BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1686c
Length=226
Score E
Sequences producing significant alignments: (Bits) Value
gi|308231904|ref|ZP_07414208.2| conserved membrane protein [Myco... 446 9e-124
gi|308369501|ref|ZP_07418026.2| conserved membrane protein [Myco... 446 1e-123
gi|15608824|ref|NP_216202.1| integral membrane protein ABC trans... 444 3e-123
gi|31792872|ref|NP_855365.1| integral membrane protein ABC trans... 442 2e-122
gi|240170133|ref|ZP_04748792.1| ABC-2 type transport system perm... 379 3e-103
gi|183982499|ref|YP_001850790.1| antibiotic resistance ABC trans... 371 4e-101
gi|118464599|ref|YP_882270.1| efflux ABC transporter [Mycobacter... 365 3e-99
gi|254819732|ref|ZP_05224733.1| ABC transporter efflux protein, ... 364 7e-99
gi|118617297|ref|YP_905629.1| antibiotic resistance ABC transpor... 362 2e-98
gi|41407490|ref|NP_960326.1| hypothetical protein MAP1392c [Myco... 354 4e-96
gi|254775538|ref|ZP_05217054.1| ABC transporter efflux protein, ... 353 1e-95
gi|342860737|ref|ZP_08717387.1| efflux ABC transporter [Mycobact... 351 4e-95
gi|296164583|ref|ZP_06847151.1| antibiotic resistance ABC superf... 348 3e-94
gi|333990484|ref|YP_004523098.1| antibiotic resistance ABC trans... 348 4e-94
gi|120404272|ref|YP_954101.1| multidrug ABC transporter inner me... 335 4e-90
gi|126435552|ref|YP_001071243.1| multidrug ABC transporter inner... 327 1e-87
gi|118472419|ref|YP_888057.1| ABC transporter [Mycobacterium sme... 322 2e-86
gi|108799924|ref|YP_640121.1| ABC transporter efflux protein Drr... 314 7e-84
gi|312139864|ref|YP_004007200.1| ABC transporter transmembrane p... 270 1e-70
gi|111017959|ref|YP_700931.1| ABC transporter permease [Rhodococ... 248 4e-64
gi|226360090|ref|YP_002777868.1| ABC transporter permease protei... 244 7e-63
gi|54023956|ref|YP_118198.1| putative transporter [Nocardia farc... 241 7e-62
gi|325962796|ref|YP_004240702.1| ABC transporter efflux protein,... 238 5e-61
gi|226306760|ref|YP_002766720.1| ABC transporter permease protei... 231 8e-59
gi|302868883|ref|YP_003837520.1| drug efflux ABC transporter inn... 226 2e-57
gi|119964004|ref|YP_947317.1| DrrB family ABC transporter [Arthr... 225 4e-57
gi|330469256|ref|YP_004406999.1| ABC drug efflux pump, inner mem... 214 6e-54
gi|239988636|ref|ZP_04709300.1| putative ABC transporter permeas... 199 2e-49
gi|119714743|ref|YP_921708.1| ABC transporter [Nocardioides sp. ... 198 5e-49
gi|296140096|ref|YP_003647339.1| multidrug ABC transporter inner... 197 8e-49
gi|145595693|ref|YP_001159990.1| multidrug ABC transporter inner... 196 2e-48
gi|320010102|gb|ADW04952.1| ABC-2 type transporter [Streptomyces... 194 1e-47
gi|328883246|emb|CCA56485.1| putative ABC transporter permease p... 194 1e-47
gi|182437933|ref|YP_001825652.1| putative ABC transporter permea... 192 2e-47
gi|159038943|ref|YP_001538196.1| multidrug ABC transporter inner... 190 2e-46
gi|297192884|ref|ZP_06910282.1| ABC transporter permease [Strept... 187 1e-45
gi|258650825|ref|YP_003199981.1| ABC transporter [Nakamurella mu... 186 2e-45
gi|29831266|ref|NP_825900.1| ABC transporter permease [Streptomy... 186 2e-45
gi|302553221|ref|ZP_07305563.1| ABC transporter [Streptomyces vi... 185 4e-45
gi|302559247|ref|ZP_07311589.1| DrrB family ABC transporter effl... 184 1e-44
gi|302529848|ref|ZP_07282190.1| hypothetical protein SSMG_06230 ... 183 1e-44
gi|297201459|ref|ZP_06918856.1| ABC transporter permease [Strept... 181 6e-44
gi|290958372|ref|YP_003489554.1| ABC transporter [Streptomyces s... 181 8e-44
gi|256394707|ref|YP_003116271.1| ABC transporter [Catenulispora ... 181 9e-44
gi|333921260|ref|YP_004494841.1| putative ABC transporter efflux... 179 2e-43
gi|229822111|ref|YP_002883637.1| ABC-2 type transporter [Beutenb... 179 2e-43
gi|145295590|ref|YP_001138411.1| hypothetical protein cgR_1517 [... 178 6e-43
gi|326328726|ref|ZP_08195064.1| ABC transporter efflux protein, ... 178 6e-43
gi|325068585|ref|ZP_08127258.1| DrrB family ABC transporter [Act... 177 8e-43
gi|19552671|ref|NP_600673.1| ABC-type transporter, permease comp... 177 1e-42
>gi|308231904|ref|ZP_07414208.2| conserved membrane protein [Mycobacterium tuberculosis SUMu001]
gi|308215623|gb|EFO75022.1| conserved membrane protein [Mycobacterium tuberculosis SUMu001]
Length=273
Score = 446 bits (1148), Expect = 9e-124, Method: Compositional matrix adjust.
Identities = 226/226 (100%), Positives = 226/226 (100%), Gaps = 0/226 (0%)
Query 1 MILLVPILIITLMYFMFENVPHRPGTPSGFNTACLVLLGLFPLFVMFVITAITMQRERAS 60
MILLVPILIITLMYFMFENVPHRPGTPSGFNTACLVLLGLFPLFVMFVITAITMQRERAS
Sbjct 48 MILLVPILIITLMYFMFENVPHRPGTPSGFNTACLVLLGLFPLFVMFVITAITMQRERAS 107
Query 61 GTLERILTTPLRRLDLLAGYGTAFSIAAAAQATLACIVAFWFLGFDTAGSPVWVFAIAIV 120
GTLERILTTPLRRLDLLAGYGTAFSIAAAAQATLACIVAFWFLGFDTAGSPVWVFAIAIV
Sbjct 108 GTLERILTTPLRRLDLLAGYGTAFSIAAAAQATLACIVAFWFLGFDTAGSPVWVFAIAIV 167
Query 121 NAVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMPTWLEWISNVMPAS 180
NAVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMPTWLEWISNVMPAS
Sbjct 168 NAVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMPTWLEWISNVMPAS 227
Query 181 YALEALQQVGAHPELTGIAVRDVVVVLSFAVASLCLAAVTLRRRTS 226
YALEALQQVGAHPELTGIAVRDVVVVLSFAVASLCLAAVTLRRRTS
Sbjct 228 YALEALQQVGAHPELTGIAVRDVVVVLSFAVASLCLAAVTLRRRTS 273
>gi|308369501|ref|ZP_07418026.2| conserved membrane protein [Mycobacterium tuberculosis SUMu002]
gi|308370794|ref|ZP_07422744.2| conserved membrane protein [Mycobacterium tuberculosis SUMu003]
gi|308372031|ref|ZP_07427111.2| conserved membrane protein [Mycobacterium tuberculosis SUMu004]
13 more sequence titles
Length=249
Score = 446 bits (1146), Expect = 1e-123, Method: Compositional matrix adjust.
Identities = 226/226 (100%), Positives = 226/226 (100%), Gaps = 0/226 (0%)
Query 1 MILLVPILIITLMYFMFENVPHRPGTPSGFNTACLVLLGLFPLFVMFVITAITMQRERAS 60
MILLVPILIITLMYFMFENVPHRPGTPSGFNTACLVLLGLFPLFVMFVITAITMQRERAS
Sbjct 24 MILLVPILIITLMYFMFENVPHRPGTPSGFNTACLVLLGLFPLFVMFVITAITMQRERAS 83
Query 61 GTLERILTTPLRRLDLLAGYGTAFSIAAAAQATLACIVAFWFLGFDTAGSPVWVFAIAIV 120
GTLERILTTPLRRLDLLAGYGTAFSIAAAAQATLACIVAFWFLGFDTAGSPVWVFAIAIV
Sbjct 84 GTLERILTTPLRRLDLLAGYGTAFSIAAAAQATLACIVAFWFLGFDTAGSPVWVFAIAIV 143
Query 121 NAVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMPTWLEWISNVMPAS 180
NAVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMPTWLEWISNVMPAS
Sbjct 144 NAVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMPTWLEWISNVMPAS 203
Query 181 YALEALQQVGAHPELTGIAVRDVVVVLSFAVASLCLAAVTLRRRTS 226
YALEALQQVGAHPELTGIAVRDVVVVLSFAVASLCLAAVTLRRRTS
Sbjct 204 YALEALQQVGAHPELTGIAVRDVVVVLSFAVASLCLAAVTLRRRTS 249
>gi|15608824|ref|NP_216202.1| integral membrane protein ABC transporter [Mycobacterium tuberculosis
H37Rv]
gi|15841143|ref|NP_336180.1| antibiotic resistance ABC transporter, efflux protein [Mycobacterium
tuberculosis CDC1551]
gi|148661483|ref|YP_001283006.1| multidrug resistance ABC transporter permease protein [Mycobacterium
tuberculosis H37Ra]
51 more sequence titles
Length=226
Score = 444 bits (1143), Expect = 3e-123, Method: Compositional matrix adjust.
Identities = 226/226 (100%), Positives = 226/226 (100%), Gaps = 0/226 (0%)
Query 1 MILLVPILIITLMYFMFENVPHRPGTPSGFNTACLVLLGLFPLFVMFVITAITMQRERAS 60
MILLVPILIITLMYFMFENVPHRPGTPSGFNTACLVLLGLFPLFVMFVITAITMQRERAS
Sbjct 1 MILLVPILIITLMYFMFENVPHRPGTPSGFNTACLVLLGLFPLFVMFVITAITMQRERAS 60
Query 61 GTLERILTTPLRRLDLLAGYGTAFSIAAAAQATLACIVAFWFLGFDTAGSPVWVFAIAIV 120
GTLERILTTPLRRLDLLAGYGTAFSIAAAAQATLACIVAFWFLGFDTAGSPVWVFAIAIV
Sbjct 61 GTLERILTTPLRRLDLLAGYGTAFSIAAAAQATLACIVAFWFLGFDTAGSPVWVFAIAIV 120
Query 121 NAVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMPTWLEWISNVMPAS 180
NAVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMPTWLEWISNVMPAS
Sbjct 121 NAVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMPTWLEWISNVMPAS 180
Query 181 YALEALQQVGAHPELTGIAVRDVVVVLSFAVASLCLAAVTLRRRTS 226
YALEALQQVGAHPELTGIAVRDVVVVLSFAVASLCLAAVTLRRRTS
Sbjct 181 YALEALQQVGAHPELTGIAVRDVVVVLSFAVASLCLAAVTLRRRTS 226
>gi|31792872|ref|NP_855365.1| integral membrane protein ABC transporter [Mycobacterium bovis
AF2122/97]
gi|121637593|ref|YP_977816.1| putative integral membrane protein ABC transporter [Mycobacterium
bovis BCG str. Pasteur 1173P2]
gi|224990068|ref|YP_002644755.1| putative integral membrane protein ABC transporter [Mycobacterium
bovis BCG str. Tokyo 172]
8 more sequence titles
Length=226
Score = 442 bits (1137), Expect = 2e-122, Method: Compositional matrix adjust.
Identities = 225/226 (99%), Positives = 225/226 (99%), Gaps = 0/226 (0%)
Query 1 MILLVPILIITLMYFMFENVPHRPGTPSGFNTACLVLLGLFPLFVMFVITAITMQRERAS 60
MILLVPILIITLMYFMFEN PHRPGTPSGFNTACLVLLGLFPLFVMFVITAITMQRERAS
Sbjct 1 MILLVPILIITLMYFMFENFPHRPGTPSGFNTACLVLLGLFPLFVMFVITAITMQRERAS 60
Query 61 GTLERILTTPLRRLDLLAGYGTAFSIAAAAQATLACIVAFWFLGFDTAGSPVWVFAIAIV 120
GTLERILTTPLRRLDLLAGYGTAFSIAAAAQATLACIVAFWFLGFDTAGSPVWVFAIAIV
Sbjct 61 GTLERILTTPLRRLDLLAGYGTAFSIAAAAQATLACIVAFWFLGFDTAGSPVWVFAIAIV 120
Query 121 NAVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMPTWLEWISNVMPAS 180
NAVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMPTWLEWISNVMPAS
Sbjct 121 NAVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMPTWLEWISNVMPAS 180
Query 181 YALEALQQVGAHPELTGIAVRDVVVVLSFAVASLCLAAVTLRRRTS 226
YALEALQQVGAHPELTGIAVRDVVVVLSFAVASLCLAAVTLRRRTS
Sbjct 181 YALEALQQVGAHPELTGIAVRDVVVVLSFAVASLCLAAVTLRRRTS 226
>gi|240170133|ref|ZP_04748792.1| ABC-2 type transport system permease protein [Mycobacterium kansasii
ATCC 12478]
Length=226
Score = 379 bits (972), Expect = 3e-103, Method: Compositional matrix adjust.
