BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1684 Length=74 Score E Sequences producing significant alignments: (Bits) Value gi|15608822|ref|NP_216200.1| hypothetical protein Rv1684 [Mycoba... 143 1e-32 gi|296164581|ref|ZP_06847149.1| conserved hypothetical protein [... 118 2e-25 gi|254819730|ref|ZP_05224731.1| hypothetical protein MintA_07394... 115 3e-24 gi|254775540|ref|ZP_05217056.1| hypothetical protein MaviaA2_128... 110 5e-23 gi|118463854|ref|YP_882272.1| hypothetical protein MAV_3087 [Myc... 108 2e-22 gi|41407488|ref|NP_960324.1| hypothetical protein MAP1390 [Mycob... 107 9e-22 gi|342860739|ref|ZP_08717389.1| hypothetical protein MCOL_17748 ... 105 2e-21 gi|240170131|ref|ZP_04748790.1| hypothetical protein MkanA1_1251... 105 3e-21 gi|15827701|ref|NP_301964.1| hypothetical protein ML1347 [Mycoba... 103 1e-20 gi|333990482|ref|YP_004523096.1| hypothetical protein JDM601_184... 102 3e-20 gi|118617294|ref|YP_905626.1| hypothetical protein MUL_1661 [Myc... 100 5e-20 gi|226360092|ref|YP_002777870.1| hypothetical protein ROP_06780 ... 89.0 2e-16 gi|118467750|ref|YP_888059.1| hypothetical protein MSMEG_3764 [M... 87.8 5e-16 gi|226306762|ref|YP_002766722.1| hypothetical protein RER_32750 ... 87.0 9e-16 gi|325674257|ref|ZP_08153946.1| hypothetical protein HMPREF0724_... 86.7 1e-15 gi|145224099|ref|YP_001134777.1| hypothetical protein Mflv_3515 ... 85.9 2e-15 gi|319948167|ref|ZP_08022327.1| hypothetical protein ES5_02439 [... 85.9 2e-15 gi|54023954|ref|YP_118196.1| hypothetical protein nfa19860 [Noca... 85.9 2e-15 gi|111017961|ref|YP_700933.1| hypothetical protein RHA1_ro00947 ... 84.3 5e-15 gi|108799926|ref|YP_640123.1| hypothetical protein Mmcs_2960 [My... 83.2 1e-14 gi|120404274|ref|YP_954103.1| hypothetical protein Mvan_3299 [My... 83.2 1e-14 gi|333919186|ref|YP_004492767.1| hypothetical protein AS9A_1515 ... 82.8 1e-14 gi|296140092|ref|YP_003647335.1| hypothetical protein Tpau_2390 ... 79.3 2e-13 gi|317507373|ref|ZP_07965108.1| hypothetical protein HMPREF9336_... 74.3 5e-12 gi|296393965|ref|YP_003658849.1| hypothetical protein Srot_1556 ... 70.9 7e-11 gi|262202731|ref|YP_003273939.1| hypothetical protein Gbro_2832 ... 65.9 2e-09 gi|239985948|ref|ZP_04706612.1| hypothetical protein SrosN1_0144... 65.9 2e-09 gi|29832274|ref|NP_826908.1| hypothetical protein SAV_5731 [Stre... 65.5 3e-09 gi|297199453|ref|ZP_06916850.1| conserved hypothetical protein [... 63.5 1e-08 gi|343928297|ref|ZP_08767749.1| hypothetical protein GOALK_113_0... 63.2 1e-08 gi|294816165|ref|ZP_06774808.1| Trm112p domain-containing protei... 63.2 1e-08 gi|290960729|ref|YP_003491911.1| hypothetical protein SCAB_63621... 62.8 2e-08 gi|302545681|ref|ZP_07298023.1| conserved hypothetical protein [... 62.4 2e-08 gi|297195807|ref|ZP_06913205.1| conserved hypothetical protein [... 62.0 3e-08 gi|256372530|ref|YP_003110354.1| hypothetical protein Afer_1767 ... 62.0 3e-08 gi|302551178|ref|ZP_07303520.1| conserved hypothetical protein [... 61.6 4e-08 gi|296119700|ref|ZP_06838258.1| tetraacyldisaccharide 4'-kinase ... 61.2 5e-08 gi|227505063|ref|ZP_03935112.1| conserved hypothetical protein [... 61.2 5e-08 gi|213966315|ref|ZP_03394497.1| tetraacyldisaccharide 4'-kinase ... 60.8 6e-08 gi|291439822|ref|ZP_06579212.1| conserved hypothetical protein [... 60.8 7e-08 gi|146386932|pdb|2JNY|A Chain A, Solution Nmr Structure Of Prote... 59.3 2e-07 gi|19552622|ref|NP_600624.1| hypothetical protein NCgl1351 [Cory... 59.3 2e-07 gi|300781254|ref|ZP_07091108.1| tetraacyldisaccharide 4'-kinase ... 58.9 3e-07 gi|259505647|ref|ZP_05748549.1| conserved hypothetical protein [... 58.9 3e-07 gi|25028095|ref|NP_738149.1| hypothetical protein CE1539 [Coryne... 58.5 3e-07 gi|145295539|ref|YP_001138360.1| hypothetical protein cgR_1467 [... 58.2 4e-07 gi|311740482|ref|ZP_07714309.1| tetraacyldisaccharide 4'-kinase ... 58.2 4e-07 gi|227548149|ref|ZP_03978198.1| conserved hypothetical protein [... 57.8 5e-07 gi|225022591|ref|ZP_03711783.1| hypothetical protein CORMATOL_02... 56.6 1e-06 gi|305682028|ref|ZP_07404832.1| conserved hypothetical protein [... 