY +FEA+Q+Q +
Sbjct 240 LSQNTLKNDPAIAQMMKLEGLNQWVICDEKTLKGYDEIFEAMQKQNL 286
>gi|253827127|ref|ZP_04870012.1| ABC-type phosphate/phosphonate transport system, periplasmic
component [Helicobacter canadensis MIT 98-5491]
gi|313141328|ref|ZP_07803521.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491]
gi|253510533|gb|EES89192.1| ABC-type phosphate/phosphonate transport system, periplasmic
component [Helicobacter canadensis MIT 98-5491]
gi|313130359|gb|EFR47976.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491]
Length=288
Score = 216 bits (550), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 117/288 (41%), Positives = 173/288 (61%), Gaps = 25/288 (8%)
Query 4 EPLVVGAVAYTPNVVPIWEGIRGYFQDSESPDTQMDFVLYSNYARLVDSLIAGHIDIAWN 63
+ ++VGAVAY P +VPIW+ IR Y D ++D+VL+SNY R V+ LI IDIAWN
Sbjct 2 KNILVGAVAYAPQIVPIWDTIRDYANDYFGGKIRLDYVLFSNYERQVEWLINKKIDIAWN 61
Query 64 TNLAYVRTVLQTGGRCTPLAQRDTDVDYTTVFVAHAG-SDLHGAKDIAGKRLALGSADSA 122
TN+AY+R+ T + RDTD+ + ++FV+ S+LH K GK+ LGS DSA
Sbjct 62 TNVAYIRSKFATKDNVEAILMRDTDIGFKSIFVSQEKISNLHSLK---GKKFGLGSLDSA 118
Query 123 HAAILPLYYLRRAG--IAESDLQ-------------VIRFDTDIGKHGDTGRSELDAVDA 167
AAI+PL+YL++AG I ES Q VIR+++D+GKHGDTGRSE D ++A
Sbjct 119 QAAIMPLFYLQKAGLKIQESLAQNLSTLQTSNEAVSVIRYNSDVGKHGDTGRSEFDVLEA 178
Query 168 VLAGEADVAAIGSSTWAAMGAAELMGESLTEVWRTDGYCHCMFTALDTLPAERYQPWLDR 227
+ AG D AIGS+TWA + E ++ + ++ YCHC FT L + ++
Sbjct 179 IKAGILDAGAIGSTTWARI-LQEGTYPEISSFYASEDYCHCNFTTLKGFDEDLKNTFVSM 237
Query 228 LLAMSW--DDSEHRKILELEGLRRWV---PPHLDGYKPLFEAVQEQGI 270
+L+ + +D + ++++LEGL +WV L GY + +A+QEQ +
Sbjct 238 MLSQNTLKNDPQISQMMKLEGLNQWVVCDQQILSGYDHIIQAMQEQNL 285
>gi|296127660|ref|YP_003634912.1| hypothetical protein Bmur_2644 [Brachyspira murdochii DSM 12563]
gi|296019476|gb|ADG72713.1| conserved hypothetical protein [Brachyspira murdochii DSM 12563]
Length=284
Score = 209 bits (532), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 109/281 (39%), Positives = 168/281 (60%), Gaps = 18/281 (6%)
Query 4 EPLVVGAVAYTPNVVPIWEGIRGYFQDSESPDTQMDFVLYSNYARLVDSLIAGHIDIAWN 63
+ L++GAVAY P VV +W+ IR Y S ++D+VL+SNY R VDSL+ GHIDIAWN
Sbjct 2 KTLLLGAVAYDPKVVGVWDIIRDY---SNEYGLKLDYVLFSNYERQVDSLLKGHIDIAWN 58
Query 64 TNLAYVRTVLQTGGRCTPLAQRDTDVDYTTVFVAHAGSDLHGAKDIAGKRLALGSADSAH 123
TN+A+++T+ T + LA RDTD ++T+ F+ S + +D+ GK+ +GS DS+
Sbjct 59 TNVAWIQTLYATNDKARALAMRDTDTNFTSKFIVKKDSTIKKLEDLKGKKFGVGSYDSSQ 118
Query 124 AAILPLYYLRRAG--IAESDL---------QVIRFDTDIGKHGDTGRSELDAVDAVLAGE 172
AAILP+ Y++ AG I E DL ++R++TD+GKHGDTG+SE +D + +G
Sbjct 119 AAILPIQYIKEAGLQIKEIDLNADTDPNCVNIVRYNTDLGKHGDTGKSEWHVLDDIKSGA 178
Query 173 ADVAAIGSSTWAAMGAAELMGE-SLTEVWRTDGYCHCMFTALDTLPAERYQPWLDRLLAM 231
D +IGS+TW + L + L + +CHC F+ + E ++ L +
Sbjct 179 LDAGSIGSTTWIRILEEGLYPDGELISFYTGPEFCHCNFSVMPDFDKEAGDAFVKMLTSQ 238
Query 232 SWDDSEHRKILELEGLRRWV---PPHLDGYKPLFEAVQEQG 269
S DD +K++ +EGL +W+ L GY L++A++EQ
Sbjct 239 SKDDPIIKKMMSMEGLNKWIAVGEKELRGYDSLYKAMREQN 279
>gi|315637011|ref|ZP_07892235.1| conserved hypothetical protein [Arcobacter butzleri JV22]
gi|315478841|gb|EFU69550.1| conserved hypothetical protein [Arcobacter butzleri JV22]
Length=222
Score = 208 bits (529), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 101/216 (47%), Positives = 147/216 (69%), Gaps = 7/216 (3%)
Query 4 EPLVVGAVAYTPNVVPIWEGIRGYFQDSESPDTQMDFVLYSNYARLVDSLIAGHIDIAWN 63
+P+VVG+VAY P +V IW+ IR YF D+ ++D+VL+SNY ++ L++G IDIAWN
Sbjct 3 KPIVVGSVAYDPKIVTIWDIIRDYFNDN---GVRLDYVLFSNYEAQIEYLLSGKIDIAWN 59
Query 64 TNLAYVRTVLQTGGRCTPLAQRDTDVDYTTVFVAHAGSDLHGAKDIAGKRLALGSADSAH 123
TN+A+VRT + + L RDTD+D+ +VF+ A S + +D+ GK+ LGSADSA
Sbjct 60 TNVAWVRTYELSNHKAQALLMRDTDIDFKSVFITKAKSGIKSVQDLKGKKFGLGSADSAQ 119
Query 124 AAILPLYYLRRA-GIAESDLQVIRFDTDIGKHGDTGRSELDAVDAVLAGEADVAAIGSST 182
AAILPL YL+ G + D+++++F++D+GKHGDTGRSE D ++A+ + D AIG ST
Sbjct 120 AAILPLKYLQNELGESIKDVEIVKFNSDLGKHGDTGRSEFDVLEAIKNDKLDAGAIGIST 179
Query 183 WAAMGAAELM--GESLTEVWRTDGYCHCMFTALDTL 216
W + L GE + + +DGYCHC FTAL++L
Sbjct 180 WVRVLEEGLFPAGE-IESFYTSDGYCHCNFTALNSL 214
>gi|32267013|ref|NP_861045.1| hypothetical protein HH1514 [Helicobacter hepaticus ATCC 51449]
gi|32263065|gb|AAP78111.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449]
Length=290
Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 108/284 (39%), Positives = 168/284 (60%), Gaps = 22/284 (7%)
Query 4 EPLVVGAVAYTPNVVPIWEGIRGYFQDSESPDTQMDFVLYSNYARLVDSLIAGHIDIAWN 63
+ ++VGAVAY P +VPIW+ IR Y D D ++D+VL+SNY R V L G IDIAWN
Sbjct 2 KSILVGAVAYAPQIVPIWDTIREYANDY-FKDIRLDYVLFSNYERQVQWLKEGKIDIAWN 60
Query 64 TNLAYVRTVLQTGGRCTPLAQRDTDVDYTTVFVAHAGSDLHGAKDIAGKRLALGSADSAH 123
TN+A++R+ T + RDTD+ + +VFVA + + G +D+ GK+ LGS DSA
Sbjct 61 TNVAFIRSKHCTNNGAEAILMRDTDIGFKSVFVAKRDT-MKGLEDLKGKKFGLGSLDSAQ 119
Query 124 AAILPLYYLRRAGI--------------AESDLQVIRFDTDIGKHGDTGRSELDAVDAVL 169
AAI+PL+YL+++ + + L++ RF++D+GKHGDTGRSE D +D +
Sbjct 120 AAIMPLFYLQQSALNLREMPLDSLNQKGTDDMLRIFRFNSDVGKHGDTGRSEFDVLDKIK 179
Query 170 AGEADVAAIGSSTWAAMGAAELMGESLTEVWRTDGYCHCMFTALDTLPAERYQPWLDRLL 229
+GE D AIGS+TW + E + + + YCHC FT L + + + +++ +
Sbjct 180 SGELDAGAIGSTTWVRV-MQEGNYPQMVNFYTSPDYCHCNFTTLKSFDSYLKRSFVEMMK 238
Query 230 AMS--WDDSEHRKILELEGLRRWV---PPHLDGYKPLFEAVQEQ 268
+ + +D + ++ LEGL WV L GY+ + +A++EQ
Sbjct 239 SQNALKNDPKIAHMMSLEGLNEWVLCDQDALKGYEEIAQAMKEQ 282
>gi|162449376|ref|YP_001611743.1| hypothetical protein sce1106 [Sorangium cellulosum 'So ce 56']
gi|161159958|emb|CAN91263.1| hypothetical protein sce1106 [Sorangium cellulosum 'So ce 56']
Length=267
Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 108/259 (42%), Positives = 157/259 (61%), Gaps = 4/259 (1%)
