BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1696 Length=587 Score E Sequences producing significant alignments: (Bits) Value gi|15608834|ref|NP_216212.1| DNA repair protein recN (recombinat... 1128 0.0 gi|289554532|ref|ZP_06443742.1| DNA repair protein recN [Mycobac... 1127 0.0 gi|289753786|ref|ZP_06513164.1| DNA repair protein recN [Mycobac... 1126 0.0 gi|339631750|ref|YP_004723392.1| recombination protein N [Mycoba... 1125 0.0 gi|15841153|ref|NP_336190.1| DNA repair protein RecN [Mycobacter... 1124 0.0 gi|240170145|ref|ZP_04748804.1| putative DNA repair protein [Myc... 945 0.0 gi|289750252|ref|ZP_06509630.1| DNA repair protein recN [Mycobac... 894 0.0 gi|118617313|ref|YP_905645.1| DNA repair protein, RecN [Mycobact... 849 0.0 gi|183982516|ref|YP_001850807.1| DNA repair protein, RecN [Mycob... 848 0.0 gi|15827707|ref|NP_301970.1| recombination and DNA repair [Mycob... 848 0.0 gi|296164596|ref|ZP_06847163.1| DNA repair protein RecN [Mycobac... 847 0.0 gi|118466477|ref|YP_882259.1| DNA repair protein RecN [Mycobacte... 826 0.0 gi|41407501|ref|NP_960337.1| hypothetical protein MAP1403 [Mycob... 824 0.0 gi|254775527|ref|ZP_05217043.1| DNA repair protein RecN [Mycobac... 821 0.0 gi|254821090|ref|ZP_05226091.1| DNA repair protein RecN [Mycobac... 817 0.0 gi|342860726|ref|ZP_08717376.1| DNA repair protein RecN [Mycobac... 799 0.0 gi|333990492|ref|YP_004523106.1| DNA repair protein RecN [Mycoba... 776 0.0 gi|120404263|ref|YP_954092.1| DNA repair protein RecN [Mycobacte... 752 0.0 gi|145224091|ref|YP_001134769.1| DNA repair protein RecN [Mycoba... 743 0.0 gi|126435543|ref|YP_001071234.1| DNA repair protein RecN [Mycoba... 708 0.0 gi|108799915|ref|YP_640112.1| DNA repair protein RecN [Mycobacte... 707 0.0 gi|336441054|gb|AEI54752.1| DNA repair protein RecN [Mycobacteri... 697 0.0 gi|336441056|gb|AEI54753.1| DNA repair protein RecN [Mycobacteri... 696 0.0 gi|336441058|gb|AEI54754.1| DNA repair protein RecN [Mycobacteri... 694 0.0 gi|336441052|gb|AEI54751.1| DNA repair protein RecN [Mycobacteri... 693 0.0 gi|336441050|gb|AEI54750.1| DNA repair protein RecN [Mycobacteri... 688 0.0 gi|169629447|ref|YP_001703096.1| DNA repair protein RecN [Mycoba... 687 0.0 gi|307084281|ref|ZP_07493394.1| putative DNA repair protein RecN... 638 0.0 gi|54023966|ref|YP_118208.1| putative DNA repair protein [Nocard... 602 6e-170 gi|312139855|ref|YP_004007191.1| DNA repair protein recn [Rhodoc... 596 3e-168 gi|229494835|ref|ZP_04388589.1| DNA repair protein RecN [Rhodoco... 595 7e-168 gi|226306752|ref|YP_002766712.1| DNA repair protein RecN [Rhodoc... 595 8e-168 gi|307084280|ref|ZP_07493393.1| putative DNA repair protein RecN... 593 2e-167 gi|325674268|ref|ZP_08153957.1| DNA repair protein RecN [Rhodoco... 592 7e-167 gi|226360081|ref|YP_002777859.1| DNA repair protein RecN [Rhodoc... 589 5e-166 gi|333919196|ref|YP_004492777.1| DNA repair protein RecN [Amycol... 573 2e-161 gi|111017951|ref|YP_700923.1| DNA repair protein RecN [Rhodococc... 571 2e-160 gi|296140083|ref|YP_003647326.1| DNA repair protein RecN [Tsukam... 561 1e-157 gi|257056534|ref|YP_003134366.1| DNA replication and repair prot... 557 2e-156 gi|302528023|ref|ZP_07280365.1| DNA repair protein RecN [Strepto... 557 2e-156 gi|343928400|ref|ZP_08767848.1| DNA repair protein RecN [Gordoni... 543 4e-152 gi|291003075|ref|ZP_06561048.1| recombination and DNA repair pro... 539 6e-151 gi|134101752|ref|YP_001107413.1| recombination and DNA repair pr... 538 1e-150 gi|300787878|ref|YP_003768169.1| DNA repair protein RecN [Amycol... 537 2e-150 gi|340529450|gb|AEK44655.1| DNA repair protein RecN [Amycolatops... 536 6e-150 gi|262202725|ref|YP_003273933.1| DNA repair protein RecN [Gordon... 535 1e-149 gi|326384766|ref|ZP_08206443.1| DNA repair protein RecN [Gordoni... 525 1e-146 gi|25028104|ref|NP_738158.1| putative DNA repair protein RecN [C... 515 1e-143 gi|259507160|ref|ZP_05750060.1| DNA repair protein RecN [Coryneb... 514 1e-143 gi|344045130|gb|EGV40804.1| DNA repair protein RECN [Corynebacte... 513 3e-143 >gi|15608834|ref|NP_216212.1| DNA repair protein recN (recombination protein N) [Mycobacterium tuberculosis H37Rv] gi|31792882|ref|NP_855375.1| DNA repair protein recN (recombination protein N) [Mycobacterium bovis AF2122/97] gi|121637603|ref|YP_977826.1| putative DNA repair protein recN [Mycobacterium bovis BCG str. Pasteur 1173P2] 66 more sequence titles Length=587 Score = 1128 bits (2917), Expect = 0.0, Method: Compositional matrix adjust. Identities = 586/587 (99%), Positives = 587/587 (100%), Gaps = 0/587 (0%) Query 1 VLTELRIESLGAISVATAEFDRGFTVLTGETGTGKTMVVTGLHLLGGARADATRVRSGAD 60 +LTELRIESLGAISVATAEFDRGFTVLTGETGTGKTMVVTGLHLLGGARADATRVRSGAD Sbjct 1 MLTELRIESLGAISVATAEFDRGFTVLTGETGTGKTMVVTGLHLLGGARADATRVRSGAD 60 Query 61 RAVVEGRFTTTDLDDATVAGLQAVLDSSGAERDEDGSVIALRSISRDGPSRAYLGGRGVP 120 RAVVEGRFTTTDLDDATVAGLQAVLDSSGAERDEDGSVIALRSISRDGPSRAYLGGRGVP Sbjct 61 RAVVEGRFTTTDLDDATVAGLQAVLDSSGAERDEDGSVIALRSISRDGPSRAYLGGRGVP 120 Query 121 AKSLSGFTNELLTLHGQNDQLRLMRPDEQRGALDRFAAAGEAVQRYRKLRDAWLTARRDL 180 AKSLSGFTNELLTLHGQNDQLRLMRPDEQRGALDRFAAAGEAVQRYRKLRDAWLTARRDL Sbjct 121 AKSLSGFTNELLTLHGQNDQLRLMRPDEQRGALDRFAAAGEAVQRYRKLRDAWLTARRDL 180 Query 181 VDRRNRARELAQEADRLKFALNEIDTVDPQPGEDVALVADIARLSELDTLREAATTARAT 240 VDRRNRARELAQEADRLKFALNEIDTVDPQPGEDVALVADIARLSELDTLREAATTARAT Sbjct 181 VDRRNRARELAQEADRLKFALNEIDTVDPQPGEDVALVADIARLSELDTLREAATTARAT 240 Query 241 LCGTPDADAFDRGAVDSLGRARAALQSSDDAALRGLAEQVGEALTVVVDAVAELGAYLDE 300 LCGTPDADAFDRGAVDSLGRARAALQSSDDAALRGLAEQVGEALTVVVDAVAELGAYLDE Sbjct 241 LCGTPDADAFDRGAVDSLGRARAALQSSDDAALRGLAEQVGEALTVVVDAVAELGAYLDE 300 Query 301 LPADASALDAKLARQAQLRTLTRKYAADIDGVLRWADEARARLAQLDVSEEGLAALERRT 360 LPADASALDAKLARQAQLRTLTRKYAADIDGVLRWADEARARLAQLDVSEEGLAALERRT Sbjct 301 LPADASALDAKLARQAQLRTLTRKYAADIDGVLRWADEARARLAQLDVSEEGLAALERRT 360 Query 361 GELAHELGQAAVDLSTIRRKAAKRLAKEVSAELSALAMADAEFTIGVTTELADHGDPVAL 420 GELAHELGQAAVDLSTIRRKAAKRLAKEVSAELSALAMADAEFTIGVTTELADHGDPVAL Sbjct 361 GELAHELGQAAVDLSTIRRKAAKRLAKEVSAELSALAMADAEFTIGVTTELADHGDPVAL 420 Query 421 ALASGELARAGADGVDAVEFGFVAHRGMTVLPLAKSASGGELSRVMLSLEVVLATSRKQA 480 ALASGELARAGADGVDAVEFGFVAHRGMTVLPLAKSASGGELSRVMLSLEVVLATSRKQA Sbjct 421 ALASGELARAGADGVDAVEFGFVAHRGMTVLPLAKSASGGELSRVMLSLEVVLATSRKQA 480 Query 481 AGTTMVFDEIDAGVGGWAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLMVQRTGRD 540 AGTTMVFDEIDAGVGGWAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLMVQRTGRD Sbjct 481 AGTTMVFDEIDAGVGGWAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLMVQRTGRD 540 Query 541 GASGVRRLTSEDRVAELARMLAGLGDSDSGRAHARELLETAQNDELT 587 GASGVRRLTSEDRVAELARMLAGLGDSDSGRAHARELLETAQNDELT Sbjct 541 GASGVRRLTSEDRVAELARMLAGLGDSDSGRAHARELLETAQNDELT 587 >gi|289554532|ref|ZP_06443742.1| DNA repair protein recN [Mycobacterium tuberculosis KZN 605] gi|289439164|gb|EFD21657.1| DNA repair protein recN [Mycobacterium tuberculosis KZN 605] Length=586 Score = 1127 bits (2914), Expect = 0.0, Method: Compositional matrix adjust. Identities = 585/586 (99%), Positives = 586/586 (100%), Gaps = 0/586 (0%) Query 2 LTELRIESLGAISVATAEFDRGFTVLTGETGTGKTMVVTGLHLLGGARADATRVRSGADR 61 +TELRIESLGAISVATAEFDRGFTVLTGETGTGKTMVVTGLHLLGGARADATRVRSGADR Sbjct 1 MTELRIESLGAISVATAEFDRGFTVLTGETGTGKTMVVTGLHLLGGARADATRVRSGADR 60 Query 62 AVVEGRFTTTDLDDATVAGLQAVLDSSGAERDEDGSVIALRSISRDGPSRAYLGGRGVPA 121 AVVEGRFTTTDLDDATVAGLQAVLDSSGAERDEDGSVIALRSISRDGPSRAYLGGRGVPA Sbjct 61 AVVEGRFTTTDLDDATVAGLQAVLDSSGAERDEDGSVIALRSISRDGPSRAYLGGRGVPA 120 Query 122 KSLSGFTNELLTLHGQNDQLRLMRPDEQRGALDRFAAAGEAVQRYRKLRDAWLTARRDLV 181 KSLSGFTNELLTLHGQNDQLRLMRPDEQRGALDRFAAAGEAVQRYRKLRDAWLTARRDLV Sbjct 121 KSLSGFTNELLTLHGQNDQLRLMRPDEQRGALDRFAAAGEAVQRYRKLRDAWLTARRDLV 180 Query 182 DRRNRARELAQEADRLKFALNEIDTVDPQPGEDVALVADIARLSELDTLREAATTARATL 241 DRRNRARELAQEADRLKFALNEIDTVDPQPGEDVALVADIARLSELDTLREAATTARATL Sbjct 181 DRRNRARELAQEADRLKFALNEIDTVDPQPGEDVALVADIARLSELDTLREAATTARATL 240 Query 242 CGTPDADAFDRGAVDSLGRARAALQSSDDAALRGLAEQVGEALTVVVDAVAELGAYLDEL 301 CGTPDADAFDRGAVDSLGRARAALQSSDDAALRGLAEQVGEALTVVVDAVAELGAYLDEL Sbjct 241 CGTPDADAFDRGAVDSLGRARAALQSSDDAALRGLAEQVGEALTVVVDAVAELGAYLDEL 300 Query 302 PADASALDAKLARQAQLRTLTRKYAADIDGVLRWADEARARLAQLDVSEEGLAALERRTG 361 PADASALDAKLARQAQLRTLTRKYAADIDGVLRWADEARARLAQLDVSEEGLAALERRTG Sbjct 301 PADASALDAKLARQAQLRTLTRKYAADIDGVLRWADEARARLAQLDVSEEGLAALERRTG 360 Query 362 ELAHELGQAAVDLSTIRRKAAKRLAKEVSAELSALAMADAEFTIGVTTELADHGDPVALA 421 ELAHELGQAAVDLSTIRRKAAKRLAKEVSAELSALAMADAEFTIGVTTELADHGDPVALA Sbjct 361 ELAHELGQAAVDLSTIRRKAAKRLAKEVSAELSALAMADAEFTIGVTTELADHGDPVALA 420 Query 422 LASGELARAGADGVDAVEFGFVAHRGMTVLPLAKSASGGELSRVMLSLEVVLATSRKQAA 481 LASGELARAGADGVDAVEFGFVAHRGMTVLPLAKSASGGELSRVMLSLEVVLATSRKQAA Sbjct 421 LASGELARAGADGVDAVEFGFVAHRGMTVLPLAKSASGGELSRVMLSLEVVLATSRKQAA 480 Query 482 GTTMVFDEIDAGVGGWAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLMVQRTGRDG 541 GTTMVFDEIDAGVGGWAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLMVQRTGRDG Sbjct 481 GTTMVFDEIDAGVGGWAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLMVQRTGRDG 540 Query 542 ASGVRRLTSEDRVAELARMLAGLGDSDSGRAHARELLETAQNDELT 587 ASGVRRLTSEDRVAELARMLAGLGDSDSGRAHARELLETAQNDELT Sbjct 541 ASGVRRLTSEDRVAELARMLAGLGDSDSGRAHARELLETAQNDELT 586 >gi|289753786|ref|ZP_06513164.1| DNA repair protein recN [Mycobacterium tuberculosis EAS054] gi|289694373|gb|EFD61802.1| DNA repair protein recN [Mycobacterium tuberculosis EAS054] Length=587 Score = 1126 bits (2912), Expect = 0.0, Method: Compositional matrix adjust. Identities = 585/587 (99%), Positives = 586/587 (99%), Gaps = 0/587 (0%) Query 1 VLTELRIESLGAISVATAEFDRGFTVLTGETGTGKTMVVTGLHLLGGARADATRVRSGAD 60 +LTELRIESLGAISVATAEFDRGFTVLTGETGTGKTMVVTGLHLLGGARADATRVRSGAD Sbjct 1 MLTELRIESLGAISVATAEFDRGFTVLTGETGTGKTMVVTGLHLLGGARADATRVRSGAD 60 Query 61 RAVVEGRFTTTDLDDATVAGLQAVLDSSGAERDEDGSVIALRSISRDGPSRAYLGGRGVP 120 RAVVEGRFTTTDLDDATVAGLQAVLDSSGAERDEDGSVIALRSISRDGPSRAYLGGRGVP Sbjct 61 RAVVEGRFTTTDLDDATVAGLQAVLDSSGAERDEDGSVIALRSISRDGPSRAYLGGRGVP 120 Query 121 AKSLSGFTNELLTLHGQNDQLRLMRPDEQRGALDRFAAAGEAVQRYRKLRDAWLTARRDL 180 AKSLSGFTNELLTLHGQNDQLRLMRPDEQRGALDRFAAAGEAVQRYRKLRDAWLTARRDL Sbjct 121 AKSLSGFTNELLTLHGQNDQLRLMRPDEQRGALDRFAAAGEAVQRYRKLRDAWLTARRDL 180 Query 181 VDRRNRARELAQEADRLKFALNEIDTVDPQPGEDVALVADIARLSELDTLREAATTARAT 240 VDRRNRARELAQEADRLKFALNEIDTVDPQPGEDVALVADIARLSELDTLREAATTARAT Sbjct 181 VDRRNRARELAQEADRLKFALNEIDTVDPQPGEDVALVADIARLSELDTLREAATTARAT 240 Query 241 LCGTPDADAFDRGAVDSLGRARAALQSSDDAALRGLAEQVGEALTVVVDAVAELGAYLDE 300 LCGTPDADAFDRGAVDSLGRARAALQSSDDAALRGLAEQVGEALTVVVDAVAELGAYLDE Sbjct 241 LCGTPDADAFDRGAVDSLGRARAALQSSDDAALRGLAEQVGEALTVVVDAVAELGAYLDE 300 Query 301 LPADASALDAKLARQAQLRTLTRKYAADIDGVLRWADEARARLAQLDVSEEGLAALERRT 360 LPADASALDAKLARQAQLRTLTRKYAADIDGVLRWADEARARLAQLDVSEEGLAALERRT Sbjct 301 LPADASALDAKLARQAQLRTLTRKYAADIDGVLRWADEARARLAQLDVSEEGLAALERRT 360 Query 361 GELAHELGQAAVDLSTIRRKAAKRLAKEVSAELSALAMADAEFTIGVTTELADHGDPVAL 420 GELAHELGQAAVDLS IRRKAAKRLAKEVSAELSALAMADAEFTIGVTTELADHGDPVAL Sbjct 361 GELAHELGQAAVDLSMIRRKAAKRLAKEVSAELSALAMADAEFTIGVTTELADHGDPVAL 420 Query 421 ALASGELARAGADGVDAVEFGFVAHRGMTVLPLAKSASGGELSRVMLSLEVVLATSRKQA 480 ALASGELARAGADGVDAVEFGFVAHRGMTVLPLAKSASGGELSRVMLSLEVVLATSRKQA Sbjct 421 ALASGELARAGADGVDAVEFGFVAHRGMTVLPLAKSASGGELSRVMLSLEVVLATSRKQA 480 Query 481 AGTTMVFDEIDAGVGGWAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLMVQRTGRD 540 AGTTMVFDEIDAGVGGWAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLMVQRTGRD Sbjct 481 AGTTMVFDEIDAGVGGWAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLMVQRTGRD 540 Query 541 GASGVRRLTSEDRVAELARMLAGLGDSDSGRAHARELLETAQNDELT 587 GASGVRRLTSEDRVAELARMLAGLGDSDSGRAHARELLETAQNDELT Sbjct 541 GASGVRRLTSEDRVAELARMLAGLGDSDSGRAHARELLETAQNDELT 587 >gi|339631750|ref|YP_004723392.1| recombination protein N [Mycobacterium africanum GM041182] gi|339331106|emb|CCC26784.1| putative DNA repair protein RECN (recombination protein N) [Mycobacterium africanum GM041182] Length=587 Score = 1125 bits (2910), Expect = 0.0, Method: Compositional matrix adjust. Identities = 585/587 (99%), Positives = 586/587 (99%), Gaps = 0/587 (0%) Query 1 VLTELRIESLGAISVATAEFDRGFTVLTGETGTGKTMVVTGLHLLGGARADATRVRSGAD 60 +LTELRIESLGAISVATAEFDRGFTVLTGETGTGKTMVVTGLHLLGGARADATRVRSGAD Sbjct 1 MLTELRIESLGAISVATAEFDRGFTVLTGETGTGKTMVVTGLHLLGGARADATRVRSGAD 60 Query 61 RAVVEGRFTTTDLDDATVAGLQAVLDSSGAERDEDGSVIALRSISRDGPSRAYLGGRGVP 120 AVVEGRFTTTDLDDATVAGLQAVLDSSGAERDEDGSVIALRSISRDGPSRAYLGGRGVP Sbjct 61 SAVVEGRFTTTDLDDATVAGLQAVLDSSGAERDEDGSVIALRSISRDGPSRAYLGGRGVP 120 Query 121 AKSLSGFTNELLTLHGQNDQLRLMRPDEQRGALDRFAAAGEAVQRYRKLRDAWLTARRDL 180 AKSLSGFTNELLTLHGQNDQLRLMRPDEQRGALDRFAAAGEAVQRYRKLRDAWLTARRDL Sbjct 121 AKSLSGFTNELLTLHGQNDQLRLMRPDEQRGALDRFAAAGEAVQRYRKLRDAWLTARRDL 180 Query 181 VDRRNRARELAQEADRLKFALNEIDTVDPQPGEDVALVADIARLSELDTLREAATTARAT 240 VDRRNRARELAQEADRLKFALNEIDTVDPQPGEDVALVADIARLSELDTLREAATTARAT Sbjct 181 VDRRNRARELAQEADRLKFALNEIDTVDPQPGEDVALVADIARLSELDTLREAATTARAT 240 Query 241 LCGTPDADAFDRGAVDSLGRARAALQSSDDAALRGLAEQVGEALTVVVDAVAELGAYLDE 300 LCGTPDADAFDRGAVDSLGRARAALQSSDDAALRGLAEQVGEALTVVVDAVAELGAYLDE Sbjct 241 LCGTPDADAFDRGAVDSLGRARAALQSSDDAALRGLAEQVGEALTVVVDAVAELGAYLDE 300 Query 301 LPADASALDAKLARQAQLRTLTRKYAADIDGVLRWADEARARLAQLDVSEEGLAALERRT 360 LPADASALDAKLARQAQLRTLTRKYAADIDGVLRWADEARARLAQLDVSEEGLAALERRT Sbjct 301 LPADASALDAKLARQAQLRTLTRKYAADIDGVLRWADEARARLAQLDVSEEGLAALERRT 360 Query 361 GELAHELGQAAVDLSTIRRKAAKRLAKEVSAELSALAMADAEFTIGVTTELADHGDPVAL 420 GELAHELGQAAVDLSTIRRKAAKRLAKEVSAELSALAMADAEFTIGVTTELADHGDPVAL Sbjct 361 GELAHELGQAAVDLSTIRRKAAKRLAKEVSAELSALAMADAEFTIGVTTELADHGDPVAL 420 Query 421 ALASGELARAGADGVDAVEFGFVAHRGMTVLPLAKSASGGELSRVMLSLEVVLATSRKQA 480 ALASGELARAGADGVDAVEFGFVAHRGMTVLPLAKSASGGELSRVMLSLEVVLATSRKQA Sbjct 421 ALASGELARAGADGVDAVEFGFVAHRGMTVLPLAKSASGGELSRVMLSLEVVLATSRKQA 480 Query 481 AGTTMVFDEIDAGVGGWAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLMVQRTGRD 540 AGTTMVFDEIDAGVGGWAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLMVQRTGRD Sbjct 481 AGTTMVFDEIDAGVGGWAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLMVQRTGRD 540 Query 541 GASGVRRLTSEDRVAELARMLAGLGDSDSGRAHARELLETAQNDELT 587 GASGVRRLTSEDRVAELARMLAGLGDSDSGRAHARELLETAQNDELT Sbjct 541 GASGVRRLTSEDRVAELARMLAGLGDSDSGRAHARELLETAQNDELT 587 >gi|15841153|ref|NP_336190.1| DNA repair protein RecN [Mycobacterium tuberculosis CDC1551] gi|13881372|gb|AAK46004.1| DNA repair protein RecN [Mycobacterium tuberculosis CDC1551] gi|323719786|gb|EGB28900.1| DNA repair protein recN [Mycobacterium tuberculosis CDC1551A] Length=587 Score = 1124 bits (2908), Expect = 0.0, Method: Compositional matrix adjust. Identities = 585/587 (99%), Positives = 586/587 (99%), Gaps = 0/587 (0%) Query 1 VLTELRIESLGAISVATAEFDRGFTVLTGETGTGKTMVVTGLHLLGGARADATRVRSGAD 60 +LTELRIESLGAISVATAEFDRGFTVLTGETGTGKTMVVTGLHLLGGARADATRVRSGAD Sbjct 1 MLTELRIESLGAISVATAEFDRGFTVLTGETGTGKTMVVTGLHLLGGARADATRVRSGAD 60 Query 61 RAVVEGRFTTTDLDDATVAGLQAVLDSSGAERDEDGSVIALRSISRDGPSRAYLGGRGVP 120 RAVVEGRFTTTDLDDATVAGLQAVLDSSGAERDEDGSVIALRSISRDGPSRAYLGGRGVP Sbjct 61 RAVVEGRFTTTDLDDATVAGLQAVLDSSGAERDEDGSVIALRSISRDGPSRAYLGGRGVP 120 Query 121 AKSLSGFTNELLTLHGQNDQLRLMRPDEQRGALDRFAAAGEAVQRYRKLRDAWLTARRDL 180 AKSLSGFTNELLTLHGQNDQLRLMRPDEQRGALDRFAAAGEAVQRYRKLRDAWLTARRDL Sbjct 121 AKSLSGFTNELLTLHGQNDQLRLMRPDEQRGALDRFAAAGEAVQRYRKLRDAWLTARRDL 180 Query 181 VDRRNRARELAQEADRLKFALNEIDTVDPQPGEDVALVADIARLSELDTLREAATTARAT 240 