56.6 1e-06 >gi|15608822|ref|NP_216200.1| hypothetical protein Rv1684 [Mycobacterium tuberculosis H37Rv] gi|15841141|ref|NP_336178.1| hypothetical protein MT1724 [Mycobacterium tuberculosis CDC1551] gi|31792870|ref|NP_855363.1| hypothetical protein Mb1710A [Mycobacterium bovis AF2122/97] 63 more sequence titles Length=74 Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 74/74 (100%), Positives = 74/74 (100%), Gaps = 0/74 (0%) Query 1 MLDEALLAILVCPADRGPLVLVEDGDIQVLYNPRLRRAYRIEDGIPVLLVDEAREVDEDE 60 MLDEALLAILVCPADRGPLVLVEDGDIQVLYNPRLRRAYRIEDGIPVLLVDEAREVDEDE Sbjct 1 MLDEALLAILVCPADRGPLVLVEDGDIQVLYNPRLRRAYRIEDGIPVLLVDEAREVDEDE 60 Query 61 HARLMARGRPAAPQ 74 HARLMARGRPAAPQ Sbjct 61 HARLMARGRPAAPQ 74 >gi|296164581|ref|ZP_06847149.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295900061|gb|EFG79499.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=71 Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 61/74 (83%), Positives = 71/74 (96%), Gaps = 3/74 (4%) Query 1 MLDEALLAILVCPADRGPLVLVEDGDIQVLYNPRLRRAYRIEDGIPVLLVDEAREVDEDE 60 M+D+ALL+ILVCPADRGPL+LV+D ++LYNPRLRRAYRIEDGIPVLLVDEAR+VD+DE Sbjct 1 MIDDALLSILVCPADRGPLLLVDD---ELLYNPRLRRAYRIEDGIPVLLVDEARDVDDDE 57 Query 61 HARLMARGRPAAPQ 74 HARLMARGRPAAP+ Sbjct 58 HARLMARGRPAAPR 71 >gi|254819730|ref|ZP_05224731.1| hypothetical protein MintA_07394 [Mycobacterium intracellulare ATCC 13950] Length=75 Score = 115 bits (287), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 60/75 (80%), Positives = 68/75 (91%), Gaps = 1/75 (1%) Query 1 MLDEALLAILVCPADRGPLVLV-EDGDIQVLYNPRLRRAYRIEDGIPVLLVDEAREVDED 59 M+D+ALL ILVCPADRGPLVLV + G +VLYNPRLRRAYRIEDGIPVLL+DEAR+VD+D Sbjct 1 MIDDALLNILVCPADRGPLVLVSQTGGGEVLYNPRLRRAYRIEDGIPVLLIDEARDVDDD 60 Query 60 EHARLMARGRPAAPQ 74 EHARLMA+G PA PQ Sbjct 61 EHARLMAQGPPADPQ 75 >gi|254775540|ref|ZP_05217056.1| hypothetical protein MaviaA2_12848 [Mycobacterium avium subsp. avium ATCC 25291] Length=71 Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 58/74 (79%), Positives = 67/74 (91%), Gaps = 3/74 (4%) Query 1 MLDEALLAILVCPADRGPLVLVEDGDIQVLYNPRLRRAYRIEDGIPVLLVDEAREVDEDE 60 M+DEALL ILVCPADRGPLVLV ++LYNPRLRRAYRIEDGIPVLL+DEAR+VD++E Sbjct 1 MIDEALLNILVCPADRGPLVLVGQ---ELLYNPRLRRAYRIEDGIPVLLIDEARDVDDEE 57 Query 61 HARLMARGRPAAPQ 74 HARLMA+GRPA P+ Sbjct 58 HARLMAQGRPADPR 71 >gi|118463854|ref|YP_882272.1| hypothetical protein MAV_3087 [Mycobacterium avium 104] gi|118165141|gb|ABK66038.1| conserved hypothetical protein [Mycobacterium avium 104] Length=71 Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 57/74 (78%), Positives = 66/74 (90%), Gaps = 3/74 (4%) Query 1 MLDEALLAILVCPADRGPLVLVEDGDIQVLYNPRLRRAYRIEDGIPVLLVDEAREVDEDE 60 M+DEALL ILVCPADRGPLVLV ++LYNPRLRRAYRIEDGIPVLL+ EAR+VD++E Sbjct 1 MIDEALLNILVCPADRGPLVLVGQ---ELLYNPRLRRAYRIEDGIPVLLIGEARDVDDEE 57 Query 61 HARLMARGRPAAPQ 74 HARLMA+GRPA P+ Sbjct 58 HARLMAQGRPADPR 71 >gi|41407488|ref|NP_960324.1| hypothetical protein MAP1390 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395840|gb|AAS03707.1| hypothetical protein MAP_1390 [Mycobacterium avium subsp. paratuberculosis K-10] gi|336457842|gb|EGO36836.1| hypothetical protein MAPs_19410 [Mycobacterium avium subsp. paratuberculosis S397] Length=71 Score = 107 bits (266), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 57/74 (78%), Positives = 66/74 (90%), Gaps = 3/74 (4%) Query 1 MLDEALLAILVCPADRGPLVLVEDGDIQVLYNPRLRRAYRIEDGIPVLLVDEAREVDEDE 60 M+DEALL ILVCPADRGPLVLV ++LYNPRLRRAYRIEDGIPVLL+DEAR+VD++E Sbjct 1 MIDEALLNILVCPADRGPLVLVGQ---ELLYNPRLRRAYRIEDGIPVLLMDEARDVDDEE 57 Query 61 HARLMARGRPAAPQ 74 HARLMA+ RPA P+ Sbjct 58 HARLMAQVRPADPR 71 >gi|342860739|ref|ZP_08717389.1| hypothetical protein MCOL_17748 [Mycobacterium colombiense CECT 3035] gi|342131763|gb|EGT85020.1| hypothetical protein MCOL_17748 [Mycobacterium colombiense CECT 3035] Length=71 Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 55/74 (75%), Positives = 64/74 (87%), Gaps = 3/74 (4%) Query 1 MLDEALLAILVCPADRGPLVLVEDGDIQVLYNPRLRRAYRIEDGIPVLLVDEAREVDEDE 60 M+D+ALL+ILVCP DRGPLVLV + LYNPRLRRAYRIEDGIPVLL+DEAR+V E+E Sbjct 1 MIDDALLSILVCPDDRGPLVLVGS---EWLYNPRLRRAYRIEDGIPVLLIDEARDVGEEE 57 Query 61 HARLMARGRPAAPQ 74 HAR+MA GRPA P+ Sbjct 58 HARIMAEGRPADPR 71 >gi|240170131|ref|ZP_04748790.1| hypothetical protein MkanA1_12513 [Mycobacterium kansasii ATCC 12478] Length=72 Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 55/74 (75%), Positives = 63/74 (86%), Gaps = 2/74 (2%) Query 1 MLDEALLAILVCPADRGPLVLVEDGDIQVLYNPRLRRAYRIEDGIPVLLVDEAREVDEDE 60 M+DE LL ILVCPAD+GPL+LV+DG Q LYNPRLRRAYRIEDGIPVLLVD+AR+V +DE Sbjct 1 MIDEKLLDILVCPADQGPLLLVDDG--QALYNPRLRRAYRIEDGIPVLLVDQARDVGDDE 58 Query 61 HARLMARGRPAAPQ 74 HAR A G AAP+ Sbjct 59 HARFTAPGPSAAPR 72 >gi|15827701|ref|NP_301964.1| hypothetical protein ML1347 [Mycobacterium leprae TN] gi|221230178|ref|YP_002503594.1| hypothetical protein MLBr_01347 [Mycobacterium leprae Br4923] gi|13093252|emb|CAC31728.1| conserved hypothetical protein [Mycobacterium leprae] gi|219933285|emb|CAR71442.1| conserved hypothetical protein [Mycobacterium leprae Br4923] Length=77 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 54/77 (71%), Positives = 62/77 (81%), Gaps = 3/77 (3%) Query 1 MLDEALLAILVCPADRGPLVLVEDG---DIQVLYNPRLRRAYRIEDGIPVLLVDEAREVD 57 MLD+ LL+ILVCPADRGPLVLV+ G Q YNPRLRRAYRI+DGIPVLLVDEAR+VD Sbjct 1 MLDDLLLSILVCPADRGPLVLVDQGYGAGGQSFYNPRLRRAYRIDDGIPVLLVDEARDVD 60 Query 58 EDEHARLMARGRPAAPQ 74 +DEHA+LM + PQ Sbjct 61 DDEHAQLMVQAPTTDPQ 77 >gi|333990482|ref|YP_004523096.1| hypothetical protein JDM601_1843 [Mycobacterium sp. JDM601] gi|333486451|gb|AEF35843.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=74 Score = 102 bits (253), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 52/74 (71%), Positives = 62/74 (84%), Gaps = 0/74 (0%) Query 1 MLDEALLAILVCPADRGPLVLVEDGDIQVLYNPRLRRAYRIEDGIPVLLVDEAREVDEDE 60 M+D+ LLAILVCPADRGPL+ V+ +VLYNPRLRRAYRIEDGIPVLL+DEA +V +DE Sbjct 1 MIDDELLAILVCPADRGPLLRVKRSADEVLYNPRLRRAYRIEDGIPVLLIDEATDVGDDE 60 Query 61 HARLMARGRPAAPQ 74 HARL+ R PA P+ Sbjct 61 HARLIGRAGPADPR 74 >gi|118617294|ref|YP_905626.1| hypothetical protein MUL_1661 [Mycobacterium ulcerans Agy99] gi|183982493|ref|YP_001850784.1| hypothetical protein MMAR_2479 [Mycobacterium marinum M] gi|118569404|gb|ABL04155.1| conserved protein [Mycobacterium ulcerans Agy99] gi|183175819|gb|ACC40929.1| conserved protein [Mycobacterium marinum M] Length=77 Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 52/72 (73%), Positives = 61/72 (85%), Gaps = 1/72 (1%) Query 1 MLDEALLAILVCPADRGPLVLVEDGD-IQVLYNPRLRRAYRIEDGIPVLLVDEAREVDED 59 MLDE LL ILVCPADRGPL+LVEDG+ ++LYNPRLRRAYRI+D IPVLL+D+AR+V +D Sbjct 1 MLDEKLLKILVCPADRGPLLLVEDGERGRLLYNPRLRRAYRIDDDIPVLLIDQARDVTDD 60 Query 60 EHARLMARGRPA 71 EHAR A G P Sbjct 61 EHARFTAAGLPT 72 >gi|226360092|ref|YP_002777870.1| hypothetical protein ROP_06780 [Rhodococcus opacus B4] gi|226238577|dbj|BAH48925.1| hypothetical protein [Rhodococcus opacus B4] Length=70 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 46/72 (64%), Positives = 56/72 (78%), Gaps = 3/72 (4%) Query 1 MLDEALLAILVCPADRGPLVLVEDGDIQVLYNPRLRRAYRIEDGIPVLLVDEAREVDEDE 60 ++D LL IL CP D+GPL+LV D ++LYNPRLRRAY IE+GIPVLL+DEAR+VD DE Sbjct 2 VIDPTLLGILACPQDKGPLLLVGD---ELLYNPRLRRAYPIENGIPVLLIDEARDVDADE 58 Query 61 HARLMARGRPAA 72 H L+AR AA Sbjct 59 HETLLARASGAA 70 >gi|118467750|ref|YP_888059.1| hypothetical protein MSMEG_3764 [Mycobacterium smegmatis str. MC2 155] gi|118169037|gb|ABK69933.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=69 Score = 87.8 bits (216), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 48/69 (70%), Positives = 56/69 (82%), Gaps = 4/69 (5%) Query 1 MLDEALLAILVCPADRGPLVLVEDGDIQVLYNPRLRRAYRIEDGIPVLLVDEAREVDED- 59 M+DE LL+ILVCP DRGPL+LV D + LYNPRLRRAYRIEDGIPVLLVDEA +++D Sbjct 1 MIDEKLLSILVCPQDRGPLLLVGD---EWLYNPRLRRAYRIEDGIPVLLVDEAVAIEDDA 57 Query 60 EHARLMARG 68 EH RL+ R Sbjct 58 EHQRLIERA 66 >gi|226306762|ref|YP_002766722.1| hypothetical protein RER_32750 [Rhodococcus erythropolis PR4] gi|229492711|ref|ZP_04386512.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] gi|226185879|dbj|BAH33983.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] gi|229320370|gb|EEN86190.