BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1698 Length=314 Score E Sequences producing significant alignments: (Bits) Value gi|15608836|ref|NP_216214.1| hypothetical protein Rv1698 [Mycoba... 616 1e-174 gi|15841155|ref|NP_336192.1| hypothetical protein MT1737 [Mycoba... 615 3e-174 gi|340626703|ref|YP_004745155.1| hypothetical protein MCAN_17071... 614 4e-174 gi|289447312|ref|ZP_06437056.1| conserved hypothetical protein [... 614 6e-174 gi|240170147|ref|ZP_04748806.1| hypothetical protein MkanA1_1259... 476 2e-132 gi|118462831|ref|YP_882257.1| hypothetical protein MAV_3073 [Myc... 475 5e-132 gi|183982518|ref|YP_001850809.1| hypothetical protein MMAR_2503 ... 474 1e-131 gi|118617315|ref|YP_905647.1| hypothetical protein MUL_1687 [Myc... 472 4e-131 gi|41407503|ref|NP_960339.1| hypothetical protein MAP1405 [Mycob... 470 2e-130 gi|289750254|ref|ZP_06509632.1| conserved hypothetical protein [... 467 9e-130 gi|15827709|ref|NP_301972.1| hypothetical protein ML1362 [Mycoba... 449 2e-124 gi|296164598|ref|ZP_06847165.1| conserved hypothetical protein [... 442 2e-122 gi|342860724|ref|ZP_08717374.1| hypothetical protein MCOL_17673 ... 429 2e-118 gi|126435539|ref|YP_001071230.1| hypothetical protein Mjls_2960 ... 374 8e-102 gi|120404259|ref|YP_954088.1| hypothetical protein Mvan_3284 [My... 374 1e-101 gi|145224087|ref|YP_001134765.1| hypothetical protein Mflv_3503 ... 374 1e-101 gi|108799911|ref|YP_640108.1| hypothetical protein Mmcs_2945 [My... 374 1e-101 gi|289753788|ref|ZP_06513166.1| conserved hypothetical protein [... 371 8e-101 gi|254821092|ref|ZP_05226093.1| hypothetical protein MintA_14242... 371 9e-101 gi|333990494|ref|YP_004523108.1| hypothetical protein JDM601_185... 347 2e-93 gi|169629449|ref|YP_001703098.1| hypothetical protein MAB_2363 [... 316 4e-84 gi|226306750|ref|YP_002766710.1| channel protein [Rhodococcus er... 257 1e-66 gi|229494822|ref|ZP_04388576.1| conserved hypothetical protein [... 255 5e-66 gi|312139853|ref|YP_004007189.1| hypothetical protein REQ_24680 ... 239 5e-61 gi|226360079|ref|YP_002777857.1| channel protein [Rhodococcus op... 231 1e-58 gi|325674270|ref|ZP_08153959.1| hypothetical protein HMPREF0724_... 230 2e-58 gi|111017949|ref|YP_700921.1| hypothetical protein RHA1_ro00932 ... 229 4e-58 gi|326384764|ref|ZP_08206441.1| hypothetical protein SCNU_17570 ... 223 4e-56 gi|54023972|ref|YP_118214.1| hypothetical protein nfa20040 [Noca... 204 2e-50 gi|302528020|ref|ZP_07280362.1| predicted protein [Streptomyces ... 189 6e-46 gi|262202723|ref|YP_003273931.1| hypothetical protein Gbro_2824 ... 189 6e-46 gi|300787873|ref|YP_003768164.1| hypothetical protein AMED_6021 ... 187 2e-45 gi|467144|gb|AAA50908.1| unknown [Mycobacterium leprae] 183 4e-44 gi|343928402|ref|ZP_08767850.1| putative channel protein [Gordon... 175 9e-42 gi|333919198|ref|YP_004492779.1| hypothetical protein AS9A_1528 ... 167 2e-39 gi|331697600|ref|YP_004333839.1| hypothetical protein Psed_3816 ... 163 3e-38 gi|134101750|ref|YP_001107411.1| hypothetical protein SACE_5246 ... 162 5e-38 gi|256379441|ref|YP_003103101.1| hypothetical protein Amir_5436 ... 144 2e-32 gi|296140080|ref|YP_003647323.1| channel protein [Tsukamurella p... 143 3e-32 gi|300781245|ref|ZP_07091099.1| conserved hypothetical protein [... 140 2e-31 gi|337290646|ref|YP_004629667.1| hypothetical protein CULC22_010... 136 4e-30 gi|334696759|gb|AEG81556.1| putative secreted protein [Corynebac... 134 1e-29 gi|38233774|ref|NP_939541.1| hypothetical protein DIP1184 [Coryn... 129 8e-28 gi|258654193|ref|YP_003203349.1| hypothetical protein Namu_4070 ... 128 1e-27 gi|302206101|gb|ADL10443.1| Hypothetical protein CpC231_0965 [Co... 127 3e-27 gi|300858387|ref|YP_003783370.1| hypothetical protein cpfrc_0096... 126 4e-27 gi|284991433|ref|YP_003409987.1| hypothetical protein Gobs_3006 ... 125 7e-27 gi|296394931|ref|YP_003659815.1| hypothetical protein Srot_2547 ... 