BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1687c
Length=255
Score E
Sequences producing significant alignments: (Bits) Value
gi|15608825|ref|NP_216203.1| ABC transporter ATP-binding protein... 506 2e-141
gi|289574355|ref|ZP_06454582.1| ABC transporter ATP-binding prot... 505 3e-141
gi|289447301|ref|ZP_06437045.1| ABC transporter ATP-binding prot... 503 7e-141
gi|289554540|ref|ZP_06443750.1| ABC transporter ATP-binding prot... 503 1e-140
gi|289443144|ref|ZP_06432888.1| ABC transporter ATP-binding prot... 489 1e-136
gi|240170134|ref|ZP_04748793.1| putative ATP-binding protein ABC... 447 5e-124
gi|289750243|ref|ZP_06509621.1| ABC transporter ATP-binding prot... 402 4e-110
gi|289569735|ref|ZP_06449962.1| ABC transporter ATP-binding prot... 388 4e-106
gi|118462742|ref|YP_882269.1| ABC transporter ATP-binding protei... 383 2e-104
gi|41407491|ref|NP_960327.1| hypothetical protein MAP1393c [Myco... 380 1e-103
gi|254819733|ref|ZP_05224734.1| hypothetical protein MintA_07409... 377 7e-103
gi|296164584|ref|ZP_06847152.1| antibiotic resistance ABC superf... 367 7e-100
gi|336457845|gb|EGO36839.1| ABC-type multidrug transport system,... 362 2e-98
gi|342860736|ref|ZP_08717386.1| hypothetical protein MCOL_17733 ... 359 2e-97
gi|254775537|ref|ZP_05217053.1| hypothetical protein MaviaA2_128... 357 7e-97
gi|108799923|ref|YP_640120.1| ABC transporter-like protein [Myco... 355 4e-96
gi|126435551|ref|YP_001071242.1| ABC transporter-like protein [M... 353 1e-95
gi|333990485|ref|YP_004523099.1| antibiotic resistance ABC trans... 351 6e-95
gi|120404271|ref|YP_954100.1| ABC transporter--like protein [Myc... 350 9e-95
gi|183982500|ref|YP_001850791.1| antibiotic resistance ABC trans... 349 2e-94
gi|118617298|ref|YP_905630.1| antibiotic resistance ABC transpor... 344 7e-93
gi|118469618|ref|YP_888056.1| ABC transporter ATP-binding protei... 330 1e-88
gi|226360089|ref|YP_002777867.1| ABC transporter ATP-binding pro... 281 4e-74
gi|111017958|ref|YP_700930.1| ABC transporter ATP-binding protei... 279 3e-73
gi|325674260|ref|ZP_08153949.1| ABC superfamily ATP binding cass... 273 2e-71
gi|54023957|ref|YP_118199.1| putative ABC transporter ATP-bindin... 273 2e-71
gi|312139863|ref|YP_004007199.1| ABC transporter ATPase [Rhodoco... 273 2e-71
gi|84494997|ref|ZP_00994116.1| putative ABC transporter ATP-bind... 268 7e-70
gi|229492686|ref|ZP_04386487.1| ABC transporter ATP-binding prot... 266 2e-69
gi|226306759|ref|YP_002766719.1| ABC transporter ATP-binding pro... 264 1e-68
gi|159038942|ref|YP_001538195.1| ABC transporter-like protein [S... 258 4e-67
gi|302868882|ref|YP_003837519.1| ABC transporter-like protein [M... 258 8e-67
gi|145595692|ref|YP_001159989.1| ABC transporter-like protein [S... 257 1e-66
gi|302529847|ref|ZP_07282189.1| nodulation ABC transporter NodI ... 256 2e-66
gi|258650826|ref|YP_003199982.1| ABC transporter [Nakamurella mu... 255 4e-66
gi|238060210|ref|ZP_04604919.1| ABC transporter related [Micromo... 254 6e-66
gi|117928574|ref|YP_873125.1| ABC transporter-like protein [Acid... 251 7e-65
gi|330469255|ref|YP_004406998.1| ABC transporter-like protein [V... 251 8e-65
gi|317123779|ref|YP_004097891.1| ABC transporter [Intrasporangiu... 248 6e-64
gi|289770948|ref|ZP_06530326.1| ABC transporter ATP-binding prot... 243 2e-62
gi|332669396|ref|YP_004452404.1| ABC transporter-like protein [C... 243 2e-62
gi|21221769|ref|NP_627548.1| ABC transporter ATP-binding subunit... 242 4e-62
gi|284034270|ref|YP_003384201.1| ABC transporter-like protein [K... 242 5e-62
gi|269976993|ref|ZP_06183967.1| ABC transporter ATP-binding prot... 242 5e-62
gi|306819383|ref|ZP_07453090.1| ABC superfamily ATP binding cass... 241 6e-62
gi|269955225|ref|YP_003325014.1| ABC transporter-like protein [X... 240 2e-61
gi|227876107|ref|ZP_03994225.1| ABC superfamily ATP binding cass... 240 2e-61
gi|307701687|ref|ZP_07638703.1| ABC transporter, ATP-binding pro... 239 2e-61
gi|333921259|ref|YP_004494840.1| ABC transporter-like protein [A... 239 2e-61
gi|297201458|ref|ZP_06918855.1| nodulation ABC transporter NodI ... 239 4e-61
>gi|15608825|ref|NP_216203.1| ABC transporter ATP-binding protein [Mycobacterium tuberculosis
H37Rv]
gi|15841144|ref|NP_336181.1| antibiotic resistance ABC transporter, efflux system, ATP-binding
protein [Mycobacterium tuberculosis CDC1551]
gi|31792873|ref|NP_855366.1| ABC transporter ATP-binding protein [Mycobacterium bovis AF2122/97]
66 more sequence titles
Length=255
Score = 506 bits (1302), Expect = 2e-141, Method: Compositional matrix adjust.
Identities = 255/255 (100%), Positives = 255/255 (100%), Gaps = 0/255 (0%)
Query 1 MMISSSDELLRDGADPAVIIDQLRVIRGKRLALQDVSVRVACGTITGLLGPSGSGKTTLI 60
MMISSSDELLRDGADPAVIIDQLRVIRGKRLALQDVSVRVACGTITGLLGPSGSGKTTLI
Sbjct 1 MMISSSDELLRDGADPAVIIDQLRVIRGKRLALQDVSVRVACGTITGLLGPSGSGKTTLI 60
Query 61 RCIVGSQIIASGSVSVLGQPAGSAELRHRVGYMPQDPTIYNDLRVIDNIRYFAELCGVDR 120
RCIVGSQIIASGSVSVLGQPAGSAELRHRVGYMPQDPTIYNDLRVIDNIRYFAELCGVDR
Sbjct 61 RCIVGSQIIASGSVSVLGQPAGSAELRHRVGYMPQDPTIYNDLRVIDNIRYFAELCGVDR 120
Query 121 QAADEVIEAVDLRDHRTARCANLSGGQRARVSLACALVGRPDLLVLDEPTIGLDPVLRVE 180
QAADEVIEAVDLRDHRTARCANLSGGQRARVSLACALVGRPDLLVLDEPTIGLDPVLRVE
Sbjct 121 QAADEVIEAVDLRDHRTARCANLSGGQRARVSLACALVGRPDLLVLDEPTIGLDPVLRVE 180
Query 181 LWDRFTALARRGTTLLVSSHVMDEADRCGDLLLLRQGQLLAHTTPHRLRKETGCTSLEEA 240
LWDRFTALARRGTTLLVSSHVMDEADRCGDLLLLRQGQLLAHTTPHRLRKETGCTSLEEA
Sbjct 181 LWDRFTALARRGTTLLVSSHVMDEADRCGDLLLLRQGQLLAHTTPHRLRKETGCTSLEEA 240
Query 241 FLSIVRRTTTVPAAG 255
FLSIVRRTTTVPAAG
Sbjct 241 FLSIVRRTTTVPAAG 255
>gi|289574355|ref|ZP_06454582.1| ABC transporter ATP-binding protein [Mycobacterium tuberculosis
K85]
gi|339631741|ref|YP_004723383.1| ABC transporter ATP-binding protein [Mycobacterium africanum
GM041182]
gi|289538786|gb|EFD43364.1| ABC transporter ATP-binding protein [Mycobacterium tuberculosis
K85]
gi|339331097|emb|CCC26775.1| putative conserved ATP-binding protein ABC transporter [Mycobacterium
africanum GM041182]
Length=255
Score = 505 bits (1300), Expect = 3e-141, Method: Compositional matrix adjust.
Identities = 254/255 (99%), Positives = 255/255 (100%), Gaps = 0/255 (0%)
Query 1 MMISSSDELLRDGADPAVIIDQLRVIRGKRLALQDVSVRVACGTITGLLGPSGSGKTTLI 60
MMISSSDELLRDGADPAVIIDQLRVIRGKRLALQDVSVRVACGTITGLLGPSGSGKTTLI
Sbjct 1 MMISSSDELLRDGADPAVIIDQLRVIRGKRLALQDVSVRVACGTITGLLGPSGSGKTTLI 60
Query 61 RCIVGSQIIASGSVSVLGQPAGSAELRHRVGYMPQDPTIYNDLRVIDNIRYFAELCGVDR 120
RCIVGSQIIASGSVSVLGQPAGSAELRHRVGYMPQDPTIYN+LRVIDNIRYFAELCGVDR
Sbjct 61 RCIVGSQIIASGSVSVLGQPAGSAELRHRVGYMPQDPTIYNNLRVIDNIRYFAELCGVDR 120
Query 121 QAADEVIEAVDLRDHRTARCANLSGGQRARVSLACALVGRPDLLVLDEPTIGLDPVLRVE 180
QAADEVIEAVDLRDHRTARCANLSGGQRARVSLACALVGRPDLLVLDEPTIGLDPVLRVE
Sbjct 121 QAADEVIEAVDLRDHRTARCANLSGGQRARVSLACALVGRPDLLVLDEPTIGLDPVLRVE 180
Query 181 LWDRFTALARRGTTLLVSSHVMDEADRCGDLLLLRQGQLLAHTTPHRLRKETGCTSLEEA 240
LWDRFTALARRGTTLLVSSHVMDEADRCGDLLLLRQGQLLAHTTPHRLRKETGCTSLEEA
Sbjct 181 LWDRFTALARRGTTLLVSSHVMDEADRCGDLLLLRQGQLLAHTTPHRLRKETGCTSLEEA 240
Query 241 FLSIVRRTTTVPAAG 255
FLSIVRRTTTVPAAG
Sbjct 241 FLSIVRRTTTVPAAG 255
>gi|289447301|ref|ZP_06437045.1| ABC transporter ATP-binding protein [Mycobacterium tuberculosis
CPHL_A]
gi|289420259|gb|EFD17460.1| ABC transporter ATP-binding protein [Mycobacterium tuberculosis
CPHL_A]
Length=255
Score = 503 bits (1296), Expect = 7e-141, Method: Compositional matrix adjust.
Identities = 254/255 (99%), Positives = 255/255 (100%), Gaps = 0/255 (0%)
Query 1 MMISSSDELLRDGADPAVIIDQLRVIRGKRLALQDVSVRVACGTITGLLGPSGSGKTTLI 60
MMISSSDELLRDGADPAVIIDQLRVIRGKRLALQDVSVRVACGTITGLLGPSGSGKTTLI
Sbjct 1 MMISSSDELLRDGADPAVIIDQLRVIRGKRLALQDVSVRVACGTITGLLGPSGSGKTTLI 60
Query 61 RCIVGSQIIASGSVSVLGQPAGSAELRHRVGYMPQDPTIYNDLRVIDNIRYFAELCGVDR 120
RCIVGSQIIASGSVSVLGQPAGSAELRHRVGYMPQDPTIYNDLRVIDNIRYFAELCGVDR
Sbjct 61 RCIVGSQIIASGSVSVLGQPAGSAELRHRVGYMPQDPTIYNDLRVIDNIRYFAELCGVDR 120
Query 121 QAADEVIEAVDLRDHRTARCANLSGGQRARVSLACALVGRPDLLVLDEPTIGLDPVLRVE 180
QAADEVIEAVDLRDHRTARCANLSGGQRARVSLACALVGRPDLLVLDEPTIGLDPVLRVE
Sbjct 121 QAADEVIEAVDLRDHRTARCANLSGGQRARVSLACALVGRPDLLVLDEPTIGLDPVLRVE 180
Query 181 LWDRFTALARRGTTLLVSSHVMDEADRCGDLLLLRQGQLLAHTTPHRLRKETGCTSLEEA 240
LWDRFTALARRGTTLLVSSHVMDEADRCGDLLLLRQG+LLAHTTPHRLRKETGCTSLEEA
Sbjct 181 LWDRFTALARRGTTLLVSSHVMDEADRCGDLLLLRQGRLLAHTTPHRLRKETGCTSLEEA 240
Query 241 FLSIVRRTTTVPAAG 255
FLSIVRRTTTVPAAG
Sbjct 241 FLSIVRRTTTVPAAG 255
>gi|289554540|ref|ZP_06443750.1| ABC transporter ATP-binding protein [Mycobacterium tuberculosis
KZN 605]
gi|289439172|gb|EFD21665.1| ABC transporter ATP-binding protein [Mycobacterium tuberculosis
KZN 605]
Length=254
Score = 503 bits (1295), Expect = 1e-140, Method: Compositional matrix adjust.