Identities = 198/225 (88%), Positives = 209/225 (93%), Gaps = 0/225 (0%)
Query 1 MILLVPILIITLMYFMFENVPHRPGTPSGFNTACLVLLGLFPLFVMFVITAITMQRERAS 60
MILLVP+L+ITLMYFMF+ VP RPG PSGF+TAC+VLLGLFPLFVMFVITAITMQRERAS
Sbjct 1 MILLVPVLVITLMYFMFDKVPPRPGAPSGFDTACMVLLGLFPLFVMFVITAITMQRERAS 60
Query 61 GTLERILTTPLRRLDLLAGYGTAFSIAAAAQATLACIVAFWFLGFDTAGSPVWVFAIAIV 120
GTLERILTTPLRR+DLLAGYGTAFSIAAAAQATLAC+VAFWFLGFDTAGSP WVF IAIV
Sbjct 61 GTLERILTTPLRRIDLLAGYGTAFSIAAAAQATLACMVAFWFLGFDTAGSPAWVFVIAIV 120
Query 121 NAVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMPTWLEWISNVMPAS 180
NA LGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMP WL+W+SN MPAS
Sbjct 121 NATLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMPAWLQWLSNAMPAS 180
Query 181 YALEALQQVGAHPELTGIAVRDVVVVLSFAVASLCLAAVTLRRRT 225
YALEALQQV AH ELT VRD+VVVL FA+ SL LAAVTLRRRT
Sbjct 181 YALEALQQVSAHSELTYTTVRDIVVVLGFAITSLGLAAVTLRRRT 225
>gi|183982499|ref|YP_001850790.1| antibiotic resistance ABC transporter, efflux protein [Mycobacterium
marinum M]
gi|183175825|gb|ACC40935.1| antibiotic resistance ABC transporter, efflux protein [Mycobacterium
marinum M]
Length=226
Score = 371 bits (952), Expect = 4e-101, Method: Compositional matrix adjust.
Identities = 196/225 (88%), Positives = 214/225 (96%), Gaps = 0/225 (0%)
Query 1 MILLVPILIITLMYFMFENVPHRPGTPSGFNTACLVLLGLFPLFVMFVITAITMQRERAS 60
MILLVP+L+ITLMYFMFEN PHRPGT + FN ACL+LLGLFPLFVMF+IT+ITMQRERAS
Sbjct 1 MILLVPVLVITLMYFMFENAPHRPGTQTPFNNACLILLGLFPLFVMFIITSITMQRERAS 60
Query 61 GTLERILTTPLRRLDLLAGYGTAFSIAAAAQATLACIVAFWFLGFDTAGSPVWVFAIAIV 120
GTLER+LTTPLRRLD+LAGYGTAFS+AAAAQAT+ACIV+FW LGFDTAGSPVWVF IA+V
Sbjct 61 GTLERVLTTPLRRLDMLAGYGTAFSLAAAAQATVACIVSFWLLGFDTAGSPVWVFVIAVV 120
Query 121 NAVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMPTWLEWISNVMPAS 180
NA+LGVGLGLL SAFARTEFQAVQFIPLVMVPQLLLAGIIVPRA+MPTWLEW+SN MPAS
Sbjct 121 NAILGVGLGLLFSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRAVMPTWLEWVSNAMPAS 180
Query 181 YALEALQQVGAHPELTGIAVRDVVVVLSFAVASLCLAAVTLRRRT 225
YALEALQQVGAHPELT IA+RD+VVV+ FAVASLCLAA TLRRRT
Sbjct 181 YALEALQQVGAHPELTYIALRDIVVVVVFAVASLCLAAATLRRRT 225
>gi|118464599|ref|YP_882270.1| efflux ABC transporter [Mycobacterium avium 104]
gi|118165886|gb|ABK66783.1| ABC transporter efflux protein, DrrB family protein [Mycobacterium
avium 104]
Length=228
Score = 365 bits (937), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 200/225 (89%), Positives = 211/225 (94%), Gaps = 0/225 (0%)
Query 1 MILLVPILIITLMYFMFENVPHRPGTPSGFNTACLVLLGLFPLFVMFVITAITMQRERAS 60
MILLVP+L+ITLMYFMFEN PHRPG P+ FN ACLVLLGLFPLFVMF+ITAITMQRERAS
Sbjct 3 MILLVPVLVITLMYFMFENAPHRPGGPTPFNNACLVLLGLFPLFVMFIITAITMQRERAS 62
Query 61 GTLERILTTPLRRLDLLAGYGTAFSIAAAAQATLACIVAFWFLGFDTAGSPVWVFAIAIV 120
GTLERILTTPLRRLDLL YGTAFS+AAAAQA LACIV+FW LGFDTAGSPVWVF IAIV
Sbjct 63 GTLERILTTPLRRLDLLIAYGTAFSLAAAAQAILACIVSFWLLGFDTAGSPVWVFVIAIV 122
Query 121 NAVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMPTWLEWISNVMPAS 180
NAVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMP WL+WISNV+PAS
Sbjct 123 NAVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMPHWLQWISNVLPAS 182
Query 181 YALEALQQVGAHPELTGIAVRDVVVVLSFAVASLCLAAVTLRRRT 225
YALEALQQVG HPELT IAVRD+VVVL FA+A+LCLAA TLRRRT
Sbjct 183 YALEALQQVGTHPELTFIAVRDIVVVLGFALAALCLAAATLRRRT 227
>gi|254819732|ref|ZP_05224733.1| ABC transporter efflux protein, DrrB family protein [Mycobacterium
intracellulare ATCC 13950]
Length=235
Score = 364 bits (934), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 197/226 (88%), Positives = 211/226 (94%), Gaps = 0/226 (0%)
Query 1 MILLVPILIITLMYFMFENVPHRPGTPSGFNTACLVLLGLFPLFVMFVITAITMQRERAS 60
MILLVP+L+ITLMYFMFEN PHRPG P+ FN ACL+LLGLFPLFVMF+ITAITMQRERAS
Sbjct 10 MILLVPVLVITLMYFMFENAPHRPGGPTPFNNACLILLGLFPLFVMFIITAITMQRERAS 69
Query 61 GTLERILTTPLRRLDLLAGYGTAFSIAAAAQATLACIVAFWFLGFDTAGSPVWVFAIAIV 120
GTLERILTTPLRRLDLL YGTAFS AAAAQA LACIV+FW LGFDTAGSP+WVF IAIV
Sbjct 70 GTLERILTTPLRRLDLLIAYGTAFSTAAAAQAVLACIVSFWLLGFDTAGSPLWVFVIAIV 129
Query 121 NAVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMPTWLEWISNVMPAS 180
NAVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRA+MP WL+WISNV+PAS
Sbjct 130 NAVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRAVMPHWLQWISNVLPAS 189
Query 181 YALEALQQVGAHPELTGIAVRDVVVVLSFAVASLCLAAVTLRRRTS 226
YALEALQQVGAHPELT IAVRD++VVL FA+A+LCLAA TLRRRT
Sbjct 190 YALEALQQVGAHPELTFIAVRDIIVVLGFALAALCLAAATLRRRTG 235
>gi|118617297|ref|YP_905629.1| antibiotic resistance ABC transporter, efflux protein [Mycobacterium
ulcerans Agy99]
gi|118569407|gb|ABL04158.1| antibiotic resistance ABC transporter, efflux protein [Mycobacterium
ulcerans Agy99]
Length=226
Score = 362 bits (929), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 192/225 (86%), Positives = 211/225 (94%), Gaps = 0/225 (0%)
Query 1 MILLVPILIITLMYFMFENVPHRPGTPSGFNTACLVLLGLFPLFVMFVITAITMQRERAS 60
MILLVP+L+ITLMYFMFEN PHRPGT + FN ACL+LLGLFPL V+F+IT+ TMQRERAS
Sbjct 1 MILLVPVLVITLMYFMFENAPHRPGTQTPFNNACLILLGLFPLVVIFIITSFTMQRERAS 60
Query 61 GTLERILTTPLRRLDLLAGYGTAFSIAAAAQATLACIVAFWFLGFDTAGSPVWVFAIAIV 120
GT ER+LTTPLRRLD+LAGYGTAFS+AAAAQAT+ACIV+FW LGFDTAGSPVWVF IA+V
Sbjct 61 GTSERVLTTPLRRLDMLAGYGTAFSLAAAAQATVACIVSFWLLGFDTAGSPVWVFVIAVV 120
Query 121 NAVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMPTWLEWISNVMPAS 180
NA+LGVGLGLL SAFARTEFQAVQFIPLVMVPQLLLAGIIVPRA+MPTWLEW+SN MPAS
Sbjct 121 NAILGVGLGLLFSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRAVMPTWLEWVSNAMPAS 180
Query 181 YALEALQQVGAHPELTGIAVRDVVVVLSFAVASLCLAAVTLRRRT 225
YALEALQQVGAHPELT IA+RD+VVV+ FAVASLCLAA TLRRRT
Sbjct 181 YALEALQQVGAHPELTYIALRDIVVVVVFAVASLCLAAATLRRRT 225
>gi|41407490|ref|NP_960326.1| hypothetical protein MAP1392c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41395842|gb|AAS03709.1| hypothetical protein MAP_1392c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|336457844|gb|EGO36838.1| ABC transporter efflux protein, DrrB family [Mycobacterium avium
subsp. paratuberculosis S397]
Length=226
Score = 354 bits (909), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 199/225 (89%), Positives = 210/225 (94%), Gaps = 0/225 (0%)
Query 1 MILLVPILIITLMYFMFENVPHRPGTPSGFNTACLVLLGLFPLFVMFVITAITMQRERAS 60
MILLVP+L+ITLM+FMFEN PHRPG P+ FN ACLVLLGLFPLFVMF+ITAITMQRERAS
Sbjct 1 MILLVPVLVITLMFFMFENAPHRPGGPTPFNNACLVLLGLFPLFVMFIITAITMQRERAS 60
Query 61 GTLERILTTPLRRLDLLAGYGTAFSIAAAAQATLACIVAFWFLGFDTAGSPVWVFAIAIV 120
GTLERILTTPLRRLDLL YGTAFSIAAAAQA LAC V+FW LGFDTAGSPVWVF IAIV
Sbjct 61 GTLERILTTPLRRLDLLIAYGTAFSIAAAAQAILACTVSFWLLGFDTAGSPVWVFVIAIV 120
Query 121 NAVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMPTWLEWISNVMPAS 180
NAVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMP WL+WISNV+PAS
Sbjct 121 NAVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMPHWLQWISNVLPAS 180
Query 181 YALEALQQVGAHPELTGIAVRDVVVVLSFAVASLCLAAVTLRRRT 225
YALEALQQVG HPELT IAVRD+VVVL FA+A+LCLAA TLRRRT
Sbjct 181 YALEALQQVGTHPELTFIAVRDIVVVLGFALAALCLAAATLRRRT 225
>gi|254775538|ref|ZP_05217054.1| ABC transporter efflux protein, DrrB family protein [Mycobacterium
avium subsp. avium ATCC 25291]
Length=226
Score = 353 bits (905), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 201/225 (90%), Positives = 211/225 (94%), Gaps = 0/225 (0%)
Query 1 MILLVPILIITLMYFMFENVPHRPGTPSGFNTACLVLLGLFPLFVMFVITAITMQRERAS 60
MILLVP+L+ITLMYFMFEN PHRPG P+ FN ACLVLLGLFPLFVMF+ITAITMQRERAS
Sbjct 1 MILLVPVLVITLMYFMFENAPHRPGGPTPFNNACLVLLGLFPLFVMFIITAITMQRERAS 60
Query 61 GTLERILTTPLRRLDLLAGYGTAFSIAAAAQATLACIVAFWFLGFDTAGSPVWVFAIAIV 120
GTLERILTTPLRRLDLL YGTAFSIAAAAQA LACIV+FW LGFDTAGSPVWVF IAIV
Sbjct 61 GTLERILTTPLRRLDLLIAYGTAFSIAAAAQAILACIVSFWLLGFDTAGSPVWVFVIAIV 120