VDRRNRARELAQEADRLKFALNEIDTVDPQPGEDVALVADIARLSELDTLREAATTARAT Sbjct 181 VDRRNRARELAQEADRLKFALNEIDTVDPQPGEDVALVADIARLSELDTLREAATTARAT 240 Query 241 LCGTPDADAFDRGAVDSLGRARAALQSSDDAALRGLAEQVGEALTVVVDAVAELGAYLDE 300 LCGTPDADAFDRGAVDSLGRARAALQSSDDAALRGLAEQVGEALTVVVDAVAELGAYLDE Sbjct 241 LCGTPDADAFDRGAVDSLGRARAALQSSDDAALRGLAEQVGEALTVVVDAVAELGAYLDE 300 Query 301 LPADASALDAKLARQAQLRTLTRKYAADIDGVLRWADEARARLAQLDVSEEGLAALERRT 360 LPADASALDAKLARQAQLRTLTRKYAADIDGVLRWADEARARLAQLDVSEEGLAALERRT Sbjct 301 LPADASALDAKLARQAQLRTLTRKYAADIDGVLRWADEARARLAQLDVSEEGLAALERRT 360 Query 361 GELAHELGQAAVDLSTIRRKAAKRLAKEVSAELSALAMADAEFTIGVTTELADHGDPVAL 420 GELAHELGQAAVDLSTIRRKAAKRLAKEVSAELSALAMADAEFTIGVTT LADHGDPVAL Sbjct 361 GELAHELGQAAVDLSTIRRKAAKRLAKEVSAELSALAMADAEFTIGVTTGLADHGDPVAL 420 Query 421 ALASGELARAGADGVDAVEFGFVAHRGMTVLPLAKSASGGELSRVMLSLEVVLATSRKQA 480 ALASGELARAGADGVDAVEFGFVAHRGMTVLPLAKSASGGELSRVMLSLEVVLATSRKQA Sbjct 421 ALASGELARAGADGVDAVEFGFVAHRGMTVLPLAKSASGGELSRVMLSLEVVLATSRKQA 480 Query 481 AGTTMVFDEIDAGVGGWAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLMVQRTGRD 540 AGTTMVFDEIDAGVGGWAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLMVQRTGRD Sbjct 481 AGTTMVFDEIDAGVGGWAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLMVQRTGRD 540 Query 541 GASGVRRLTSEDRVAELARMLAGLGDSDSGRAHARELLETAQNDELT 587 GASGVRRLTSEDRVAELARMLAGLGDSDSGRAHARELLETAQNDELT Sbjct 541 GASGVRRLTSEDRVAELARMLAGLGDSDSGRAHARELLETAQNDELT 587 >gi|240170145|ref|ZP_04748804.1| putative DNA repair protein [Mycobacterium kansasii ATCC 12478] Length=585 Score = 945 bits (2442), Expect = 0.0, Method: Compositional matrix adjust. Identities = 491/586 (84%), Positives = 527/586 (90%), Gaps = 1/586 (0%) Query 1 VLTELRIESLGAISVATAEFDRGFTVLTGETGTGKTMVVTGLHLLGGARADATRVRSGAD 60 +LTE+RIESLGAIS ATAEFDRG TVLTGETGTGKTMVVTGL LLGGARAD TRVRSGAD Sbjct 1 MLTEIRIESLGAISTATAEFDRGLTVLTGETGTGKTMVVTGLQLLGGARADPTRVRSGAD 60 Query 61 RAVVEGRFTTTDLDDATVAGLQAVLDSSGAERDEDGSVIALRSISRDGPSRAYLGGRGVP 120 RAVVEGRFTTTDLDDATVA L +LD+SGA+RDED SVIALRS+S +GPSRAYLGGR VP Sbjct 61 RAVVEGRFTTTDLDDATVARLDEILDASGAQRDEDDSVIALRSVSGNGPSRAYLGGRSVP 120 Query 121 AKSLSGFTNELLTLHGQNDQLRLMRPDEQRGALDRFAAAGEAVQRYRKLRDAWLTARRDL 180 AKSLSGFTNELL LHGQNDQLRL+RPDEQRGA+DRFAA+G A +RYRKLRD WL+ARRDL Sbjct 121 AKSLSGFTNELLALHGQNDQLRLLRPDEQRGAVDRFAASGPACERYRKLRDTWLSARRDL 180 Query 181 VDRRNRARELAQEADRLKFALNEIDTVDPQPGEDVALVADIARLSELDTLREAATTARAT 240 DRRNRARELAQEADRL+FALNEID VDPQPGED ALVADI RLSELDTLREAA+ ARA Sbjct 181 SDRRNRARELAQEADRLQFALNEIDAVDPQPGEDEALVADIVRLSELDTLREAASVARAA 240 Query 241 LCGTPDADAFDRGAVDSLGRARAALQSSDDAALRGLAEQVGEALTVVVDAVAELGAYLDE 300 L G PD D F GA + LGRARAAL+S+DD ALR LA+Q+GEALTV+VDA ELG Y+D Sbjct 241 LSGAPD-DTFGVGATECLGRARAALESTDDTALRALADQIGEALTVIVDAAGELGNYVDG 299 Query 301 LPADASALDAKLARQAQLRTLTRKYAADIDGVLRWADEARARLAQLDVSEEGLAALERRT 360 LPADASALDAKLARQAQLRTLTRKYAADIDGVLRWA +R RL QLDVSEEGLAALERR Sbjct 300 LPADASALDAKLARQAQLRTLTRKYAADIDGVLRWARASRDRLGQLDVSEEGLAALERRA 359 Query 361 GELAHELGQAAVDLSTIRRKAAKRLAKEVSAELSALAMADAEFTIGVTTELADHGDPVAL 420 +L EL QAAVDLS IRRKAAK+LA EV+AELSALAMADAEFTIGVTT+LA+H DPVAL Sbjct 360 EQLERELAQAAVDLSKIRRKAAKKLATEVTAELSALAMADAEFTIGVTTDLAEHDDPVAL 419 Query 421 ALASGELARAGADGVDAVEFGFVAHRGMTVLPLAKSASGGELSRVMLSLEVVLATSRKQA 480 L SGE ARAGADG+D VEFGF AHRGMTVLPLAKSASGGELSRVML+LEVVLATSRKQ Sbjct 420 TLPSGEPARAGADGIDHVEFGFAAHRGMTVLPLAKSASGGELSRVMLALEVVLATSRKQT 479 Query 481 AGTTMVFDEIDAGVGGWAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLMVQRTGRD 540 GTTMVFDE+DAGVGG AAVQIGRRLA+LARTHQVIVVTHLPQVAAYADVHL V TGRD Sbjct 480 VGTTMVFDEVDAGVGGRAAVQIGRRLAKLARTHQVIVVTHLPQVAAYADVHLTVHSTGRD 539 Query 541 GASGVRRLTSEDRVAELARMLAGLGDSDSGRAHARELLETAQNDEL 586 GASGVRRL +E+RVAELARMLAGLG+SDSGRAHARELL+ AQNDE+ Sbjct 540 GASGVRRLNAEERVAELARMLAGLGESDSGRAHARELLDAAQNDEI 585 >gi|289750252|ref|ZP_06509630.1| DNA repair protein recN [Mycobacterium tuberculosis T92] gi|289690839|gb|EFD58268.1| DNA repair protein recN [Mycobacterium tuberculosis T92] Length=464 Score = 894 bits (2309), Expect = 0.0, Method: Compositional matrix adjust. Identities = 463/464 (99%), Positives = 464/464 (100%), Gaps = 0/464 (0%) Query 124 LSGFTNELLTLHGQNDQLRLMRPDEQRGALDRFAAAGEAVQRYRKLRDAWLTARRDLVDR 183 +SGFTNELLTLHGQNDQLRLMRPDEQRGALDRFAAAGEAVQRYRKLRDAWLTARRDLVDR Sbjct 1 MSGFTNELLTLHGQNDQLRLMRPDEQRGALDRFAAAGEAVQRYRKLRDAWLTARRDLVDR 60 Query 184 RNRARELAQEADRLKFALNEIDTVDPQPGEDVALVADIARLSELDTLREAATTARATLCG 243 RNRARELAQEADRLKFALNEIDTVDPQPGEDVALVADIARLSELDTLREAATTARATLCG Sbjct 61 RNRARELAQEADRLKFALNEIDTVDPQPGEDVALVADIARLSELDTLREAATTARATLCG 120 Query 244 TPDADAFDRGAVDSLGRARAALQSSDDAALRGLAEQVGEALTVVVDAVAELGAYLDELPA 303 TPDADAFDRGAVDSLGRARAALQSSDDAALRGLAEQVGEALTVVVDAVAELGAYLDELPA Sbjct 121 TPDADAFDRGAVDSLGRARAALQSSDDAALRGLAEQVGEALTVVVDAVAELGAYLDELPA 180 Query 304 DASALDAKLARQAQLRTLTRKYAADIDGVLRWADEARARLAQLDVSEEGLAALERRTGEL 363 DASALDAKLARQAQLRTLTRKYAADIDGVLRWADEARARLAQLDVSEEGLAALERRTGEL Sbjct 181 DASALDAKLARQAQLRTLTRKYAADIDGVLRWADEARARLAQLDVSEEGLAALERRTGEL 240 Query 364 AHELGQAAVDLSTIRRKAAKRLAKEVSAELSALAMADAEFTIGVTTELADHGDPVALALA 423 AHELGQAAVDLSTIRRKAAKRLAKEVSAELSALAMADAEFTIGVTTELADHGDPVALALA Sbjct 241 AHELGQAAVDLSTIRRKAAKRLAKEVSAELSALAMADAEFTIGVTTELADHGDPVALALA 300 Query 424 SGELARAGADGVDAVEFGFVAHRGMTVLPLAKSASGGELSRVMLSLEVVLATSRKQAAGT 483 SGELARAGADGVDAVEFGFVAHRGMTVLPLAKSASGGELSRVMLSLEVVLATSRKQAAGT Sbjct 301 SGELARAGADGVDAVEFGFVAHRGMTVLPLAKSASGGELSRVMLSLEVVLATSRKQAAGT 360 Query 484 TMVFDEIDAGVGGWAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLMVQRTGRDGAS 543 TMVFDEIDAGVGGWAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLMVQRTGRDGAS Sbjct 361 TMVFDEIDAGVGGWAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLMVQRTGRDGAS 420 Query 544 GVRRLTSEDRVAELARMLAGLGDSDSGRAHARELLETAQNDELT 587 GVRRLTSEDRVAELARMLAGLGDSDSGRAHARELLETAQNDELT Sbjct 421 GVRRLTSEDRVAELARMLAGLGDSDSGRAHARELLETAQNDELT 464 >gi|118617313|ref|YP_905645.1| DNA repair protein, RecN [Mycobacterium ulcerans Agy99] gi|118569423|gb|ABL04174.1| DNA repair protein, RecN [Mycobacterium ulcerans Agy99] Length=581 Score = 849 bits (2193), Expect = 0.0, Method: Compositional matrix adjust. Identities = 468/585 (80%), Positives = 511/585 (88%), Gaps = 5/585 (0%) Query 1 VLTELRIESLGAISVATAEFDRGFTVLTGETGTGKTMVVTGLHLLGGARADATRVRSGAD 60 +LTE+RIESLGAIS ATAEFDRG TVLTGETGTGKTMVVTGLHLLGGARADA RVRSGAD Sbjct 1 MLTEIRIESLGAISAATAEFDRGLTVLTGETGTGKTMVVTGLHLLGGARADANRVRSGAD 60 Query 61 RAVVEGRFTTTDLDDATVAGLQAVLDSSGAERDEDGSVIALRSISRDGPSRAYLGGRGVP 120 RA+VEGRFTT DLD + A L +LD+SGA+RDEDGSVIALRS+S GPSRAYLGGR VP Sbjct 61 RAIVEGRFTTVDLDQSATAHLDHMLDASGADRDEDGSVIALRSVSSSGPSRAYLGGRSVP 120 Query 121 AKSLSGFTNELLTLHGQNDQLRLMRPDEQRGALDRFAAAGEAVQRYRKLRDAWLTARRDL 180 AKSLS FTNELL LHGQNDQLRLMRP+EQRGALDRFA + A+QRYRKLRD WL+ARRDL Sbjct 121 AKSLSNFTNELLALHGQNDQLRLMRPEEQRGALDRFATSASALQRYRKLRDTWLSARRDL 180 Query 181 VDRRNRARELAQEADRLKFALNEIDTVDPQPGEDVALVADIARLSELDTLREAATTARAT 240 +DRRNRARELAQEADRL+FAL+EIDTVDPQPGED ALVADIARLSELDTLREAA+ ARA Sbjct 181 LDRRNRARELAQEADRLQFALDEIDTVDPQPGEDDALVADIARLSELDTLREAASAARAA 240 Query 241 LCGTPDADAFDRGAVDSLGRARAALQSSDDAALRGLAEQVGEALTVVVDAVAELGAYLDE 300 L G + +AF GA + LGRARAAL+SSDDA L+ LA+QV +AL VV DA ELG+Y+D Sbjct 241 LSGASE-EAFGTGAAECLGRARAALESSDDATLQALAKQVSDALAVVSDAAGELGSYVDA 299 Query 301 LPADASALDAKLARQAQLRTLTRKYAADIDGVLRWADEARARLAQLDVSEEGLAALERRT 360 LPADASALD KLARQAQLRTLTRKYAADIDGVL WA ++RARLA LDVSEEGLAAL+RR Sbjct 300 LPADASALDTKLARQAQLRTLTRKYAADIDGVLAWAQDSRARLAALDVSEEGLAALQRRA 359 Query 361 GELAHELGQAAVDLSTIRRKAAKRLAKEVSAELSALAMADAEFTIGVTTELADHGDPVAL 420 GEL HE+ QAA +LS R KAAKRLAKEV+AELSALAMADAEFTI V E+AD D AL Sbjct 360 GELEHEVAQAAAELSKTRAKAAKRLAKEVTAELSALAMADAEFTIVVGVEVADEDDAAAL 419 Query 421 ALASGELARAGADGVDAVEFGFVAHRGMTVLPLAKSASGGELSRVMLSLEVVLATSRKQA 480 L +GE RAG DGVD VEFGF AHRGMTVLPLAKSASGGELSRVML+LEVVLA S A Sbjct 420 TLPTGERVRAGGDGVDLVEFGFAAHRGMTVLPLAKSASGGELSRVMLALEVVLAAS---A 476 Query 481 AGTTMVFDEIDAGVGGWAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLMVQRTGRD 540 AGTTMVFDE+DAGVGGWAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLMV T + Sbjct 477 AGTTMVFDEVDAGVGGWAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLMVHGT-KG 535 Query 541 GASGVRRLTSEDRVAELARMLAGLGDSDSGRAHARELLETAQNDE 585 GAS VRRL+ ++RV ELARMLAGLG+SDSGRAHARELL+TA+ND+ Sbjct 536 GASEVRRLSDDERVGELARMLAGLGESDSGRAHARELLDTARNDK 580 >gi|183982516|ref|YP_001850807.1| DNA repair protein, RecN [Mycobacterium marinum M] gi|183175842|gb|ACC40952.1| DNA repair protein, RecN [Mycobacterium marinum M] Length=581 Score = 848 bits (2191), Expect = 0.0, Method: Compositional matrix adjust. Identities = 467/585 (80%), Positives = 511/585 (88%), Gaps = 5/585 (0%) Query 1 VLTELRIESLGAISVATAEFDRGFTVLTGETGTGKTMVVTGLHLLGGARADATRVRSGAD 60 +LTE+RIESLGAIS ATAEFDRG TVLTGETGTGKTMVVTGLHLLGGARADA RVRSGAD Sbjct 1 MLTEIRIESLGAISAATAEFDRGLTVLTGETGTGKTMVVTGLHLLGGARADANRVRSGAD 60 Query 61 RAVVEGRFTTTDLDDATVAGLQAVLDSSGAERDEDGSVIALRSISRDGPSRAYLGGRGVP 120 RA+VEGRFTT DLD + A L +LD+SGA+RDEDGSVIALRS+S GPSRAYLGGR VP Sbjct 61 RAIVEGRFTTVDLDQSATAHLDHMLDASGADRDEDGSVIALRSVSSSGPSRAYLGGRSVP 120 Query 121 AKSLSGFTNELLTLHGQNDQLRLMRPDEQRGALDRFAAAGEAVQRYRKLRDAWLTARRDL 180 AKSLS FTNELL LHGQNDQLRLMRP+EQRGALDRFA + A+QRYRKLRD WL+ARRDL Sbjct 121 AKSLSNFTNELLALHGQNDQLRLMRPEEQRGALDRFATSASALQRYRKLRDTWLSARRDL 180 Query 181 VDRRNRARELAQEADRLKFALNEIDTVDPQPGEDVALVADIARLSELDTLREAATTARAT 240 +DRRNRARELAQEADRL+FAL+EIDTVDPQPGED ALVADIARLSELDTLREAA+ ARA Sbjct 181 LDRRNRARELAQEADRLQFALDEIDTVDPQPGEDDALVADIARLSELDTLREAASAARAA 240 Query 241 LCGTPDADAFDRGAVDSLGRARAALQSSDDAALRGLAEQVGEALTVVVDAVAELGAYLDE 300 L G + +AF GA + LGRARAAL+SSDDA L+ LA+QV +AL VV DA ELG+Y+D Sbjct 241 LSGASE-EAFGTGAAECLGRARAALESSDDATLQALAKQVSDALAVVSDAAGELGSYVDA 299 Query 301 LPADASALDAKLARQAQLRTLTRKYAADIDGVLRWADEARARLAQLDVSEEGLAALERRT 360 LPADASALD KLARQAQLRTLTRKYAADIDGVL WA ++RARLA LDVSEEGLAAL+RR Sbjct 300 LPADASALDTKLARQAQLRTLTRKYAADIDGVLAWAQDSRARLAALDVSEEGLAALQRRA 359 Query 361 GELAHELGQAAVDLSTIRRKAAKRLAKEVSAELSALAMADAEFTIGVTTELADHGDPVAL 420 GEL HE+ QAA +LS R +AAKRLAKEV+AELSALAMADAEFTI V E+AD D AL Sbjct 360 GELEHEVAQAAAELSKTRARAAKRLAKEVTAELSALAMADAEFTIAVGVEVADEDDAAAL 419 Query 421 ALASGELARAGADGVDAVEFGFVAHRGMTVLPLAKSASGGELSRVMLSLEVVLATSRKQA 480 L +GE RAG DGVD VEFGF AHRGMTVLPLAKSASGGELSRVML+LEVVLA S A Sbjct 420 TLPTGERVRAGGDGVDLVEFGFAAHRGMTVLPLAKSASGGELSRVMLALEVVLAAS---A 476 Query 481 AGTTMVFDEIDAGVGGWAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLMVQRTGRD 540 AGTTMVFDE+DAGVGGWAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLMV T + Sbjct 477 AGTTMVFDEVDAGVGGWAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLMVHGT-KG 535 Query 541 GASGVRRLTSEDRVAELARMLAGLGDSDSGRAHARELLETAQNDE 585 GAS VRRL+ ++RV ELARMLAGLG+SDSGRAHARELL+TA+ND+ Sbjct 536 GASEVRRLSDDERVGELARMLAGLGESDSGRAHARELLDTARNDK 580 >gi|15827707|ref|NP_301970.1| recombination and DNA repair [Mycobacterium leprae TN] gi|221230184|ref|YP_002503600.1| recombination and DNA repair [Mycobacterium leprae Br4923] gi|12643771|sp|Q49896.1|RECN_MYCLE RecName: Full=DNA repair protein recN; AltName: Full=Recombination protein N gi|467150|gb|AAA50914.1| recN [Mycobacterium leprae] gi|2065223|emb|CAB08275.1| RecN [Mycobacterium leprae] gi|13093258|emb|CAC31741.1| recombination and DNA repair [Mycobacterium leprae] gi|219933291|emb|CAR71455.1| recombination and DNA repair [Mycobacterium leprae Br4923] Length=587 Score = 848 bits (2190), Expect = 0.0, Method: Compositional matrix adjust. Identities = 448/589 (77%), Positives = 496/589 (85%), Gaps = 7/589 (1%) Query 1 VLTELRIESLGAISVATAEFDRGFTVLTGETGTGKTMVVTGLHLLGGARADATRVRSGAD 60 +LTE+RIESLGAISVATAEFDRG TVLTGETGTGKTMVVTGLHLLGGARADA+RVRSGA+ Sbjct 1 MLTEIRIESLGAISVATAEFDRGLTVLTGETGTGKTMVVTGLHLLGGARADASRVRSGAN 60 Query 61 RAVVEGRFTTTDLDDATVAGLQAVLDSSGAERDEDGSVIALRSISRDGPSRAYLGGRGVP 120 RAVVEGRFTTTDLDD VA L +L++SG+ERDEDGSVI LRS+SRDGPSR+YLGGR VP Sbjct 61 RAVVEGRFTTTDLDDVVVAQLDGILNASGSERDEDGSVIVLRSVSRDGPSRSYLGGRSVP 120 Query 121 AKSLSGFTNELLTLHGQNDQLRLMRPDEQRGALDRFAAAGEAVQRYRKLRDAWLTARRDL 180 AKSL FT ELL LHGQNDQLRL+RP+EQR ALDR+AAAG + +RYR+LRDAWL AR DL Sbjct 121 AKSLGSFTTELLALHGQNDQLRLVRPEEQRAALDRYAAAGPSCERYRELRDAWLLARSDL 180 Query 181 VDRRNRARELAQEADRLKFALNEIDTVDPQPGEDVALVADIARLSELDTLREAATTARAT 240 +DRRNR REL QEADRLKFAL+EID+VDPQPGED ALVADI RLSELD LRE A ARA Sbjct 181 IDRRNRIRELVQEADRLKFALSEIDSVDPQPGEDNALVADIVRLSELDMLREVAVNARAA 240 Query 241 LCGT-PDADAFDRGAVDSLGRARAALQSSDDAALRGLAEQVGEALTVVVDAVAELGAYLD 299 L G D D AV +G+A+AAL+S+DDA LR A+QVGE LTVVV+ ELG YL+ Sbjct 241 LSGALDDMDVSGSNAVACMGQAKAALESTDDATLRAFADQVGEVLTVVVEVGRELGEYLE 300 Query 300 ELPADASALDAKLARQAQLRTLTRKYAADIDGVLRWADEARARLAQLDVSEEGLAALERR 359 ELP DASAL++KL RQA+L TLTRKYAADIDGVL+WA E+R RL QLDVS E LA +E R Sbjct 301 ELPVDASALESKLVRQAELCTLTRKYAADIDGVLQWARESRERLEQLDVSYERLAGVESR 360 Query 360 TGELAHELGQAAVDLSTIRRKAAKRLAKEVSAELSALAMADAEFTIGVTTE---LADHGD 416 EL +L QAAVDLS +RR AA RLAKEV+AELSALAM DAEFTI VTT+ L D+ Sbjct 361 VDELERQLSQAAVDLSKLRRDAANRLAKEVTAELSALAMVDAEFTISVTTDLIPLTDYKR 420 Query 417 PVALALASGELARAGADGVDAVEFGFVAHRGMTVLPLAKSASGGELSRVMLSLEVVLATS 476 A+ L SG +ARAGADGVD VEFGF AHRGMTVLPLAKSASGGELSRVML+LEVVLATS Sbjct 421 SAAVTLPSGGVARAGADGVDQVEFGFAAHRGMTVLPLAKSASGGELSRVMLALEVVLATS 480 Query 477 RKQAAGTTMVFDEIDAGVGGWAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLMVQR 536 AAGTTMVFDE+D GVGG AAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHL+V Sbjct 481 ---AAGTTMVFDEVDVGVGGRAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLVVHS 537 Query 537 TGRDGASGVRRLTSEDRVAELARMLAGLGDSDSGRAHARELLETAQNDE 585 G DGAS VRRL +DRVAELARMLAGLG+SDSGRAHARELL+ A+ D+ Sbjct 538 AGLDGASDVRRLAGDDRVAELARMLAGLGESDSGRAHARELLDAARKDK 586 >gi|296164596|ref|ZP_06847163.1| DNA repair protein RecN [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295900015|gb|EFG79454.1| DNA repair protein RecN [Mycobacterium parascrofulaceum ATCC BAA-614] Length=584 Score = 847 bits (2188), Expect = 0.0, Method: Compositional matrix adjust. Identities = 471/587 (81%), Positives = 504/587 (86%), Gaps = 4/587 (0%) Query 1 VLTELRIESLGAISVATAEFDRGFTVLTGETGTGKTMVVTGLHLLGGARADATRVRSGAD 60 +LTE+RIESLGAIS A EFDRG TVLTGETGTGKTMVVTGLHLLGGARADATRVRSGAD Sbjct 1 MLTEIRIESLGAISAAVGEFDRGLTVLTGETGTGKTMVVTGLHLLGGARADATRVRSGAD 60 Query 61 RAVVEGRFTTTDLDDATVAGLQAVLDSSGAERDEDGSVIALRSISRDGPSRAYLGGRGVP 120 RAVVEGRFTTTDLDDA VA L +LD+SGAERDEDGSVIALRS+SRDGPSRAYLGGR VP Sbjct 61 RAVVEGRFTTTDLDDAAVAQLDGMLDASGAERDEDGSVIALRSVSRDGPSRAYLGGRSVP 120 Query 121 AKSLSGFTNELLTLHGQNDQLRLMRPDEQRGALDRFAAAGEAVQRYRKLRDAWLTARRDL 180 AKSL FT ELLTLHGQNDQLRLMRP+EQRGALDRFA A A++RYRKLRDAWLTAR DL Sbjct 121 AKSLGDFTTELLTLHGQNDQLRLMRPEEQRGALDRFAKAAPALERYRKLRDAWLTARHDL 180 Query 181 VDRRNRARELAQEADRLKFALNEIDTVDPQPGEDVALVADIARLSELDTLREAATTARAT 240 DRRNR RELA E+DRL FALNEIDTVDPQPGED ALVADI RLSELDTLREAA TA A Sbjct 181 SDRRNRMRELALESDRLTFALNEIDTVDPQPGEDDALVADIVRLSELDTLREAAFTAHAA 240 Query 241 LCGTP-DADAFDRGAVDSLGRARAALQSSDDAALRGLAEQVGEALTVVVDAVAELGAYLD 299 L G P DADA A DSLGRARAAL+S+DD LR LA QVGEALTVV DA EL +LD Sbjct 241 LSGAPDDADASAHSAADSLGRARAALESTDDPKLRALAGQVGEALTVVADAAGELTGFLD 300 Query 300 ELPADASALDAKLARQAQLRTLTRKYAADIDGVLRWADEARARLAQLDVSEEGLAALERR 359 ELP DASAL+AKLARQA+LRTLTRKYAAD+DGVL+WA E+R RLAQLDVSEEGL AL R Sbjct 301 ELPVDASALEAKLARQAELRTLTRKYAADVDGVLQWARESRDRLAQLDVSEEGLTALAAR 360 Query 360 TGELAHELGQAAVDLSTIRRKAAKRLAKEVSAELSALAMADAEFTIGVTTELADHGDPVA 419 ELA EL QAA DLS IRRKAAKRLAKEV+AELS LAMADA+F I V+ + AD DP A Sbjct 361 VDELARELAQAAADLSGIRRKAAKRLAKEVTAELSGLAMADAQFGIDVSIDAADQDDPAA 