Identities = 254/254 (100%), Positives = 254/254 (100%), Gaps = 0/254 (0%)
Query 2 MISSSDELLRDGADPAVIIDQLRVIRGKRLALQDVSVRVACGTITGLLGPSGSGKTTLIR 61
MISSSDELLRDGADPAVIIDQLRVIRGKRLALQDVSVRVACGTITGLLGPSGSGKTTLIR
Sbjct 1 MISSSDELLRDGADPAVIIDQLRVIRGKRLALQDVSVRVACGTITGLLGPSGSGKTTLIR 60
Query 62 CIVGSQIIASGSVSVLGQPAGSAELRHRVGYMPQDPTIYNDLRVIDNIRYFAELCGVDRQ 121
CIVGSQIIASGSVSVLGQPAGSAELRHRVGYMPQDPTIYNDLRVIDNIRYFAELCGVDRQ
Sbjct 61 CIVGSQIIASGSVSVLGQPAGSAELRHRVGYMPQDPTIYNDLRVIDNIRYFAELCGVDRQ 120
Query 122 AADEVIEAVDLRDHRTARCANLSGGQRARVSLACALVGRPDLLVLDEPTIGLDPVLRVEL 181
AADEVIEAVDLRDHRTARCANLSGGQRARVSLACALVGRPDLLVLDEPTIGLDPVLRVEL
Sbjct 121 AADEVIEAVDLRDHRTARCANLSGGQRARVSLACALVGRPDLLVLDEPTIGLDPVLRVEL 180
Query 182 WDRFTALARRGTTLLVSSHVMDEADRCGDLLLLRQGQLLAHTTPHRLRKETGCTSLEEAF 241
WDRFTALARRGTTLLVSSHVMDEADRCGDLLLLRQGQLLAHTTPHRLRKETGCTSLEEAF
Sbjct 181 WDRFTALARRGTTLLVSSHVMDEADRCGDLLLLRQGQLLAHTTPHRLRKETGCTSLEEAF 240
Query 242 LSIVRRTTTVPAAG 255
LSIVRRTTTVPAAG
Sbjct 241 LSIVRRTTTVPAAG 254
>gi|289443144|ref|ZP_06432888.1| ABC transporter ATP-binding protein [Mycobacterium tuberculosis
T46]
gi|289416063|gb|EFD13303.1| ABC transporter ATP-binding protein [Mycobacterium tuberculosis
T46]
Length=247
Score = 489 bits (1259), Expect = 1e-136, Method: Compositional matrix adjust.
Identities = 247/247 (100%), Positives = 247/247 (100%), Gaps = 0/247 (0%)
Query 9 LLRDGADPAVIIDQLRVIRGKRLALQDVSVRVACGTITGLLGPSGSGKTTLIRCIVGSQI 68
LLRDGADPAVIIDQLRVIRGKRLALQDVSVRVACGTITGLLGPSGSGKTTLIRCIVGSQI
Sbjct 1 LLRDGADPAVIIDQLRVIRGKRLALQDVSVRVACGTITGLLGPSGSGKTTLIRCIVGSQI 60
Query 69 IASGSVSVLGQPAGSAELRHRVGYMPQDPTIYNDLRVIDNIRYFAELCGVDRQAADEVIE 128
IASGSVSVLGQPAGSAELRHRVGYMPQDPTIYNDLRVIDNIRYFAELCGVDRQAADEVIE
Sbjct 61 IASGSVSVLGQPAGSAELRHRVGYMPQDPTIYNDLRVIDNIRYFAELCGVDRQAADEVIE 120
Query 129 AVDLRDHRTARCANLSGGQRARVSLACALVGRPDLLVLDEPTIGLDPVLRVELWDRFTAL 188
AVDLRDHRTARCANLSGGQRARVSLACALVGRPDLLVLDEPTIGLDPVLRVELWDRFTAL
Sbjct 121 AVDLRDHRTARCANLSGGQRARVSLACALVGRPDLLVLDEPTIGLDPVLRVELWDRFTAL 180
Query 189 ARRGTTLLVSSHVMDEADRCGDLLLLRQGQLLAHTTPHRLRKETGCTSLEEAFLSIVRRT 248
ARRGTTLLVSSHVMDEADRCGDLLLLRQGQLLAHTTPHRLRKETGCTSLEEAFLSIVRRT
Sbjct 181 ARRGTTLLVSSHVMDEADRCGDLLLLRQGQLLAHTTPHRLRKETGCTSLEEAFLSIVRRT 240
Query 249 TTVPAAG 255
TTVPAAG
Sbjct 241 TTVPAAG 247
>gi|240170134|ref|ZP_04748793.1| putative ATP-binding protein ABC transporter [Mycobacterium kansasii
ATCC 12478]
Length=255
Score = 447 bits (1151), Expect = 5e-124, Method: Compositional matrix adjust.
Identities = 221/255 (87%), Positives = 239/255 (94%), Gaps = 0/255 (0%)
Query 1 MMISSSDELLRDGADPAVIIDQLRVIRGKRLALQDVSVRVACGTITGLLGPSGSGKTTLI 60
MM SSSDELLR GA+PAV+I+ L VIRGK A+QD+S+RV CGTITGLLGPSGSGKTTL+
Sbjct 1 MMSSSSDELLRGGAEPAVLIESLTVIRGKHPAVQDISLRVGCGTITGLLGPSGSGKTTLM 60
Query 61 RCIVGSQIIASGSVSVLGQPAGSAELRHRVGYMPQDPTIYNDLRVIDNIRYFAELCGVDR 120
RCIVGSQII SGSV VLG PAGS++LRHRVGYMPQDPT+YNDLRVIDNIRYFAELCGVD
Sbjct 61 RCIVGSQIITSGSVRVLGLPAGSSQLRHRVGYMPQDPTVYNDLRVIDNIRYFAELCGVDG 120
Query 121 QAADEVIEAVDLRDHRTARCANLSGGQRARVSLACALVGRPDLLVLDEPTIGLDPVLRVE 180
QAADEVI+AVDL HRTARCANLSGGQRARVSLACALVGRPDLLVLDEPTIGLDPVLRVE
Sbjct 121 QAADEVIDAVDLSSHRTARCANLSGGQRARVSLACALVGRPDLLVLDEPTIGLDPVLRVE 180
Query 181 LWDRFTALARRGTTLLVSSHVMDEADRCGDLLLLRQGQLLAHTTPHRLRKETGCTSLEEA 240
LWD+FT LARRGTTL+VSSHVMDEADRCGDLLL+R+G+LLAHTTP RLRKETGCTSLE+A
Sbjct 181 LWDQFTTLARRGTTLVVSSHVMDEADRCGDLLLMREGRLLAHTTPDRLRKETGCTSLEDA 240
Query 241 FLSIVRRTTTVPAAG 255
FLSI+RRTTT PAAG
Sbjct 241 FLSIIRRTTTAPAAG 255
>gi|289750243|ref|ZP_06509621.1| ABC transporter ATP-binding protein [Mycobacterium tuberculosis
T92]
gi|289690830|gb|EFD58259.1| ABC transporter ATP-binding protein [Mycobacterium tuberculosis
T92]
Length=214
Score = 402 bits (1032), Expect = 4e-110, Method: Compositional matrix adjust.
Identities = 202/202 (100%), Positives = 202/202 (100%), Gaps = 0/202 (0%)
Query 1 MMISSSDELLRDGADPAVIIDQLRVIRGKRLALQDVSVRVACGTITGLLGPSGSGKTTLI 60
MMISSSDELLRDGADPAVIIDQLRVIRGKRLALQDVSVRVACGTITGLLGPSGSGKTTLI
Sbjct 1 MMISSSDELLRDGADPAVIIDQLRVIRGKRLALQDVSVRVACGTITGLLGPSGSGKTTLI 60
Query 61 RCIVGSQIIASGSVSVLGQPAGSAELRHRVGYMPQDPTIYNDLRVIDNIRYFAELCGVDR 120
RCIVGSQIIASGSVSVLGQPAGSAELRHRVGYMPQDPTIYNDLRVIDNIRYFAELCGVDR
Sbjct 61 RCIVGSQIIASGSVSVLGQPAGSAELRHRVGYMPQDPTIYNDLRVIDNIRYFAELCGVDR 120
Query 121 QAADEVIEAVDLRDHRTARCANLSGGQRARVSLACALVGRPDLLVLDEPTIGLDPVLRVE 180
QAADEVIEAVDLRDHRTARCANLSGGQRARVSLACALVGRPDLLVLDEPTIGLDPVLRVE
Sbjct 121 QAADEVIEAVDLRDHRTARCANLSGGQRARVSLACALVGRPDLLVLDEPTIGLDPVLRVE 180
Query 181 LWDRFTALARRGTTLLVSSHVM 202
LWDRFTALARRGTTLLVSSHVM
Sbjct 181 LWDRFTALARRGTTLLVSSHVM 202
>gi|289569735|ref|ZP_06449962.1| ABC transporter ATP-binding protein [Mycobacterium tuberculosis
T17]
gi|289543489|gb|EFD47137.1| ABC transporter ATP-binding protein [Mycobacterium tuberculosis
T17]
Length=198
Score = 388 bits (996), Expect = 4e-106, Method: Compositional matrix adjust.
Identities = 196/196 (100%), Positives = 196/196 (100%), Gaps = 0/196 (0%)
Query 1 MMISSSDELLRDGADPAVIIDQLRVIRGKRLALQDVSVRVACGTITGLLGPSGSGKTTLI 60
MMISSSDELLRDGADPAVIIDQLRVIRGKRLALQDVSVRVACGTITGLLGPSGSGKTTLI
Sbjct 1 MMISSSDELLRDGADPAVIIDQLRVIRGKRLALQDVSVRVACGTITGLLGPSGSGKTTLI 60
Query 61 RCIVGSQIIASGSVSVLGQPAGSAELRHRVGYMPQDPTIYNDLRVIDNIRYFAELCGVDR 120
RCIVGSQIIASGSVSVLGQPAGSAELRHRVGYMPQDPTIYNDLRVIDNIRYFAELCGVDR
Sbjct 61 RCIVGSQIIASGSVSVLGQPAGSAELRHRVGYMPQDPTIYNDLRVIDNIRYFAELCGVDR 120
Query 121 QAADEVIEAVDLRDHRTARCANLSGGQRARVSLACALVGRPDLLVLDEPTIGLDPVLRVE 180
QAADEVIEAVDLRDHRTARCANLSGGQRARVSLACALVGRPDLLVLDEPTIGLDPVLRVE
Sbjct 121 QAADEVIEAVDLRDHRTARCANLSGGQRARVSLACALVGRPDLLVLDEPTIGLDPVLRVE 180
Query 181 LWDRFTALARRGTTLL 196
LWDRFTALARRGTTLL
Sbjct 181 LWDRFTALARRGTTLL 196
>gi|118462742|ref|YP_882269.1| ABC transporter ATP-binding protein [Mycobacterium avium 104]
gi|118164029|gb|ABK64926.1| ABC transporter ATP-binding subunit [Mycobacterium avium 104]
Length=253
Score = 383 bits (983), Expect = 2e-104, Method: Compositional matrix adjust.
Identities = 189/249 (76%), Positives = 218/249 (88%), Gaps = 1/249 (0%)
Query 1 MMISSSDELLRDGADPAVIIDQLRVIRGKRLALQDVSVRVACGTITGLLGPSGSGKTTLI 60
MM SS DEL+ GA+PAV I+ LRV+RGKR AL D SV++A G+ITGLLGPSG GKTTLI
Sbjct 1 MMSSSGDELI-GGAEPAVRIEHLRVVRGKRPALHDFSVQIAKGSITGLLGPSGCGKTTLI 59
Query 61 RCIVGSQIIASGSVSVLGQPAGSAELRHRVGYMPQDPTIYNDLRVIDNIRYFAELCGVDR 120
RCIVG+QI+ GSV+VLG+PAGSAELRHRVGY+PQDPTIYNDLRV+DN+RYFA L G D
Sbjct 60 RCIVGTQILTKGSVTVLGKPAGSAELRHRVGYLPQDPTIYNDLRVVDNVRYFAALYGFDG 119
Query 121 QAADEVIEAVDLRDHRTARCANLSGGQRARVSLACALVGRPDLLVLDEPTIGLDPVLRVE 180
QAAD I+ V L DHR A C NLSGGQR RVSLACALV RPDLLVLDEPT+GLDPVLR +
Sbjct 120 QAADAAIDRVGLTDHRIALCGNLSGGQRTRVSLACALVRRPDLLVLDEPTVGLDPVLRAD 179
Query 181 LWDRFTALARRGTTLLVSSHVMDEADRCGDLLLLRQGQLLAHTTPHRLRKETGCTSLEEA 240
LWD+F ALAR GTTLLVSSHVMDEAD CGDLLL+R+G+L+AHTTP+RLR++TGCTSLE+A
Sbjct 180 LWDQFAALARGGTTLLVSSHVMDEADHCGDLLLMREGRLVAHTTPNRLREDTGCTSLEDA 239
Query 241 FLSIVRRTT 249
FLSI++R+T
Sbjct 240 FLSIIKRST 248
>gi|41407491|ref|NP_960327.1| hypothetical protein MAP1393c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41395844|gb|AAS03710.1| hypothetical protein MAP_1393c [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=253
Score = 380 bits (976), Expect = 1e-103, Method: Compositional matrix adjust.
Identities = 188/249 (76%), Positives = 217/249 (88%), Gaps = 1/249 (0%)
Query 1 MMISSSDELLRDGADPAVIIDQLRVIRGKRLALQDVSVRVACGTITGLLGPSGSGKTTLI 60
MM SS DEL+ GA+PAV I+ LRV+RGKR AL D SV++A G+ITGLLGPSG GKTTLI
Sbjct 1 MMSSSGDELI-GGAEPAVRIEHLRVVRGKRPALHDFSVQIAKGSITGLLGPSGCGKTTLI 59
Query 61 RCIVGSQIIASGSVSVLGQPAGSAELRHRVGYMPQDPTIYNDLRVIDNIRYFAELCGVDR 120
RCIVG+QI+ G V+VLG+PAGSAELRHRVGY+PQDPTIYNDLRV+DN+RYFA L G D
Sbjct 60 RCIVGTQILTKGRVTVLGKPAGSAELRHRVGYLPQDPTIYNDLRVVDNVRYFAALYGFDG 119
Query 121 QAADEVIEAVDLRDHRTARCANLSGGQRARVSLACALVGRPDLLVLDEPTIGLDPVLRVE 180
QAAD I+ V L DHR A C NLSGGQR RVSLACALV RPDLLVLDEPT+GLDPVLR +
Sbjct 120 QAADAAIDRVGLTDHRIALCGNLSGGQRTRVSLACALVCRPDLLVLDEPTVGLDPVLRAD 179
Query 181 LWDRFTALARRGTTLLVSSHVMDEADRCGDLLLLRQGQLLAHTTPHRLRKETGCTSLEEA 240
LWD+F ALAR GTTLLVSSHVMDEAD CGDLLL+R+G+L+AHTTP+RLR++TGCTSLE+A
Sbjct 180 LWDQFAALARGGTTLLVSSHVMDEADHCGDLLLMREGRLVAHTTPNRLREDTGCTSLEDA 239
Query 241 FLSIVRRTT 249
FLSI++R+T
Sbjct 240 FLSIIKRST 248
>gi|254819733|ref|ZP_05224734.1| hypothetical protein MintA_07409 [Mycobacterium intracellulare
ATCC 13950]
Length=253
Score = 377 bits (969), Expect = 7e-103, Method: Compositional matrix adjust.