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] Length=68 Score = 87.0 bits (214), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 43/67 (65%), Positives = 55/67 (83%), Gaps = 3/67 (4%) Query 2 LDEALLAILVCPADRGPLVLVEDGDIQVLYNPRLRRAYRIEDGIPVLLVDEAREVDEDEH 61 +D LL+IL CP D+GPL+LV D ++LYNPRLRRAY IE+GIPVLL+DEAR+V +DEH Sbjct 3 IDSTLLSILACPQDKGPLLLVGD---ELLYNPRLRRAYPIENGIPVLLIDEARDVADDEH 59 Query 62 ARLMARG 68 +L+AR Sbjct 60 EKLLARA 66 >gi|325674257|ref|ZP_08153946.1| hypothetical protein HMPREF0724_11728 [Rhodococcus equi ATCC 33707] gi|325554937|gb|EGD24610.1| hypothetical protein HMPREF0724_11728 [Rhodococcus equi ATCC 33707] Length=71 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 45/70 (65%), Positives = 54/70 (78%), Gaps = 3/70 (4%) Query 2 LDEALLAILVCPADRGPLVLVEDGDIQVLYNPRLRRAYRIEDGIPVLLVDEAREVDEDEH 61 +D LL+IL CP D+GPL+LV D +VLYNPRLRRAY IE+GIPVLL+DEAR+V E EH Sbjct 3 IDPTLLSILACPQDKGPLLLVGD---EVLYNPRLRRAYPIENGIPVLLIDEARDVTEAEH 59 Query 62 ARLMARGRPA 71 +ARG A Sbjct 60 EDFVARGAAA 69 >gi|145224099|ref|YP_001134777.1| hypothetical protein Mflv_3515 [Mycobacterium gilvum PYR-GCK] gi|315444436|ref|YP_004077315.1| hypothetical protein Mspyr1_28570 [Mycobacterium sp. Spyr1] gi|145216585|gb|ABP45989.1| protein of unknown function DUF343 [Mycobacterium gilvum PYR-GCK] gi|315262739|gb|ADT99480.1| uncharacterized conserved protein [Mycobacterium sp. Spyr1] Length=68 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 46/65 (71%), Positives = 53/65 (82%), Gaps = 4/65 (6%) Query 2 LDEALLAILVCPADRGPLVLVEDGDIQVLYNPRLRRAYRIEDGIPVLLVDEAREVDEDEH 61 LD+ LLAILVCP DRGPL+LV+ LYNPRL+R YRI+DGIPVLLVDEA VD+DEH Sbjct 3 LDDTLLAILVCPQDRGPLLLVD----GCLYNPRLKRKYRIDDGIPVLLVDEAVPVDDDEH 58 Query 62 ARLMA 66 RL+A Sbjct 59 RRLVA 63 >gi|319948167|ref|ZP_08022327.1| hypothetical protein ES5_02439 [Dietzia cinnamea P4] gi|319438151|gb|EFV93111.1| hypothetical protein ES5_02439 [Dietzia cinnamea P4] Length=73 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 45/74 (61%), Positives = 56/74 (76%), Gaps = 3/74 (4%) Query 1 MLDEALLAILVCPADRGPLVLVEDGDIQVLYNPRLRRAYRIEDGIPVLLVDEAREVDEDE 60 ++D LL IL CP D+GPL+LV D + LYNPRLRRAYRI+DGIPVLLVDE+R+VD+ E Sbjct 3 VIDARLLEILACPEDKGPLLLV---DGETLYNPRLRRAYRIDDGIPVLLVDESRQVDDAE 59 Query 61 HARLMARGRPAAPQ 74 H L+AR A + Sbjct 60 HTDLVARSGGAHTE 73 >gi|54023954|ref|YP_118196.1| hypothetical protein nfa19860 [Nocardia farcinica IFM 10152] gi|54015462|dbj|BAD56832.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=76 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 46/70 (66%), Positives = 55/70 (79%), Gaps = 1/70 (1%) Query 1 MLDEALLAILVCPADRGPLVLVEDG-DIQVLYNPRLRRAYRIEDGIPVLLVDEAREVDED 59 +LD LL +L CP D+GPL+LV D VLYNPRLRRAY IE+GIPVLLVDEAR+V +D Sbjct 6 VLDPTLLELLACPQDKGPLLLVRDNAGADVLYNPRLRRAYPIENGIPVLLVDEARDVADD 65 Query 60 EHARLMARGR 69 EHA L+A+ R Sbjct 66 EHAALVAQQR 75 >gi|111017961|ref|YP_700933.1| hypothetical protein RHA1_ro00947 [Rhodococcus jostii RHA1] gi|110817491|gb|ABG92775.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=70 Score = 84.3 bits (207), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 43/67 (65%), Positives = 53/67 (80%), Gaps = 3/67 (4%) Query 1 MLDEALLAILVCPADRGPLVLVEDGDIQVLYNPRLRRAYRIEDGIPVLLVDEAREVDEDE 60 ++D LL IL CP D+GPL+LV D ++LYNPRLRRAY IE+GIPVLL+DEAR+V DE Sbjct 2 VIDPTLLGILACPQDKGPLLLVGD---ELLYNPRLRRAYPIENGIPVLLIDEARDVGADE 58 Query 61 HARLMAR 67 H L+AR Sbjct 59 HETLLAR 65 >gi|108799926|ref|YP_640123.1| hypothetical protein Mmcs_2960 [Mycobacterium sp. MCS] gi|119869036|ref|YP_938988.1| hypothetical protein Mkms_3004 [Mycobacterium sp. KMS] gi|126435554|ref|YP_001071245.1| hypothetical protein Mjls_2975 [Mycobacterium sp. JLS] gi|108770345|gb|ABG09067.1| protein of unknown function DUF343 [Mycobacterium sp. MCS] gi|119695125|gb|ABL92198.1| protein of unknown function DUF343 [Mycobacterium sp. KMS] gi|126235354|gb|ABN98754.1| protein of unknown function DUF343 [Mycobacterium sp. JLS] Length=68 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 47/69 (69%), Positives = 54/69 (79%), Gaps = 4/69 (5%) Query 1 MLDEALLAILVCPADRGPLVLVEDGDIQVLYNPRLRRAYRIEDGIPVLLVDEAREVDED- 59 MLDE L AILVCP DRGPL+LV D ++LYNPRLR+ YRI+DGIPVLLVDEA V +D Sbjct 1 MLDEKLRAILVCPQDRGPLLLVGD---EMLYNPRLRQGYRIDDGIPVLLVDEAVAVTDDA 57 Query 60 EHARLMARG 68 EH RL+ R Sbjct 58 EHQRLLDRA 66 >gi|120404274|ref|YP_954103.1| hypothetical