120 4e-25 gi|336325522|ref|YP_004605488.1| hypothetical protein CRES_0968 ... 117 3e-24 gi|68535947|ref|YP_250652.1| putative secreted protein [Coryneba... 116 4e-24 >gi|15608836|ref|NP_216214.1| hypothetical protein Rv1698 [Mycobacterium tuberculosis H37Rv] gi|31792884|ref|NP_855377.1| hypothetical protein Mb1724 [Mycobacterium bovis AF2122/97] gi|121637605|ref|YP_977828.1| hypothetical protein BCG_1736 [Mycobacterium bovis BCG str. Pasteur 1173P2] 70 more sequence titles Length=314 Score = 616 bits (1589), Expect = 1e-174, Method: Compositional matrix adjust. Identities = 314/314 (100%), Positives = 314/314 (100%), Gaps = 0/314 (0%) Query 1 MISLRQHAVSLAAVFLALAMGVVLGSGFFSDTLLSSLRSEKRDLYTQIDRLTDQRDALRE 60 MISLRQHAVSLAAVFLALAMGVVLGSGFFSDTLLSSLRSEKRDLYTQIDRLTDQRDALRE Sbjct 1 MISLRQHAVSLAAVFLALAMGVVLGSGFFSDTLLSSLRSEKRDLYTQIDRLTDQRDALRE 60 Query 61 KLSAADNFDIQVGSRIVHDALVGKSVVIFRTPDAHDDDIAAVSKIVGQAGGAVTATVSLT 120 KLSAADNFDIQVGSRIVHDALVGKSVVIFRTPDAHDDDIAAVSKIVGQAGGAVTATVSLT Sbjct 61 KLSAADNFDIQVGSRIVHDALVGKSVVIFRTPDAHDDDIAAVSKIVGQAGGAVTATVSLT 120 Query 121 QEFVEANSAEKLRSVVNSSILPAGSQLSTKLVDQGSQAGDLLGIALLSNADPAAPTVEQA 180 QEFVEANSAEKLRSVVNSSILPAGSQLSTKLVDQGSQAGDLLGIALLSNADPAAPTVEQA Sbjct 121 QEFVEANSAEKLRSVVNSSILPAGSQLSTKLVDQGSQAGDLLGIALLSNADPAAPTVEQA 180 Query 181 QRDTVLAALRETGFITYQPRDRIGTANATVVVTGGALSTDAGNQGVSVARFAAALAPRGS 240 QRDTVLAALRETGFITYQPRDRIGTANATVVVTGGALSTDAGNQGVSVARFAAALAPRGS Sbjct 181 QRDTVLAALRETGFITYQPRDRIGTANATVVVTGGALSTDAGNQGVSVARFAAALAPRGS 240 Query 241 GTLLAGRDGSANRPAAVAVTRADADMAAEISTVDDIDAEPGRITVILALHDLINGGHVGH 300 GTLLAGRDGSANRPAAVAVTRADADMAAEISTVDDIDAEPGRITVILALHDLINGGHVGH Sbjct 241 GTLLAGRDGSANRPAAVAVTRADADMAAEISTVDDIDAEPGRITVILALHDLINGGHVGH 300 Query 301 YGTGHGAMSVTVSQ 314 YGTGHGAMSVTVSQ Sbjct 301 YGTGHGAMSVTVSQ 314 >gi|15841155|ref|NP_336192.1| hypothetical protein MT1737 [Mycobacterium tuberculosis CDC1551] gi|254364537|ref|ZP_04980583.1| conserved hypothetical protein [Mycobacterium tuberculosis str. Haarlem] gi|13881375|gb|AAK46006.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551] gi|134150051|gb|EBA42096.1| conserved hypothetical protein [Mycobacterium tuberculosis str. Haarlem] Length=319 Score = 615 bits (1585), Expect = 3e-174, Method: Compositional matrix adjust. Identities = 314/314 (100%), Positives = 314/314 (100%), Gaps = 0/314 (0%) Query 1 MISLRQHAVSLAAVFLALAMGVVLGSGFFSDTLLSSLRSEKRDLYTQIDRLTDQRDALRE 60 MISLRQHAVSLAAVFLALAMGVVLGSGFFSDTLLSSLRSEKRDLYTQIDRLTDQRDALRE Sbjct 6 MISLRQHAVSLAAVFLALAMGVVLGSGFFSDTLLSSLRSEKRDLYTQIDRLTDQRDALRE 65 Query 61 KLSAADNFDIQVGSRIVHDALVGKSVVIFRTPDAHDDDIAAVSKIVGQAGGAVTATVSLT 120 KLSAADNFDIQVGSRIVHDALVGKSVVIFRTPDAHDDDIAAVSKIVGQAGGAVTATVSLT Sbjct 66 KLSAADNFDIQVGSRIVHDALVGKSVVIFRTPDAHDDDIAAVSKIVGQAGGAVTATVSLT 125 Query 121 QEFVEANSAEKLRSVVNSSILPAGSQLSTKLVDQGSQAGDLLGIALLSNADPAAPTVEQA 180 QEFVEANSAEKLRSVVNSSILPAGSQLSTKLVDQGSQAGDLLGIALLSNADPAAPTVEQA Sbjct 126 QEFVEANSAEKLRSVVNSSILPAGSQLSTKLVDQGSQAGDLLGIALLSNADPAAPTVEQA 185 Query 181 QRDTVLAALRETGFITYQPRDRIGTANATVVVTGGALSTDAGNQGVSVARFAAALAPRGS 240 QRDTVLAALRETGFITYQPRDRIGTANATVVVTGGALSTDAGNQGVSVARFAAALAPRGS Sbjct 186 QRDTVLAALRETGFITYQPRDRIGTANATVVVTGGALSTDAGNQGVSVARFAAALAPRGS 245 Query 241 GTLLAGRDGSANRPAAVAVTRADADMAAEISTVDDIDAEPGRITVILALHDLINGGHVGH 300 GTLLAGRDGSANRPAAVAVTRADADMAAEISTVDDIDAEPGRITVILALHDLINGGHVGH Sbjct 246 GTLLAGRDGSANRPAAVAVTRADADMAAEISTVDDIDAEPGRITVILALHDLINGGHVGH 305 Query 301 YGTGHGAMSVTVSQ 314 YGTGHGAMSVTVSQ Sbjct 306 YGTGHGAMSVTVSQ 319 >gi|340626703|ref|YP_004745155.1| hypothetical protein MCAN_17071 [Mycobacterium canettii CIPT 140010059] gi|340004893|emb|CCC44039.