Query 121 NAVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMPTWLEWISNVMPAS 180
NAVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMP WL+WISNV+PAS
Sbjct 121 NAVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMPHWLQWISNVLPAS 180
Query 181 YALEALQQVGAHPELTGIAVRDVVVVLSFAVASLCLAAVTLRRRT 225
YALEALQQVG HPELT IAVRD+VVVL FA+A+LCLAA TLRRRT
Sbjct 181 YALEALQQVGTHPELTFIAVRDIVVVLGFALAALCLAAATLRRRT 225
>gi|342860737|ref|ZP_08717387.1| efflux ABC transporter [Mycobacterium colombiense CECT 3035]
gi|342131761|gb|EGT85018.1| efflux ABC transporter [Mycobacterium colombiense CECT 3035]
Length=235
Score = 351 bits (901), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 195/225 (87%), Positives = 209/225 (93%), Gaps = 0/225 (0%)
Query 1 MILLVPILIITLMYFMFENVPHRPGTPSGFNTACLVLLGLFPLFVMFVITAITMQRERAS 60
MIL VP+L+I+LMYFMFEN PHRPG P+ FN ACL+LLGLFPLFVMF+ITAITMQRERAS
Sbjct 10 MILFVPVLVISLMYFMFENAPHRPGGPTPFNNACLILLGLFPLFVMFIITAITMQRERAS 69
Query 61 GTLERILTTPLRRLDLLAGYGTAFSIAAAAQATLACIVAFWFLGFDTAGSPVWVFAIAIV 120
GTLERILTTPLRRLDLL YG+AFSIAAAAQA LAC+V+FW LGFDTAGSP WVF IAIV
Sbjct 70 GTLERILTTPLRRLDLLIAYGSAFSIAAAAQAILACVVSFWLLGFDTAGSPAWVFVIAIV 129
Query 121 NAVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMPTWLEWISNVMPAS 180
NAVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMP WL+WISNV+PAS
Sbjct 130 NAVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMPHWLQWISNVLPAS 189
Query 181 YALEALQQVGAHPELTGIAVRDVVVVLSFAVASLCLAAVTLRRRT 225
YALEALQQVGAHPELT IAVRD+ VVL FA+A+LCLAA TLRRRT
Sbjct 190 YALEALQQVGAHPELTFIAVRDIAVVLGFALAALCLAAATLRRRT 234
>gi|296164583|ref|ZP_06847151.1| antibiotic resistance ABC superfamily ATP binding cassette transporter,
permease protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295900063|gb|EFG79501.1| antibiotic resistance ABC superfamily ATP binding cassette transporter,
permease protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=241
Score = 348 bits (893), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 191/226 (85%), Positives = 206/226 (92%), Gaps = 0/226 (0%)
Query 1 MILLVPILIITLMYFMFENVPHRPGTPSGFNTACLVLLGLFPLFVMFVITAITMQRERAS 60
MIL VP+L+ITLMYFMF+N PHRPGTP+ FN ACL+LLGLFPLFVMF+ITAITMQRERAS
Sbjct 16 MILFVPVLVITLMYFMFQNAPHRPGTPAPFNNACLILLGLFPLFVMFIITAITMQRERAS 75
Query 61 GTLERILTTPLRRLDLLAGYGTAFSIAAAAQATLACIVAFWFLGFDTAGSPVWVFAIAIV 120
GTLERILTTPLRR DLL YGTAFS AAAAQATLACIV+FW LGFDTAGSP WVF IAIV
Sbjct 76 GTLERILTTPLRRFDLLIAYGTAFSTAAAAQATLACIVSFWLLGFDTAGSPAWVFVIAIV 135
Query 121 NAVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMPTWLEWISNVMPAS 180
NAVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMP WLEW+S+ MPAS
Sbjct 136 NAVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMPHWLEWVSDAMPAS 195
Query 181 YALEALQQVGAHPELTGIAVRDVVVVLSFAVASLCLAAVTLRRRTS 226
YALEALQQVGAHP+LT +AVRD+VVV A+ +L LAA TLRRRT+
Sbjct 196 YALEALQQVGAHPQLTYVAVRDIVVVFGSALIALGLAAATLRRRTA 241
>gi|333990484|ref|YP_004523098.1| antibiotic resistance ABC transporter efflux protein [Mycobacterium
sp. JDM601]
gi|333486452|gb|AEF35844.1| antibiotic resistance ABC transporter efflux protein [Mycobacterium
sp. JDM601]
Length=226
Score = 348 bits (892), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 195/225 (87%), Positives = 210/225 (94%), Gaps = 0/225 (0%)
Query 1 MILLVPILIITLMYFMFENVPHRPGTPSGFNTACLVLLGLFPLFVMFVITAITMQRERAS 60
M+LLVP LIITLMYFMF NVPH PGTPS FN ACL+LLGLFPLF+MFVITAITMQRERAS
Sbjct 1 MVLLVPSLIITLMYFMFANVPHPPGTPSPFNAACLILLGLFPLFLMFVITAITMQRERAS 60
Query 61 GTLERILTTPLRRLDLLAGYGTAFSIAAAAQATLACIVAFWFLGFDTAGSPVWVFAIAIV 120
GTLERILT+PLRRLDLLA YGTAFS+AAAAQA+LAC+VAFW LGF+TAGSP WVF IAIV
Sbjct 61 GTLERILTSPLRRLDLLAAYGTAFSVAAAAQASLACVVAFWLLGFETAGSPAWVFVIAIV 120
Query 121 NAVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMPTWLEWISNVMPAS 180
NAVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRA MP WL+WISN +PAS
Sbjct 121 NAVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRATMPEWLQWISNALPAS 180
Query 181 YALEALQQVGAHPELTGIAVRDVVVVLSFAVASLCLAAVTLRRRT 225
YALEALQQVGAHP+LTGIAVRD+V+VL FA A+L LAAVTLRR+T
Sbjct 181 YALEALQQVGAHPQLTGIAVRDMVIVLVFAAAALALAAVTLRRQT 225
>gi|120404272|ref|YP_954101.1| multidrug ABC transporter inner membrane protein [Mycobacterium
vanbaalenii PYR-1]
gi|119957090|gb|ABM14095.1| ABC drug efflux pump, inner membrane subunit, DrrB family [Mycobacterium
vanbaalenii PYR-1]
Length=251
Score = 335 bits (858), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 176/225 (79%), Positives = 196/225 (88%), Gaps = 0/225 (0%)
Query 1 MILLVPILIITLMYFMFENVPHRPGTPSGFNTACLVLLGLFPLFVMFVITAITMQRERAS 60
MIL+VP L+ITLMYFMF VP RPG PS FN ACL++LG+FPL VMF+IT+ITMQRER S
Sbjct 26 MILVVPTLVITLMYFMFAEVPQRPGAPSPFNNACLIMLGVFPLIVMFLITSITMQRERVS 85
Query 61 GTLERILTTPLRRLDLLAGYGTAFSIAAAAQATLACIVAFWFLGFDTAGSPVWVFAIAIV 120
GTLERILTTPLRRLDLLA YGTAF++AAAAQA AC V+FW LG DTAGS +WVFAIAIV
Sbjct 86 GTLERILTTPLRRLDLLAAYGTAFALAAAAQAVFACAVSFWLLGLDTAGSALWVFAIAIV 145
Query 121 NAVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMPTWLEWISNVMPAS 180
NAVLGVGLGLLCSAFARTEFQAVQF+PLV+ PQLLL GI+VPRA +P WL+WISN +PAS
Sbjct 146 NAVLGVGLGLLCSAFARTEFQAVQFMPLVIAPQLLLCGIVVPRAQLPDWLQWISNALPAS 205
Query 181 YALEALQQVGAHPELTGIAVRDVVVVLSFAVASLCLAAVTLRRRT 225
YALEALQ+V AHPELT +AVRD+ VVL F V SL LAA TLRRRT
Sbjct 206 YALEALQEVNAHPELTSVAVRDIAVVLGFTVISLTLAAATLRRRT 250
>gi|126435552|ref|YP_001071243.1| multidrug ABC transporter inner membrane protein [Mycobacterium
sp. JLS]
gi|126235352|gb|ABN98752.1| ABC drug efflux pump, inner membrane subunit, DrrB family [Mycobacterium
sp. JLS]
Length=226
Score = 327 bits (837), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 172/225 (77%), Positives = 198/225 (88%), Gaps = 0/225 (0%)
Query 1 MILLVPILIITLMYFMFENVPHRPGTPSGFNTACLVLLGLFPLFVMFVITAITMQRERAS 60
MILLVP +IITL+YFMF +VPH PGTPS F ACL++LG+FPL VMF+IT+ITMQRER S
Sbjct 1 MILLVPSVIITLIYFMFADVPHAPGTPSPFTNACLIMLGVFPLIVMFLITSITMQRERVS 60
Query 61 GTLERILTTPLRRLDLLAGYGTAFSIAAAAQATLACIVAFWFLGFDTAGSPVWVFAIAIV 120
GTLERIL TPLRR DLLA YGTAFS+AAAAQA+LAC+VAFWFLGF+TAGSP+ V IAIV
Sbjct 61 GTLERILATPLRRADLLAAYGTAFSLAAAAQASLACVVAFWFLGFETAGSPLLVIGIAIV 120
Query 121 NAVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMPTWLEWISNVMPAS 180
NAVLGVGLGLLCSAFARTEFQAVQF+PLV+ PQLLL GIIVPR +P WL+W+SNVMPAS
Sbjct 121 NAVLGVGLGLLCSAFARTEFQAVQFMPLVIAPQLLLCGIIVPRNALPEWLQWVSNVMPAS 180
Query 181 YALEALQQVGAHPELTGIAVRDVVVVLSFAVASLCLAAVTLRRRT 225
YALEAL++V AHPE T AVRD+ +V++FAV ++ LAA TLRRRT
Sbjct 181 YALEALREVSAHPEPTATAVRDITIVVAFAVVAMFLAAATLRRRT 225
>gi|118472419|ref|YP_888057.1| ABC transporter [Mycobacterium smegmatis str. MC2 155]
gi|118173706|gb|ABK74602.1| ABC transporter efflux protein, DrrB family protein [Mycobacterium
smegmatis str. MC2 155]
Length=256
Score = 322 bits (826), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 177/225 (79%), Positives = 199/225 (89%), Gaps = 0/225 (0%)
Query 1 MILLVPILIITLMYFMFENVPHRPGTPSGFNTACLVLLGLFPLFVMFVITAITMQRERAS 60
MILLVP LIITL+YFMF++VP RPG PS FNTACL++LG+FPL VMF+IT+ITMQRER S
Sbjct 31 MILLVPSLIITLIYFMFDDVPQRPGAPSPFNTACLIMLGVFPLIVMFLITSITMQRERVS 90
Query 61 GTLERILTTPLRRLDLLAGYGTAFSIAAAAQATLACIVAFWFLGFDTAGSPVWVFAIAIV 120
GTLERILTTPLRR DLLA YGTAFS+AAAAQATLAC VAFW LGF T GSP+ V IAIV
Sbjct 91 GTLERILTTPLRRFDLLAAYGTAFSLAAAAQATLACTVAFWLLGFHTEGSPLLVVGIAIV 150
Query 121 NAVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMPTWLEWISNVMPAS 180
NAVLGVGLGLLCSAFARTEFQAVQF+PLV+ PQLLL GIIVPRA +P WL+W+SN +PAS
Sbjct 151 NAVLGVGLGLLCSAFARTEFQAVQFMPLVIAPQLLLCGIIVPRAALPEWLQWVSNALPAS 210
Query 181 YALEALQQVGAHPELTGIAVRDVVVVLSFAVASLCLAAVTLRRRT 225
YALEALQ+VGA+P+LT AVRD+ VV+ FAV +LCLAA TLRRRT
Sbjct 211 YALEALQEVGAYPDLTATAVRDISVVVGFAVLALCLAAATLRRRT 255
>gi|108799924|ref|YP_640121.1| ABC transporter efflux protein DrrB [Mycobacterium sp. MCS]