protein Mvan_3299 [Mycobacterium vanbaalenii PYR-1] gi|119957092|gb|ABM14097.1| protein of unknown function DUF343 [Mycobacterium vanbaalenii PYR-1] Length=71 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 43/65 (67%), Positives = 50/65 (77%), Gaps = 4/65 (6%) Query 2 LDEALLAILVCPADRGPLVLVEDGDIQVLYNPRLRRAYRIEDGIPVLLVDEAREVDEDEH 61 LDE L ILVCP DRGPL+ V + LYNPRLRR YRI+DGIPVLL+DEA VD+DEH Sbjct 3 LDETLRTILVCPQDRGPLLYVGES----LYNPRLRRKYRIDDGIPVLLIDEAVAVDDDEH 58 Query 62 ARLMA 66 RL++ Sbjct 59 RRLLS 63 >gi|333919186|ref|YP_004492767.1| hypothetical protein AS9A_1515 [Amycolicicoccus subflavus DQS3-9A1] gi|333481407|gb|AEF39967.1| hypothetical protein AS9A_1515 [Amycolicicoccus subflavus DQS3-9A1] Length=72 Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 41/69 (60%), Positives = 51/69 (74%), Gaps = 3/69 (4%) Query 1 MLDEALLAILVCPADRGPLVLVEDGDIQVLYNPRLRRAYRIEDGIPVLLVDEAREVDEDE 60 LD LL++L CP D GPL+L++D +VLYNPRLRRAY IE+GIPVLL+DEAREV + E Sbjct 2 TLDPILLSVLACPQDHGPLLLIDD---EVLYNPRLRRAYPIENGIPVLLIDEAREVSDSE 58 Query 61 HARLMARGR 69 H R + Sbjct 59 HQAFTERAQ 67 >gi|296140092|ref|YP_003647335.1| hypothetical protein Tpau_2390 [Tsukamurella paurometabola DSM 20162] gi|296028226|gb|ADG78996.1| protein of unknown function DUF343 [Tsukamurella paurometabola DSM 20162] Length=71 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 39/67 (59%), Positives = 50/67 (75%), Gaps = 3/67 (4%) Query 2 LDEALLAILVCPADRGPLVLVEDGDIQVLYNPRLRRAYRIEDGIPVLLVDEAREVDEDEH 61 +D LL IL CP D+GPL+ V D ++ YNPRLRRAY IEDG+PVLL+ EAR+VD+ EH Sbjct 6 IDATLLKILACPQDKGPLLYVPD---ELFYNPRLRRAYPIEDGLPVLLITEARDVDDAEH 62 Query 62 ARLMARG 68 ++AR Sbjct 63 ESILARA 69 >gi|317507373|ref|ZP_07965108.1| hypothetical protein HMPREF9336_01480 [Segniliparus rugosus ATCC BAA-974] gi|316254321|gb|EFV13656.1| hypothetical protein HMPREF9336_01480 [Segniliparus rugosus ATCC BAA-974] Length=68 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 37/68 (55%), Positives = 48/68 (71%), Gaps = 3/68 (4%) Query 2 LDEALLAILVCPADRGPLVLVEDGDIQVLYNPRLRRAYRIEDGIPVLLVDEAREVDEDEH 61 +D LL IL CP D GPL+ V D ++LYNPRLR AY +E+G+PVLL D AR VDE EH Sbjct 3 IDAKLLEILACPQDHGPLLYVAD---ELLYNPRLRVAYPVENGLPVLLADHARAVDEAEH 59 Query 62 ARLMARGR 69 +++A + Sbjct 60 EKILATAQ 67 >gi|296393965|ref|YP_003658849.1| hypothetical protein Srot_1556 [Segniliparus rotundus DSM 44985] gi|296181112|gb|ADG98018.1| protein of unknown function DUF343 [Segniliparus rotundus DSM 44985] Length=68 Score = 70.9 bits (172), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 37/68 (55%), Positives = 46/68 (68%), Gaps = 3/68 (4%) Query 2 LDEALLAILVCPADRGPLVLVEDGDIQVLYNPRLRRAYRIEDGIPVLLVDEAREVDEDEH 61 +D LL IL CP D GPL+ V D ++LYNPRL+ AY IE G+PVLL D AR VD EH Sbjct 3 IDAKLLEILACPQDHGPLLYVPD---ELLYNPRLKVAYPIEAGLPVLLADHARPVDGAEH 59 Query 62 ARLMARGR 69 R++A + Sbjct 60 ERILASAQ 67 >gi|262202731|ref|YP_003273939.1| hypothetical protein Gbro_2832 [Gordonia bronchialis DSM 43247] gi|262086078|gb|ACY22046.1| protein of unknown function DUF343 [Gordonia bronchialis DSM 43247] Length=71 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 37/60 (62%), Positives = 41/60 (69%), Gaps = 5/60 (8%) Query 10 LVCPADRGPLVLVEDGDIQVLYNPRLRRAYRIE-DGIPVLLVDEAREVDEDEHARLMARG 68 LVCP D GPL+ D LYNPRLR AYRI+ DGIPV+L DEAR VD+ EH R A G Sbjct 16 LVCPQDHGPLLDAGDE----LYNPRLRVAYRIDADGIPVMLADEARTVDDAEHERFTANG 71 >gi|239985948|ref|ZP_04706612.1| hypothetical protein SrosN1_01442 [Streptomyces roseosporus NRRL 11379] gi|291442890|ref|ZP_06582280.1| conserved hypothetical protein [Streptomyces roseosporus NRRL 15998] gi|291345837|gb|EFE72741.1| conserved hypothetical protein [Streptomyces roseosporus NRRL 15998] Length=72 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 34/70 (49%), Positives = 47/70 (68%), Gaps = 2/70 (2%) Query 3 DEALLAILVCPADRGPLVLVEDGDIQVLYNPRLRRAYRIEDGIPVLLVDEAREVDEDEHA 62 D+ LL IL CP D+GPL L+ + + LYNPRLR +Y I DGIP LL R+V+ ++H Sbjct 4 DDPLLTILACPLDKGPLSLLPEE--EALYNPRLRLSYPIVDGIPQLLPSSGRKVEAEDHE 61 Query 63 RLMARGRPAA 72 RL+ R + +A Sbjct 62 RLLTRLKASA 71 >gi|29832274|ref|NP_826908.1| hypothetical protein SAV_5731 [Streptomyces avermitilis MA-4680] gi|29609393|dbj|BAC73443.1| hypothetical protein [Streptomyces avermitilis MA-4680] Length=73 Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 38/70 (55%), Positives = 44/70 (63%), Gaps = 2/70 (2%) Query 3 DEALLAILVCPADRGPL-VLVEDGDIQ-VLYNPRLRRAYRIEDGIPVLLVDEAREVDEDE 60 D+ LL IL CP D+GPL +LV D + VLYNPRL R Y I DGIP LL +V EDE Sbjct 4 DDPLLKILACPLDKGPLHLLVPDSEKDGVLYNPRLHRRYPIVDGIPQLLPSSGEQVTEDE 63 Query 61 HARLMARGRP 70 H L+ R P Sbjct 64 HEELLRRMTP 73 >gi|297199453|ref|ZP_06916850.