Identities = 186/248 (75%), Positives = 214/248 (87%), Gaps = 0/248 (0%)
Query 2 MISSSDELLRDGADPAVIIDQLRVIRGKRLALQDVSVRVACGTITGLLGPSGSGKTTLIR 61
M SS DEL+ D A+PAV ID LRVIRGKR AL D SV++A G+ITGLLGPSG GKTTLIR
Sbjct 1 MSSSRDELISDRAEPAVEIDHLRVIRGKRPALHDFSVQIAAGSITGLLGPSGCGKTTLIR 60
Query 62 CIVGSQIIASGSVSVLGQPAGSAELRHRVGYMPQDPTIYNDLRVIDNIRYFAELCGVDRQ 121
CIVG+QI+ SG V VLG+PAGSAELR RVGY+PQDPTIYNDLR++DN+RYFA L G D +
Sbjct 61 CIVGTQIVTSGRVVVLGKPAGSAELRRRVGYLPQDPTIYNDLRIVDNVRYFATLYGFDGR 120
Query 122 AADEVIEAVDLRDHRTARCANLSGGQRARVSLACALVGRPDLLVLDEPTIGLDPVLRVEL 181
AAD IE V L DHRTA C NLSGGQR RVSLACALV +PDLLVLDEPT+GLDPVLR +L
Sbjct 121 AADAAIERVGLSDHRTALCGNLSGGQRTRVSLACALVCQPDLLVLDEPTVGLDPVLRADL 180
Query 182 WDRFTALARRGTTLLVSSHVMDEADRCGDLLLLRQGQLLAHTTPHRLRKETGCTSLEEAF 241
WD+F LAR GTTLLVSSHVMDEAD CGDLLL+R+G+L+AHTTP +LR++TGCTSLE+AF
Sbjct 181 WDQFAELARAGTTLLVSSHVMDEADHCGDLLLMREGRLVAHTTPSQLREDTGCTSLEDAF 240
Query 242 LSIVRRTT 249
LSI++R+T
Sbjct 241 LSIIKRST 248
>gi|296164584|ref|ZP_06847152.1| antibiotic resistance ABC superfamily ATP binding cassette transporter,
ABC protein [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295900064|gb|EFG79502.1| antibiotic resistance ABC superfamily ATP binding cassette transporter,
ABC protein [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length=251
Score = 367 bits (943), Expect = 7e-100, Method: Compositional matrix adjust.
Identities = 184/250 (74%), Positives = 210/250 (84%), Gaps = 3/250 (1%)
Query 1 MMISSSDELLRDGADPAVIIDQLRVIRGKRLALQDVSVRVACGTITGLLGPSGSGKTTLI 60
MM SS DEL+ A PAV ID LRVIRGKR AL D+SV++ G+ITGLLGPSG GKTTL+
Sbjct 1 MMTSSCDELI---AAPAVRIDHLRVIRGKRPALHDLSVQIGRGSITGLLGPSGCGKTTLM 57
Query 61 RCIVGSQIIASGSVSVLGQPAGSAELRHRVGYMPQDPTIYNDLRVIDNIRYFAELCGVDR 120
RCIVG+QI+ +G+V+VLG PAGS L RVGY+PQDPTIYNDLRV+DN+RYFA L G R
Sbjct 58 RCIVGTQIVTAGTVTVLGHPAGSTALHRRVGYLPQDPTIYNDLRVVDNVRYFASLYGFGR 117
Query 121 QAADEVIEAVDLRDHRTARCANLSGGQRARVSLACALVGRPDLLVLDEPTIGLDPVLRVE 180
QAAD+ I+ V L DHRTA C NLSGGQR RVSLACALV RPDLLVLDEPT+GLDPVLR +
Sbjct 118 QAADDAIDRVGLADHRTAFCGNLSGGQRTRVSLACALVCRPDLLVLDEPTVGLDPVLRAD 177
Query 181 LWDRFTALARRGTTLLVSSHVMDEADRCGDLLLLRQGQLLAHTTPHRLRKETGCTSLEEA 240
LW++FT LAR GTTLLVSSHVMDEAD C DLLL+R G LLAHTTP RLR++TGCTSLE+A
Sbjct 178 LWEQFTDLARGGTTLLVSSHVMDEADHCADLLLMRDGHLLAHTTPTRLREDTGCTSLEDA 237
Query 241 FLSIVRRTTT 250
FLSI++R TT
Sbjct 238 FLSIIKRNTT 247
>gi|336457845|gb|EGO36839.1| ABC-type multidrug transport system, ATPase component [Mycobacterium
avium subsp. paratuberculosis S397]
Length=237
Score = 362 bits (930), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 176/230 (77%), Positives = 203/230 (89%), Gaps = 0/230 (0%)
Query 20 IDQLRVIRGKRLALQDVSVRVACGTITGLLGPSGSGKTTLIRCIVGSQIIASGSVSVLGQ 79
I+ LRV+RGKR AL D SV++A G+ITGLLGPSG GKTTLIRCIVG+QI+ G V+VLG+
Sbjct 3 IEHLRVVRGKRPALHDFSVQIAKGSITGLLGPSGCGKTTLIRCIVGTQILTKGRVTVLGK 62
Query 80 PAGSAELRHRVGYMPQDPTIYNDLRVIDNIRYFAELCGVDRQAADEVIEAVDLRDHRTAR 139
PAGSAELRHRVGY+PQDPTIYNDLRV+DN+RYFA L G D QAAD I+ V L DHR A
Sbjct 63 PAGSAELRHRVGYLPQDPTIYNDLRVVDNVRYFAALYGFDGQAADAAIDRVGLTDHRIAL 122
Query 140 CANLSGGQRARVSLACALVGRPDLLVLDEPTIGLDPVLRVELWDRFTALARRGTTLLVSS 199
C NLSGGQR RVSLACALV RPDLLVLDEPT+GLDPVLR +LWD+F ALAR GTTLLVSS
Sbjct 123 CGNLSGGQRTRVSLACALVCRPDLLVLDEPTVGLDPVLRADLWDQFAALARGGTTLLVSS 182
Query 200 HVMDEADRCGDLLLLRQGQLLAHTTPHRLRKETGCTSLEEAFLSIVRRTT 249
HVMDEAD CGDLLL+R+G+L+AHTTP+RLR++TGCTSLE+AFLSI++R+T
Sbjct 183 HVMDEADHCGDLLLMREGRLVAHTTPNRLREDTGCTSLEDAFLSIIKRST 232
>gi|342860736|ref|ZP_08717386.1| hypothetical protein MCOL_17733 [Mycobacterium colombiense CECT
3035]
gi|342131760|gb|EGT85017.1| hypothetical protein MCOL_17733 [Mycobacterium colombiense CECT
3035]
Length=237
Score = 359 bits (922), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 174/230 (76%), Positives = 203/230 (89%), Gaps = 0/230 (0%)
Query 20 IDQLRVIRGKRLALQDVSVRVACGTITGLLGPSGSGKTTLIRCIVGSQIIASGSVSVLGQ 79
ID LRV+RGKR AL D SVR+A G+ITGLLGPSG GKTTLIRCIVG+QII++G+V+VLG+
Sbjct 3 IDHLRVVRGKRPALHDFSVRIAAGSITGLLGPSGCGKTTLIRCIVGTQIISTGTVTVLGK 62
Query 80 PAGSAELRHRVGYMPQDPTIYNDLRVIDNIRYFAELCGVDRQAADEVIEAVDLRDHRTAR 139
AGSAELRHR+GY+PQDPTIYNDLRV+DN+RYFA L G D +AAD I+ V L DHRTA
Sbjct 63 QAGSAELRHRIGYLPQDPTIYNDLRVVDNVRYFAALYGFDGRAADVAIDRVGLTDHRTAL 122
Query 140 CANLSGGQRARVSLACALVGRPDLLVLDEPTIGLDPVLRVELWDRFTALARRGTTLLVSS 199
C NLSGGQR RVSLACALV +PDLLVLDEPT+GLDPVLR +LW++F LAR GTTLLVSS
Sbjct 123 CGNLSGGQRTRVSLACALVCQPDLLVLDEPTVGLDPVLRADLWEQFAELARAGTTLLVSS 182
Query 200 HVMDEADRCGDLLLLRQGQLLAHTTPHRLRKETGCTSLEEAFLSIVRRTT 249
HVMDEAD CGDLLL+R G+L+AHTTP RLR++TGCTSLE+AFLSI++R+T
Sbjct 183 HVMDEADHCGDLLLMRDGRLVAHTTPSRLREDTGCTSLEDAFLSIIKRST 232
>gi|254775537|ref|ZP_05217053.1| hypothetical protein MaviaA2_12833 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=237
Score = 357 bits (917), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 174/230 (76%), Positives = 203/230 (89%), Gaps = 0/230 (0%)
Query 20 IDQLRVIRGKRLALQDVSVRVACGTITGLLGPSGSGKTTLIRCIVGSQIIASGSVSVLGQ 79
I+ LRV+RGKR AL D SV++A G+ITGLLGPSG GKTTLIRCIVG+QI+ GSV+VLG+
Sbjct 3 IEHLRVVRGKRPALHDFSVQIAKGSITGLLGPSGCGKTTLIRCIVGTQILTKGSVTVLGK 62
Query 80 PAGSAELRHRVGYMPQDPTIYNDLRVIDNIRYFAELCGVDRQAADEVIEAVDLRDHRTAR 139
AGSAELRHRVGY+PQDPTIYNDLRV+DN+RYFA L G D QAAD I+ V L DHR A
Sbjct 63 RAGSAELRHRVGYLPQDPTIYNDLRVVDNVRYFAALYGFDGQAADAAIDRVGLTDHRIAL 122
Query 140 CANLSGGQRARVSLACALVGRPDLLVLDEPTIGLDPVLRVELWDRFTALARRGTTLLVSS 199
C+NLSGGQR RVSLACALV RPDLLVLDEPT+GLDPVLR +LWD+F ALAR GTTL VSS
Sbjct 123 CSNLSGGQRTRVSLACALVCRPDLLVLDEPTVGLDPVLRADLWDQFAALARGGTTLPVSS 182
Query 200 HVMDEADRCGDLLLLRQGQLLAHTTPHRLRKETGCTSLEEAFLSIVRRTT 249
HVMDEAD CG+LLL+R+G+L+AHTTP+RLR++TGCTSLE+AFLSI++R+T
Sbjct 183 HVMDEADHCGNLLLMREGRLVAHTTPNRLREDTGCTSLEDAFLSIIKRST 232
>gi|108799923|ref|YP_640120.1| ABC transporter-like protein [Mycobacterium sp. MCS]
gi|119869033|ref|YP_938985.1| ABC transporter-like protein [Mycobacterium sp. KMS]
gi|108770342|gb|ABG09064.1| ABC transporter related protein [Mycobacterium sp. MCS]
gi|119695122|gb|ABL92195.1| ABC transporter related protein [Mycobacterium sp. KMS]
Length=253
Score = 355 bits (911), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 182/254 (72%), Positives = 211/254 (84%), Gaps = 3/254 (1%)
Query 1 MMISSSDELLRDGADPAVIIDQLRVIRGKRLALQDVSVRVACGTITGLLGPSGSGKTTLI 60
MM SS DEL+ D A AV I LRV+RG R+AL VSV+VA G ITG+LGPSG GKTTL+
Sbjct 1 MMTSSDDELI-DAA--AVDIRDLRVVRGNRVALDRVSVQVARGAITGILGPSGCGKTTLM 57
Query 61 RCIVGSQIIASGSVSVLGQPAGSAELRHRVGYMPQDPTIYNDLRVIDNIRYFAELCGVDR 120
R +VG+QIIA+GSV+VLG+PAGSAELRHRVGY+ QD TIYNDLRVIDN+RYFA L G
Sbjct 58 RSVVGTQIIAAGSVTVLGRPAGSAELRHRVGYVTQDATIYNDLRVIDNVRYFAALYGTGG 117
Query 121 QAADEVIEAVDLRDHRTARCANLSGGQRARVSLACALVGRPDLLVLDEPTIGLDPVLRVE 180
QAADE ++AV L DHR+ ANLSGGQR R SLACALV P+LLVLDEPT+GLDPVLRV+
Sbjct 118 QAADEAVDAVGLADHRSEFGANLSGGQRTRASLACALVAHPELLVLDEPTVGLDPVLRVD 177
Query 181 LWDRFTALARRGTTLLVSSHVMDEADRCGDLLLLRQGQLLAHTTPHRLRKETGCTSLEEA 240
LW +F LAR GTTLLVSSHVMDEAD CGDL+LLR+G+LLAH+TP +LRK+TGCTSLEEA
Sbjct 178 LWHQFDELARGGTTLLVSSHVMDEADHCGDLILLREGRLLAHSTPEQLRKDTGCTSLEEA 237
Query 241 FLSIVRRTTTVPAA 254
FLS++RR+T A
Sbjct 238 FLSVIRRSTAAGVA 251
>gi|126435551|ref|YP_001071242.1| ABC transporter-like protein [Mycobacterium sp. JLS]
gi|126235351|gb|ABN98751.1| ABC transporter related protein [Mycobacterium sp. JLS]
Length=253
Score = 353 bits (907), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 181/254 (72%), Positives = 210/254 (83%), Gaps = 3/254 (1%)
Query 1 MMISSSDELLRDGADPAVIIDQLRVIRGKRLALQDVSVRVACGTITGLLGPSGSGKTTLI 60
MM SS DEL+ D A AV I LRV+RG R+AL VSV+VA G ITG+LGPSG GKTTL+
Sbjct 1 MMTSSDDELI-DAA--AVDIRDLRVVRGNRVALDRVSVQVARGAITGILGPSGCGKTTLM 57
Query 61 RCIVGSQIIASGSVSVLGQPAGSAELRHRVGYMPQDPTIYNDLRVIDNIRYFAELCGVDR 120
R +VG+QIIA+GSV+VLG+PAGSAELRHRVGY+ QD TIYNDLRVIDN+RYFA L G
Sbjct 58 RSVVGTQIIAAGSVTVLGRPAGSAELRHRVGYVTQDATIYNDLRVIDNVRYFAALYGTGG 117
Query 121 QAADEVIEAVDLRDHRTARCANLSGGQRARVSLACALVGRPDLLVLDEPTIGLDPVLRVE 180