gi|119869034|ref|YP_938986.1| multidrug ABC transporter inner membrane protein [Mycobacterium
sp. KMS]
gi|108770343|gb|ABG09065.1| ABC transporter, DrrB efflux protein [Mycobacterium sp. MCS]
gi|119695123|gb|ABL92196.1| ABC drug efflux pump, inner membrane subunit, DrrB family [Mycobacterium
sp. KMS]
Length=226
Score = 314 bits (804), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 172/225 (77%), Positives = 198/225 (88%), Gaps = 0/225 (0%)
Query 1 MILLVPILIITLMYFMFENVPHRPGTPSGFNTACLVLLGLFPLFVMFVITAITMQRERAS 60
MILLVP +IITL+YFMF +VPH PGTPS F ACL++LG+FPL VMF+IT+ITMQRER S
Sbjct 1 MILLVPSVIITLIYFMFADVPHAPGTPSPFTNACLIMLGVFPLIVMFLITSITMQRERVS 60
Query 61 GTLERILTTPLRRLDLLAGYGTAFSIAAAAQATLACIVAFWFLGFDTAGSPVWVFAIAIV 120
GTLERIL TPLRR DLLA YGTAFS+AAAAQA+LAC+VAFWFLGF+TAGSP+ V IAIV
Sbjct 61 GTLERILATPLRRADLLAAYGTAFSLAAAAQASLACVVAFWFLGFETAGSPLLVIGIAIV 120
Query 121 NAVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMPTWLEWISNVMPAS 180
NAVLGVGLGLLCSAFARTEFQAVQF+PLV+ PQLLL GIIVPR +P WL+W+SNVMPAS
Sbjct 121 NAVLGVGLGLLCSAFARTEFQAVQFMPLVIAPQLLLCGIIVPRNALPEWLQWVSNVMPAS 180
Query 181 YALEALQQVGAHPELTGIAVRDVVVVLSFAVASLCLAAVTLRRRT 225
YALEAL++V AHPE T AVRD+ +V++FAV ++ LAA TLRRRT
Sbjct 181 YALEALREVSAHPEPTATAVRDIAIVVAFAVVAMFLAAATLRRRT 225
>gi|312139864|ref|YP_004007200.1| ABC transporter transmembrane protein [Rhodococcus equi 103S]
gi|325674259|ref|ZP_08153948.1| ABC superfamily ATP binding cassette transporter, permease protein
[Rhodococcus equi ATCC 33707]
gi|311889203|emb|CBH48517.1| putative ABC-2 type transporter integral membrane subunit [Rhodococcus
equi 103S]
gi|325554939|gb|EGD24612.1| ABC superfamily ATP binding cassette transporter, permease protein
[Rhodococcus equi ATCC 33707]
Length=253
Score = 270 bits (690), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 145/225 (65%), Positives = 177/225 (79%), Gaps = 0/225 (0%)
Query 1 MILLVPILIITLMYFMFENVPHRPGTPSGFNTACLVLLGLFPLFVMFVITAITMQRERAS 60
MIL VP LI+ L+YF+++NVP PG F+ + +LG+ P VMF++T+I MQRER+S
Sbjct 28 MILFVPSLIMVLLYFLYQNVPTPPGQTPLFDRIAITMLGIIPFIVMFLVTSIAMQRERSS 87
Query 61 GTLERILTTPLRRLDLLAGYGTAFSIAAAAQATLACIVAFWFLGFDTAGSPVWVFAIAIV 120
GTLER+LTTPL +LDLLAGYGTAFSIAAAAQA LAC VAFWFL T G+ WV IA++
Sbjct 88 GTLERLLTTPLSKLDLLAGYGTAFSIAAAAQAALACGVAFWFLSLTTQGNAFWVILIAVL 147
Query 121 NAVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMPTWLEWISNVMPAS 180
NAVLGV LGLLCSAFARTEFQAVQF+P++++PQLLL G++VPR +P WLEWISNV+P S
Sbjct 148 NAVLGVALGLLCSAFARTEFQAVQFMPVIVIPQLLLCGLLVPRNQLPQWLEWISNVLPLS 207
Query 181 YALEALQQVGAHPELTGIAVRDVVVVLSFAVASLCLAAVTLRRRT 225
YA+EALQQV HP T + RD+ +V SF V +L L A TLRRRT
Sbjct 208 YAVEALQQVATHPGTTALMWRDLGIVASFVVVALGLGAATLRRRT 252
>gi|111017959|ref|YP_700931.1| ABC transporter permease [Rhodococcus jostii RHA1]
gi|110817489|gb|ABG92773.1| ABC transporter, permease component [Rhodococcus jostii RHA1]
Length=251
Score = 248 bits (633), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 142/225 (64%), Positives = 176/225 (79%), Gaps = 0/225 (0%)
Query 1 MILLVPILIITLMYFMFENVPHRPGTPSGFNTACLVLLGLFPLFVMFVITAITMQRERAS 60
MIL+VP L++ L+YF+++NVP PG S F + +LG+ P VMF++T+I MQRER S
Sbjct 26 MILVVPSLLMVLLYFLYQNVPAPPGQQSLFERVAITMLGILPFVVMFLVTSIAMQRERTS 85
Query 61 GTLERILTTPLRRLDLLAGYGTAFSIAAAAQATLACIVAFWFLGFDTAGSPVWVFAIAIV 120
GTLER+LTTP+ +LDLL GY AFS AAAAQA LACIV+F FLG T GS WV IA++
Sbjct 86 GTLERLLTTPMGKLDLLGGYAAAFSTAAAAQAALACIVSFGFLGLTTEGSVTWVLLIAVL 145
Query 121 NAVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMPTWLEWISNVMPAS 180
NA+LGV LGLLCSAFARTEFQAVQF+P+V+VPQL L G++VPR +PTWLEWISNV+P S
Sbjct 146 NAILGVALGLLCSAFARTEFQAVQFMPVVVVPQLFLCGLLVPRDQLPTWLEWISNVLPLS 205
Query 181 YALEALQQVGAHPELTGIAVRDVVVVLSFAVASLCLAAVTLRRRT 225
YA++ALQQV HP TG+ RD+ VV +FA+ +L L A TLRRRT
Sbjct 206 YAVDALQQVATHPGATGVMWRDLAVVAAFALLALSLGAATLRRRT 250
>gi|226360090|ref|YP_002777868.1| ABC transporter permease protein [Rhodococcus opacus B4]
gi|226238575|dbj|BAH48923.1| putative ABC transporter permease protein [Rhodococcus opacus
B4]
Length=251
Score = 244 bits (623), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 143/225 (64%), Positives = 175/225 (78%), Gaps = 0/225 (0%)
Query 1 MILLVPILIITLMYFMFENVPHRPGTPSGFNTACLVLLGLFPLFVMFVITAITMQRERAS 60
MIL+VP L++ L+YF+++NVP PG S F + +LG+ P VMF++T+I MQRER S
Sbjct 26 MILVVPSLLMVLLYFLYQNVPAPPGQQSLFERVAITMLGILPFVVMFLVTSIAMQRERTS 85
Query 61 GTLERILTTPLRRLDLLAGYGTAFSIAAAAQATLACIVAFWFLGFDTAGSPVWVFAIAIV 120
GTLER+LTTP+ +LDLL GY AFS AAAAQA LAC VAF FLG T GS WV IA++
Sbjct 86 GTLERLLTTPMGKLDLLGGYAAAFSTAAAAQAGLACAVAFGFLGLTTEGSVTWVLLIAVL 145
Query 121 NAVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMPTWLEWISNVMPAS 180
NA+LGV LGLLCSAFARTEFQAVQF+P+V+VPQL L G++VPR +PTWLEWISNV+P S
Sbjct 146 NAILGVALGLLCSAFARTEFQAVQFMPVVVVPQLFLCGLLVPRDQLPTWLEWISNVLPLS 205
Query 181 YALEALQQVGAHPELTGIAVRDVVVVLSFAVASLCLAAVTLRRRT 225
YA+EALQQV HP TG+ RD+ VV +FA+ +L L A TLRRRT
Sbjct 206 YAVEALQQVATHPGATGLMWRDLAVVAAFALLALSLGAATLRRRT 250
>gi|54023956|ref|YP_118198.1| putative transporter [Nocardia farcinica IFM 10152]
gi|54015464|dbj|BAD56834.1| putative transporter [Nocardia farcinica IFM 10152]
Length=254
Score = 241 bits (614), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 134/225 (60%), Positives = 174/225 (78%), Gaps = 0/225 (0%)
Query 1 MILLVPILIITLMYFMFENVPHRPGTPSGFNTACLVLLGLFPLFVMFVITAITMQRERAS 60
MIL+VP L++TL+YF++ + P P P+ F+ + +LG+ P VMF+ITAI MQRER S
Sbjct 29 MILVVPALLMTLLYFIYADTPASPHAPALFDRVGISMLGILPFIVMFLITAIAMQRERTS 88
Query 61 GTLERILTTPLRRLDLLAGYGTAFSIAAAAQATLACIVAFWFLGFDTAGSPVWVFAIAIV 120
GTLER+LTTPL +LDLL GYG+AFS+AAAAQA +AC+VAF LG + AG+P WV IA+V
Sbjct 89 GTLERLLTTPLSKLDLLGGYGSAFSLAAAAQAAVACLVAFGLLGLEAAGNPGWVVLIAVV 148
Query 121 NAVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMPTWLEWISNVMPAS 180
+A+ GV LGLL SAFARTEFQAVQF+P+V+ PQ+ L G++VPR +P WLE ISNVMP S
Sbjct 149 DAICGVALGLLASAFARTEFQAVQFMPVVVAPQIFLCGLLVPRDQLPRWLEIISNVMPLS 208
Query 181 YALEALQQVGAHPELTGIAVRDVVVVLSFAVASLCLAAVTLRRRT 225
YA++ALQ+V HPE TG D+++V FA+ +L L A TLRR+T
Sbjct 209 YAVDALQEVSVHPEATGPMWVDLLIVAGFALVALVLGAATLRRQT 253
>gi|325962796|ref|YP_004240702.1| ABC transporter efflux protein, DrrB family [Arthrobacter phenanthrenivorans
Sphe3]
gi|323468883|gb|ADX72568.1| ABC transporter efflux protein, DrrB family [Arthrobacter phenanthrenivorans
Sphe3]
Length=247
Score = 238 bits (607), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 121/225 (54%), Positives = 163/225 (73%), Gaps = 0/225 (0%)
Query 1 MILLVPILIITLMYFMFENVPHRPGTPSGFNTACLVLLGLFPLFVMFVITAITMQRERAS 60
MIL+VP L++T +YF++EN PG P F+ L++L +FP VMF++T+ITM RER S
Sbjct 22 MILVVPALLLTAVYFLYENETLPPGVPRTFDRVGLMMLAIFPFVVMFLVTSITMLRERTS 81
Query 61 GTLERILTTPLRRLDLLAGYGTAFSIAAAAQATLACIVAFWFLGFDTAGSPVWVFAIAIV 120
GTLER+LTTP+ + DLL GYG AFSI AA Q+ +A VA+W D GSP +V IA++
Sbjct 82 GTLERLLTTPVHKADLLFGYGLAFSIMAALQSLVATAVAYWIFDLDILGSPGYVVFIAVI 141
Query 121 NAVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMPTWLEWISNVMPAS 180
NAVLGV LGL CSAFARTEFQAVQF+P+V+VPQ+LL G+ VPR M LE +SNV+P +
Sbjct 142 NAVLGVALGLFCSAFARTEFQAVQFMPVVVVPQILLCGLFVPRDRMNDVLEAVSNVLPLT 201
Query 181 YALEALQQVGAHPELTGIAVRDVVVVLSFAVASLCLAAVTLRRRT 225
++++ALQ+V AH E T +D ++ + + L LAA TLRR++
Sbjct 202 FSVDALQEVAAHAEATARLWQDAGIMAAIVLGVLVLAAFTLRRQS 246
>gi|226306760|ref|YP_002766720.1| ABC transporter permease protein [Rhodococcus erythropolis PR4]
gi|229492699|ref|ZP_04386500.1| ABC transporter efflux protein, DrrB family [Rhodococcus erythropolis
SK121]
gi|226185877|dbj|BAH33981.1| putative ABC transporter permease protein [Rhodococcus erythropolis
PR4]
gi|229320358|gb|EEN86178.1| ABC transporter efflux protein, DrrB family [Rhodococcus erythropolis
SK121]
Length=251