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059] Length=314 Score = 614 bits (1584), Expect = 4e-174, Method: Compositional matrix adjust. Identities = 313/314 (99%), Positives = 313/314 (99%), Gaps = 0/314 (0%) Query 1 MISLRQHAVSLAAVFLALAMGVVLGSGFFSDTLLSSLRSEKRDLYTQIDRLTDQRDALRE 60 MISLRQHAVSLAAVFLALAMGVVLGSGFFSDTLLSSLRSEKRDLYTQIDRLTDQRDALRE Sbjct 1 MISLRQHAVSLAAVFLALAMGVVLGSGFFSDTLLSSLRSEKRDLYTQIDRLTDQRDALRE 60 Query 61 KLSAADNFDIQVGSRIVHDALVGKSVVIFRTPDAHDDDIAAVSKIVGQAGGAVTATVSLT 120 KLSAADNFDIQVGSRIVHDALVGKSVVIFRTPDAHDDDIAAVSKIVGQAGGAVTATVSLT Sbjct 61 KLSAADNFDIQVGSRIVHDALVGKSVVIFRTPDAHDDDIAAVSKIVGQAGGAVTATVSLT 120 Query 121 QEFVEANSAEKLRSVVNSSILPAGSQLSTKLVDQGSQAGDLLGIALLSNADPAAPTVEQA 180 QEFVEANSAEKLRSVVNSSILPAGSQLSTKLVDQGSQAGDLLGIALLSNADPAAPTVEQA Sbjct 121 QEFVEANSAEKLRSVVNSSILPAGSQLSTKLVDQGSQAGDLLGIALLSNADPAAPTVEQA 180 Query 181 QRDTVLAALRETGFITYQPRDRIGTANATVVVTGGALSTDAGNQGVSVARFAAALAPRGS 240 QRDTVLAALRETGFITYQPRDRIGTANA VVVTGGALSTDAGNQGVSVARFAAALAPRGS Sbjct 181 QRDTVLAALRETGFITYQPRDRIGTANAAVVVTGGALSTDAGNQGVSVARFAAALAPRGS 240 Query 241 GTLLAGRDGSANRPAAVAVTRADADMAAEISTVDDIDAEPGRITVILALHDLINGGHVGH 300 GTLLAGRDGSANRPAAVAVTRADADMAAEISTVDDIDAEPGRITVILALHDLINGGHVGH Sbjct 241 GTLLAGRDGSANRPAAVAVTRADADMAAEISTVDDIDAEPGRITVILALHDLINGGHVGH 300 Query 301 YGTGHGAMSVTVSQ 314 YGTGHGAMSVTVSQ Sbjct 301 YGTGHGAMSVTVSQ 314 >gi|289447312|ref|ZP_06437056.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A] gi|289420270|gb|EFD17471.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A] Length=314 Score = 614 bits (1583), Expect = 6e-174, Method: Compositional matrix adjust. Identities = 313/314 (99%), Positives = 314/314 (100%), Gaps = 0/314 (0%) Query 1 MISLRQHAVSLAAVFLALAMGVVLGSGFFSDTLLSSLRSEKRDLYTQIDRLTDQRDALRE 60 MISLRQHAVSLAAVFLALAMGVVLGSGFFSDTLLSSLRSEKRDLYTQIDRLTDQRDALRE Sbjct 1 MISLRQHAVSLAAVFLALAMGVVLGSGFFSDTLLSSLRSEKRDLYTQIDRLTDQRDALRE 60 Query 61 KLSAADNFDIQVGSRIVHDALVGKSVVIFRTPDAHDDDIAAVSKIVGQAGGAVTATVSLT 120 KLSAADNFDIQVGSRIVHDALVGKSVVIFRTPDAHDDDIAAVSKIVGQAGGAVTATVSLT Sbjct 61 KLSAADNFDIQVGSRIVHDALVGKSVVIFRTPDAHDDDIAAVSKIVGQAGGAVTATVSLT 120 Query 121 QEFVEANSAEKLRSVVNSSILPAGSQLSTKLVDQGSQAGDLLGIALLSNADPAAPTVEQA 180 QEFVEANSAEKLRSVVNSSILPAGSQLSTKLVDQGSQAGDLLGIALLSNADPAAPTVEQA Sbjct 121 QEFVEANSAEKLRSVVNSSILPAGSQLSTKLVDQGSQAGDLLGIALLSNADPAAPTVEQA 180 Query 181 QRDTVLAALRETGFITYQPRDRIGTANATVVVTGGALSTDAGNQGVSVARFAAALAPRGS 240 QRDTVLAALRETGFITYQPRDRIGTANATVVVTGGALSTDAGNQGVSVARFAAALAPRGS Sbjct 181 QRDTVLAALRETGFITYQPRDRIGTANATVVVTGGALSTDAGNQGVSVARFAAALAPRGS 240 Query 241 GTLLAGRDGSANRPAAVAVTRADADMAAEISTVDDIDAEPGRITVILALHDLINGGHVGH 300 GTLLAGRDGSANRPAAVAVTRADADMAAEISTVDDIDAEPGRITVILALHDLINGG+VGH Sbjct 241 GTLLAGRDGSANRPAAVAVTRADADMAAEISTVDDIDAEPGRITVILALHDLINGGYVGH 300 Query 301 YGTGHGAMSVTVSQ 314 YGTGHGAMSVTVSQ Sbjct 301 YGTGHGAMSVTVSQ 314 >gi|240170147|ref|ZP_04748806.1| hypothetical protein MkanA1_12593 [Mycobacterium kansasii ATCC 12478] Length=317 Score = 476 bits (1226), Expect = 2e-132, Method: Compositional matrix adjust. Identities = 256/317 (81%), Positives = 273/317 (87%), Gaps = 3/317 (0%) Query 1 MISLRQHAVSLAAVFLALAMGVVLGSGFFSDTLLSSLRSEKRDLYTQIDRLTDQRDALRE 60 MISLRQHA+SLAAVFLALA+GVVLGSGFFSDTLLSSLR+EKRDL QI L DQR+AL E Sbjct 1 MISLRQHAISLAAVFLALAIGVVLGSGFFSDTLLSSLRNEKRDLAAQISGLNDQRNALNE 60 Query 61 KLSAADNFDIQVGSRIVHDALVGKSVVIFRTPDAHDDDIAAVSKIVGQAGGAVTATVSLT 120 KLSAA+ FD QV RIVHDAL GK+VVIFRTPDA DDD+A VSKIVGQAGG+VT TVSLT Sbjct 61 KLSAANTFDNQVLGRIVHDALAGKAVVIFRTPDAKDDDVAMVSKIVGQAGGSVTGTVSLT 120 Query 121 QEFVEANSAEKLRSVVNSSILPAGSQLSTKLVDQGSQAGDLLGIALLS---NADPAAPTV 177 QEFVEANSAEKLRSVVNSSILPAG+QLSTKLVDQGSQAGDLLGIALLS A+P AP V Sbjct 121 QEFVEANSAEKLRSVVNSSILPAGTQLSTKLVDQGSQAGDLLGIALLSPVNPANPPAPPV 180 Query 178 EQAQRDTVLAALRETGFITYQPRDRIGTANATVVVTGGALSTDAGNQGVSVARFAAALAP 237 + AQRDTVLAALRETGFITY P D G ANA +V+TGG L DAGNQG SVARFAAALAP Sbjct 181 DDAQRDTVLAALRETGFITYPPADHFGVANAAIVITGGGLPADAGNQGASVARFAAALAP 240 Query 238 RGSGTLLAGRDGSANRPAAVAVTRADADMAAEISTVDDIDAEPGRITVILALHDLINGGH 297 GSGT+LAGRDGS+ AAVAVTRADA MAA +STVDD+DA PGRIT ILALHDLINGG Sbjct 241 HGSGTVLAGRDGSSTGSAAVAVTRADAGMAATVSTVDDVDAAPGRITAILALHDLINGGR 300 Query 298 VGHYGTGHGAMSVTVSQ 314 HYGTGHGA SVTV Q Sbjct 301 PAHYGTGHGATSVTVPQ 317 >gi|118462831|ref|YP_882257.1| hypothetical protein MAV_3073 [Mycobacterium avium 104] gi|254775525|ref|ZP_05217041.1| hypothetical