420 Query 420 LALASGELARAGADGVDAVEFGFVAHRGMTVLPLAKSASGGELSRVMLSLEVVLATSRKQ 479 LAL +GE ARAGADGVD VEFGF AHRGM LPLAKSASGGELSRVML+LEVVL+ S Sbjct 421 LALPTGERARAGADGVDQVEFGFAAHRGMDQLPLAKSASGGELSRVMLALEVVLSAS--- 477 Query 480 AAGTTMVFDEIDAGVGGWAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLMVQRTGR 539 AAGTTMVFDE+DAGVGG AAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHL+V G Sbjct 478 AAGTTMVFDEVDAGVGGRAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLVVHSAGP 537 Query 540 DGASGVRRLTSEDRVAELARMLAGLGDSDSGRAHARELLETAQNDEL 586 G S VRR+T ++RVAELARM+AGLG+SDSGRAHARELL+ AQ DE+ Sbjct 538 KGTSVVRRVTGDERVAELARMMAGLGESDSGRAHARELLDAAQRDEI 584 >gi|118466477|ref|YP_882259.1| DNA repair protein RecN [Mycobacterium avium 104] gi|118167764|gb|ABK68661.1| DNA repair protein RecN [Mycobacterium avium 104] Length=589 Score = 826 bits (2134), Expect = 0.0, Method: Compositional matrix adjust. Identities = 450/590 (77%), Positives = 493/590 (84%), Gaps = 5/590 (0%) Query 1 VLTELRIESLGAISVATAEFDRGFTVLTGETGTGKTMVVTGLHLLGGARADATRVRSGAD 60 +LTE+RIESLGAIS A EFDRG TVLTGETGTGKTMVVTGLHLLGGARADATRVRSGAD Sbjct 1 MLTEIRIESLGAISAAVGEFDRGLTVLTGETGTGKTMVVTGLHLLGGARADATRVRSGAD 60 Query 61 RAVVEGRFTTTDLDDATVAGLQAVLDSSGAERDEDGSVIALRSISRDGPSRAYLGGRGVP 120 RA+VEGRFTTTDLD+A V L +LD+SGAERDEDGSVIALRS++RDGPSRAYLGGR VP Sbjct 61 RAIVEGRFTTTDLDEALVVRLDEMLDASGAERDEDGSVIALRSVNRDGPSRAYLGGRSVP 120 Query 121 AKSLSGFTNELLTLHGQNDQLRLMRPDEQRGALDRFAAAGEAVQRYRKLRDAWLTARRDL 180 AKSL FT ELLTLHGQNDQLRLMRP+EQ GALDRFA AG A++RY KLRDAWL+ARRDL Sbjct 121 AKSLGDFTAELLTLHGQNDQLRLMRPEEQCGALDRFAKAGPALERYTKLRDAWLSARRDL 180 Query 181 VDRRNRARELAQEADRLKFALNEIDTVDPQPGEDVALVADIARLSELDTLREAATTARAT 240 DRRNR RELA EADRL FAL EID VDPQPGED ALVA+I RLSELDTLREAA ARA Sbjct 181 ADRRNRMRELALEADRLTFALGEIDAVDPQPGEDDALVAEIMRLSELDTLREAAAAARAA 240 Query 241 LCGTPDADAFDRGAVDSLGRARAALQSSDDAALRGLAEQVGEALTVVVDAVAELGAYLDE 300 L + AVD+LG+ARAAL+S+DD L LA Q+GE LTVVVDA EL +L+E Sbjct 241 LSADDADGS-GLSAVDTLGKARAALESTDDPKLLALAGQIGEVLTVVVDAAGELAGFLEE 299 Query 301 LPADASALDAKLARQAQLRTLTRKYAADIDGVLRWADEARARLAQLDVSEEGLAALERRT 360 LP DASAL+AKLARQ++LR LTRKYAADIDGVL WA E+R RLAQLDVSEEGL+AL R Sbjct 300 LPVDASALEAKLARQSELRGLTRKYAADIDGVLAWARESRERLAQLDVSEEGLSALAARV 359 Query 361 GELAHELGQAAVDLSTIRRKAAKRLAKEVSAELSALAMADAEFTIGVTTELADHG----D 416 EL EL AA DLSTIRRKAAKRLAKEV+AELS LAMADA+F+I V+T++ G D Sbjct 360 EELGRELAGAAADLSTIRRKAAKRLAKEVTAELSGLAMADAQFSIDVSTDVVPAGSGSDD 419 Query 417 PVALALASGELARAGADGVDAVEFGFVAHRGMTVLPLAKSASGGELSRVMLSLEVVLATS 476 L L SGE RAGADG+D VEFGF AHRGM LPLAKSASGGELSRVML+LEVVLA S Sbjct 420 AAVLTLPSGERVRAGADGIDQVEFGFAAHRGMDRLPLAKSASGGELSRVMLALEVVLAAS 479 Query 477 RKQAAGTTMVFDEIDAGVGGWAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLMVQR 536 RK+ GTTMVFDE+DAGVGG AAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHL+V Sbjct 480 RKETVGTTMVFDEVDAGVGGRAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLVVHG 539 Query 537 TGRDGASGVRRLTSEDRVAELARMLAGLGDSDSGRAHARELLETAQNDEL 586 G G S VRR+T ++RVAELARMLAGLG+SDSGRAHARELL+ AQ DE+ Sbjct 540 AGPRGTSVVRRVTGDERVAELARMLAGLGESDSGRAHARELLDAAQKDEI 589 >gi|41407501|ref|NP_960337.1| hypothetical protein MAP1403 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395854|gb|AAS03720.1| RecN [Mycobacterium avium subsp. paratuberculosis K-10] gi|336457855|gb|EGO36849.1| DNA repair protein RecN [Mycobacterium avium subsp. paratuberculosis S397] Length=589 Score = 824 bits (2129), Expect = 0.0, Method: Compositional matrix adjust. Identities = 449/590 (77%), Positives = 492/590 (84%), Gaps = 5/590 (0%) Query 1 VLTELRIESLGAISVATAEFDRGFTVLTGETGTGKTMVVTGLHLLGGARADATRVRSGAD 60 +LTE+RIESLGAIS A EFDRG TVLTGETGTGKTMVVTGLHLLGGARADATRVRSGAD Sbjct 1 MLTEIRIESLGAISAAVGEFDRGLTVLTGETGTGKTMVVTGLHLLGGARADATRVRSGAD 60 Query 61 RAVVEGRFTTTDLDDATVAGLQAVLDSSGAERDEDGSVIALRSISRDGPSRAYLGGRGVP 120 RA+VEGRFTTTDLD+ V L +LD+SGAERDEDGSVIALRS++RDGPSRAYLGGR VP Sbjct 61 RAIVEGRFTTTDLDETLVVRLDEMLDASGAERDEDGSVIALRSVNRDGPSRAYLGGRSVP 120 Query 121 AKSLSGFTNELLTLHGQNDQLRLMRPDEQRGALDRFAAAGEAVQRYRKLRDAWLTARRDL 180 AKSL FT ELLTLHGQNDQLRLMRP+EQ GALDRFA AG A++RY KLRDAWL+ARRDL Sbjct 121 AKSLGDFTAELLTLHGQNDQLRLMRPEEQCGALDRFAKAGPALERYTKLRDAWLSARRDL 180 Query 181 VDRRNRARELAQEADRLKFALNEIDTVDPQPGEDVALVADIARLSELDTLREAATTARAT 240 DRRNR RELA EADRL FAL EID VDPQPGED ALVA+I RLSELDTLREAA ARA Sbjct 181 ADRRNRMRELALEADRLTFALGEIDAVDPQPGEDDALVAEIMRLSELDTLREAAAAARAA 240 Query 241 LCGTPDADAFDRGAVDSLGRARAALQSSDDAALRGLAEQVGEALTVVVDAVAELGAYLDE 300 L + AVD+LG+ARAAL+S+DD L LA Q+GE LTVVVDA EL +L+E Sbjct 241 LSADDADGS-GLSAVDTLGKARAALESTDDPKLLALAGQIGEVLTVVVDAAGELAGFLEE 299 Query 301 LPADASALDAKLARQAQLRTLTRKYAADIDGVLRWADEARARLAQLDVSEEGLAALERRT 360 LP DASAL+AKLARQ++LR LTRKYAADIDGVL WA E+R RLAQLDVSEEGL+AL R Sbjct 300 LPVDASALEAKLARQSELRGLTRKYAADIDGVLAWARESRERLAQLDVSEEGLSALAARV 359 Query 361 GELAHELGQAAVDLSTIRRKAAKRLAKEVSAELSALAMADAEFTIGVTTELADHG----D 416 EL EL AA DLSTIRRKAAKRLAKEV+AELS LAMADA+F+I V+T++ G D Sbjct 360 EELGRELAGAAADLSTIRRKAAKRLAKEVTAELSGLAMADAQFSIDVSTDVVPAGSGSDD 419 Query 417 PVALALASGELARAGADGVDAVEFGFVAHRGMTVLPLAKSASGGELSRVMLSLEVVLATS 476 L L SGE RAGADG+D VEFGF AHRGM LPLAKSASGGELSRVML+LEVVLA S Sbjct 420 AAVLTLPSGERVRAGADGIDQVEFGFAAHRGMDRLPLAKSASGGELSRVMLALEVVLAAS 479 Query 477 RKQAAGTTMVFDEIDAGVGGWAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLMVQR 536 RK+ GTTMVFDE+DAGVGG AAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHL+V Sbjct 480 RKETVGTTMVFDEVDAGVGGRAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLVVHG 539 Query 537 TGRDGASGVRRLTSEDRVAELARMLAGLGDSDSGRAHARELLETAQNDEL 586 G G S VRR+T ++RVAELARMLAGLG+SDSGRAHARELL+ AQ DE+ Sbjct 540 AGPRGTSVVRRVTGDERVAELARMLAGLGESDSGRAHARELLDAAQKDEI 589 >gi|254775527|ref|ZP_05217043.1| DNA repair protein RecN [Mycobacterium avium subsp. avium ATCC 25291] Length=589 Score = 821 bits (2120), Expect = 0.0, Method: Compositional matrix adjust. Identities = 447/590 (76%), Positives = 492/590 (84%), Gaps = 5/590 (0%) Query 1 VLTELRIESLGAISVATAEFDRGFTVLTGETGTGKTMVVTGLHLLGGARADATRVRSGAD 60 +LTE+RIESLGAIS A EFDRG TVLTGETGTGKTMVVTGLHLLGGARADATRVRSGA+ Sbjct 1 MLTEIRIESLGAISAAVGEFDRGLTVLTGETGTGKTMVVTGLHLLGGARADATRVRSGAN 60 Query 61 RAVVEGRFTTTDLDDATVAGLQAVLDSSGAERDEDGSVIALRSISRDGPSRAYLGGRGVP 120 RA+VEGRFTTTDLD+A V L +LD+SGAERDEDGSVIALRS++RDGPSRAYLGGR VP Sbjct 61 RAIVEGRFTTTDLDEALVVRLDEMLDASGAERDEDGSVIALRSVNRDGPSRAYLGGRSVP 120 Query 121 AKSLSGFTNELLTLHGQNDQLRLMRPDEQRGALDRFAAAGEAVQRYRKLRDAWLTARRDL 180 AKSL FT ELLTLHGQNDQLRLMRP+EQ GALDRFA AG A++RY KLRDAWL+ARRDL Sbjct 121 AKSLGDFTAELLTLHGQNDQLRLMRPEEQCGALDRFAKAGPALERYTKLRDAWLSARRDL 180 Query 181 VDRRNRARELAQEADRLKFALNEIDTVDPQPGEDVALVADIARLSELDTLREAATTARAT 240 DRRNR RELA EADRL FAL EID V PQPGED ALVA+I RLSELDTLREAA ARA Sbjct 181 ADRRNRMRELALEADRLTFALGEIDAVGPQPGEDDALVAEIMRLSELDTLREAAAAARAA 240 Query 241 LCGTPDADAFDRGAVDSLGRARAALQSSDDAALRGLAEQVGEALTVVVDAVAELGAYLDE 300 L + AVD+LG+ARAAL+S+DD L LA Q+GE LTVVVDA EL +L+E Sbjct 241 LSADDADGS-GLSAVDTLGKARAALESTDDPKLLALAGQIGEVLTVVVDAAGELAGFLEE 299 Query 301 LPADASALDAKLARQAQLRTLTRKYAADIDGVLRWADEARARLAQLDVSEEGLAALERRT 360 LP DASAL+AKLARQ++LR LTRKYAADIDGVL WA E+R RLAQLDVSEEGL+AL R Sbjct 300 LPVDASALEAKLARQSELRGLTRKYAADIDGVLAWARESRERLAQLDVSEEGLSALAARV 359 Query 361 GELAHELGQAAVDLSTIRRKAAKRLAKEVSAELSALAMADAEFTIGVTTELADHG----D 416 EL EL AA DLSTIRRKAAKRLAKEV+AELS LAMADA+F+I V+T++ G D Sbjct 360 EELGRELAGAAADLSTIRRKAAKRLAKEVTAELSGLAMADAQFSIDVSTDVVPAGSGSDD 419 Query 417 PVALALASGELARAGADGVDAVEFGFVAHRGMTVLPLAKSASGGELSRVMLSLEVVLATS 476 L L SGE RAGADG+D VEFGF AHRGM LPLAKSASGGELSRVML+LEVVLA S Sbjct 420 AAVLTLPSGERVRAGADGIDQVEFGFAAHRGMDRLPLAKSASGGELSRVMLALEVVLAAS 479 Query 477 RKQAAGTTMVFDEIDAGVGGWAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLMVQR 536 RK+ GTTMVFDE+DAGVGG AAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHL+V Sbjct 480 RKETVGTTMVFDEVDAGVGGRAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLVVHG 539 Query 537 TGRDGASGVRRLTSEDRVAELARMLAGLGDSDSGRAHARELLETAQNDEL 586 G G S VRR+T ++RVAELARMLAGLG+SDSGRAHARELL+ AQ +E+ Sbjct 540 AGPRGTSVVRRVTGDERVAELARMLAGLGESDSGRAHARELLDAAQKEEI 589 >gi|254821090|ref|ZP_05226091.1| DNA repair protein RecN [Mycobacterium intracellulare ATCC 13950] Length=588 Score = 817 bits (2110), Expect = 0.0, Method: Compositional matrix adjust. Identities = 459/591 (78%), Positives = 499/591 (85%), Gaps = 8/591 (1%) Query 1 VLTELRIESLGAISVATAEFDRGFTVLTGETGTGKTMVVTGLHLLGGARADATRVRSGAD 60 +LTE+RIESLGAIS A EFDRG TVLTGETGTGKTMVVTGLHLLGGARADATRVRSGA+ Sbjct 1 MLTEIRIESLGAISSAVGEFDRGLTVLTGETGTGKTMVVTGLHLLGGARADATRVRSGAE 60 Query 61 RAVVEGRFTTTDLDDATVAGLQAVLDSSGAERDEDGSVIALRSISRDGPSRAYLGGRGVP 120 RAVVEGRF+TTDLD+A V L +LD+SGAERDEDGSVIALRS+SRDGPSRAYLGGR VP Sbjct 61 RAVVEGRFSTTDLDEAMVVRLDEMLDASGAERDEDGSVIALRSVSRDGPSRAYLGGRSVP 120 Query 121 AKSLSGFTNELLTLHGQNDQLRLMRPDEQRGALDRFAAAGEAVQRYRKLRDAWLTARRDL 180 AKSL FT LLTLHGQNDQLRL+RP+EQ ALDRFA AG A++RY KLRDAWL+ARRDL Sbjct 121 AKSLGDFTAGLLTLHGQNDQLRLIRPEEQCAALDRFAKAGPALERYCKLRDAWLSARRDL 180 Query 181 VDRRNRARELAQEADRLKFALNEIDTVDPQPGEDVALVADIARLSELDTLREAATTARAT 240 +DRRNR RELA EADRL FALNEID VDPQPGED ALVA+I RLSELDTLREAA TARA Sbjct 181 LDRRNRMRELALEADRLTFALNEIDAVDPQPGEDDALVAEIVRLSELDTLREAAATARAA 240 Query 241 LCGTPDADAFDRGAVDSLGRARAALQSSDDAALRGLAEQVGEALTVVVDAVAELGAYLDE 300 L + + D A DSLG+ARAAL+S+ DA L LA Q+GE LTV+VDA ELG +L+E Sbjct 241 LS-SEETDGLS--ATDSLGKARAALESTGDAKLTALAGQIGEVLTVLVDAAGELGGFLEE 297 Query 301 LPADASALDAKLARQAQLRTLTRKYAADIDGVLRWADEARARLAQLDVSEEGLAALERRT 360 LP DASAL++KLARQA+LRTLTRKYAADIDGV+ WA E+R RLAQLDVSEEGLAAL R Sbjct 298 LPVDASALESKLARQAELRTLTRKYAADIDGVIGWAQESRQRLAQLDVSEEGLAALAARV 357 Query 361 GELAHELGQAAVDLSTIRRKAAKRLAKEVSAELSALAMADAEFTIGVTTELA-----DHG 415 EL EL QAAVDLS RRKAAKRLAKEV+AELS LAMADA+FTI VT + A D Sbjct 358 DELGRELAQAAVDLSATRRKAAKRLAKEVTAELSGLAMADAQFTIDVTLDAAPETASDPE 417 Query 416 DPVALALASGELARAGADGVDAVEFGFVAHRGMTVLPLAKSASGGELSRVMLSLEVVLAT 475 D AL L SGEL AGADGVD VEFGF AHRGM LPLAKSASGGELSRVML+LEVVLAT Sbjct 418 DSAALRLPSGELVHAGADGVDQVEFGFAAHRGMDQLPLAKSASGGELSRVMLALEVVLAT 477 Query 476 SRKQAAGTTMVFDEIDAGVGGWAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLMVQ 535 SRK+AAGTTMVFDE+DAGVGG AAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHL+V Sbjct 478 SRKEAAGTTMVFDEVDAGVGGRAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLVVH 537 Query 536 RTGRDGASGVRRLTSEDRVAELARMLAGLGDSDSGRAHARELLETAQNDEL 586 G G S VRRL ++RVAELARMLAGLG+SDSGRAHARELLE AQ DE+ Sbjct 538 AAGPKGTSVVRRLGGDERVAELARMLAGLGESDSGRAHARELLEAAQKDEI 588 >gi|342860726|ref|ZP_08717376.1| DNA repair protein RecN [Mycobacterium colombiense CECT 3035] gi|342131750|gb|EGT85007.1| DNA repair protein RecN [Mycobacterium colombiense CECT 3035] Length=590 Score = 799 bits (2064), Expect = 0.0, Method: Compositional matrix adjust. Identities = 449/591 (76%), Positives = 496/591 (84%), Gaps = 6/591 (1%) Query 1 VLTELRIESLGAISVATAEFDRGFTVLTGETGTGKTMVVTGLHLLGGARADATRVRSGAD 60 +LTE+RIESLGAIS A EFDRG TVLTGETGTGKTMVVTGLHLLGGARADATRVRSGAD Sbjct 1 MLTEIRIESLGAISAAVGEFDRGLTVLTGETGTGKTMVVTGLHLLGGARADATRVRSGAD 60 Query 61 RAVVEGRFTTTDLDDATVAGLQAVLDSSGAERDEDGSVIALRSISRDGPSRAYLGGRGVP 120 RA+VEGRFTTTDLD++ + L +LD+SGAERDEDGSVIALRS+SR+GPSRAYLGGR VP Sbjct 61 RAIVEGRFTTTDLDESLIVKLDEMLDASGAERDEDGSVIALRSVSREGPSRAYLGGRSVP 120 Query 121 AKSLSGFTNELLTLHGQNDQLRLMRPDEQRGALDRFAAAGEAVQRYRKLRDAWLTARRDL 180 AKSL FT LLTLHGQNDQLRLMRP+EQ GALDRFA AG A++RY KLRDAWL+ARRDL Sbjct 121 AKSLGDFTAGLLTLHGQNDQLRLMRPEEQCGALDRFAKAGPALERYCKLRDAWLSARRDL 180 Query 181 VDRRNRARELAQEADRLKFALNEIDTVDPQPGEDVALVADIARLSELDTLREAATTARAT 240 +DRRNR RELA EADRL FAL EID VDPQPGED ALVA+I RLSELDTLREAA TARA Sbjct 181 LDRRNRMRELALEADRLNFALTEIDAVDPQPGEDDALVAEILRLSELDTLREAAATARAA 240 Query 241 LCGTPDADAFDRGAVDSLGRARAALQSSDDAALRGLAEQVGEALTVVVDAVAELGAYLDE 300 L + +AD A DSLG+ARAAL+S+DDA L L Q+GE LTVVVDA EL +LDE Sbjct 241 LS-SDEADGSGFSATDSLGKARAALESTDDAKLLALGGQLGEVLTVVVDAAGELAGFLDE 299 Query 301 LPADASALDAKLARQAQLRTLTRKYAADIDGVLRWADEARARLAQLDVSEEGLAALERRT 360 LP DASAL+++LARQA+LRTLTRKYAADIDGVL WA E+R RLAQLDVSEEGLA+L R Sbjct 300 LPVDASALESRLARQAELRTLTRKYAADIDGVLAWARESRERLAQLDVSEEGLASLAARV 359 Query 361 GELAHELGQAAVDLSTIRRKAAKRLAKEVSAELSALAMADAEFTIGVTTELADHGDPVA- 419 ELA EL +AAVDLS IRRKAAKRLAKEV+AELS LAMADA+F I V+ + A D A Sbjct 360 DELARELAEAAVDLSNIRRKAAKRLAKEVTAELSGLAMADAQFGIDVSVDTASGADDAAS 419 Query 420 LALASGE----LARAGADGVDAVEFGFVAHRGMTVLPLAKSASGGELSRVMLSLEVVLAT 475 L ++ G LARAGA G+D VEFGF AHRGM LPLAKSASGGELSRVML+LEVVLA Sbjct 420 LTVSFGPDGPMLARAGAGGIDQVEFGFAAHRGMDQLPLAKSASGGELSRVMLALEVVLAA 479 Query 476 SRKQAAGTTMVFDEIDAGVGGWAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLMVQ 535 SRK+ GTTMVFDE+DAGVGG AAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHL+V Sbjct 480 SRKETVGTTMVFDEVDAGVGGRAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLVVH 539 Query 536 RTGRDGASGVRRLTSEDRVAELARMLAGLGDSDSGRAHARELLETAQNDEL 586 G G S VRR+ ++RVAELARMLAGLG+SDSGRAHARELL+ AQ DE+ Sbjct 540 GAGPKGTSVVRRVADDERVAELARMLAGLGESDSGRAHARELLQAAQKDEI 590 >gi|333990492|ref|YP_004523106.1| DNA repair protein RecN [Mycobacterium sp. JDM601] gi|333486460|gb|AEF35852.1| DNA repair protein RecN [Mycobacterium sp. JDM601] Length=598 Score = 776 bits (2004), Expect = 0.0, Method: Compositional matrix adjust. Identities = 435/585 (75%), Positives = 473/585 (81%), Gaps = 7/585 (1%) Query 1 VLTELRIESLGAISVATAEFDRGFTVLTGETGTGKTMVVTGLHLLGGARADATRVRSGAD 60 +LTE+RIESLGAI ATAEFDRG TVLTGETGTGKTMVVTGLHLLGGARADA RVRSGA Sbjct 1 MLTEIRIESLGAIQAATAEFDRGLTVLTGETGTGKTMVVTGLHLLGGARADANRVRSGAT 60 Query 61 RAVVEGRFTTTDLDDATVAGLQAVLDSSGAERDEDGSVIALRSISRDGPSRAYLGGRGVP 120 RAVVEGRF T DL A+ A + +L+SSGAERDEDGSVIA RS+SRDGPSRAYLGGRGVP Sbjct 61 RAVVEGRFCTADLAPASAAQIDELLESSGAERDEDGSVIAARSVSRDGPSRAYLGGRGVP 120 Query 121 AKSLSGFTNELLTLHGQNDQLRLMRPDEQRGALDRFAAAGEAVQRYRKLRDAWLTARRDL 180 AKSLSGFT LLTLHGQNDQLRLMRPDEQRGALDRFAA G ++RYR R+AWL+ARRDL Sbjct 121 AKSLSGFTGGLLTLHGQNDQLRLMRPDEQRGALDRFAAVGARLERYRSAREAWLSARRDL 180 Query 181 VDRRNRARELAQEADRLKFALNEIDTVDPQPGEDVALVADIARLSELDTLREAATTARAT 240 +DRRNRARELAQEADRL FAL EID VDP PGED AL +I RLSELD LR AA ARA Sbjct 181 IDRRNRARELAQEADRLTFALREIDDVDPCPGEDDALTVEIRRLSELDALRAAAAGARAA 240 Query 241 LCGTPDADA--FDRGAVDSLGRARAALQSSDDAALRGLAEQVGEALTVVVDAVAELGAYL 298 L G D DA A D LG+AR AL +DD AL+ L +Q+GEALTVV D ELG YL Sbjct 241 LAGGADDDAATAPTSATDRLGQARTALTGTDDGALQALGDQLGEALTVVGDVARELGGYL 300 Query 299 DELPADASALDAKLARQAQLRTLTRKYAADIDGVLRWADEARARLAQLDVSEEGLAALER 358 DELP ALDAKLARQA+LR+LTRKYAAD+D VL WA E+R RLAQLDVSEE LAAL Sbjct 301 DELPTGTDALDAKLARQAELRSLTRKYAADVDEVLAWAAESRERLAQLDVSEEALAALSD 360 Query 359 RTGELAHELGQAAVDLSTIRRKAAKRLAKEVSAELSALAMADAEFTIGVTTELADHGDPV 418 R EL + + A DLS R KAA LAK VSAELS LAMADAEF++GV A DP Sbjct 361 RAEELGQRVVKTATDLSAARGKAAGSLAKAVSAELSGLAMADAEFSVGVHHSPAADDDPA 420 Query 419 ALALASGELARAGADGVDAVEFGFVAHRGMTVLPLAKSASGGELSRVMLSLEVV-----L 473 AL L SG++ AGADG+D VEFG AHRGMTVLPLAKSASGGELSRVML+LEVV L Sbjct 421 ALRLPSGQVVHAGADGIDDVEFGLAAHRGMTVLPLAKSASGGELSRVMLALEVVLATSSL 480 Query 474 ATSRKQAAGTTMVFDEIDAGVGGWAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLM 533 + S + +AGTTMVFDE+DAGVGG AAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLM Sbjct 481 SASSRDSAGTTMVFDEVDAGVGGRAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLM 540 Query 534 VQRTGRDGASGVRRLTSEDRVAELARMLAGLGDSDSGRAHARELL 578 V+ TG DGASGVRRLT EDRV ELARMLAGLG++D+ RAHARELL Sbjct 541 VEPTGSDGASGVRRLTDEDRVGELARMLAGLGETDTARAHARELL 585 >gi|120404263|ref|YP_954092.1| DNA