Score = 231 bits (588), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 139/225 (62%), Positives = 175/225 (78%), Gaps = 0/225 (0%)
Query 1 MILLVPILIITLMYFMFENVPHRPGTPSGFNTACLVLLGLFPLFVMFVITAITMQRERAS 60
MILLVP L++ L+YF++++VP PG S F + +LG+ P VMF++T+I MQRER+S
Sbjct 26 MILLVPSLLMILLYFLYQDVPTPPGQVSLFQRVAITMLGILPFVVMFLVTSIAMQRERSS 85
Query 61 GTLERILTTPLRRLDLLAGYGTAFSIAAAAQATLACIVAFWFLGFDTAGSPVWVFAIAIV 120
GTLER+LTTP+ +LDLLAGYG AFS++AAAQA LAC VAF FLG AGS WV IA++
Sbjct 86 GTLERLLTTPMGKLDLLAGYGAAFSLSAAAQAALACAVAFGFLGLTIAGSLAWVIVIAVL 145
Query 121 NAVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMPTWLEWISNVMPAS 180
A+LGV LGLL SAFA+TEFQAVQF+P+V+VPQL L G++VPR +PTWLEWISNV+P S
Sbjct 146 GAILGVALGLLASAFAKTEFQAVQFMPVVVVPQLFLCGLLVPRDQLPTWLEWISNVLPLS 205
Query 181 YALEALQQVGAHPELTGIAVRDVVVVLSFAVASLCLAAVTLRRRT 225
YA++ALQQV H + TG RD+ V+ FA A+L LAA TL RRT
Sbjct 206 YAVDALQQVSMHADATGQMWRDLAVMAGFAAAALSLAAATLDRRT 250
>gi|302868883|ref|YP_003837520.1| drug efflux ABC transporter inner membrane protein [Micromonospora
aurantiaca ATCC 27029]
gi|315504647|ref|YP_004083534.1| ABC drug efflux pump, inner membrane subunit, drrb family [Micromonospora
sp. L5]
gi|302571742|gb|ADL47944.1| ABC drug efflux pump, inner membrane subunit, DrrB family [Micromonospora
aurantiaca ATCC 27029]
gi|315411266|gb|ADU09383.1| ABC drug efflux pump, inner membrane subunit, DrrB family [Micromonospora
sp. L5]
Length=251
Score = 226 bits (577), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 124/213 (59%), Positives = 156/213 (74%), Gaps = 0/213 (0%)
Query 14 YFMFENVPHRPGTPSGFNTACLVLLGLFPLFVMFVITAITMQRERASGTLERILTTPLRR 73
YFM+ + P PG PS F+ L++LG FP +MF++T+I M RER +GTLER+LTTPL +
Sbjct 39 YFMYVDQPAPPGGPSTFDRVALIMLGFFPFIIMFLVTSIAMLRERTTGTLERLLTTPLGK 98
Query 74 LDLLAGYGTAFSIAAAAQATLACIVAFWFLGFDTAGSPVWVFAIAIVNAVLGVGLGLLCS 133
LDLL GYG AF +A Q+T+A +VA+ G +TAGS V IA VNAVL V LGL CS
Sbjct 99 LDLLFGYGIAFGLAGVLQSTVASVVAYRVFGLETAGSAWLVVLIAGVNAVLAVALGLFCS 158
Query 134 AFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMPTWLEWISNVMPASYALEALQQVGAHP 193
AFARTEFQAVQF+P+V+ PQLLL G+ VPR M WL+ +S+V+P SYA+EALQ+VGAH
Sbjct 159 AFARTEFQAVQFMPVVVAPQLLLCGLFVPRGEMAGWLQAVSDVLPLSYAVEALQEVGAHA 218
Query 194 ELTGIAVRDVVVVLSFAVASLCLAAVTLRRRTS 226
E TG RD+ +V AVA+L LAA TLRRR+
Sbjct 219 EPTGTMWRDLAIVAGAAVAALVLAAATLRRRSG 251
>gi|119964004|ref|YP_947317.1| DrrB family ABC transporter [Arthrobacter aurescens TC1]
gi|119950863|gb|ABM09774.1| putative ABC transporter efflux protein, DrrB family [Arthrobacter
aurescens TC1]
Length=247
Score = 225 bits (574), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 115/225 (52%), Positives = 161/225 (72%), Gaps = 0/225 (0%)
Query 1 MILLVPILIITLMYFMFENVPHRPGTPSGFNTACLVLLGLFPLFVMFVITAITMQRERAS 60
+IL+VP L++T +YF+FEN PG P F+ L++L +FP VMF++T+ITM RER S
Sbjct 22 LILVVPALLLTAVYFLFENETLPPGFPRTFDRVGLMMLAIFPFVVMFLVTSITMLRERTS 81
Query 61 GTLERILTTPLRRLDLLAGYGTAFSIAAAAQATLACIVAFWFLGFDTAGSPVWVFAIAIV 120
GTLER+LTTP+ + DLL GY AFSI AA Q+ +A VA+W D GSP V IA++
Sbjct 82 GTLERLLTTPIHKADLLFGYALAFSIMAALQSLVATAVAYWIFDLDIKGSPGLVVMIAVI 141
Query 121 NAVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMPTWLEWISNVMPAS 180
NAVLGV LGLLCSAFARTEFQAVQF+P+V+VPQ+LL G+ V R M LE IS+V+P +
Sbjct 142 NAVLGVALGLLCSAFARTEFQAVQFMPVVVVPQILLCGLFVARDDMNEVLEAISSVLPLT 201
Query 181 YALEALQQVGAHPELTGIAVRDVVVVLSFAVASLCLAAVTLRRRT 225
++++AL+++ + + + +D +++ V L LA++TLRR+T
Sbjct 202 FSVDALKEIAGNADASAAMWQDALIMGGIVVGVLVLASLTLRRQT 246
>gi|330469256|ref|YP_004406999.1| ABC drug efflux pump, inner membrane subunit, drrb family protein
[Verrucosispora maris AB-18-032]
gi|328812227|gb|AEB46399.1| abc drug efflux pump, inner membrane subunit, drrb family protein
[Verrucosispora maris AB-18-032]
Length=251
Score = 214 bits (546), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 125/213 (59%), Positives = 154/213 (73%), Gaps = 0/213 (0%)
Query 14 YFMFENVPHRPGTPSGFNTACLVLLGLFPLFVMFVITAITMQRERASGTLERILTTPLRR 73
Y+M+ + P PGT S F+ LV+LG FP +MF++T+I M RER SGTLER+LTTPL +
Sbjct 39 YYMYADQPSVPGTSSAFDRIALVMLGFFPFIIMFLVTSIAMLRERTSGTLERLLTTPLAK 98
Query 74 LDLLAGYGTAFSIAAAAQATLACIVAFWFLGFDTAGSPVWVFAIAIVNAVLGVGLGLLCS 133
DLL GYG AF +A A QAT+A VA+W TAGS V IA +NAVL V LGLLCS
Sbjct 99 ADLLFGYGIAFGLAGAVQATIASAVAYWVFDLHTAGSSGLVIMIAALNAVLAVALGLLCS 158
Query 134 AFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMPTWLEWISNVMPASYALEALQQVGAHP 193
AFARTEFQAVQF+P+V+ PQLLL G+ VPR M WL+ +S+ +P +YA+EALQ+VGAH
Sbjct 159 AFARTEFQAVQFMPVVVAPQLLLCGLFVPREQMAGWLQAVSDALPLTYAVEALQEVGAHA 218
Query 194 ELTGIAVRDVVVVLSFAVASLCLAAVTLRRRTS 226
E T RDV VV + AV +L LAA TLRRR+S
Sbjct 219 EPTATMWRDVAVVAAVAVLALLLAAATLRRRSS 251
>gi|239988636|ref|ZP_04709300.1| putative ABC transporter permease protein [Streptomyces roseosporus
NRRL 11379]
gi|291445624|ref|ZP_06585014.1| ABC transporter permease protein [Streptomyces roseosporus NRRL
15998]
gi|291348571|gb|EFE75475.1| ABC transporter permease protein [Streptomyces roseosporus NRRL
15998]
Length=240
Score = 199 bits (506), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 110/225 (49%), Positives = 149/225 (67%), Gaps = 6/225 (2%)
Query 1 MILLVPILIITLMYFMFENVPHRPGTPSGFNTACLVLLGLFPLFVMFVITAITMQRERAS 60
++++VP+L+ITL+ ++F+ G P F+ LLG+FPL MF++T+I RER +
Sbjct 21 LLVIVPVLLITLLRYVFD------GAPGTFDATGASLLGIFPLITMFLVTSIATLRERTT 74
Query 61 GTLERILTTPLRRLDLLAGYGTAFSIAAAAQATLACIVAFWFLGFDTAGSPVWVFAIAIV 120
GTLER+L PL + L+ GY AF A Q+ LA V+ W LG D GSP + +A++
Sbjct 75 GTLERLLALPLGKGGLVGGYALAFGAVAVVQSALATAVSVWLLGLDVVGSPWLLLLVALL 134
Query 121 NAVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMPTWLEWISNVMPAS 180
+A+LG LGL SAFA +EFQAVQF+P V+ PQLLL G+ PR M LE ISNV+P S
Sbjct 135 DALLGTALGLFVSAFAASEFQAVQFMPAVIFPQLLLCGLFTPREAMHPVLEAISNVLPMS 194
Query 181 YALEALQQVGAHPELTGIAVRDVVVVLSFAVASLCLAAVTLRRRT 225
YA++ + QV HPE+TG VRD+ VV A+ LCL A+TLRRRT
Sbjct 195 YAVDGMNQVLQHPEITGDFVRDIAVVAGSALLVLCLGAITLRRRT 239
>gi|119714743|ref|YP_921708.1| ABC transporter [Nocardioides sp. JS614]
gi|119535404|gb|ABL80021.1| ABC-2 type transporter [Nocardioides sp. JS614]
Length=245
Score = 198 bits (504), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 109/226 (49%), Positives = 153/226 (68%), Gaps = 8/226 (3%)
Query 1 MILLVPILIITLMYFMFENVPHRPGTPSGFNTACLVLLGLFPLFVMFVITAITMQRERAS 60
M+L++P L+I+LM++M++ P F+ LL +FP+ VMF++T++T RER+S
Sbjct 26 MLLVLPCLLISLMWWMYDE-----ANPLLFDRIGPALLAMFPVIVMFLVTSVTTLRERSS 80
Query 61 GTLERILTTPLRRLDLLAGYGTAFSIAAAAQATLACIVAFWFLGFDTAGSPVWVFAI-AI 119
GTLER+L P+ +LD L GY AF + AA Q+ LA V+ L D G PVW+ + A+
Sbjct 81 GTLERLLAMPMGKLDFLVGYAIAFGLVAAVQSVLAVAVSIGLLDLDLEG-PVWLLTVVAV 139
Query 120 VNAVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMPTWLEWISNVMPA 179
V+AVLG LGL SAFA+TEFQAVQF+P +++PQLLL G++VPR L+P L +S+V+P
Sbjct 140 VDAVLGSALGLFVSAFAQTEFQAVQFMPAIVIPQLLLCGLLVPRELLPDVLRQLSDVLPL 199
Query 180 SYALEALQQVGAHPELTGIAVRDVVVVLSFAVASLCLAAVTLRRRT 225
SYA++A+Q + TG RDV +V +FAVA L A TLRRRT
Sbjct 200 SYAVDAMQHLTTSSA-TGQVWRDVAIVGAFAVAGLAFGAATLRRRT 244
>gi|296140096|ref|YP_003647339.1| multidrug ABC transporter inner membrane protein [Tsukamurella
paurometabola DSM 20162]
gi|296028230|gb|ADG79000.1| ABC drug efflux pump, inner membrane subunit, DrrB family [Tsukamurella
paurometabola DSM 20162]
Length=252
Score = 197 bits (501), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 111/196 (57%), Positives = 147/196 (75%), Gaps = 3/196 (1%)
Query 1 MILLVPILIITLMYFMFENVPHRPGTPSGFNTACLVLLGLFPLFVMFVITAITMQRERAS 60
MI++VP ++TLMYF++ + PG + F+ LVLLG+ P +MF++T+I MQRER S
Sbjct 30 MIVVVPTALLTLMYFLYRD---SPGGTALFSRIALVLLGVLPFALMFIVTSIAMQRERVS 86
Query 61 GTLERILTTPLRRLDLLAGYGTAFSIAAAAQATLACIVAFWFLGFDTAGSPVWVFAIAIV 120
GTLER+LTTPL + DLL GY AFS+AA AQA +A VA + LG +TAGS V IA+V
Sbjct 87 GTLERLLTTPLAKADLLLGYAVAFSVAATAQAVVATTVAAYLLGMETAGSVWLVILIAVV 146