protein MaviaA2_12771 [Mycobacterium avium subsp. avium ATCC 25291] gi|118164118|gb|ABK65015.1| conserved hypothetical protein [Mycobacterium avium 104] Length=317 Score = 475 bits (1222), Expect = 5e-132, Method: Compositional matrix adjust. Identities = 240/317 (76%), Positives = 273/317 (87%), Gaps = 3/317 (0%) Query 1 MISLRQHAVSLAAVFLALAMGVVLGSGFFSDTLLSSLRSEKRDLYTQIDRLTDQRDALRE 60 MISLRQHA+SLAAVFLALA+GVVLGSGF SDTLLSSLR EKRDL+TQI+ L DQ++ L E Sbjct 1 MISLRQHALSLAAVFLALAVGVVLGSGFLSDTLLSSLRDEKRDLHTQINGLNDQKNVLNE 60 Query 61 KLSAADNFDIQVGSRIVHDALVGKSVVIFRTPDAHDDDIAAVSKIVGQAGGAVTATVSLT 120 KLSAA+NFD Q+ R++HDAL GKSVV+FRTPDA DDD+AAVSK +GQAGG VT TV+LT Sbjct 61 KLSAANNFDTQLAGRMLHDALGGKSVVVFRTPDAKDDDVAAVSKFIGQAGGTVTTTVALT 120 Query 121 QEFVEANSAEKLRSVVNSSILPAGSQLSTKLVDQGSQAGDLLGIALLSNADPAAPT---V 177 QEFVEANSAEKL++VVNSS+LPAG QLSTKLVDQGSQAGDL+GIALL+NA PA P V Sbjct 121 QEFVEANSAEKLQTVVNSSVLPAGQQLSTKLVDQGSQAGDLMGIALLTNATPAGPPPPEV 180 Query 178 EQAQRDTVLAALRETGFITYQPRDRIGTANATVVVTGGALSTDAGNQGVSVARFAAALAP 237 + QR+TVLAALR+TGFITYQ D +G ANA +VVTGGAL DAGNQGVSVARF+AALAP Sbjct 181 SETQRNTVLAALRDTGFITYQGGDHLGAANAALVVTGGALPQDAGNQGVSVARFSAALAP 240 Query 238 RGSGTLLAGRDGSANRPAAVAVTRADADMAAEISTVDDIDAEPGRITVILALHDLINGGH 297 GS TLLAGRDGSA AAVAVTRADA M + +STVD++DA PGRIT +L LHDL+NGGH Sbjct 241 HGSATLLAGRDGSATGSAAVAVTRADAGMNSAVSTVDNVDAAPGRITAVLGLHDLMNGGH 300 Query 298 VGHYGTGHGAMSVTVSQ 314 G YGTGHGA S+TV+Q Sbjct 301 PGQYGTGHGATSITVAQ 317 >gi|183982518|ref|YP_001850809.1| hypothetical protein MMAR_2503 [Mycobacterium marinum M] gi|183175844|gb|ACC40954.1| conserved hypothetical protein [Mycobacterium marinum M] Length=317 Score = 474 bits (1219), Expect = 1e-131, Method: Compositional matrix adjust. Identities = 253/317 (80%), Positives = 277/317 (88%), Gaps = 3/317 (0%) Query 1 MISLRQHAVSLAAVFLALAMGVVLGSGFFSDTLLSSLRSEKRDLYTQIDRLTDQRDALRE 60 MISLRQHA+SLAAVFLALA+GVVLGSGFFSDTLLSSLR+EKRDLYTQI L DQR+AL E Sbjct 1 MISLRQHAISLAAVFLALAIGVVLGSGFFSDTLLSSLRNEKRDLYTQIGTLNDQRNALNE 60 Query 61 KLSAADNFDIQVGSRIVHDALVGKSVVIFRTPDAHDDDIAAVSKIVGQAGGAVTATVSLT 120 KLSAA++FD Q+ RIVHDAL GKSV+IFRTPDA DDD+AAV+KIV QAGG+V TVSLT Sbjct 61 KLSAANDFDNQMLGRIVHDALAGKSVIIFRTPDASDDDVAAVTKIVAQAGGSVPGTVSLT 120 Query 121 QEFVEANSAEKLRSVVNSSILPAGSQLSTKLVDQGSQAGDLLGIALLSNADP---AAPTV 177 QEFVEANSAEKLRSVV+S++LP G+QLSTKLVDQGSQAGDLLGIALL++A P A P V Sbjct 121 QEFVEANSAEKLRSVVDSTVLPPGTQLSTKLVDQGSQAGDLLGIALLTSAKPDPAAGPGV 180 Query 178 EQAQRDTVLAALRETGFITYQPRDRIGTANATVVVTGGALSTDAGNQGVSVARFAAALAP 237 + AQRDTVL ALRETGFITYQP D IG ANA +V+TGGAL DAGNQG SVARFAAALAP Sbjct 181 DDAQRDTVLGALRETGFITYQPSDHIGAANAAIVITGGALPADAGNQGASVARFAAALAP 240 Query 238 RGSGTLLAGRDGSANRPAAVAVTRADADMAAEISTVDDIDAEPGRITVILALHDLINGGH 297 GSGT+LAGRDGS+ AAVAV RADA MAA ISTVDD+DA PGRIT ILALHDLINGGH Sbjct 241 HGSGTVLAGRDGSSTGAAAVAVARADAGMAATISTVDDVDAAPGRITTILALHDLINGGH 300 Query 298 VGHYGTGHGAMSVTVSQ 314 G YGTGHGA SVTV+Q Sbjct 301 PGQYGTGHGATSVTVAQ 317 >gi|118617315|ref|YP_905647.1| hypothetical protein MUL_1687 [Mycobacterium ulcerans Agy99] gi|118569425|gb|ABL04176.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99] Length=317 Score = 472 bits (1214), Expect = 4e-131, Method: Compositional matrix adjust. Identities = 252/317 (80%), Positives = 276/317 (88%), Gaps = 3/317 (0%) Query 1 MISLRQHAVSLAAVFLALAMGVVLGSGFFSDTLLSSLRSEKRDLYTQIDRLTDQRDALRE 60 MISLRQHA+SLAAVFLALA+GVVLGSGFFSDTLLSSLR+EKRDLYTQI L DQR+AL E Sbjct 1 MISLRQHAISLAAVFLALAIGVVLGSGFFSDTLLSSLRNEKRDLYTQIGTLNDQRNALNE 60 Query 61 KLSAADNFDIQVGSRIVHDALVGKSVVIFRTPDAHDDDIAAVSKIVGQAGGAVTATVSLT 120 KL AA++FD Q+ RIVHDAL GKSV+IFRTPDA DDD+AAV+KIV QAGG+V TVSLT Sbjct 61 KLRAANDFDNQMLGRIVHDALAGKSVIIFRTPDASDDDVAAVTKIVAQAGGSVPGTVSLT 120 Query 121 QEFVEANSAEKLRSVVNSSILPAGSQLSTKLVDQGSQAGDLLGIALLSNADP---AAPTV 177 QEFVEANSAEKLRSVV+S++LP G+QLSTKLVDQGSQAGDLLGIALL++A P A P V Sbjct 121 QEFVEANSAEKLRSVVDSTVLPPGTQLSTKLVDQGSQAGDLLGIALLTSAKPDPAAGPGV 180 Query 178 EQAQRDTVLAALRETGFITYQPRDRIGTANATVVVTGGALSTDAGNQGVSVARFAAALAP 