Query 1 MSTEPLVVGAVAYTPNVVPIWEGIRGYFQDSESPDTQMDFVLYSNYARLVDSLIAGHIDI 60
M ++VGAVA+ VV +WE +R +F++ +DF L+S Y R V+SLI GHID+
Sbjct 1 MKDLAMLVGAVAHDAKVVTLWESLREHFREH---GILIDFALFSTYERQVESLIRGHIDV 57
Query 61 AWNTNLAYVRTVLQTGGRCTPLAQRDTDVDYTTVFVAHAGSDLHGAKDIAGKRLALGSAD 120
AWN+ +A+VR QT GR LA R+ D D+ + + + + D+ GK LA+GS D
Sbjct 58 AWNSAVAHVRVKRQTEGRSRSLAMREIDRDFHSKLLVRRDAAVGALSDLEGKALAVGSVD 117
Query 121 SAHAAILPLYYLRRAGIAESDLQVIRFDTDIGKHGDTGRSELDAVDAVLAGEADVAAIGS 180
SAHA ILPL++LR+AG+A +Q++ F+ D+GKHGDT SE+ A+ A+ G+A AA+G
Sbjct 118 SAHARILPLHFLRQAGVAVEKIQLMPFEVDVGKHGDTATSEVQALAALHEGKAQAAAVGD 177
Query 181 STWAAMGAAELMGESLTEV-WRTDGYCHCMFTALDTLPAERYQPWLDRLLAMSWDDSEHR 239
+ W A A + +V W T Y MF AL LP + + + LL+M+W + +HR
Sbjct 178 AVWLAEQANGHIDLRRVDVLWTTPAYDFAMFDALPALPEAKAEAFQRALLSMTWKNPKHR 237
Query 240 KILELEGLRRWVPPHLDGY 258
+I EL G R+WV D Y
Sbjct 238 RIFELMGHRQWVSGRDDRY 256
>gi|313144478|ref|ZP_07806671.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
gi|313129509|gb|EFR47126.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
Length=285
Score = 194 bits (494), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 105/282 (38%), Positives = 161/282 (58%), Gaps = 20/282 (7%)
Query 6 LVVGAVAYTPNVVPIWEGIRGYFQDSESPDTQMDFVLYSNYARLVDSLIAGHIDIAWNTN 65
++VGAVAY P +VPIW+ IR Y ++ D ++D+VL+SNY R V L+ IDIAWNTN
Sbjct 4 IIVGAVAYAPQIVPIWDIIREY-ANAYFKDIRLDYVLFSNYERQVQWLMEKKIDIAWNTN 62
Query 66 LAYVRTVLQTGGRCTPLAQRDTDVDYTTVFVAHAGSDLHGAKDIAGKRLALGSADSAHAA 125
+AY+R+ + + + RDTD+ + +VF+ + +D+ GK+ LGS DSA AA
Sbjct 63 VAYIRSQVASDNAMEAILMRDTDIGFQSVFITRENG-VKDLQDLQGKKFGLGSLDSAQAA 121
Query 126 ILPLYYLRRAGIAESDLQ------------VIRFDTDIGKHGDTGRSELDAVDAVLAGEA 173
I+PL++L+ + ++ + RF++D+GKHGDTGRSE D +D + +GE
Sbjct 122 IMPLHFLQDCTLTLQEMSSLSESAPSNAVGIYRFNSDVGKHGDTGRSEFDVLDKIRSGEL 181
Query 174 DVAAIGSSTWAAMGAAELMGESLTEVWRTDGYCHCMFTALDTLPAERYQPWLDRLLAMS- 232
D AIGS TWA + E L + YCHC FT +++ +L+ +
Sbjct 182 DAGAIGSGTWARI-LQEGSYSELKSFYVGAEYCHCNFTLSKDFDKGLRDAFVEMMLSQNA 240
Query 233 -WDDSEHRKILELEGLRRWV---PPHLDGYKPLFEAVQEQGI 270
DS+ ++ LEGL WV L GY+ +FEA+++Q +
Sbjct 241 RKSDSKIAHMMSLEGLNEWVLCDEKALKGYEIIFEAMKKQNL 282
>gi|68272011|gb|AAY89286.1| hypothetical protein [uncultured bacterium BAC10-10]
Length=286
Score = 186 bits (471), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 109/271 (41%), Positives = 156/271 (58%), Gaps = 9/271 (3%)
Query 1 MST-EPLVVGAVAYTPNVVPIWEGIRGYFQDSESPDTQMDFVLYSNYARLVDSLIAGHID 59
MST PLV+GAVAY P VV IW+G + YF+ S + D+VLY+NY V++ + GH+
Sbjct 1 MSTLGPLVLGAVAYDPKVVTIWDGFQQYFR---SHGLEFDYVLYTNYESQVEAHVLGHVQ 57
Query 60 IAWNTNLAYV---RTVLQTGGRCTPLAQRDTDVDYTTVFVAHAGSDLHGAKDIAGKRLAL 116
+AWN+ LA++ R + G R L RD+D D T++ + A SD+ D+ G+R+A+
Sbjct 58 VAWNSPLAWLEAERVATRIGRRADALCMRDSDRDLTSLILVRADSDIESVTDLHGRRIAV 117
Query 117 GSADSAHAAILPLYYLRRAGIAE-SDLQVIRFDTDIGKHGDTGRSELDAVDAVLAGEADV 175
G++DS A ++PL +L G+ +D I FD +GKHGD E DAV A++ GEAD
Sbjct 118 GASDSPQATLIPLSHLADHGLLPGTDFTTIGFDRLVGKHGDHIGGERDAVRALVHGEADA 177
Query 176 AAIGSSTWAAMGAAELMGESLTEVW-RTDGYCHCMFTALDTLPAERYQPWLDRLLAMSWD 234
A + + A G + +T + +T Y HC FT + P + D LL MS+
Sbjct 178 ACLIDANHLAFGREGTIPAGVTRILAQTPAYDHCNFTVFEDAPPAEVARFRDLLLGMSYA 237
Query 235 DSEHRKILELEGLRRWVPPHLDGYKPLFEAV 265
D E R +L+LEGL+RWVP GY L AV
Sbjct 238 DPEVRPLLDLEGLKRWVPGRTVGYAQLASAV 268
>gi|333913942|ref|YP_004487674.1| hypothetical protein DelCs14_2301 [Delftia sp. Cs1-4]
gi|333744142|gb|AEF89319.1| hypothetical protein DelCs14_2301 [Delftia sp. Cs1-4]
Length=288
Score = 172 bits (435), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 108/275 (40%), Positives = 150/275 (55%), Gaps = 9/275 (3%)
Query 2 STEPLV-VGAVAYTPNVVPIWEGIRGYFQDSESPDTQMDFVLYSNYARLVDSLIAGHIDI 60
+T P++ +GAVAY P V+ IWEG + YF + D+VLYSNY L ++LIAG + +
Sbjct 3 TTAPVIKLGAVAYAPKVITIWEGFKAYFIER---GYYFDYVLYSNYESLTEALIAGDVHL 59
Query 61 AWNTNLAYVRT---VLQTGGRCTPLAQRDTDVDYTTVFVAHAGSDLHGAKDIAGKRLALG 117
AWN+ LA+VR G R +A RDTD+D ++ V A S + +D+ GK + G
Sbjct 60 AWNSPLAFVRADRMARARGLRVESIAMRDTDLDLHSLLVVPADSPIQSVQDLRGKTVGFG 119
Query 118 SADSAHAAILPLYYLRRAG-IAESDLQVIRFDTDIGKHGDTGRSELDAVDAVLAGEADVA 176
+ DS A ++PL +LR+ G +A D RFD GKHGD E A A++AGE +
Sbjct 120 AVDSPQATLIPLDHLRQEGLVAGRDYTARRFDVLGGKHGDHIGGERLAAAAMVAGEIQAS 179
Query 177 AIGSSTWAAMGAAELMGESLTEVWRTDG-YCHCMFTALDTLPAERYQPWLDRLLAMSWDD 235
+ + A + T V T G + HC TA + AER + D LLAMSWDD
Sbjct 180 WMVGKNYQAFAREGTLPAGGTRVLATSGAFDHCNMTAGPHIDAERAAAFRDILLAMSWDD 239
Query 236 SEHRKILELEGLRRWVPPHLDGYKPLFEAVQEQGI 270
+ R +LELEGL+ W P GY L AV ++
Sbjct 240 AAVRPLLELEGLKVWHPGRGTGYGLLERAVTDEAF 274
>gi|160899939|ref|YP_001565521.1| hypothetical protein Daci_4507 [Delftia acidovorans SPH-1]
gi|160365523|gb|ABX37136.1| conserved hypothetical protein [Delftia acidovorans SPH-1]
Length=282
Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 106/270 (40%), Positives = 146/270 (55%), Gaps = 8/270 (2%)
Query 6 LVVGAVAYTPNVVPIWEGIRGYFQDSESPDTQMDFVLYSNYARLVDSLIAGHIDIAWNTN 65
+ +GAVAY P V+ IWEG + YF + D+VLYSNY L ++LIAG + +AWN+
Sbjct 2 IKLGAVAYAPKVITIWEGFKAYFIER---GYYFDYVLYSNYESLTEALIAGDVHLAWNSP 58
Query 66 LAYVRT---VLQTGGRCTPLAQRDTDVDYTTVFVAHAGSDLHGAKDIAGKRLALGSADSA 122
LA+VR G R +A RDTD+D ++ V A S + +D+ GK + G+ DS
Sbjct 59 LAFVRADRMARARGLRVESIAMRDTDLDLHSLLVVPADSPIQSVQDLRGKTVGFGAVDSP 118
Query 123 HAAILPLYYLRRAGI-AESDLQVIRFDTDIGKHGDTGRSELDAVDAVLAGEADVAAIGSS 181
A ++PL +LR+ G+ A D RFD GKHGD E A A++AGE + +
Sbjct 119 QATLIPLDHLRQEGLLAGRDYTARRFDVLGGKHGDHIGGERLAAAAMVAGEIQASWMVGK 178
Query 182 TWAAMGAAELMGESLTEVWRTDG-YCHCMFTALDTLPAERYQPWLDRLLAMSWDDSEHRK 240