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083] gi|197713007|gb|EDY57041.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083] Length=69 Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 35/68 (52%), Positives = 41/68 (61%), Gaps = 2/68 (2%) Query 3 DEALLAILVCPADRGPLVLVEDGDIQVLYNPRLRRAYRIEDGIPVLLVDEAREVDEDEHA 62 D+ LL IL CP D+GPL LV + LYNPRL R Y I DGIP LL +V +DEH Sbjct 4 DDPLLQILACPLDKGPLHLVPPD--EALYNPRLHRRYPIVDGIPQLLPSSGEQVTDDEHE 61 Query 63 RLMARGRP 70 L+ R P Sbjct 62 DLLKRMTP 69 >gi|343928297|ref|ZP_08767749.1| hypothetical protein GOALK_113_00020 [Gordonia alkanivorans NBRC 16433] gi|343761767|dbj|GAA14675.1| hypothetical protein GOALK_113_00020 [Gordonia alkanivorans NBRC 16433] Length=71 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 34/58 (59%), Positives = 42/58 (73%), Gaps = 5/58 (8%) Query 10 LVCPADRGPLVLVEDGDIQVLYNPRLRRAYRIE-DGIPVLLVDEAREVDEDEHARLMA 66 L CP D GPL+ D LYNPRL AYRI+ DGIPV+L+DEAR+VD+ EH RL++ Sbjct 16 LACPQDHGPLINAGDE----LYNPRLHVAYRIDADGIPVMLIDEARKVDDAEHERLVS 69 >gi|294816165|ref|ZP_06774808.1| Trm112p domain-containing protein [Streptomyces clavuligerus ATCC 27064] gi|326444499|ref|ZP_08219233.1| hypothetical protein SclaA2_25696 [Streptomyces clavuligerus ATCC 27064] gi|294328764|gb|EFG10407.1| Trm112p domain-containing protein [Streptomyces clavuligerus ATCC 27064] Length=73 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 34/67 (51%), Positives = 39/67 (59%), Gaps = 2/67 (2%) Query 6 LLAILVCPADRGPL--VLVEDGDIQVLYNPRLRRAYRIEDGIPVLLVDEAREVDEDEHAR 63 LLA LVCP D+GPL VL ++ LYNPRLRR Y I G+P LL V EH R Sbjct 7 LLAFLVCPLDKGPLRPVLSGTASVEALYNPRLRRLYPIVGGVPRLLPASGAPVSAGEHER 66 Query 64 LMARGRP 70 L +G P Sbjct 67 LTRQGAP 73 >gi|290960729|ref|YP_003491911.1| hypothetical protein SCAB_63621 [Streptomyces scabiei 87.22] gi|260650255|emb|CBG73371.1| conserved hypothetical protein [Streptomyces scabiei 87.22] Length=85 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 37/74 (50%), Positives = 44/74 (60%), Gaps = 10/74 (13%) Query 3 DEALLAILVCPADRGPLVLV---EDGDI-------QVLYNPRLRRAYRIEDGIPVLLVDE 52 D+ LL IL CP D+GPL LV E+G+ + LYNPRL R Y I DGIP LL Sbjct 4 DDPLLQILACPLDKGPLHLVVHEEEGEPTGATGAPESLYNPRLHRRYPIVDGIPQLLPSS 63 Query 53 AREVDEDEHARLMA 66 +V EDEH +L A Sbjct 64 GEQVTEDEHEKLSA 77 >gi|302545681|ref|ZP_07298023.1| conserved hypothetical protein [Streptomyces hygroscopicus ATCC 53653] gi|302463299|gb|EFL26392.1| conserved hypothetical protein [Streptomyces himastatinicus ATCC 53653] Length=69 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 34/68 (50%), Positives = 41/68 (61%), Gaps = 2/68 (2%) Query 3 DEALLAILVCPADRGPLVLVEDGDIQVLYNPRLRRAYRIEDGIPVLLVDEAREVDEDEHA 62 D+ +L IL CP D+GPL L+ D LYNPRLRR Y I DG+P LL V ++EH Sbjct 4 DDPILKILACPLDKGPLTLLLPED--ALYNPRLRRRYPIVDGVPQLLPSSGERVPDEEHE 61 Query 63 RLMARGRP 70 RL R P Sbjct 62 RLTKRLTP 69 >gi|297195807|ref|ZP_06913205.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC 25486] gi|197720745|gb|EDY64653.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC 25486] Length=69 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 32/63 (51%), Positives = 41/63 (66%), Gaps = 2/63 (3%) Query 3 DEALLAILVCPADRGPLVLVEDGDIQVLYNPRLRRAYRIEDGIPVLLVDEAREVDEDEHA 62 D+ LL IL CP D+GPL L+ + +I LYNPRL+ +Y I DGIP LL V ED+HA Sbjct 4 DDPLLRILACPLDKGPLTLLSEQNI--LYNPRLQLSYPIVDGIPQLLPSSGSRVTEDDHA 61 Query 63 RLM 65 + Sbjct 62 TYL 64 >gi|256372530|ref|YP_003110354.1| hypothetical protein Afer_1767 [Acidimicrobium ferrooxidans DSM 10331] gi|256009114|gb|ACU54681.1| protein of unknown function DUF343 [Acidimicrobium ferrooxidans DSM 10331] Length=89 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 35/64 (55%), Positives = 44/64 (69%), Gaps = 3/64 (4%) Query 6 LLAILVCPADRGPLVLVEDGDIQVLYNPRLRRAYRIEDGIPVLLVDEAREVDEDEH-ARL 64 LLAI+ CP D GPL+ +E VLYNPRL RAY + DGI LLV++A VD++ H A L Sbjct 8 LLAIVACPLDHGPLLWIESE--SVLYNPRLHRAYAVTDGIADLLVEDAEVVDDERHRALL 65 Query 65 MARG 68 +A G Sbjct 66 VAAG 69 >gi|302551178|ref|ZP_07303520.