BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1681
Length=330
Score E
Sequences producing significant alignments: (Bits) Value
gi|308377797|ref|ZP_07480440.2| molybdopterin biosynthesis prote... 660 0.0
gi|15841138|ref|NP_336175.1| MoaA-related protein [Mycobacterium... 660 0.0
gi|15608819|ref|NP_216197.1| molybdopterin biosynthesis protein ... 659 0.0
gi|294996631|ref|ZP_06802322.1| molybdopterin biosynthesis prote... 658 0.0
gi|289757792|ref|ZP_06517170.1| molybdopterin biosynthesis prote... 657 0.0
gi|308375648|ref|ZP_07444630.2| molybdopterin biosynthesis prote... 652 0.0
gi|308380147|ref|ZP_07488858.2| molybdopterin biosynthesis prote... 650 0.0
gi|240171258|ref|ZP_04749917.1| MoaA-related protein [Mycobacter... 504 9e-141
gi|120406825|ref|YP_956654.1| radical SAM domain-containing prot... 465 5e-129
gi|88856676|ref|ZP_01131332.1| MoaA-related protein [marine acti... 330 2e-88
gi|289761836|ref|ZP_06521214.1| MoaA-related protein [Mycobacter... 297 1e-78
gi|309791200|ref|ZP_07685732.1| MoaA-related protein [Oscillochl... 197 1e-48
gi|89091892|ref|ZP_01164847.1| radical SAM domain protein [Ocean... 91.7 1e-16
gi|283781822|ref|YP_003372577.1| radical SAM domain-containing p... 88.6 1e-15
gi|87309369|ref|ZP_01091505.1| radical SAM domain protein [Blast... 88.6 1e-15
gi|149186397|ref|ZP_01864710.1| radical SAM domain protein [Eryt... 85.5 1e-14
gi|298373887|ref|ZP_06983845.1| radical SAM domain-containing pr... 84.7 2e-14
gi|339007172|ref|ZP_08639747.1| radical SAM domain protein [Brev... 83.6 4e-14
gi|94270164|ref|ZP_01291666.1| UbiE/COQ5 methyltransferase:Radic... 82.4 8e-14
gi|294778157|ref|ZP_06743588.1| radical SAM domain protein [Bact... 82.0 1e-13
gi|311696741|gb|ADP99614.1| radical SAM domain protein [Marinoba... 81.6 1e-13
gi|149377557|ref|ZP_01895297.1| radical SAM domain protein [Mari... 81.6 1e-13
gi|39937060|ref|NP_949336.1| coenzyme PQQ synthesis protein E [R... 81.6 1e-13
gi|302348326|ref|YP_003815964.1| Predicted Fe-S oxidoreductase [... 81.6 2e-13
gi|296282830|ref|ZP_06860828.1| radical SAM domain-containing pr... 80.5 3e-13
gi|336451346|ref|ZP_08621784.1| radical SAM superfamily enzyme [... 80.5 4e-13
gi|159041665|ref|YP_001540917.1| radical SAM domain-containing p... 80.5 4e-13
gi|297568659|ref|YP_003690003.1| Arsenite methyltransferase [Des... 80.1 4e-13
gi|86138318|ref|ZP_01056892.1| radical SAM domain protein [Roseo... 80.1 5e-13
gi|94264007|ref|ZP_01287808.1| UbiE/COQ5 methyltransferase:Radic... 79.7 5e-13
gi|154250870|ref|YP_001411694.1| radical SAM domain-containing p... 79.3 7e-13
gi|307594547|ref|YP_003900864.1| Radical SAM domain-containing p... 79.0 9e-13
gi|206900307|ref|YP_002251638.1| antilisterial bacteriocin subti... 79.0 1e-12
gi|322420709|ref|YP_004199932.1| Radical SAM domain-containing p... 79.0 1e-12
gi|218777947|ref|YP_002429265.1| radical SAM domain-containing p... 78.6 1e-12
gi|301167255|emb|CBW26837.1| putative molybdopterin biosynthesis... 78.6 1e-12
gi|339483734|ref|YP_004695520.1| Radical SAM domain-containing p... 78.2 2e-12
gi|254466456|ref|ZP_05079867.1| radical SAM domain protein [Rhod... 78.2 2e-12
gi|254511606|ref|ZP_05123673.1| radical SAM domain protein [Rhod... 78.2 2e-12
gi|218777874|ref|YP_002429192.1| family 2 glycosyl transferase [... 77.8 2e-12
gi|192292888|ref|YP_001993493.1| radical SAM domain-containing p... 77.4 3e-12
gi|148265581|ref|YP_001232287.1| radical SAM domain-containing p... 76.6 5e-12
gi|120553089|ref|YP_957440.1| radical SAM domain-containing prot... 76.6 6e-12
gi|170289717|ref|YP_001736533.1| radical SAM domain-containing p... 76.3 6e-12
gi|189499239|ref|YP_001958709.1| Radical SAM domain-containing p... 75.9 8e-12
gi|126731382|ref|ZP_01747189.1| radical SAM domain protein [Sagi... 75.9 9e-12
gi|210610643|ref|ZP_03288543.1| hypothetical protein CLONEX_0073... 75.5 1e-11
gi|55820959|ref|YP_139401.1| metallo cofactor biosynthesis prote... 75.1 1e-11
gi|325982629|ref|YP_004295031.1| Radical SAM domain-containing p... 74.7 2e-11
gi|341615940|ref|ZP_08702809.1| radical SAM domain-containing pr... 74.3 3e-11
>gi|308377797|ref|ZP_07480440.2| molybdopterin biosynthesis protein moeX [Mycobacterium tuberculosis
SUMu009]
gi|308354521|gb|EFP43372.1| molybdopterin biosynthesis protein moeX [Mycobacterium tuberculosis
SUMu009]
Length=355
Score = 660 bits (1703), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/330 (100%), Positives = 330/330 (100%), Gaps = 0/330 (0%)
Query 1 VIIELMRRVVGLAQGATAEVAVYGDRDRDLAERWCANTGNTLVRADVDQTGVGTLVVRRG 60
VIIELMRRVVGLAQGATAEVAVYGDRDRDLAERWCANTGNTLVRADVDQTGVGTLVVRRG
Sbjct 26 VIIELMRRVVGLAQGATAEVAVYGDRDRDLAERWCANTGNTLVRADVDQTGVGTLVVRRG 85
Query 61 HPPDPASVLGPDRLPGVRLWLYTNFHCNLCCDYCCVSSSPSTPHRELGAERIGRIVGEAA 120
HPPDPASVLGPDRLPGVRLWLYTNFHCNLCCDYCCVSSSPSTPHRELGAERIGRIVGEAA
Sbjct 86 HPPDPASVLGPDRLPGVRLWLYTNFHCNLCCDYCCVSSSPSTPHRELGAERIGRIVGEAA 145
Query 121 RWGVRELFLTGGEPFLLPDIDTIIATCVKQLPTTVLTNGMVFKGRGRRALESLPRGLALQ 180
RWGVRELFLTGGEPFLLPDIDTIIATCVKQLPTTVLTNGMVFKGRGRRALESLPRGLALQ
Sbjct 146 RWGVRELFLTGGEPFLLPDIDTIIATCVKQLPTTVLTNGMVFKGRGRRALESLPRGLALQ 205
Query 181 ISLDSATPELHDAHRGAGTWVKAVAGIRLALSLGFRVRVAATVASPAPGELTAFHDFLDG 240
ISLDSATPELHDAHRGAGTWVKAVAGIRLALSLGFRVRVAATVASPAPGELTAFHDFLDG
Sbjct 206 ISLDSATPELHDAHRGAGTWVKAVAGIRLALSLGFRVRVAATVASPAPGELTAFHDFLDG 265
Query 241 LGIAPGDQLVRPIALEGAASQGVALTRESLVPEVTVTADGVYWHPVAATDERALVTRTVE 300
LGIAPGDQLVRPIALEGAASQGVALTRESLVPEVTVTADGVYWHPVAATDERALVTRTVE
Sbjct 266 LGIAPGDQLVRPIALEGAASQGVALTRESLVPEVTVTADGVYWHPVAATDERALVTRTVE 325
Query 301 PLTPALDMVSRLFAEQWTRAAEEAALFPCA 330
PLTPALDMVSRLFAEQWTRAAEEAALFPCA
Sbjct 326 PLTPALDMVSRLFAEQWTRAAEEAALFPCA 355
>gi|15841138|ref|NP_336175.1| MoaA-related protein [Mycobacterium tuberculosis CDC1551]
gi|253799280|ref|YP_003032281.1| molybdopterin biosynthesis protein moeX [Mycobacterium tuberculosis
KZN 1435]
gi|254231876|ref|ZP_04925203.1| molybdopterin biosynthesis protein moeX [Mycobacterium tuberculosis
C]
25 more sequence titles
Length=331
Score = 660 bits (1702), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/330 (100%), Positives = 330/330 (100%), Gaps = 0/330 (0%)
Query 1 VIIELMRRVVGLAQGATAEVAVYGDRDRDLAERWCANTGNTLVRADVDQTGVGTLVVRRG 60
VIIELMRRVVGLAQGATAEVAVYGDRDRDLAERWCANTGNTLVRADVDQTGVGTLVVRRG
Sbjct 2 VIIELMRRVVGLAQGATAEVAVYGDRDRDLAERWCANTGNTLVRADVDQTGVGTLVVRRG 61
Query 61 HPPDPASVLGPDRLPGVRLWLYTNFHCNLCCDYCCVSSSPSTPHRELGAERIGRIVGEAA 120
HPPDPASVLGPDRLPGVRLWLYTNFHCNLCCDYCCVSSSPSTPHRELGAERIGRIVGEAA
Sbjct 62 HPPDPASVLGPDRLPGVRLWLYTNFHCNLCCDYCCVSSSPSTPHRELGAERIGRIVGEAA 121
Query 121 RWGVRELFLTGGEPFLLPDIDTIIATCVKQLPTTVLTNGMVFKGRGRRALESLPRGLALQ 180
RWGVRELFLTGGEPFLLPDIDTIIATCVKQLPTTVLTNGMVFKGRGRRALESLPRGLALQ
Sbjct 122 RWGVRELFLTGGEPFLLPDIDTIIATCVKQLPTTVLTNGMVFKGRGRRALESLPRGLALQ 181
Query 181 ISLDSATPELHDAHRGAGTWVKAVAGIRLALSLGFRVRVAATVASPAPGELTAFHDFLDG 240
ISLDSATPELHDAHRGAGTWVKAVAGIRLALSLGFRVRVAATVASPAPGELTAFHDFLDG
Sbjct 182 ISLDSATPELHDAHRGAGTWVKAVAGIRLALSLGFRVRVAATVASPAPGELTAFHDFLDG 241
Query 241 LGIAPGDQLVRPIALEGAASQGVALTRESLVPEVTVTADGVYWHPVAATDERALVTRTVE 300
LGIAPGDQLVRPIALEGAASQGVALTRESLVPEVTVTADGVYWHPVAATDERALVTRTVE
Sbjct 242 LGIAPGDQLVRPIALEGAASQGVALTRESLVPEVTVTADGVYWHPVAATDERALVTRTVE 301
Query 301 PLTPALDMVSRLFAEQWTRAAEEAALFPCA 330
PLTPALDMVSRLFAEQWTRAAEEAALFPCA
Sbjct 302 PLTPALDMVSRLFAEQWTRAAEEAALFPCA 331
>gi|15608819|ref|NP_216197.1| molybdopterin biosynthesis protein MoeX [Mycobacterium tuberculosis
H37Rv]
gi|31792867|ref|NP_855360.1| molybdopterin biosynthesis protein MoeX [Mycobacterium bovis
AF2122/97]
gi|121637588|ref|YP_977811.1| putative molybdopterin biosynthesis protein moeX [Mycobacterium
bovis BCG str. Pasteur 1173P2]
38 more sequence titles
Length=330
Score = 659 bits (1699), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/330 (99%), Positives = 330/330 (100%), Gaps = 0/330 (0%)