QAADE ++AV L DHR+ ANLSGGQR R SLAC LV P+LLVLDEPT+GLDPVLRV+
Sbjct 118 QAADEAVDAVGLADHRSEFGANLSGGQRTRASLACVLVAHPELLVLDEPTVGLDPVLRVD 177
Query 181 LWDRFTALARRGTTLLVSSHVMDEADRCGDLLLLRQGQLLAHTTPHRLRKETGCTSLEEA 240
LW +F LAR GTTLLVSSHVMDEAD CGDL+LLR+G+LLAH+TP +LRK+TGCTSLEEA
Sbjct 178 LWQQFDELARGGTTLLVSSHVMDEADHCGDLILLREGRLLAHSTPEQLRKDTGCTSLEEA 237
Query 241 FLSIVRRTTTVPAA 254
FLS++RR+T A
Sbjct 238 FLSVIRRSTAAGVA 251
>gi|333990485|ref|YP_004523099.1| antibiotic resistance ABC transporter efflux system ATP-binding
protein [Mycobacterium sp. JDM601]
gi|333486453|gb|AEF35845.1| antibiotic resistance ABC transporter efflux system ATP-binding
protein [Mycobacterium sp. JDM601]
Length=254
Score = 351 bits (901), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 192/255 (76%), Positives = 214/255 (84%), Gaps = 1/255 (0%)
Query 1 MMISSSDELLRDGADPAVIIDQLRVIRGKRLALQDVSVRVACGTITGLLGPSGSGKTTLI 60
MMISS DEL PAV I+ LRVIRGKR L D+SVR+A GTITGLLGPSG GKTTL+
Sbjct 1 MMISSRDELSGARPIPAVDIEHLRVIRGKRPVLHDLSVRIAPGTITGLLGPSGCGKTTLM 60
Query 61 RCIVGSQIIASGSVSVLGQPAGSAELRHRVGYMPQDPTIYNDLRVIDNIRYFAELCGVDR 120
RCIVG+Q+I G V+VLG AGSA LR RVGYMPQ TIY+DLRVIDN+RYFA L GVD
Sbjct 61 RCIVGTQVITGGQVTVLGDAAGSAALRRRVGYMPQQATIYDDLRVIDNVRYFASLAGVDA 120
Query 121 QAADEVIEAVDLRDHRTARCANLSGGQRARVSLACALVGRPDLLVLDEPTIGLDPVLRVE 180
AAD+ +++VDL+ HR CANLSGGQRARVSLACALVGRPDLLVLDEPTIGLDPVLR E
Sbjct 121 SAADDAVDSVDLQRHRGDYCANLSGGQRARVSLACALVGRPDLLVLDEPTIGLDPVLRAE 180
Query 181 LWDRFTALARRGTTLLVSSHVMDEADRCGDLLLLRQGQLLAHTTPHRLRKETGCTSLEEA 240
LW +F ALARRGTTLLVSSHVMDEAD CGDLLL+RQG+LLA TTP RLR+ETGCTS+EEA
Sbjct 181 LWHQFQALARRGTTLLVSSHVMDEADHCGDLLLMRQGRLLARTTPRRLREETGCTSMEEA 240
Query 241 FLSIVRRTTTVPAAG 255
FLS++RR +T P AG
Sbjct 241 FLSVIRR-STAPRAG 254
>gi|120404271|ref|YP_954100.1| ABC transporter--like protein [Mycobacterium vanbaalenii PYR-1]
gi|119957089|gb|ABM14094.1| ABC transporter-related protein [Mycobacterium vanbaalenii PYR-1]
Length=254
Score = 350 bits (899), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 179/249 (72%), Positives = 202/249 (82%), Gaps = 0/249 (0%)
Query 1 MMISSSDELLRDGADPAVIIDQLRVIRGKRLALQDVSVRVACGTITGLLGPSGSGKTTLI 60
MM SS DELL P + I L V+RG R+AL VSV+VA GTITGLLGPSG GKTTL+
Sbjct 1 MMSSSMDELLPPVPAPVIDIRDLAVVRGGRVALDGVSVQVARGTITGLLGPSGCGKTTLM 60
Query 61 RCIVGSQIIASGSVSVLGQPAGSAELRHRVGYMPQDPTIYNDLRVIDNIRYFAELCGVDR 120
RCIVG+QI+A GSV VLG PAGSA+LRHRVGY+ QDPTIY DL V+DN+RYFA L G DR
Sbjct 61 RCIVGTQIVAGGSVLVLGHPAGSAQLRHRVGYVTQDPTIYPDLPVVDNVRYFAALSGTDR 120
Query 121 QAADEVIEAVDLRDHRTARCANLSGGQRARVSLACALVGRPDLLVLDEPTIGLDPVLRVE 180
Q D+ IEAV L +R AR NLSGGQ+ RVSLACALV RPDLLVLDEPT+GLDPVLR +
Sbjct 121 QDVDDAIEAVGLHGYRKARAGNLSGGQKTRVSLACALVARPDLLVLDEPTVGLDPVLRAD 180
Query 181 LWDRFTALARRGTTLLVSSHVMDEADRCGDLLLLRQGQLLAHTTPHRLRKETGCTSLEEA 240
LWDRF LAR GTTLLVSSHVMDEADRC DL+LLR G++LAHTTP RLR++TGC SLE A
Sbjct 181 LWDRFDRLARDGTTLLVSSHVMDEADRCEDLVLLRAGKILAHTTPARLREDTGCQSLEHA 240
Query 241 FLSIVRRTT 249
FL+I+RR T
Sbjct 241 FLAIIRRGT 249
>gi|183982500|ref|YP_001850791.1| antibiotic resistance ABC transporter, efflux system, ATP-binding
protein [Mycobacterium marinum M]
gi|183175826|gb|ACC40936.1| antibiotic resistance ABC transporter, efflux system, ATP-binding
protein [Mycobacterium marinum M]
Length=254
Score = 349 bits (896), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 176/253 (70%), Positives = 203/253 (81%), Gaps = 0/253 (0%)
Query 2 MISSSDELLRDGADPAVIIDQLRVIRGKRLALQDVSVRVACGTITGLLGPSGSGKTTLIR 61
M S+S E L G+ PAV I LRVIRGK AL D SV +A GTITGLLGPSG GKTTL+R
Sbjct 1 MTSTSVESLTGGSQPAVSIKHLRVIRGKHSALHDFSVDIARGTITGLLGPSGCGKTTLMR 60
Query 62 CIVGSQIIASGSVSVLGQPAGSAELRHRVGYMPQDPTIYNDLRVIDNIRYFAELCGVDRQ 121
IVG+QI+ SG+V+VLG PAGSA LR +VGY+PQDP IY+DLR+IDN+RYFA L G +RQ
Sbjct 61 SIVGTQIVTSGTVTVLGHPAGSAVLRRQVGYLPQDPAIYHDLRIIDNVRYFAALYGYNRQ 120
Query 122 AADEVIEAVDLRDHRTARCANLSGGQRARVSLACALVGRPDLLVLDEPTIGLDPVLRVEL 181
AAD+ I V L DHRT CANLSGGQR RVSLACALV P LLVLDEPT+GLDPVLRV+L
Sbjct 121 AADDAIARVGLTDHRTDYCANLSGGQRTRVSLACALVCHPTLLVLDEPTVGLDPVLRVDL 180
Query 182 WDRFTALARRGTTLLVSSHVMDEADRCGDLLLLRQGQLLAHTTPHRLRKETGCTSLEEAF 241
W +F LAR TTLL+SSHVMDEA+ CGDLLL+R G+L+A TTP +LRK+TGC SLEEAF
Sbjct 181 WQQFAELARARTTLLISSHVMDEAEHCGDLLLMRAGRLVAQTTPTQLRKDTGCMSLEEAF 240
Query 242 LSIVRRTTTVPAA 254
LS++RR TT A
Sbjct 241 LSMIRRHTTTHQA 253
>gi|118617298|ref|YP_905630.1| antibiotic resistance ABC transporter, efflux system, ATP-binding
protein [Mycobacterium ulcerans Agy99]
gi|118569408|gb|ABL04159.1| antibiotic resistance ABC transporter, efflux system, ATP-binding
protein [Mycobacterium ulcerans Agy99]
Length=255
Score = 344 bits (883), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 173/254 (69%), Positives = 203/254 (80%), Gaps = 0/254 (0%)
Query 1 MMISSSDELLRDGADPAVIIDQLRVIRGKRLALQDVSVRVACGTITGLLGPSGSGKTTLI 60
M+ S+S E + G+ PAV I LRVIRGK AL D SV +A GTITGLLGPSG GKTTL+
Sbjct 1 MVTSTSVESVTGGSQPAVSIKHLRVIRGKHSALHDFSVDIARGTITGLLGPSGCGKTTLM 60
Query 61 RCIVGSQIIASGSVSVLGQPAGSAELRHRVGYMPQDPTIYNDLRVIDNIRYFAELCGVDR 120
R IVG+QI+ SG+V+VLG PAGSA LR +VGY+PQDP IY+DLR+IDN+RYFA L G +R
Sbjct 61 RSIVGTQIVTSGTVTVLGHPAGSAVLRRQVGYLPQDPAIYHDLRIIDNVRYFAALYGYNR 120
Query 121 QAADEVIEAVDLRDHRTARCANLSGGQRARVSLACALVGRPDLLVLDEPTIGLDPVLRVE 180
QAAD+ I V L DHRT CANLSGGQR RVSLACALV P LLV DEPT+GLDPVLRV+
Sbjct 121 QAADDAIARVGLTDHRTDYCANLSGGQRTRVSLACALVCHPTLLVPDEPTVGLDPVLRVD 180
Query 181 LWDRFTALARRGTTLLVSSHVMDEADRCGDLLLLRQGQLLAHTTPHRLRKETGCTSLEEA 240
LW +F LAR TTLL+SSHVM+EA+ CGDLLL+R G+L+A TTP +LRK+TGC SLEEA
Sbjct 181 LWQQFAELARARTTLLISSHVMNEAEHCGDLLLMRAGRLVAQTTPTQLRKDTGCMSLEEA 240
Query 241 FLSIVRRTTTVPAA 254
FLS++RR TT A
Sbjct 241 FLSMIRRHTTTHQA 254
>gi|118469618|ref|YP_888056.1| ABC transporter ATP-binding protein [Mycobacterium smegmatis
str. MC2 155]
gi|118170905|gb|ABK71801.1| ABC transporter ATP-binding protein [Mycobacterium smegmatis
str. MC2 155]
Length=254
Score = 330 bits (847), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 169/249 (68%), Positives = 207/249 (84%), Gaps = 2/249 (0%)
Query 1 MMISSSDELLRDGAD--PAVIIDQLRVIRGKRLALQDVSVRVACGTITGLLGPSGSGKTT 58
MM SS DEL ++ PA+ ID L V+RG R A++DV+VR+A GTITGLLGPSG GKTT
Sbjct 1 MMTSSRDELSATPSEREPAIEIDGLHVVRGGRPAVRDVTVRIARGTITGLLGPSGCGKTT 60
Query 59 LIRCIVGSQIIASGSVSVLGQPAGSAELRHRVGYMPQDPTIYNDLRVIDNIRYFAELCGV 118
L+RCIVG+QI+A G+V+VLG PAGSA LRHRVGY+ Q+PTIY+DLRVIDN+RYFA L G
Sbjct 61 LMRCIVGTQIVAKGTVTVLGHPAGSAPLRHRVGYVTQNPTIYDDLRVIDNVRYFAALYGT 120
Query 119 DRQAADEVIEAVDLRDHRTARCANLSGGQRARVSLACALVGRPDLLVLDEPTIGLDPVLR 178
AAD+ ++AV L D R+A C NLSGGQR R SLACALV P+LLVLDEPT+GLDPVLR
Sbjct 121 SPAAADQAVDAVGLGDQRSAYCGNLSGGQRTRASLACALVAEPELLVLDEPTVGLDPVLR 180
Query 179 VELWDRFTALARRGTTLLVSSHVMDEADRCGDLLLLRQGQLLAHTTPHRLRKETGCTSLE 238
V+LW +F LA +GTTL+VSSHVMDEAD CGDLLL+R+G+LLAHTTP RLR++T C+SLE
Sbjct 181 VDLWQQFNDLAAKGTTLVVSSHVMDEADHCGDLLLMREGRLLAHTTPARLREDTSCSSLE 240
Query 239 EAFLSIVRR 247
+AFL+++R+
Sbjct 241 QAFLAVIRQ 249
>gi|226360089|ref|YP_002777867.1| ABC transporter ATP-binding protein [Rhodococcus opacus B4]
gi|226238574|dbj|BAH48922.1| putative ABC transporter ATP-binding protein [Rhodococcus opacus
B4]
Length=262
Score = 281 bits (720), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 146/246 (60%), Positives = 179/246 (73%), Gaps = 1/246 (0%)
Query 2 MISSSDELLRDGADPAVI-IDQLRVIRGKRLALQDVSVRVACGTITGLLGPSGSGKTTLI 60
M S SDEL D A I I L V RG+ L + V+VA G+ITGLLGPSG GKTTL+
Sbjct 9 MNSPSDELRSAMTDAAAIDIRDLHVRRGRNEVLHGIDVQVASGSITGLLGPSGCGKTTLM 68
Query 61 RCIVGSQIIASGSVSVLGQPAGSAELRHRVGYMPQDPTIYNDLRVIDNIRYFAELCGVDR 120
RC+VG+QI+ SG+V+VLG PAGS LR RVGY+ Q P++Y DL V N+ YFA L G
Sbjct 69 RCVVGTQIVESGTVTVLGSPAGSVSLRSRVGYVTQSPSVYADLTVRKNVAYFAALYGQPS 128
Query 121 QAADEVIEAVDLRDHRTARCANLSGGQRARVSLACALVGRPDLLVLDEPTIGLDPVLRVE 180
A E ++AV L T + A+LSGGQ RVSLACALV RP++LVLDEPT+GLDP+LRVE
Sbjct 129 SAVTEAVDAVGLTRFATQKAADLSGGQLGRVSLACALVARPEILVLDEPTVGLDPLLRVE 188
Query 181 LWDRFTALARRGTTLLVSSHVMDEADRCGDLLLLRQGQLLAHTTPHRLRKETGCTSLEEA 240
LW+RF LA GTTLLVSSHVMDEA+ C LLL+R G +LA +P LR++TG TSLE+A