repair protein RecN [Mycobacterium vanbaalenii PYR-1] gi|119957081|gb|ABM14086.1| DNA replication and repair protein RecN [Mycobacterium vanbaalenii PYR-1] Length=591 Score = 752 bits (1942), Expect = 0.0, Method: Compositional matrix adjust. Identities = 422/587 (72%), Positives = 470/587 (81%), Gaps = 14/587 (2%) Query 1 VLTELRIESLGAISVATAEFDRGFTVLTGETGTGKTMVVTGLHLLGGARADATRVRSGAD 60 +L E+RIE+LGAIS ATAEFD G TVLTGETG GKTMVVTGLHLLGGARADAT+VRSGAD Sbjct 1 MLAEIRIEALGAISAATAEFDGGLTVLTGETGAGKTMVVTGLHLLGGARADATKVRSGAD 60 Query 61 RAVVEGRFTTTDLDDATVAGLQAVLDSSGAERDEDGSVIALRSISRDGPSRAYLGGRGVP 120 RAVVEGRFTT ++ DA A + +LDSSGAERD+DGSVIA RS+SRDGPSRAYLGGR VP Sbjct 61 RAVVEGRFTTAEVGDAVAAQVDGILDSSGAERDDDGSVIAARSVSRDGPSRAYLGGRSVP 120 Query 121 AKSLSGFTNELLTLHGQNDQLRLMRPDEQRGALDRFAAAGEAVQRYRKLRDAWLTARRDL 180 AKSLSGFTNELLTLHGQNDQLRLMRPDEQR ALDR+A + RYR RD+WL A+RDL Sbjct 121 AKSLSGFTNELLTLHGQNDQLRLMRPDEQRAALDRYADVATQLHRYRTARDSWLEAKRDL 180 Query 181 VDRRNRARELAQEADRLKFALNEIDTVDPQPGEDVALVADIARLSELDTLREAATTARAT 240 DRR RARE+AQEADRL+FALNEID +DP GED ALVA+I RLSELD LREA TARA Sbjct 181 DDRRRRAREMAQEADRLQFALNEIDVIDPHSGEDDALVAEIRRLSELDALREAVQTARAA 240 Query 241 LCGTPDADAFDRGAVDSLGRARAALQSSDDAALRGLAEQVGEALTVVVDAVAELGAYLDE 300 L G D D F A ++G+AR+AL+ +DDA L+ LAEQ+G ALTV+VD AELG YLDE Sbjct 241 LSGESD-DGF--SAAHAVGQARSALEGTDDAPLKALAEQLGSALTVLVDVSAELGGYLDE 297 Query 301 LPADASALDAKLARQAQLRTLTRKYAADIDGVLRWADEARARLAQLDVSEEGLAALERRT 360 LP D S+L+ KLARQA+LRTLTRKYAAD+DGVL WA EAR RLA LDVSEE LA LERR Sbjct 298 LPTDTSSLETKLARQAELRTLTRKYAADVDGVLAWAGEARDRLAALDVSEETLAGLERRV 357 Query 361 GELAHELGQAAVDLSTIRRKAAKRLAKEVSAELSALAMADAEFTIGVTTELADHGDPVAL 420 EL + AA DL+ +R KAAK L+K V+AELS LAMA A+F I VT A D L Sbjct 358 EELQATVVAAAQDLTKVRVKAAKGLSKAVTAELSGLAMAGADFAISVTPLPARADDSAPL 417 Query 421 ALASGELARAGADGVDAVEFGFVAHRGMTVLPLAKSASGGELSRVMLSLEVVLATSRKQA 480 AL SG AG DGVDAVEFGF AH G +LPL KSASGGELSRVML+LEVVL+ S + Sbjct 418 ALPSGVTVHAGHDGVDAVEFGFAAHGGSDLLPLNKSASGGELSRVMLALEVVLSASTE-- 475 Query 481 AGTTMVFDEIDAGVGGWAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLMVQ----- 535 GTTMVFDE+DAGVGG AAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHL+V+ Sbjct 476 -GTTMVFDEVDAGVGGRAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLVVEGVAGR 534 Query 536 ---RTGRDGASGVRRLTSEDRVAELARMLAGLGDSDSGRAHARELLE 579 R R +SGVRRL +DRVAELARMLAGLG+SDSGRAHARELL+ Sbjct 535 DDGRKARAKSSGVRRLDDDDRVAELARMLAGLGESDSGRAHARELLD 581 >gi|145224091|ref|YP_001134769.1| DNA repair protein RecN [Mycobacterium gilvum PYR-GCK] gi|315444428|ref|YP_004077307.1| DNA replication and repair protein RecN [Mycobacterium sp. Spyr1] gi|145216577|gb|ABP45981.1| DNA replication and repair protein RecN [Mycobacterium gilvum PYR-GCK] gi|315262731|gb|ADT99472.1| DNA replication and repair protein RecN [Mycobacterium sp. Spyr1] Length=598 Score = 743 bits (1919), Expect = 0.0, Method: Compositional matrix adjust. Identities = 421/597 (71%), Positives = 473/597 (80%), Gaps = 16/597 (2%) Query 1 VLTELRIESLGAISVATAEFDRGFTVLTGETGTGKTMVVTGLHLLGGARADATRVRSGAD 60 +L E+RIE+LGAI+ ATAEFD G TVLTGETG GKTMVVTGLHLLGGARADAT+VRSG+D Sbjct 1 MLAEIRIEALGAINAATAEFDGGLTVLTGETGAGKTMVVTGLHLLGGARADATKVRSGSD 60 Query 61 RAVVEGRFTTTDLDDATVAGLQAVLDSSGAERDEDGSVIALRSISRDGPSRAYLGGRGVP 120 RAVVEGRFTTT++ DA A + +LDSSGAERD+DGSVIA RS+SRDGPSRAYLGGR VP Sbjct 61 RAVVEGRFTTTEVGDAVSARVDGILDSSGAERDDDGSVIAARSVSRDGPSRAYLGGRSVP 120 Query 121 AKSLSGFTNELLTLHGQNDQLRLMRPDEQRGALDRFAAAGEAVQRYRKLRDAWLTARRDL 180 AKSLSGFTNELLTLHGQNDQLRLMRPDEQR ALDR+A + RYR RDAWL ARRDL Sbjct 121 AKSLSGFTNELLTLHGQNDQLRLMRPDEQRNALDRYADVTRRLDRYRSARDAWLEARRDL 180 Query 181 VDRRNRARELAQEADRLKFALNEIDTVDPQPGEDVALVADIARLSELDTLREAATTARAT 240 DRR R RELAQEADRL FALNEID VDP+PGED ALVADI RLSELD LR+A TARA Sbjct 181 EDRRRRTRELAQEADRLHFALNEIDVVDPKPGEDEALVADIRRLSELDALRDAVQTARAA 240 Query 241 LCGTPDADAFD-RGAVDSLGRARAALQSSDDAALRGLAEQVGEALTVVVDAVAELGAYLD 299 L G D A D A ++G+AR+AL+++DD AL+ LAEQ+G ALTVVVD AELG +L Sbjct 241 LAGDGDDSAHDGFSAAGAVGQARSALENTDDVALKSLAEQLGAALTVVVDVSAELGHFLA 300 Query 300 ELPADASALDAKLARQAQLRTLTRKYAADIDGVLRWADEARARLAQLDVSEEGLAALERR 359 ELP+DAS L+ KLARQA+LRTLTRKYAADIDGVL WA EAR RL+ LDVSEE L L+RR Sbjct 301 ELPSDASTLETKLARQAELRTLTRKYAADIDGVLAWAVEARERLSALDVSEETLTGLQRR 360 Query 360 TGELAHELGQAAVDLSTIRRKAAKRLAKEVSAELSALAMADAEFTIGVTTELADHGDPVA 419 EL + AA D++ +R KAAK L+K V+AEL+ LAM+ A+F I V A D Sbjct 361 VDELQSAVVAAAQDVTKVRSKAAKGLSKAVTAELAGLAMSGAQFAITVAPLAARADDSAP 420 Query 420 LALASGELARAGADGVDAVEFGFVAHRGMTVLPLAKSASGGELSRVMLSLEVVLATSRKQ 479 L L SG AG DGVDAVEFGF AH G +LPL KSASGGELSRVML+LEVVL+ S + Sbjct 421 LELPSGVTVHAGRDGVDAVEFGFAAHGGSDLLPLNKSASGGELSRVMLALEVVLSASTE- 479 Query 480 AAGTTMVFDEIDAGVGGWAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLMVQRTGR 539 GTTMVFDE+DAGVGG AAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHL+V+ G Sbjct 480 --GTTMVFDEVDAGVGGRAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLVVEGVGN 537 Query 540 DGA------------SGVRRLTSEDRVAELARMLAGLGDSDSGRAHARELLETAQND 584 DGA SGVRRL +DRVAELARMLAGLG+SDSGRAHAR+LL+ A+ D Sbjct 538 DGAGSGDGKKARAKSSGVRRLDDDDRVAELARMLAGLGESDSGRAHARDLLDAARKD 594 >gi|126435543|ref|YP_001071234.1| DNA repair protein RecN [Mycobacterium sp. JLS] gi|126235343|gb|ABN98743.1| DNA replication and repair protein RecN [Mycobacterium sp. JLS] Length=587 Score = 708 bits (1827), Expect = 0.0, Method: Compositional matrix adjust. Identities = 413/585 (71%), Positives = 459/585 (79%), Gaps = 8/585 (1%) Query 1 VLTELRIESLGAISVATAEFDRGFTVLTGETGTGKTMVVTGLHLLGGARADATRVRSGAD 60 +L+E+RIESLGAIS ATAEFDRG TVLTGETG GKTMVVTGLHLLGGARAD RVRSG++ Sbjct 1 MLSEIRIESLGAISAATAEFDRGLTVLTGETGAGKTMVVTGLHLLGGARADPNRVRSGSE 60 Query 61 RAVVEGRFTTTDLDDATVAGLQAVLDSSGAERDEDGSVIALRSISRDGPSRAYLGGRGVP 120 RAVVEGRF T+DL D + +L+SSGAERD+DGS+IA RS+S+DGPSRAYLGGR VP Sbjct 61 RAVVEGRFLTSDLGDGVARRVDDLLESSGAERDDDGSIIAARSVSKDGPSRAYLGGRSVP 120 Query 121 AKSLSGFTNELLTLHGQNDQLRLMRPDEQRGALDRFAAAGEAVQRYRKLRDAWLTARRDL 180 AKSLS FT ELLTLHGQNDQLRLMRPDEQR ALDRFAA + ++RYR RD WL ARRDL Sbjct 121 AKSLSNFTTELLTLHGQNDQLRLMRPDEQRAALDRFAAVDKPLRRYRAARDEWLAARRDL 180 Query 181 VDRRNRARELAQEADRLKFALNEIDTVDPQPGEDVALVADIARLSELDTLREAATTARAT 240 DRR R RELAQEADRLKF L EID VDP PGED ALV DI RLSELD LREAA TARA Sbjct 181 TDRRRRERELAQEADRLKFGLTEIDNVDPSPGEDDALVDDIRRLSELDALREAALTARAA 240 Query 241 LCGT---PDADAFDRGAVDSLGRARAALQSSDDAALRGLAEQVGEALTVVVDAVAELGAY 297 L G P DA A + +A++AL +DDA LR L Q+ +A+ V+ D ELG Y Sbjct 241 LTGADDDPTGDAM--SAANLAAQAKSALDGTDDATLRSLGAQLADAVAVIGDVAGELGDY 298 Query 298 LDELPADASALDAKLARQAQLRTLTRKYAADIDGVLRWADEARARLAQLDVSEEGLAALE 357 L LP DAS L+ KLARQA+LRTLTRKYAADIDGVL WA E+R RL QLDVSEE LA LE Sbjct 299 LGALPTDASTLENKLARQAELRTLTRKYAADIDGVLAWARESRERLDQLDVSEEALAGLE 358 Query 358 RRTGELAHELGQAAVDLSTIRRKAAKRLAKEVSAELSALAMADAEFTIGVTTELADHGDP 417 RR GEL ++ AA DL+ R KAAK LAK V+AELS LAMA AEFT+GV D Sbjct 359 RRVGELQAQVVAAAADLTKARLKAAKGLAKAVTAELSGLAMAGAEFTVGVAPLAVRADDS 418 Query 418 VALALASGELARAGADGVDAVEFGFVAHRGMTVLPLAKSASGGELSRVMLSLEVVLATSR 477 L L G + AG DGVDAV+FGF AHRG VLPL+KSASGGELSRVML++EVVLA S Sbjct 419 APLTLPDGVVVHAGHDGVDAVDFGFAAHRGTDVLPLSKSASGGELSRVMLAIEVVLAAS- 477 Query 478 KQAAGTTMVFDEIDAGVGGWAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLMVQRT 537 A GTTMVFDE+DAGVGG AAVQIGRRLARLARTHQVIVVTHLPQVAAYAD HL+V + Sbjct 478 --AEGTTMVFDEVDAGVGGRAAVQIGRRLARLARTHQVIVVTHLPQVAAYADAHLVVDSS 535 Query 538 GRDGASGVRRLTSEDRVAELARMLAGLGDSDSGRAHARELLETAQ 582 GR ASGVRR+ +DRVAELARMLAGLG+SDSGRAHARELL+ A+ Sbjct 536 GRGKASGVRRIDDDDRVAELARMLAGLGESDSGRAHARELLDAAR 580 >gi|108799915|ref|YP_640112.1| DNA repair protein RecN [Mycobacterium sp. MCS] gi|119869025|ref|YP_938977.1| DNA repair protein RecN [Mycobacterium sp. KMS] gi|108770334|gb|ABG09056.1| DNA replication and repair protein RecN [Mycobacterium sp. MCS] gi|119695114|gb|ABL92187.1| DNA replication and repair protein RecN [Mycobacterium sp. KMS] Length=590 Score = 707 bits (1824), Expect = 0.0, Method: Compositional matrix adjust. Identities = 413/588 (71%), Positives = 460/588 (79%), Gaps = 11/588 (1%) Query 1 VLTELRIESLGAISVATAEFDRGFTVLTGETGTGKTMVVTGLHLLGGARADATRVRSGAD 60 +L+E+RIESLGAIS ATAEFDRG TVLTGETG GKTMVVTGLHLLGGARAD RVRSG++ Sbjct 1 MLSEIRIESLGAISAATAEFDRGLTVLTGETGAGKTMVVTGLHLLGGARADPNRVRSGSE 60 Query 61 RAVVEGRFTTTDLDDATVAGLQAVLDSSGAERDEDGSVIALRSISRDGPSRAYLGGRGVP 120 RAVVEGRF T+DL D + +L+SSGAERD+DGS+IA RS+S+DGPSRAYLGGR VP Sbjct 61 RAVVEGRFLTSDLGDGVARRVDDLLESSGAERDDDGSIIAARSVSKDGPSRAYLGGRSVP 120 Query 121 AKSLSGFTNELLTLHGQNDQLRLMRPDEQRGALDRFAAAGEAVQRYRKLRDAWLTARRDL 180 AKSLS FT ELLTLHGQNDQLRLMRPDEQR ALDRFAA + ++RYR RD WL ARRDL Sbjct 121 AKSLSNFTTELLTLHGQNDQLRLMRPDEQRAALDRFAAVDKPLRRYRAARDEWLAARRDL 180 Query 181 VDRRNRARELAQEADRLKFALNEIDTVDPQPGEDVALVADIARLSELDTLREAATTARAT 240 DRR R RELAQEADRLKF L EID VDP PGED ALV DI RLSELD LREAA TARA Sbjct 181 TDRRRRERELAQEADRLKFGLTEIDNVDPSPGEDDALVDDIRRLSELDALREAALTARAA 240 Query 241 LCGT---PDADAFDRGAVDSLGRARAALQSSDDAALRGLAEQVGEALTVVVDAVAELGAY 297 L G P DA A + +A++AL +DDA LR L Q+ +A+ V+ D ELG Y Sbjct 241 LTGADDDPTGDAM--SAANLAAQAKSALDGTDDATLRSLGAQLADAVAVIGDVAGELGDY 298 Query 298 LDELPADASALDAKLARQAQLRTLTRKYAADIDGVLRWADEARARLAQLDVSEEGLAALE 357 L LP DAS L+ KLARQA+LRTLTRKYAADIDGVL WA E+R RL QLDVSEE LA LE Sbjct 299 LGALPTDASTLETKLARQAELRTLTRKYAADIDGVLAWARESRERLDQLDVSEEALAGLE 358 Query 358 RRTGELAHELGQAAVDLSTIRRKAAKRLAKEVSAELSALAMADAEFTIGVTTELADHGDP 417 RR GEL ++ AA DL+ R KAAK LAK V+AELS LAMA AEFT+GV A D Sbjct 359 RRVGELQAQVVVAAADLTKARLKAAKGLAKAVTAELSGLAMAGAEFTVGVAPLAARADDS 418 Query 418 VALALASGELARAGADGVDAVEFGFVAHRGMTVLPLAKSASGGELSRVMLSLEVVLATSR 477 L L G + AG DGVDAV+FGF AHRG VLPL+KSASGGELSRVML++EVVLA S Sbjct 419 APLTLPDGVVVHAGHDGVDAVDFGFAAHRGTDVLPLSKSASGGELSRVMLAIEVVLAAS- 477 Query 478 KQAAGTTMVFDEIDAGVGGWAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLMVQRT 537 A GTTMVFDE+DAGVGG AAVQIGRRLARLARTHQVIVVTHLPQVAAYAD HL+V + Sbjct 478 --AEGTTMVFDEVDAGVGGRAAVQIGRRLARLARTHQVIVVTHLPQVAAYADAHLVVDGS 535 Query 538 GR---DGASGVRRLTSEDRVAELARMLAGLGDSDSGRAHARELLETAQ 582 G+ ASGVRR+ +DRVAELARMLAGLG+SDSGRAHARELL+ A+ Sbjct 536 GQGKAGKASGVRRIDDDDRVAELARMLAGLGESDSGRAHARELLDAAR 583 >gi|336441054|gb|AEI54752.1| DNA repair protein RecN [Mycobacterium chelonae] Length=589 Score = 697 bits (1800), Expect = 0.0, Method: Compositional matrix adjust. Identities = 399/591 (68%), Positives = 454/591 (77%), Gaps = 11/591 (1%) Query 1 VLTELRIESLGAISVATAEFDRGFTVLTGETGTGKTMVVTGLHLLGGARADATRVRSGAD 60 +LTE+RIESLGAI VATAEFD G TVLTGETG GKTMVVT LHLLGGARADA RVR+GAD Sbjct 1 MLTEIRIESLGAIPVATAEFDSGLTVLTGETGAGKTMVVTSLHLLGGARADANRVRAGAD 60 Query 61 RAVVEGRFTTTDLDDATVAGLQAVLDSSGAERDEDGSVIALRSISRDGPSRAYLGGRGVP 120 RAVVEGRF TTD A A + +LDSSGA+RD+DGSVIA RS++ DG SRAYLGGR VP Sbjct 61 RAVVEGRFLTTDPLGAEPADVTEILDSSGAQRDDDGSVIAARSVTSDGRSRAYLGGRSVP 120 Query 121 AKSLSGFTNELLTLHGQNDQLRLMRPDEQRGALDRFAAAGEA-----VQRYRKLRDAWLT 175 AKSL+ FT LLT+HGQNDQLRLMRP++Q ALDRFA+ G + YRKLR+ WLT Sbjct 121 AKSLASFTAGLLTVHGQNDQLRLMRPEQQLAALDRFASEGPGSIEALLTTYRKLREEWLT 180 Query 176 ARRDLVDRRNRARELAQEADRLKFALNEIDTVDPQPGEDVALVADIARLSELDTLREAAT 235 ARRDL+DR NRARELAQEADRL FALNEIDTVDP+PGED L ADI RLSELD LR+AA Sbjct 181 ARRDLIDRTNRARELAQEADRLGFALNEIDTVDPKPGEDDQLTADIHRLSELDALRDAAG 240 Query 236 TARATLCG--TPDADAFDRGAVDSLGRARAALQSSDDAALRGLAEQVGEALTVVVDAVAE 293 +AR L G + D A+D + +A+ L+++DDAAL+ LA Q+ EAL VV D E Sbjct 241 SARGALAGADSEGGDDDSDSAIDRIAKAKVLLEATDDAALQALAPQLAEALAVVSDVARE 300 Query 294 LGAYLDELPADASALDAKLARQAQLRTLTRKYAADIDGVLRWADEARARLAQLDVSEEGL 353 L A+ DELP+DAS L+ KLARQ LRTLTRKYAAD+ GV+ WA EAR RLA++D SEE L Sbjct 301 LTAFTDELPSDASTLEEKLARQGLLRTLTRKYAADLGGVIAWAQEARGRLAEVDTSEETL 360 Query 354 AALERRTGELAHELGQAAVDLSTIRRKAAKRLAKEVSAELSALAMADAEFTIGVTTELAD 413 A+ R LA EL AA+ LS R KAAK L K V+AEL+ LAM A FTI V A Sbjct 361 NAIAARVDRLAGELAVAAMALSKARAKAAKALGKAVTAELAGLAMDRAVFTIAVEPIAAR 420 Query 414 HGDPVALALASGELARAGADGVDAVEFGFVAHRGMTVLPLAKSASGGELSRVMLSLEVVL 473 D LAL SG++ AG+ G DAVEFGF AHR +LPLAKSASGGELSRVML+LEVVL Sbjct 421 ADDSAPLALPSGQIVHAGSAGTDAVEFGFAAHRDNPLLPLAKSASGGELSRVMLALEVVL 480 Query 474 ATSRKQAAGTTMVFDEIDAGVGGWAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLM 533 A S AGTTMVFDE+DAGVGG AAVQIGRRLA+LA THQVIVVTHLPQVAA+AD+HL Sbjct 481 AAS---TAGTTMVFDEVDAGVGGRAAVQIGRRLAKLAHTHQVIVVTHLPQVAAFADIHLT 537 Query 534 VQRTGRDGASGVRRLTSEDRVAELARMLAGLGDSDSGRAHARELLETAQND 584 V R G SGVRRL EDRVAELARMLAGLGDSD+GRAHARELL+ A+++ Sbjct 538 VDRVNSKG-SGVRRLDDEDRVAELARMLAGLGDSDTGRAHARELLDAARSE 587 >gi|336441056|gb|AEI54753.1| DNA repair protein RecN [Mycobacterium immunogenum] Length=586 Score = 696 bits (1797), Expect = 0.0, Method: Compositional matrix adjust. Identities = 401/586 (69%), Positives = 456/586 (78%), Gaps = 8/586 (1%) Query 1 VLTELRIESLGAISVATAEFDRGFTVLTGETGTGKTMVVTGLHLLGGARADATRVRSGAD 60 +LTE+RIESLGAI ATAEFD G TVLTGETG GKTMVVT LHLLGGARADA RVR+GAD Sbjct 1 MLTEIRIESLGAIPAATAEFDSGLTVLTGETGAGKTMVVTSLHLLGGARADANRVRAGAD 60 Query 61 RAVVEGRFTTTDLDDATVAGLQAVLDSSGAERDEDGSVIALRSISRDGPSRAYLGGRGVP 120 RAVVEGRF T D A A + VLDSSGA+RD+DGSVIA RS++ DG SRAYLGGR VP Sbjct 61 RAVVEGRFLTADPLGAEPADVTEVLDSSGAQRDDDGSVIAARSVTSDGRSRAYLGGRSVP 120 Query 121 AKSLSGFTNELLTLHGQNDQLRLMRPDEQRGALDRFAA-AGEAV-QRYRKLRDAWLTARR 178 AKSL+GFT LLT+HGQNDQLRLMRP++Q ALDRFA + EA+ YRKLR+ WLTARR Sbjct 121 AKSLAGFTAGLLTVHGQNDQLRLMRPEQQLAALDRFATDSIEALLTTYRKLREEWLTARR 180 Query 179 DLVDRRNRARELAQEADRLKFALNEIDTVDPQPGEDVALVADIARLSELDTLREAATTAR 238 DL+DR NRARELAQEADRL FALNEIDTVDP+PGED L ADI RLSELD LR+AA +AR Sbjct 181 DLIDRTNRARELAQEADRLGFALNEIDTVDPKPGEDDQLTADIHRLSELDALRDAAASAR 240 Query 239 ATLCGT-PDADAFDR-GAVDSLGRARAALQSSDDAALRGLAEQVGEALTVVVDAVAELGA 296 L G + +A D A+D + +A+ L+++DDA LR LA Q+ EAL VV D EL A Sbjct 241 GALAGVETEGEAGDSLSAIDRIAKAKVLLEATDDAVLRALAPQLAEALAVVSDVSRELTA 300 Query 297 YLDELPADASALDAKLARQAQLRTLTRKYAADIDGVLRWADEARARLAQLDVSEEGLAAL 356 + DELP+DAS L+ KLARQ QLRTLTRKYAAD++GV+ WA++ARARLA++D SEE L A+ Sbjct 301 FTDELPSDASTLEEKLARQGQLRTLTRKYAADLNGVIAWANDARARLAEVDTSEEALGAI 360 Query 357 ERRTGELAHELGQAAVDLSTIRRKAAKRLAKEVSAELSALAMADAEFTIGVTTELADHGD 416 R LA EL AA L+ R KAAK L K V+AEL+ LAM A FTIGV A D Sbjct 361 SARVDRLAAELATAATALTKARTKAAKALGKAVTAELAGLAMDRAAFTIGVEPMAARADD 420 Query 417 PVALALASGELARAGADGVDAVEFGFVAHRGMTVLPLAKSASGGELSRVMLSLEVVLATS 476 L L +G+ AG+ G DAVEFGF AHR +LPLAKSASGGELSRVML+LEVVLA S Sbjct 421 SAPLTLPTGQTVHAGSAGADAVEFGFAAHRDNPMLPLAKSASGGELSRVMLALEVVLAAS 480 Query 477 RKQAAGTTMVFDEIDAGVGGWAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLMVQR 536 AGTTMVFDE+DAGVGG AAVQIGRRLA+LARTHQVIVVTHLPQVAA+AD+HL V R Sbjct 481 ---TAGTTMVFDEVDAGVGGRAAVQIGRRLAKLARTHQVIVVTHLPQVAAFADIHLTVDR 537 Query 537 TGRDGASGVRRLTSEDRVAELARMLAGLGDSDSGRAHARELLETAQ 582 G SGVRRL EDRVAELARMLAGLGDSD+GRAHARELL+ A+ Sbjct 538 VNSKG-SGVRRLDDEDRVAELARMLAGLGDSDTGRAHARELLDAAR 582 >gi|336441058|gb|AEI54754.1| DNA repair protein RecN [Mycobacterium massiliense] Length=586 Score = 694 bits (1792), Expect = 0.0, Method: Compositional matrix adjust. Identities = 403/586 (69%), Positives = 453/586 (78%), Gaps = 8/586 (1%) Query 1 VLTELRIESLGAISVATAEFDRGFTVLTGETGTGKTMVVTGLHLLGGARADATRVRSGAD 60 +LTE+RIESLGAI ATAEFD G TVLTGETG GKTMVVT LHLLGGARADA RVR+GAD Sbjct 1 MLTEIRIESLGAIPAATAEFDSGLTVLTGETGAGKTMVVTSLHLLGGARADANRVRAGAD 60 Query 61 RAVVEGRFTTTDLDDATVAGLQAVLDSSGAERDEDGSVIALRSISRDGPSRAYLGGRGVP 120 RAVVEGRF TTD A A + VLDSSGA+RDEDGSVIA RS++ DG SRAYLGGR VP Sbjct 61 RAVVEGRFLTTDPLGAEPAEVTEVLDSSGAQRDEDGSVIAARSVTSDGRSRAYLGGRSVP 120 Query 121 AKSLSGFTNELLTLHGQNDQLRLMRPDEQRGALDRFAA-AGEAV-QRYRKLRDAWLTARR 