Query 1 VIIELMRRVVGLAQGATAEVAVYGDRDRDLAERWCANTGNTLVRADVDQTGVGTLVVRRG 60
+IIELMRRVVGLAQGATAEVAVYGDRDRDLAERWCANTGNTLVRADVDQTGVGTLVVRRG
Sbjct 1 MIIELMRRVVGLAQGATAEVAVYGDRDRDLAERWCANTGNTLVRADVDQTGVGTLVVRRG 60
Query 61 HPPDPASVLGPDRLPGVRLWLYTNFHCNLCCDYCCVSSSPSTPHRELGAERIGRIVGEAA 120
HPPDPASVLGPDRLPGVRLWLYTNFHCNLCCDYCCVSSSPSTPHRELGAERIGRIVGEAA
Sbjct 61 HPPDPASVLGPDRLPGVRLWLYTNFHCNLCCDYCCVSSSPSTPHRELGAERIGRIVGEAA 120
Query 121 RWGVRELFLTGGEPFLLPDIDTIIATCVKQLPTTVLTNGMVFKGRGRRALESLPRGLALQ 180
RWGVRELFLTGGEPFLLPDIDTIIATCVKQLPTTVLTNGMVFKGRGRRALESLPRGLALQ
Sbjct 121 RWGVRELFLTGGEPFLLPDIDTIIATCVKQLPTTVLTNGMVFKGRGRRALESLPRGLALQ 180
Query 181 ISLDSATPELHDAHRGAGTWVKAVAGIRLALSLGFRVRVAATVASPAPGELTAFHDFLDG 240
ISLDSATPELHDAHRGAGTWVKAVAGIRLALSLGFRVRVAATVASPAPGELTAFHDFLDG
Sbjct 181 ISLDSATPELHDAHRGAGTWVKAVAGIRLALSLGFRVRVAATVASPAPGELTAFHDFLDG 240
Query 241 LGIAPGDQLVRPIALEGAASQGVALTRESLVPEVTVTADGVYWHPVAATDERALVTRTVE 300
LGIAPGDQLVRPIALEGAASQGVALTRESLVPEVTVTADGVYWHPVAATDERALVTRTVE
Sbjct 241 LGIAPGDQLVRPIALEGAASQGVALTRESLVPEVTVTADGVYWHPVAATDERALVTRTVE 300
Query 301 PLTPALDMVSRLFAEQWTRAAEEAALFPCA 330
PLTPALDMVSRLFAEQWTRAAEEAALFPCA
Sbjct 301 PLTPALDMVSRLFAEQWTRAAEEAALFPCA 330
>gi|294996631|ref|ZP_06802322.1| molybdopterin biosynthesis protein moeX [Mycobacterium tuberculosis
210]
gi|339294637|gb|AEJ46748.1| molybdopterin biosynthesis protein moeX [Mycobacterium tuberculosis
CCDC5079]
gi|339298270|gb|AEJ50380.1| molybdopterin biosynthesis protein moeX [Mycobacterium tuberculosis
CCDC5180]
Length=331
Score = 658 bits (1698), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/330 (99%), Positives = 329/330 (99%), Gaps = 0/330 (0%)
Query 1 VIIELMRRVVGLAQGATAEVAVYGDRDRDLAERWCANTGNTLVRADVDQTGVGTLVVRRG 60
VIIELMRRVVGLAQGATAEVAVYGDRDRDLAERWCANTGNTLVRADVDQTGVGTLVVRRG
Sbjct 2 VIIELMRRVVGLAQGATAEVAVYGDRDRDLAERWCANTGNTLVRADVDQTGVGTLVVRRG 61
Query 61 HPPDPASVLGPDRLPGVRLWLYTNFHCNLCCDYCCVSSSPSTPHRELGAERIGRIVGEAA 120
HPPDPASVLGPDRLPGVRLWLYTNFHCNLCCDYCCVSSSPSTPHRELGAERIGRIVGEAA
Sbjct 62 HPPDPASVLGPDRLPGVRLWLYTNFHCNLCCDYCCVSSSPSTPHRELGAERIGRIVGEAA 121
Query 121 RWGVRELFLTGGEPFLLPDIDTIIATCVKQLPTTVLTNGMVFKGRGRRALESLPRGLALQ 180
RWGVRELFLTGGEPFLLPDIDTIIATCVKQLPTTVLTNGMVFKGRGRRALESLPRGLALQ
Sbjct 122 RWGVRELFLTGGEPFLLPDIDTIIATCVKQLPTTVLTNGMVFKGRGRRALESLPRGLALQ 181
Query 181 ISLDSATPELHDAHRGAGTWVKAVAGIRLALSLGFRVRVAATVASPAPGELTAFHDFLDG 240
ISLDSATPELHDAHRGAGTWVKAVAGIRLALSLGFRVRVAATVASPAPGELTAFHDFLDG
Sbjct 182 ISLDSATPELHDAHRGAGTWVKAVAGIRLALSLGFRVRVAATVASPAPGELTAFHDFLDG 241
Query 241 LGIAPGDQLVRPIALEGAASQGVALTRESLVPEVTVTADGVYWHPVAATDERALVTRTVE 300
LGIAPGDQLVRPIALEGAASQGVALTRESLVPEVTV ADGVYWHPVAATDERALVTRTVE
Sbjct 242 LGIAPGDQLVRPIALEGAASQGVALTRESLVPEVTVAADGVYWHPVAATDERALVTRTVE 301
Query 301 PLTPALDMVSRLFAEQWTRAAEEAALFPCA 330
PLTPALDMVSRLFAEQWTRAAEEAALFPCA
Sbjct 302 PLTPALDMVSRLFAEQWTRAAEEAALFPCA 331
>gi|289757792|ref|ZP_06517170.1| molybdopterin biosynthesis protein MoeX [Mycobacterium tuberculosis
T85]
gi|289713356|gb|EFD77368.1| molybdopterin biosynthesis protein MoeX [Mycobacterium tuberculosis
T85]
gi|326903295|gb|EGE50228.1| molybdopterin biosynthesis protein moeX [Mycobacterium tuberculosis
W-148]
Length=330
Score = 657 bits (1695), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/330 (99%), Positives = 329/330 (99%), Gaps = 0/330 (0%)
Query 1 VIIELMRRVVGLAQGATAEVAVYGDRDRDLAERWCANTGNTLVRADVDQTGVGTLVVRRG 60
+IIELMRRVVGLAQGATAEVAVYGDRDRDLAERWCANTGNTLVRADVDQTGVGTLVVRRG
Sbjct 1 MIIELMRRVVGLAQGATAEVAVYGDRDRDLAERWCANTGNTLVRADVDQTGVGTLVVRRG 60
Query 61 HPPDPASVLGPDRLPGVRLWLYTNFHCNLCCDYCCVSSSPSTPHRELGAERIGRIVGEAA 120
HPPDPASVLGPDRLPGVRLWLYTNFHCNLCCDYCCVSSSPSTPHRELGAERIGRIVGEAA
Sbjct 61 HPPDPASVLGPDRLPGVRLWLYTNFHCNLCCDYCCVSSSPSTPHRELGAERIGRIVGEAA 120
Query 121 RWGVRELFLTGGEPFLLPDIDTIIATCVKQLPTTVLTNGMVFKGRGRRALESLPRGLALQ 180
RWGVRELFLTGGEPFLLPDIDTIIATCVKQLPTTVLTNGMVFKGRGRRALESLPRGLALQ
Sbjct 121 RWGVRELFLTGGEPFLLPDIDTIIATCVKQLPTTVLTNGMVFKGRGRRALESLPRGLALQ 180
Query 181 ISLDSATPELHDAHRGAGTWVKAVAGIRLALSLGFRVRVAATVASPAPGELTAFHDFLDG 240
ISLDSATPELHDAHRGAGTWVKAVAGIRLALSLGFRVRVAATVASPAPGELTAFHDFLDG
Sbjct 181 ISLDSATPELHDAHRGAGTWVKAVAGIRLALSLGFRVRVAATVASPAPGELTAFHDFLDG 240
Query 241 LGIAPGDQLVRPIALEGAASQGVALTRESLVPEVTVTADGVYWHPVAATDERALVTRTVE 300
LGIAPGDQLVRPIALEGAASQGVALTRESLVPEVTV ADGVYWHPVAATDERALVTRTVE
Sbjct 241 LGIAPGDQLVRPIALEGAASQGVALTRESLVPEVTVAADGVYWHPVAATDERALVTRTVE 300
Query 301 PLTPALDMVSRLFAEQWTRAAEEAALFPCA 330
PLTPALDMVSRLFAEQWTRAAEEAALFPCA
Sbjct 301 PLTPALDMVSRLFAEQWTRAAEEAALFPCA 330
>gi|308375648|ref|ZP_07444630.2| molybdopterin biosynthesis protein moeX [Mycobacterium tuberculosis
SUMu007]
gi|308345582|gb|EFP34433.1| molybdopterin biosynthesis protein moeX [Mycobacterium tuberculosis
SUMu007]
Length=326
Score = 652 bits (1682), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/326 (99%), Positives = 326/326 (100%), Gaps = 0/326 (0%)
Query 5 LMRRVVGLAQGATAEVAVYGDRDRDLAERWCANTGNTLVRADVDQTGVGTLVVRRGHPPD 64
+MRRVVGLAQGATAEVAVYGDRDRDLAERWCANTGNTLVRADVDQTGVGTLVVRRGHPPD
Sbjct 1 MMRRVVGLAQGATAEVAVYGDRDRDLAERWCANTGNTLVRADVDQTGVGTLVVRRGHPPD 60
Query 65 PASVLGPDRLPGVRLWLYTNFHCNLCCDYCCVSSSPSTPHRELGAERIGRIVGEAARWGV 124
PASVLGPDRLPGVRLWLYTNFHCNLCCDYCCVSSSPSTPHRELGAERIGRIVGEAARWGV
Sbjct 61 PASVLGPDRLPGVRLWLYTNFHCNLCCDYCCVSSSPSTPHRELGAERIGRIVGEAARWGV 120
Query 125 RELFLTGGEPFLLPDIDTIIATCVKQLPTTVLTNGMVFKGRGRRALESLPRGLALQISLD 184
RELFLTGGEPFLLPDIDTIIATCVKQLPTTVLTNGMVFKGRGRRALESLPRGLALQISLD
Sbjct 121 RELFLTGGEPFLLPDIDTIIATCVKQLPTTVLTNGMVFKGRGRRALESLPRGLALQISLD 180
Query 185 SATPELHDAHRGAGTWVKAVAGIRLALSLGFRVRVAATVASPAPGELTAFHDFLDGLGIA 244
SATPELHDAHRGAGTWVKAVAGIRLALSLGFRVRVAATVASPAPGELTAFHDFLDGLGIA
Sbjct 181 SATPELHDAHRGAGTWVKAVAGIRLALSLGFRVRVAATVASPAPGELTAFHDFLDGLGIA 240
Query 245 PGDQLVRPIALEGAASQGVALTRESLVPEVTVTADGVYWHPVAATDERALVTRTVEPLTP 304
PGDQLVRPIALEGAASQGVALTRESLVPEVTVTADGVYWHPVAATDERALVTRTVEPLTP
Sbjct 241 PGDQLVRPIALEGAASQGVALTRESLVPEVTVTADGVYWHPVAATDERALVTRTVEPLTP 300
Query 305 ALDMVSRLFAEQWTRAAEEAALFPCA 330
ALDMVSRLFAEQWTRAAEEAALFPCA
Sbjct 301 ALDMVSRLFAEQWTRAAEEAALFPCA 326
>gi|308380147|ref|ZP_07488858.2| molybdopterin biosynthesis protein moeX [Mycobacterium tuberculosis
SUMu011]
gi|308362436|gb|EFP51287.1| molybdopterin biosynthesis protein moeX [Mycobacterium tuberculosis
SUMu011]
Length=325
Score = 650 bits (1678), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/325 (100%), Positives = 325/325 (100%), Gaps = 0/325 (0%)
Query 6 MRRVVGLAQGATAEVAVYGDRDRDLAERWCANTGNTLVRADVDQTGVGTLVVRRGHPPDP 65
MRRVVGLAQGATAEVAVYGDRDRDLAERWCANTGNTLVRADVDQTGVGTLVVRRGHPPDP
Sbjct 1 MRRVVGLAQGATAEVAVYGDRDRDLAERWCANTGNTLVRADVDQTGVGTLVVRRGHPPDP 60
Query 66 ASVLGPDRLPGVRLWLYTNFHCNLCCDYCCVSSSPSTPHRELGAERIGRIVGEAARWGVR 125
ASVLGPDRLPGVRLWLYTNFHCNLCCDYCCVSSSPSTPHRELGAERIGRIVGEAARWGVR
Sbjct 61 ASVLGPDRLPGVRLWLYTNFHCNLCCDYCCVSSSPSTPHRELGAERIGRIVGEAARWGVR 120
Query 126 ELFLTGGEPFLLPDIDTIIATCVKQLPTTVLTNGMVFKGRGRRALESLPRGLALQISLDS 185
ELFLTGGEPFLLPDIDTIIATCVKQLPTTVLTNGMVFKGRGRRALESLPRGLALQISLDS
Sbjct 121 ELFLTGGEPFLLPDIDTIIATCVKQLPTTVLTNGMVFKGRGRRALESLPRGLALQISLDS 180
Query 186 ATPELHDAHRGAGTWVKAVAGIRLALSLGFRVRVAATVASPAPGELTAFHDFLDGLGIAP 245
ATPELHDAHRGAGTWVKAVAGIRLALSLGFRVRVAATVASPAPGELTAFHDFLDGLGIAP
Sbjct 181 ATPELHDAHRGAGTWVKAVAGIRLALSLGFRVRVAATVASPAPGELTAFHDFLDGLGIAP 240
Query 246 GDQLVRPIALEGAASQGVALTRESLVPEVTVTADGVYWHPVAATDERALVTRTVEPLTPA 305
GDQLVRPIALEGAASQGVALTRESLVPEVTVTADGVYWHPVAATDERALVTRTVEPLTPA
Sbjct 241 GDQLVRPIALEGAASQGVALTRESLVPEVTVTADGVYWHPVAATDERALVTRTVEPLTPA 300
Query 306 LDMVSRLFAEQWTRAAEEAALFPCA 330
LDMVSRLFAEQWTRAAEEAALFPCA
Sbjct 301 LDMVSRLFAEQWTRAAEEAALFPCA 325
>gi|240171258|ref|ZP_04749917.1| MoaA-related protein [Mycobacterium kansasii ATCC 12478]
Length=331
Score = 504 bits (1297), Expect = 9e-141, Method: Compositional matrix adjust.