Sbjct 189 LWERFEELAAAGTTLLVSSHVMDEAEHCASLLLMRDGYVLAQVSPGGLREQTGETSLEDA 248
Query 241 FLSIVR 246
FL+++R
Sbjct 249 FLNLIR 254
>gi|111017958|ref|YP_700930.1| ABC transporter ATP-binding protein [Rhodococcus jostii RHA1]
gi|110817488|gb|ABG92772.1| ABC transporter, ATP-binding component [Rhodococcus jostii RHA1]
Length=243
Score = 279 bits (713), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 140/231 (61%), Positives = 171/231 (75%), Gaps = 0/231 (0%)
Query 16 PAVIIDQLRVIRGKRLALQDVSVRVACGTITGLLGPSGSGKTTLIRCIVGSQIIASGSVS 75
PA+ I L V RGK L + V+V G+ITGLLGPSG GKTTL+RC+VG+QI+ SG+V+
Sbjct 5 PAIDIRDLHVRRGKNEVLHGIDVQVPSGSITGLLGPSGCGKTTLMRCVVGTQIVESGTVT 64
Query 76 VLGQPAGSAELRHRVGYMPQDPTIYNDLRVIDNIRYFAELCGVDRQAADEVIEAVDLRDH 135
VLG PAGS LR RVGY+ Q P++Y DL V N+ YFA L G A + I+AV L
Sbjct 65 VLGSPAGSVSLRSRVGYVTQSPSVYADLSVKKNVAYFAALYGQPSNAVTDAIDAVGLTRF 124
Query 136 RTARCANLSGGQRARVSLACALVGRPDLLVLDEPTIGLDPVLRVELWDRFTALARRGTTL 195
+ A+LSGGQ RVSLACALV RP++LVLDEPT+GLDP+LRVELW+RF ALA GTTL
Sbjct 125 AAQKAADLSGGQLGRVSLACALVARPEILVLDEPTVGLDPLLRVELWERFDALADAGTTL 184
Query 196 LVSSHVMDEADRCGDLLLLRQGQLLAHTTPHRLRKETGCTSLEEAFLSIVR 246
LVSSHVMDEA+ C LLL+R G LLA +P LR+ TG TSLE+AFL+++R
Sbjct 185 LVSSHVMDEAEHCASLLLMRDGYLLAQVSPGELRERTGETSLEDAFLNLIR 235
>gi|325674260|ref|ZP_08153949.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Rhodococcus equi ATCC 33707]
gi|325554940|gb|EGD24613.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Rhodococcus equi ATCC 33707]
Length=253
Score = 273 bits (698), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 148/245 (61%), Positives = 181/245 (74%), Gaps = 0/245 (0%)
Query 2 MISSSDELLRDGADPAVIIDQLRVIRGKRLALQDVSVRVACGTITGLLGPSGSGKTTLIR 61
M + S+ A AV+I L V RG AL+DV + + G+ITGLLGPSG GKTTL+R
Sbjct 1 MTAPSEHSADPPASSAVVIQGLNVTRGGAPALRDVDLSIPRGSITGLLGPSGCGKTTLMR 60
Query 62 CIVGSQIIASGSVSVLGQPAGSAELRHRVGYMPQDPTIYNDLRVIDNIRYFAELCGVDRQ 121
C+VG+QII SG+V+VLG+PAGS LRHRVGY+ Q+P++Y D+ + DN+RYFA L G
Sbjct 61 CVVGTQIIESGTVTVLGRPAGSTPLRHRVGYVTQEPSVYLDISIRDNVRYFASLYGRGHD 120
Query 122 AADEVIEAVDLRDHRTARCANLSGGQRARVSLACALVGRPDLLVLDEPTIGLDPVLRVEL 181
A ++ IEAV L H +LSGGQ RVSLACALVGRPD+LVLDEPT+GLDPVLR EL
Sbjct 121 AVEDTIEAVGLSTHADHAAGDLSGGQLGRVSLACALVGRPDVLVLDEPTVGLDPVLRAEL 180
Query 182 WDRFTALARRGTTLLVSSHVMDEADRCGDLLLLRQGQLLAHTTPHRLRKETGCTSLEEAF 241
WD F LA G TLLVSSHVMDEAD C LLLLR+G+LLAH +P LR+ TG ++LEEAF
Sbjct 181 WDHFADLAASGATLLVSSHVMDEADHCESLLLLREGRLLAHVSPDELRRRTGKSNLEEAF 240
Query 242 LSIVR 246
L ++R
Sbjct 241 LVLIR 245
>gi|54023957|ref|YP_118199.1| putative ABC transporter ATP-binding protein [Nocardia farcinica
IFM 10152]
gi|54015465|dbj|BAD56835.1| putative ABC transporter ATP-binding protein [Nocardia farcinica
IFM 10152]
Length=243
Score = 273 bits (697), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 140/235 (60%), Positives = 171/235 (73%), Gaps = 0/235 (0%)
Query 11 RDGADPAVIIDQLRVIRGKRLALQDVSVRVACGTITGLLGPSGSGKTTLIRCIVGSQIIA 70
R PAV + L V RG R L VS+ + GTITGLLGPSG GKTTL+R IVG+Q +
Sbjct 3 RPSPTPAVDVRDLVVHRGGRPVLHGVSLTIPSGTITGLLGPSGCGKTTLMRSIVGTQQVR 62
Query 71 SGSVSVLGQPAGSAELRHRVGYMPQDPTIYNDLRVIDNIRYFAELCGVDRQAADEVIEAV 130
SG +S LG PAG+AELR R+GY+ Q P+IYND+ V +N+ YFA L G DR DE + AV
Sbjct 63 SGRISALGLPAGAAELRRRIGYVTQAPSIYNDISVRENVAYFAALYGRDRAEVDEALTAV 122
Query 131 DLRDHRTARCANLSGGQRARVSLACALVGRPDLLVLDEPTIGLDPVLRVELWDRFTALAR 190
LR+H R LSGGQ+ R SLACALV RP+LL+LDEPT+GLDPVLRVELW +F LA
Sbjct 123 GLREHAHHRGDELSGGQKTRASLACALVARPELLILDEPTVGLDPVLRVELWKQFHELAA 182
Query 191 RGTTLLVSSHVMDEADRCGDLLLLRQGQLLAHTTPHRLRKETGCTSLEEAFLSIV 245
GTTLLVSSHVMDEA+ C LLL+R+G+LLA +P LR TG +LE+AFL+++
Sbjct 183 AGTTLLVSSHVMDEAEHCDRLLLMREGRLLAELSPDELRARTGQDNLEKAFLTLI 237
>gi|312139863|ref|YP_004007199.1| ABC transporter ATPase [Rhodococcus equi 103S]
gi|311889202|emb|CBH48516.1| putative ABC-2 type transporter ATPase subunit [Rhodococcus equi
103S]
Length=253
Score = 273 bits (697), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 147/245 (60%), Positives = 180/245 (74%), Gaps = 0/245 (0%)
Query 2 MISSSDELLRDGADPAVIIDQLRVIRGKRLALQDVSVRVACGTITGLLGPSGSGKTTLIR 61
M + S+ A AV+I L V RG AL+DV + + G+ITGLLGPSG GKTTL+R
Sbjct 1 MTAPSEHSADPPASSAVVIQGLNVTRGGTPALRDVDLSIPRGSITGLLGPSGCGKTTLMR 60
Query 62 CIVGSQIIASGSVSVLGQPAGSAELRHRVGYMPQDPTIYNDLRVIDNIRYFAELCGVDRQ 121
C+VG+QII SG+V+VLG+PAGS L HRVGY+ Q+P++Y D+ + DN+RYFA L G
Sbjct 61 CVVGTQIIESGTVTVLGRPAGSTPLHHRVGYVTQEPSVYLDISIRDNVRYFASLYGRGHD 120
Query 122 AADEVIEAVDLRDHRTARCANLSGGQRARVSLACALVGRPDLLVLDEPTIGLDPVLRVEL 181
A ++ IEAV L H +LSGGQ RVSLACALVGRPD+LVLDEPT+GLDPVLR EL
Sbjct 121 AVEDTIEAVGLSTHADHAAGDLSGGQLGRVSLACALVGRPDVLVLDEPTVGLDPVLRAEL 180
Query 182 WDRFTALARRGTTLLVSSHVMDEADRCGDLLLLRQGQLLAHTTPHRLRKETGCTSLEEAF 241
WD F LA G TLLVSSHVMDEAD C LLLLR+G+LLAH +P LR+ TG ++LEEAF
Sbjct 181 WDHFAGLAASGATLLVSSHVMDEADHCESLLLLREGRLLAHVSPDELRRRTGKSNLEEAF 240
Query 242 LSIVR 246
L ++R
Sbjct 241 LVLIR 245
>gi|84494997|ref|ZP_00994116.1| putative ABC transporter ATP-binding protein [Janibacter sp.
HTCC2649]
gi|84384490|gb|EAQ00370.1| putative ABC transporter ATP-binding protein [Janibacter sp.
HTCC2649]
Length=255
Score = 268 bits (685), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 137/230 (60%), Positives = 170/230 (74%), Gaps = 1/230 (0%)
Query 17 AVIIDQLRVIRGKRLALQDVSVRVACGTITGLLGPSGSGKTTLIRCIVGSQIIASGSVSV 76
A++++ LRV+RG+R L D++V V G + GLLGPSG GK+TL+R IVG Q +ASGSV+V
Sbjct 15 AIVVEHLRVVRGERDVLPDLNVTVPAGQVVGLLGPSGGGKSTLMRAIVGVQKVASGSVTV 74
Query 77 LGQPAGSAELRHRVGYMPQDPTIYNDLRVIDNIRYFAELCGVDRQAADEVIEAVDLRDHR 136
LG+PAGSA LRHRVGY+ Q P++Y DL V N+ YFA++ G + A D I+AVDL H
Sbjct 75 LGEPAGSASLRHRVGYVTQSPSVYADLSVRHNLAYFAKVLGAPKDAVDRAIDAVDLASHA 134
Query 137 TARCANLSGGQRARVSLACALVGRPDLLVLDEPTIGLDPVLRVELWDRFTALAR-RGTTL 195
A NLSGGQR+RVSLA ALVG P+LLVLDEPT+GLDPVLR +LWD F LA G TL
Sbjct 135 DASVGNLSGGQRSRVSLAAALVGDPELLVLDEPTVGLDPVLRRDLWDLFRRLAHDEGRTL 194
Query 196 LVSSHVMDEADRCGDLLLLRQGQLLAHTTPHRLRKETGCTSLEEAFLSIV 245
LVSSHVMDEA RC LLLLR+G +L+ +T L TG E+AFL++V
Sbjct 195 LVSSHVMDEATRCDRLLLLREGVILSDSTLQELLARTGAPDAEQAFLALV 244
>gi|229492686|ref|ZP_04386487.1| ABC transporter ATP-binding protein [Rhodococcus erythropolis
SK121]
gi|229320345|gb|EEN86165.1| ABC transporter ATP-binding protein [Rhodococcus erythropolis
SK121]
Length=244
Score = 266 bits (680), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 141/240 (59%), Positives = 170/240 (71%), Gaps = 3/240 (1%)
Query 16 PAVIIDQLRVIRGKRLALQDVSVRVACGTITGLLGPSGSGKTTLIRCIVGSQIIASGSVS 75
PA+ I LRVIRGK L + ++V+ G+ITGLLGPSG GKTTL+R IVG+QI+ SG V
Sbjct 5 PAIDIRGLRVIRGKHEVLHSLDLQVSAGSITGLLGPSGCGKTTLMRAIVGTQIVESGEVR 64
Query 76 VLGQPAGSAELRHRVGYMPQDPTIYNDLRVIDNIRYFAELCGVDRQAADEVIEAVDLRDH 135
VLG AGS LRHRVGY+ Q P++Y DL V N++YF L G ++AV L +
Sbjct 65 VLGDLAGSVALRHRVGYVTQSPSVYGDLTVTRNVQYFGALYGKSGADVAAAVDAVGLSRY 124
Query 136 RTARCANLSGGQRARVSLACALVGRPDLLVLDEPTIGLDPVLRVELWDRFTALARRGTTL 195
A+LSGGQR RVSLACALV PD+L+LDEPT+GLDPVLRVELW+RF LAR GTTL
Sbjct 125 ADQTAADLSGGQRGRVSLACALVASPDVLILDEPTVGLDPVLRVELWERFADLARCGTTL 184
Query 196 LVSSHVMDEADRCGDLLLLRQGQLLAHTTPHRLRKETGCTSLEEAFLSIVRRTTTVPAAG 255
LVSSHVMDEAD C +L+L+R G LLA TP LR +T C LE+AFL ++R T P G
Sbjct 185 LVSSHVMDEADHCAELILMRDGHLLAQLTPDELRAKTRCERLEDAFLELIR---TSPVGG 241
>gi|226306759|ref|YP_002766719.1| ABC transporter ATP-binding protein [Rhodococcus erythropolis
PR4]
gi|226185876|dbj|BAH33980.1| putative ABC transporter ATP-binding protein [Rhodococcus erythropolis
PR4]
Length=248
Score = 264 bits (674), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 140/240 (59%), Positives = 169/240 (71%), Gaps = 3/240 (1%)
Query 16 PAVIIDQLRVIRGKRLALQDVSVRVACGTITGLLGPSGSGKTTLIRCIVGSQIIASGSVS 75
PA+ I LRVIRGK L + ++V+ G+ITGLLGPSG GKTTL+R IVG+QI+ SG V
Sbjct 9 PAIDIRGLRVIRGKHEVLHSLDLQVSAGSITGLLGPSGCGKTTLMRAIVGTQIVESGEVR 68
Query 76 VLGQPAGSAELRHRVGYMPQDPTIYNDLRVIDNIRYFAELCGVDRQAADEVIEAVDLRDH 135
VLG AGS LR RVGY+ Q P++Y DL V N++YF L G ++AV L +
Sbjct 69 VLGDLAGSVALRRRVGYVTQSPSVYGDLTVTRNVQYFGALYGKSGADVAAAVDAVGLSRY 128