178 AKSL+ FT LLT+HGQNDQLRLMRP++Q ALD+FA + EA+ YRKLR+ WLTARR Sbjct 121 AKSLASFTAGLLTVHGQNDQLRLMRPEQQLAALDKFATDSIEALLTTYRKLREEWLTARR 180 Query 179 DLVDRRNRARELAQEADRLKFALNEIDTVDPQPGEDVALVADIARLSELDTLREAATTAR 238 DL+DR NR RELAQEADRL FALNEIDTVDP+PGED L ADI RLSELD LR+AA +AR Sbjct 181 DLIDRTNRVRELAQEADRLGFALNEIDTVDPKPGEDDQLTADIHRLSELDALRDAAASAR 240 Query 239 ATLCGT-PDADAFD-RGAVDSLGRARAALQSSDDAALRGLAEQVGEALTVVVDAVAELGA 296 L G+ D DA D AVD + RA+A ++++DDA LR LA Q+ EAL VV D EL A Sbjct 241 EALAGSDADGDAHDSHSAVDRIARAKALVEATDDAVLRALAPQLAEALAVVSDVSRELAA 300 Query 297 YLDELPADASALDAKLARQAQLRTLTRKYAADIDGVLRWADEARARLAQLDVSEEGLAAL 356 + DELP+DAS L+ KLARQ QLRTLTRKYAAD++GV+ WA EAR RLA++D SEE L A+ Sbjct 301 FTDELPSDASTLEEKLARQGQLRTLTRKYAADLNGVIAWAKEARTRLAEVDTSEETLNAI 360 Query 357 ERRTGELAHELGQAAVDLSTIRRKAAKRLAKEVSAELSALAMADAEFTIGVTTELADHGD 416 R L EL AA LS R KAAK L+K V+AEL+ LAM A FTI V A D Sbjct 361 AARVDRLGAELATAATGLSKARAKAAKALSKAVTAELAGLAMDRAAFTISVEPIAARSDD 420 Query 417 PVALALASGELARAGADGVDAVEFGFVAHRGMTVLPLAKSASGGELSRVMLSLEVVLATS 476 L L SG+ AG+ G DAVEFGF AHR +LPLAKSASGGELSRVML+LEVVLA S Sbjct 421 SAPLTLPSGQTVHAGSSGTDAVEFGFAAHRDNPLLPLAKSASGGELSRVMLALEVVLAAS 480 Query 477 RKQAAGTTMVFDEIDAGVGGWAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLMVQR 536 AGTTMVFDE+DAGVGG AAVQIGRRLA+LA THQVIVVTHLPQVAA+AD+HL V R Sbjct 481 ---TAGTTMVFDEVDAGVGGRAAVQIGRRLAKLAHTHQVIVVTHLPQVAAFADIHLTVDR 537 Query 537 TGRDGASGVRRLTSEDRVAELARMLAGLGDSDSGRAHARELLETAQ 582 G SGVRRL EDRVAELARMLAGLGDSD+GRAHARELL+ A+ Sbjct 538 VNSKG-SGVRRLDDEDRVAELARMLAGLGDSDTGRAHARELLDAAR 582 >gi|336441052|gb|AEI54751.1| DNA repair protein RecN [Mycobacterium bolletii] Length=586 Score = 693 bits (1789), Expect = 0.0, Method: Compositional matrix adjust. Identities = 402/586 (69%), Positives = 453/586 (78%), Gaps = 8/586 (1%) Query 1 VLTELRIESLGAISVATAEFDRGFTVLTGETGTGKTMVVTGLHLLGGARADATRVRSGAD 60 +LTE+RIESLGAI ATAEFD G TVLTGETG GKTMVVT LHLLGGARADA RVR+GAD Sbjct 1 MLTEIRIESLGAIPAATAEFDSGLTVLTGETGAGKTMVVTSLHLLGGARADANRVRAGAD 60 Query 61 RAVVEGRFTTTDLDDATVAGLQAVLDSSGAERDEDGSVIALRSISRDGPSRAYLGGRGVP 120 RAVVEGRF TTD A A + VLDSSGA+RDEDGSVIA RS++ DG SRAYLGGR VP Sbjct 61 RAVVEGRFLTTDPLGAEPAEVTEVLDSSGAQRDEDGSVIAARSVTSDGRSRAYLGGRSVP 120 Query 121 AKSLSGFTNELLTLHGQNDQLRLMRPDEQRGALDRFAA-AGEAV-QRYRKLRDAWLTARR 178 AKSL+ FT LLT+HGQNDQLRLMRP++Q ALD+FA + EA+ YRKLR+ WLTARR Sbjct 121 AKSLASFTAGLLTVHGQNDQLRLMRPEQQLAALDKFATDSIEALLTTYRKLREEWLTARR 180 Query 179 DLVDRRNRARELAQEADRLKFALNEIDTVDPQPGEDVALVADIARLSELDTLREAATTAR 238 DL+DR NR RELAQEADRL FALNEIDTVDP+PGED L A+I RLSELD LR+AA +AR Sbjct 181 DLIDRTNRVRELAQEADRLGFALNEIDTVDPKPGEDDQLTAEIHRLSELDALRDAAASAR 240 Query 239 ATLCGT-PDADAFD-RGAVDSLGRARAALQSSDDAALRGLAEQVGEALTVVVDAVAELGA 296 L G+ D DA D AVD + RA+A ++++DDA LR LA Q+ EAL VV D EL A Sbjct 241 EALAGSDADGDAHDSHSAVDRIARAKALVEATDDAVLRALAPQLAEALAVVSDVSRELAA 300 Query 297 YLDELPADASALDAKLARQAQLRTLTRKYAADIDGVLRWADEARARLAQLDVSEEGLAAL 356 + DELP+DAS L+ KLARQ QLRTLTRKYAAD++GV+ WA EAR RLA++D SEE L A+ Sbjct 301 FTDELPSDASTLEEKLARQGQLRTLTRKYAADLNGVIAWAKEARTRLAEVDTSEETLNAI 360 Query 357 ERRTGELAHELGQAAVDLSTIRRKAAKRLAKEVSAELSALAMADAEFTIGVTTELADHGD 416 R L EL AA LS R KAAK L+K V+AEL+ LAM A FTI V A D Sbjct 361 AARVDRLGAELATAATGLSKARAKAAKALSKAVTAELAGLAMDRAAFTISVEPIAARSDD 420 Query 417 PVALALASGELARAGADGVDAVEFGFVAHRGMTVLPLAKSASGGELSRVMLSLEVVLATS 476 L L SG+ AG+ G DAVEFGF AHR +LPLAKSASGGELSRVML+LEVVLA S Sbjct 421 SAPLTLPSGQTVHAGSSGTDAVEFGFAAHRDNPLLPLAKSASGGELSRVMLALEVVLAAS 480 Query 477 RKQAAGTTMVFDEIDAGVGGWAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLMVQR 536 AGTTMVFDE+DAGVGG AAVQIGRRLA+LA THQVIVVTHLPQVAA+AD+HL V R Sbjct 481 ---TAGTTMVFDEVDAGVGGRAAVQIGRRLAKLAHTHQVIVVTHLPQVAAFADIHLTVDR 537 Query 537 TGRDGASGVRRLTSEDRVAELARMLAGLGDSDSGRAHARELLETAQ 582 G SGVRRL EDRVAELARMLAGLGDSD+GRAHARELL+ A+ Sbjct 538 VNSKG-SGVRRLDDEDRVAELARMLAGLGDSDTGRAHARELLDAAR 582 >gi|336441050|gb|AEI54750.1| DNA repair protein RecN [Mycobacterium franklinii] Length=582 Score = 688 bits (1776), Expect = 0.0, Method: Compositional matrix adjust. Identities = 394/588 (68%), Positives = 446/588 (76%), Gaps = 16/588 (2%) Query 1 VLTELRIESLGAISVATAEFDRGFTVLTGETGTGKTMVVTGLHLLGGARADATRVRSGAD 60 +LTE+RIESLGAI ATAEFD G TVLTGETG GKTMVVT LHLLGGARADA RVR+GAD Sbjct 1 MLTEIRIESLGAIPAATAEFDSGLTVLTGETGAGKTMVVTSLHLLGGARADANRVRAGAD 60 Query 61 RAVVEGRFTTTDLDDATVAGLQAVLDSSGAERDEDGSVIALRSISRDGPSRAYLGGRGVP 120 RAVVEGRF T D A + VLDSSGA+RD+DGSVIA RS++ DG S GGR VP Sbjct 61 RAVVEGRFLTADPLGAEPVDVTEVLDSSGAQRDDDGSVIAARSVTSDGRS----GGRSVP 116 Query 121 AKSLSGFTNELLTLHGQNDQLRLMRPDEQRGALDRFAAAGEAVQ----RYRKLRDAWLTA 176 AKSL+ FT LLT+HGQNDQLRLMRP++Q ALDRFA E+++ YRK R+ WLTA Sbjct 117 AKSLASFTAGLLTVHGQNDQLRLMRPEQQLAALDRFAT--ESIEALLTTYRKRREEWLTA 174 Query 177 RRDLVDRRNRARELAQEADRLKFALNEIDTVDPQPGEDVALVADIARLSELDTLREAATT 236 RRDL+DR NRARELAQEADRL FALNEIDTVDP+PGED L ADI RLSELD LR+AA + Sbjct 175 RRDLIDRTNRARELAQEADRLGFALNEIDTVDPKPGEDDQLTADIHRLSELDALRDAAAS 234 Query 237 ARATLCGT-PDADAFDR-GAVDSLGRARAALQSSDDAALRGLAEQVGEALTVVVDAVAEL 294 A L G + +A D A+D + +A+A L ++DDAAL+ LA Q+ EAL VV D EL Sbjct 235 AHGALAGADTEGEAGDSYSAIDRIAKAKALLDATDDAALQALAPQLAEALAVVSDVSREL 294 Query 295 GAYLDELPADASALDAKLARQAQLRTLTRKYAADIDGVLRWADEARARLAQLDVSEEGLA 354 A+ DELP+DAS L+ KLARQ QLRTLTRKYAAD++GV+ WA EAR RLA++D SEE LA Sbjct 295 TAFTDELPSDASTLEEKLARQGQLRTLTRKYAADLNGVIAWAQEARTRLAEVDTSEETLA 354 Query 355 ALERRTGELAHELGQAAVDLSTIRRKAAKRLAKEVSAELSALAMADAEFTIGVTTELADH 414 AL +R LA EL AA L+ R KAAK L K V+AEL+ LAM A FTI V A Sbjct 355 ALSQRVDRLAGELATAATGLTKARTKAAKALGKAVTAELAGLAMDRAAFTIAVEPIPARA 414 Query 415 GDPVALALASGELARAGADGVDAVEFGFVAHRGMTVLPLAKSASGGELSRVMLSLEVVLA 474 D L L SG+ AG+ G DAVEFGF AHR +LPLAKSASGGELSRVML+LEVVLA Sbjct 415 DDSAPLTLPSGQAVHAGSSGTDAVEFGFAAHRDNPMLPLAKSASGGELSRVMLALEVVLA 474 Query 475 TSRKQAAGTTMVFDEIDAGVGGWAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLMV 534 S GTTMVFDE+DAGVGG AAVQIGRRLARLA THQVIVVTHLPQVAA+AD+HL V Sbjct 475 AS---TVGTTMVFDEVDAGVGGRAAVQIGRRLARLAHTHQVIVVTHLPQVAAFADIHLTV 531 Query 535 QRTGRDGASGVRRLTSEDRVAELARMLAGLGDSDSGRAHARELLETAQ 582 R G SGVRRL EDRVAELARMLAGLGDSD+GRAHARELL+ A+ Sbjct 532 DRVSSKG-SGVRRLDDEDRVAELARMLAGLGDSDTGRAHARELLDAAR 578 >gi|169629447|ref|YP_001703096.1| DNA repair protein RecN [Mycobacterium abscessus ATCC 19977] gi|169241414|emb|CAM62442.1| DNA repair protein RecN [Mycobacterium abscessus] gi|336441048|gb|AEI54749.1| DNA repair protein RecN [Mycobacterium abscessus] Length=586 Score = 687 bits (1772), Expect = 0.0, Method: Compositional matrix adjust. Identities = 398/586 (68%), Positives = 451/586 (77%), Gaps = 8/586 (1%) Query 1 VLTELRIESLGAISVATAEFDRGFTVLTGETGTGKTMVVTGLHLLGGARADATRVRSGAD 60 +LTE+RIESLGAI ATAEFD G TVLTGETG GKTMVVT LHLLGGARADA RVR+GAD Sbjct 1 MLTEIRIESLGAIPAATAEFDSGLTVLTGETGAGKTMVVTSLHLLGGARADANRVRAGAD 60 Query 61 RAVVEGRFTTTDLDDATVAGLQAVLDSSGAERDEDGSVIALRSISRDGPSRAYLGGRGVP 120 RAVVEGRF T D A A + VLDSSGA+RD+DGSVIA RS++ DG SRAYLGGR VP Sbjct 61 RAVVEGRFLTADPLGAEPAEVTEVLDSSGAQRDDDGSVIAARSVTSDGRSRAYLGGRSVP 120 Query 121 AKSLSGFTNELLTLHGQNDQLRLMRPDEQRGALDRFAA-AGEAV-QRYRKLRDAWLTARR 178 AKSL+ FT LLT+HGQNDQLRLMRP++Q ALD+FA+ + EA+ YRKLR+ WL ARR Sbjct 121 AKSLASFTAGLLTVHGQNDQLRLMRPEQQLAALDKFASDSIEALLTTYRKLREEWLAARR 180 Query 179 DLVDRRNRARELAQEADRLKFALNEIDTVDPQPGEDVALVADIARLSELDTLREAATTAR 238 DL+DR NR RELAQEADRL FALNEIDTVDP+PGED L ADI RLSELD LR+AA +AR Sbjct 181 DLIDRTNRVRELAQEADRLGFALNEIDTVDPKPGEDDQLTADIHRLSELDALRDAAASAR 240 Query 239 ATLCGT-PDADAFD-RGAVDSLGRARAALQSSDDAALRGLAEQVGEALTVVVDAVAELGA 296 L G D DA D A+D + RA+A ++++DDA LR LA Q+ EAL VV D EL A Sbjct 241 EALAGADADGDAHDSHSAIDRIARAKALVEATDDATLRALAPQLAEALAVVSDVSRELTA 300 Query 297 YLDELPADASALDAKLARQAQLRTLTRKYAADIDGVLRWADEARARLAQLDVSEEGLAAL 356 + DELP+DAS L+ KLARQ QLRTLTRKYAAD++GV+ WA EAR RLA++D SEE L A+ Sbjct 301 FTDELPSDASTLEEKLARQGQLRTLTRKYAADLNGVIAWAKEARTRLAEVDTSEETLNAI 360 Query 357 ERRTGELAHELGQAAVDLSTIRRKAAKRLAKEVSAELSALAMADAEFTIGVTTELADHGD 416 R L EL AA LS R KAAK L+K V+AEL+ LAM A F+IGV A D Sbjct 361 AARVDRLGAELATAATGLSKARAKAAKALSKAVTAELAGLAMDRAAFSIGVEPIAARPDD 420 Query 417 PVALALASGELARAGADGVDAVEFGFVAHRGMTVLPLAKSASGGELSRVMLSLEVVLATS 476 L L SG+ AG+ G D VEFGF AHR +LPLAKSASGGELSRVML+LEVVLA S Sbjct 421 SAPLTLPSGQTVHAGSSGTDVVEFGFAAHRDNPMLPLAKSASGGELSRVMLALEVVLAAS 480 Query 477 RKQAAGTTMVFDEIDAGVGGWAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLMVQR 536 AGTTMVFDE+DAGVGG AAVQIGRRLA+LA THQVIVVTHLPQVAA+AD+HL V R Sbjct 481 ---TAGTTMVFDEVDAGVGGRAAVQIGRRLAKLAHTHQVIVVTHLPQVAAFADIHLTVDR 537 Query 537 TGRDGASGVRRLTSEDRVAELARMLAGLGDSDSGRAHARELLETAQ 582 G SGVRRL EDRVAELARMLAGLGDSD+GRAHARELL+ A+ Sbjct 538 VNSKG-SGVRRLDDEDRVAELARMLAGLGDSDTGRAHARELLDAAR 582 >gi|307084281|ref|ZP_07493394.1| putative DNA repair protein RecN [Mycobacterium tuberculosis SUMu012] gi|308366070|gb|EFP54921.1| putative DNA repair protein RecN [Mycobacterium tuberculosis SUMu012] Length=336 Score = 638 bits (1645), Expect = 0.0, Method: Compositional matrix adjust. Identities = 336/336 (100%), Positives = 336/336 (100%), Gaps = 0/336 (0%) Query 252 RGAVDSLGRARAALQSSDDAALRGLAEQVGEALTVVVDAVAELGAYLDELPADASALDAK 311 RGAVDSLGRARAALQSSDDAALRGLAEQVGEALTVVVDAVAELGAYLDELPADASALDAK Sbjct 1 RGAVDSLGRARAALQSSDDAALRGLAEQVGEALTVVVDAVAELGAYLDELPADASALDAK 60 Query 312 LARQAQLRTLTRKYAADIDGVLRWADEARARLAQLDVSEEGLAALERRTGELAHELGQAA 371 LARQAQLRTLTRKYAADIDGVLRWADEARARLAQLDVSEEGLAALERRTGELAHELGQAA Sbjct 61 LARQAQLRTLTRKYAADIDGVLRWADEARARLAQLDVSEEGLAALERRTGELAHELGQAA 120 Query 372 VDLSTIRRKAAKRLAKEVSAELSALAMADAEFTIGVTTELADHGDPVALALASGELARAG 431 VDLSTIRRKAAKRLAKEVSAELSALAMADAEFTIGVTTELADHGDPVALALASGELARAG Sbjct 121 VDLSTIRRKAAKRLAKEVSAELSALAMADAEFTIGVTTELADHGDPVALALASGELARAG 180 Query 432 ADGVDAVEFGFVAHRGMTVLPLAKSASGGELSRVMLSLEVVLATSRKQAAGTTMVFDEID 491 ADGVDAVEFGFVAHRGMTVLPLAKSASGGELSRVMLSLEVVLATSRKQAAGTTMVFDEID Sbjct 181 ADGVDAVEFGFVAHRGMTVLPLAKSASGGELSRVMLSLEVVLATSRKQAAGTTMVFDEID 240 Query 492 AGVGGWAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLMVQRTGRDGASGVRRLTSE 551 AGVGGWAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLMVQRTGRDGASGVRRLTSE Sbjct 241 AGVGGWAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLMVQRTGRDGASGVRRLTSE 300 Query 552 DRVAELARMLAGLGDSDSGRAHARELLETAQNDELT 587 DRVAELARMLAGLGDSDSGRAHARELLETAQNDELT Sbjct 301 DRVAELARMLAGLGDSDSGRAHARELLETAQNDELT 336 >gi|54023966|ref|YP_118208.1| putative DNA repair protein [Nocardia farcinica IFM 10152] gi|54015474|dbj|BAD56844.1| putative DNA repair protein [Nocardia farcinica IFM 10152] Length=588 Score = 602 bits (1552), Expect = 6e-170, Method: Compositional matrix adjust. Identities = 355/586 (61%), Positives = 428/586 (74%), Gaps = 8/586 (1%) Query 1 VLTELRIESLGAISVATAEFDRGFTVLTGETGTGKTMVVTGLHLLGGARADATRVRSGAD 60 +LTE+RI+SLG IS ATA+F GFTVLTGETG GKTMVVT LHLLGGARADA RVR GA+ Sbjct 1 MLTEIRIDSLGVISAATAQFHEGFTVLTGETGAGKTMVVTSLHLLGGARADAGRVRLGAN 60 Query 61 RAVVEGRFTTTDLDDATVAGLQAVLDSSGAERDEDGSVIALRSISRDGPSRAYLGGRGVP 120 +AVVEGRFT DL++ + VL+S+ AE D+DGSVIA+R++S DG SRA+LGGR VP Sbjct 61 KAVVEGRFTVEDLNEDARGQVAEVLESAAAEADDDGSVIAIRTVSSDGRSRAHLGGRSVP 120 Query 121 AKSLSGFTNELLTLHGQNDQLRLMRPDEQRGALDRFAA--AGEAVQRYRKLRDAWLTARR 178 A L+ FT+ LLT+HGQNDQLRL +P++Q ALDRFAA G +++Y+ LR AWL AR Sbjct 121 ASVLADFTSSLLTVHGQNDQLRLQKPEQQLAALDRFAADTVGPLLRKYQVLRRAWLDART 180 Query 179 DLVDRRNRARELAQEADRLKFALNEIDTVDPQPGEDVALVADIARLSELDTLREAATTAR 238 +L++R R+RELA EADRLK +L+EID V P+PGEDV +V ++ RLS+LD+LREAA A Sbjct 181 ELLERTARSRELALEADRLKHSLDEIDAVAPEPGEDVRIVDEVRRLSDLDSLREAAAVAH 240 Query 239 ATLCGTPDADAFDRGAVDSLGRARAALQSSDDAALRGLAEQVGEALTVVVDAVAELGAYL 298 L G DA GA+D LG ARA L++++D AL LA ++GEA+ VVVD EL YL Sbjct 241 DALAGPADAPEDGSGALDLLGAARARLEAAEDPALSALAPRLGEAIAVVVDLTTELSGYL 300 Query 299 DELPADASALDAKLARQAQLRTLTRKYAADIDGVLRWADEARARLAQLDVSEEGLAALER 358 +LP+D ALD+ L RQA+L++LTRKYA DIDGVL WA EAR RL LDVSEE L L Sbjct 301 SDLPSDPGALDSLLTRQAELKSLTRKYAPDIDGVLAWAAEARTRLGSLDVSEEALTKLAA 360 Query 359 RTGELAHELGQAAVDLSTIRRKAAKRLAKEVSAELSALAMADAEFTIGVTTELADHGDPV 418 A + AAV L+ R KAA +LA VSAEL+ LAM A+ + V A D Sbjct 361 EVDIAAERVRAAAVKLTAARTKAAGKLAAAVSAELAGLAMGKAKLEVQVRAVPAAAQDSA 420 Query 419 ALALASGELARAGADGVDAVEFGFVAHRGMTVLPLAKSASGGELSRVMLSLEVVLATSRK 478 L + EL AGA GVD VEF AH G LPL+KSASGGELSRVML+LEVVLA S Sbjct 421 PLTVDGVEL-HAGATGVDEVEFRLAAHSGAQSLPLSKSASGGELSRVMLALEVVLAGSDH 479 Query 479 QAAGTTMVFDEIDAGVGGWAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLMVQRTG 538 G TMVFDE+DAGVGG AAV+IGRRLARLARTHQVIVVTHLPQVAA+AD HL+V ++ Sbjct 480 ---GATMVFDEVDAGVGGRAAVEIGRRLARLARTHQVIVVTHLPQVAAFADTHLVVDKSD 536 Query 539 RDGA--SGVRRLTSEDRVAELARMLAGLGDSDSGRAHARELLETAQ 582 G SGVR LT ++RV ELARMLAGL D+++GRAHA ELLE A+ Sbjct 537 EGGTVNSGVRALTKDERVVELARMLAGLDDTETGRAHAEELLEMAR 582 >gi|312139855|ref|YP_004007191.1| DNA repair protein recn [Rhodococcus equi 103S] gi|311889194|emb|CBH48508.1| DNA repair protein RecN [Rhodococcus equi 103S] Length=591 Score = 596 bits (1537), Expect = 3e-168, Method: Compositional matrix adjust. Identities = 345/586 (59%), Positives = 415/586 (71%), Gaps = 9/586 (1%) Query 1 VLTELRIESLGAISVATAEFDRGFTVLTGETGTGKTMVVTGLHLLGGARADATRVRSGAD 60 +L+E+RI++LGAIS A+A+F G TVLTGETG GKTMVVT LHLL GARADA RVR GA Sbjct 1 MLSEIRIDNLGAISSASAQFHEGLTVLTGETGAGKTMVVTSLHLLSGARADAGRVRVGAA 60 Query 61 RAVVEGRFTTTDLDDATVAGLQAVLDSSGAERDEDGSVIALRSISRDGPSRAYLGGRGVP 120 RAVVEGRF+ + +L+S GAERDEDGS+IA+R++ DG SRA+LGGR +P Sbjct 61 RAVVEGRFSVDGSSQQIDREVTRLLESCGAERDEDGSIIAVRTVGGDGRSRAHLGGRSIP 120 Query 121 AKSLSGFTNELLTLHGQNDQLRLMRPDEQRGALDRFA--AAGEAVQRYRKLRDAWLTARR 178 A LS FT+ LLT+HGQNDQLRL+RPD+Q ALDRFA G + RY KLR W AR Sbjct 121 AGVLSEFTDPLLTVHGQNDQLRLLRPDQQLAALDRFADKTVGPLLSRYGKLRSEWAEARN 180 Query 179 DLVDRRNRARELAQEADRLKFALNEIDTVDPQPGEDVALVADIARLSELDTLREAATTAR 238 +L++R +R RELAQEAD+L FAL EID + P PGED +V ++ RL +LD+LR AA A+ Sbjct 181 ELLERTSRTRELAQEADQLTFALEEIDRIAPTPGEDREIVDEVRRLGDLDSLRSAAEGAQ 240 Query 239 ATLCGTPDADAFDRGAVDSLGRARAALQSSDDAALRGLAEQVGEALTVVVDAVAELGAYL 298 A L G D GA+D LG AR+ +++SDD AL GL ++GEA+ VV D EL YL Sbjct 241 AALAGVEDVMDGGTGALDLLGEARSRIEASDDPALAGLGPRLGEAMAVVADVAGELSGYL 300 Query 299 DELPADASALDAKLARQAQLRTLTRKYAADIDGVLRWADEARARLAQLDVSEEGLAALER 358 LP+D ALD L RQA+L+TLTRKYAADIDGVL WA+ AR RLA++DVS + LA L Sbjct 301 SGLPSDPGALDTLLTRQAELKTLTRKYAADIDGVLEWAESARDRLARIDVSADALAELSE 360 Query 359 RTGELAHELGQAAVDLSTIRRKAAKRLAKEVSAELSALAMADAEFTIGVTTELADHGDPV 418 R + A ++AV L+ R KAA +LAK VS EL+ LAM A + V A D Sbjct 361 RVEKTAAATAESAVKLTAARTKAAVKLAKAVSNELAGLAMGRAALEVSVRAREAGPADSA 420 Query 419 ALALASGELARAGADGVDAVEFGFVAHRGMTVLPLAKSASGGELSRVMLSLEVVLATSRK 478 L L G AG GVD VEF AH G LP++KSASGGELSRVML+LEVVLA S + Sbjct 421 PL-LVDGRELHAGVSGVDEVEFRLAAHSGAQSLPISKSASGGELSRVMLALEVVLAGSDR 479 Query 479 QAAGTTMVFDEIDAGVGGWAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLMVQRTG 538 G TMVFDE+DAGVGG AAV+IGRRLARLARTHQVIVVTHLPQVAA+AD HL+V +T Sbjct 480 ---GATMVFDEVDAGVGGRAAVEIGRRLARLARTHQVIVVTHLPQVAAFADTHLVVDKTD 536 Query 539 --RDGA-SGVRRLTSEDRVAELARMLAGLGDSDSGRAHARELLETA 581 R G SGVR LT ++RV ELARMLAGL D+++GRAHA ELL A Sbjct 537 DVRSGVDSGVRTLTEDERVVELARMLAGLDDTETGRAHAEELLTIA 582 >gi|229494835|ref|ZP_04388589.1| DNA repair protein RecN [Rhodococcus erythropolis SK121] gi|229318273|gb|EEN84140.1| DNA repair protein RecN [Rhodococcus erythropolis SK121] Length=592 Score = 595 bits (1534), Expect = 7e-168, Method: Compositional matrix adjust. Identities = 352/590 (60%), Positives = 430/590 (73%), Gaps = 12/590 (2%) Query 1 VLTELRIESLGAISVATAEFDRGFTVLTGETGTGKTMVVTGLHLLGGARADATRVRSGAD 