237 + AQRDTVL ALRETGFITYQP D IG ANA +V+TGGAL DAGNQG SVARFAAALAP Sbjct 181 DDAQRDTVLGALRETGFITYQPSDHIGAANAVIVITGGALPADAGNQGASVARFAAALAP 240 Query 238 RGSGTLLAGRDGSANRPAAVAVTRADADMAAEISTVDDIDAEPGRITVILALHDLINGGH 297 GSGT+LAGRDGS+ AAVAV RADA MAA ISTVDD+DA PGRIT ILALHDLINGGH Sbjct 241 HGSGTVLAGRDGSSTGAAAVAVARADAGMAATISTVDDVDAAPGRITTILALHDLINGGH 300 Query 298 VGHYGTGHGAMSVTVSQ 314 G YGTGHGA SVTV+Q Sbjct 301 PGQYGTGHGATSVTVAQ 317 >gi|41407503|ref|NP_960339.1| hypothetical protein MAP1405 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395856|gb|AAS03722.1| hypothetical protein MAP_1405 [Mycobacterium avium subsp. paratuberculosis K-10] gi|336457857|gb|EGO36851.1| Protein of unknown function (DUF3186) [Mycobacterium avium subsp. paratuberculosis S397] Length=317 Score = 470 bits (1209), Expect = 2e-130, Method: Compositional matrix adjust. Identities = 237/317 (75%), Positives = 271/317 (86%), Gaps = 3/317 (0%) Query 1 MISLRQHAVSLAAVFLALAMGVVLGSGFFSDTLLSSLRSEKRDLYTQIDRLTDQRDALRE 60 MISLRQHA+SLAAVFLALA+GVVLGSGF SDTLLSSLR EKRDL+TQI+ L DQ++ L E Sbjct 1 MISLRQHALSLAAVFLALAVGVVLGSGFLSDTLLSSLRDEKRDLHTQINGLNDQKNVLNE 60 Query 61 KLSAADNFDIQVGSRIVHDALVGKSVVIFRTPDAHDDDIAAVSKIVGQAGGAVTATVSLT 120 KLSAA+NFD Q+ R++HDAL GKSVV+FRTPDA DDD+A VSK + QAGG VT TV+LT Sbjct 61 KLSAANNFDTQLAGRMLHDALGGKSVVVFRTPDAKDDDVAGVSKFIAQAGGTVTTTVALT 120 Query 121 QEFVEANSAEKLRSVVNSSILPAGSQLSTKLVDQGSQAGDLLGIALLSNADPAAPT---V 177 QEFVEANSAEKL++VVNSS+LPAG QLSTKLVDQGSQAGDL+GIALL+NA PA P V Sbjct 121 QEFVEANSAEKLQTVVNSSVLPAGQQLSTKLVDQGSQAGDLMGIALLTNATPAGPPPPEV 180 Query 178 EQAQRDTVLAALRETGFITYQPRDRIGTANATVVVTGGALSTDAGNQGVSVARFAAALAP 237 + QR+TVLAALR+TGFITYQ D +G ANA +VVTGGAL DAGNQGVSVARF+AALAP Sbjct 181 SETQRNTVLAALRDTGFITYQGGDHLGAANAALVVTGGALPQDAGNQGVSVARFSAALAP 240 Query 238 RGSGTLLAGRDGSANRPAAVAVTRADADMAAEISTVDDIDAEPGRITVILALHDLINGGH 297 GS TLLAGRDGSA AAVAVTRAD+ M + +STVD++DA PGRIT +L LHDL+NGGH Sbjct 241 HGSATLLAGRDGSATGSAAVAVTRADSGMNSAVSTVDNVDAAPGRITAVLGLHDLMNGGH 300 Query 298 VGHYGTGHGAMSVTVSQ 314 G YGTGHGA S+TV+Q Sbjct 301 PGQYGTGHGATSITVAQ 317 >gi|289750254|ref|ZP_06509632.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] gi|289690841|gb|EFD58270.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] Length=259 Score = 467 bits (1202), Expect = 9e-130, Method: Compositional matrix adjust. Identities = 239/239 (100%), Positives = 239/239 (100%), Gaps = 0/239 (0%) Query 1 MISLRQHAVSLAAVFLALAMGVVLGSGFFSDTLLSSLRSEKRDLYTQIDRLTDQRDALRE 60 MISLRQHAVSLAAVFLALAMGVVLGSGFFSDTLLSSLRSEKRDLYTQIDRLTDQRDALRE Sbjct 1 MISLRQHAVSLAAVFLALAMGVVLGSGFFSDTLLSSLRSEKRDLYTQIDRLTDQRDALRE 60 Query 61 KLSAADNFDIQVGSRIVHDALVGKSVVIFRTPDAHDDDIAAVSKIVGQAGGAVTATVSLT 120 KLSAADNFDIQVGSRIVHDALVGKSVVIFRTPDAHDDDIAAVSKIVGQAGGAVTATVSLT Sbjct 61 KLSAADNFDIQVGSRIVHDALVGKSVVIFRTPDAHDDDIAAVSKIVGQAGGAVTATVSLT 120 Query 121 QEFVEANSAEKLRSVVNSSILPAGSQLSTKLVDQGSQAGDLLGIALLSNADPAAPTVEQA 180 QEFVEANSAEKLRSVVNSSILPAGSQLSTKLVDQGSQAGDLLGIALLSNADPAAPTVEQA Sbjct 121 QEFVEANSAEKLRSVVNSSILPAGSQLSTKLVDQGSQAGDLLGIALLSNADPAAPTVEQA 180 Query 181 QRDTVLAALRETGFITYQPRDRIGTANATVVVTGGALSTDAGNQGVSVARFAAALAPRG 239 QRDTVLAALRETGFITYQPRDRIGTANATVVVTGGALSTDAGNQGVSVARFAAALAPRG Sbjct 181 QRDTVLAALRETGFITYQPRDRIGTANATVVVTGGALSTDAGNQGVSVARFAAALAPRG 239 >gi|15827709|ref|NP_301972.1| hypothetical protein ML1362 [Mycobacterium leprae TN] gi|221230186|ref|YP_002503602.1| putative conserved secreted protein [Mycobacterium leprae Br4923] gi|14916923|sp|Q49894.2|OMP1_MYCLE RecName: Full=Probable channel-forming protein ML1362; Flags: Precursor gi|2065221|emb|CAB08274.1| unnamed protein product [Mycobacterium leprae] gi|13093260|emb|CAC31743.1| possible conserved secreted protein [Mycobacterium leprae] gi|219933293|emb|CAR71457.1| possible conserved secreted protein [Mycobacterium leprae Br4923] Length=317 Score = 449 bits (1156), Expect = 2e-124, Method: Compositional matrix adjust. Identities = 244/317 (77%), Positives = 266/317 (84%), Gaps = 3/317 (0%) Query 1 MISLRQHAVSLAAVFLALAMGVVLGSGFFSDTLLSSLRSEKRDLYTQIDRLTDQRDALRE 60 MISLRQHA SLAAVFLALA+GVVLGSGF SDTLLSSLR EKRDLYTQI L DQ++ L E Sbjct 1 MISLRQHAFSLAAVFLALAVGVVLGSGFLSDTLLSSLRDEKRDLYTQISGLNDQKNMLNE 60 Query 61 KLSAADNFDIQVGSRIVHDALVGKSVVIFRTPDAHDDDIAAVSKIVGQAGGAVTATVSLT 120 K+SAA+NFD Q+ RIVHD L G SVV+FRTPDA DDD+AAVSKIV QAGG VT TVSLT Sbjct 61 KVSAANNFDNQLLGRIVHDVLGGTSVVVFRTPDAKDDDVAAVSKIVVQAGGTVTGTVSLT 120 Query 121 QEFVEANSAEKLRSVVNSSILPAGSQLSTKLVDQGSQAGDLLGIALLSNADPAAPTVEQA 180 QEFV+ANS EKLRSVVNSSILPAG+QLSTKLVDQGSQAGDLLGI LL NA+PA P V A Sbjct 121 QEFVDANSTEKLRSVVNSSILPAGAQLSTKLVDQGSQAGDLLGITLLVNANPAVPNVGDA 180 Query 181 QRDTVLAALRETGFITYQPRDR---IGTANATVVVTGGALSTDAGNQGVSVARFAAALAP 237 QR TVL ALR+TGFITYQ +R +G ANA +V+TGG L DAGNQGVSVARF+AALAP Sbjct 181 QRSTVLVALRDTGFITYQTYNRNDHLGAANAALVITGGLLPQDAGNQGVSVARFSAALAP 240 Query 238 RGSGTLLAGRDGSANRPAAVAVTRADADMAAEISTVDDIDAEPGRITVILALHDLINGGH 297 GSGTLLAGRDGSA AAVAV RADA MAA ISTVD++DAEPGRIT IL LHDL++GGH Sbjct 241 HGSGTLLAGRDGSATGVAAVAVARADAGMAATISTVDNVDAEPGRITAILGLHDLLSGGH 300 Query 298 VGHYGTGHGAMSVTVSQ 314 G YG GHGA S+TV Q Sbjct 301 TGQYGVGHGATSITVPQ 317 >gi|296164598|ref|ZP_06847165.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295900017|gb|EFG79456.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=314 Score = 442 bits (1138), Expect = 2e-122, Method: Compositional matrix adjust. Identities = 239/314 (77%), Positives = 274/314 (88%), Gaps = 0/314 (0%) Query 1 MISLRQHAVSLAAVFLALAMGVVLGSGFFSDTLLSSLRSEKRDLYTQIDRLTDQRDALRE 60 MISLRQHA+SLAAVFLALA+GVVLGSG SDTLLSSLR EKRDL+TQI+ L DQ++ L E Sbjct 1 MISLRQHALSLAAVFLALAVGVVLGSGLLSDTLLSSLRDEKRDLHTQINGLNDQKNVLNE 60 Query 61 KLSAADNFDIQVGSRIVHDALVGKSVVIFRTPDAHDDDIAAVSKIVGQAGGAVTATVSLT 120 KL+AA++FD Q+ R++HDAL GKSVV+FRTPDAHDDD+AAV+K +GQAGGAVT TVSLT Sbjct 61 KLTAANSFDTQLAGRMLHDALGGKSVVVFRTPDAHDDDVAAVTKFIGQAGGAVTGTVSLT 120 Query 121 QEFVEANSAEKLRSVVNSSILPAGSQLSTKLVDQGSQAGDLLGIALLSNADPAAPTVEQA 180 EFVEANSAEKL++VVNSSILPAG QLSTKLVDQGSQAGDL+GIALL NA+PA P E+A Sbjct 121 NEFVEANSAEKLQTVVNSSILPAGQQLSTKLVDQGSQAGDLMGIALLINANPAVPPAEEA 180 Query 181 QRDTVLAALRETGFITYQPRDRIGTANATVVVTGGALSTDAGNQGVSVARFAAALAPRGS 240 QRDTVLAALR+TGFITYQP + +G ANA ++VTGG+L DAGN+GVSVARFAAA+AP GS Sbjct 181 QRDTVLAALRDTGFITYQPAEHMGAANAALIVTGGSLPQDAGNRGVSVARFAAAMAPHGS 240 Query 241 GTLLAGRDGSANRPAAVAVTRADADMAAEISTVDDIDAEPGRITVILALHDLINGGHVGH 300 GTLLAGRDGSA AAVAVTRADA M + +STVDD+D PGRIT +L LHDL+NGGH G Sbjct 241 GTLLAGRDGSATGAAAVAVTRADAAMNSAVSTVDDVDTAPGRITAVLGLHDLVNGGHAGQ 300 Query 301 YGTGHGAMSVTVSQ 314 YGTGHGA S+TV Q Sbjct 301 YGTGHGATSITVPQ 314 >gi|342860724|ref|ZP_08717374.1| hypothetical protein MCOL_17673 [Mycobacterium colombiense CECT 3035] gi|342131748|gb|EGT85005.1| hypothetical protein MCOL_17673 [Mycobacterium colombiense CECT 3035] Length=314 Score = 429 bits (1104), Expect = 2e-118, Method: Compositional matrix adjust. Identities = 238/314 (76%), Positives = 268/314 (86%), Gaps = 0/314 (0%) Query 1 MISLRQHAVSLAAVFLALAMGVVLGSGFFSDTLLSSLRSEKRDLYTQIDRLTDQRDALRE 60 MISLRQHA+SLAAVFLALA+GVVLGSGF SDTLLSSLR EKRDL TQI L DQ++ L E Sbjct 1 MISLRQHALSLAAVFLALAVGVVLGSGFLSDTLLSSLRDEKRDLNTQISGLNDQKNVLNE 60 Query 61 KLSAADNFDIQVGSRIVHDALVGKSVVIFRTPDAHDDDIAAVSKIVGQAGGAVTATVSLT 120 KLSAA+NFD Q+ R++HDAL GK+VV+FRTPDA DDD+AAVSK +GQ GG VT TVSLT Sbjct 61 KLSAANNFDTQLAGRMLHDALAGKAVVVFRTPDATDDDVAAVSKFIGQGGGTVTGTVSLT 120 Query 121 QEFVEANSAEKLRSVVNSSILPAGSQLSTKLVDQGSQAGDLLGIALLSNADPAAPTVEQA 180 EFVEANSAEKL++VVNSS+LPAG QLSTKLVDQGSQAGDL+GIALL+NA+PA P V+ Sbjct 121 SEFVEANSAEKLQTVVNSSVLPAGQQLSTKLVDQGSQAGDLMGIALLANANPAVPPVDDV 180 Query 181 QRDTVLAALRETGFITYQPRDRIGTANATVVVTGGALSTDAGNQGVSVARFAAALAPRGS 240 R+TVLAALR+TGFITYQ D +G ANA +VVTGGAL DAGN+GVSVARF+AALAP GS Sbjct 181 ARNTVLAALRDTGFITYQATDHMGAANAALVVTGGALPGDAGNKGVSVARFSAALAPHGS 240 Query 241 GTLLAGRDGSANRPAAVAVTRADADMAAEISTVDDIDAEPGRITVILALHDLINGGHVGH 300 GTLLAGRDGSA AAVAVTRADA M + ISTVDD+DA PGRIT +L LHDL+ GGH G Sbjct 241 GTLLAGRDGSATGGAAVAVTRADAGMNSAISTVDDVDAAPGRITAVLGLHDLLGGGHAGQ 300 Query 301 YGTGHGAMSVTVSQ 314 YGTGHGA S+TV Q Sbjct 301 YGTGHGATSITVPQ 314 >gi|126435539|ref|YP_001071230.1| hypothetical protein Mjls_2960 [Mycobacterium sp. JLS] gi|126235339|gb|ABN98739.