+ A + T V T G + HC TA + AER + D LLAMSWDD+ R
Sbjct 179 NYQAFAREGTLPAGGTRVLATSGAFDHCNMTAGPHIDAERAAAFRDILLAMSWDDAAVRP 238
Query 241 ILELEGLRRWVPPHLDGYKPLFEAVQEQGI 270
+LELEGL+ W P GY L AV ++
Sbjct 239 LLELEGLKVWHPGRGTGYGLLERAVTDEAF 268
>gi|339482745|ref|YP_004694531.1| hypothetical protein Nit79A3_1297 [Nitrosomonas sp. Is79A3]
gi|338804890|gb|AEJ01132.1| hypothetical protein Nit79A3_1297 [Nitrosomonas sp. Is79A3]
Length=284
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 96/266 (37%), Positives = 143/266 (54%), Gaps = 8/266 (3%)
Query 6 LVVGAVAYTPNVVPIWEGIRGYFQDSESPDTQMDFVLYSNYARLVDSLIAGHIDIAWNTN 65
L++GAVAY P VV IW+G + +F + D++LYSNY R V+ AGH +AWN+
Sbjct 5 LLLGAVAYDPKVVTIWDGFQKWFAQH---NFDFDYILYSNYERQVEGHFAGHFHVAWNSP 61
Query 66 LAYVRT---VLQTGGRCTPLAQRDTDVDYTTVFVAHAGSDLHGAKDIAGKRLALGSADSA 122
LA+++T +QTG +A RD+D D T+V + S + +D+ GK +A+G++DS
Sbjct 62 LAWLQTERIAVQTGRTVKAIAMRDSDCDLTSVIIVRNDSPIRSIEDLRGKTVAVGASDSP 121
Query 123 HAAILPLYYLRRAGIA-ESDLQVIRFDTDIGKHGDTGRSELDAVDAVLAGEADVAAIGSS 181
A ++PL +L AG+ E D V FD +GKHGD E A A++ G D A +
Sbjct 122 QATLIPLLHLAEAGLEPEKDFAVRLFDVLVGKHGDHIGGERHAAKALIEGAVDAACMIDG 181
Query 182 TWAAMGAAELMGESLTEVWRTDG-YCHCMFTALDTLPAERYQPWLDRLLAMSWDDSEHRK 240
+ + T + G Y HC FT LD P + L++MS+DD + R
Sbjct 182 NHLLFSREGTLPSNSTRILAQTGEYDHCNFTVLDDAPEAAVAQFCTLLMSMSYDDPQVRP 241
Query 241 ILELEGLRRWVPPHLDGYKPLFEAVQ 266
+L+LEGL++W P + Y L A
Sbjct 242 LLDLEGLKQWRPGRTEKYALLARAAN 267
>gi|337748575|ref|YP_004642737.1| phosphonate ABC transporter periplasmic phosphonate-binding protein
[Paenibacillus mucilaginosus KNP414]
gi|336299764|gb|AEI42867.1| phosphonate ABC superfamily ATP binding cassette transporter
substrate-binding protein [Paenibacillus mucilaginosus KNP414]
Length=272
Score = 162 bits (411), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 94/266 (36%), Positives = 142/266 (54%), Gaps = 5/266 (1%)
Query 1 MSTEPLVVGAVAYTPNVVPIWEGIRGYFQDSESPDTQMDFVLYSNYARLVDSLIAGHIDI 60
MS + + VGAV Y P V IW I +F++ +++ V Y +Y VD L+ IDI
Sbjct 1 MSNDKIKVGAVIYDPRVTVIWGIIADFFKEE---GLEIECVFYKDYEGQVDGLMNREIDI 57
Query 61 AWNTNLAYVRTVLQTGGRCTPLAQRDTDVDYTTVFVAHAGSDLHGAKDIAGKRLALGSAD 120
AWN+ LA++ T ++T G C + RDTD D TVFV S + + GK + G+ D
Sbjct 58 AWNSPLAWLDTYIRTDGTCQMGSMRDTDRDRKTVFVVRKDSGITHLDGLRGKTIGFGAVD 117
Query 121 SAHAAILPLYYLRRAGIAE-SDLQVIRFDTDIGKHGDTGRSELDAVDAVLAGEADVAAIG 179
S A ++P+ +L + G+ +D RFD +G HGD ELDA+ A++AGE D +
Sbjct 118 SPQARLIPINHLHKNGLEYGADYVEKRFDIGVGLHGDHVGGELDAMRALMAGEVDASVTL 177
Query 180 SSTWAAMGAAELMGES-LTEVWRTDGYCHCMFTALDTLPAERYQPWLDRLLAMSWDDSEH 238
W A M E+ L + T + HC+FTA ER+ W L M + + H
Sbjct 178 DLNWEAWKKDGTMDENQLACIDTTASFDHCIFTAHPDFSTERFVEWQKVLHRMDYTNEAH 237
Query 239 RKILELEGLRRWVPPHLDGYKPLFEA 264
+K++++EGL+ WV + G++ L EA
Sbjct 238 QKMMDMEGLKEWVEGRITGFQQLREA 263
>gi|256389766|ref|YP_003111330.1| hypothetical protein Caci_0551 [Catenulispora acidiphila DSM
44928]
gi|256355992|gb|ACU69489.1| conserved hypothetical protein [Catenulispora acidiphila DSM
44928]
Length=285
Score = 159 bits (402), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 100/276 (37%), Positives = 148/276 (54%), Gaps = 14/276 (5%)
Query 3 TEPLVVGAVAYTPNVVPIWEGIRGYFQDSESPDTQMDFVLYSNYARLVDSLIAGHIDIAW 62
+ +++GAVAY VV IW+G R +F+D D D+VLYS+Y R ++ L+ GHID+AW
Sbjct 2 SNRVLLGAVAYDSKVVTIWDGFRQWFRDR---DLDFDYVLYSHYERQIEDLVEGHIDVAW 58
Query 63 NTNLAYVRTVLQTGGRCT---PLAQRDTDVDYTTVFVAHAGSDLHGAKDIAGKRLALGSA 119
++ LA+VRTV R + RD+D D + + A SDL D+ G+ +A G+
Sbjct 59 HSPLAWVRTVRLARARSVGVRAVVMRDSDRDLVSAVLVRADSDLASLDDLRGRSVATGAI 118
Query 120 DSAHAAILPLYYLRRAGI-AESDLQVIRFDTDIGKHGDTGRSELDAVDAVLAGEADVAA- 177
DS A +LPL LR AG+ + D +V RFD +G HGD E DA A+ +G D A
Sbjct 119 DSPQAHLLPLSMLREAGLRPDVDFKVSRFDVRVGLHGDHVGGERDAAVALRSGLVDAACM 178
Query 178 IGSSTWAAMGAAELMGESLTEVWRTDGYCHCMFT---ALDTLPAERYQPWLDRLLAMSWD 234
+ ++T L S+ + +T+ + HC D +R+ LL M++D
Sbjct 179 LDANTLLFSREGTLPAGSVRVLAKTEPFDHCTMAVGPGADKSTVDRFTAL---LLGMAYD 235
Query 235 DSEHRKILELEGLRRWVPPHLDGYKPLFEAVQEQGI 270
D R + +LEGL++W+P D Y L AV E G
Sbjct 236 DPTVRPLFDLEGLKQWLPARTDRYSALERAVDELGF 271
>gi|332529282|ref|ZP_08405245.1| hypothetical protein HGR_05211 [Hylemonella gracilis ATCC 19624]
gi|332041292|gb|EGI77655.1| hypothetical protein HGR_05211 [Hylemonella gracilis ATCC 19624]
Length=281
Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 100/270 (38%), Positives = 140/270 (52%), Gaps = 9/270 (3%)
Query 7 VVGAVAYTPNVVPIWEGIRGYFQDSESPDTQMDFVLYSNYARLVDSLIAGHIDIAWNTNL 66
++GAVAY P VV IWEG + YF + D++LYSNY V++ G I AWN+ L
Sbjct 1 MLGAVAYAPKVVTIWEGFKAYFAER---GYAFDYILYSNYETQVEAQFKGDIAFAWNSPL 57
Query 67 AYVRT---VLQTGGRCTPLAQRDTDVDYTTVFVAHAGSDLHGAKDIAGKRLALGSADSAH 123
A+VR G + LA RD+D+D +V V + S D++G+ + G+ DS
Sbjct 58 AWVRADRMARARGQQVRALAMRDSDIDLHSVLVVRSDSPAQNPADLSGRTIGFGAVDSPQ 117
Query 124 AAILPLYYLR-RAG-IAESDLQVIRFDTDIGKHGDTGRSELDAVDAVLAGEADVAAIGSS 181
A ++PL +LR +AG +A D RFD GKHGD E DA A++ G+ D A + +
Sbjct 118 ATLIPLDHLRHQAGMVAGRDYNARRFDVLGGKHGDHIGGERDAAVALMKGDIDAAWMIAG 177
Query 182 TWAAMGAAELMGESLTEVWRTDG-YCHCMFTALDTLPAERYQPWLDRLLAMSWDDSEHRK 240
A + S T + T + HC T + A Q + D LL M W+D+ R
Sbjct 178 NHRAFAHEGTLPASGTRILATTAAFDHCNMTVSPGVDAGIAQRFGDILLGMDWNDARTRP 237
Query 241 ILELEGLRRWVPPHLDGYKPLFEAVQEQGI 270
+LELEGL+ W P GY L AV E+G
Sbjct 238 LLELEGLKSWQPGRTSGYALLERAVSEEGF 267
>gi|335044708|ref|ZP_08537731.1| hypothetical protein HMPREF9124_0016 [Oribacterium sp. oral taxon
108 str. F0425]
gi|333758494|gb|EGL36051.1| hypothetical protein HMPREF9124_0016 [Oribacterium sp. oral taxon
108 str. F0425]
Length=274
Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 86/263 (33%), Positives = 139/263 (53%), Gaps = 5/263 (1%)