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM 40736] gi|302468796|gb|EFL31889.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM 40736] Length=73 Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 34/70 (49%), Positives = 42/70 (60%), Gaps = 2/70 (2%) Query 3 DEALLAILVCPADRGPLVLVEDGDIQ--VLYNPRLRRAYRIEDGIPVLLVDEAREVDEDE 60 D+ LL IL CP D+GPL L+ Q LYNPRL+R Y I DGIP LL +V ++E Sbjct 4 DDPLLKILACPLDKGPLRLLAQTTEQEEALYNPRLQRRYPIVDGIPQLLPSSGEQVPDEE 63 Query 61 HARLMARGRP 70 H L+ R P Sbjct 64 HEELLKRMAP 73 >gi|296119700|ref|ZP_06838258.1| tetraacyldisaccharide 4'-kinase [Corynebacterium ammoniagenes DSM 20306] gi|295967583|gb|EFG80850.1| tetraacyldisaccharide 4'-kinase [Corynebacterium ammoniagenes DSM 20306] Length=59 Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 34/53 (65%), Positives = 40/53 (76%), Gaps = 2/53 (3%) Query 2 LDEALLAILVCPADRGPLVLVEDGDIQVLYNPRLRRAYRIEDGIPVLLVDEAR 54 LD AL+ ILVCP D+GPL +ED QVL N RL AY IEDGIPV+LVD+A+ Sbjct 3 LDPALVEILVCPQDKGPLSYLEDE--QVLVNERLGIAYPIEDGIPVMLVDDAK 53 >gi|227505063|ref|ZP_03935112.1| conserved hypothetical protein [Corynebacterium striatum ATCC 6940] gi|227198351|gb|EEI78399.1| conserved hypothetical protein [Corynebacterium striatum ATCC 6940] Length=66 Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 33/53 (63%), Positives = 38/53 (72%), Gaps = 2/53 (3%) Query 2 LDEALLAILVCPADRGPLVLVEDGDIQVLYNPRLRRAYRIEDGIPVLLVDEAR 54 LD LL ILVCP D+GPL +ED +VL N RL AY IEDGIPV+LVD A+ Sbjct 6 LDPQLLEILVCPQDKGPLTYIEDK--EVLVNERLGVAYPIEDGIPVMLVDHAQ 56 >gi|213966315|ref|ZP_03394497.1| tetraacyldisaccharide 4'-kinase [Corynebacterium amycolatum SK46] gi|213951021|gb|EEB62421.1| tetraacyldisaccharide 4'-kinase [Corynebacterium amycolatum SK46] Length=57 Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 34/57 (60%), Positives = 41/57 (72%), Gaps = 2/57 (3%) Query 2 LDEALLAILVCPADRGPLVLVEDGDIQVLYNPRLRRAYRIEDGIPVLLVDEAREVDE 58 LD LL IL CP D+GPL +ED QVL NPRL+ AYRI++GIPV+L DEA D+ Sbjct 3 LDPKLLDILACPRDKGPLEYLEDE--QVLVNPRLKIAYRIDEGIPVMLSDEAIAWDK 57 >gi|291439822|ref|ZP_06579212.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] gi|291342717|gb|EFE69673.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] Length=101 Score = 60.8 bits (146), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 37/86 (44%), Positives = 46/86 (54%), Gaps = 14/86 (16%) Query 3 DEALLAILVCPADRGPLVLV--------EDGDI------QVLYNPRLRRAYRIEDGIPVL 48 D+ LL IL CP D+GPL L+ E+G LYNPRLRR Y I DGIP L Sbjct 4 DDPLLRILACPLDKGPLHLLPPAPGADREEGTGGRAAREASLYNPRLRRRYPIVDGIPQL 63 Query 49 LVDEAREVDEDEHARLMARGRPAAPQ 74 L +V ++EH +L+ R P P Sbjct 64 LPSSGEQVPDEEHEKLLTRMSPTPPS 89 >gi|146386932|pdb|2JNY|A Chain A, Solution Nmr Structure Of Protein Uncharacterized Bcr, Northeast Structural Genomics Consortium Target Cgr1 Length=67 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 32/54 (60%), Positives = 38/54 (71%), Gaps = 2/54 (3%) Query 2 LDEALLAILVCPADRGPLVLVEDGDIQVLYNPRLRRAYRIEDGIPVLLVDEARE 55 LD LL +L CP D+GPL +E Q+L N RL AYRI+DGIPVLL+DEA E Sbjct 3 LDPQLLEVLACPKDKGPLRYLESE--QLLVNERLNLAYRIDDGIPVLLIDEATE 54 >gi|19552622|ref|NP_600624.1| hypothetical protein NCgl1351 [Corynebacterium glutamicum ATCC 13032] gi|62390290|ref|YP_225692.1| hypothetical protein cg1592 [Corynebacterium glutamicum ATCC 13032] gi|21324173|dbj|BAB98798.1| Uncharacterized BCR [Corynebacterium glutamicum ATCC 13032] gi|41325627|emb|CAF21416.1| conserved hypothetical protein [Corynebacterium glutamicum ATCC 13032] Length=59 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 32/54 (60%), Positives = 38/54 (71%), Gaps = 2/54 (3%) Query 2 LDEALLAILVCPADRGPLVLVEDGDIQVLYNPRLRRAYRIEDGIPVLLVDEARE 55 LD LL +L CP D+GPL +E Q+L N RL AYRI+DGIPVLL+DEA E Sbjct 3 LDPQLLEVLACPKDKGPLRYLESE--QLLVNERLNLAYRIDDGIPVLLIDEATE 54 >gi|300781254|ref|ZP_07091108.1| tetraacyldisaccharide 4'-kinase [Corynebacterium genitalium ATCC 33030] gi|300532961|gb|EFK54022.1| tetraacyldisaccharide 4'-kinase [Corynebacterium genitalium ATCC 33030] Length=66 Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 31/53 (59%), Positives = 39/53 (74%), Gaps = 2/53 (3%) Query 2 LDEALLAILVCPADRGPLVLVEDGDIQVLYNPRLRRAYRIEDGIPVLLVDEAR 54 LD LL +L CP D+GPL D + Q+L NPR+ AYRI+DGIPVLL+DEA+ Sbjct 8 LDPQLLEVLACPQDKGPLDY--DHEEQLLINPRMGIAYRIDDGIPVLLIDEAQ 58 >gi|259505647|ref|ZP_05748549.