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=313 Score = 374 bits (961), Expect = 8e-102, Method: Compositional matrix adjust. Identities = 202/314 (65%), Positives = 246/314 (79%), Gaps = 1/314 (0%) Query 1 MISLRQHAVSLAAVFLALAMGVVLGSGFFSDTLLSSLRSEKRDLYTQIDRLTDQRDALRE 60 MISLR HA+SLAAVFLALA+GV LGSG S+T+LS L+ +K+DL QI+ LTD+++ L + Sbjct 1 MISLRAHAISLAAVFLALAIGVALGSGLLSNTVLSGLQDDKQDLQNQINSLTDEKNGLNQ 60 Query 61 KLSAADNFDIQVGSRIVHDALVGKSVVIFRTPDAHDDDIAAVSKIVGQAGGAVTATVSLT 120 +LSAA FD Q+ R++ D L GKSVV+FRTPDA DDD+ A+++ VGQAGG V+ TV+LT Sbjct 61 RLSAAGEFDAQIAPRVLRDTLGGKSVVLFRTPDAADDDVDALTRSVGQAGGTVSGTVTLT 120 Query 121 QEFVEANSAEKLRSVVNSSILPAGSQLSTKLVDQGSQAGDLLGIALLSNADPAAPTVEQA 180 QEFV+ANSAEKL SVVNS I+PAG QLST VDQGSQAGDLLGIALL N DPAAP V A Sbjct 121 QEFVDANSAEKLLSVVNSPIVPAGKQLSTAAVDQGSQAGDLLGIALLLNKDPAAPVVSDA 180 Query 181 QRDTVLAALRETGFITYQPRDRIGTANATVVVTGGALSTDAGNQGVSVARFAAALAPRGS 240 +RDTVL ALR+TGF+T+ D +G AN ++VTGGAL DAGN+G +VARFAA LA GS Sbjct 181 ERDTVLTALRDTGFLTFG-TDPVGAANTALIVTGGALGDDAGNRGATVARFAAGLAKHGS 239 Query 241 GTLLAGRDGSANRPAAVAVTRADADMAAEISTVDDIDAEPGRITVILALHDLINGGHVGH 300 GT+L GRDGSA+ AVAVTR+D + A +STVDD+D E GRIT +LAL DLI G G Sbjct 240 GTVLVGRDGSASGTGAVAVTRSDPALTAAVSTVDDVDTESGRITSVLALADLIGGARPGQ 299 Query 301 YGTGHGAMSVTVSQ 314 YG G GA +VT++Q Sbjct 300 YGVGQGAGAVTIAQ 313 >gi|120404259|ref|YP_954088.1| hypothetical protein Mvan_3284 [Mycobacterium vanbaalenii PYR-1] gi|119957077|gb|ABM14082.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=313 Score = 374 bits (960), Expect = 1e-101, Method: Compositional matrix adjust. Identities = 202/314 (65%), Positives = 245/314 (79%), Gaps = 1/314 (0%) Query 1 MISLRQHAVSLAAVFLALAMGVVLGSGFFSDTLLSSLRSEKRDLYTQIDRLTDQRDALRE 60 MISLR HA+SLAAVFLALA+G+ LGSG S+T+LS LR +K+D+ QID LT+ R+AL E Sbjct 1 MISLRSHAISLAAVFLALAIGIALGSGMLSNTVLSGLRDDKQDMRQQIDTLTEDRNALNE 60 Query 61 KLSAADNFDIQVGSRIVHDALVGKSVVIFRTPDAHDDDIAAVSKIVGQAGGAVTATVSLT 120 KLSAA +FD QV RI+ DAL KSVVIFRTPDA D+D+ ++++V QAGG VT ++ LT Sbjct 61 KLSAAGDFDAQVAPRILRDALADKSVVIFRTPDAADNDVDGLTRLVTQAGGTVTGSIGLT 120 Query 121 QEFVEANSAEKLRSVVNSSILPAGSQLSTKLVDQGSQAGDLLGIALLSNADPAAPTVEQA 180 Q+FV+ANSAEKL SVVNS I+PAG+QL+T VDQGSQAGDLLGI++L N DP V++ Sbjct 121 QQFVDANSAEKLLSVVNSPIVPAGAQLNTAAVDQGSQAGDLLGISVLINKDPKVAPVDET 180 Query 181 QRDTVLAALRETGFITYQPRDRIGTANATVVVTGGALSTDAGNQGVSVARFAAALAPRGS 240 QR TVLAALR+TGF+TY +RIG AN +VVTGG L DAGNQG +VARFAA LAP G+ Sbjct 181 QRGTVLAALRDTGFVTYG-TERIGAANTALVVTGGPLGEDAGNQGATVARFAAGLAPHGA 239 Query 241 GTLLAGRDGSANRPAAVAVTRADADMAAEISTVDDIDAEPGRITVILALHDLINGGHVGH 300 GT+L GRDGSA AAVAV R+DA ++ +STVDDID+E GRIT +LAL LINGG Sbjct 240 GTVLVGRDGSATGTAAVAVARSDAALSNAVSTVDDIDSESGRITSVLALSALINGGRPDR 299 Query 301 YGTGHGAMSVTVSQ 314 +G G GA SVTV Q Sbjct 300 FGIGPGATSVTVPQ 313 >gi|145224087|ref|YP_001134765.1| hypothetical protein Mflv_3503 [Mycobacterium gilvum PYR-GCK] gi|315444424|ref|YP_004077303.1| hypothetical protein Mspyr1_28420 [Mycobacterium sp. Spyr1] gi|145216573|gb|ABP45977.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK] gi|315262727|gb|ADT99468.1| hypothetical protein Mspyr1_28420 [Mycobacterium sp. Spyr1] Length=313 Score = 374 bits (960), Expect = 1e-101, Method: Compositional matrix adjust. Identities = 197/314 (63%), Positives = 243/314 (78%), Gaps = 1/314 (0%) Query 1 MISLRQHAVSLAAVFLALAMGVVLGSGFFSDTLLSSLRSEKRDLYTQIDRLTDQRDALRE 60 MISLR HA+SLAAVFLALA+GV LGSG S+T+LS LR +K ++ QID LTD R+AL E Sbjct 1 MISLRSHAISLAAVFLALAIGVALGSGLLSNTVLSGLRDDKTEMQQQIDTLTDNRNALNE 60 Query 61 KLSAADNFDIQVGSRIVHDALVGKSVVIFRTPDAHDDDIAAVSKIVGQAGGAVTATVSLT 120 KLSAAD+F+ Q+ RI+ ++L KSVVIFRTPD+ DDD+ + ++VG AGG+VT TV LT Sbjct 61 KLSAADDFNAQMAPRILQESLAKKSVVIFRTPDSADDDVDGLVRLVGDAGGSVTGTVGLT 120 Query 121 