Identities = 272/331 (83%), Positives = 295/331 (90%), Gaps = 1/331 (0%)
Query 1 VIIELMRRVVGLAQGATAEVAVYGDRDRDLAERWCANTGNTLVRADVDQTGVGTLVVRRG 60
+I++LMR+V GLAQGAT EVAV DR+LAE+WCA TGNTLV D+D GVG +VVRRG
Sbjct 1 MILDLMRQVGGLAQGATVEVAVSSHHDRELAEKWCARTGNTLVSTDLDDAGVGAVVVRRG 60
Query 61 HPPDPASVLGPDRLPGVRLWLYTNFHCNLCCDYCCVSSSPSTPHRELGAERIGRIVGEAA 120
HPPDPA VLG DRLPGVRLWLYTNFHCNL CDYCCVSSSP HRELG+ERIGRIVGEAA
Sbjct 61 HPPDPAEVLGADRLPGVRLWLYTNFHCNLSCDYCCVSSSPQAAHRELGSERIGRIVGEAA 120
Query 121 RWGVRELFLTGGEPFLLPDIDTIIATCVKQLPTTVLTNGMVFKGRGRRALESLPR-GLAL 179
RWGVRELFLTGGEPFLLPDI TII+ CV+ LPTTVLTNGMVFKGR RRAL+SLPR GLAL
Sbjct 121 RWGVRELFLTGGEPFLLPDIATIISACVETLPTTVLTNGMVFKGRARRALDSLPRDGLAL 180
Query 180 QISLDSATPELHDAHRGAGTWVKAVAGIRLALSLGFRVRVAATVASPAPGELTAFHDFLD 239
QISLDSATP+LHD+HRGAGTW KAVAGIR ALSLGFRVRVAATVA+PAPGEL AFH+FLD
Sbjct 181 QISLDSATPDLHDSHRGAGTWEKAVAGIRFALSLGFRVRVAATVAAPAPGELAAFHEFLD 240
Query 240 GLGIAPGDQLVRPIALEGAASQGVALTRESLVPEVTVTADGVYWHPVAATDERALVTRTV 299
LGIA DQLVRPIALEG AS+G++L RESLVPEVTVTA+GVYWHPVAATDERALV+R +
Sbjct 241 ALGIAGEDQLVRPIALEGVASEGLSLRRESLVPEVTVTAEGVYWHPVAATDERALVSRII 300
Query 300 EPLTPALDMVSRLFAEQWTRAAEEAALFPCA 330
EPLTPALD VSRLF EQW +AAE AALFPCA
Sbjct 301 EPLTPALDAVSRLFTEQWAQAAEAAALFPCA 331
>gi|120406825|ref|YP_956654.1| radical SAM domain-containing protein [Mycobacterium vanbaalenii
PYR-1]
gi|119959643|gb|ABM16648.1| Radical SAM domain protein [Mycobacterium vanbaalenii PYR-1]
Length=332
Score = 465 bits (1196), Expect = 5e-129, Method: Compositional matrix adjust.
Identities = 225/331 (68%), Positives = 265/331 (81%), Gaps = 1/331 (0%)
Query 1 VIIELMRRVVGLAQGATAEVAVYGDRDRDLAERWCANTGNTLVRADVDQTGVGTLVVRRG 60
VI++LMR + LA GA E+AV +R+ AE+WCA +GNT+V+AD+D+TG GTL VRRG
Sbjct 2 VILDLMRLMATLADGAVGEIAVASVAERETAEKWCARSGNTVVQADLDETGAGTLTVRRG 61
Query 61 HPPDPASVLGPDRLPGVRLWLYTNFHCNLCCDYCCVSSSPSTPHRELGAERIGRIVGEAA 120
PPDP VLGP+R+PG RLW+YTNFHCNL CDYCCV SSP P RELGA+RI R+ EAA
Sbjct 62 RPPDPLLVLGPERMPGARLWMYTNFHCNLACDYCCVESSPQAPRRELGADRIARLAREAA 121
Query 121 RWGVRELFLTGGEPFLLPDIDTIIATCVKQLPTTVLTNGMVFKGRGRRALESLPR-GLAL 179
WGVRE+FLTGGEPFLL DI TI+ +C LPTTVLTNGMVF+GRG R L+++PR +AL
Sbjct 122 DWGVREVFLTGGEPFLLSDIGTIVRSCAALLPTTVLTNGMVFRGRGLRELDAIPRDNVAL 181
Query 180 QISLDSATPELHDAHRGAGTWVKAVAGIRLALSLGFRVRVAATVASPAPGELTAFHDFLD 239
QISLDSAT ELHD+HRG G+W +AV GIR+A LGFRVRVAATVA+P PGEL AFHDFLD
Sbjct 182 QISLDSATSELHDSHRGHGSWARAVEGIRVARGLGFRVRVAATVAAPVPGELKAFHDFLD 241
Query 240 GLGIAPGDQLVRPIALEGAASQGVALTRESLVPEVTVTADGVYWHPVAATDERALVTRTV 299
LGIA DQ+VRP+A EG+A+ GV +TR SLVPEV VTA+GVYWHPVAA D+ ALVTR +
Sbjct 242 ELGIAQDDQVVRPVAREGSAADGVQITRASLVPEVAVTAEGVYWHPVAAIDDDALVTRQI 301
Query 300 EPLTPALDMVSRLFAEQWTRAAEEAALFPCA 330
EPL PALD ++ FAE W R A A LFPCA
Sbjct 302 EPLAPALDEIAHAFAELWARKANAAQLFPCA 332
>gi|88856676|ref|ZP_01131332.1| MoaA-related protein [marine actinobacterium PHSC20C1]
gi|88814137|gb|EAR24003.1| MoaA-related protein [marine actinobacterium PHSC20C1]
Length=336
Score = 330 bits (846), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 171/337 (51%), Positives = 219/337 (65%), Gaps = 13/337 (3%)
Query 1 VIIELMRRVVGLAQGATAEVAVYGDRDRDLAER------WCANTGNTLVRADVDQTGVGT 54
++++L+ R + GAT VA+ G+ + DL WC TGN LV A +
Sbjct 6 LVLDLVERAKTVPTGATFTVALSGN-EADLTAATATITGWCERTGNELVSATAHEA---- 60
Query 55 LVVRRGHPPDPASVLGPDRLPGVRLWLYTNFHCNLCCDYCCVSSSPSTPHRELGAERIGR 114
VR G PDP + + PD+LPG RLW+YTNF CNL CDYCCV SSP T R LG +R+ +
Sbjct 61 -TVRHGRAPDPLAGIDPDQLPGTRLWMYTNFDCNLACDYCCVRSSPQTERRALGVDRVAQ 119
Query 115 IVGEAARWGVRELFLTGGEPFLLPDIDTIIATCVKQLPTTVLTNGMVFKGRGRRALESL- 173
+ EA GV+EL LTGGEPFLLPDID ++A C LPTT+LTNGM+F+G L ++
Sbjct 120 LAAEAVEAGVKELILTGGEPFLLPDIDEVVAACATHLPTTLLTNGMLFQGHRLERLRAMD 179
Query 174 PRGLALQISLDSATPELHDAHRGAGTWVKAVAGIRLALSLGFRVRVAATVASPAPGELTA 233
P + LQISLDS TPE+HD+HRG +W +AV GIR+A GFRV+VAAT+ + EL
Sbjct 180 PERVTLQISLDSGTPEVHDSHRGKRSWQRAVNGIRIAHEEGFRVKVAATLPAEQIHELEP 239
Query 234 FHDFLDGLGIAPGDQLVRPIALEGAASQGVALTRESLVPEVTVTADGVYWHPVAATDERA 293
FH FLD +GIA DQ++R +A G + G+ LT E+L+PEVT+TA+GVYWHPVAA +
Sbjct 240 FHVFLDSIGIAREDQVIRALAHRGVSESGLELTVETLIPEVTITAEGVYWHPVAADHDDQ 299
Query 294 LVTRTVEPLTPALDMVSRLFAEQWTRAAEEAALFPCA 330
LVTR + PL A+D V F E RA AA FPCA
Sbjct 300 LVTRQIFPLKNAIDQVRAEFIEYRMRADAAAAWFPCA 336
>gi|289761836|ref|ZP_06521214.1| MoaA-related protein [Mycobacterium tuberculosis GM 1503]
gi|289709342|gb|EFD73358.1| MoaA-related protein [Mycobacterium tuberculosis GM 1503]
Length=152
Score = 297 bits (761), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 151/152 (99%), Positives = 152/152 (100%), Gaps = 0/152 (0%)
Query 179 LQISLDSATPELHDAHRGAGTWVKAVAGIRLALSLGFRVRVAATVASPAPGELTAFHDFL 238
+QISLDSATPELHDAHRGAGTWVKAVAGIRLALSLGFRVRVAATVASPAPGELTAFHDFL
Sbjct 1 MQISLDSATPELHDAHRGAGTWVKAVAGIRLALSLGFRVRVAATVASPAPGELTAFHDFL 60
Query 239 DGLGIAPGDQLVRPIALEGAASQGVALTRESLVPEVTVTADGVYWHPVAATDERALVTRT 298
DGLGIAPGDQLVRPIALEGAASQGVALTRESLVPEVTVTADGVYWHPVAATDERALVTRT
Sbjct 61 DGLGIAPGDQLVRPIALEGAASQGVALTRESLVPEVTVTADGVYWHPVAATDERALVTRT 120
Query 299 VEPLTPALDMVSRLFAEQWTRAAEEAALFPCA 330
VEPLTPALDMVSRLFAEQWTRAAEEAALFPCA
Sbjct 121 VEPLTPALDMVSRLFAEQWTRAAEEAALFPCA 152
>gi|309791200|ref|ZP_07685732.1| MoaA-related protein [Oscillochloris trichoides DG6]
gi|308226762|gb|EFO80458.1| MoaA-related protein [Oscillochloris trichoides DG6]
Length=261
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 102/235 (44%), Positives = 140/235 (60%), Gaps = 2/235 (0%)
Query 78 RLWLYTNFHCNLCCDYCCVSSSPSTPHRELGAERIGRIVGEAARWGVRELFLTGGEPFLL 137
+LW+YTN+ CNL C YC SSP P R +G E + R+V EA G +LFLTGGEP +L
Sbjct 11 KLWIYTNYDCNLRCSYCLARSSPEVPRRAIGLENVQRLVDEAVALGFSDLFLTGGEPTIL 70
Query 138 PDIDTIIATCVKQLPTTVLTNGMVFKGR-GRRALESLPRGLALQISLDSATPELHDAHRG 196
+I +IA ++ TT+LTN M+ +GR R +E L +Q+SLD A HDA+RG
Sbjct 71 DEIYAMIAYATPRIRTTLLTNAMLLRGRRMERLVECASPNLTVQVSLDGACAADHDAYRG 130
Query 197 AGTWVKAVAGIRLALSLGFRVRVAATVASPAPGELTAFHDFLDGLGIAPGDQLVRPIALE 256
GTW K VAGI L GF VR++ T L F + LGI D VRP+A
Sbjct 131 VGTWAKTVAGIEALLERGFHVRLSTTETPANTARLAEICTFHEQLGIPESDHFVRPMARR 190
Query 257 GAASQGVALTRESLVPEVTVTADGVYWHPVAATDERALVTRTVEPLTPALDMVSR 311
G A GV + +L PE+TV DG++WHP+ +TD+ LV++++ PL A++ V +
Sbjct 191 GFAETGVEVNMLNLAPELTVDVDGIFWHPL-STDKDMLVSKSIFPLACAVEQVKQ 244
>gi|89091892|ref|ZP_01164847.1| radical SAM domain protein [Oceanospirillum sp. MED92]
gi|89083627|gb|EAR62844.1| radical SAM domain protein [Oceanospirillum sp. MED92]
Length=303
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/147 (35%), Positives = 75/147 (52%), Gaps = 4/147 (2%)
Query 78 RLWLYTNFHCNLCCDYCCVSSSPSTPHREL-GAERIGRIVGEAARWGVRELFLTGGEPFL 136
LW +T CNL C +C S P EL + + + EA GV + TGGEPFL
Sbjct 28 ELWFHTGTACNLQCPFCLEGSGPGDNRLELVKFDDVKPYIDEALELGVEQFSFTGGEPFL 87
Query 137 LPDIDTIIATCVKQLPTTVLTNGMVFKGRGRRALESL---PRGLALQISLDSATPELHDA 193
+ I+A + P VLTNG + ++SL P ++ ++S+D + E HDA
Sbjct 88 AKQLVKILAYAAQYKPCMVLTNGTEALQQRMEEVKSLLECPNQISFRVSIDKPSAEAHDA 147
Query 194 HRGAGTWVKAVAGIRLALSLGFRVRVA 220
RG G ++KA+ G+++ GF V VA