Query 136 RTARCANLSGGQRARVSLACALVGRPDLLVLDEPTIGLDPVLRVELWDRFTALARRGTTL 195
A+LSGGQR RVSLACALV PD+L+LDEPT+GLDPVLRVELW+RF LAR GTTL
Sbjct 129 ADRTAADLSGGQRGRVSLACALVASPDVLILDEPTVGLDPVLRVELWERFADLARSGTTL 188
Query 196 LVSSHVMDEADRCGDLLLLRQGQLLAHTTPHRLRKETGCTSLEEAFLSIVRRTTTVPAAG 255
LVSSHVMDEAD C +L+L+R G LLA TP LR +T C LE+AFL ++R T P G
Sbjct 189 LVSSHVMDEADHCAELILMRDGHLLAQLTPDELRAKTRCERLEDAFLELIR---TSPVGG 245
>gi|159038942|ref|YP_001538195.1| ABC transporter-like protein [Salinispora arenicola CNS-205]
gi|157917777|gb|ABV99204.1| ABC transporter related [Salinispora arenicola CNS-205]
Length=245
Score = 258 bits (660), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 135/234 (58%), Positives = 165/234 (71%), Gaps = 0/234 (0%)
Query 17 AVIIDQLRVIRGKRLALQDVSVRVACGTITGLLGPSGSGKTTLIRCIVGSQIIASGSVSV 76
A+ I L V RG R L + V G +TGLLGPSGSGKTTL+R +VG Q++ SG+V+V
Sbjct 4 AIAIRDLVVDRGGRRVLHGIDTAVPRGAVTGLLGPSGSGKTTLLRALVGVQVVTSGTVTV 63
Query 77 LGQPAGSAELRHRVGYMPQDPTIYNDLRVIDNIRYFAELCGVDRQAADEVIEAVDLRDHR 136
LG+PAG+ ELR R+GY+ Q P++Y DL V +N RYFA L G AD + V LR
Sbjct 64 LGRPAGTPELRRRIGYLTQAPSVYADLTVRENARYFAALQGRGTAEADRAVADVGLRAAA 123
Query 137 TARCANLSGGQRARVSLACALVGRPDLLVLDEPTIGLDPVLRVELWDRFTALARRGTTLL 196
+ A LSGGQR R SLACALVG P+LLVLDEPT+G DPVLR ELW RF A+A GTTLL
Sbjct 124 SQLVATLSGGQRNRASLACALVGDPELLVLDEPTVGQDPVLRAELWARFHAMAANGTTLL 183
Query 197 VSSHVMDEADRCGDLLLLRQGQLLAHTTPHRLRKETGCTSLEEAFLSIVRRTTT 250
VSSHVMDEA RC LLL+R+G+L+A +TP +R TG LEEAFL +V+ + T
Sbjct 184 VSSHVMDEAARCDRLLLIREGRLIADSTPAAVRATTGVNDLEEAFLRMVQASET 237
>gi|302868882|ref|YP_003837519.1| ABC transporter-like protein [Micromonospora aurantiaca ATCC
27029]
gi|315504648|ref|YP_004083535.1| ABC transporter-like protein [Micromonospora sp. L5]
gi|302571741|gb|ADL47943.1| ABC transporter related [Micromonospora aurantiaca ATCC 27029]
gi|315411267|gb|ADU09384.1| ABC transporter related protein [Micromonospora sp. L5]
Length=240
Score = 258 bits (658), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 135/232 (59%), Positives = 165/232 (72%), Gaps = 0/232 (0%)
Query 15 DPAVIIDQLRVIRGKRLALQDVSVRVACGTITGLLGPSGSGKTTLIRCIVGSQIIASGSV 74
D AV + +L V RG R L +S V GT+TGLLGPSGSGKTTL+R +VG Q + SG+V
Sbjct 2 DDAVSVRELVVDRGGRRVLHGISCEVPRGTVTGLLGPSGSGKTTLMRAVVGVQTVGSGTV 61
Query 75 SVLGQPAGSAELRHRVGYMPQDPTIYNDLRVIDNIRYFAELCGVDRQAADEVIEAVDLRD 134
VLG+PAGSA+LR RVGY+ Q P++Y DL V +N RYFA L G R AD + V L +
Sbjct 62 DVLGRPAGSADLRRRVGYLTQAPSVYADLTVRENARYFAVLQGRGRAEADRAVADVGLAE 121
Query 135 HRTARCANLSGGQRARVSLACALVGRPDLLVLDEPTIGLDPVLRVELWDRFTALARRGTT 194
LSGGQR+R SLACALVG P+L++LDEPT+G DPVLR +LW RF A+A GTT
Sbjct 122 AADQLVGTLSGGQRSRASLACALVGEPELVILDEPTVGQDPVLRADLWARFHAMAANGTT 181
Query 195 LLVSSHVMDEADRCGDLLLLRQGQLLAHTTPHRLRKETGCTSLEEAFLSIVR 246
LLVSSHVMDEA RC LLL+R+G+L+A TP +R TG LEEAFL ++R
Sbjct 182 LLVSSHVMDEAARCDRLLLIREGRLVADDTPAAVRAATGTDDLEEAFLRLIR 233
>gi|145595692|ref|YP_001159989.1| ABC transporter-like protein [Salinispora tropica CNB-440]
gi|145305029|gb|ABP55611.1| ABC transporter related [Salinispora tropica CNB-440]
Length=245
Score = 257 bits (657), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 133/234 (57%), Positives = 165/234 (71%), Gaps = 0/234 (0%)
Query 17 AVIIDQLRVIRGKRLALQDVSVRVACGTITGLLGPSGSGKTTLIRCIVGSQIIASGSVSV 76
A++I L V RG R L + V GT+TGLLGPSGSGKTTL+R +VG Q++ +G+V+V
Sbjct 4 AIVIRDLVVDRGGRRVLHGIDATVPSGTVTGLLGPSGSGKTTLLRALVGVQVVTAGTVTV 63
Query 77 LGQPAGSAELRHRVGYMPQDPTIYNDLRVIDNIRYFAELCGVDRQAADEVIEAVDLRDHR 136
LG PAG+ +LR RVGY+ Q P+IY DL V +N RYFA L G AD + V LR
Sbjct 64 LGHPAGAPQLRRRVGYLTQAPSIYADLTVQENARYFAALQGRGTAEADRAVTDVGLRAAA 123
Query 137 TARCANLSGGQRARVSLACALVGRPDLLVLDEPTIGLDPVLRVELWDRFTALARRGTTLL 196
A LSGGQR+R SLACALVG P+LLVLDEPT+G DPVLR ELW RF A+A GTTLL
Sbjct 124 GQLVATLSGGQRSRASLACALVGDPELLVLDEPTVGQDPVLRAELWARFHAMAAAGTTLL 183
Query 197 VSSHVMDEADRCGDLLLLRQGQLLAHTTPHRLRKETGCTSLEEAFLSIVRRTTT 250
+SSHVMDEA RC LLL+R+G+L+A TP +R TG LEEAFL +++ + +
Sbjct 184 ISSHVMDEAARCDRLLLIREGRLIADDTPAAVRAATGVDDLEEAFLRMIQESES 237
>gi|302529847|ref|ZP_07282189.1| nodulation ABC transporter NodI [Streptomyces sp. AA4]
gi|302438742|gb|EFL10558.1| nodulation ABC transporter NodI [Streptomyces sp. AA4]
Length=237
Score = 256 bits (654), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 133/232 (58%), Positives = 164/232 (71%), Gaps = 0/232 (0%)
Query 15 DPAVIIDQLRVIRGKRLALQDVSVRVACGTITGLLGPSGSGKTTLIRCIVGSQIIASGSV 74
+ AV+ID LRV+RG R L+DVS RV G++TGLLGPSG GKTTL+R +VG Q+ G+V
Sbjct 3 NSAVVIDGLRVVRGGREVLRDVSFRVEPGSVTGLLGPSGCGKTTLMRAVVGVQVTHGGTV 62
Query 75 SVLGQPAGSAELRHRVGYMPQDPTIYNDLRVIDNIRYFAELCGVDRQAADEVIEAVDLRD 134
+VLG+PAGS LR R+GY Q P +Y DL V +++RYFA + G ++ + IE V L
Sbjct 63 TVLGEPAGSRRLRKRIGYATQAPAVYADLTVTESLRYFAAVLGAPARSVSDAIEQVGLGS 122
Query 135 HRTARCANLSGGQRARVSLACALVGRPDLLVLDEPTIGLDPVLRVELWDRFTALARRGTT 194
H A LSGGQR+R SLA AL+G P+LLVLDEPT+GLDP+LR LW+ F LA GTT
Sbjct 123 HADALVGRLSGGQRSRASLAVALLGEPELLVLDEPTVGLDPLLREHLWNVFHRLAADGTT 182
Query 195 LLVSSHVMDEADRCGDLLLLRQGQLLAHTTPHRLRKETGCTSLEEAFLSIVR 246
LLVSSHVMDEA RC LLL+R G LLA +P LR TG LE AFL +V+
Sbjct 183 LLVSSHVMDEAARCTRLLLMRDGALLADDSPDALRAATGEQDLERAFLHLVK 234
>gi|258650826|ref|YP_003199982.1| ABC transporter [Nakamurella multipartita DSM 44233]
gi|258554051|gb|ACV76993.1| ABC transporter related [Nakamurella multipartita DSM 44233]
Length=238
Score = 255 bits (652), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 126/230 (55%), Positives = 166/230 (73%), Gaps = 0/230 (0%)
Query 17 AVIIDQLRVIRGKRLALQDVSVRVACGTITGLLGPSGSGKTTLIRCIVGSQIIASGSVSV 76
A+ + +L V RGK L ++ R+A G ITGLLGPSG+GKTTLIR +VG Q++ +G+V+V
Sbjct 4 AITVTELVVRRGKATVLDGLTCRIAAGRITGLLGPSGAGKTTLIRAVVGVQVVRAGTVTV 63
Query 77 LGQPAGSAELRHRVGYMPQDPTIYNDLRVIDNIRYFAELCGVDRQAADEVIEAVDLRDHR 136
LG+PAG+ LR ++GY+ Q P+IY DL V +N YFA + GVDR AA IE V L +
Sbjct 64 LGRPAGTPALRDKIGYVSQSPSIYLDLTVAENTNYFAAVAGVDRSAARAAIEQVGLAEAA 123
Query 137 TARCANLSGGQRARVSLACALVGRPDLLVLDEPTIGLDPVLRVELWDRFTALARRGTTLL 196
NLSGGQ++R SLACA+VG P +LVLDEPT+GLDPVLR ELWD F AR G ++L
Sbjct 124 GQLAGNLSGGQQSRASLACAIVGDPPVLVLDEPTVGLDPVLREELWDFFAQRARDGVSVL 183
Query 197 VSSHVMDEADRCGDLLLLRQGQLLAHTTPHRLRKETGCTSLEEAFLSIVR 246
VSSHVMDEA+RC LLL+R G+LLA TP +++ G ++ AFL+++R
Sbjct 184 VSSHVMDEANRCDTLLLMRAGELLADETPAAIKQRAGTDDMDRAFLNLIR 233
>gi|238060210|ref|ZP_04604919.1| ABC transporter related [Micromonospora sp. ATCC 39149]
gi|237882021|gb|EEP70849.1| ABC transporter related [Micromonospora sp. ATCC 39149]
Length=244
Score = 254 bits (650), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 134/232 (58%), Positives = 163/232 (71%), Gaps = 0/232 (0%)
Query 15 DPAVIIDQLRVIRGKRLALQDVSVRVACGTITGLLGPSGSGKTTLIRCIVGSQIIASGSV 74
D A+ + L V RG+R L V+ V G +TGLLGPSGSGKTTL+R +VG Q + SGSV
Sbjct 2 DHAIAVRDLVVDRGRRRVLHGVTCAVPRGAVTGLLGPSGSGKTTLMRAVVGVQTVRSGSV 61
Query 75 SVLGQPAGSAELRHRVGYMPQDPTIYNDLRVIDNIRYFAELCGVDRQAADEVIEAVDLRD 134
+VLG+PAGS LR RVGY+ Q P++Y DL V +N RYFA L G R AD + V L +
Sbjct 62 TVLGRPAGSPALRSRVGYLTQAPSVYADLTVAENARYFAALHGRGRAEADRAVADVGLAN 121
Query 135 HRTARCANLSGGQRARVSLACALVGRPDLLVLDEPTIGLDPVLRVELWDRFTALARRGTT 194
+LSGGQR+R SLACALVG P+L+VLDEPT+G DPVLR +LW RF ALA GTT
Sbjct 122 AAGQLVGSLSGGQRSRASLACALVGEPELVVLDEPTVGQDPVLRADLWARFHALAAAGTT 181
Query 195 LLVSSHVMDEADRCGDLLLLRQGQLLAHTTPHRLRKETGCTSLEEAFLSIVR 246
LLVSSHVMDEA RC LLL+R+G+L+A TP +R G LEEAFL ++R
Sbjct 182 LLVSSHVMDEAARCDRLLLIREGRLVADDTPDAVRAAAGVDDLEEAFLRLIR 233
>gi|117928574|ref|YP_873125.1| ABC transporter-like protein [Acidothermus cellulolyticus 11B]
gi|117649037|gb|ABK53139.1| ABC transporter related protein [Acidothermus cellulolyticus
11B]
Length=254
Score = 251 bits (641), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 135/244 (56%), Positives = 170/244 (70%), Gaps = 4/244 (1%)
Query 4 SSSDELLRDGADP---AVIIDQLRVIRGKRLALQDVSVRVACGTITGLLGPSGSGKTTLI 60
S++DE +D A P A+ ID+L V G R L+ ++ RVA G ITGLLGPSG+GKTTL+
Sbjct 7 SAADEF-KDSAGPSADAIEIDELTVRFGSRDILRSITARVAFGRITGLLGPSGAGKTTLM 65