Query 4 EPLVVGAVAYTPNVVPIWEGIRGYFQDSESPDTQMDFVLYSNYARLVDSLIAGHIDIAWN 63
E + +GAV Y P V IW I+ +F+ P ++ V Y +Y VD L++G IDIAWN
Sbjct 2 EKIKLGAVIYAPKVTVIWGIIQEFFEKENCP---IEPVFYKDYKSQVDGLMSGEIDIAWN 58
Query 64 TNLAYVRTVLQTGGRCTPLAQRDTDVDYTTVFVAHAGSDLHGAKDIAGKRLALGSADSAH 123
+ LA++ + L+T G C + RDTD D + V DI GK + G+ DS
Sbjct 59 SPLAWLDSYLRTKGECLNGSMRDTDQDRKSYLVVRKDKGYQTISDIKGKTIGFGAYDSPQ 118
Query 124 AAILPLYYLRRAGIA-ESDLQVIRFDTDIGKHGDTGRSELDAVDAVLAGEADVAAIGSST 182
A ++P+Y+L + G+ E D RFD +G HGD ELDA A+L+GE D + +
Sbjct 119 ARLIPIYHLHKNGLEFEKDYTEKRFDIGLGLHGDHVGGELDAAKAMLSGEVDGSWMLDLN 178
Query 183 WAAMGAAELMGESLTEVW-RTDGYCHCMFTALDTLPAERYQPWLDRLLAMSWDDSEHRKI 241
+ A + E+ ++ TD + HC+FT E + + + L M + + H+++
Sbjct 179 YKAWILDGTLDEAQVQILSETDFFDHCIFTGRADFSKEAFAHFTEVLHKMDYKNPAHKEM 238
Query 242 LELEGLRRWVPPHLDGYKPLFEA 264
+++EGL+ WVP ++ + +A
Sbjct 239 MDMEGLKAWVPGRTKNFEQIKKA 261
>gi|34558129|ref|NP_907944.1| hypothetical protein WS1830 [Wolinella succinogenes DSM 1740]
gi|34483847|emb|CAE10844.1| conserved hypothetical protein [Wolinella succinogenes]
Length=271
Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 150/270 (56%), Gaps = 9/270 (3%)
Query 1 MSTEPLVVGAVAYTPNVVPIWEGIRGYFQDSESPDTQMDFVLYSNYARLVDSLIAGHIDI 60
MS + +GAV Y P V IW I +F+++ +++ + + +Y VD+L+ G IDI
Sbjct 1 MSQNAITIGAVIYDPKVTVIWGIIADFFKENA---LEVEPLFFKDYQAQVDALLKGEIDI 57
Query 61 AWNTNLAYVRTVLQTGGRCTPLAQRDTDVDYTTVFVAHAGSDLHGAKDIAGKRLALGSAD 120
AWN+ LA+V +++ RC A RDTD + ++F+ A S + +++ GK++A G+ D
Sbjct 58 AWNSPLAWVDADIRSHHRCLKSAMRDTDQNRKSLFLVQAKSGIKNLQELQGKKIAFGAID 117
Query 121 SAHAAILPLYYLRRAG-IAESDLQVIRFDTDIGKHGDTGRSELDAVDAVLAGEADVAA-- 177
S A ++P+ +L R G +A D + + F+ G HGD E DA++A+ +G + +
Sbjct 118 SPQARLIPINHLARKGLVASKDYEEVIFNIGYGLHGDHVGGERDALEALKSGSVEASVCL 177
Query 178 -IGSSTWAAMGAAELMGESLTEVWRTDGYCHCMFTALDTLPAERYQPWLDRLLAMSWDDS 236
+ W G + + + + T + HC+FT + +R + W + L M +++
Sbjct 178 DLNYEAWVKDGTID--EKQILLIDETPLFDHCIFTVREGFAPDRLKAWEEVLFRMDYNNP 235
Query 237 EHRKILELEGLRRWVPPHLDGYKPLFEAVQ 266
+H++++++EGL+ WV G++ L EAV+
Sbjct 236 KHKEMMDMEGLKAWVQGRTSGFEQLKEAVE 265
>gi|227873648|ref|ZP_03991885.1| phosphonate ABC superfamily ATP binding cassette transporter
substrate-binding protein [Oribacterium sinus F0268]
gi|227840519|gb|EEJ50912.1| phosphonate ABC superfamily ATP binding cassette transporter
substrate-binding protein [Oribacterium sinus F0268]
Length=273
Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 85/263 (33%), Positives = 138/263 (53%), Gaps = 5/263 (1%)
Query 4 EPLVVGAVAYTPNVVPIWEGIRGYFQDSESPDTQMDFVLYSNYARLVDSLIAGHIDIAWN 63
E + +GAV Y P V IW I+ +F+ P ++ V Y +Y VD L+ G IDIAWN
Sbjct 2 EKIKLGAVIYAPKVTVIWGIIQEFFEQENCP---IEPVFYKDYKSQVDGLMNGEIDIAWN 58
Query 64 TNLAYVRTVLQTGGRCTPLAQRDTDVDYTTVFVAHAGSDLHGAKDIAGKRLALGSADSAH 123
+ LA++ + L+T G C + RDTD D + V DI GK + G+ DS
Sbjct 59 SPLAWLDSYLRTKGECLNGSMRDTDQDRKSYLVVRKDKGYQTISDIKGKTIGFGAYDSPQ 118
Query 124 AAILPLYYLRRAGIA-ESDLQVIRFDTDIGKHGDTGRSELDAVDAVLAGEADVAAIGSST 182
A ++P+ +L + G+ E D RFD +G HGD ELDA A+L+GE D + +
Sbjct 119 ARLIPICHLHKNGLEFEKDYTEKRFDIGLGLHGDHVGGELDAAKAMLSGEVDGSWMLDLN 178
Query 183 WAAMGAAELMGESLTEVW-RTDGYCHCMFTALDTLPAERYQPWLDRLLAMSWDDSEHRKI 241
+ A + E+ ++ TD + HC+FT E + + + L M +++ H+++
Sbjct 179 YKAWILDGTLDEAQVQILSETDFFDHCIFTGRADFSKEAFAHFTEVLHKMDYNNPAHKEM 238
Query 242 LELEGLRRWVPPHLDGYKPLFEA 264
+++EGL+ WVP ++ + +A
Sbjct 239 MDMEGLKAWVPGRTKNFEQIKKA 261
>gi|297587641|ref|ZP_06946285.1| phosphonate ABC superfamily ATP binding cassette transporter
substrate-binding protein [Finegoldia magna ATCC 53516]
gi|297574330|gb|EFH93050.1| phosphonate ABC superfamily ATP binding cassette transporter
substrate-binding protein [Finegoldia magna ATCC 53516]
Length=275
Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 86/268 (33%), Positives = 149/268 (56%), Gaps = 6/268 (2%)
Query 4 EPLVVGAVAYTPNVVPIWEGIRGYFQDSESPDTQMDFVLYSNYARLVDSLIAGHIDIAWN 63
+ L +GAV Y P V IWE I +F+++ + +++ V + +Y VD+L++G ID AWN
Sbjct 2 KKLKIGAVIYAPRVTVIWEMIEEFFKENGA---EIEGVFFKDYKLQVDALMSGEIDGAWN 58
Query 64 TNLAYVRTVLQTGGRCTPLAQRDTDVDYTTVFVAHAGSDLHGAKDIAGKRLALGSADSAH 123
+ LA++ L++ G+ RDTD D T V GS D+ GK + G+ DS
Sbjct 59 SPLAHLDAHLRSEGKDKIGCMRDTDRDKKTYLVVKKGS-FEKVSDLKGKTIGFGAIDSPQ 117
Query 124 AAILPLYYLRRAGIAE-SDLQVIRFDTDIGKHGDTGRSELDAVDAVLAGEADVAAIGSST 182
A ++P+ YL + G+ D RFD +G HGD E D++ A++ GE D + S+
Sbjct 118 ARLIPINYLHQNGLEYGKDYTEKRFDIGVGLHGDHVGGEKDSMIAMVNGEVDASFCLSTN 177
Query 183 WAAMGAAELMGESLTEVW-RTDGYCHCMFTALDTLPAERYQPWLDRLLAMSWDDSEHRKI 241
+ A + + ++ EV +TD + HC+FT + E + + D + M +++ + ++I
Sbjct 178 YDAWISDGTLDKNEVEVLDKTDNFDHCIFTFNPEVSDEDIKAFDDIMFKMDYNNEKEKEI 237
Query 242 LELEGLRRWVPPHLDGYKPLFEAVQEQG 269
++LEGL++W+P +G+K + EA + G
Sbjct 238 MDLEGLKQWIPGRREGFKQITEANEYLG 265
>gi|160947213|ref|ZP_02094380.1| hypothetical protein PEPMIC_01146 [Parvimonas micra ATCC 33270]
gi|158446347|gb|EDP23342.1| hypothetical protein PEPMIC_01146 [Parvimonas micra ATCC 33270]
Length=273
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/263 (32%), Positives = 141/263 (54%), Gaps = 9/263 (3%)
Query 6 LVVGAVAYTPNVVPIWEGIRGYFQDSESPDTQMDFVLYSNYARLVDSLIAGHIDIAWNTN 65
L VGAV Y P V IW I +F++ +++ + Y +Y VD L+ G ID+AWN+
Sbjct 4 LKVGAVVYAPRVTVIWGIIADFFKEE---GFEIEPIYYKDYRSQVDGLMKGEIDVAWNSP 60
Query 66 LAYVRTVLQTGGRCTPLAQRDTDVDYTTVFVAHAGSDLHGAKDIAGKRLALGSADSAHAA 125
LA++ L+T G+ + RDTD D +T V S++ +D+ GK + G+ DS A
Sbjct 61 LAWLDANLRTNGKALNGSMRDTDNDRSTYLVVKKSSNIKSIEDLKGKMIGFGAIDSPQAR 120
Query 126 ILPLYYLRRAGIA-ESDLQVIRFDTDIGKHGDTGRSELDAVDAVLAGEAD---VAAIGSS 181