Query 121 NAVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMPTWLEWISNVMPAS 180
+A LGV LGLL SAFARTEFQAVQF+P+V+VPQ+ L G++VP MP WL+ I++V+P +
Sbjct 147 DAWLGVALGLLFSAFARTEFQAVQFMPIVVVPQIFLCGLLVPHDAMPGWLQGIADVLPMT 206
Query 181 YALEALQQVGAHPELT 196
YA++ALQ+VGAH T
Sbjct 207 YAVKALQEVGAHGSAT 222
>gi|145595693|ref|YP_001159990.1| multidrug ABC transporter inner membrane protein [Salinispora
tropica CNB-440]
gi|145305030|gb|ABP55612.1| ABC drug efflux pump, inner membrane subunit, DrrB family [Salinispora
tropica CNB-440]
Length=251
Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 123/226 (55%), Positives = 161/226 (72%), Gaps = 0/226 (0%)
Query 1 MILLVPILIITLMYFMFENVPHRPGTPSGFNTACLVLLGLFPLFVMFVITAITMQRERAS 60
++++VP ++ ++Y+M+ + P PG P+ F+ LVLLG FP +MF++T+I M RER S
Sbjct 26 LLVVVPAALLAVVYYMYVDQPTPPGQPAPFDRIALVLLGFFPFIIMFLVTSIAMLRERTS 85
Query 61 GTLERILTTPLRRLDLLAGYGTAFSIAAAAQATLACIVAFWFLGFDTAGSPVWVFAIAIV 120
GTLER+LTTPL +LDLL GYG AF +AA QA +A VA+W DTAGS V IA V
Sbjct 86 GTLERLLTTPLGKLDLLFGYGIAFGLAAVVQAAVAAAVAYWLFDLDTAGSSGLVILIAAV 145
Query 121 NAVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMPTWLEWISNVMPAS 180
NAVL V LGL CSAFARTEFQAVQF+P+V+ PQLLL G+ VPR M WL+ +S+V+P S
Sbjct 146 NAVLAVALGLFCSAFARTEFQAVQFMPVVVAPQLLLCGLFVPRDEMAGWLQAVSDVLPLS 205
Query 181 YALEALQQVGAHPELTGIAVRDVVVVLSFAVASLCLAAVTLRRRTS 226
Y++EALQ+VG+ E T RD+ +V V +L LAA TLRRR+
Sbjct 206 YSVEALQEVGSSTEPTVTMWRDLAIVGGATVLALVLAAATLRRRSG 251
>gi|320010102|gb|ADW04952.1| ABC-2 type transporter [Streptomyces flavogriseus ATCC 33331]
Length=252
Score = 194 bits (492), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 109/226 (49%), Positives = 152/226 (68%), Gaps = 6/226 (2%)
Query 1 MILLVPILIITLMYFMFENVPHRPGTPSGFNTACLVLLGLFPLFVMFVITAITMQRERAS 60
++L+VP+L+ITL+ ++F++ P+ F+ LLG+FPL MF++T+I RER S
Sbjct 33 LLLIVPVLMITLLRYVFDS------DPATFDAIGASLLGIFPLITMFLVTSIATLRERTS 86
Query 61 GTLERILTTPLRRLDLLAGYGTAFSIAAAAQATLACIVAFWFLGFDTAGSPVWVFAIAIV 120
GTLER+L PL + DL+AGY AF A AQ+ LA ++ W LG D GSP + +A++
Sbjct 87 GTLERLLALPLGKGDLIAGYALAFGAVAVAQSLLATAMSVWVLGLDVVGSPWLLLLVALL 146
Query 121 NAVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMPTWLEWISNVMPAS 180
+A+LG LGL SAFA +EFQAVQF+P V+ PQLLL G+ PR M LE +S+V+P S
Sbjct 147 DALLGTALGLFVSAFAASEFQAVQFMPAVIFPQLLLCGLFTPRDRMHPVLETLSDVLPMS 206
Query 181 YALEALQQVGAHPELTGIAVRDVVVVLSFAVASLCLAAVTLRRRTS 226
YA++ + QV AH ++T RDV+VV A+ LCL A TLRRRT+
Sbjct 207 YAVDGMNQVLAHTDVTADFHRDVLVVAGCALLVLCLGAATLRRRTT 252
>gi|328883246|emb|CCA56485.1| putative ABC transporter permease protein [Streptomyces venezuelae
ATCC 10712]
Length=245
Score = 194 bits (492), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 110/226 (49%), Positives = 151/226 (67%), Gaps = 6/226 (2%)
Query 1 MILLVPILIITLMYFMFENVPHRPGTPSGFNTACLVLLGLFPLFVMFVITAITMQRERAS 60
++LLVP +++ L+ ++F+ G+P F+ LLG+FPL MF++T+I RER S
Sbjct 26 LMLLVPCVMLFLLRYVFD------GSPGTFDNIGASLLGIFPLITMFLVTSIATLRERTS 79
Query 61 GTLERILTTPLRRLDLLAGYGTAFSIAAAAQATLACIVAFWFLGFDTAGSPVWVFAIAIV 120
GTLER+L PL + DL+AGY AF + A Q+TLA +A WFLG D GSP + +A++
Sbjct 80 GTLERLLAMPLGKSDLIAGYALAFGLLAVVQSTLATGLAVWFLGLDVIGSPWLLLLVALL 139
Query 121 NAVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMPTWLEWISNVMPAS 180
+A+LG LGL SAFA +EFQAVQF+P V+ PQLLL G+ PR M LE IS+V+P S
Sbjct 140 DALLGTALGLFVSAFAASEFQAVQFMPAVIFPQLLLCGLFTPRDHMAPALEAISDVLPMS 199
Query 181 YALEALQQVGAHPELTGIAVRDVVVVLSFAVASLCLAAVTLRRRTS 226
YA++ + QV HP++ G VRD +VV A+ L L A TLRRRT+
Sbjct 200 YAVDGMNQVLRHPDIPGDFVRDALVVAGCALLVLGLGAATLRRRTA 245
>gi|182437933|ref|YP_001825652.1| putative ABC transporter permease protein [Streptomyces griseus
subsp. griseus NBRC 13350]
gi|326778569|ref|ZP_08237834.1| ABC-2 type transporter [Streptomyces cf. griseus XylebKG-1]
gi|178466449|dbj|BAG20969.1| putative ABC transporter permease protein [Streptomyces griseus
subsp. griseus NBRC 13350]
gi|326658902|gb|EGE43748.1| ABC-2 type transporter [Streptomyces griseus XylebKG-1]
Length=266
Score = 192 bits (489), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 109/215 (51%), Positives = 142/215 (67%), Gaps = 6/215 (2%)
Query 11 TLMYFMFENVPHRPGTPSGFNTACLVLLGLFPLFVMFVITAITMQRERASGTLERILTTP 70
TL+ ++F+ G F+ LLG+FPL MF++T+I RER SGTLER+L P
Sbjct 57 TLLRYVFD------GAAGTFDGIGASLLGIFPLITMFLVTSIATLRERTSGTLERLLALP 110
Query 71 LRRLDLLAGYGTAFSIAAAAQATLACIVAFWFLGFDTAGSPVWVFAIAIVNAVLGVGLGL 130
L + DL+AGY AF AA Q+ LA V+ W LG D GSP + +A+++A+LG LGL
Sbjct 111 LGKGDLIAGYALAFGAVAALQSALATAVSIWLLGLDVVGSPWLLLLVALLDALLGTALGL 170
Query 131 LCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMPTWLEWISNVMPASYALEALQQVG 190
SAFA +EFQAVQF+P V+ PQLLL G+ VPR M LE ISNV+P SYA++ + QV
Sbjct 171 FVSAFAASEFQAVQFMPAVIFPQLLLCGLFVPREAMHPVLEAISNVLPMSYAVDGMNQVL 230
Query 191 AHPELTGIAVRDVVVVLSFAVASLCLAAVTLRRRT 225
HP++TG VRD+ VV A+ LCL A+TLRRRT
Sbjct 231 HHPDITGDFVRDIAVVAGSALLVLCLGAITLRRRT 265
>gi|159038943|ref|YP_001538196.1| multidrug ABC transporter inner membrane protein [Salinispora
arenicola CNS-205]
gi|157917778|gb|ABV99205.1| ABC drug efflux pump, inner membrane subunit, DrrB family [Salinispora
arenicola CNS-205]
Length=251
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 120/213 (57%), Positives = 151/213 (71%), Gaps = 0/213 (0%)
Query 14 YFMFENVPHRPGTPSGFNTACLVLLGLFPLFVMFVITAITMQRERASGTLERILTTPLRR 73
Y+M+ + P PG P+ F+ LVLLG FP +MF++T+I M RER SGTLER+LTTPL +
Sbjct 39 YYMYVDQPTPPGQPAPFDRIALVLLGFFPFIIMFLVTSIAMLRERTSGTLERLLTTPLGK 98
Query 74 LDLLAGYGTAFSIAAAAQATLACIVAFWFLGFDTAGSPVWVFAIAIVNAVLGVGLGLLCS 133
LDLL GYG AF +AA QA +A VA+W DTAGS V IA VNAVL V LGL CS
Sbjct 99 LDLLFGYGIAFGLAAIVQAAVATAVAYWLFDLDTAGSSGLVILIAAVNAVLAVALGLFCS 158
Query 134 AFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMPTWLEWISNVMPASYALEALQQVGAHP 193
AFARTEFQAVQF+P+V+ PQLLL G+ VPR M WL+ +S+V+P SY++EALQ+VG+
Sbjct 159 AFARTEFQAVQFMPVVVAPQLLLCGLFVPRDEMAGWLQVVSDVLPLSYSVEALQEVGSTA 218
Query 194 ELTGIAVRDVVVVLSFAVASLCLAAVTLRRRTS 226
E T R++ +V V +L LAA TLRRR+
Sbjct 219 EPTATMWRNLAIVGGATVLALVLAAATLRRRSG 251
>gi|297192884|ref|ZP_06910282.1| ABC transporter permease [Streptomyces pristinaespiralis ATCC
25486]
gi|197722602|gb|EDY66510.1| ABC transporter permease [Streptomyces pristinaespiralis ATCC
25486]
Length=258
Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 112/226 (50%), Positives = 153/226 (68%), Gaps = 6/226 (2%)
Query 1 MILLVPILIITLMYFMFENVPHRPGTPSGFNTACLVLLGLFPLFVMFVITAITMQRERAS 60
++LLVP L++ L+ F+F+ G+P F++ LLG+FPL MF++T+I RER S
Sbjct 39 LMLLVPCLMLFLLRFVFD------GSPGTFDSIGASLLGIFPLITMFLVTSIATLRERTS 92
Query 61 GTLERILTTPLRRLDLLAGYGTAFSIAAAAQATLACIVAFWFLGFDTAGSPVWVFAIAIV 120
GTLER+L PL + DL+AGY AF + A Q+ LA +A W LG D GSP + +A++
Sbjct 93 GTLERLLAMPLGKADLIAGYALAFGLVAVIQSLLATGLALWVLGLDIVGSPWLLLLVALL 152
Query 121 NAVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMPTWLEWISNVMPAS 180
+A+LG LGL SAFA +EFQAVQF+P V+ PQLLL G+ PR M LE IS+V+P S
Sbjct 153 DALLGTALGLFVSAFAASEFQAVQFMPAVIFPQLLLCGLFAPRDTMQPVLEAISDVLPMS 212
Query 181 YALEALQQVGAHPELTGIAVRDVVVVLSFAVASLCLAAVTLRRRTS 226
YA++A+ +V HP++TG VRDV+VV A+ L L A TLRRRT+
Sbjct 213 YAVDAMSEVLRHPDVTGDFVRDVLVVAVCALVVLALGAATLRRRTA 258
>gi|258650825|ref|YP_003199981.1| ABC transporter [Nakamurella multipartita DSM 44233]
gi|258554050|gb|ACV76992.1| ABC-2 type transporter [Nakamurella multipartita DSM 44233]
Length=247
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 116/225 (52%), Positives = 153/225 (68%), Gaps = 7/225 (3%)
Query 1 MILLVPILIITLMYFMFENVPHRPGTPSGFNTACLVLLGLFPLFVMFVITAITMQRERAS 60
+++ VPI+++ L+Y M++ P + L++LG+FP +MF+IT+I M RER S
Sbjct 29 LLIAVPIVLMGLVYAMYDGSP-------AVSRILLIMLGIFPFVIMFLITSIAMLRERTS 81
Query 61 GTLERILTTPLRRLDLLAGYGTAFSIAAAAQATLACIVAFWFLGFDTAGSPVWVFAIAIV 120