60 +L E+RI+SLG IS A+A+F G TVLTGETG GKTMVVT LHLL GARADA RVR GA Sbjct 1 MLAEIRIDSLGVISEASAQFHEGLTVLTGETGAGKTMVVTSLHLLSGARADAGRVRLGAS 60 Query 61 RAVVEGRFTTTDLDDATVAGLQAVLDSSGAERDEDGSVIALRSISRDGPSRAYLGGRGVP 120 RAVVEGRF D+ AT + +L+SSGAERDEDG++IA+R++ DG SRA+LGGR VP Sbjct 61 RAVVEGRFIADDVSPATEREIVRILESSGAERDEDGTIIAVRTVGSDGRSRAHLGGRSVP 120 Query 121 AKSLSGFTNELLTLHGQNDQLRLMRPDEQRGALDRFA--AAGEAVQRYRKLRDAWLTARR 178 A LS FT+ LLT+HGQNDQLRL+RPD+QR ALDRF A G + RYRK R WL AR Sbjct 121 AGVLSEFTDPLLTVHGQNDQLRLLRPDQQRNALDRFGDKAIGTLLTRYRKHRREWLDARS 180 Query 179 DLVDRRNRARELAQEADRLKFALNEIDTVDPQPGEDVALVADIARLSELDTLREAATTAR 238 +L++R ++ARELAQEAD+L FALNEID V P+PGED A+VA++ RLSELD+LR AA A Sbjct 181 ELIERTSKARELAQEADQLTFALNEIDGVAPEPGEDTAIVAEVRRLSELDSLRSAAEEAH 240 Query 239 ATLCGTPDADAFDRG---AVDSLGRARAALQSSDDAALRGLAEQVGEALTVVVDAVAELG 295 A L G+ D + D G A+D + ARA ++S DA L GL ++ +A+ VV D +L Sbjct 241 AALAGSDDMASGDVGVMPALDLMSEARARIESVTDADLDGLGSRLADAIAVVTDVAGDLN 300 Query 296 AYLDELPADASALDAKLARQAQLRTLTRKYAADIDGVLRWADEARARLAQLDVSEEGLAA 355 YL LPAD ALD+ L+RQ++L+TLTRKYAAD+DGVL WAD ARARL++LDVS + L+ Sbjct 301 TYLSGLPADPGALDSLLSRQSELKTLTRKYAADVDGVLEWADTARARLSKLDVSSDALSL 360 Query 356 LERRTGELAHELGQAAVDLSTIRRKAAKRLAKEVSAELSALAMADAEFTIGVTTELADHG 415 L ++ E A +AA LS R KAA +LAK VSAEL+ LAM A + V ++ A Sbjct 361 LAKQVEETAGLTAEAATKLSAARVKAAAKLAKAVSAELAGLAMGRAGLEVTVRSQPAGPQ 420 Query 416 DPVALALASGELARAGADGVDAVEFGFVAHRGMTVLPLAKSASGGELSRVMLSLEVVLAT 475 D L++ +L AG+ GVD VEF AH G LP++KSASGGELSRVML+LEVVLA Sbjct 421 DSAPLSVGGVDL-HAGSAGVDEVEFRLSAHSGAPSLPISKSASGGELSRVMLALEVVLAG 479 Query 476 SRKQAAGTTMVFDEIDAGVGGWAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLMVQ 535 S G TMVFDE+DAGVGG AAV+IGRRLA+LARTHQVIVVTHLPQVAA+AD HL+V Sbjct 480 SDT---GATMVFDEVDAGVGGRAAVEIGRRLAKLARTHQVIVVTHLPQVAAFADTHLVVD 536 Query 536 RTGRDG---ASGVRRLTSEDRVAELARMLAGLGDSDSGRAHARELLETAQ 582 + G +SGVR L+ DRV ELARMLAGL D+++GRAHA ELLE A Sbjct 537 KVDDKGGVVSSGVRTLSDSDRVVELARMLAGLDDTETGRAHAEELLEIAN 586 >gi|226306752|ref|YP_002766712.1| DNA repair protein RecN [Rhodococcus erythropolis PR4] gi|226185869|dbj|BAH33973.1| DNA repair protein RecN [Rhodococcus erythropolis PR4] Length=592 Score = 595 bits (1533), Expect = 8e-168, Method: Compositional matrix adjust. Identities = 352/590 (60%), Positives = 429/590 (73%), Gaps = 12/590 (2%) Query 1 VLTELRIESLGAISVATAEFDRGFTVLTGETGTGKTMVVTGLHLLGGARADATRVRSGAD 60 +L E+RI+SLG IS A+A+F G TVLTGETG GKTMVVT LHLL GARADA RVR GA Sbjct 1 MLAEIRIDSLGVISEASAQFHEGLTVLTGETGAGKTMVVTSLHLLSGARADAGRVRLGAS 60 Query 61 RAVVEGRFTTTDLDDATVAGLQAVLDSSGAERDEDGSVIALRSISRDGPSRAYLGGRGVP 120 RAVVEGRF D+ AT + +L+SSGAERDEDG++IA+R++ DG SRA+LGGR VP Sbjct 61 RAVVEGRFIADDVSPATEREIVRILESSGAERDEDGTIIAVRTVGSDGRSRAHLGGRSVP 120 Query 121 AKSLSGFTNELLTLHGQNDQLRLMRPDEQRGALDRFA--AAGEAVQRYRKLRDAWLTARR 178 A LS FT+ LLT+HGQNDQLRL+RPD+QR ALDRF A G + RYRK R WL AR Sbjct 121 AGVLSEFTDPLLTVHGQNDQLRLLRPDQQRNALDRFGDKAIGTLLTRYRKHRREWLDARS 180 Query 179 DLVDRRNRARELAQEADRLKFALNEIDTVDPQPGEDVALVADIARLSELDTLREAATTAR 238 +L++R ++ARELAQEAD+L FALNEID V P+PGED A+VA++ RLSELD+LR AA A Sbjct 181 ELIERTSKARELAQEADQLTFALNEIDGVAPEPGEDTAIVAEVRRLSELDSLRSAAEEAH 240 Query 239 ATLCGTPDADAFDRG---AVDSLGRARAALQSSDDAALRGLAEQVGEALTVVVDAVAELG 295 A L G D + D G A+D + ARA ++S DA L GL ++ +A+ VV D +L Sbjct 241 AALAGNDDMASGDVGVMPALDLMSEARARIESVTDADLDGLGSRLADAIAVVTDVAGDLN 300 Query 296 AYLDELPADASALDAKLARQAQLRTLTRKYAADIDGVLRWADEARARLAQLDVSEEGLAA 355 YL LPAD ALD+ L+RQ++L+TLTRKYAAD+DGVL WAD ARARL++LDVS + L+ Sbjct 301 TYLSGLPADPGALDSLLSRQSELKTLTRKYAADVDGVLEWADTARARLSKLDVSSDALSL 360 Query 356 LERRTGELAHELGQAAVDLSTIRRKAAKRLAKEVSAELSALAMADAEFTIGVTTELADHG 415 L ++ E A +AA LS R KAA +LAK VSAEL+ LAM A + V ++ A Sbjct 361 LAKQVEETAGLTAEAATKLSAARVKAAAKLAKAVSAELAGLAMGRAGLEVTVRSQPAGPQ 420 Query 416 DPVALALASGELARAGADGVDAVEFGFVAHRGMTVLPLAKSASGGELSRVMLSLEVVLAT 475 D L++ +L AG+ GVD VEF AH G LP++KSASGGELSRVML+LEVVLA Sbjct 421 DSAPLSVGGVDL-HAGSAGVDEVEFRLSAHIGAPSLPISKSASGGELSRVMLALEVVLAG 479 Query 476 SRKQAAGTTMVFDEIDAGVGGWAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLMVQ 535 S G TMVFDE+DAGVGG AAV+IGRRLA+LARTHQVIVVTHLPQVAA+AD HL+V Sbjct 480 SDT---GATMVFDEVDAGVGGRAAVEIGRRLAKLARTHQVIVVTHLPQVAAFADTHLVVD 536 Query 536 RTGRDG---ASGVRRLTSEDRVAELARMLAGLGDSDSGRAHARELLETAQ 582 + G +SGVR L+ DRV ELARMLAGL D+++GRAHA ELLE A Sbjct 537 KVDDKGGVVSSGVRTLSDSDRVVELARMLAGLDDTETGRAHAEELLEIAN 586 >gi|307084280|ref|ZP_07493393.1| putative DNA repair protein RecN [Mycobacterium tuberculosis SUMu012] gi|308366101|gb|EFP54952.1| putative DNA repair protein RecN [Mycobacterium tuberculosis SUMu012] Length=315 Score = 593 bits (1530), Expect = 2e-167, Method: Compositional matrix adjust. Identities = 306/308 (99%), Positives = 308/308 (100%), Gaps = 0/308 (0%) Query 1 VLTELRIESLGAISVATAEFDRGFTVLTGETGTGKTMVVTGLHLLGGARADATRVRSGAD 60 +LTELRIESLGAISVATAEFDRGFTVLTGETGTGKTMVVTGLHLLGGARADATRVRSGAD Sbjct 1 MLTELRIESLGAISVATAEFDRGFTVLTGETGTGKTMVVTGLHLLGGARADATRVRSGAD 60 Query 61 RAVVEGRFTTTDLDDATVAGLQAVLDSSGAERDEDGSVIALRSISRDGPSRAYLGGRGVP 120 RAVVEGRFTTTDLDDATVAGLQAVLDSSGAERDEDGSVIALRSISRDGPSRAYLGGRGVP Sbjct 61 RAVVEGRFTTTDLDDATVAGLQAVLDSSGAERDEDGSVIALRSISRDGPSRAYLGGRGVP 120 Query 121 AKSLSGFTNELLTLHGQNDQLRLMRPDEQRGALDRFAAAGEAVQRYRKLRDAWLTARRDL 180 AKSLSGFTNELLTLHGQNDQLRLMRPDEQRGALDRFAAAGEAVQRYRKLRDAWLTARRDL Sbjct 121 AKSLSGFTNELLTLHGQNDQLRLMRPDEQRGALDRFAAAGEAVQRYRKLRDAWLTARRDL 180 Query 181 VDRRNRARELAQEADRLKFALNEIDTVDPQPGEDVALVADIARLSELDTLREAATTARAT 240 VDRRNRARELAQEADRLKFALNEIDTVDPQPGEDVALVADIARLSELDTLREAATTARAT Sbjct 181 VDRRNRARELAQEADRLKFALNEIDTVDPQPGEDVALVADIARLSELDTLREAATTARAT 240 Query 241 LCGTPDADAFDRGAVDSLGRARAALQSSDDAALRGLAEQVGEALTVVVDAVAELGAYLDE 300 LCGTPDADAFDRGAVDSLGRARAALQSSDDAALRGLAEQVGEALTVVVDAVAELGAYLDE Sbjct 241 LCGTPDADAFDRGAVDSLGRARAALQSSDDAALRGLAEQVGEALTVVVDAVAELGAYLDE 300 Query 301 LPADASAL 308 LPADASA+ Sbjct 301 LPADASAI 308 >gi|325674268|ref|ZP_08153957.1| DNA repair protein RecN [Rhodococcus equi ATCC 33707] gi|325554948|gb|EGD24621.1| DNA repair protein RecN [Rhodococcus equi ATCC 33707] Length=599 Score = 592 bits (1526), Expect = 7e-167, Method: Compositional matrix adjust. Identities = 346/586 (60%), Positives = 416/586 (71%), Gaps = 9/586 (1%) Query 1 VLTELRIESLGAISVATAEFDRGFTVLTGETGTGKTMVVTGLHLLGGARADATRVRSGAD 60 VL+E+RI++LGAIS A+A+F G TVLTGETG GKTMVVT LHLL GARADA RVR GA Sbjct 9 VLSEIRIDNLGAISSASAQFHEGLTVLTGETGAGKTMVVTSLHLLSGARADAGRVRVGAA 68 Query 61 RAVVEGRFTTTDLDDATVAGLQAVLDSSGAERDEDGSVIALRSISRDGPSRAYLGGRGVP 120 RAVVEGRF+ + +L+S GAERDEDGS+IA+R++ DG SRA+LGGR +P Sbjct 69 RAVVEGRFSVDGSSQQIDREVTRLLESCGAERDEDGSIIAVRTVGGDGRSRAHLGGRSIP 128 Query 121 AKSLSGFTNELLTLHGQNDQLRLMRPDEQRGALDRFA--AAGEAVQRYRKLRDAWLTARR 178 A LS FT+ LLT+HGQNDQLRL+RPD+Q ALDRFA G + RY KLR W+ AR Sbjct 129 AGVLSEFTDPLLTVHGQNDQLRLLRPDQQLAALDRFADKTVGPLLARYGKLRSEWVEARN 188 Query 179 DLVDRRNRARELAQEADRLKFALNEIDTVDPQPGEDVALVADIARLSELDTLREAATTAR 238 +L++R +R RELAQEAD+L FAL EID + P PGED +V ++ RL +LD+LR AA A+ Sbjct 189 ELLERTSRTRELAQEADQLTFALEEIDRIAPTPGEDREIVDEVRRLGDLDSLRSAAEGAQ 248 Query 239 ATLCGTPDADAFDRGAVDSLGRARAALQSSDDAALRGLAEQVGEALTVVVDAVAELGAYL 298 A L G D GA+D +G AR+ +++SDD AL GL ++GEA+ VV D EL YL Sbjct 249 AALAGVEDVMDGGTGALDLIGEARSRIEASDDPALAGLGPRLGEAMAVVADVAGELSGYL 308 Query 299 DELPADASALDAKLARQAQLRTLTRKYAADIDGVLRWADEARARLAQLDVSEEGLAALER 358 LP+D ALD L RQA+L+TLTRKYAADIDGVL WA+ AR RLA++DVS + LA L Sbjct 309 SGLPSDPGALDTLLTRQAELKTLTRKYAADIDGVLEWAETARDRLARIDVSADALAELSE 368 Query 359 RTGELAHELGQAAVDLSTIRRKAAKRLAKEVSAELSALAMADAEFTIGVTTELADHGDPV 418 R + A +AAV L+ R KAA +LAK VS EL+ LAM A + V A D Sbjct 369 RVEKTAAATAEAAVKLTAARTKAAVKLAKAVSNELAGLAMGRAALEVSVRAREAGPADSA 428 Query 419 ALALASGELARAGADGVDAVEFGFVAHRGMTVLPLAKSASGGELSRVMLSLEVVLATSRK 478 L L G AG GVD VEF AH G LP++KSASGGELSRVML+LEVVLA S + Sbjct 429 PL-LVDGRELHAGVSGVDEVEFRLAAHSGAQSLPISKSASGGELSRVMLALEVVLAGSDR 487 Query 479 QAAGTTMVFDEIDAGVGGWAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLMVQRTG 538 G TMVFDE+DAGVGG AAV+IGRRLARLARTHQVIVVTHLPQVAA+AD HL+V +T Sbjct 488 ---GATMVFDEVDAGVGGRAAVEIGRRLARLARTHQVIVVTHLPQVAAFADTHLVVDKTD 544 Query 539 --RDGA-SGVRRLTSEDRVAELARMLAGLGDSDSGRAHARELLETA 581 R G SGVR LT ++RV ELARMLAGL D+++GRAHA ELL A Sbjct 545 DVRSGVDSGVRTLTEDERVVELARMLAGLDDTETGRAHAEELLTIA 590 >gi|226360081|ref|YP_002777859.1| DNA repair protein RecN [Rhodococcus opacus B4] gi|226238566|dbj|BAH48914.1| DNA repair protein RecN [Rhodococcus opacus B4] Length=590 Score = 589 bits (1518), Expect = 5e-166, Method: Compositional matrix adjust. Identities = 346/588 (59%), Positives = 423/588 (72%), Gaps = 11/588 (1%) Query 1 VLTELRIESLGAISVATAEFDRGFTVLTGETGTGKTMVVTGLHLLGGARADATRVRSGAD 60 +L E+RI++LG IS A+A+F G TVLTGETG GKTMVVT LHLL GARADA RVR GA Sbjct 1 MLAEIRIDNLGVISEASAQFHEGLTVLTGETGAGKTMVVTSLHLLSGARADAGRVRLGAP 60 Query 61 RAVVEGRFTTTDLDDATVAGLQAVLDSSGAERDEDGSVIALRSISRDGPSRAYLGGRGVP 120 RAVVEGRF T + + + +L+S+GAERDEDG++IA+R++ DG SRA+LGGR VP Sbjct 61 RAVVEGRFMTDEGSEHVERAVSRLLESTGAERDEDGTIIAVRTVGSDGRSRAHLGGRSVP 120 Query 121 AKSLSGFTNELLTLHGQNDQLRLMRPDEQRGALDRFA--AAGEAVQRYRKLRDAWLTARR 178 A LS FT+ LLT+HGQNDQLRL+RPD+Q ALDRFA G V RYRK R+ W+TAR Sbjct 121 AGVLSEFTDPLLTVHGQNDQLRLLRPDQQCAALDRFADKTVGPLVARYRKHRNEWMTARS 180 Query 179 DLVDRRNRARELAQEADRLKFALNEIDTVDPQPGEDVALVADIARLSELDTLREAATTAR 238 +L++R R RELAQEAD+L FALNEID V P PGED A+V+++ RLSELD+LR AA A Sbjct 181 ELIERTGRTRELAQEADQLTFALNEIDGVAPTPGEDEAIVSEVRRLSELDSLRSAAEEAH 240 Query 239 ATLCGTPDADAFDRG--AVDSLGRARAALQSSDDAALRGLAEQVGEALTVVVDAVAELGA 296 A L G D A+D L ARA ++S+ D L GL ++ +A+ VV D A+L Sbjct 241 AALAGGDVMDGDGGAAPALDLLSEARARIESATDPELDGLGPRLADAIAVVTDVSADLTT 300 Query 297 YLDELPADASALDAKLARQAQLRTLTRKYAADIDGVLRWADEARARLAQLDVSEEGLAAL 356 YL LPAD ALD+ L+RQA+L+ L RKYAAD+DGVL WAD ARARL ++DVS + LAAL Sbjct 301 YLAGLPADPGALDSLLSRQAELKNLIRKYAADVDGVLEWADNARARLEKIDVSSDALAAL 360 Query 357 ERRTGELAHELGQAAVDLSTIRRKAAKRLAKEVSAELSALAMADAEFTIGVTTELADHGD 416 ++ E A +AA L+ R KAA +LAK VS+EL+ LAM A + V +A D Sbjct 361 TKQVEESAASTAEAASKLTAARVKAATKLAKAVSSELAGLAMGRAALEVTVRPRIAGPQD 420 Query 417 PVALALASGELARAGADGVDAVEFGFVAHRGMTVLPLAKSASGGELSRVMLSLEVVLATS 476 L + EL AG+ GVD VEF AH G LP++KSASGGELSRVML+LEVVLA S Sbjct 421 TAPLTVDGTEL-HAGSSGVDEVEFRLSAHSGAQSLPISKSASGGELSRVMLALEVVLAGS 479 Query 477 RKQAAGTTMVFDEIDAGVGGWAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLMVQR 536 +G TMVFDE+DAGVGG AAV+IGRRLARLARTHQVIVVTHLPQVAA+AD HL+V + Sbjct 480 D---SGATMVFDEVDAGVGGRAAVEIGRRLARLARTHQVIVVTHLPQVAAFADTHLVVDK 536 Query 537 T-GRDG--ASGVRRLTSEDRVAELARMLAGLGDSDSGRAHARELLETA 581 +DG +SGV LT ++RV ELARMLAGL D+++GRAHA ELL TA Sbjct 537 VDDQDGVVSSGVHTLTDDERVVELARMLAGLDDTETGRAHAEELLATA 584 >gi|333919196|ref|YP_004492777.1| DNA repair protein RecN [Amycolicicoccus subflavus DQS3-9A1] gi|333481417|gb|AEF39977.1| DNA repair protein RecN [Amycolicicoccus subflavus DQS3-9A1] Length=595 Score = 573 bits (1478), Expect = 2e-161, Method: Compositional matrix adjust. Identities = 341/595 (58%), Positives = 413/595 (70%), Gaps = 17/595 (2%) Query 1 VLTELRIESLGAISVATAEFDRGFTVLTGETGTGKTMVVTGLHLLGGARADATRVRSGAD 60 +L ELRI LG I A+AE D GFTVLTGETG GKTMVVT LHLL GARADA RVR+GA+ Sbjct 1 MLAELRINGLGVIDAASAELDPGFTVLTGETGAGKTMVVTSLHLLSGARADAKRVRAGAE 60 Query 61 RAVVEGRFTTTDLDDATVAGLQAVLDSSGAERDEDGSVIALRSISRDGPSRAYLGGRGVP 120 RA VEGRFT + + +L+SSGAE D DGSVIA+R++SRDG SRA+LGGR VP Sbjct 61 RATVEGRFTIDGVAKTVREEIAEILESSGAEEDSDGSVIAVRTVSRDGRSRAHLGGRSVP 120 Query 121 AKSLSGFTNELLTLHGQNDQLRLMRPDEQRGALDRFAAAGEAV----QRYRKLRDAWLTA 176 A L FT LLT+HGQNDQLRL++ D+QRGALDRF AGEA+ RYR R W Sbjct 121 AGVLGRFTGALLTVHGQNDQLRLLKADQQRGALDRF--AGEAITPLLDRYRSARAEWKRL 178 Query 177 RRDLVDRRNRARELAQEADRLKFALNEIDTVDPQPGEDVALVADIARLSELDTLREAATT 236 ++L +R R+RELAQEADRL+F LNEID VDPQPGED ++ A++ RL +LD+LR AAT Sbjct 179 TKELHERTTRSRELAQEADRLQFGLNEIDAVDPQPGEDESIAAEVRRLGDLDSLRGAATE 238 Query 237 ARATLCGTPD-ADAFD---RGAVDSLGRARAALQSSDDAALRGLAEQVGEALTVVVDAVA 292 A A + G D AD D A++ LG+AR +L+ +DD +L LA + +A+ +V D A Sbjct 239 ALAAIAGASDIADTTDTSAENALELLGKARHSLEGADDPSLGELAPRFRDAIALVGDLGA 298 Query 293 ELGAYLDELPADASALDAKLARQAQLRTLTRKYAADIDGVLRWADEARARLAQLDVSEEG 352 EL +YL+ LP+D ALD L RQ+ L+ LTRKYAAD+DGVL WA AR RLA +DVS E Sbjct 299 ELSSYLEGLPSDPGALDGLLNRQSDLKMLTRKYAADVDGVLEWARSARERLASIDVSAEA 358 Query 353 LAALERRTGELAHELGQAAVDLSTIRRKAAKRLAKEVSAELSALAMADAEFTIGVTTELA 412 L+ L EL A+ LS RR+AA L+K VS EL+ LAM A+ + V T Sbjct 359 LSELSAAVAAAGRELAGHAIKLSAARRRAAVALSKAVSTELAGLAMGRAKLEVSVDTTAV 418 Query 413 DHGDPVALALASGELARAGADGVDAVEFGFVAHRGMTVLPLAKSASGGELSRVMLSLEVV 472 + A+ + G G+D VEF AH G +PLAKSASGGELSRVML+LEVV Sbjct 419 EAKTDGAIEVEKSWYV-PGPYGIDEVEFRLAAHPGAEPMPLAKSASGGELSRVMLALEVV 477 Query 473 LATSRKQAAGTTMVFDEIDAGVGGWAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHL 532 LA A +MVFDE+DAGVGG AA++IGRRLARLARTHQVIVVTHLPQVAA+AD HL Sbjct 478 LAGGDSAA---SMVFDEVDAGVGGRAAIEIGRRLARLARTHQVIVVTHLPQVAAFADTHL 534 Query 533 MVQRTGRDGA---SGVRRLTSEDRVAELARMLAGLGDSDSGRAHARELLETAQND 584 +V +T + G SGVR L EDRVAELARMLAG+GDSD+GRAHA ELL A+ + Sbjct 535 VVDKTDQPGGTIVSGVRNLGPEDRVAELARMLAGMGDSDTGRAHAEELLAVAEQE 589 >gi|111017951|ref|YP_700923.1| DNA repair protein RecN [Rhodococcus jostii RHA1] gi|110817481|gb|ABG92765.1| DNA repair protein RecN [Rhodococcus jostii RHA1] Length=590 Score = 571 bits (1471), Expect = 2e-160, Method: Compositional matrix adjust. Identities = 345/589 (59%), Positives = 423/589 (72%), Gaps = 11/589 (1%) Query 1 VLTELRIESLGAISVATAEFDRGFTVLTGETGTGKTMVVTGLHLLGGARADATRVRSGAD 60 +L E+RI++LG IS A+A+F G TVLTGETG GKTMVVT LHLL GARADA RVR GA Sbjct 1 MLAEIRIDNLGVISEASAQFHEGLTVLTGETGAGKTMVVTSLHLLSGARADAGRVRLGAP 60 Query 61 RAVVEGRFTTTDLDDATVAGLQAVLDSSGAERDEDGSVIALRSISRDGPSRAYLGGRGVP 120 RAVVEGRF T + + + +L+S+GAERDEDG++IA+R++ DG SRA+LGGR VP Sbjct 61 RAVVEGRFLTDEGSEHVERAVSRLLESTGAERDEDGTIIAVRTVGSDGRSRAHLGGRSVP 120 Query 121 AKSLSGFTNELLTLHGQNDQLRLMRPDEQRGALDRFA--AAGEAVQRYRKLRDAWLTARR 178 A LS FT+ LLT+HGQNDQLRL+RPD+Q ALDRFA G + RYRK RD W+TAR Sbjct 121 AGVLSEFTDPLLTVHGQNDQLRLLRPDQQCAALDRFADKTVGPLLARYRKHRDEWVTART 180 Query 179 DLVDRRNRARELAQEADRLKFALNEIDTVDPQPGEDVALVADIARLSELDTLREAATTAR 238 +L++R R RELAQEAD+L FALNEID V P PGED ++V+++ RLSELD+LR AA A Sbjct 181 ELIERTGRTRELAQEADQLTFALNEIDGVAPTPGEDESIVSEVRRLSELDSLRSAAEEAH 240 Query 239 ATLCGTPDADAFDR--GAVDSLGRARAALQSSDDAALRGLAEQVGEALTVVVDAVAELGA 296 A L G D D A+D L ARA ++S+ D L GL ++ +A+ V+ D A+L Sbjct 241 AALAGGDDMDGDGVGAPALDLLSEARARIESATDPELDGLGSRLADAIAVITDVSADLTT 300 Query 297 YLDELPADASALDAKLARQAQLRTLTRKYAADIDGVLRWADEARARLAQLDVSEEGLAAL 356 YL LPAD ALD+ L+RQA+L+ LTRKYAAD+DGVL WA ARARL ++DVS + LAAL Sbjct 301 YLAGLPADPGALDSLLSRQAELKNLTRKYAADVDGVLEWAGNARARLEKIDVSSDALAAL 360 Query 357 ERRTGELAHELGQAAVDLSTIRRKAAKRLAKEVSAELSALAMADAEFTIGVTTELADHGD 416 ++ E A +AA L+ R KAA +LAK VS+EL+ LAM A + V +A D Sbjct 361 TKQVEESAASTAEAASKLTAARVKAAAKLAKAVSSELAGLAMGRAALEVSVRPRIAGPQD 420 Query 417 PVALALASGELARAGADGVDAVEFGFVAHRGMTVLPLAKSASGGELSRVMLSLEVVLATS 476 L + EL AG+ GVD VEF AH G LP++KSASGGELSRVML+LEVVLA S Sbjct 421 TAPLTIDGTEL-HAGSSGVDEVEFRLSAHSGAQSLPISKSASGGELSRVMLALEVVLAGS 479 Query 477 RKQAAGTTMVFDEIDAGVGGWAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLMVQR 536 +G TMVFDE+DAGVGG AAV+IGRRLARLARTHQVIVVTHLPQVAA+AD HL+V + Sbjct 480 D---SGATMVFDEVDAGVGGRAAVEIGRRLARLARTHQVIVVTHLPQVAAFADTHLVVDK 536 Query 537 TGR-DG--ASGVRRLTSEDRVAELARMLAGLGDSDSGRAHARELLETAQ 582 DG +SGV LT ++RV ELARMLAGL D+++GRAHA ELL TA Sbjct 537 VDDADGVVSSGVHTLTDDERVVELARMLAGLDDTETGRAHAEELLATAN 585 >gi|296140083|ref|YP_003647326.1| DNA