++P+Y L + G+ D RFD IG HGD ELD+ A+L GE D + +
Sbjct 121 LIPIYNLYQHGLEFNKDYVEKRFDIGIGLHGDHVGGELDSAKAMLNGEVDATWMLDLNYD 180
Query 182 TWAAMGAAELMGESLTEVWRTDGYCHCMFTALDTLPAERYQPWLDRLLAMSWDDSEHRKI 241
W G + + +++T + HC+F+ L E+++ + L M +++ EH+++
Sbjct 181 AWIQDGTID--KNQVDIIYKTPFFDHCIFSGRPDLKVEKFEMFAKILHKMDYNNPEHKEM 238
Query 242 LELEGLRRWVPPHLDGYKPLFEA 264
+++EGL++WV G++ + A
Sbjct 239 MDMEGLKKWVIGRTTGFEQIKNA 261
>gi|329766788|ref|ZP_08258318.1| hypothetical protein HMPREF0428_00015 [Gemella haemolysans M341]
gi|328839299|gb|EGF88881.1| hypothetical protein HMPREF0428_00015 [Gemella haemolysans M341]
Length=274
Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 82/261 (32%), Positives = 139/261 (54%), Gaps = 5/261 (1%)
Query 6 LVVGAVAYTPNVVPIWEGIRGYFQDSESPDTQMDFVLYSNYARLVDSLIAGHIDIAWNTN 65
L VGAV Y P V IW I +F+D P ++ V Y +Y VD L++ ID+AWN+
Sbjct 4 LKVGAVIYDPKVTVIWGIIAKFFEDENFP---IEPVYYKDYKTQVDGLLSREIDVAWNSP 60
Query 66 LAYVRTVLQTGGRCTPLAQRDTDVDYTTVFVAHAGSDLHGAKDIAGKRLALGSADSAHAA 125
LA++ T L+T G + RDTD D ++ V + ++ D+ GK + G+ DS A
Sbjct 61 LAWLDTYLRTNGTSLNGSMRDTDRDRSSYLVVKSNKNIESINDLKGKTIGFGAIDSPQAR 120
Query 126 ILPLYYLRRAGIA-ESDLQVIRFDTDIGKHGDTGRSELDAVDAVLAGEADVAAIGSSTWA 184
++P+ +L + G+ E D RFD +G HGD ELD+ A+ E D + +
Sbjct 121 LIPINHLHKNGLEFEKDYIEKRFDIGVGLHGDHVGGELDSAIALKNDEVDATWMLDLNYK 180
Query 185 AMGAAELMGESLTEVW-RTDGYCHCMFTALDTLPAERYQPWLDRLLAMSWDDSEHRKILE 243
A + + E+ + +TD + HC+F+ L ++ +++ L M +++ H+++++
Sbjct 181 AWISDGTLDENQVNILSKTDFFDHCIFSGHPELEVTIFEKFIEVLHKMDYNNPSHKEMMD 240
Query 244 LEGLRRWVPPHLDGYKPLFEA 264
+EGL+ W+ G+K L EA
Sbjct 241 MEGLKEWISGRTSGFKQLTEA 261
>gi|241889545|ref|ZP_04776844.1| putative phosphonate ABC transporter substrate-binding protein
[Gemella haemolysans ATCC 10379]
gi|241863852|gb|EER68235.1| putative phosphonate ABC transporter substrate-binding protein
[Gemella haemolysans ATCC 10379]
Length=274
Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 89/266 (34%), Positives = 145/266 (55%), Gaps = 15/266 (5%)
Query 6 LVVGAVAYTPNVVPIWEGIRGYFQDSESPDTQMDFVLYSNYARLVDSLIAGHIDIAWNTN 65
L VGAV Y P V IW I +F+D P ++ V Y +Y VD L+A ID+AWN+
Sbjct 4 LKVGAVIYDPKVTVIWGIIAKFFEDENFP---IEPVYYKDYKGQVDGLLAKEIDVAWNSP 60
Query 66 LAYVRTVLQTGGRCTPLAQRDTDVDYTTVFVAHAGSDLHGAKDIAGKRLALGSADSAHAA 125
LA++ T L+T G + RDTD D ++ V A S+++ +D+ K + G+ DS A
Sbjct 61 LAWLDTHLRTNGTALNGSMRDTDRDRSSYLVVKANSNINSIQDLRNKTIGFGAIDSPQAR 120
Query 126 ILPLYYLRRAGIA-ESDLQVIRFDTDIGKHGDTGRSELDAVDAVLAGEADVAA-----IG 179
++P+ +L + G+ D RFD +G HGD ELD+ AV +VAA +
Sbjct 121 LIPINHLHKLGLEFGKDYTEKRFDIGVGLHGDHVGGELDS--AVALKNDEVAATWMLDLN 178
Query 180 SSTWAAMGAAELMGESLTEVW-RTDGYCHCMFTALDTLPAERYQPWLDRLLAMSWDDSEH 238
+ W A G + E+ ++ +TD + HC+F+ L ++ +++ L M +++ EH
Sbjct 179 YNAWIADGT---LDENQVKILSKTDFFDHCIFSGHPELDVAHFEKFIEVLHKMDYNNPEH 235
Query 239 RKILELEGLRRWVPPHLDGYKPLFEA 264
++++++EGL+ WV G+K L EA
Sbjct 236 KEMMDMEGLKEWVSGRTSGFKQLTEA 261
>gi|169824084|ref|YP_001691695.1| putative phosphonate ABC transporter substrate-binding protein
[Finegoldia magna ATCC 29328]
gi|167830889|dbj|BAG07805.1| putative phosphonate ABC transporter substrate-binding protein
[Finegoldia magna ATCC 29328]
gi|341591243|gb|EGS34451.1| ABC transporter, substrate-binding protein, family 3 [Finegoldia
magna SY403409CC001050417]
Length=275
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/268 (32%), Positives = 140/268 (53%), Gaps = 6/268 (2%)
Query 4 EPLVVGAVAYTPNVVPIWEGIRGYFQDSESPDTQMDFVLYSNYARLVDSLIAGHIDIAWN 63
+ L VGAV Y P V IW+ I +++++ + +++ V + +Y VD+L+ G ID AWN
Sbjct 2 KKLKVGAVIYAPRVTVIWDLITKFYEENGA---EIEAVFFKDYKLQVDALMNGEIDAAWN 58
Query 64 TNLAYVRTVLQTGGRCTPLAQRDTDVDYTTVFVAHAGSDLHGAKDIAGKRLALGSADSAH 123
+ LA + L++ G+ RDTD D T V G D+ GK + G+ DS
Sbjct 59 SPLAQLDAHLRSEGKEKIGCMRDTDRDRKTYLVVKKGK-FENISDLKGKTIGFGAIDSPQ 117
Query 124 AAILPLYYLRRAGIA-ESDLQVIRFDTDIGKHGDTGRSELDAVDAVLAGEADVAAIGSST 182
A ++P+ +L G+ D RFD +G HGD E D++ A++ GE D
Sbjct 118 ARLIPINFLHNNGLEFGKDYTDKRFDIGVGLHGDHVGGEKDSMMAMVNGEVDATFCLDLN 177
Query 183 WAAMGAAELMGESLTEVW-RTDGYCHCMFTALDTLPAERYQPWLDRLLAMSWDDSEHRKI 241
+ A + + ++ EV +TD + HC+FT E + + D + M +++ ++I
Sbjct 178 YDAWISDGTIDKNEVEVLAKTDYFDHCVFTFTPETSDEDIKAFDDIMFKMDYNNERDKEI 237
Query 242 LELEGLRRWVPPHLDGYKPLFEAVQEQG 269
++LEGL++WVP DG+K + EA + G
Sbjct 238 MDLEGLKQWVPGRRDGFKQITEANEYLG 265
>gi|303235265|ref|ZP_07321883.1| conserved hypothetical protein [Finegoldia magna BVS033A4]
gi|302493579|gb|EFL53367.1| conserved hypothetical protein [Finegoldia magna BVS033A4]
Length=275
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/260 (32%), Positives = 136/260 (53%), Gaps = 6/260 (2%)
Query 4 EPLVVGAVAYTPNVVPIWEGIRGYFQDSESPDTQMDFVLYSNYARLVDSLIAGHIDIAWN 63
+ L VGAV Y P V IW+ I +++++ + +++ V + +Y VD+L+ G ID AWN
Sbjct 2 KKLKVGAVIYAPRVTVIWDLITKFYEENGA---EIEAVFFKDYKLQVDALMNGEIDAAWN 58
Query 64 TNLAYVRTVLQTGGRCTPLAQRDTDVDYTTVFVAHAGSDLHGAKDIAGKRLALGSADSAH 123
+ LA + L++ G+ RDTD D T V G D+ GK + G+ DS
Sbjct 59 SPLAQLDAHLRSEGKEKIGCMRDTDRDRKTYLVVKKGK-FENISDLKGKTIGFGAIDSPQ 117
Query 124 AAILPLYYLRRAGIA-ESDLQVIRFDTDIGKHGDTGRSELDAVDAVLAGEADVAAIGSST 182
A ++P+ +L G+ D RFD +G HGD E D++ A++ GE D
Sbjct 118 ARLIPINFLHNNGLEFGKDYTDKRFDIGVGLHGDHVGGEKDSMMAMVNGEVDATFCLDLN 177
Query 183 WAAMGAAELMGESLTEVW-RTDGYCHCMFTALDTLPAERYQPWLDRLLAMSWDDSEHRKI 241
+ A + + ++ EV +TD + HC+FT E + + D + M +++ ++I
Sbjct 178 YDAWISDGTIDKNEVEVLAKTDYFDHCVFTFTPETSDEDIKEFDDIMFKMDYNNERDKEI 237
Query 242 LELEGLRRWVPPHLDGYKPL 261
++LEGL++WVP DG+K +
Sbjct 238 MDLEGLKQWVPGRRDGFKQI 257
>gi|302381077|ref|ZP_07269537.1| conserved hypothetical protein [Finegoldia magna ACS-171-V-Col3]