Sbjct 148 GRGEGNFLKALTGLKMLYDAGFNVSVA 174
>gi|283781822|ref|YP_003372577.1| radical SAM domain-containing protein [Pirellula staleyi DSM
6068]
gi|283440275|gb|ADB18717.1| Radical SAM domain protein [Pirellula staleyi DSM 6068]
Length=309
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/144 (37%), Positives = 81/144 (57%), Gaps = 6/144 (4%)
Query 78 RLWLY-TNFHCNLCCDYCCVSSSPSTPHRE-LGAERIGRIVGEAARWGVRELFLTGGEPF 135
+LW + CNL C +C VSSSP+ E L ++I + E+ GV+E + TGGEPF
Sbjct 23 QLWFQVSGLLCNLACHHCFVSSSPTNRSLEMLSFDQIKTRLEESIPLGVKEYYFTGGEPF 82
Query 136 LLPDIDTIIATCVKQLPTTVLTNGMVFKGRGRRALESLP----RGLALQISLDSATPELH 191
L P + I+ ++ PTTVLTNG V K L ++ L ++S+D + ++
Sbjct 83 LHPQMTEILELSLQYGPTTVLTNGTVLKDSWLARLAAVQAASIYSLEFRLSIDGPSAAIN 142
Query 192 DAHRGAGTWVKAVAGIRLALSLGF 215
D RG+GT+ +A+AG++ + GF
Sbjct 143 DPVRGSGTFARAMAGVKKLCAHGF 166
>gi|87309369|ref|ZP_01091505.1| radical SAM domain protein [Blastopirellula marina DSM 3645]
gi|87288008|gb|EAQ79906.1| radical SAM domain protein [Blastopirellula marina DSM 3645]
Length=298
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/159 (39%), Positives = 82/159 (52%), Gaps = 9/159 (5%)
Query 65 PASVLGPDRLPGV--RLWLY-TNFHCNLCCDYCCVSSSP-STPHRELGAERIGRIVGEAA 120
PA VL P +P LW T CNL C +C VS P + L + + EAA
Sbjct 2 PAGVL-PQVVPSHLDALWFQVTGLRCNLACHHCFVSCHPKNNTFGFLSLADVESRLEEAA 60
Query 121 RWGVRELFLTGGEPFLLPDIDTIIATCVKQLPTTVLTNGMVFKG----RGRRALESLPRG 176
GV+E + TGGEPFL P I I+ + P TVLTNG V K + R A E
Sbjct 61 ALGVKEFYFTGGEPFLHPQIVPILIAALAYGPVTVLTNGTVLKADWLQQLRDAEEQGIYS 120
Query 177 LALQISLDSATPELHDAHRGAGTWVKAVAGIRLALSLGF 215
L ++S+D +PE +D RG GT+V+A+ G++L + F
Sbjct 121 LEFRVSIDGFSPETNDPIRGEGTFVRAMRGVQLLVEHHF 159
>gi|149186397|ref|ZP_01864710.1| radical SAM domain protein [Erythrobacter sp. SD-21]
gi|148829986|gb|EDL48424.1| radical SAM domain protein [Erythrobacter sp. SD-21]
Length=329
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/161 (36%), Positives = 80/161 (50%), Gaps = 7/161 (4%)
Query 79 LWLYTNFHCNLCCDYCCVSSSPSTPHR-ELGAERIGRIVGEAARWGVRELFLTGGEPFLL 137
LWL T CNL C C + SSP+ L A+ R + EA RE+ TGGEPF+
Sbjct 53 LWLNTGTLCNLACATCYIESSPTNDALIYLSADHAARFLAEAKGLDTREIGFTGGEPFMN 112
Query 138 PDIDTIIATCVKQ-LPTTVLTNGMVFKGRGRRALESLPRG----LALQISLDSATPELHD 192
P++ ++ ++Q VLTN M R L +L L L++SLD + E+H+
Sbjct 113 PEMLPMLTATLEQGFEALVLTNAMKPMRRHEEVLLALREQHGDRLTLRVSLDHHSREVHE 172
Query 193 AHRGAGTWVKAVAGIRLALSLGFRVRVAATVASPAPGELTA 233
RG +W A+AG+R GF + VA + P GE A
Sbjct 173 GERGPRSWAPAIAGLRWLSDHGFSIAVAGRLL-PGEGEAQA 212
>gi|298373887|ref|ZP_06983845.1| radical SAM domain-containing protein [Bacteroides sp. 3_1_19]
gi|298268255|gb|EFI09910.1| radical SAM domain-containing protein [Bacteroides sp. 3_1_19]
Length=440
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/117 (42%), Positives = 62/117 (53%), Gaps = 5/117 (4%)
Query 86 HCNLCCDYCCVSSSPSTPHRELGAERIGRIVGEAARWGVRELFLTGGEPFLLPDIDTIIA 145
HCNL C +C +SP RE G + RI E R ++ L +TGGEPF +P+ D I+
Sbjct 119 HCNLACKHCFEGASPKFGIREYGIDVFSRIFSEFDRINLKTLKITGGEPFTVPNFDQILL 178
Query 146 TCVK-QLPTTVLTNGMVFKGRGRRALESLPRG-LALQISLDSATPELHDAHRGAGTW 200
K T VLTNGM+ K R +E L G + L ISLD E HD RG G +
Sbjct 179 ELSKRHFETIVLTNGMLIKDRD---IEILRLGDIHLGISLDGLDSETHDFTRGKGAF 232
>gi|339007172|ref|ZP_08639747.1| radical SAM domain protein [Brevibacillus laterosporus LMG 15441]
gi|338776381|gb|EGP35909.1| radical SAM domain protein [Brevibacillus laterosporus LMG 15441]
Length=431
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/293 (25%), Positives = 114/293 (39%), Gaps = 45/293 (15%)
Query 47 VDQTGVGTLVVRRGHPPDPASVLGPDRLPGVRLWLYTNFHCNLCCDYCCVSSSPS-TPHR 105
+D V T + H P P SV + T + CNL C YC SSP+ +
Sbjct 78 IDSFKVDTENKQSMHKPVPKSV-----------YFVTTYKCNLNCVYCYAESSPNRSMDN 126
Query 106 ELGAERIGRIVGEAARWGVRELFLTGGEPFLLPDIDTIIATCVKQ-LPTTVLTNGMVFKG 164
++ E R++ E G + + TGGE FL D+ ++ L +++NG F
Sbjct 127 DISTEEAKRVITEVKELGTKTIVFTGGEAFLRKDLVELMEYSDSLGLHVHMISNGS-FIS 185
Query 165 RGRRALESLPRGLALQISLDSATPELHDAHRGAGTWVKAVAGIRLALSLGFRVRVAATVA 224
A + + ISLDS + HD +RG G+W KA I L L G ++++ T+
Sbjct 186 NKEIANKIAEITKLVTISLDSMIEDEHDKNRGKGSWQKAKKAIDLLLEAGCKLKINQTI- 244
Query 225 SPAPGELTAFHDFLDGLGIAPGDQLVRPIALEGAASQGVALTRESLVPEVTVTADGVYWH 284
+ A D +D ++ P+ AS G T E + V
Sbjct 245 --TKNNMDAVEDVIDYTNKNNIRLIIAPV-----ASLGRGKTHEHELNYV---------- 287
Query 285 PVAATDERALVTRTVEPLTPALDMVSRLFAEQWTRAA-------EEAALFPCA 330
+R + T+ P D V++ + + A + +FPC
Sbjct 288 ------QRIKIENTIINKQPNFDAVNQFYIKNHCGHAYSEFSVDSKGDVFPCK 334
>gi|94270164|ref|ZP_01291666.1| UbiE/COQ5 methyltransferase:Radical SAM [delta proteobacterium
MLMS-1]
gi|93450918|gb|EAT01921.1| UbiE/COQ5 methyltransferase:Radical SAM [delta proteobacterium
MLMS-1]
Length=1079
Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/168 (34%), Positives = 79/168 (48%), Gaps = 5/168 (2%)
Query 80 WLYTNFHCNLCCDYCCVSSSPSTPHRELGAERIGRIVGEAARWGVRELFLTGGEPFLLPD 139
W + +CNL C +C +S P L AE + + + +A G R + TGGEPF PD
Sbjct 106 WFHVTNNCNLACRHCLFASRPGRAAESLPAELLSQGLAQARGLGCRLFYFTGGEPFTYPD 165
Query 140 IDTIIATCVK--QLPTTVLTNGMVFKGRGRRALESLPRG-LALQISLDSATPELHDAHRG 196
I+A + VLTNG++ L+ LP G L LQ+SLD E HD RG
Sbjct 166 FTAILADLLAAPDHHAVVLTNGLLLADH-LAELQQLPAGRLHLQLSLDGLEEE-HDQLRG 223
Query 197 AGTWVKAVAGIRLALSLGFRVRVAATVASPAPGELTAFHDFLDGLGIA 244
G++ + V ++L G +A V +L A DF G+A
Sbjct 224 RGSFARLVEALQLLRRRGLAATLAVAVNRTNVEQLPAMVDFAADQGVA 271
>gi|294778157|ref|ZP_06743588.1| radical SAM domain protein [Bacteroides vulgatus PC510]
gi|294448016|gb|EFG16585.1| radical SAM domain protein [Bacteroides vulgatus PC510]
Length=433
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/218 (26%), Positives = 102/218 (47%), Gaps = 8/218 (3%)
Query 86 HCNLCCDYCCVSSSPSTPHRELGAERIGRIVGEAARWGVRELFLTGGEPFLLPDIDTIIA 145
HCNL C +C SSPS + + + RI+ + ++ L +TGGEPF PDID +
Sbjct 117 HCNLACKHCFEGSSPSFEVKRISSSDTDRILSQFEAANIQTLKITGGEPFSHPDIDNFLF 176
Query 146 TCVK-QLPTTVLTNGMVFKGRGRRALESLPRG-LALQISLDSATPELHDAHRGAGTWVKA 203
++ T +LTN ++ ++ ++ + +G + L ISLD T + HD RG G + K
Sbjct 177 KAIQCHFETIILTNALLL---NKQRIDMIKKGHIQLGISLDGMTSDTHDFIRGKGAFDKL 233
Query 204 VAGIRLALSLGFRVRVAATVASPAPGELTAFHDF-LDGLGIAP-GDQLVRPIALEGAASQ 261
+ +++ + + T+ ++ D+ L+ LG +RP+ +
Sbjct 234 IRILKILSLEDIKFSITCTINKKNLCQIDEIIDYSLNELGAQTLFLNRLRPMGRMNQNTN 293
Query 262 GVALTRES-LVPEVTVTADGVYWHPVAATDERALVTRT 298
V +E+ V ++ + G Y + D+ AL + +
Sbjct 294 IVLSEQENDNVYKLYLNQKGKYNKRIILADDSALKSNS 331
>gi|311696741|gb|ADP99614.1| radical SAM domain protein [Marinobacter adhaerens HP15]
Length=323
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/188 (32%), Positives = 86/188 (46%), Gaps = 12/188 (6%)
Query 64 DPASVLGPDRLPGVRLWLYTNFHCNLCCDYCCVSSSPST---PHRELGAERIGRIVGEAA 120
DP + D+L LW++T CNL C +C S P P +L + + EA
Sbjct 35 DPRGYIDADKLK--ELWIHTGTACNLACPFCLEGSHPGDGRIPGMKLSD--VKPFIHEAI 90
Query 121 RWGVRELFLTGGEPFLLPDIDTIIATCVKQLPTTVLTNGMV-FKGRGRRALESL--PRGL 177
GV + TGGEPF++ D I+ + P VLTN R + L L P +
Sbjct 91 DMGVEQFSFTGGEPFVIRDFVNILNYASQHRPCFVLTNATEPLHKRQHQVLPLLDNPYPI 150
Query 178 ALQISLDSATPELHDAHRGAGTWVKAVAGIRLALSLGFRVRVA-ATVASPAPGELT-AFH 235