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] gi|259166778|gb|EEW51332.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] Length=62 Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 32/54 (60%), Positives = 38/54 (71%), Gaps = 2/54 (3%) Query 2 LDEALLAILVCPADRGPLVLVEDGDIQVLYNPRLRRAYRIEDGIPVLLVDEARE 55 LD LL +L CP D+GPL +E Q+L N RL AYRI+DGIPVLL+DEA E Sbjct 6 LDPKLLEVLACPKDKGPLRYLESE--QLLVNERLGLAYRIDDGIPVLLIDEATE 57 >gi|25028095|ref|NP_738149.1| hypothetical protein CE1539 [Corynebacterium efficiens YS-314] gi|23493379|dbj|BAC18349.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] Length=69 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 32/54 (60%), Positives = 38/54 (71%), Gaps = 2/54 (3%) Query 2 LDEALLAILVCPADRGPLVLVEDGDIQVLYNPRLRRAYRIEDGIPVLLVDEARE 55 LD LL +L CP D+GPL +E Q+L N RL AYRI+DGIPVLL+DEA E Sbjct 13 LDPKLLEVLACPKDKGPLRYLESE--QLLVNERLGLAYRIDDGIPVLLIDEATE 64 >gi|145295539|ref|YP_001138360.1| hypothetical protein cgR_1467 [Corynebacterium glutamicum R] gi|140845459|dbj|BAF54458.1| hypothetical protein [Corynebacterium glutamicum R] gi|344043391|gb|EGV39084.1| hypothetical protein CgS9114_14432 [Corynebacterium glutamicum S9114] Length=59 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 31/54 (58%), Positives = 38/54 (71%), Gaps = 2/54 (3%) Query 2 LDEALLAILVCPADRGPLVLVEDGDIQVLYNPRLRRAYRIEDGIPVLLVDEARE 55 LD LL +L CP D+GPL ++ Q+L N RL AYRI+DGIPVLL+DEA E Sbjct 3 LDPQLLEVLACPKDKGPLRYLKSE--QLLVNERLNLAYRIDDGIPVLLIDEATE 54 >gi|311740482|ref|ZP_07714309.1| tetraacyldisaccharide 4'-kinase [Corynebacterium pseudogenitalium ATCC 33035] gi|311304002|gb|EFQ80078.1| tetraacyldisaccharide 4'-kinase [Corynebacterium pseudogenitalium ATCC 33035] Length=57 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 32/54 (60%), Positives = 38/54 (71%), Gaps = 2/54 (3%) Query 2 LDEALLAILVCPADRGPLVLVEDGDIQVLYNPRLRRAYRIEDGIPVLLVDEARE 55 LD LL +LVCP D+GPL +ED QVL N RL AY IED IPV+LVD A++ Sbjct 3 LDPKLLEVLVCPQDKGPLTYLEDK--QVLVNERLGIAYPIEDDIPVMLVDHAQK 54 >gi|227548149|ref|ZP_03978198.1| conserved hypothetical protein [Corynebacterium lipophiloflavum DSM 44291] gi|227079811|gb|EEI17774.1| conserved hypothetical protein [Corynebacterium lipophiloflavum DSM 44291] Length=61 Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 32/53 (61%), Positives = 38/53 (72%), Gaps = 2/53 (3%) Query 2 LDEALLAILVCPADRGPLVLVEDGDIQVLYNPRLRRAYRIEDGIPVLLVDEAR 54 LD LL +L CP D+GPLV E Q+L N RL AYRI+DGIPVLL+DEA+ Sbjct 6 LDPKLLDVLACPQDKGPLVFNEAE--QLLINERLGIAYRIDDGIPVLLIDEAQ 56 >gi|225022591|ref|ZP_03711783.1| hypothetical protein CORMATOL_02633 [Corynebacterium matruchotii ATCC 33806] gi|224944499|gb|EEG25708.1| hypothetical protein CORMATOL_02633 [Corynebacterium matruchotii ATCC 33806] Length=59 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 30/52 (58%), Positives = 36/52 (70%), Gaps = 2/52 (3%) Query 2 LDEALLAILVCPADRGPLVLVEDGDIQVLYNPRLRRAYRIEDGIPVLLVDEA 53 LD LL +L CP D GPL +ED + VL NPRL+ AY I D IPV+L+DEA Sbjct 3 LDPQLLEVLACPQDHGPLTYLEDKN--VLVNPRLKIAYPIVDDIPVMLIDEA 52 >gi|305682028|ref|ZP_07404832.1| conserved hypothetical protein [Corynebacterium matruchotii ATCC 14266] gi|305658501|gb|EFM48004.1| conserved hypothetical protein [Corynebacterium matruchotii ATCC 14266] Length=59 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 30/53 (57%), Positives = 36/53 (68%), Gaps = 2/53 (3%) Query 2 LDEALLAILVCPADRGPLVLVEDGDIQVLYNPRLRRAYRIEDGIPVLLVDEAR 54 LD LL +L CP D GPL +ED + VL NPRL+ AY I D IPV+L+DEA Sbjct 3 LDPQLLEVLACPQDHGPLTYLEDKN--VLVNPRLKIAYPIIDDIPVMLIDEAT 53 Lambda K H 0.323 0.143 0.416 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 131500792262 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40