Query 61 RCIVGSQIIASGSVSVLGQPAGSAELRHRVGYMPQDPTIYNDLRVIDNIRYFAELCGVDR 120
R IVG Q +G V VLG+PAG+ ELRH VGY+ Q P++Y DL V +N+RYFA L VD+
Sbjct 66 RVIVGVQRFTAGGVRVLGRPAGAPELRHAVGYVTQAPSVYADLTVTENLRYFARLVDVDQ 125
Query 121 QAADEVIEAVDLRDHRTARCANLSGGQRARVSLACALVGRPDLLVLDEPTIGLDPVLRVE 180
D+++ VDLR LSGGQ +R SLA AL+GRP LLVLDEPT+GLDP+LR
Sbjct 126 TRIDDILTLVDLRTQAHQLAGTLSGGQLSRASLAIALLGRPKLLVLDEPTVGLDPLLRRS 185
Query 181 LWDRFTALARRGTTLLVSSHVMDEADRCGDLLLLRQGQLLAHTTPHRLRKETGCTSLEEA 240
LW F LA G TLLVS+HVMDEADRC DL+LLR GQ+LA T LR+ ++E+A
Sbjct 186 LWRTFHDLAADGVTLLVSTHVMDEADRCDDLMLLRDGQVLAAGTGVELRERAHAATIEDA 245
Query 241 FLSI 244
FL++
Sbjct 246 FLTL 249
>gi|330469255|ref|YP_004406998.1| ABC transporter-like protein [Verrucosispora maris AB-18-032]
gi|328812226|gb|AEB46398.1| ABC transporter related protein [Verrucosispora maris AB-18-032]
Length=243
Score = 251 bits (641), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 134/237 (57%), Positives = 161/237 (68%), Gaps = 0/237 (0%)
Query 17 AVIIDQLRVIRGKRLALQDVSVRVACGTITGLLGPSGSGKTTLIRCIVGSQIIASGSVSV 76
A+ + L V RG R L + V G++TGLLGPSGSGKTTL+R IVG Q+I +G+V+V
Sbjct 4 AIAVRGLVVDRGGRRVLDGIDAVVPGGSVTGLLGPSGSGKTTLMRAIVGVQVITAGAVTV 63
Query 77 LGQPAGSAELRHRVGYMPQDPTIYNDLRVIDNIRYFAELCGVDRQAADEVIEAVDLRDHR 136
LGQPAGSA LRHRVGY+ Q P++Y DL V +N RYFA L G AD + V L
Sbjct 64 LGQPAGSAGLRHRVGYLTQAPSVYADLTVRENARYFATLHGRGADEADRAVADVGLAAAA 123
Query 137 TARCANLSGGQRARVSLACALVGRPDLLVLDEPTIGLDPVLRVELWDRFTALARRGTTLL 196
NLSGGQR+R SLAC LVG P+L+VLDEPT+G DPVLR +LW RF LA GTTLL
Sbjct 124 RQLVGNLSGGQRSRASLACVLVGDPELIVLDEPTVGQDPVLRADLWARFHELAAAGTTLL 183
Query 197 VSSHVMDEADRCGDLLLLRQGQLLAHTTPHRLRKETGCTSLEEAFLSIVRRTTTVPA 253
VSSHVMDEA RC LLL+R G+L+A TP +R G L+EAFL ++R T A
Sbjct 184 VSSHVMDEAARCDRLLLIRAGRLVADDTPDAVRSAAGVDDLDEAFLRLIRAAETTQA 240
>gi|317123779|ref|YP_004097891.1| ABC transporter [Intrasporangium calvum DSM 43043]
gi|315587867|gb|ADU47164.1| ABC transporter related protein [Intrasporangium calvum DSM 43043]
Length=250
Score = 248 bits (633), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 134/237 (57%), Positives = 165/237 (70%), Gaps = 4/237 (1%)
Query 16 PAVIIDQLRVIRGKRLALQDVSVRVACGTITGLLGPSGSGKTTLIRCIVGSQIIASGSVS 75
PAV+I L V+RGKR L D+S+ V G + GLLGPSGSGKTTL+R IVG QII SG+V+
Sbjct 8 PAVVIRGLNVVRGKRRVLPDLSLVVPPGQVVGLLGPSGSGKTTLMRAIVGVQIIESGTVT 67
Query 76 VLGQPAGSAELRHRVGYMPQDPTIYNDLRVIDNIRYFAELCGVD----RQAADEVIEAVD 131
VLG AGS +R RVGY+ QDP++Y DL + +NI YF G+ R A D + VD
Sbjct 68 VLGHAAGSPAVRDRVGYVTQDPSVYLDLTIRENIAYFGRAVGLRGGDLRSAVDRTLVEVD 127
Query 132 LRDHRTARCANLSGGQRARVSLACALVGRPDLLVLDEPTIGLDPVLRVELWDRFTALARR 191
L H +LSGGQ +RVSLACALV RP LLVLDEPT+GLDPVLR +LW+ F LA +
Sbjct 128 LVSHADDLVRDLSGGQESRVSLACALVARPTLLVLDEPTVGLDPVLRRDLWNLFGDLATQ 187
Query 192 GTTLLVSSHVMDEADRCGDLLLLRQGQLLAHTTPHRLRKETGCTSLEEAFLSIVRRT 248
G +L+VSSHVMDEA RC L+LLR+G++LA TP L TG T + AFL++V T
Sbjct 188 GYSLIVSSHVMDEATRCDRLVLLREGRVLADVTPAELLAMTGTTDADTAFLALVEAT 244
>gi|289770948|ref|ZP_06530326.1| ABC transporter ATP-binding protein [Streptomyces lividans TK24]
gi|289701147|gb|EFD68576.1| ABC transporter ATP-binding protein [Streptomyces lividans TK24]
Length=276
Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 133/242 (55%), Positives = 168/242 (70%), Gaps = 8/242 (3%)
Query 12 DGADPAVIIDQLRVIRGKRLALQDVSVRVACGTITGLLGPSGSGKTTLIRCIVGSQIIAS 71
D A PAV + L V+RG R L+ + V G ITGLLGPSG GK+TL+R IVG+Q +
Sbjct 19 DPAPPAVHAEDLTVVRGPRTVLRGLGFTVPRGRITGLLGPSGCGKSTLMRAIVGTQAKVT 78
Query 72 GSVSVLGQPAGSAELRHRVGYMPQDPTIYNDLRVIDNIRYFAELCGVDRQAADE------ 125
G++ VLG+PAG LR R+GY+ Q P++++DL V N+ YFAE+ R A+D
Sbjct 79 GTLDVLGRPAGHPALRTRIGYVTQAPSVFDDLTVRQNLDYFAEILDPGRAASDHRRDDVT 138
Query 126 -VIEAVDLRDHRTARCANLSGGQRARVSLACALVGRPDLLVLDEPTIGLDPVLRVELWDR 184
VI VDL H A NLSGGQR+RVSLA AL+G P+LLVLDEPT+GLDPVLR +LW
Sbjct 139 RVIADVDLTAHADALAGNLSGGQRSRVSLAVALLGAPELLVLDEPTVGLDPVLRRDLWTL 198
Query 185 FTALAR-RGTTLLVSSHVMDEADRCGDLLLLRQGQLLAHTTPHRLRKETGCTSLEEAFLS 243
F ++A RG TLLVSSHVMDEA+RC LLL+R+G++LA TP LR TG ++EEAFL
Sbjct 199 FHSIAADRGATLLVSSHVMDEAERCHRLLLMREGEVLADDTPDALRTRTGSETVEEAFLH 258
Query 244 IV 245
+V
Sbjct 259 LV 260
>gi|332669396|ref|YP_004452404.1| ABC transporter-like protein [Cellulomonas fimi ATCC 484]
gi|332338434|gb|AEE45017.1| ABC transporter related protein [Cellulomonas fimi ATCC 484]
Length=265
Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 125/230 (55%), Positives = 161/230 (70%), Gaps = 0/230 (0%)
Query 16 PAVIIDQLRVIRGKRLALQDVSVRVACGTITGLLGPSGSGKTTLIRCIVGSQIIASGSVS 75
PA+ + LRV+RG + L + + V G + GLLGPSGSGKTTL+R +VG+Q++ASG V
Sbjct 6 PAITVRGLRVVRGGQAVLDGLDLTVPAGQVVGLLGPSGSGKTTLMRTVVGAQVVASGEVR 65
Query 76 VLGQPAGSAELRHRVGYMPQDPTIYNDLRVIDNIRYFAELCGVDRQAADEVIEAVDLRDH 135
VLG+PAGSA LR R+GY+ Q P++Y DL V +N+RY A + G+ ++ D I+ VDL H
Sbjct 66 VLGEPAGSAALRPRIGYVTQAPSVYVDLTVTENLRYAAAILGLGQREVDRAIDEVDLGAH 125
Query 136 RTARCANLSGGQRARVSLACALVGRPDLLVLDEPTIGLDPVLRVELWDRFTALARRGTTL 195
LSGG+R+RVSLA AL+ P+LLVLDEPT+GLDPVLR +LWD F LA G +L
Sbjct 126 ARQGIGTLSGGERSRVSLAIALLAHPELLVLDEPTVGLDPVLRRDLWDLFGRLAAGGASL 185
Query 196 LVSSHVMDEADRCGDLLLLRQGQLLAHTTPHRLRKETGCTSLEEAFLSIV 245
LVSSHVMDEA RC L+L+RQG +LA T L TG E AFL++V
Sbjct 186 LVSSHVMDEAARCDRLVLMRQGAVLADATLPELLARTGAADAEGAFLALV 235
>gi|21221769|ref|NP_627548.1| ABC transporter ATP-binding subunit [Streptomyces coelicolor
A3(2)]
gi|4803685|emb|CAB42665.1| putative ABC transporter ATP-binding subunit [Streptomyces coelicolor
A3(2)]
Length=276
Score = 242 bits (618), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 133/242 (55%), Positives = 168/242 (70%), Gaps = 8/242 (3%)
Query 12 DGADPAVIIDQLRVIRGKRLALQDVSVRVACGTITGLLGPSGSGKTTLIRCIVGSQIIAS 71
D A PAV + L V+RG R L+ + V G ITGLLGPSG GK+TL+R IVG+Q +
Sbjct 19 DPAPPAVHAEDLTVVRGPRTVLRVLGFTVPRGRITGLLGPSGCGKSTLMRAIVGTQAKVT 78
Query 72 GSVSVLGQPAGSAELRHRVGYMPQDPTIYNDLRVIDNIRYFAELCGVDRQAAD------- 124
G++ VLG+PAG LR R+GY+ Q P++++DL V N+ YFAE+ R A+D
Sbjct 79 GTLDVLGRPAGHPALRTRIGYVTQAPSVFDDLTVRQNLDYFAEILDPGRAASDRRRDDVT 138
Query 125 EVIEAVDLRDHRTARCANLSGGQRARVSLACALVGRPDLLVLDEPTIGLDPVLRVELWDR 184
VI VDL H A NLSGGQR+RVSLA AL+G P+LLVLDEPT+GLDPVLR +LW
Sbjct 139 RVIADVDLTAHADALAGNLSGGQRSRVSLAVALLGAPELLVLDEPTVGLDPVLRRDLWTL 198
Query 185 FTALAR-RGTTLLVSSHVMDEADRCGDLLLLRQGQLLAHTTPHRLRKETGCTSLEEAFLS 243
F ++A RG TLLVSSHVMDEA+RC LLL+R+G++LA TP LR TG ++EEAFL
Sbjct 199 FHSIAADRGATLLVSSHVMDEAERCHRLLLMREGEVLADDTPDALRTRTGSETVEEAFLH 258
Query 244 IV 245
+V
Sbjct 259 LV 260
>gi|284034270|ref|YP_003384201.1| ABC transporter-like protein [Kribbella flavida DSM 17836]
gi|283813563|gb|ADB35402.1| ABC transporter related protein [Kribbella flavida DSM 17836]
Length=240
Score = 242 bits (617), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 125/223 (57%), Positives = 155/223 (70%), Gaps = 0/223 (0%)
Query 25 VIRGKRLALQDVSVRVACGTITGLLGPSGSGKTTLIRCIVGSQIIASGSVSVLGQPAGSA 84
V+RG+R L V +A G++TGLLGPSG GKTTLIR IVG Q +G V VLG PAG+
Sbjct 13 VVRGEREVLHGVGFDLATGSVTGLLGPSGCGKTTLIRAIVGLQAKVTGDVRVLGLPAGAP 72
Query 85 ELRHRVGYMPQDPTIYNDLRVIDNIRYFAELCGVDRQAADEVIEAVDLRDHRTARCANLS 144
+LR R+GY+ Q+P++Y DL V +N+R+FA + G VI+AVDL H R LS
Sbjct 73 KLRGRIGYVTQEPSVYGDLTVTENLRFFAAVLGAGSAEVGRVIDAVDLGSHADVRVDRLS 132
Query 145 GGQRARVSLACALVGRPDLLVLDEPTIGLDPVLRVELWDRFTALARRGTTLLVSSHVMDE 204
GGQ++R SLA AL+G PDLLVLDEPT+GLDPVLR +LW F LA G TLLVSSHVMDE
Sbjct 133 GGQKSRASLAAALLGDPDLLVLDEPTVGLDPVLRRDLWQLFHRLAGDGATLLVSSHVMDE 192
Query 205 ADRCGDLLLLRQGQLLAHTTPHRLRKETGCTSLEEAFLSIVRR 247
A RC LLL+R G+LLA TP L G +E+AFL+++ R
Sbjct 193 ASRCDRLLLMRDGELLADDTPADLLAAAGTADIEQAFLTLIDR 235
>gi|269976993|ref|ZP_06183967.1| ABC transporter ATP-binding protein [Mobiluncus mulieris 28-1]
gi|269934824|gb|EEZ91384.1| ABC transporter ATP-binding protein [Mobiluncus mulieris 28-1]
Length=253
Score = 242 bits (617), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 127/237 (54%), Positives = 159/237 (68%), Gaps = 4/237 (1%)
Query 15 DPAVIIDQLRVIRGKRLA----LQDVSVRVACGTITGLLGPSGSGKTTLIRCIVGSQIIA 70
+PAV++D L V RGK A L +S + G+ITGLLGPSG GKTTLIR +VG+Q I