++SLD HD RG G++ +A+ GIR + GF+V +A T P ++ AF
Sbjct 151 HFRVSLDFPDRARHDKDRGDGSFDEALQGIRWLVDQGFKVSIARQTDPEEIPADVQAAFR 210
Query 236 DFLDGLGI 243
D GI
Sbjct 211 DIFREWGI 218
>gi|149377557|ref|ZP_01895297.1| radical SAM domain protein [Marinobacter algicola DG893]
gi|149358170|gb|EDM46652.1| radical SAM domain protein [Marinobacter algicola DG893]
Length=320
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/188 (32%), Positives = 87/188 (47%), Gaps = 12/188 (6%)
Query 64 DPASVLGPDRLPGVRLWLYTNFHCNLCCDYCCVSSSPST---PHRELGAERIGRIVGEAA 120
DP + D+L LW++T CNL C +C S P P +L + + EA
Sbjct 32 DPRGYIDSDKLK--ELWIHTGTACNLACPFCLEGSHPGDGRIPGMKLSD--VKPFIHEAL 87
Query 121 RWGVRELFLTGGEPFLLPDIDTIIATCVKQLPTTVLTNGMVFKGRGRRALESLPRG---L 177
GV + TGGEPF++ D I+ + P VLTN + R + L +
Sbjct 88 DMGVEQFSFTGGEPFVIKDFINILDYASQHRPCFVLTNATDPLLKRRHQVLPLLDNTYPI 147
Query 178 ALQISLDSATPELHDAHRGAGTWVKAVAGIRLALSLGFRVRVA-ATVASPAPGEL-TAFH 235
++SLD HD RG G++ KA+ GIR + GF+V +A T P ++ TAF
Sbjct 148 HFRVSLDFPDQARHDVDRGEGSFNKALEGIRWLVDQGFQVSIARQTDPDEIPADVETAFR 207
Query 236 DFLDGLGI 243
+ L GI
Sbjct 208 EILRDWGI 215
>gi|39937060|ref|NP_949336.1| coenzyme PQQ synthesis protein E [Rhodopseudomonas palustris
CGA009]
gi|39650917|emb|CAE29440.1| possible coenzyme PQQ synthesis protein E [Rhodopseudomonas palustris
CGA009]
Length=347
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/170 (33%), Positives = 79/170 (47%), Gaps = 3/170 (1%)
Query 87 CNLCCDYCCVSSSPSTPHRELGAERIGRIVGEAARWGVRELFLTGGEPFLLPDIDTIIAT 146
CNL C +C SP+ EL E R + E A GV L++ GGEPF PD +A+
Sbjct 24 CNLACQHCYSDCSPAKAGSELNGEEWSRFLDEIAELGVIYLYIEGGEPFHRPDFLPFLAS 83
Query 147 CVKQLPTTVLTNGMVFKGRGRRALESLPRGLALQISLDSATPELHDAHRG-AGTWVKAVA 205
+ T V TNG + + R L + G+ L + L S E+HD G +G+ +A
Sbjct 84 ASGRFLTEVRTNGTLITPQTARYLRDIRVGIVL-VDLFSPRAEVHDEITGVSGSHARACD 142
Query 206 GIRLALSLGFRVRVAATVASPAPGELTAFHDFLDGLGIAPGDQLVRPIAL 255
GIR L G V+ + +L + D D LG+ ++RP L
Sbjct 143 GIRSMLQAGIEVQTLCILNRKNVADLQGYIDLADELGVKTAG-VLRPYPL 191
>gi|302348326|ref|YP_003815964.1| Predicted Fe-S oxidoreductase [Acidilobus saccharovorans 345-15]
gi|302328738|gb|ADL18933.1| Predicted Fe-S oxidoreductase [Acidilobus saccharovorans 345-15]
Length=514
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/178 (34%), Positives = 89/178 (50%), Gaps = 8/178 (4%)
Query 71 PDRLPGVRL--WLYTNFHCNLCCDYCCVSSSPSTPHRELGAERIGRIVGEAARWGVRELF 128
P ++P L W +TN CNL C +C + TP EL E R+V E R GV +
Sbjct 136 PQKMPAPFLIVWNFTNM-CNLRCIHCYQRAGAPTPD-ELTLEEKLRVVDELDRAGVASIA 193
Query 129 LTGGEPFLLPDIDTII-ATCVKQLPTTVLTNGMVFKGRGRRALESLPRGLA-LQISLDSA 186
L+GGEP + P ++ A + + V TNG VF ++ GL +++S+DSA
Sbjct 194 LSGGEPTIHPHFHAVLKAIASRGIHAAVATNGWVFANINELE-KAKEEGLKYVEVSIDSA 252
Query 187 TPELHDAHRGA-GTWVKAVAGIRLALSLGFRVRVAATVASPAPGELTAFHDFLDGLGI 243
+PE HD RG G+W +AV + A+ LG +A T+ E+ D + +G+
Sbjct 253 SPEKHDKFRGVPGSWERAVKALENAVKLGMDHGMAVTITKMNIDEVKELLDLAEDIGV 310
>gi|296282830|ref|ZP_06860828.1| radical SAM domain-containing protein [Citromicrobium bathyomarinum
JL354]
Length=338
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/160 (35%), Positives = 75/160 (47%), Gaps = 11/160 (6%)
Query 79 LWLYTNFHCNLCCDYCCVSSSPSTPHR-ELGAERIGRIVGEAAR--WGVRELFLTGGEPF 135
LWL T CNL C C + SSP+ L AE R E R W RE+ TGGEPF
Sbjct 60 LWLCTGTLCNLACATCYIESSPTNDALIYLTAEYAARYFDEIERDGWSTREIGFTGGEPF 119
Query 136 LLPDIDTIIATCVKQ-LPTTVLTNGMVFKGRGRRAL----ESLPRGLALQISLDSATPEL 190
+ P ++ + + VL+N M R L E+ L +++SLD T +
Sbjct 120 MNPHFMAMLEDALSRGFDVLVLSNAMKPMRRHEAKLLALREAYGDKLTIRVSLDHHTKPV 179
Query 191 HDAHRGAGTWVKAVAGIRLALSLGFRVRVAATVASPAPGE 230
H+ RG +W A+ G+R GFR+ VA + PGE
Sbjct 180 HEGERGPNSWDAAIGGLRWLSEHGFRIAVAGRL---LPGE 216
>gi|336451346|ref|ZP_08621784.1| radical SAM superfamily enzyme [Idiomarina sp. A28L]
gi|336281717|gb|EGN74989.1| radical SAM superfamily enzyme [Idiomarina sp. A28L]
Length=310
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 74/150 (50%), Gaps = 8/150 (5%)
Query 79 LWLYTNFHCNLCCDYCCVSSSPSTPHR-ELGAERIGRIVGEAARWGV--RELFLTGGEPF 135
LW T CNL C+ C + SSP L + + E + + +E+ TGGEPF
Sbjct 32 LWFNTGTRCNLTCENCYIESSPENDRLVYLDVSDVEPYLTEIKQTNLPTKEIGFTGGEPF 91
Query 136 LLPDI-DTIIATCVKQLPTTVLTNGMVFKGRGRRAL----ESLPRGLALQISLDSATPEL 190
L P + D + AT + VLTN M FK R ++ L + P + ++IS+D + L
Sbjct 92 LNPKMADILEATLAQGFEVLVLTNAMRFKPRLQQRLLAMNNAFPNKITMRISIDHHSQTL 151
Query 191 HDAHRGAGTWVKAVAGIRLALSLGFRVRVA 220
H+ RG G+W + G++ F++ VA
Sbjct 152 HEEERGTGSWQPMIEGMQWLAENKFQIDVA 181
>gi|159041665|ref|YP_001540917.1| radical SAM domain-containing protein [Caldivirga maquilingensis
IC-167]
gi|157920500|gb|ABW01927.1| Radical SAM domain protein [Caldivirga maquilingensis IC-167]
Length=501
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/181 (34%), Positives = 91/181 (51%), Gaps = 8/181 (4%)
Query 68 VLGPDRLPG--VRLWLYTNFHCNLCCDYCCVSSSPSTPHRELGAERIGRIVGEAARWGVR 125
V P +LP +W +TN CNL C +C ++ P+ EL E R+V E GV
Sbjct 121 VTTPQKLPAPFFIVWNFTNL-CNLKCIHCYQNAGRPLPN-ELTLEEKLRVVKELDEAGVP 178
Query 126 ELFLTGGEPFLLPDIDTIIATCVKQ-LPTTVLTNGMVFKGRGRRALESLPRGL-ALQISL 183
+ L+GGEP + PD T++ ++ + V TNG++F A GL ++IS+
Sbjct 179 AIALSGGEPTIHPDFLTVLNEMNRRGFYSAVATNGLMFANM-EFAERVKKAGLRYVEISI 237
Query 184 DSATPELHDAHRGA-GTWVKAVAGIRLALSLGFRVRVAATVASPAPGELTAFHDFLDGLG 242
D+A P +HD RG G W KAV G+ A+ LGF +A TV ++ D +G
Sbjct 238 DAADPAVHDKFRGVEGAWDKAVRGLINAVKLGFSTALAFTVTKTNIDQVDKILDLAQEIG 297
Query 243 I 243
+
Sbjct 298 V 298
>gi|297568659|ref|YP_003690003.1| Arsenite methyltransferase [Desulfurivibrio alkaliphilus AHT2]
gi|296924574|gb|ADH85384.1| Arsenite methyltransferase [Desulfurivibrio alkaliphilus AHT2]
Length=1081
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/199 (33%), Positives = 89/199 (45%), Gaps = 10/199 (5%)
Query 53 GTLVVRRGH--PPDPA--SVLGPDRLPGVR-LWLYTNFHCNLCCDYCCVSSSPSTPHREL 107
G L+ R G PP P +L P ++ W + +CNL C +C +S P L
Sbjct 73 GRLLARLGEQVPPYPGRGELLREGENPALKECWFHLTNNCNLACRHCLFASRPGLAAESL 132
Query 108 GAERIGRIVGEAARWGVRELFLTGGEPFLLPDIDTIIATCVK--QLPTTVLTNGMVFKGR 165
AE + R + EA G R + TGGEPF PD I+ + VLTNG++
Sbjct 133 PAELLRRGLAEAREMGCRLFYFTGGEPFTYPDFTAILTGLLADPDHHAVVLTNGLLLVNH 192
Query 166 GRRALESLPRG-LALQISLDSATPELHDAHRGAGTWVKAVAGIRLALSLGFRVRVAATVA 224
L+ LP G L LQ+SLD E HD RG G++ V ++L G +A V
Sbjct 193 -LAELQKLPPGRLHLQLSLDGLA-EQHDQLRGRGSFTGLVEALQLLRRHGLAATLAVAVN 250
Query 225 SPAPGELTAFHDFLDGLGI 243
+L A DF G+
Sbjct 251 RINVEQLPAMVDFAAEQGV 269
>gi|86138318|ref|ZP_01056892.1| radical SAM domain protein [Roseobacter sp. MED193]
gi|85824843|gb|EAQ45044.1| radical SAM domain protein [Roseobacter sp. MED193]
Length=317
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/152 (33%), Positives = 78/152 (52%), Gaps = 10/152 (6%)
Query 79 LWLYTNFHCNLCCDYCCVSSSPSTPHRELGAERIGRIVGEAAR---WGVRELFLTGGEPF 135
LW T CN+ C+ C + SSP+ E R+ + W +RE+ TGGEPF
Sbjct 37 LWFNTGTLCNIECENCYILSSPTNDALVYLTEPEVRLYLDQITERGWPIREIGFTGGEPF 96
Query 136 LLPDIDTIIATCVKQ-LPTTVLTNGM--VFKGRGRRALESL----PRGLALQISLDSATP 188
+ P++ + T +++ +LTN M + + R LE L P + L++SLD P