gi|302311124|gb|EFK93145.1| conserved hypothetical protein [Finegoldia magna ACS-171-V-Col3]
Length=275
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/260 (32%), Positives = 135/260 (52%), Gaps = 6/260 (2%)
Query 4 EPLVVGAVAYTPNVVPIWEGIRGYFQDSESPDTQMDFVLYSNYARLVDSLIAGHIDIAWN 63
+ L VGAV Y P V IW+ I +++++ + +++ V + +Y VD+L+ G ID AWN
Sbjct 2 KKLKVGAVIYAPRVTVIWDLITKFYEENGA---EIEAVFFKDYKLQVDALMNGEIDAAWN 58
Query 64 TNLAYVRTVLQTGGRCTPLAQRDTDVDYTTVFVAHAGSDLHGAKDIAGKRLALGSADSAH 123
+ LA + L++ G+ RDTD D T V G D+ GK + G+ DS
Sbjct 59 SPLAQLDAHLRSEGKEKIGCMRDTDRDRKTYLVVKKGK-FENISDLKGKTIGFGAIDSPQ 117
Query 124 AAILPLYYLRRAGIA-ESDLQVIRFDTDIGKHGDTGRSELDAVDAVLAGEADVAAIGSST 182
A ++P+ +L G+ D RFD +G HGD E D++ A++ GE D
Sbjct 118 ARLIPINFLHNNGLEFGKDYTDKRFDIGVGLHGDHVGGEKDSMMAMVNGEVDATFCLDLN 177
Query 183 WAAMGAAELMGESLTEVW-RTDGYCHCMFTALDTLPAERYQPWLDRLLAMSWDDSEHRKI 241
+ A + ++ EV +TD + HC+FT E + + D + M +++ ++I
Sbjct 178 YDAWINDGTIDKNEVEVLAKTDYFDHCVFTFTPETSDEDIKEFDDIMFKMDYNNERDKEI 237
Query 242 LELEGLRRWVPPHLDGYKPL 261
++LEGL++WVP DG+K +
Sbjct 238 MDLEGLKQWVPGRRDGFKQI 257
>gi|341952729|gb|EGT79250.1| putative phosphonate ABC transporter substrate-binding protein
[Haemophilus haemolyticus M21639]
Length=268
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/265 (31%), Positives = 139/265 (53%), Gaps = 14/265 (5%)
Query 3 TEPLVVGAVAYTPNVVPIWEGIRGYFQDSESPDTQMDFVLYSNYARLVDSLIAGHIDIAW 62
+E L +GAV Y P V IW I +F+ P ++ V + +Y VD+L+ ID+AW
Sbjct 2 SEKLKIGAVIYAPQVTVIWGIIANFFEKEGFP---IEPVYFKDYKGQVDALLNNEIDVAW 58
Query 63 NTNLAYVRTVLQTGGRCTPLAQRDTDVDYTTVFVAHAGSDLHGAKDIAGKRLALGSADSA 122
N+ LA++ L++GG+ A RDTD D + V + ++ +D+ K +A G+ DS
Sbjct 59 NSPLAWLDGYLRSGGKTLNGAMRDTDQDRQSYLVVN-DPNIQSIEDLKNKTIAFGAIDSP 117
Query 123 HAAILPLYYLRRAGIA-ESDLQVIRFDTDIGKHGDTGRSELDAVDAVLAGEADVAA---- 177
A ++P+ +L + G+ + D RFD +G HGD ELDA +A+ + VAA
Sbjct 118 QARLIPIKFLHQHGLEFDQDYVEKRFDVGVGLHGDHVGGELDAANAL--KDRQVAATWML 175
Query 178 -IGSSTWAAMGAAELMGESLTEVWRTDGYCHCMFTALDTLPAERYQPWLDRLLAMSWDDS 236
W G L ++ + +T + HC+F+ L ++ + + L M +++
Sbjct 176 DFNFERWTKDGT--LDPATVRVLAKTPSFDHCIFSGRVGLDETKFNAFTETLFKMDYNNP 233
Query 237 EHRKILELEGLRRWVPPHLDGYKPL 261
EH+++++LEGL+RWV G+ L
Sbjct 234 EHKEMMDLEGLKRWVAGRTKGFAQL 258
>gi|341950213|gb|EGT76802.1| putative phosphonate ABC transporter substrate-binding protein
[Haemophilus haemolyticus M21127]
Length=268
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/265 (32%), Positives = 139/265 (53%), Gaps = 14/265 (5%)
Query 3 TEPLVVGAVAYTPNVVPIWEGIRGYFQDSESPDTQMDFVLYSNYARLVDSLIAGHIDIAW 62
+E L +GAV Y P V IW I +F+ P ++ V + +Y VD+L+ ID+AW
Sbjct 2 SEKLKIGAVIYAPQVTVIWGIIADFFEKEGFP---IEPVYFKDYKGQVDALLNNEIDVAW 58
Query 63 NTNLAYVRTVLQTGGRCTPLAQRDTDVDYTTVFVAHAGSDLHGAKDIAGKRLALGSADSA 122
N+ LA++ L++GG+ A RDTD D + V + ++ +D+ K +A G+ DS
Sbjct 59 NSPLAWLDGYLRSGGKTLNGAMRDTDQDRQSYLVVN-DPNIQSIEDLKNKTIAFGAIDSP 117
Query 123 HAAILPLYYLRRAGIA-ESDLQVIRFDTDIGKHGDTGRSELDAVDAVLAGEADVAA---- 177
A ++P+ +L + G+ D RFD +G HGD ELDAV+A+ + VAA
Sbjct 118 QARLIPIEFLHQHGLEFGQDYVEKRFDVGVGLHGDHVGGELDAVNAL--KDRQVAATWML 175
Query 178 -IGSSTWAAMGAAELMGESLTEVWRTDGYCHCMFTALDTLPAERYQPWLDRLLAMSWDDS 236
W G L ++ + +T + HC+F+ L ++ + + L M +++
Sbjct 176 DFNFERWTKDGT--LDPATVRVLAKTPSFDHCIFSGRMGLDETKFNAFTETLFKMDYNNP 233
Query 237 EHRKILELEGLRRWVPPHLDGYKPL 261
EH+++++LEGL+RWV G+ L
Sbjct 234 EHKEMMDLEGLKRWVAGRTKGFAQL 258
>gi|342904065|ref|ZP_08725867.1| putative phosphonate ABC transporter substrate-binding protein
[Haemophilus haemolyticus M21621]
gi|342904633|ref|ZP_08726432.1| putative phosphonate ABC transporter substrate-binding protein
[Haemophilus haemolyticus M21621]
gi|341953054|gb|EGT79568.1| putative phosphonate ABC transporter substrate-binding protein
[Haemophilus haemolyticus M21621]
gi|341954074|gb|EGT80568.1| putative phosphonate ABC transporter substrate-binding protein
[Haemophilus haemolyticus M21621]
Length=268
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/265 (31%), Positives = 138/265 (53%), Gaps = 14/265 (5%)
Query 3 TEPLVVGAVAYTPNVVPIWEGIRGYFQDSESPDTQMDFVLYSNYARLVDSLIAGHIDIAW 62
+E L +GAV Y P V IW I +F+ P ++ V + +Y VD+L+ ID+AW
Sbjct 2 SEKLKIGAVIYAPQVTVIWGIIADFFEKEGFP---IEPVYFKDYKGQVDALLNNEIDVAW 58
Query 63 NTNLAYVRTVLQTGGRCTPLAQRDTDVDYTTVFVAHAGSDLHGAKDIAGKRLALGSADSA 122
N+ LA++ L++GG+ A RDTD D + V + ++ +D+ K +A G+ DS
Sbjct 59 NSPLAWLDGYLRSGGKTLNGAMRDTDQDRQSYLVIN-DPNIQSIEDLKNKTIAFGAIDSP 117
Query 123 HAAILPLYYLRRAGIA-ESDLQVIRFDTDIGKHGDTGRSELDAVDAVLAGEADVAA---- 177
A ++P+ +L + G+ D RFD +G HGD ELDA +A+ + VAA
Sbjct 118 QARLIPIEFLHQHGLEFGQDYVEKRFDVGVGLHGDHVGGELDAANAL--KDRQVAATWML 175
Query 178 -IGSSTWAAMGAAELMGESLTEVWRTDGYCHCMFTALDTLPAERYQPWLDRLLAMSWDDS 236
W G L ++ + +T + HC+F+ L ++ + + L M +++
Sbjct 176 DFNFERWTKDGT--LDPATVQVLAKTPSFDHCIFSGRVGLDETKFNAFTETLFKMDYNNP 233
Query 237 EHRKILELEGLRRWVPPHLDGYKPL 261
EH+++++LEGL+RWV G+ L
Sbjct 234 EHKEMMDLEGLKRWVAGRTKGFAQL 258
>gi|341950631|gb|EGT77218.1| putative phosphonate ABC transporter substrate-binding protein
[Haemophilus haemolyticus M19501]
Length=268
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/265 (31%), Positives = 138/265 (53%), Gaps = 14/265 (5%)
Query 3 TEPLVVGAVAYTPNVVPIWEGIRGYFQDSESPDTQMDFVLYSNYARLVDSLIAGHIDIAW 62
+E L +GAV Y P V IW I +F+ P ++ V + +Y VD+L+ ID+AW
Sbjct 2 SEKLKIGAVIYAPQVTVIWGIIADFFEKEGFP---IEPVYFKDYKGQVDALLNNEIDVAW 58
Query 63 NTNLAYVRTVLQTGGRCTPLAQRDTDVDYTTVFVAHAGSDLHGAKDIAGKRLALGSADSA 122
N+ LA++ L++GG+ A RDTD D + V + + + +D+ K +A G+ DS
Sbjct 59 NSPLAWLDGYLRSGGKTLNGAMRDTDQDRQSYLVVNDPT-IQSIEDLKNKTIAFGAIDSP 117