repair protein RecN [Tsukamurella paurometabola DSM 20162] gi|296028217|gb|ADG78987.1| DNA repair protein RecN [Tsukamurella paurometabola DSM 20162] Length=590 Score = 561 bits (1446), Expect = 1e-157, Method: Compositional matrix adjust. Identities = 340/592 (58%), Positives = 410/592 (70%), Gaps = 17/592 (2%) Query 1 VLTELRIESLGAISVATAEFDRGFTVLTGETGTGKTMVVTGLHLLGGARADATRVRSGAD 60 +L E+RI+SLG I A AEF G TVLTGETG GKTMVVT LHLL GARAD R+R+GAD Sbjct 1 MLEEIRIDSLGVIEQAAAEFAEGLTVLTGETGAGKTMVVTSLHLLAGARADPGRIRAGAD 60 Query 61 RAVVEGRFTTTDLDDATVAGLQAVLDSSGAERDEDGSVIALRSISRDGPSRAYLGGRGVP 120 +AVVEGRF+ L A+ A + +D +VIA+RS++ DG SRAYLGGR VP Sbjct 61 KAVVEGRFS---LAGASSADQVREVVDGAGGDLDDDAVIAVRSVAADGRSRAYLGGRSVP 117 Query 121 AKSLSGFTNELLTLHGQNDQLRLMRPDEQRGALDRFAAAG--EAVQRYRKLRDAWLTARR 178 +L F LLT+HGQNDQLRL+RP+ QR LD FA A +A+ Y+ +RD WL AR Sbjct 118 VGTLGEFAGPLLTVHGQNDQLRLLRPERQRDLLDAFAGAPALKALATYQAVRDEWLAARA 177 Query 179 DLVDRRNRARELAQEADRLKFALNEIDTVDPQPGEDVALVADIARLSELDTLREAATTAR 238 +L DR R+REL E D L AL EID ++P PGEDV +A I RLS+LD+LREAA T+ Sbjct 178 ELADRTTRSRELVLEQDHLTSALAEIDGLEPLPGEDVETIAKIKRLSDLDSLREAADTSY 237 Query 239 ATLCG-TPDADAFDRGAV-DSLGRARAALQSSDDAALRGLAEQVGEALTVVVDAVAELGA 296 A L G + AD G+V D LG RAAL SDDAALRGL+E+V EA TV D EL + Sbjct 238 AALTGASYGADGEGVGSVLDLLGTVRAALAGSDDAALRGLSERVDEAATVAGDIATELSS 297 Query 297 YLDELPADASALDAKLARQAQLRTLTRKYAADIDGVLRWADEARARLAQLDVSEEGLAAL 356 YL +LP+D S L++ L RQ++L+TLTRKYA DIDGV+ WAD+AR RLA +D S EGLAAL Sbjct 298 YLADLPSDPSELESLLLRQSELKTLTRKYAPDIDGVIAWADDARERLAGIDTSAEGLAAL 357 Query 357 ERRTGELAHELGQAAVDLSTIRRKAAKRLAKEVSAELSALAMADAEFTIGVTTELADHGD 416 + R EL L AA L+ R KAA L K+V+ EL LAM A T+ V +L + G Sbjct 358 QGRVTELETALIGAAAALTAARVKAAGTLGKKVTGELRKLAMGGASITVDVAPDLDESGI 417 Query 417 PVALALASGELARAGADGVDAVEFGFVAHRGMTVLPLAKSASGGELSRVMLSLEVVLATS 476 V G RAGA G DAVEF VAH G LP+ KSASGGELSRVML+LEVVLA + Sbjct 418 VV-----DGVARRAGAHGTDAVEFRLVAHDGANPLPIGKSASGGELSRVMLALEVVLAAT 472 Query 477 RKQAAGTTMVFDEIDAGVGGWAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLMV-- 534 + G TMVFDE+DAGVGG AAV+IGRRLA LA+ HQVIVVTHLPQVAA+AD HL V Sbjct 473 EQ---GLTMVFDEVDAGVGGKAAVEIGRRLAALAQRHQVIVVTHLPQVAAFADTHLTVGK 529 Query 535 QRTGRDGASGVRRLTSEDRVAELARMLAGLGDSDSGRAHARELLETAQNDEL 586 Q + S + L+ E+R+AELARMLAGLGDSD+GRAHA ELLE A++D++ Sbjct 530 QTAKKSVTSTLTALSREERIAELARMLAGLGDSDTGRAHAEELLEAAESDKV 581 >gi|257056534|ref|YP_003134366.1| DNA replication and repair protein RecN [Saccharomonospora viridis DSM 43017] gi|256586406|gb|ACU97539.1| DNA replication and repair protein RecN [Saccharomonospora viridis DSM 43017] Length=593 Score = 557 bits (1435), Expect = 2e-156, Method: Compositional matrix adjust. Identities = 328/591 (56%), Positives = 402/591 (69%), Gaps = 21/591 (3%) Query 1 VLTELRIESLGAISVATAEFDRGFTVLTGETGTGKTMVVTGLHLLGGARADATRVRSGAD 60 +L E+RI+ LG I A E GFTV+TGETG GKTMVVTGLHLL G R+DA++VR+G+ Sbjct 1 MLAEMRIQGLGVIDEAVLELHPGFTVVTGETGAGKTMVVTGLHLLSGGRSDASKVRAGSA 60 Query 61 RAVVEGRFTTTDLDDATVAGLQA--VLDSSGAERDEDGSVIALRSISRDGPSRAYLGGRG 118 +AVVEGRFT ++G QA +L SGAE DEDGSVIA+RS+ DG SRA+LGGR Sbjct 61 KAVVEGRFTE-------ISGEQALRILSDSGAETDEDGSVIAVRSVGADGRSRAHLGGRS 113 Query 119 VPAKSLSGFTNELLTLHGQNDQLRLMRPDEQRGALDRFAAAGEAVQ----RYRKLRDAWL 174 VP L + +LL +HGQNDQLRL+RP EQR LDRFA GE V YRK R WL Sbjct 114 VPVGVLGKLSEQLLAVHGQNDQLRLLRPAEQRAVLDRFA--GEDVAGPLADYRKTRQEWL 171 Query 175 TARRDLVDRRNRARELAQEADRLKFALNEIDTVDPQPGEDVALVADIARLSELDTLREAA 234 + R+L +RR+R+RELAQ+AD L+ L EI+ VDP PGEDV L + RL+ +D LR+ A Sbjct 172 SVARELEERRSRSRELAQQADLLRHGLAEIEAVDPAPGEDVELTEQVKRLAAVDELRDTA 231 Query 235 TTARATLCGTPDADAFDRGAVDSLGRARAALQSSDDAALRGLAEQVGEALTVVVDAVAEL 294 T A + G D D GA+ L AR L S++DA LR L +V EA ++ + EL Sbjct 232 TAALIAVTGASDGDPDVPGALGLLAEARRRLGSAEDATLRELEPRVSEAAVLLDEVGREL 291 Query 295 GAYLDELPADASALDAKLARQAQLRTLTRKYAADIDGVLRWADEARARLAQLDVSEEGLA 354 AYLD L AD L+A LARQA+L+ LTRKYAAD+DGVL WA++ARARLA +D SEE L Sbjct 292 TAYLDTLDADPERLEAILARQAELKKLTRKYAADVDGVLAWAEDARARLAGMDTSEEALE 351 Query 355 ALERRTGELAHELGQAAVDLSTIRRKAAKRLAKEVSAELSALAMADAEFTIGVTTELADH 414 L R LA EL A LS RR AA L K+++ ELS+LAM A + V + D Sbjct 352 ELAARRDALAEELAGHAARLSAARRTAAAELGKQITTELSSLAMGQAALEVTVRGKQTDA 411 Query 415 GDPVALALASGELARAGADGVDAVEFGFVAHRGMTVLPLAKSASGGELSRVMLSLEVVLA 474 DP+AL + G+ AG DGVD +E AH LP+ K+ASGGELSRVML++EVVLA Sbjct 412 TDPLALTV-DGQTVTAGPDGVDEIELLLRAHAKAPALPVHKAASGGELSRVMLAIEVVLA 470 Query 475 TSRKQAAGTTMVFDEIDAGVGGWAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLMV 534 + T+VFDE+DAGVGG AAV+IGRRLARLARTHQV+VVTHLPQVAA+AD HLMV Sbjct 471 HTDTV---QTLVFDEVDAGVGGRAAVEIGRRLARLARTHQVLVVTHLPQVAAFADRHLMV 527 Query 535 QRTGRDGA--SGVRRLTSEDRVAELARMLAGLGDSDSGRAHARELLETAQN 583 + DG SGVR L E+RV ELARMLAGL D+++GRAHA ELL +A+ Sbjct 528 DKGLSDGVTRSGVRTLDDEERVTELARMLAGLDDTETGRAHAEELLNSAKE 578 >gi|302528023|ref|ZP_07280365.1| DNA repair protein RecN [Streptomyces sp. AA4] gi|302436918|gb|EFL08734.1| DNA repair protein RecN [Streptomyces sp. AA4] Length=594 Score = 557 bits (1435), Expect = 2e-156, Method: Compositional matrix adjust. Identities = 322/589 (55%), Positives = 404/589 (69%), Gaps = 13/589 (2%) Query 1 VLTELRIESLGAISVATAEFDRGFTVLTGETGTGKTMVVTGLHLLGGARADATRVRSGAD 60 +L E+RI+ LG I A E GFTV+TGETG GKTMVVTGLHLL G RA+A++VR+G Sbjct 1 MLAEMRIQGLGVIEEALLELHAGFTVVTGETGAGKTMVVTGLHLLSGGRAEASKVRNGML 60 Query 61 RAVVEGRFTTTDLDDATVAGLQAVLDSSGAERDEDGSVIALRSISRDGPSRAYLGGRGVP 120 +A VEGRFT DDA ++ +GA+ DEDGSVIALR+++ DG SRA+LGGR VP Sbjct 61 KAFVEGRFTVGK-DDAAAR----IVTDAGADVDEDGSVIALRTVAADGRSRAHLGGRSVP 115 Query 121 AKSLSGFTNELLTLHGQNDQLRLMRPDEQRGALDRFA--AAGEAVQRYRKLRDAWLTARR 178 LS + +++ +HGQNDQLRL+RP EQR +DRFA A G + YR++R+ WL+ Sbjct 116 VGVLSELSEQVIAVHGQNDQLRLLRPAEQRAVIDRFAGDAVGRPLAEYRRVREEWLSVLT 175 Query 179 DLVDRRNRARELAQEADRLKFALNEIDTVDPQPGEDVALVADIARLSELDTLREAATTAR 238 +L +R NR+RE+AQ+AD LK LNEID V P+PGEDV L I RL+ +D LR AT A Sbjct 176 ELSERSNRSREMAQQADLLKHGLNEIDAVAPEPGEDVELTEQIKRLAAVDELRAMATEAH 235 Query 239 ATLCGTPDADAFDRGAVDSLGRARAALQSSDDAALRGLAEQVGEALTVVVDAVAELGAYL 298 A + G D D GA+ +G A L S++D+ LR L ++ EA T++ D AELG Y+ Sbjct 236 AAVSGAQDGDPDAPGALGLVGEAVRRLVSAEDSVLRDLVPRLEEASTLLSDVGAELGGYV 295 Query 299 DELPADASALDAKLARQAQLRTLTRKYAADIDGVLRWADEARARLAQLDVSEEGLAALER 358 + L AD + L+ LARQA L+ LTRKYAAD+DGVL WA++AR RL +D SEE LAAL Sbjct 296 ENLDADPALLEKVLARQADLKRLTRKYAADVDGVLAWAEDARRRLESMDTSEEALAALAL 355 Query 359 RTGELAHELGQAAVDLSTIRRKAAKRLAKEVSAELSALAMADAEFTIGVTTELADHGDPV 418 R ELA EL A ++S R KAA LA ++ ELS LAM AE I V A+HGD Sbjct 356 RRDELAVELVAHATEVSAARGKAAAELATAITKELSGLAMGQAELEITVEQRPAEHGDRQ 415 Query 419 ALALASGELARAGADGVDAVEFGFVAHRGMTVLPLAKSASGGELSRVMLSLEVVLATSRK 478 ALA+ G AG DGVD VE AH G LP+ K+ASGGELSRVML++EVVLA + Sbjct 416 ALAI-DGHAVHAGPDGVDEVELLLRAHNGAPPLPVHKAASGGELSRVMLAIEVVLAHADT 474 Query 479 QAAGTTMVFDEIDAGVGGWAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLMVQRTG 538 T+VFDE+DAGVGG AAV+IGRRLARLARTHQV+VVTHLPQVAA+AD HL+V + Sbjct 475 V---QTLVFDEVDAGVGGRAAVEIGRRLARLARTHQVLVVTHLPQVAAFADQHLVVDKGT 531 Query 539 RDGA--SGVRRLTSEDRVAELARMLAGLGDSDSGRAHARELLETAQNDE 585 G SGV+ L +DRV ELARMLAG+ +++GRAHA ELL TA+ D+ Sbjct 532 SGGVTRSGVKTLGQDDRVRELARMLAGMDGTETGRAHAEELLATAEKDK 580 >gi|343928400|ref|ZP_08767848.1| DNA repair protein RecN [Gordonia alkanivorans NBRC 16433] gi|343761585|dbj|GAA14774.1| DNA repair protein RecN [Gordonia alkanivorans NBRC 16433] Length=584 Score = 543 bits (1399), Expect = 4e-152, Method: Compositional matrix adjust. Identities = 317/592 (54%), Positives = 398/592 (68%), Gaps = 24/592 (4%) Query 1 VLTELRIESLGAISVATAEFDRGFTVLTGETGTGKTMVVTGLHLLGGARADATRVRSGAD 60 +L EL I LG I A A F GFTVLTGETG GKTM+VT LHLL GARADATRVR+G+ Sbjct 1 MLEELSITGLGVIEEAQARFHPGFTVLTGETGAGKTMIVTSLHLLSGARADATRVRTGSA 60 Query 61 RAVVEGRFTTTDLD----DATVAGLQAVLDSSGAERDEDGSVIALRSISRDGPSRAYLGG 116 +A+VEGRF + + D VA +LDS+GAE D+D +VIA+RS+ DG SRA+LGG Sbjct 61 KAIVEGRFRLANAEGVQKDPVVAD---ILDSTGAELDDDDTVIAVRSVRADGRSRAHLGG 117 Query 117 RGVPAKSLSGFTNELLTLHGQNDQLRLMRPDEQRGALDRFAA--AGEAVQRYRKLRDAWL 174 R VP + T +L +HGQNDQLRL+RP+ QR ALD F A A+ YRK R AW+ Sbjct 118 RSVPVGVMGQLTTAVLAIHGQNDQLRLLRPEHQRAALDTFGGTKATAALDAYRKARTAWV 177 Query 175 TARRDLVDRRNRARELAQEADRLKFALNEIDTVDPQPGEDVALVADIARLSELDTLREAA 234 +L RR RELAQEADRL+F ++EI VDP PGED L A I RLS+L+++R AA Sbjct 178 DILDELDARRANYRELAQEADRLRFGIDEIAAVDPVPGEDEELTATIRRLSDLESIRGAA 237 Query 235 TTARATLCGTPDADAFDRGA--VDSLGRARAALQSSDDAALRGLAEQVGEALTVVVDAVA 292 A + G D G+ ++ LG R L+ + D LRGL +V EALTV+ D A Sbjct 238 DQAHDIVAG-------DSGSSVIEGLGAVRTLLEGAADDTLRGLVPRVSEALTVITDVGA 290 Query 293 ELGAYLDELPADASALDAKLARQAQLRTLTRKYAADIDGVLRWADEARARLAQLDVSEEG 352 EL A+ LPADA LD LARQA+L++L RKYA D+DGV+ W +A+ARLA+++ Sbjct 291 ELTAFTSSLPADADELDKLLARQAELKSLVRKYAPDVDGVIDWRHKAQARLAEIEDPRAS 350 Query 353 LAALERRTGELAHELGQAAVDLSTIRRKAAKRLAKEVSAELSALAMADAEFTIGVTTELA 412 + LE ++ AA L T+R KAA +A +VS EL LAM D+ + V+ + A Sbjct 351 IEELESAAATALEKVEAAATRLHTLRVKAASSMADKVSKELKGLAMGDSALAVSVSPDPA 410 Query 413 DHGDPVALALASGELARAGADGVDAVEFGFVAHRGMTVLPLAKSASGGELSRVMLSLEVV 472 D +A+ + G A AGADG D VEF VAH G T LP+AKSASGGELSRVML+LEVV Sbjct 411 SPEDRLAITI-DGTRAHAGADGADKVEFALVAHPGATPLPIAKSASGGELSRVMLALEVV 469 Query 473 LATSRKQAAGTTMVFDEIDAGVGGWAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHL 532 LA +G+ MVFDE+DAGVGG AAV+IG+RL+RLAR HQVIVVTHLPQVAA+AD HL Sbjct 470 LAAP---TSGSVMVFDEVDAGVGGRAAVEIGKRLSRLARAHQVIVVTHLPQVAAFADNHL 526 Query 533 MVQRTGRDG--ASGVRRLTSEDRVAELARMLAGLGDSDSGRAHARELLETAQ 582 ++ ++ + S VR L ++RVAELARMLAGLG+SD+GRAHA ELL TA+ Sbjct 527 VIGKSKKGSLVTSSVRTLDRDERVAELARMLAGLGESDTGRAHAEELLATAE 578 >gi|291003075|ref|ZP_06561048.1| recombination and DNA repair protein [Saccharopolyspora erythraea NRRL 2338] Length=606 Score = 539 bits (1388), Expect = 6e-151, Method: Compositional matrix adjust. Identities = 328/590 (56%), Positives = 400/590 (68%), Gaps = 18/590 (3%) Query 1 VLTELRIESLGAISVATAEFDRGFTVLTGETGTGKTMVVTGLHLLGGARADATRVRSGAD 60 +L E+RI+ LG I AT E G TV+TGETG GKTMVVTGLHLLGG RADA+RVRSGA Sbjct 1 MLAEMRIQGLGVIDDATLELHPGLTVVTGETGAGKTMVVTGLHLLGGGRADASRVRSGAP 60 Query 61 RAVVEGRFTTTDLDDATVAGLQAVLDSSGAERDEDGSVIALRSISRDGPSRAYLGGRGVP 120 RAVVEGRF TT A V +GAE DEDGS+IA+R+++ DG SRA+LGGR VP Sbjct 61 RAVVEGRFETTPESPAA-----KVARDAGAEPDEDGSLIAVRNVNADGRSRAHLGGRSVP 115 Query 121 AKSLSGFTNELLTLHGQNDQLRLMRPDEQRGALDRFAAAGEAVQR----YRKLRDAWLTA 176 LS ++L +HGQNDQLRL+R EQR LDRFA G++V R Y++ R W A Sbjct 116 NAVLSELAEQVLAVHGQNDQLRLLRGGEQRAVLDRFA--GDSVLRPLADYQRTRSEWAEA 173 Query 177 RRDLVDRRNRARELAQEADRLKFALNEIDTVDPQPGEDVALVADIARLSELDTLREAATT 236 R++ +R R+RELA+EAD L+ L+EID V P+PGED ALV + RL+++D LRE AT Sbjct 174 VREITERTQRSRELAREADLLRHGLSEIDAVAPEPGEDTALVDEARRLADVDQLREIATG 233 Query 237 ARATLCGTPDADAFDRGAVDSLGRARAALQSSDDAALRGLAEQVGEALTVVVDAVAELGA 296 A+ L G D D GA+ +G AR L ++D LR + +V EA V+ D ELG Sbjct 234 AQIALSGAVDGDPDAPGAMGLIGDARRRLGGAEDPVLREMEPRVAEAAAVLADVGTELGG 293 Query 297 YLDELPADASALDAKLARQAQLRTLTRKYAADIDGVLRWADEARARLAQLDVSEEGLAAL 356 YLD L AD + L+ LARQA+L+ LT+KYAADIDGVL WA++AR RL+ +D S+E LAAL Sbjct 294 YLDRLDADPARLEQVLARQAELKQLTKKYAADIDGVLDWAEDARQRLSGMDTSDEALAAL 353 Query 357 ERRTGELAHELGQAAVDLSTIRRKAAKRLAKEVSAELSALAMADAEFTIGVTTELADHGD 416 R ELA E+ + A +S R +AA RLA V+AEL+ LAM+ A + V D D Sbjct 354 AARRDELAAEVAEHAQIVSAGRAEAAVRLAGAVTAELAGLAMSQARLEVVVRPRETDDSD 413 Query 417 PVALALASGELARAGADGVDAVEFGFVAHRGMTVLPLAKSASGGELSRVMLSLEVVLATS 476 AL + G AG DGVD VE VAH G LP+ K ASGGELSRVML LEVVLA + Sbjct 414 TSALTV-DGRTVHAGPDGVDEVELQLVAHSGAPALPIHKGASGGELSRVMLGLEVVLADA 472 Query 477 RKQAAGTTMVFDEIDAGVGGWAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLMVQR 536 T+VFDE+DAGVGG AAV+IGRRLARLARTHQVIVVTHLPQVAAYAD HL+V + Sbjct 473 DTV---PTLVFDEVDAGVGGRAAVEIGRRLARLARTHQVIVVTHLPQVAAYADRHLVVDK 529 Query 537 TGRDGA---SGVRRLTSEDRVAELARMLAGLGDSDSGRAHARELLETAQN 583 DG S VR + E+RVAELARMLAGL +++GRAHA ELL TA + Sbjct 530 GASDGGLTRSDVRTVADEERVAELARMLAGLDSTETGRAHAEELLATASS 579 >gi|134101752|ref|YP_001107413.1| recombination and DNA repair protein [Saccharopolyspora erythraea NRRL 2338] gi|133914375|emb|CAM04488.1| recombination and DNA repair protein [Saccharopolyspora erythraea NRRL 2338] Length=605 Score = 538 bits (1386), Expect = 1e-150, Method: Compositional matrix adjust. Identities = 327/589 (56%), Positives = 399/589 (68%), Gaps = 18/589 (3%) Query 2 LTELRIESLGAISVATAEFDRGFTVLTGETGTGKTMVVTGLHLLGGARADATRVRSGADR 61 + E+RI+ LG I AT E G TV+TGETG GKTMVVTGLHLLGG RADA+RVRSGA R Sbjct 1 MAEMRIQGLGVIDDATLELHPGLTVVTGETGAGKTMVVTGLHLLGGGRADASRVRSGAPR 60 Query 62 AVVEGRFTTTDLDDATVAGLQAVLDSSGAERDEDGSVIALRSISRDGPSRAYLGGRGVPA 121 AVVEGRF TT A V +GAE DEDGS+IA+R+++ DG SRA+LGGR VP Sbjct 61 AVVEGRFETTPESPAA-----KVARDAGAEPDEDGSLIAVRNVNADGRSRAHLGGRSVPN 115 Query 122 KSLSGFTNELLTLHGQNDQLRLMRPDEQRGALDRFAAAGEAVQR----YRKLRDAWLTAR 177 LS ++L +HGQNDQLRL+R EQR LDRFA G++V R Y++ R W A Sbjct 116 AVLSELAEQVLAVHGQNDQLRLLRGGEQRAVLDRFA--GDSVLRPLADYQRTRSEWAEAV 173 Query 178 RDLVDRRNRARELAQEADRLKFALNEIDTVDPQPGEDVALVADIARLSELDTLREAATTA 237 R++ +R R+RELA+EAD L+ L+EID V P+PGED ALV + RL+++D LRE AT A Sbjct 174 REITERTQRSRELAREADLLRHGLSEIDAVAPEPGEDTALVDEARRLADVDQLREIATGA 233 Query 238 RATLCGTPDADAFDRGAVDSLGRARAALQSSDDAALRGLAEQVGEALTVVVDAVAELGAY 297 + L G D D GA+ +G AR L ++D LR + +V EA V+ D ELG Y Sbjct 234 QIALSGAVDGDPDAPGAMGLIGDARRRLGGAEDPVLREMEPRVAEAAAVLADVGTELGGY 293 Query 298 LDELPADASALDAKLARQAQLRTLTRKYAADIDGVLRWADEARARLAQLDVSEEGLAALE 357 LD L AD + L+ LARQA+L+ LT+KYAADIDGVL WA++AR RL+ +D S+E LAAL Sbjct 294 LDRLDADPARLEQVLARQAELKQLTKKYAADIDGVLDWAEDARQRLSGMDTSDEALAALA 353 Query 358 RRTGELAHELGQAAVDLSTIRRKAAKRLAKEVSAELSALAMADAEFTIGVTTELADHGDP 417 R ELA E+ + A +S R +AA RLA V+AEL+ LAM+ A + V D D Sbjct 354 ARRDELAAEVAEHAQIVSAGRAEAAVRLAGAVTAELAGLAMSQARLEVVVRPRETDDSDT 413 Query 418 VALALASGELARAGADGVDAVEFGFVAHRGMTVLPLAKSASGGELSRVMLSLEVVLATSR 477 AL + G AG DGVD VE VAH G LP+ K ASGGELSRVML LEVVLA + Sbjct 414 SALTV-DGRTVHAGPDGVDEVELQLVAHSGAPALPIHKGASGGELSRVMLGLEVVLADAD 472 Query 478 KQAAGTTMVFDEIDAGVGGWAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLMVQRT 537 T+VFDE+DAGVGG AAV+IGRRLARLARTHQVIVVTHLPQVAAYAD HL+V + Sbjct 473 TV---PTLVFDEVDAGVGGRAAVEIGRRLARLARTHQVIVVTHLPQVAAYADRHLVVDKG 529 Query 538 GRDGA---SGVRRLTSEDRVAELARMLAGLGDSDSGRAHARELLETAQN 583 DG S VR + E+RVAELARMLAGL +++GRAHA ELL TA + Sbjct 530 ASDGGLTRSDVRTVADEERVAELARMLAGLDSTETGRAHAEELLATASS 578 >gi|300787878|ref|YP_003768169.1| DNA repair protein RecN [Amycolatopsis mediterranei U32] gi|299797392|gb|ADJ47767.1| DNA repair protein RecN [Amycolatopsis mediterranei U32] Length=603 Score = 537 bits (1383), Expect = 2e-150, Method: Compositional matrix adjust. Identities = 315/589 (54%), Positives = 404/589 (69%), Gaps = 14/589 (2%) Query 1 VLTELRIESLGAISVATAEFDRGFTVLTGETGTGKTMVVTGLHLLGGARADATRVRSGAD 60 VL E+RI+ LG I A E GFTV+TGETG GKTMVVTGLHLL G RA+ ++VR+G Sbjct 11 VLAEMRIQGLGVIEDALLELHAGFTVVTGETGAGKTMVVTGLHLLSGGRAEVSKVRTGML 70 Query 61 RAVVEGRFTTTDLDDATVAGLQAVLDSSGAERDEDGSVIALRSISRDGPSRAYLGGRGVP 120 +A VEGRFT + V G + ++ SGA+ DEDGSVIALR+++ DG SRA+LGGR VP Sbjct 71 KAFVEGRFTYSG-----VEGAERIVTDSGADVDEDGSVIALRAVAVDGRSRAHLGGRSVP 125 Query 121 AKSLSGFTNELLTLHGQNDQLRLMRPDEQRGALDRFA--AAGEAVQRYRKLRDAWLTARR 178 L+ + +L+ +HGQNDQLRL+RP EQR +DRFA A + ++ Y+++R WL Sbjct 126 VGVLAELSEQLIAVHGQNDQLRLLRPAEQRAVIDRFAGDAVAKPLRAYQEIRSEWLAVIA 185 Query 179 DLVDRRNRARELAQEADRLKFALNEIDTVDPQPGEDVALVADIARLSELDTLREAATTAR 238 +L +R R+RE+AQ+AD LK L EID V P+PGEDV L I RL+ +D LR AAT A Sbjct 186 ELTERSTRSREMAQQADLLKHGLTEIDAVAPEPGEDVELTDQIKRLAAVDELRAAATEAH 