Sbjct 97 MNPEVIAMTRTALERGFEVLILTNAMLPMMRKSMRAGLEELEAAYPGKMTLRVSLDHFAP 156
Query 189 ELHDAHRGAGTWVKAVAGIRLALSLGFRVRVA 220
E HDA RG G++ K++ G+R G ++ VA
Sbjct 157 EHHDAERGLGSFDKSIQGMRWLRDAGIKMAVA 188
>gi|94264007|ref|ZP_01287808.1| UbiE/COQ5 methyltransferase:Radical SAM [delta proteobacterium
MLMS-1]
gi|93455600|gb|EAT05785.1| UbiE/COQ5 methyltransferase:Radical SAM [delta proteobacterium
MLMS-1]
Length=1081
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/168 (33%), Positives = 78/168 (47%), Gaps = 5/168 (2%)
Query 80 WLYTNFHCNLCCDYCCVSSSPSTPHRELGAERIGRIVGEAARWGVRELFLTGGEPFLLPD 139
W + +CNL C +C +S P L AE + + + +A G R + TGGEPF PD
Sbjct 106 WFHLTNNCNLACRHCLFASRPGRAAESLPAELLSQGLAQARGLGCRLFYFTGGEPFTYPD 165
Query 140 IDTIIATCVK--QLPTTVLTNGMVFKGRGRRALESLPRG-LALQISLDSATPELHDAHRG 196
I+A + VLTNG++ L+ LP G L LQ+SLD E HD RG
Sbjct 166 FTAILADLLAAPDHHAVVLTNGLLLADH-LAELQQLPAGRLHLQLSLDGLEEE-HDQLRG 223
Query 197 AGTWVKAVAGIRLALSLGFRVRVAATVASPAPGELTAFHDFLDGLGIA 244
G++ + V ++L +A V +L A DF G+A
Sbjct 224 RGSFARLVEALQLLRRRSLAATLAVAVNRTNVEQLPAMVDFAADQGVA 271
>gi|154250870|ref|YP_001411694.1| radical SAM domain-containing protein [Parvibaculum lavamentivorans
DS-1]
gi|154154820|gb|ABS62037.1| Radical SAM domain protein [Parvibaculum lavamentivorans DS-1]
Length=330
Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/160 (35%), Positives = 81/160 (51%), Gaps = 10/160 (6%)
Query 79 LWLYTNFHCNLCCDYCCVSSSPSTPH-RELGAERIGRIVGEAARW--GVRELFLTGGEPF 135
LW+ T CN+ C C + SSP+ + A EAA + + E+ TGGEPF
Sbjct 49 LWINTGTLCNIECANCYIHSSPTDDRLTYISAAEAASFFDEAAGFSDALPEIGFTGGEPF 108
Query 136 LLPDIDTIIATCV-KQLPTTVLTNGM--VFKGRGRRAL----ESLPRGLALQISLDSATP 188
+ PD+ + + + +LTN M + + R + L E+ R L+L++SLD T
Sbjct 109 MNPDMLAMTGDALARGHAVLILTNAMQPMLRPRVKAGLLALNETYGRQLSLRVSLDHYTE 168
Query 189 ELHDAHRGAGTWVKAVAGIRLALSLGFRVRVAATVASPAP 228
LHDA RGAG++ KA+ G+R GF V VA + P
Sbjct 169 TLHDAERGAGSFAKAMEGLRWLAENGFAVSVAGRTVTGEP 208
>gi|307594547|ref|YP_003900864.1| Radical SAM domain-containing protein [Vulcanisaeta distributa
DSM 14429]
gi|307549748|gb|ADN49813.1| Radical SAM domain protein [Vulcanisaeta distributa DSM 14429]
Length=503
Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/185 (33%), Positives = 89/185 (49%), Gaps = 16/185 (8%)
Query 68 VLGPDRLPG--VRLWLYTNFHCNLCCDYCCVSSSPSTPHRELGAERIGRIVGEAARWGVR 125
V P +LP +W +TN CNL C +C ++ P+ EL E R+V E GV
Sbjct 126 VTTPQKLPAPFFIVWNFTN-ACNLKCMHCYQNAGRPLPN-ELALEEKLRVVKELDEAGVP 183
Query 126 ELFLTGGEPFLLPDIDTIIATCVKQ-LPTTVLTNGMVFKGRGRRALESLPRGLAL----- 179
+ L+GGEP + D ++A ++ + + TNG F +E R L
Sbjct 184 AIALSGGEPTVHRDFWPVLAEINRRGFYSAIATNGTTFAN-----IEFAERAKKLGLRYV 238
Query 180 QISLDSATPELHDAHRGA-GTWVKAVAGIRLALSLGFRVRVAATVASPAPGELTAFHDFL 238
+IS+D+A P +HD RG G W KAV G+R A+ LGF +A TV E+ D
Sbjct 239 EISIDAADPNVHDKFRGVPGAWAKAVQGLRNAVRLGFSAALAFTVTKYNIHEVDKILDLA 298
Query 239 DGLGI 243
+G+
Sbjct 299 QEIGV 303
>gi|206900307|ref|YP_002251638.1| antilisterial bacteriocin subtilosin biosynthesis protein AlbA,
[Dictyoglomus thermophilum H-6-12]
gi|206739410|gb|ACI18468.1| antilisterial bacteriocin subtilosin biosynthesis protein AlbA,
putative [Dictyoglomus thermophilum H-6-12]
Length=464
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/140 (37%), Positives = 77/140 (55%), Gaps = 4/140 (2%)
Query 87 CNLCCDYCCVSSSPSTPHRELGAERIGRIVGEAARWGVRELFLTGGEPFLLPDIDTIIAT 146
CNL C +C SS+ E +++ +IV + G+R + LTGGEP L P+ I++
Sbjct 133 CNLRCLHCYRSSTCEGIFIE--KDKLFKIVEVLTKKGLRMVELTGGEPTLHPNFIEILSY 190
Query 147 CVKQLP-TTVLTNGMVFKGRGRRALESLPRGLALQISLDSATPELHDAHRGA-GTWVKAV 204
+ +L +LTNG + + + L+ L + +SLDS+TPE HD RG G+W KA
Sbjct 191 LLSKLELVAILTNGTTIEEQVYKFLKINSDKLLINVSLDSSTPEFHDKFRGVKGSWEKAC 250
Query 205 AGIRLALSLGFRVRVAATVA 224
I + GF VRVA ++A
Sbjct 251 KIIAKLSNDGFIVRVAMSIA 270
>gi|322420709|ref|YP_004199932.1| Radical SAM domain-containing protein [Geobacter sp. M18]
gi|320127096|gb|ADW14656.1| Radical SAM domain protein [Geobacter sp. M18]
Length=347
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/178 (32%), Positives = 86/178 (49%), Gaps = 4/178 (2%)
Query 77 VRLWLYTNFHCNLCCDYCCVSSSPSTPHRELGAERIGRIVGEAARWGVRELFLTGGEPFL 136
V L + CNL C C +SSS H EL +V + + GV ++ GGEPF+
Sbjct 14 VNLTWEVSLACNLRCTTC-LSSSGEPAHGELTTAEALDLVEQVHQAGVFQINFGGGEPFM 72
Query 137 LPDIDTIIATCVKQ-LPTTVLTNGMVFKGRGRRALESLPRGL-ALQISLDSATPELHDAH 194
PD + I+ATC ++ + T + TNG + L P+GL A+Q+S+D A PE DA
Sbjct 73 RPDFEQILATCHERGIMTCISTNGTLIDAERVERL-GRPKGLVAIQVSMDGALPETCDAI 131
Query 195 RGAGTWVKAVAGIRLALSLGFRVRVAATVASPAPGELTAFHDFLDGLGIAPGDQLVRP 252
RG G + +AV I+L + + + E+ A + +G++ RP
Sbjct 132 RGKGVFKRAVEAIKLLSKSSIPTSINTVLTRQSAPEIPAMYQLARAMGVSLRVSRFRP 189
>gi|218777947|ref|YP_002429265.1| radical SAM domain-containing protein [Desulfatibacillum alkenivorans
AK-01]
gi|218759331|gb|ACL01797.1| Radical SAM domain protein [Desulfatibacillum alkenivorans AK-01]
Length=292
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/226 (30%), Positives = 104/226 (47%), Gaps = 15/226 (6%)
Query 74 LPGVRLWLYTNFHCNLCCDYCCVSSSPSTPHRELGAERIGRIVGEAARWGVRELFLTGGE 133
L G + + C C +C ++ EL +I ++ + ++ G L+L GGE
Sbjct 5 LFGATAMISLTYQCQCQCPHCGSRTNQQKNRPELSKSQIIDLIKQCSKAGTANLYLFGGE 64
Query 134 PFLLPDIDTIIATCVK-QLPTTVLTNGMVFKGRGRRALESLPRGLALQISLDSATPELHD 192
P L P++D + T + ++ TNG + ++L +L +++S+D A P LHD
Sbjct 65 PLLHPNLDDFVRTAKGLGMRVSMDTNGYLLDSDRVKSLAALGVD-HVRVSIDHARPRLHD 123
Query 193 AHRGA-GTWVKAVAGIRLALSLGFRVRVA--ATVASPAPGELTAFHDFLDGLGIAPGDQL 249
A RG G +AV G+RL L G R V+ AT + A G L A D GLG ++
Sbjct 124 AFRGVEGLHARAVQGVRLCLENGVRCDVSAVATKKNLADGNLQAVLDLAGGLGARV--RM 181
Query 250 VRPIALEG-AASQGVALTRESLVPEVTVTADG-VYW------HPVA 287
+ I G + V L+R+ + + G VYW HP A
Sbjct 182 LTSIMCGGWEGKKRVVLSRDEIAQMRNLLKPGRVYWESDWINHPQA 227
>gi|301167255|emb|CBW26837.1| putative molybdopterin biosynthesis protein [Bacteriovorax marinus
SJ]
Length=311
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/237 (28%), Positives = 99/237 (42%), Gaps = 31/237 (13%)
Query 79 LWLYTNFHCNLCCDYCCVSSSPSTPH-RELGAERIGRIVGEAAR--WGVRELFLTGGEPF 135
LW + CNL CD C + SSP L + + + E W + + +TGGEPF
Sbjct 32 LWFNSGTLCNLACDNCYIESSPKNDRLAYLTLADVKKYIDEVKENSWQLESIGITGGEPF 91
Query 136 LLPDIDTIIATCVKQ-LPTTVLTNGMVFKGRGRRALESLPRG----LALQISLDSATPEL 190
L P I I+ C+ +P VLTN R + L +L L L++SLD T E+
Sbjct 92 LNPHIIEILEECLSLGVPVLVLTNAHKVLKRWEKKLLALKEQYSDLLRLRVSLDHYTKEI 151
Query 191 HDAHRGAGTWVKAVAGIRLALSLGFRVRVA--------ATVASPAPGELTAFHDFLDGLG 242
H+ RG GT+ + + F + +A VA G L H +
Sbjct 152 HEGERGEGTFAPTMKSLEWLYLNEFHISIAGRSLFKESQEVAKQGYGNLLKKHKI--DIE 209
Query 243 IAPGDQLVRPIALEGAASQGVALTRESLVPEVTVTADGVYWHPVAATDERALVTRTV 299
I+P ++ P E A++ VPE+TV + V+ TD+ R +
Sbjct 210 ISPDTLVIFP---EMKATED--------VPEITVDCWNIL--NVSPTDQMCSTQRMI 253
>gi|339483734|ref|YP_004695520.1| Radical SAM domain-containing protein [Nitrosomonas sp. Is79A3]
gi|338805879|gb|AEJ02121.1| Radical SAM domain protein [Nitrosomonas sp. Is79A3]
Length=317
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/171 (30%), Positives = 77/171 (46%), Gaps = 6/171 (3%)