Query 123 HAAILPLYYLRRAGIA-ESDLQVIRFDTDIGKHGDTGRSELDAVDAVLAGEADVAA---- 177
A ++P+ +L + G+ D RFD +G HGD ELDA +A+ + VAA
Sbjct 118 QARLIPIEFLHQHGLEFGQDYVEKRFDVGVGLHGDHVGGELDAANAL--KDRQVAATWML 175
Query 178 -IGSSTWAAMGAAELMGESLTEVWRTDGYCHCMFTALDTLPAERYQPWLDRLLAMSWDDS 236
W G L ++ + +T + HC+F+ L ++ + + L M +++
Sbjct 176 DFNFERWTKDGT--LDPATVRVLAKTPSFDHCIFSGRVGLDETKFNAFTETLFKMDYNNP 233
Query 237 EHRKILELEGLRRWVPPHLDGYKPL 261
EH+++++LEGL+RWV G+ L
Sbjct 234 EHKEMMDLEGLKRWVAGRTKGFGQL 258
>gi|154148910|ref|YP_001406724.1| hypothetical protein CHAB381_1169 [Campylobacter hominis ATCC
BAA-381]
gi|153804919|gb|ABS51926.1| conserved hypothetical protein [Campylobacter hominis ATCC BAA-381]
Length=263
Score = 132 bits (332), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 68/260 (27%), Positives = 142/260 (55%), Gaps = 6/260 (2%)
Query 6 LVVGAVAYTPNVVPIWEGIRGYFQDSESPDTQMDFVLYSNYARLVDSLIAGHIDIAWNTN 65
+ + AV Y P V IW I +F+ + D ++ V + +Y VD+L+AG +D+AWN+
Sbjct 1 MKLAAVIYDPKVTIIWGIISDFFKQN---DFELKPVFFKDYKMQVDALMAGEVDVAWNSP 57
Query 66 LAYVRTVLQTGGRCTPLAQRDTDVDYTTVFVAHAGSDLHGAKDIAGKRLALGSADSAHAA 125
LA++ T L++ G+ + RDTD++ +T + D+ G+++ G+ DS A
Sbjct 58 LAWLDTFLRSNGKSLNGSMRDTDINRSTYLIV-KDEKFKTINDLKGEKIGFGAIDSPQAR 116
Query 126 ILPLYYLRRAGIAE-SDLQVIRFDTDIGKHGDTGRSELDAVDAVLAGEADVAAIGSSTWA 184
++P+Y L + G+ + + +RFD +G +GD EL++ A+L E + + +
Sbjct 117 LIPIYNLHQNGLEYGTHYKEVRFDVGVGLNGDHIGGELESAKALLKDEVSASWMLDMNYE 176
Query 185 AMGAAELMGESLTEVWRTDGYCHCMFTALDTLPAERYQPWLDRLLAMSWDDSEHRKILEL 244
+ E++ +++T + HC+F++ L + + + + L M +++ +H++++++
Sbjct 177 RYTNDGTL-ENVRVIYKTPHFDHCIFSSRIGLDKKEFAKFNEILCKMDYENQKHKEMMDM 235
Query 245 EGLRRWVPPHLDGYKPLFEA 264
EGL++WV G+ + +A
Sbjct 236 EGLKKWVSARTSGFLQITKA 255
>gi|341951859|gb|EGT78411.1| putative phosphonate ABC transporter substrate-binding protein
[Haemophilus haemolyticus M19107]
Length=268
Score = 132 bits (331), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 81/265 (31%), Positives = 138/265 (53%), Gaps = 14/265 (5%)
Query 3 TEPLVVGAVAYTPNVVPIWEGIRGYFQDSESPDTQMDFVLYSNYARLVDSLIAGHIDIAW 62
+E L +GAV Y P V IW I +F+ P ++ V + +Y VD+L+ ID+AW
Sbjct 2 SEKLKIGAVIYAPQVTVIWGIIADFFEKEGFP---IEPVYFKDYKGQVDALLNNEIDMAW 58
Query 63 NTNLAYVRTVLQTGGRCTPLAQRDTDVDYTTVFVAHAGSDLHGAKDIAGKRLALGSADSA 122
N+ LA++ L++ G+ A RDTD D + V + + + +D+ K +A G+ DS
Sbjct 59 NSPLAWLDGYLRSAGKTLNGAMRDTDQDRQSYLVVNDPA-IQSIEDLKNKTIAFGAIDSP 117
Query 123 HAAILPLYYLRRAGIA-ESDLQVIRFDTDIGKHGDTGRSELDAVDAVLAGEADVAA---- 177
A ++P+ +L + G+ D RFD +G HGD ELDA +A+ + VAA
Sbjct 118 QARLIPIEFLHQHGLEFGQDYVEKRFDVGVGLHGDHVGGELDAANAL--KDRQVAATWML 175
Query 178 -IGSSTWAAMGAAELMGESLTEVWRTDGYCHCMFTALDTLPAERYQPWLDRLLAMSWDDS 236
W G L ++ + +T + HC+F+ L ++ + + L M +++
Sbjct 176 DFNFERWTKDGT--LDPATVRVLAKTPSFDHCIFSGRVGLDETKFNAFTETLFKMDYNNP 233
Query 237 EHRKILELEGLRRWVPPHLDGYKPL 261
EH+++++LEGL+RWV +G+ L
Sbjct 234 EHKEMMDLEGLKRWVAGRTEGFAQL 258
>gi|300787605|ref|YP_003767896.1| ABC transporter substrate-binding protein [Amycolatopsis mediterranei
U32]
gi|299797119|gb|ADJ47494.1| ABC transport system substrate-binding protein [Amycolatopsis
mediterranei U32]
Length=223
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/217 (40%), Positives = 111/217 (52%), Gaps = 31/217 (14%)
Query 6 LVVGAVAYTPNVVPIWEGIRGYFQDSESPDTQMDFVLYSNYARLVDSLIAGHIDIAWNTN 65
L++GAVAY P VV IW G R + +D D+VLYSNY R + L+AG I AW++
Sbjct 3 LLLGAVAYDPKVVTIWSGFRDWLRDQ---GLAFDYVLYSNYERQTEDLVAGRIHAAWHSP 59
Query 66 LAYVRTVL---QTGGRCTPLAQRDTDVDYTTVFVAHAGSDLHGAKDIAGKRLALGSADSA 122
LA+VRT G PL RDTD D T+V V A + D+AG +ALG+ DS
Sbjct 60 LAWVRTCRLAKAEGQTIHPLVMRDTDRDLTSVIVTRADAPHRTLADLAGGTVALGAVDSP 119
Query 123 HAAILPLYYLRRAG-IAESDLQVIRFDTDIGKHGDTGRSELDAVDAVLAGEADVAAIGSS 181
A ++P LR+AG + ++ V RFD +G HGD E DA A+ G+ D AA+
Sbjct 120 QATLIPGALLRQAGLVGGKNVTVRRFDVGVGLHGDHIGGERDAARALATGDVDAAAM--- 176
Query 182 TWAAMGAAELMGESLTEVWRTDGYCHCMFTALDTLPA 218
TDG H +FT TLPA
Sbjct 177 --------------------TDGN-HLLFTREGTLPA 192
>gi|71907455|ref|YP_285042.1| phosphonate-binding periplasmic protein [Dechloromonas aromatica
RCB]
gi|71847076|gb|AAZ46572.1| Phosphonate-binding periplasmic protein [Dechloromonas aromatica
RCB]
Length=293
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/233 (28%), Positives = 110/233 (48%), Gaps = 13/233 (5%)
Query 40 FVLYSNYARLVDSLIAGHIDIAWNTNLAYVRTVLQTGGRCTPLAQRDTDVDYTTVFVAHA 99
F S+YA +V+SL ID+AW +V+ ++T G P+AQR+ D +T+ F+ A
Sbjct 70 FTPVSDYAAVVESLATKKIDLAWLGGFTFVQAKIRTNGTAIPIAQREEDAKFTSKFIT-A 128
Query 100 GSDLHGAKDIAGKRLALGSADSAHAAILPLYYLRRAGI-AESDLQVIRFDTDIGKHGDTG 158
+ D+ GK A G+ S +++P ++L++AG+ E D + + F G H T
Sbjct 129 DPSIKSLADLKGKTFAFGAPSSTSGSLMPRFFLQQAGLNPEKDFKNVAFS---GAHDAT- 184
Query 159 RSELDAVDAVLAGEADVAAIGSSTWAAMGAAELMGESLTEVW-RTDGYCHCMFTALDTLP 217
V V AG+A+ + +S W M A+ + V+ T Y +T L
Sbjct 185 ------VAFVAAGKAEAGVLNTSVWDKMVEAKKVDTDKVRVFATTPPYFDYNWTVRGDLD 238
Query 218 AERYQPWLDRLLAMSWDDSEHRKILELEGLRRWVPPHLDGYKPLFEAVQEQGI 270
+ D L + + EH++IL L+ +++P + Y + +A G+
Sbjct 239 PVIIKKLTDAFLKLDPANPEHKEILALQRAAKFIPTKKENYDGIEKAAHSAGL 291
>gi|222111204|ref|YP_002553468.1| phosphonate ABC transporter periplasmic phosphonate-binding protein
[Acidovorax ebreus TPSY]
gi|221730648|gb|ACM33468.1| phosphonate ABC transporter, periplasmic phosphonate-binding
protein [Acidovorax ebreus TPSY]
Length=296
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/242 (28%), Positives = 113/242 (47%), Gaps = 13/242 (5%)
Query 31 SESPDTQMDFVLYSNYARLVDSLIAGHIDIAWNTNLAYVRTVLQTGGRCTPLAQRDTDVD 90
S++ ++ F ++YA +V+SL +D+AW YV+ ++TGG PL QR+ D