GTLER++TT + DLLAGYG AF AAA QA +A A+W G TAGS V IA++
Sbjct 82 GTLERLMTTRTGKGDLLAGYGIAFGAAAAGQAVIASACAYWLYGMSTAGSAALVVLIAVL 141
Query 121 NAVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMPTWLEWISNVMPAS 180
A+LGVGLGL CSA ARTEFQAVQ +P+V++PQ+LL G+ VPRA M WL +S+VMP S
Sbjct 142 TALLGVGLGLACSALARTEFQAVQMLPVVVIPQILLCGLFVPRAEMAGWLSALSDVMPLS 201
Query 181 YALEALQQVGAHPELTGIAVRDVVVVLSFAVASLCLAAVTLRRRT 225
YA+EALQQVG + E T D+ VV + L LAA +LRRRT
Sbjct 202 YAVEALQQVGDNAEPTSTFWVDLAVVGGCVILGLILAAASLRRRT 246
>gi|29831266|ref|NP_825900.1| ABC transporter permease [Streptomyces avermitilis MA-4680]
gi|29608381|dbj|BAC72435.1| putative ABC transporter permease protein [Streptomyces avermitilis
MA-4680]
Length=263
Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 104/225 (47%), Positives = 149/225 (67%), Gaps = 6/225 (2%)
Query 1 MILLVPILIITLMYFMFENVPHRPGTPSGFNTACLVLLGLFPLFVMFVITAITMQRERAS 60
+++L+P +++ L+ ++F+ G+P F++ LLG+FPL MF++T+I RER S
Sbjct 44 LMILIPCVMLFLLRYVFD------GSPRTFDSIGASLLGIFPLITMFLVTSIATLRERTS 97
Query 61 GTLERILTTPLRRLDLLAGYGTAFSIAAAAQATLACIVAFWFLGFDTAGSPVWVFAIAIV 120
GTLER+L PL + DL+AGY AF A Q+ LA +A WFLG D GSP + +A++
Sbjct 98 GTLERLLAMPLGKGDLIAGYALAFGALAIIQSALATGLAVWFLGLDVTGSPWLLLLVALL 157
Query 121 NAVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMPTWLEWISNVMPAS 180
+A+LG LGL SAFA +EFQAVQF+P V+ PQLLL G+ PR+ M LE IS+V+P S
Sbjct 158 DALLGTALGLFVSAFASSEFQAVQFMPAVIFPQLLLCGLFTPRSAMHPALEAISDVLPMS 217
Query 181 YALEALQQVGAHPELTGIAVRDVVVVLSFAVASLCLAAVTLRRRT 225
YA++ + +V H ++T VRD ++V A+ L L A TLRRRT
Sbjct 218 YAVDGMNEVLKHTDMTATFVRDALIVAGCALLVLTLGAATLRRRT 262
>gi|302553221|ref|ZP_07305563.1| ABC transporter [Streptomyces viridochromogenes DSM 40736]
gi|302470839|gb|EFL33932.1| ABC transporter [Streptomyces viridochromogenes DSM 40736]
Length=267
Score = 185 bits (470), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 105/226 (47%), Positives = 149/226 (66%), Gaps = 6/226 (2%)
Query 1 MILLVPILIITLMYFMFENVPHRPGTPSGFNTACLVLLGLFPLFVMFVITAITMQRERAS 60
+++L+P +++ L+ ++F+ G+P F++ LLG+FPL MF++T+I RER S
Sbjct 48 LLILIPCVMLFLLRYVFD------GSPRTFDSIGASLLGIFPLITMFLVTSIATLRERTS 101
Query 61 GTLERILTTPLRRLDLLAGYGTAFSIAAAAQATLACIVAFWFLGFDTAGSPVWVFAIAIV 120
GTLER+L PL + DL+AGY AF A Q+ LA +A WFLG D GSP + +A++
Sbjct 102 GTLERLLAMPLGKGDLIAGYALAFGTLAIIQSALATGLAVWFLGLDVTGSPWLLLLVALL 161
Query 121 NAVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMPTWLEWISNVMPAS 180
+A+LG LGL SAFA +EFQAVQF+P V+ PQLLL G+ PR M LE IS+V+P S
Sbjct 162 DALLGTALGLFVSAFAASEFQAVQFMPAVIFPQLLLCGLFTPRDNMHPALEAISDVLPMS 221
Query 181 YALEALQQVGAHPELTGIAVRDVVVVLSFAVASLCLAAVTLRRRTS 226
YA++ + +V H ++T VRD +VV A+ L L A TLRRRT+
Sbjct 222 YAVDGMNEVLRHTDMTATFVRDALVVAGCALLVLVLGAATLRRRTA 267
>gi|302559247|ref|ZP_07311589.1| DrrB family ABC transporter efflux protein [Streptomyces griseoflavus
Tu4000]
gi|302476865|gb|EFL39958.1| DrrB family ABC transporter efflux protein [Streptomyces griseoflavus
Tu4000]
Length=254
Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 106/226 (47%), Positives = 148/226 (66%), Gaps = 6/226 (2%)
Query 1 MILLVPILIITLMYFMFENVPHRPGTPSGFNTACLVLLGLFPLFVMFVITAITMQRERAS 60
++LLVP L++ L+ ++++ PH F+ LLG+FPL MF++T+I RER S
Sbjct 35 LMLLVPCLMLFLLRYVYDGSPHV------FDNIGASLLGVFPLITMFLVTSIATLRERTS 88
Query 61 GTLERILTTPLRRLDLLAGYGTAFSIAAAAQATLACIVAFWFLGFDTAGSPVWVFAIAIV 120
GTLER+L PL + DL+AGY AF A Q+ LA +A WFLG D GSP + +A++
Sbjct 89 GTLERLLAMPLGKGDLIAGYALAFGTLAIIQSALATGLAVWFLGLDVIGSPWLLLLVALL 148
Query 121 NAVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMPTWLEWISNVMPAS 180
+A+LG LGL SAFA +EFQAVQF+P V+ PQLLL G+ PR M LE +S+V+P S
Sbjct 149 DALLGTALGLFVSAFAASEFQAVQFMPAVIFPQLLLCGLFTPRDSMHPVLETLSDVLPMS 208
Query 181 YALEALQQVGAHPELTGIAVRDVVVVLSFAVASLCLAAVTLRRRTS 226
YA++A+ +V HP++T V D +VV A+ L L A TL+RRT+
Sbjct 209 YAVDAMNEVVRHPDMTTAFVLDALVVAGCALLVLILGAATLKRRTA 254
>gi|302529848|ref|ZP_07282190.1| hypothetical protein SSMG_06230 [Streptomyces sp. AA4]
gi|302438743|gb|EFL10559.1| hypothetical protein SSMG_06230 [Streptomyces sp. AA4]
Length=244
Score = 183 bits (465), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 105/225 (47%), Positives = 143/225 (64%), Gaps = 7/225 (3%)
Query 1 MILLVPILIITLMYFMFENVPHRPGTPSGFNTACLVLLGLFPLFVMFVITAITMQRERAS 60
M++LVP L++ L+ F+F + F+ LLG+FP +MF+I +IT RER +
Sbjct 26 MLILVPTLLMVLLRFVFNSA-------EVFSRIAPALLGVFPFVIMFLIASITTLRERTA 78
Query 61 GTLERILTTPLRRLDLLAGYGTAFSIAAAAQATLACIVAFWFLGFDTAGSPVWVFAIAIV 120
GTLER++T PL + DLLAGY AF + A Q +A V+ W+LG AGS + I +
Sbjct 79 GTLERLMTLPLGKFDLLAGYALAFGLVAVLQVAVATAVSLWWLGLTVAGSVWSLLLITAL 138
Query 121 NAVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMPTWLEWISNVMPAS 180
+A+LG+ LGL SAFA +EFQAVQF+PL ++PQ LL G+ PR M L W+S+VMP S
Sbjct 139 DALLGMALGLFVSAFATSEFQAVQFMPLFVLPQALLCGLFQPRDQMGWVLHWLSDVMPLS 198
Query 181 YALEALQQVGAHPELTGIAVRDVVVVLSFAVASLCLAAVTLRRRT 225
YA+EAL QV T R++++VL AV +L L A TLRRRT
Sbjct 199 YAVEALTQVTHSSAWTTSLTRNILIVLGCAVLALGLGAATLRRRT 243
>gi|297201459|ref|ZP_06918856.1| ABC transporter permease [Streptomyces sviceus ATCC 29083]
gi|197713867|gb|EDY57901.1| ABC transporter permease [Streptomyces sviceus ATCC 29083]
Length=261
Score = 181 bits (460), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 103/226 (46%), Positives = 148/226 (66%), Gaps = 6/226 (2%)
Query 1 MILLVPILIITLMYFMFENVPHRPGTPSGFNTACLVLLGLFPLFVMFVITAITMQRERAS 60
M++L+P +++ L+ ++F+ G+P F++ LLG+FPL MF++T+I RER S
Sbjct 42 MMILIPCVMLFLLRYVFD------GSPRTFDSIGASLLGIFPLITMFLVTSIATLRERTS 95
Query 61 GTLERILTTPLRRLDLLAGYGTAFSIAAAAQATLACIVAFWFLGFDTAGSPVWVFAIAIV 120
GTLER+L PL + DL+AGY AF A Q+ LA +A W LG D GSP + +A++
Sbjct 96 GTLERLLAMPLGKGDLIAGYALAFGTLAIIQSALATGLAVWTLGLDVTGSPWLLLLVALL 155
Query 121 NAVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMPTWLEWISNVMPAS 180
+A+LG LGL SAFA +EFQAVQF+P V+ PQLLL G+ PR M LE +S+V+P S
Sbjct 156 DALLGTALGLFVSAFAASEFQAVQFMPAVIFPQLLLCGLFTPRDNMHPVLETLSDVLPMS 215
Query 181 YALEALQQVGAHPELTGIAVRDVVVVLSFAVASLCLAAVTLRRRTS 226
YA++ + +V H ++T VRD ++V A+ L L A TLRRRT+
Sbjct 216 YAVDGMNEVLRHTDMTATFVRDALIVAGCALLVLGLGAATLRRRTA 261
>gi|290958372|ref|YP_003489554.1| ABC transporter [Streptomyces scabiei 87.22]
gi|260647898|emb|CBG71003.1| putative ABC transporter subunit [Streptomyces scabiei 87.22]
Length=262
Score = 181 bits (458), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 101/226 (45%), Positives = 149/226 (66%), Gaps = 6/226 (2%)
Query 1 MILLVPILIITLMYFMFENVPHRPGTPSGFNTACLVLLGLFPLFVMFVITAITMQRERAS 60
+++L+P +++ L+ ++F+ G+P F++ LLG+FPL MF++T+I RER S
Sbjct 43 LLILIPCVMLFLLRYVFD------GSPRVFDSIGASLLGIFPLITMFLVTSIATLRERTS 96
Query 61 GTLERILTTPLRRLDLLAGYGTAFSIAAAAQATLACIVAFWFLGFDTAGSPVWVFAIAIV 120
GTLER+L+ PL + DL+AGY AF A Q+ LA +A WFL D GSP + +A++
Sbjct 97 GTLERLLSMPLGKGDLIAGYALAFGTLAVIQSALATGLAVWFLDLDVTGSPWLLLVVALL 156
Query 121 NAVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMPTWLEWISNVMPAS 180
+A+LG LGL SAFA +E+QAVQF+P V+ PQLLL G+ R+ M LE IS+V+P S
Sbjct 157 DALLGTALGLFVSAFASSEYQAVQFMPAVIFPQLLLCGLFTARSAMHPALEAISDVLPMS 216
Query 181 YALEALQQVGAHPELTGIAVRDVVVVLSFAVASLCLAAVTLRRRTS 226
YA++ + +V H ++T VRD+ +V A+ L L A TLRRRT+
Sbjct 217 YAVDGMNEVLLHTDMTATFVRDIAIVAGCALLVLTLGAATLRRRTT 262
>gi|256394707|ref|YP_003116271.1| ABC transporter [Catenulispora acidiphila DSM 44928]
gi|256360933|gb|ACU74430.1| ABC-2 type transporter [Catenulispora acidiphila DSM 44928]
Length=240
Score = 181 bits (458), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 104/227 (46%), Positives = 145/227 (64%), Gaps = 8/227 (3%)
Query 1 MILLVPILIITLMYFMFENVPHRPGTPSGFNTACLVLLGLFPLFVMFVITAITMQRERAS 60
++L++P ++I+L+ ++F+ PH F + LLG+FP VMF++T++ M RER S
Sbjct 21 LMLVMPCVLISLLKWVFDASPHV------FQSIGAALLGIFPFIVMFLVTSVGMLRERTS 74