Query 79 LWLYTNFHCNLCCDYCCVSSSPSTPHRELGAERIGR-IVGEAARWGVRELFLTGGEPFLL 137
LW +T CNL C +C S P +L R + EA GV++ TGGEPF+
Sbjct 41 LWFHTGTACNLACPFCLEGSKPGDDRLQLMRFDDARPFIDEALTLGVKQFSFTGGEPFIN 100
Query 138 PDIDTIIATCVKQLPTTVLTNG---MVFKGRGRRALESLPRGLALQISLDSATPELHDAH 194
D+ I+ ++ P VLTN ++ + + L + ++SLD + E HD +
Sbjct 101 KDLIHILDYALQHRPCMVLTNATEPLIKRLSQLKPLRERSNAVHFRVSLDHFSAEQHDKN 160
Query 195 RGAGTWVKAVAGIRLALSLGFRVRVAATVASPAPGELTA--FHDFLDGLGI 243
RG G + A+ G+ +GF V VA P A F + G G+
Sbjct 161 RGEGMFSMALDGLCALHDMGFSVSVANQTIPGLPAHKVAKCFAEVFRGAGL 211
>gi|254466456|ref|ZP_05079867.1| radical SAM domain protein [Rhodobacterales bacterium Y4I]
gi|206687364|gb|EDZ47846.1| radical SAM domain protein [Rhodobacterales bacterium Y4I]
Length=317
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/152 (34%), Positives = 78/152 (52%), Gaps = 10/152 (6%)
Query 79 LWLYTNFHCNLCCDYCCVSSSPSTPHR-ELGAERIGRIVGEAAR--WGVRELFLTGGEPF 135
LW T CN+ C C + SSP+ L + + + A+ W VRE+ TGGEPF
Sbjct 37 LWFNTGTLCNIECSNCYILSSPANDALVYLTEAEVRSYLDQIAQRGWPVREIGFTGGEPF 96
Query 136 LLPDIDTIIATCVKQ-LPTTVLTNGM--VFKGRGRRAL----ESLPRGLALQISLDSATP 188
+ P++ + T +++ +LTN M + + R L E+ L L+IS+D +
Sbjct 97 MNPEMTAMARTALERGFEVLILTNAMRPMMRKTVRAGLLDLRETFGDKLTLRISVDHHSA 156
Query 189 ELHDAHRGAGTWVKAVAGIRLALSLGFRVRVA 220
ELHD RGAG++ K + G+ GFR+ VA
Sbjct 157 ELHDKERGAGSFAKTIEGMEWLRENGFRMAVA 188
>gi|254511606|ref|ZP_05123673.1| radical SAM domain protein [Rhodobacteraceae bacterium KLH11]
gi|221535317|gb|EEE38305.1| radical SAM domain protein [Rhodobacteraceae bacterium KLH11]
Length=317
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/152 (33%), Positives = 75/152 (50%), Gaps = 10/152 (6%)
Query 79 LWLYTNFHCNLCCDYCCVSSSPSTPHR-ELGAERIGRIVGEAA--RWGVRELFLTGGEPF 135
LW T CN+ C C ++SSP+ + + + + + W +RE+ TGGEPF
Sbjct 37 LWFNTGTLCNIECVNCYIASSPTNDALVYITTDEVRDYLDQIQERNWPIREIGFTGGEPF 96
Query 136 LLPD-IDTIIATCVKQLPTTVLTNGM--VFKGRGRRALESLPRG----LALQISLDSATP 188
+ P ID A + +LTN M + + + R L L R L L+IS+D P
Sbjct 97 MNPQMIDMTRAALERGYEVLILTNAMLPMMRRKMREGLLELQRDYADKLTLRISVDHYRP 156
Query 189 ELHDAHRGAGTWVKAVAGIRLALSLGFRVRVA 220
ELHD RG G++ K + G+ GFR+ +A
Sbjct 157 ELHDEERGKGSFAKTLTGMEWLRDNGFRMAIA 188
>gi|218777874|ref|YP_002429192.1| family 2 glycosyl transferase [Desulfatibacillum alkenivorans
AK-01]
gi|218759258|gb|ACL01724.1| glycosyl transferase family 2 [Desulfatibacillum alkenivorans
AK-01]
Length=724
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/188 (36%), Positives = 93/188 (50%), Gaps = 24/188 (12%)
Query 62 PPDPASVLGPDRLPGVRLWLYTNFHCNLCCDYCCVSSSPSTPHRELGAERIGRIVGEAAR 121
PP PA LP + +TN +C L C C + S EL E+ + + +
Sbjct 398 PPSPA-------LPRIVSMKFTN-NCQLKCRMCGIWSQEKEA--ELPGEQWRKAIDKVFH 447
Query 122 W-GVRELFLTGGEPFLLPDIDTIIA-TCVKQLPTTVLTNG-MVFKGRGRRALESLPRGL- 177
W G L + GGEP L PD D + A + T +L+NG ++ K R R+ L+S GL
Sbjct 448 WLGPYRLDIAGGEPLLRPDNDELTAYASALGVETVLLSNGALITKARARKLLDS---GLD 504
Query 178 ALQISLDSATPELHDAHRG-AGTWVKAVAG------IRLALSLGFRVRVAATVASPAPGE 230
++ ISLDS PE+HD RG AGT+ KA +R S F + VAA V +P E
Sbjct 505 SIHISLDSLNPEVHDRMRGKAGTFAKATKALKHLQELRRYRSKDFSIGVAAIVMAPNVEE 564
Query 231 LTAFHDFL 238
L A +F+
Sbjct 565 LPALAEFV 572
>gi|192292888|ref|YP_001993493.1| radical SAM domain-containing protein [Rhodopseudomonas palustris
TIE-1]
gi|192286637|gb|ACF03018.1| Radical SAM domain protein [Rhodopseudomonas palustris TIE-1]
Length=347
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/170 (32%), Positives = 78/170 (46%), Gaps = 3/170 (1%)
Query 87 CNLCCDYCCVSSSPSTPHRELGAERIGRIVGEAARWGVRELFLTGGEPFLLPDIDTIIAT 146
CNL C +C SP+ EL E R + E A GV L++ GGEPF PD +A+
Sbjct 24 CNLACQHCYSDCSPAKAGSELNGEEWSRFLDEIAELGVIYLYIEGGEPFHRPDFLPFLAS 83
Query 147 CVKQLPTTVLTNGMVFKGRGRRALESLPRGLALQISLDSATPELHDAHRG-AGTWVKAVA 205
+ T V TNG + + L + G+ L + L S ++HD G +G+ +A
Sbjct 84 ASGRFLTEVRTNGTLITPQTAGYLRDIRVGIVL-VDLFSPRAQVHDEITGVSGSHARACD 142
Query 206 GIRLALSLGFRVRVAATVASPAPGELTAFHDFLDGLGIAPGDQLVRPIAL 255
GIR L G V+ + +L + D D LG+ ++RP L
Sbjct 143 GIRSMLQAGIEVQTLCILNRKNVADLQGYIDLADELGVKTAG-VLRPYPL 191
>gi|148265581|ref|YP_001232287.1| radical SAM domain-containing protein [Geobacter uraniireducens
Rf4]
gi|146399081|gb|ABQ27714.1| Radical SAM domain protein [Geobacter uraniireducens Rf4]
Length=347
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/177 (30%), Positives = 85/177 (49%), Gaps = 3/177 (1%)
Query 77 VRLWLYTNFHCNLCCDYCCVSSSPSTPHRELGAERIGRIVGEAARWGVRELFLTGGEPFL 136
V L + CNL C +C +SSS EL +V + + GV ++ GGEPFL
Sbjct 14 VNLTWEVSLACNLRCTHC-LSSSGEPAAGELSTAEALDLVEQVHQAGVFQINFGGGEPFL 72
Query 137 LPDIDTIIATCV-KQLPTTVLTNGMVFKGRGRRALESLPRGLALQISLDSATPELHDAHR 195
PD + I+ C + + T + TNG + R A + R +A+Q+S+D AT E DA R
Sbjct 73 RPDFEEILVACHGRGIMTCISTNGTLLNAE-RVARLATTRLVAIQVSMDGATAETCDAIR 131
Query 196 GAGTWVKAVAGIRLALSLGFRVRVAATVASPAPGELTAFHDFLDGLGIAPGDQLVRP 252
G G + KA+ I+L + + + + ++ A ++ LG++ RP
Sbjct 132 GKGVYHKAIEAIKLLAATSIPTSINTVLTTQNASQIPAMYEMAHSLGVSLRVSRFRP 188
>gi|120553089|ref|YP_957440.1| radical SAM domain-containing protein [Marinobacter aquaeolei
VT8]
gi|120322938|gb|ABM17253.1| Radical SAM domain protein [Marinobacter aquaeolei VT8]
Length=307
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/162 (34%), Positives = 76/162 (47%), Gaps = 8/162 (4%)
Query 64 DPASVLGPDRLPGVRLWLYTNFHCNLCCDYCCVSSSPSTPHRELGAERIG--RIVGEAAR 121
D + DRL LW++T CNL C +C S P R G + I + EA
Sbjct 19 DSRGYIDADRLK--ELWIHTGTACNLACPFCLEGSHPGD-GRIPGMKLIDVKPFIHEAID 75
Query 122 WGVRELFLTGGEPFLLPDIDTIIATCVKQLPTTVLTNGMV-FKGRGRRALESL--PRGLA 178
GV + TGGEPF++ D I+ + P VLTN R + L L P +
Sbjct 76 MGVEQFSFTGGEPFVIRDFVNILDYASQYRPCFVLTNATEPLHKRQHQVLPLLDNPYPIH 135
Query 179 LQISLDSATPELHDAHRGAGTWVKAVAGIRLALSLGFRVRVA 220
++SLD HD RG G++ +A+ GIR + GF+V +A
Sbjct 136 FRVSLDFPDRARHDKDRGEGSFDEALQGIRWLIEQGFKVSIA 177
>gi|170289717|ref|YP_001736533.1| radical SAM domain-containing protein [Candidatus Korarchaeum
cryptofilum OPF8]
gi|170173797|gb|ACB06850.1| Radical SAM domain protein [Candidatus Korarchaeum cryptofilum
OPF8]
Length=477
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/178 (31%), Positives = 88/178 (50%), Gaps = 8/178 (4%)
Query 71 PDRL--PGVRLWLYTNFHCNLCCDYCCVSSSPSTPHRELGAERIGRIVGEAARWGVRELF 128
P RL P + +W +T CNL C +C ++S P EL E ++ + GV +
Sbjct 107 PQRLYSPFMVVWDFTK-RCNLSCLHCYANASYLPPPDELNLEERLSVLSQLDEAGVAAIS 165
Query 129 LTGGEPFLLPDIDTIIATCVKQ-LPTTVLTNGMVFKGRGRRALESLPRGL-ALQISLDSA 186
+GGEP ++PD + + + ++ TNG + K R L+ + G+ +++SLDS
Sbjct 166 FSGGEPLIVPDFWEVARRAAQAGMYISIATNGTLIKPEVARRLKEI--GVRYVEVSLDSP 223
Query 187 TPELHDAHRGA-GTWVKAVAGIRLALSLGFRVRVAATVASPAPGELTAFHDFLDGLGI 243
PE HD+ RG G W ++V GI+ A S G V +A T+ E+ LG+
Sbjct 224 NPESHDSFRGIRGAWERSVEGIKNAKSAGMDVGIAMTITKKNYREVADMIKLAKELGV 281
>gi|189499239|ref|YP_001958709.1| Radical SAM domain-containing protein [Chlorobium phaeobacteroides
BS1]
gi|189494680|gb|ACE03228.1| Radical SAM domain protein [Chlorobium phaeobacteroides BS1]
Length=1005
Score = 75.9 bits (185), Expect = 8e-12, Method: Composition-based stats.