Sbjct 64 SQATGMKVVFTPVTDYAAVVESLATRKLDLAWLGGFTYVQARIRTGGTAIPLVQREEDAR 123
Query 91 YTTVFVAHAGSDLHGAKDIAGKRLALGSADSAHAAILPLYYLRRAGI-AESDLQVIRFDT 149
+T+ F+ A + G D+ GK A G+ S +++P Y+L++AG+ E D + + +
Sbjct 124 FTSRFIT-ADPTIQGLADLKGKTFAFGAPSSTSGSLMPRYFLQQAGVQPERDFKTVAYS- 181
Query 150 DIGKHGDTGRSELDAVDAVLAGEADVAAIGSSTWAAMGAAELMGESLTEVW-RTDGYCHC 208
G H T V V AG+A + +S W + + + S V+ T Y
Sbjct 182 --GAHDAT-------VAFVAAGKAQAGVLNASVWDKLVETKKVDPSKVRVFATTPPYFDY 232
Query 209 MFTALDTLPAERYQPWLDRLLAMSWDDSEHRKILELEGLRRWVPPHLDGYKPLFEAVQEQ 268
+T L Q LA+ EH+ ILEL+ R++ Y + +A +
Sbjct 233 NWTVRGDLDPAVVQKIKAAFLALDPAKPEHKAILELQRASRFIATEPRNYDGIEDAAKTA 292
Query 269 GI 270
G+
Sbjct 293 GL 294
>gi|149924227|ref|ZP_01912601.1| Phosphonate-binding periplasmic protein [Plesiocystis pacifica
SIR-1]
gi|149814895|gb|EDM74459.1| Phosphonate-binding periplasmic protein [Plesiocystis pacifica
SIR-1]
Length=261
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/216 (28%), Positives = 99/216 (46%), Gaps = 10/216 (4%)
Query 38 MDFVLYSNYARLVDSLIAGHIDIAWNTNLAYVRTVLQTGGRCTPLAQRDTDVDYTTVFVA 97
+++V ++Y V +L+AG +D AW +V+ +T PL RD D D+ +VF+A
Sbjct 31 VEYVPVTDYGAAVQALVAGTVDFAWLGGFTHVQA--RTLAEVEPLVMRDIDRDFHSVFIA 88
Query 98 HAGSDLHGAKDIAGKRLALGSADSAHAAILPLYYLRRAGIAESDLQVIRFDTDIGKHGDT 157
+ S + D+ GKR A G+ S ++P ++L A + + G H T
Sbjct 89 NVDSGVEAIADLKGKRFAFGAKSSTSGHLMPRHFLVEAHAIDPERDFAGAPVYSGAHDAT 148
Query 158 GRSELDAVDAVLAGEADVAAIGSSTWA-AMGAAELMGESLTEVWRTDGYCHCMFTALDTL 216
V V +G+ D A+ W + A E+ ++ +W T GY +TA L
Sbjct 149 -------VVMVASGKVDAGALNMQVWERVLAAGEVDTSAVRVIWETPGYVDYTWTARSAL 201
Query 217 PAERYQPWLDRLLAMSWDDSEHRKILELEGLRRWVP 252
P + + L + D EHR IL+ G + +VP
Sbjct 202 PESTREAFKRAFLELDARDPEHRAILDRLGAKAYVP 237
>gi|160898779|ref|YP_001564361.1| phosphonate ABC transporter periplasmic phosphonate-binding protein
[Delftia acidovorans SPH-1]
gi|333915047|ref|YP_004488779.1| phosphonate ABC transporter periplasmic phosphonate-binding protein
[Delftia sp. Cs1-4]
gi|160364363|gb|ABX35976.1| phosphonate ABC transporter, periplasmic phosphonate-binding
protein [Delftia acidovorans SPH-1]
gi|333745247|gb|AEF90424.1| phosphonate ABC transporter, periplasmic phosphonate-binding
protein [Delftia sp. Cs1-4]
Length=294
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/233 (28%), Positives = 108/233 (47%), Gaps = 13/233 (5%)
Query 40 FVLYSNYARLVDSLIAGHIDIAWNTNLAYVRTVLQTGGRCTPLAQRDTDVDYTTVFVAHA 99
F ++YA +V+SL +D+AW +V+ ++T G P+ QR+ D +T+ F+ A
Sbjct 71 FTPVTDYAAVVESLATRKLDLAWLGGFTFVQAKIRTNGTAIPIVQREEDAKFTSKFIT-A 129
Query 100 GSDLHGAKDIAGKRLALGSADSAHAAILPLYYLRRAGI-AESDLQVIRFDTDIGKHGDTG 158
+ D+ GK A G+ S +++P ++L++ GI E D + + F G H T
Sbjct 130 NPAIKTLADLKGKSFAFGAPSSTSGSLMPRFFLQQDGINPEKDFKTVAFS---GAHDAT- 185
Query 159 RSELDAVDAVLAGEADVAAIGSSTWAAMGAAELMGESLTEVW-RTDGYCHCMFTALDTLP 217
V V AG+A+ + +S W + + + S V+ T Y +T L
Sbjct 186 ------VAFVAAGKAEAGVLNASVWDKLVETKKVDTSKVRVFATTPPYFDYNWTVRGDLD 239
Query 218 AERYQPWLDRLLAMSWDDSEHRKILELEGLRRWVPPHLDGYKPLFEAVQEQGI 270
+ D LA+ EH+ ILEL+ R+VP Y+ + A + G+
Sbjct 240 PALVKKLTDAFLALDPAKPEHKAILELQRAARFVPTQASNYEGIEAAAKSAGL 292
>gi|121594062|ref|YP_985958.1| phosphonate ABC transporter periplasmic phosphonate-binding protein
[Acidovorax sp. JS42]
gi|120606142|gb|ABM41882.1| phosphonate ABC transporter, periplasmic phosphonate-binding
protein [Acidovorax sp. JS42]
Length=296
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/242 (28%), Positives = 113/242 (47%), Gaps = 13/242 (5%)
Query 31 SESPDTQMDFVLYSNYARLVDSLIAGHIDIAWNTNLAYVRTVLQTGGRCTPLAQRDTDVD 90
S++ ++ F ++YA +V+SL +D+AW YV+ ++TGG PL QR+ D
Sbjct 64 SQATGMKVVFTPVTDYAAVVESLATRKLDLAWLGGFTYVQARIRTGGTAIPLVQREEDAR 123
Query 91 YTTVFVAHAGSDLHGAKDIAGKRLALGSADSAHAAILPLYYLRRAGI-AESDLQVIRFDT 149
+T+ F+ A + G D+ GK A G+ S +++P Y+L++AG+ E D + + +
Sbjct 124 FTSRFIT-ADPAIQGLADLKGKTFAFGAPSSTSGSLMPRYFLQQAGVQPERDFKTVAYS- 181
Query 150 DIGKHGDTGRSELDAVDAVLAGEADVAAIGSSTWAAMGAAELMGESLTEVW-RTDGYCHC 208
G H T V V AG+A + +S W + + + S V+ T Y
Sbjct 182 --GAHDAT-------VAFVAAGKAQAGVLNASVWDKLVETKKVDPSKVRVFATTPPYFDY 232
Query 209 MFTALDTLPAERYQPWLDRLLAMSWDDSEHRKILELEGLRRWVPPHLDGYKPLFEAVQEQ 268
+T L Q LA+ EH+ ILEL+ R++ Y + +A +
Sbjct 233 NWTVRGDLDPAVVQKIKAAFLALDPAKPEHKAILELQRASRFIATEPRNYDGIEDAAKTA 292
Query 269 GI 270
G+
Sbjct 293 GL 294
>gi|239815055|ref|YP_002943965.1| phosphonate ABC transporter periplasmic phosphonate-binding protein
[Variovorax paradoxus S110]
gi|239801632|gb|ACS18699.1| phosphonate ABC transporter, periplasmic phosphonate-binding
protein [Variovorax paradoxus S110]
Length=285
Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/236 (27%), Positives = 113/236 (48%), Gaps = 13/236 (5%)
Query 37 QMDFVLYSNYARLVDSLIAGHIDIAWNTNLAYVRTVLQTGGRCTPLAQRDTDVDYTTVFV 96
+++F ++YA V++L +D+AW +V+ ++GG+ PL QR+ D + +VF+
Sbjct 59 KVEFTPVTDYAAAVEALANKQVDLAWLGGFTFVQASHRSGGKVVPLVQREEDEKFRSVFI 118
Query 97 AHAGSDLHGAKDIAGKRLALGSADSAHAAILPLYYLRRAGI-AESDLQVIRFDTDIGKHG 155
D+ D+ G+ L+ GS S ++P +L AGI + DL+ + + G H
Sbjct 119 T-TNPDIRSLADLKGRNLSFGSQSSTSGHLMPRSFLLAAGIDPDRDLKRVAYS---GAHD 174
Query 156 DTGRSELDAVDAVLAGEADVAAIGSSTWAAMGAAELMGESLTEV-WRTDGYCHCMFTALD 214
T V AV +G+ D A+ S W + A + + + V + T Y +T
Sbjct 175 AT-------VAAVASGKVDAGALNISVWDKLVADKKVDPAKVRVFYTTPAYYDYNWTVHA 227
Query 215 TLPAERYQPWLDRLLAMSWDDSEHRKILELEGLRRWVPPHLDGYKPLFEAVQEQGI 270
+PA R + + + +S E + IL L+ R+VP + YK + A + G+
Sbjct 228 DMPAARREQLVRAFIELSPATPEGKDILALQRATRFVPTRAENYKGIEAAARNAGL 283
Lambda K H
0.320 0.136 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 429277556614
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40