245 Query 239 ATLCGTPDADAFDRGAVDSLGRARAALQSSDDAALRGLAEQVGEALTVVVDAVAELGAYL 298 A + G+PD D GA+ + A L +++DA LR LA ++ EA ++ D AELG Y+ Sbjct 246 AAVSGSPDGDLDAPGAMGLVSEALRRLSTAEDAVLRELAPRLEEASVLLTDVGAELGNYV 305 Query 299 DELPADASALDAKLARQAQLRTLTRKYAADIDGVLRWADEARARLAQLDVSEEGLAALER 358 + L AD + L+ LARQ+ L+ LTRKYAAD+DGVL WAD+AR RL +D SEE LA L Sbjct 306 ETLDADPALLEKVLARQSDLKRLTRKYAADVDGVLAWADDARRRLETMDTSEEALAELAL 365 Query 359 RTGELAHELGQAAVDLSTIRRKAAKRLAKEVSAELSALAMADAEFTIGVTTELADHGDPV 418 R +LA +L A ++S R KAA LA E++ ELS LAM A + V A+HGD Sbjct 366 RRDQLAIQLAAHASEVSGAREKAAASLAAEITRELSGLAMGQAAIEVTVEQRPAEHGDTH 425 Query 419 ALALASGELARAGADGVDAVEFGFVAHRGMTVLPLAKSASGGELSRVMLSLEVVLATSRK 478 AL + G AG DGVD VE AH G LP+ K+ASGGELSRVML++EVVLA + Sbjct 426 ALTI-DGRAVHAGPDGVDDVELLLRAHDGAPPLPVHKAASGGELSRVMLAIEVVLAHADT 484 Query 479 QAAGTTMVFDEIDAGVGGWAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLMVQR-- 536 T+VFDE+DAGVGG AAV+IGRRLARLARTHQV+VVTHLPQVAA+AD HL+V + Sbjct 485 V---QTLVFDEVDAGVGGRAAVEIGRRLARLARTHQVLVVTHLPQVAAFADQHLVVDKGH 541 Query 537 TGRDGASGVRRLTSEDRVAELARMLAGLGDSDSGRAHARELLETAQNDE 585 TG SGV+ L+ +RV+ELARMLAG+ D+++GRAHA ELL TA+ D+ Sbjct 542 TGGVTRSGVKNLSQTERVSELARMLAGM-DNETGRAHAEELLATAEKDK 589 >gi|340529450|gb|AEK44655.1| DNA repair protein RecN [Amycolatopsis mediterranei S699] Length=593 Score = 536 bits (1380), Expect = 6e-150, Method: Compositional matrix adjust. Identities = 314/589 (54%), Positives = 404/589 (69%), Gaps = 14/589 (2%) Query 1 VLTELRIESLGAISVATAEFDRGFTVLTGETGTGKTMVVTGLHLLGGARADATRVRSGAD 60 +L E+RI+ LG I A E GFTV+TGETG GKTMVVTGLHLL G RA+ ++VR+G Sbjct 1 MLAEMRIQGLGVIEDALLELHAGFTVVTGETGAGKTMVVTGLHLLSGGRAEVSKVRTGML 60 Query 61 RAVVEGRFTTTDLDDATVAGLQAVLDSSGAERDEDGSVIALRSISRDGPSRAYLGGRGVP 120 +A VEGRFT + V G + ++ SGA+ DEDGSVIALR+++ DG SRA+LGGR VP Sbjct 61 KAFVEGRFTYSG-----VEGAERIVTDSGADVDEDGSVIALRAVAVDGRSRAHLGGRSVP 115 Query 121 AKSLSGFTNELLTLHGQNDQLRLMRPDEQRGALDRFA--AAGEAVQRYRKLRDAWLTARR 178 L+ + +L+ +HGQNDQLRL+RP EQR +DRFA A + ++ Y+++R WL Sbjct 116 VGVLAELSEQLIAVHGQNDQLRLLRPAEQRAVIDRFAGDAVAKPLRAYQEIRSEWLAVIA 175 Query 179 DLVDRRNRARELAQEADRLKFALNEIDTVDPQPGEDVALVADIARLSELDTLREAATTAR 238 +L +R R+RE+AQ+AD LK L EID V P+PGEDV L I RL+ +D LR AAT A Sbjct 176 ELTERSTRSREMAQQADLLKHGLTEIDAVAPEPGEDVELTDQIKRLAAVDELRAAATEAH 235 Query 239 ATLCGTPDADAFDRGAVDSLGRARAALQSSDDAALRGLAEQVGEALTVVVDAVAELGAYL 298 A + G+PD D GA+ + A L +++DA LR LA ++ EA ++ D AELG Y+ Sbjct 236 AAVSGSPDGDLDAPGAMGLVSEALRRLSTAEDAVLRELAPRLEEASVLLTDVGAELGNYV 295 Query 299 DELPADASALDAKLARQAQLRTLTRKYAADIDGVLRWADEARARLAQLDVSEEGLAALER 358 + L AD + L+ LARQ+ L+ LTRKYAAD+DGVL WAD+AR RL +D SEE LA L Sbjct 296 ETLDADPALLEKVLARQSDLKRLTRKYAADVDGVLAWADDARRRLETMDTSEEALAELAL 355 Query 359 RTGELAHELGQAAVDLSTIRRKAAKRLAKEVSAELSALAMADAEFTIGVTTELADHGDPV 418 R +LA +L A ++S R KAA LA E++ ELS LAM A + V A+HGD Sbjct 356 RRDQLAIQLAAHASEVSGAREKAAASLAAEITRELSGLAMGQAAIEVTVEQRPAEHGDTH 415 Query 419 ALALASGELARAGADGVDAVEFGFVAHRGMTVLPLAKSASGGELSRVMLSLEVVLATSRK 478 AL + G AG DGVD VE AH G LP+ K+ASGGELSRVML++EVVLA + Sbjct 416 ALTI-DGRAVHAGPDGVDDVELLLRAHDGAPPLPVHKAASGGELSRVMLAIEVVLAHADT 474 Query 479 QAAGTTMVFDEIDAGVGGWAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLMVQR-- 536 T+VFDE+DAGVGG AAV+IGRRLARLARTHQV+VVTHLPQVAA+AD HL+V + Sbjct 475 V---QTLVFDEVDAGVGGRAAVEIGRRLARLARTHQVLVVTHLPQVAAFADQHLVVDKGH 531 Query 537 TGRDGASGVRRLTSEDRVAELARMLAGLGDSDSGRAHARELLETAQNDE 585 TG SGV+ L+ +RV+ELARMLAG+ D+++GRAHA ELL TA+ D+ Sbjct 532 TGGVTRSGVKNLSQTERVSELARMLAGM-DNETGRAHAEELLATAEKDK 579 >gi|262202725|ref|YP_003273933.1| DNA repair protein RecN [Gordonia bronchialis DSM 43247] gi|262086072|gb|ACY22040.1| DNA repair protein RecN [Gordonia bronchialis DSM 43247] Length=590 Score = 535 bits (1377), Expect = 1e-149, Method: Compositional matrix adjust. Identities = 312/596 (53%), Positives = 401/596 (68%), Gaps = 24/596 (4%) Query 1 VLTELRIESLGAISVATAEFDRGFTVLTGETGTGKTMVVTGLHLLGGARADATRVRSGAD 60 +L EL I LG I A+A F GFTVLTGETG GKTM+VT LHLL GARADA RVR+G+ Sbjct 1 MLEELTISGLGVIEAASARFHPGFTVLTGETGAGKTMIVTSLHLLSGARADANRVRNGSP 60 Query 61 RAVVEGRFTTTDLDDAT----VAGLQA------VLDSSGAERDEDGSVIALRSISRDGPS 110 +AVVEGRF A +G+Q +L+S+GAE D+D +VIA+R++ DG S Sbjct 61 KAVVEGRFRLPGQGSAAAGTQTSGIQQDSVVAEILESTGAELDDDDTVIAVRTVGADGRS 120 Query 111 RAYLGGRGVPAKSLSGFTNELLTLHGQNDQLRLMRPDEQRGALDRFAAA--GEAVQRYRK 168 RA+LGGR VP + TN +L +HGQNDQLRL+RP+ QR ALD FA A +A+ YR+ Sbjct 121 RAHLGGRSVPVGVMGRLTNAVLAIHGQNDQLRLLRPEHQRAALDAFAGARADKALTAYRR 180 Query 169 LRDAWLTARRDLVDRRNRARELAQEADRLKFALNEIDTVDPQPGEDVALVADIARLSELD 228 RDAW+ +L RR RE+AQEADRL+F ++EI VDP PGED L A I RL++L+ Sbjct 181 ARDAWIEILDELDARRANYREIAQEADRLRFGIDEIAAVDPAPGEDEELAATIRRLTDLE 240 Query 229 TLREAATTARATLCGTPDADAFDRGAVDSLGRARAALQSSDDAALRGLAEQVGEALTVVV 288 ++R AA T++ + G R ++ LG+ R L++ D LR L +V EALTV+ Sbjct 241 SIRTAAATSQDLVAGD------GRSVIEGLGQVRDILETVADETLRALVPRVSEALTVIT 294 Query 289 DAVAELGAYLDELPADASALDAKLARQAQLRTLTRKYAADIDGVLRWADEARARLAQLDV 348 D AEL A+L +LPADA LD L RQA+L+ L RKYA DIDGV+ W +A+ARLA+++ Sbjct 295 DVGAELTAFLSDLPADAEELDKLLTRQAELKALVRKYAPDIDGVIAWRMQAQARLAEIED 354 Query 349 SEEGLAALERRTGELAHELGQAAVDLSTIRRKAAKRLAKEVSAELSALAMADAEFTIGVT 408 + LE ++ AA L +R K+A +A +VSAEL LAM DA + VT Sbjct 355 PRSSIEELEAAAATARTDVEAAAGKLHAVRAKSATSMANKVSAELRGLAMGDAALDVAVT 414 Query 409 TELADHGDPVALALASGELARAGADGVDAVEFGFVAHRGMTVLPLAKSASGGELSRVMLS 468 E A D + + + G A AGADG D VEF +AH+ LP+A SASGGELSRVML+ Sbjct 415 PEPASADDRLGIDVV-GTRAHAGADGADRVEFALIAHKNAHPLPIATSASGGELSRVMLA 473 Query 469 LEVVLATSRKQAAGTTMVFDEIDAGVGGWAAVQIGRRLARLARTHQVIVVTHLPQVAAYA 528 LEVVLA + +G+ MVFDE+DAGVGG AAV+IG+RLA LAR HQVIVVTHLPQVAA+A Sbjct 474 LEVVLA---EPTSGSVMVFDEVDAGVGGRAAVEIGKRLAGLARAHQVIVVTHLPQVAAFA 530 Query 529 DVHLMVQRTGRDGA--SGVRRLTSEDRVAELARMLAGLGDSDSGRAHARELLETAQ 582 D HL++ ++ GA S VR L ++RVAELARMLAGLG+SD+G+AHA ELL+TA+ Sbjct 531 DNHLVIGKSSGRGAHTSTVRELDRDERVAELARMLAGLGESDTGKAHAEELLQTAE 586 >gi|326384766|ref|ZP_08206443.1| DNA repair protein RecN [Gordonia neofelifaecis NRRL B-59395] gi|326196574|gb|EGD53771.1| DNA repair protein RecN [Gordonia neofelifaecis NRRL B-59395] Length=580 Score = 525 bits (1351), Expect = 1e-146, Method: Compositional matrix adjust. Identities = 315/590 (54%), Positives = 401/590 (68%), Gaps = 22/590 (3%) Query 1 VLTELRIESLGAISVATAEFDRGFTVLTGETGTGKTMVVTGLHLLGGARADATRVRSGAD 60 +L EL I SLG + A+A+F GFTVLTGETG GKTM+VT L LL G RADA RVR+G Sbjct 1 MLEELSIRSLGVLESASAQFHPGFTVLTGETGAGKTMIVTSLRLLSGGRADAGRVRTGDA 60 Query 61 RAVVEGRFTTTDLDDATVAGLQAVLDSSGAERDEDGSVIALRSISRDGPSRAYLGGRGVP 120 +A+VEGRF D TV + +L+ +GA+ D+D ++IA R+++ DG SRA+LGGR VP Sbjct 61 KAIVEGRFRLPA--DRTV--VSELLEDTGADVDDDDTLIAARTVNADGRSRAHLGGRSVP 116 Query 121 AKSLSGFTNELLTLHGQNDQLRLMRPDEQRGALDRFAAAG--EAVQRYRKLRDAWLTARR 178 +L+ T ELL +HGQNDQLRL+RPD+QRGALDR+A + + +YR R AW+ Sbjct 117 VGTLAQLTGELLAIHGQNDQLRLIRPDQQRGALDRYAGSSVSTTLTKYRSARSAWIDLLD 176 Query 179 DLVDRRNRARELAQEADRLKFALNEIDTVDPQPGEDVALVADIARLSELDTLREAATTAR 238 +L RR +RELAQEADRLKF ++EID V P+PGED L+A I R+++L+ +R A A+ Sbjct 177 ELDRRRANSRELAQEADRLKFGIDEIDAVAPEPGEDAELIATIRRMTDLEEIRTTAAQAQ 236 Query 239 ATLCGTPDADAFDRGAVDSLGRARAALQSSDDAALRGLAEQVGEALTVVVDAVAELGAYL 298 + G A VD LG R+ L+S+ D ALR L +V EALTVV D AEL AYL Sbjct 237 EIVAGAEGASV-----VDGLGTVRSLLESAADEALRELQPRVAEALTVVTDLGAELTAYL 291 Query 299 DELPADASALDAKLARQAQLRTLTRKYAADIDGVLRWADEARARLAQLDVSEEGLAALER 358 LP DA LD+ L RQA+L++LTRKYAADIDGVL W DEAR+RL +++ E + LE Sbjct 292 GGLPEDAGDLDSLLNRQAELKSLTRKYAADIDGVLAWRDEARSRLDEIEDPEGAIEELEA 351 Query 359 RTGELAHELGQAAVDLSTIRRKAAKRLAKEVSAELSALAMADAEFTIGVTTELADHGDPV 418 + + + A L R ++AK L +VSAEL+ LAM + + V+ AD Sbjct 352 KAAIARDTVSELATKLHGQRVRSAKSLGTKVSAELTGLAMGGSALAVSVSLLPADD---A 408 Query 419 ALAL-ASGELARAGADGVDAVEFGFVAHRGMTVLPLAKSASGGELSRVMLSLEVVLATSR 477 LA+ G A AG DG D VEFG +AH+G LP+AKSASGGELSRVML+LEVVLA Sbjct 409 RLAIDVDGASAHAGGDGADRVEFGLIAHKGAAPLPIAKSASGGELSRVMLALEVVLA--- 465 Query 478 KQAAGTTMVFDEIDAGVGGWAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLMVQRT 537 + +G MVFDE+DAGVGG AAVQIG RLARLAR HQVIVVTHLPQVAA+AD HL++ ++ Sbjct 466 EPDSGGVMVFDEVDAGVGGAAAVQIGARLARLARRHQVIVVTHLPQVAAFADNHLVIGKS 525 Query 538 GRDG----ASGVRRLTSEDRVAELARMLAGLGDSDSGRAHARELLETAQN 583 G S + L +DR+AELARMLAGLGDS++G+AHA ELL TA+ Sbjct 526 GGGSKGRQTSTLTTLDRDDRIAELARMLAGLGDSETGKAHAEELLATAEQ 575 >gi|25028104|ref|NP_738158.1| putative DNA repair protein RecN [Corynebacterium efficiens YS-314] gi|23493388|dbj|BAC18358.1| putative DNA repair protein RecN [Corynebacterium efficiens YS-314] Length=596 Score = 515 bits (1326), Expect = 1e-143, Method: Compositional matrix adjust. Identities = 302/597 (51%), Positives = 386/597 (65%), Gaps = 34/597 (5%) Query 1 VLTELRIESLGAISVATAEFDRGFTVLTGETGTGKTMVVTGLHLLGGARADATRVRSGAD 60 +L ++ IE+LG I A+AEF G TVLTGETG GKTMVVTGL LL G RADA+RVR+GA Sbjct 4 MLADITIENLGVIPAASAEFSSGLTVLTGETGAGKTMVVTGLRLLSGGRADASRVRTGAR 63 Query 61 RAVVEGRFTTTDLDDATVAGLQAVLDSSGAERDEDGSVIALRSISRDGPSRAYLGGRGVP 120 +AVVEGRF T + V ++ ++G DE+G +A+RS+S +G S+A+LGGR VP Sbjct 64 QAVVEGRFVTENAPCDIVERATGIVSNAGGCADENGEFLAVRSVSANGRSKAHLGGRSVP 123 Query 121 AKSLSGFTNELLTLHGQNDQLRLMRPDEQRGALDRFAAAGEAVQR-YRKLRDAWLTARRD 179 A +LS F+ ELLT+HGQNDQLRL+ P+ Q ALDRF +++ Y + W RD Sbjct 124 AATLSEFSGELLTIHGQNDQLRLLSPERQLDALDRFLPTLSGLRKAYVEKYTTWKELSRD 183 Query 180 LVDRRNRARELAQEADRLKFALNEIDTVDPQPGEDVALVADIARLSELDTLREAATTARA 239 L R + RELAQE DRL+FA+NEID V+P PGEDV L+A I RL ++DTLRE A TA A Sbjct 184 LKQRVSSRRELAQEVDRLQFAINEIDAVEPTPGEDVELLAQIRRLQDVDTLREQAATALA 243 Query 240 ----------TLCGTPDADAFDRGAVDSLGRARAALQSSDDAALRGLAEQVGEALTVVVD 289 ++ G D A D LG+A +AL S+D LR ++ + E +++ + Sbjct 244 AIDGAGALNESMGGAAGFDEEQHSASDQLGQAESALSGSEDPKLREVSGLLSEITSLLGE 303 Query 290 AVAELGAYLDELPADASALDAKLARQAQLRTLTRKYAADIDGVLRWADEARARLAQLDVS 349 AELG +L +LPAD ALD L RQ QL+ LTRKYA DIDGVL W +A+ RL +D+S Sbjct 304 VSAELGGFLADLPADPQALDEMLTRQQQLKLLTRKYAGDIDGVLDWRRKAQIRLESIDIS 363 Query 350 EEGLAALERRTGELAHELGQAAVDLSTIRRKAAKRLAKEVSAELSALAMADAEFTIGVTT 409 E + L+ + + + +AA LST R +AAK L+ V+ EL LAM A F + +TT Sbjct 364 SEAIDKLKEQVRKAEAAMMRAARKLSTARAEAAKTLSATVTEELQGLAMQKARFVVSLTT 423 Query 410 ELADHGDPVALALASGELARAGADGVDAVEFGFVAHRGMTVLPLAKSASGGELSRVMLSL 469 G G+DAVEF A+ PLA SASGGELSRVML+L Sbjct 424 ------------------VEPGPMGIDAVEFQLAANALAQPRPLASSASGGELSRVMLAL 465 Query 470 EVVLATSRKQAAGTTMVFDEIDAGVGGWAAVQIGRRLARLARTHQVIVVTHLPQVAAYAD 529 EV+LA GTT+VFDE+DAGVGG AAV+IGRRLARLA +QVIVVTHLPQVAAYAD Sbjct 466 EVILAAG---TTGTTLVFDEVDAGVGGRAAVEIGRRLARLANDNQVIVVTHLPQVAAYAD 522 Query 530 VHLMVQRTGRDGA--SGVRRLTSEDRVAELARMLAGLGDSDSGRAHARELLETAQND 584 HL V + +GA SGV L+ + R+ EL+RMLAGL D+++GRAHA ELLE AQ + Sbjct 523 THLHVAKDVGEGAVTSGVENLSQDRRIEELSRMLAGLDDTETGRAHATELLERAQRE 579 >gi|259507160|ref|ZP_05750060.1| DNA repair protein RecN [Corynebacterium efficiens YS-314] gi|259165241|gb|EEW49795.1| DNA repair protein RecN [Corynebacterium efficiens YS-314] Length=593 Score = 514 bits (1325), Expect = 1e-143, Method: Compositional matrix adjust. Identities = 302/597 (51%), Positives = 386/597 (65%), Gaps = 34/597 (5%) Query 1 VLTELRIESLGAISVATAEFDRGFTVLTGETGTGKTMVVTGLHLLGGARADATRVRSGAD 60 +L ++ IE+LG I A+AEF G TVLTGETG GKTMVVTGL LL G RADA+RVR+GA Sbjct 1 MLADITIENLGVIPAASAEFSSGLTVLTGETGAGKTMVVTGLRLLSGGRADASRVRTGAR 60 Query 61 RAVVEGRFTTTDLDDATVAGLQAVLDSSGAERDEDGSVIALRSISRDGPSRAYLGGRGVP 120 +AVVEGRF T + V ++ ++G DE+G +A+RS+S +G S+A+LGGR VP Sbjct 61 QAVVEGRFVTENAPCDIVERATGIVSNAGGCADENGEFLAVRSVSANGRSKAHLGGRSVP 120 Query 121 AKSLSGFTNELLTLHGQNDQLRLMRPDEQRGALDRFAAAGEAVQR-YRKLRDAWLTARRD 179 A +LS F+ ELLT+HGQNDQLRL+ P+ Q ALDRF +++ Y + W RD Sbjct 121 AATLSEFSGELLTIHGQNDQLRLLSPERQLDALDRFLPTLSGLRKAYVEKYTTWKELSRD 180 Query 180 LVDRRNRARELAQEADRLKFALNEIDTVDPQPGEDVALVADIARLSELDTLREAATTARA 239 L R + RELAQE DRL+FA+NEID V+P PGEDV L+A I RL ++DTLRE A TA A Sbjct 181 LKQRVSSRRELAQEVDRLQFAINEIDAVEPTPGEDVELLAQIRRLQDVDTLREQAATALA 240 Query 240 ----------TLCGTPDADAFDRGAVDSLGRARAALQSSDDAALRGLAEQVGEALTVVVD 289 ++ G D A D LG+A +AL S+D LR ++ + E +++ + Sbjct 241 AIDGAGALNESMGGAAGFDEEQHSASDQLGQAESALSGSEDPKLREVSGLLSEITSLLGE 300 Query 290 AVAELGAYLDELPADASALDAKLARQAQLRTLTRKYAADIDGVLRWADEARARLAQLDVS 349 AELG +L +LPAD ALD L RQ QL+ LTRKYA DIDGVL W +A+ RL +D+S Sbjct 301 VSAELGGFLADLPADPQALDEMLTRQQQLKLLTRKYAGDIDGVLDWRRKAQIRLESIDIS 360 Query 350 EEGLAALERRTGELAHELGQAAVDLSTIRRKAAKRLAKEVSAELSALAMADAEFTIGVTT 409 E + L+ + + + +AA LST R +AAK L+ V+ EL LAM A F + +TT Sbjct 361 SEAIDKLKEQVRKAEAAMMRAARKLSTARAEAAKTLSATVTEELQGLAMQKARFVVSLTT 420 Query 410 ELADHGDPVALALASGELARAGADGVDAVEFGFVAHRGMTVLPLAKSASGGELSRVMLSL 469 G G+DAVEF A+ PLA SASGGELSRVML+L Sbjct 421 ------------------VEPGPMGIDAVEFQLAANALAQPRPLASSASGGELSRVMLAL 462 Query 470 EVVLATSRKQAAGTTMVFDEIDAGVGGWAAVQIGRRLARLARTHQVIVVTHLPQVAAYAD 529 EV+LA GTT+VFDE+DAGVGG AAV+IGRRLARLA +QVIVVTHLPQVAAYAD Sbjct 463 EVILAAG---TTGTTLVFDEVDAGVGGRAAVEIGRRLARLANDNQVIVVTHLPQVAAYAD 519 Query 530 VHLMVQRTGRDGA--SGVRRLTSEDRVAELARMLAGLGDSDSGRAHARELLETAQND 584 HL V + +GA SGV L+ + R+ EL+RMLAGL D+++GRAHA ELLE AQ + Sbjct 520 THLHVAKDVGEGAVTSGVENLSQDRRIEELSRMLAGLDDTETGRAHATELLERAQRE 576 >gi|344045130|gb|EGV40804.1| DNA repair protein RECN [Corynebacterium glutamicum S9114] Length=593 Score = 513 bits (1322), Expect = 3e-143, Method: Compositional matrix adjust. Identities = 300/598 (51%), Positives = 381/598 (64%), Gaps = 34/598 (5%) Query 1 VLTELRIESLGAISVATAEFDRGFTVLTGETGTGKTMVVTGLHLLGGARADATRVRSGAD 60 +L ++ IE+LG I A+AEF G TVLTGETG GKTMVVTGL LL G RADA+RVR+G+ Sbjct 1 MLVDIAIENLGVIPAASAEFSSGLTVLTGETGAGKTMVVTGLRLLSGGRADASRVRTGSP 60 Query 61 RAVVEGRFTTTDLDDATVAGLQAVLDSSGAERDEDGSVIALRSISRDGPSRAYLGGRGVP 120 +AVVEGRF T + V ++ ++G DE+G +A+RS+ +G S+A+LGGR VP Sbjct 61 QAVVEGRFVTQGVPCDIVERATGIVSNAGGAADENGEFLAVRSVGANGRSKAHLGGRSVP 120 Query 121 AKSLSGFTNELLTLHGQNDQLRLMRPDEQRGALDRF-AAAGEAVQRYRKLRDAWLTARRD 179 A +LS F++ELLT+HGQNDQLRL+ P+ Q ALDRF + + Y W + +D Sbjct 121 AATLSEFSDELLTIHGQNDQLRLLSPERQLDALDRFDPELAQLRKNYNAKYLTWKSLDKD 180 Query 180 LVDRRNRARELAQEADRLKFALNEIDTVDPQPGEDVALVADIARLSELDTLREAATTARA 239 L R + RELAQE DRL+FA+NEI+ V PQPGED LV I RL ++DTLRE A TA A Sbjct 181 LQKRLSSRRELAQEVDRLQFAINEIEEVSPQPGEDAELVEQIRRLQDVDTLREQAATALA 240 Query 240 TLCGT---PDA-------DAFDRGAVDSLGRARAALQSSDDAALRGLAEQVGEALTVVVD 289 + G DA D A D LG+A +AL SDD+ L+ +A Q+ E + + Sbjct 241 AIDGAGSLSDAMGGSGGFDESQESASDQLGQAESALAGSDDSKLKDIAVQLAEITSQLSQ 300 Query 290 AVAELGAYLDELPADASALDAKLARQAQLRTLTRKYAADIDGVLRWADEARARLAQLDVS 349 ELG +L +LPAD ALD L RQ QL+ LTRKYAADIDGV+ W +A+ RL +D+S Sbjct 301 VSMELGGFLSDLPADPQALDDMLTRQQQLKLLTRKYAADIDGVIEWQRKAQIRLDSIDIS 360 Query 350 EEGLAALERRTGELAHELGQAAVDLSTIRRKAAKRLAKEVSAELSALAMADAEFTIGVTT 409 E L L+ + + +AA LS +R KAA +L V+ EL LAM A F + +T+ Sbjct 361 SEALDKLKEDAKKAQASMMRAAKKLSAVRAKAATKLGTTVTEELQGLAMQKARFEVALTS 420 Query 410 ELADHGDPVALALASGELARAGADGVDAVEFGFVAHRGMTVLPLAKSASGGELSRVMLSL 469 A A G+D VEF A+ PLA SASGGELSRVML+L Sbjct 421 ------------------IEACASGIDQVEFQLAANAFAQPRPLASSASGGELSRVMLAL 462 Query 470 EVVLATSRKQAAGTTMVFDEIDAGVGGWAAVQIGRRLARLARTHQVIVVTHLPQVAAYAD 529 EV+LA GTT+VFDE+DAGVGG AAV+IGRRLARLA +QVIVVTHLPQVAAYAD Sbjct 463 EVILAAG---TTGTTLVFDEVDAGVGGRAAVEIGRRLARLANKNQVIVVTHLPQVAAYAD 519 Query 530 VHLMVQRTGRDGA--SGVRRLTSEDRVAELARMLAGLGDSDSGRAHARELLETAQNDE 585 HL V + + + SGV LT + RV EL+RMLAGL D+ +GRAHA ELLE AQ ++ Sbjct 520 THLHVAKNVGEASVTSGVESLTFDRRVEELSRMLAGLDDTATGRAHATELLERAQREK 577 Lambda K H 0.317 0.131 0.357 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1331117598876 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40