Sbjct 9 EPAVVVDDLVVTRGKGKARKEILHGISCELPTGSITGLLGPSGCGKTTLIRTVVGAQRIT 68
Query 71 SGSVSVLGQPAGSAELRHRVGYMPQDPTIYNDLRVIDNIRYFAELCGVDRQAADEVIEAV 130
SGSV VLG+PAG+ LR V Y Q+ +IY D+ V DN+ YFA L G + E IE V
Sbjct 69 SGSVRVLGEPAGTPRLRRLVSYTSQNLSIYPDISVADNVTYFARLAGAGSSSVAEAIETV 128
Query 131 DLRDHRTARCANLSGGQRARVSLACALVGRPDLLVLDEPTIGLDPVLRVELWDRFTALAR 190
L + R + LSGGQ +R SLACALVG+P LLVLDEPT+GLDP+ R LW LA
Sbjct 129 GLDEQRNQLVSTLSGGQASRTSLACALVGKPQLLVLDEPTVGLDPLTRESLWTTLRNLAN 188
Query 191 RGTTLLVSSHVMDEADRCGDLLLLRQGQLLAHTTPHRLRKETGCTSLEEAFLSIVRR 247
RG TLLVSSHVMDEA C +LL+R G+ LAH L++ T T+ E+AFL++V++
Sbjct 189 RGVTLLVSSHVMDEARHCDSVLLMRDGEFLAHEPIAHLQERTRTTNAEDAFLALVKQ 245
>gi|306819383|ref|ZP_07453090.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mobiluncus mulieris ATCC 35239]
gi|304647675|gb|EFM44993.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mobiluncus mulieris ATCC 35239]
Length=253
Score = 241 bits (616), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 126/237 (54%), Positives = 161/237 (68%), Gaps = 4/237 (1%)
Query 15 DPAVIIDQLRVIRGKRLALQDVSVRVAC----GTITGLLGPSGSGKTTLIRCIVGSQIIA 70
+PAV++D L V RGK A +++ ++C G+ITGLLG SG GKTTLIR +VG+Q I
Sbjct 9 EPAVVVDDLVVTRGKGKARKEILHGISCELPTGSITGLLGSSGCGKTTLIRTVVGAQRIT 68
Query 71 SGSVSVLGQPAGSAELRHRVGYMPQDPTIYNDLRVIDNIRYFAELCGVDRQAADEVIEAV 130
SGSV VLG+PAG+ LR V Y Q+ +IY D+ V DN+ YFA L G + E IE V
Sbjct 69 SGSVRVLGEPAGTPRLRRLVSYTSQNLSIYPDISVADNVTYFARLAGAGSSSVAEAIETV 128
Query 131 DLRDHRTARCANLSGGQRARVSLACALVGRPDLLVLDEPTIGLDPVLRVELWDRFTALAR 190
L + R + LSGGQ +R SLACALVG+P LLVLDEPT+GLDP+ R LW F LA
Sbjct 129 GLDEQRNQLVSTLSGGQASRTSLACALVGKPQLLVLDEPTVGLDPLTRESLWTTFRNLAN 188
Query 191 RGTTLLVSSHVMDEADRCGDLLLLRQGQLLAHTTPHRLRKETGCTSLEEAFLSIVRR 247
RG TLLVSSHVMDEA C +LL+R G+ LAH L++ T T+ E+AFL++V++
Sbjct 189 RGVTLLVSSHVMDEARHCDSVLLMRDGEFLAHEPIAHLQERTRTTNAEDAFLALVKQ 245
>gi|269955225|ref|YP_003325014.1| ABC transporter-like protein [Xylanimonas cellulosilytica DSM
15894]
gi|269303906|gb|ACZ29456.1| ABC transporter related protein [Xylanimonas cellulosilytica
DSM 15894]
Length=251
Score = 240 bits (612), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 127/244 (53%), Positives = 165/244 (68%), Gaps = 4/244 (1%)
Query 9 LLRDGADPAVIIDQLRVIRGKRLALQDVSVRVACGTITGLLGPSGSGKTTLIRCIVGSQI 68
++ + PA+ LRV+RG L + + V G + GLLGPSGSGKTTL+R +VG Q
Sbjct 1 MVNNSGGPAIRARGLRVVRGGTTVLDGLDLDVPAGQVVGLLGPSGSGKTTLMRSVVGVQA 60
Query 69 IASGSVSVLGQPAGSAELRHRVGYMPQDPTIYNDLRVIDNIRYFAELCGV----DRQAAD 124
+G ++VLG+PAG+ LR RVGY+ Q ++Y DL V +N+ +FA L G+ R A
Sbjct 61 NVTGDLTVLGEPAGTPGLRRRVGYVTQAASVYTDLSVTENLAHFAALAGLRGGAARSAVA 120
Query 125 EVIEAVDLRDHRTARCANLSGGQRARVSLACALVGRPDLLVLDEPTIGLDPVLRVELWDR 184
+ + AVDL H + +LSGG+R+RVSLA ALVG P+LLVLDEPT+GLDPVLR +LW
Sbjct 121 QAVTAVDLGGHEKQQVVSLSGGERSRVSLAAALVGDPELLVLDEPTVGLDPVLRRDLWTM 180
Query 185 FTALARRGTTLLVSSHVMDEADRCGDLLLLRQGQLLAHTTPHRLRKETGCTSLEEAFLSI 244
F LA +G TLLVSSHVMDEA RC LLLLR G+L+A TTP L +TG E AFL++
Sbjct 181 FHRLAEQGRTLLVSSHVMDEATRCDRLLLLRDGELVADTTPDALLAQTGAPDAERAFLAL 240
Query 245 VRRT 248
+ RT
Sbjct 241 IDRT 244
>gi|227876107|ref|ZP_03994225.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mobiluncus mulieris ATCC 35243]
gi|227843263|gb|EEJ53454.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mobiluncus mulieris ATCC 35243]
Length=253
Score = 240 bits (612), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 126/237 (54%), Positives = 160/237 (68%), Gaps = 4/237 (1%)
Query 15 DPAVIIDQLRVIRGKRLALQDVSVRVAC----GTITGLLGPSGSGKTTLIRCIVGSQIIA 70
+PAV++D L V RGK A +++ ++C G+ITGLLG SG GKTTLIR +VG+Q I
Sbjct 9 EPAVVVDDLVVTRGKGKARKEILHGISCELPTGSITGLLGSSGCGKTTLIRTVVGAQRIT 68
Query 71 SGSVSVLGQPAGSAELRHRVGYMPQDPTIYNDLRVIDNIRYFAELCGVDRQAADEVIEAV 130
SGSV VLG PAG+ LR V Y Q+ +IY D+ V DN+ YFA L G + E IE V
Sbjct 69 SGSVRVLGGPAGTPRLRRLVSYTSQNLSIYPDISVADNVTYFARLAGAGSSSVAEAIETV 128
Query 131 DLRDHRTARCANLSGGQRARVSLACALVGRPDLLVLDEPTIGLDPVLRVELWDRFTALAR 190
L + R + LSGGQ +R SLACALVG+P LLVLDEPT+GLDP+ R LW F LA
Sbjct 129 GLDEQRNQLVSTLSGGQASRTSLACALVGKPQLLVLDEPTVGLDPLTRESLWTTFRNLAN 188
Query 191 RGTTLLVSSHVMDEADRCGDLLLLRQGQLLAHTTPHRLRKETGCTSLEEAFLSIVRR 247
RG TLLVSSHVMDEA C +LL+R G+ LAH L++ T T+ E+AFL++V++
Sbjct 189 RGVTLLVSSHVMDEARHCDSVLLMRDGEFLAHEPIAHLQERTRTTNAEDAFLALVKQ 245
>gi|307701687|ref|ZP_07638703.1| ABC transporter, ATP-binding protein [Mobiluncus mulieris FB024-16]
gi|307613190|gb|EFN92443.1| ABC transporter, ATP-binding protein [Mobiluncus mulieris FB024-16]
Length=253
Score = 239 bits (611), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 126/237 (54%), Positives = 160/237 (68%), Gaps = 4/237 (1%)
Query 15 DPAVIIDQLRVIRGKRLALQDVSVRVAC----GTITGLLGPSGSGKTTLIRCIVGSQIIA 70
+PAV++D L V RGK A +++ ++C G+ITGLLG SG GKTTLIR +VG+Q I
Sbjct 9 EPAVVVDDLVVTRGKGKARKEILHGISCELPTGSITGLLGSSGCGKTTLIRTVVGAQRIT 68
Query 71 SGSVSVLGQPAGSAELRHRVGYMPQDPTIYNDLRVIDNIRYFAELCGVDRQAADEVIEAV 130
SGSV VLG PAG+ LR V Y Q+ +IY D+ V DN+ YFA L G + E IE V
Sbjct 69 SGSVRVLGGPAGTPRLRRLVSYTSQNLSIYPDISVADNVTYFARLAGAGSSSVAEAIETV 128
Query 131 DLRDHRTARCANLSGGQRARVSLACALVGRPDLLVLDEPTIGLDPVLRVELWDRFTALAR 190
L + R + LSGGQ +R SLACALVG+P LLVLDEPT+GLDP+ R LW F LA
Sbjct 129 GLDEQRNQLVSTLSGGQASRTSLACALVGKPQLLVLDEPTVGLDPLTRESLWTTFRNLAN 188
Query 191 RGTTLLVSSHVMDEADRCGDLLLLRQGQLLAHTTPHRLRKETGCTSLEEAFLSIVRR 247
RG TLLVSSHVMDEA C +LL+R G+ LAH L++ T T+ E+AFL++V++
Sbjct 189 RGVTLLVSSHVMDEARHCDSVLLMRDGEFLAHEPIAHLQERTRTTNAEDAFLALVKQ 245
>gi|333921259|ref|YP_004494840.1| ABC transporter-like protein [Amycolicicoccus subflavus DQS3-9A1]
gi|333483480|gb|AEF42040.1| ABC transporter-like protein [Amycolicicoccus subflavus DQS3-9A1]
Length=236
Score = 239 bits (611), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 127/233 (55%), Positives = 160/233 (69%), Gaps = 1/233 (0%)
Query 17 AVIIDQLRVIRGKRLALQDVSVRVACGTITGLLGPSGSGKTTLIRCIVGSQIIASGSVSV 76
A+ + L V RG R ++ V GT+TGLLGPSGSGKTTLIR +VG QI SGSV V
Sbjct 4 AITVRALTVHRGGRPIFDSLTFTVEAGTVTGLLGPSGSGKTTLIRSVVGVQITKSGSVEV 63
Query 77 LGQPAGSAELRHRVGYMPQDPTIYNDLRVIDNIRYFAELCGVDRQAADEVIEAVDLRD-H 135
LG+PAGS LR RV Y+ Q+P+IY+DL + +N+ YFA L G + A+ I AV L
Sbjct 64 LGEPAGSPSLRSRVRYVTQEPSIYSDLTIAENVGYFATLYGCTKPEAERAIAAVHLDTLP 123
Query 136 RTARCANLSGGQRARVSLACALVGRPDLLVLDEPTIGLDPVLRVELWDRFTALARRGTTL 195
R +LSGGQR RV+LACALVG P++LVLDEPT+GLDPVLR +LW F +A GT++
Sbjct 124 RKQLVRDLSGGQRTRVTLACALVGAPEVLVLDEPTVGLDPVLREDLWRMFHRIADDGTSI 183
Query 196 LVSSHVMDEADRCGDLLLLRQGQLLAHTTPHRLRKETGCTSLEEAFLSIVRRT 248
L+SSHVMDEA RC LL +R G+L+A TP +R TG LE+AFL++ T
Sbjct 184 LISSHVMDEARRCDRLLFMRDGRLIADDTPADIRTRTGQDDLEDAFLALASHT 236
>gi|297201458|ref|ZP_06918855.1| nodulation ABC transporter NodI [Streptomyces sviceus ATCC 29083]
gi|197713866|gb|EDY57900.1| nodulation ABC transporter NodI [Streptomyces sviceus ATCC 29083]
Length=271
Score = 239 bits (609), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 130/248 (53%), Positives = 168/248 (68%), Gaps = 8/248 (3%)
Query 6 SDELLRDGADPAVIIDQLRVIRGKRLALQDVSVRVACGTITGLLGPSGSGKTTLIRCIVG 65
+D + A PAV D L V+RG R L+ ++ V G ITGLLGPSG GK+TL+R IVG
Sbjct 10 ADRTDEEPATPAVHADGLTVVRGPRTVLRGLAFDVPRGQITGLLGPSGCGKSTLMRSIVG 69
Query 66 SQIIASGSVSVLGQPAGSAELRHRVGYMPQDPTIYNDLRVIDNIRYFAELCGVDRQAAD- 124
+Q +G++ VLG+PAG LR R+GY+ Q P++Y+DL V N+ YFA + R A +
Sbjct 70 TQAKVTGTLDVLGRPAGHPTLRTRIGYVTQAPSVYDDLTVRQNLDYFAAILAPGRAAVER 129
Query 125 ------EVIEAVDLRDHRTARCANLSGGQRARVSLACALVGRPDLLVLDEPTIGLDPVLR 178
I+ VDL H + NLSGGQR+RVSLA AL+G P+LLVLDEPT+GLDPVLR
Sbjct 130 RRTDVTRAIDDVDLATHADSLAGNLSGGQRSRVSLAVALLGTPELLVLDEPTVGLDPVLR 189
Query 179 VELWDRFTAL-ARRGTTLLVSSHVMDEADRCGDLLLLRQGQLLAHTTPHRLRKETGCTSL 237
+LW+ F + ARRG TLL+SSHVMDEA+RC LLL+R+GQ+LA TP LR T ++
Sbjct 190 RDLWNLFHDIAARRGATLLISSHVMDEAERCHRLLLMREGQILADDTPEALRTRTDTDTV 249
Query 238 EEAFLSIV 245
E AFL +V
Sbjct 250 ESAFLHLV 257
Lambda K H
0.322 0.138 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 374688414660
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40