Query 61 GTLERILTTPLRRLDLLAGYGTAFSIAAAAQATLACIVAFWFLGFDTAGSPVW-VFAIAI 119
GTLER+LT PL + DLL GY AF A QA L + LG AG P W V +A+
Sbjct 75 GTLERLLTMPLAKGDLLGGYALAFGAVALLQAVLISALTIGPLGLSVAG-PAWAVVLVAV 133
Query 120 VNAVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMPTWLEWISNVMPA 179
++A+LG LGL SAFARTEFQAVQF+P ++PQ LL G+ PR M T L W S+VMP
Sbjct 134 LDALLGTALGLFTSAFARTEFQAVQFLPAFVLPQFLLCGLFTPRDQMQTVLRWASDVMPL 193
Query 180 SYALEALQQVGAHPELTGIAVRDVVVVLSFAVASLCLAAVTLRRRTS 226
SYA++A+ ++ +H +TG V D+ ++ V +L L A TLRRRT
Sbjct 194 SYAVDAMDKITSHAAVTGGLVADMAIIAGAGVLALALGAATLRRRTE 240
>gi|333921260|ref|YP_004494841.1| putative ABC transporter efflux protein, DrrB family [Amycolicicoccus
subflavus DQS3-9A1]
gi|333483481|gb|AEF42041.1| Putative ABC transporter efflux protein, DrrB family [Amycolicicoccus
subflavus DQS3-9A1]
Length=245
Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 96/199 (49%), Positives = 129/199 (65%), Gaps = 7/199 (3%)
Query 1 MILLVPILIITLMYFMFENVPHRPGTPSGFNTACLVLLGLFPLFVMFVITAITMQRERAS 60
MIL +P ++T++Y+M+ + P F + ++LG+ P VMF+IT+I M RER S
Sbjct 26 MILFLPSFLLTILYYMYRD------NPLLFQSIATIMLGILPFVVMFLITSIAMLRERTS 79
Query 61 GTLERILTTPLRRLDLLAGYGTAFSIAAAAQATLACIVAFWFLGFDTAGSPVWVFAIAIV 120
GTLER++ +PL +LDLL GYG AF +AAA QA + V +W V IA+V
Sbjct 80 GTLERLMASPLNKLDLLFGYGVAFGLAAAGQALVTITVVYWAFDVRPTAGVFLVVVIALV 139
Query 121 NAVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMPTWLEWISNVMPAS 180
NA LGV LGL SAFARTEFQAVQF+PLV +PQ+LL G+ VPR M L+ IS+ +P +
Sbjct 140 NAALGVALGLFTSAFARTEFQAVQFMPLVAMPQILLCGLFVPRDQMAVVLQGISDALPLT 199
Query 181 YALEALQQV-GAHPELTGI 198
Y +EALQ++ A P T I
Sbjct 200 YGVEALQEIASATPSYTTI 218
>gi|229822111|ref|YP_002883637.1| ABC-2 type transporter [Beutenbergia cavernae DSM 12333]
gi|229568024|gb|ACQ81875.1| ABC-2 type transporter [Beutenbergia cavernae DSM 12333]
Length=241
Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 105/226 (47%), Positives = 145/226 (65%), Gaps = 5/226 (2%)
Query 1 MILLVPILIITLMYFMFENVPHRPGTPSGFNTACLVLLGLFPLFVMFVITAITMQRERAS 60
M+L+VP L++TL+++MF++ PG F A LL +FPL +MF+IT++ RER +
Sbjct 21 MVLVVPCLLMTLLWWMFQD---SPGGEQIFTAAAPALLAMFPLLIMFLITSVATLRERTT 77
Query 61 GTLERILTTPLRRLDLLAGYGTAFSIAAAAQATLACIVAFWFLGFDTAGSPVWVFAIAIV 120
GTLER+LT PL R L+ GY AF + A QA + L FD AG + +A +
Sbjct 78 GTLERLLTLPLSRGGLIGGYALAFGLVAVVQAAAVSALLIGALDFDPAGPFFLLLGVAAL 137
Query 121 NAVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMPTWLEWISNVMPAS 180
+AVLGV LGL SAFARTEFQAVQF+P ++VPQLLL G+ VPR +P LE ISN +P S
Sbjct 138 DAVLGVALGLFVSAFARTEFQAVQFMPAILVPQLLLCGLFVPRGDLPPVLEVISNALPLS 197
Query 181 YALEALQQVGAHPELTGIAVRDVVVVLSFAVASLCLAAVTLRRRTS 226
YA++A+ +V E +A V ++ +F V L L ++TLRRR+
Sbjct 198 YAVDAITEVSTQAEPDILA--QVGILAAFTVGVLVLGSLTLRRRSD 241
>gi|145295590|ref|YP_001138411.1| hypothetical protein cgR_1517 [Corynebacterium glutamicum R]
gi|140845510|dbj|BAF54509.1| hypothetical protein [Corynebacterium glutamicum R]
gi|344045088|gb|EGV40762.1| ABC-type multidrug transport system, permease component [Corynebacterium
glutamicum S9114]
Length=247
Score = 178 bits (451), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 100/232 (44%), Positives = 152/232 (66%), Gaps = 18/232 (7%)
Query 1 MILLVPILIITLMYFMFENVPHRPGTPSG---FNTACLVLLGLFPLFVMFVITAITMQRE 57
+ILL P+ +++L Y+M+ + TP+G F T V++ +FPL +MF++T++TMQRE
Sbjct 26 LILLAPVALMSLFYYMYSS------TPAGTQLFKTISTVMVAVFPLMLMFLMTSVTMQRE 79
Query 58 RASGTLERILTTPLRRLDLLAGYGTAFSIAAAAQATLACIVAFWFLGFDTAGSPVWVFA- 116
R +GTLER+ TT + R+DL+ GYG AF I A AQ+ L + + LG +T S W+
Sbjct 80 RNAGTLERLWTTNIHRVDLIGGYGVAFGIMAVAQSLLMVLTLRYLLGVETE-SEWWISTL 138
Query 117 IAIVNAVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMPTWLEWISNV 176
IA + ++GV LGLL SAFA TEFQA+Q +PL+++PQ LL G+++PR +P L W+SNV
Sbjct 139 IAAITGLIGVSLGLLSSAFASTEFQAIQTLPLLILPQFLLCGLLIPRDDLPDVLRWVSNV 198
Query 177 MPASYALEALQQVGAHPELTGIA---VRDVVVVLSFAVASLCLAAVTLRRRT 225
+P SYA++A TGI V ++ + +FAV L +AA+++ R+T
Sbjct 199 LPLSYAVDA----ALEASRTGIGQQVVVNIAICAAFAVGFLLVAALSMPRKT 246
>gi|326328726|ref|ZP_08195064.1| ABC transporter efflux protein, DrrB family [Nocardioidaceae
bacterium Broad-1]
gi|325953469|gb|EGD45471.1| ABC transporter efflux protein, DrrB family [Nocardioidaceae
bacterium Broad-1]
Length=442
Score = 178 bits (451), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 107/225 (48%), Positives = 149/225 (67%), Gaps = 6/225 (2%)
Query 1 MILLVPILIITLMYFMFENVPHRPGTPSGFNTACLVLLGLFPLFVMFVITAITMQRERAS 60
M++++P L++TL+++M+E P P F+ LL +FP VMF++T++T RER+S
Sbjct 223 MLVVLPTLLMTLLWWMYEESP----API-FDRIGPALLAIFPFIVMFLVTSVTTLRERSS 277
Query 61 GTLERILTTPLRRLDLLAGYGTAFSIAAAAQATLACIVAFWFLGFDTAGSPVWVFAIAIV 120
GTLER+L PL + D L GY AF + AA Q+ +A V+ LG D GS + +AIV
Sbjct 278 GTLERLLAMPLGKGDFLLGYALAFGLLAAVQSGVAVAVSVGLLGLDITGSVALLVVVAIV 337
Query 121 NAVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMPTWLEWISNVMPAS 180
+AVLG LGLL SAFA TEFQAVQF+P ++VPQ+LL G++VPR +P LE IS+V+P S
Sbjct 338 DAVLGTALGLLVSAFATTEFQAVQFMPAIVVPQILLCGLLVPRDSLPGVLEAISDVLPLS 397
Query 181 YALEALQQVGAHPELTGIAVRDVVVVLSFAVASLCLAAVTLRRRT 225
YA++A+ + + TG D+ VV F VA L L + TLRRRT
Sbjct 398 YAVDAMTHLVTSAD-TGEVWTDLAVVGGFVVAGLALGSATLRRRT 441
>gi|325068585|ref|ZP_08127258.1| DrrB family ABC transporter [Actinomyces oris K20]
Length=248
Score = 177 bits (450), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 96/225 (43%), Positives = 145/225 (65%), Gaps = 3/225 (1%)
Query 1 MILLVPILIITLMYFMFENVPHRPGTPSGFNTACLVLLGLFPLFVMFVITAITMQRERAS 60
+I +VP ++TL+YF++ + P G FN + ++ + P VMF++T++ M RER S
Sbjct 26 LIAIVPAALLTLLYFVYRDYP---GADLIFNHIAVSMMAILPTTVMFLVTSVAMLRERVS 82
Query 61 GTLERILTTPLRRLDLLAGYGTAFSIAAAAQATLACIVAFWFLGFDTAGSPVWVFAIAIV 120
GTLER+ TTP+ R DLL GY TAF++ A Q+ + C VA W L D + S WV A+V
Sbjct 83 GTLERLWTTPIHRADLLFGYATAFALTAVIQSLILCAVAAWGLDVDISASWGWVVLTALV 142
Query 121 NAVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMPTWLEWISNVMPAS 180
+A +GV LGLL SAFARTEFQAVQF+P+V+ PQL L G++V R +P LE + + +P S
Sbjct 143 DAFVGVSLGLLVSAFARTEFQAVQFMPVVIAPQLFLCGLLVSRDQLPRALEVVGDALPMS 202
Query 181 YALEALQQVGAHPELTGIAVRDVVVVLSFAVASLCLAAVTLRRRT 225
+A++A+ ++ E + R + ++ F + L +AA T+ R+T
Sbjct 203 WAVDAVTELTTSSEPSDDFFRYLAYLVCFGLVVLGVAASTVPRKT 247
>gi|19552671|ref|NP_600673.1| ABC-type transporter, permease component [Corynebacterium glutamicum
ATCC 13032]
gi|62390339|ref|YP_225741.1| ABC-type multidrug transport system, permease component [Corynebacterium
glutamicum ATCC 13032]
gi|21324224|dbj|BAB98849.1| ABC-type transporter, permease components [Corynebacterium glutamicum
ATCC 13032]
gi|41325676|emb|CAF21465.1| ABC-type multidrug transport system, permease component [Corynebacterium
glutamicum ATCC 13032]
Length=247
Score = 177 bits (448), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 100/229 (44%), Positives = 151/229 (66%), Gaps = 12/229 (5%)
Query 1 MILLVPILIITLMYFMFENVPHRPGTPSGFNTACLVLLGLFPLFVMFVITAITMQRERAS 60
+ILL P+ +++L Y+M+ + P GT F T V++ +FPL +MF++T++TMQRER +
Sbjct 26 LILLAPVALMSLFYYMYSSTP--AGT-QLFKTISTVMIAVFPLMLMFLMTSVTMQRERNA 82
Query 61 GTLERILTTPLRRLDLLAGYGTAFSIAAAAQATLACIVAFWFLGFDTAGSPVWVFA-IAI 119
GTLER+ TT + R+DL+ GYG AF I A AQ+ L + + LG +T S W+ IA
Sbjct 83 GTLERLWTTNIHRVDLIGGYGVAFGIMAVAQSLLMVLTLRYLLGVETE-SEWWISTLIAA 141
Query 120 VNAVLGVGLGLLCSAFARTEFQAVQFIPLVMVPQLLLAGIIVPRALMPTWLEWISNVMPA 179
+ ++GV LGLL SAFA TEFQA+Q +PL+++PQ LL G+++PR +P L W+SNV+P
Sbjct 142 ITGLIGVSLGLLSSAFASTEFQAIQTLPLLILPQFLLCGLLIPRDDLPDVLRWVSNVLPL 201
Query 180 SYALEALQQVGAHPELTGIA---VRDVVVVLSFAVASLCLAAVTLRRRT 225
SYA++A TGI V ++ + +FAV+ L +AA+++ R T
Sbjct 202 SYAVDA----ALEASRTGIGQQVVVNIAICAAFAVSFLLVAALSMPRMT 246
Lambda K H
0.331 0.141 0.431
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 287912302678
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40