Identities = 56/167 (34%), Positives = 81/167 (49%), Gaps = 7/167 (4%)
Query 79 LWLYTNFHCNLCCDYCCVSSSPSTPHRELGAERIGRIVGEAARWGVRELFLTGGEPFLLP 138
LW + CN+ C +C SSSP EL AE I + GEA + G R LTGGEP +
Sbjct 83 LWFHITNRCNMACSHCLFSSSPEE-EAELSAEDILSLAGEAWQQGCRLFALTGGEPLVHR 141
Query 139 DIDTIIATCVKQLPTT---VLTNGMVFKGRGRRALESLPRGLALQISLDSATPELHDAHR 195
+ID I+ + +LP T +LTNG++ K + +L + LQISLD E HD+ R
Sbjct 142 EIDRIV-NGILELPDTHLVILTNGLLIK-KLFSSLNGDSHRVHLQISLD-GLEENHDSLR 198
Query 196 GAGTWVKAVAGIRLALSLGFRVRVAATVASPAPGELTAFHDFLDGLG 242
G + K A ++ G ++ V ++ DF +G
Sbjct 199 GKDAFSKLTANLQWLKKEGIFYTLSMCVTRQNIPDMEPMIDFAASVG 245
>gi|126731382|ref|ZP_01747189.1| radical SAM domain protein [Sagittula stellata E-37]
gi|126708293|gb|EBA07352.1| radical SAM domain protein [Sagittula stellata E-37]
Length=329
Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/157 (34%), Positives = 77/157 (50%), Gaps = 20/157 (12%)
Query 79 LWLYTNFHCNLCCDYCCVSSSP--------STPHRELGAERIGRIVGEAARWGVRELFLT 130
LW T CN+ C C + SSP +T E +++ E WGVRE+ T
Sbjct 49 LWFNTGTLCNITCANCYIESSPENDSLVYITTAEVESYLDQL-----EDRDWGVREIGFT 103
Query 131 GGEPFLLPDIDTIIATCVKQ-LPTTVLTNGM--VFKGRGRRALESLPRG----LALQISL 183
GGEPF+ P++ + +++ +LTN M + + +R L L L L+ISL
Sbjct 104 GGEPFMNPEMIAMTRAALERGYEVLILTNAMRPMMRPHVQRGLRELQAEHGDRLNLRISL 163
Query 184 DSATPELHDAHRGAGTWVKAVAGIRLALSLGFRVRVA 220
D + HDA RGAG++ K + G+R G R+ VA
Sbjct 164 DHYSASQHDAERGAGSFAKTIEGMRWLRDEGIRMAVA 200
>gi|210610643|ref|ZP_03288543.1| hypothetical protein CLONEX_00733 [Clostridium nexile DSM 1787]
gi|210152365|gb|EEA83371.1| hypothetical protein CLONEX_00733 [Clostridium nexile DSM 1787]
Length=367
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/165 (28%), Positives = 78/165 (48%), Gaps = 8/165 (4%)
Query 87 CNLCCDYCCVSSSPSTPHRELGAERIGRIVGEAARWGVRELFLTGGEPFLLPDIDTIIAT 146
CN C YCC + + EL I ++ +WGV ++ GGEPFL DI I+
Sbjct 16 CNYDCIYCCADAKYKFDN-ELTFLEIVSLIDSLYQWGVMDITFAGGEPFLRKDIMDIMKY 74
Query 147 CVKQ--LPTTVLTNGMVFKGRGRRALESLPRGLALQISLDSATPELHD----AHRGAGTW 200
++ L +T++TNG + + LE L + + L IS DSA P+++D ++RG +
Sbjct 75 ANEKRGLNSTIVTNGSLLSEQDLENLEKL-KNVNLLISFDSADPQIYDMARKSYRGIENF 133
Query 201 VKAVAGIRLALSLGFRVRVAATVASPAPGELTAFHDFLDGLGIAP 245
K +A I+ A +A + + ++ + LG+
Sbjct 134 QKVLANIKFAAKEKMTFALALVLNKYTINDFYKTYETMINLGVKS 178
>gi|55820959|ref|YP_139401.1| metallo cofactor biosynthesis protein [Streptococcus thermophilus
LMG 18311]
gi|55822878|ref|YP_141319.1| metallo cofactor biosynthesis protein [Streptococcus thermophilus
CNRZ1066]
gi|116627737|ref|YP_820356.1| radical SAM superfamily protein [Streptococcus thermophilus LMD-9]
gi|55736944|gb|AAV60586.1| metallo cofactor biosynthesis protein (moaA / nifB / pqqE family)
[Streptococcus thermophilus LMG 18311]
gi|55738863|gb|AAV62504.1| metallo cofactor biosynthesis protein (moaA / nifB / pqqE family)
[Streptococcus thermophilus CNRZ1066]
gi|116101014|gb|ABJ66160.1| Radical SAM superfamily enzyme [Streptococcus thermophilus LMD-9]
gi|312278286|gb|ADQ62943.1| Radical SAM superfamily enzyme [Streptococcus thermophilus ND03]
gi|339278072|emb|CCC19820.1| metallo cofactor biosynthesis protein (MoaA / nifB / pqqE family)
[Streptococcus thermophilus JIM 8232]
Length=365
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/160 (32%), Positives = 78/160 (49%), Gaps = 6/160 (3%)
Query 86 HCNLCCDYCCVSSSPSTPHRELGAERIGRIVGEAARWGVRELFLTGGEPFLLPDIDTIIA 145
CNL C +C + +EL ++I IV EA + GV ++ TGGEP LL + II
Sbjct 57 KCNLRCMHCYLPDYS----KELDRKKISSIVYEAKQLGVMDVDFTGGEPLLLQGLSEIIE 112
Query 146 TCVKQ-LPTTVLTNGMVFKGRGRRALESLPRGLALQISLDSATPELHDAHRGAGTWVKAV 204
+K+ + TT+ TN V+ + L G+ L++SLD +HD+ RG GT+ + +
Sbjct 113 EVLKEGMCTTIFTNA-VYIPEDFKILIQRYDGIRLKVSLDGWNETIHDSIRGRGTFKRTI 171
Query 205 AGIRLALSLGFRVRVAATVASPAPGELTAFHDFLDGLGIA 244
I SLG V V + + + F + D L +
Sbjct 172 KNIEYFRSLGVPVTVNVVLNNKNISGVKYFLELFDRLDVK 211
>gi|325982629|ref|YP_004295031.1| Radical SAM domain-containing protein [Nitrosomonas sp. AL212]
gi|325532148|gb|ADZ26869.1| Radical SAM domain protein [Nitrosomonas sp. AL212]
Length=314
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 77/175 (44%), Gaps = 7/175 (4%)
Query 79 LWLYTNFHCNLCCDYCCVSSSPSTPHRELG-AERIGRIVGEAARWGVRELFLTGGEPFLL 137
LW +T CNL C +C S P +L + + + EA GV++ TGGEPF+
Sbjct 39 LWFHTGTACNLACPFCLEGSKPGDDRLQLMRFDDVKPFIDEAIALGVKQFSFTGGEPFIN 98
Query 138 PDIDTIIATCVKQLPTTVLTNGMVFKGRGRRALESL---PRGLALQISLDSATPELHDAH 194
DI I+ ++ P VLTN + LESL + ++SLD HD
Sbjct 99 KDIVRILDYALQYRPCMVLTNATEPLIKRLPQLESLREHSHAVHFRVSLDHFLAHEHDKG 158
Query 195 RGAGTWVKAVAGIRLALSLGFRVRVAATVAS--PAPGELTAFHDFLDGLGIAPGD 247
RG G + A+ G+ GF V VA S PA F + G G+ P D
Sbjct 159 RGEGMFSMALDGLCALSDRGFSVSVANQKISGLPASKVANCFSEVFRGAGL-PKD 212
>gi|341615940|ref|ZP_08702809.1| radical SAM domain-containing protein [Citromicrobium sp. JLT1363]
Length=334
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/160 (33%), Positives = 73/160 (46%), Gaps = 11/160 (6%)
Query 79 LWLYTNFHCNLCCDYCCVSSSPSTPHR-ELGAERIGRIVGEAAR--WGVRELFLTGGEPF 135
LWL T CNL C C + SSP+ L E R E R W RE+ TGGEPF
Sbjct 56 LWLCTGTLCNLACATCYIESSPTNDALIYLTHEHAARYFDEIERDGWNTREIGFTGGEPF 115
Query 136 LLPDIDTIIATCVKQ-LPTTVLTNGMVFKGRGRRAL----ESLPRGLALQISLDSATPEL 190
+ P ++ + + VL+N M R L E+ L +++SLD T +
Sbjct 116 MNPHFLPMLEDALSRGFEALVLSNAMKPMRRHEAKLLALREAYGAKLTIRVSLDHHTKAV 175
Query 191 HDAHRGAGTWVKAVAGIRLALSLGFRVRVAATVASPAPGE 230
H+ RG +W A+ G++ FR+ VA + PGE
Sbjct 176 HEGERGPDSWDAAIGGLKWLSDNHFRIAVAGRL---LPGE 212
Lambda K H
0.322 0.137 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 586667724920
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40