QEFVEANSAEKLRSVVNSSILPAGSQLSTKLVDQGSQAGDLLGIALLSNADPAAPTVEQA 180 QEFV+ANSAEKL SVVNS I+PAG+QLST VDQG QAGDLLGI+LL + DP A V A Sbjct 121 QEFVDANSAEKLLSVVNSPIVPAGAQLSTATVDQGFQAGDLLGISLLIDKDPRATPVGDA 180 Query 181 QRDTVLAALRETGFITYQPRDRIGTANATVVVTGGALSTDAGNQGVSVARFAAALAPRGS 240 +RDTVLAALR+TGF+TY +RIG A+ ++VTGG L DAGNQG +VARFA+ LA GS Sbjct 181 ERDTVLAALRDTGFLTYG-TERIGAADTALIVTGGPLGEDAGNQGSTVARFASGLARHGS 239 Query 241 GTLLAGRDGSANRPAAVAVTRADADMAAEISTVDDIDAEPGRITVILALHDLINGGHVGH 300 GT+L GR+GSA +AVAVTR+DA + +STVDD+D+E GRIT +LAL L+NG Sbjct 240 GTVLVGREGSATGTSAVAVTRSDAALKNAVSTVDDVDSESGRITSVLALSALVNGARPEQ 299 Query 301 YGTGHGAMSVTVSQ 314 +G G GA +VTV Q Sbjct 300 FGIGQGATAVTVPQ 313 >gi|108799911|ref|YP_640108.1| hypothetical protein Mmcs_2945 [Mycobacterium sp. MCS] gi|119869021|ref|YP_938973.1| hypothetical protein Mkms_2989 [Mycobacterium sp. KMS] gi|108770330|gb|ABG09052.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119695110|gb|ABL92183.1| conserved hypothetical protein [Mycobacterium sp. KMS] Length=313 Score = 374 bits (959), Expect = 1e-101, Method: Compositional matrix adjust. Identities = 201/314 (65%), Positives = 245/314 (79%), Gaps = 1/314 (0%) Query 1 MISLRQHAVSLAAVFLALAMGVVLGSGFFSDTLLSSLRSEKRDLYTQIDRLTDQRDALRE 60 MISLR HA+SLAAVFLALA+GV LGSG S+T+LS L+ +K+DL QI+ LTD+++ L + Sbjct 1 MISLRAHAISLAAVFLALAIGVALGSGLLSNTVLSGLQDDKQDLQNQINSLTDEKNGLNQ 60 Query 61 KLSAADNFDIQVGSRIVHDALVGKSVVIFRTPDAHDDDIAAVSKIVGQAGGAVTATVSLT 120 +LSAA FD Q+ R++ D L GKSVV+FRTPDA DDD+ A+++ VGQAGG V+ TV+LT Sbjct 61 RLSAAGEFDAQIAPRVLRDTLGGKSVVLFRTPDAADDDVDALTRSVGQAGGTVSGTVTLT 120 Query 121 QEFVEANSAEKLRSVVNSSILPAGSQLSTKLVDQGSQAGDLLGIALLSNADPAAPTVEQA 180 QEFV+ANSAEKL SVVNS I+PAG QLST VDQGSQAGDLLGIALL N DPAAP V A Sbjct 121 QEFVDANSAEKLLSVVNSPIVPAGKQLSTAAVDQGSQAGDLLGIALLLNKDPAAPVVSDA 180 Query 181 QRDTVLAALRETGFITYQPRDRIGTANATVVVTGGALSTDAGNQGVSVARFAAALAPRGS 240 +RDTVL ALR+TGF+T+ D +G AN ++VTGGAL DAGN+G +VARFAA LA GS Sbjct 181 ERDTVLTALRDTGFLTFG-TDPVGAANTALIVTGGALGDDAGNRGATVARFAAGLAKHGS 239 Query 241 GTLLAGRDGSANRPAAVAVTRADADMAAEISTVDDIDAEPGRITVILALHDLINGGHVGH 300 GT+L GRDGSA+ AVAVTR+D + +STVDD+D E GRIT +LAL DLI G G Sbjct 240 GTVLVGRDGSASGTGAVAVTRSDPALTGAVSTVDDVDTESGRITSVLALADLIGGARPGQ 299 Query 301 YGTGHGAMSVTVSQ 314 YG G GA +VT++Q Sbjct 300 YGVGQGAGAVTIAQ 313 >gi|289753788|ref|ZP_06513166.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] gi|289694375|gb|EFD61804.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] Length=262 Score = 371 bits (953), Expect = 8e-101, Method: Compositional matrix adjust. Identities = 192/204 (95%), Positives = 195/204 (96%), Gaps = 1/204 (0%) Query 1 MISLRQHAVSLAAVFLALAMGVVLGSGFFSDTLLSSLRSEKRDLYTQIDRLTDQRDALRE 60 MISLRQHAVSLAAVFLALAMGVVLGSGFFSDTLLSSLRSEKRDLYTQIDRLTDQRDALRE Sbjct 6 MISLRQHAVSLAAVFLALAMGVVLGSGFFSDTLLSSLRSEKRDLYTQIDRLTDQRDALRE 65 Query 61 KLSAADNFDIQVGSRIVHDALVGKSVVIFRTPDAHDDDIAAVSKIVGQAGGAVTATVSLT 120 KLSAADNFDIQVGSRIVHDALVGKSVVIFRTPDAHDDDIAAVSKIVGQAGGAVTATVSLT Sbjct 66 KLSAADNFDIQVGSRIVHDALVGKSVVIFRTPDAHDDDIAAVSKIVGQAGGAVTATVSLT 125 Query 121 QEFVEANSAEKLRSVVNSSILPAGSQLSTKLVDQGSQAGDLLGIALLSNADPAAPTVEQA 180 QEFVEANSAEKLRSVVNSSILPAGSQLSTKL + + DLLGIALLSNADPAAPTVEQA Sbjct 126 QEFVEANSAEKLRSVVNSSILPAGSQLSTKL-EPRFPSRDLLGIALLSNADPAAPTVEQA 184 Query 181 QRDTVLAALRETGFITYQPRDRIG 204 QRDTVLAALRETGFITYQP +G Sbjct 185 QRDTVLAALRETGFITYQPATALG 208 >gi|254821092|ref|ZP_05226093.1| hypothetical protein MintA_14242 [Mycobacterium intracellulare ATCC 13950] Length=239 Score = 371 bits (952), Expect = 9e-101, Method: Compositional matrix adjust. Identities = 185/239 (78%), Positives = 208/239 (88%), Gaps = 0/239 (0%) Query 1 MISLRQHAVSLAAVFLALAMGVVLGSGFFSDTLLSSLRSEKRDLYTQIDRLTDQRDALRE 60 MISLRQHA+SLAAVFLALA+GVVLGSGF SDTLLSSLR EK+DL QI L DQ++ L E Sbjct 1 MISLRQHALSLAAVFLALAVGVVLGSGFLSDTLLSSLRDEKKDLNAQISGLNDQKNVLNE 60 Query 61 KLSAADNFDIQVGSRIVHDALVGKSVVIFRTPDAHDDDIAAVSKIVGQAGGAVTATVSLT 120 KLSAA+NFD Q+ RIVHDAL GKSVV+FRTPDA DDD+AAVSK +GQAGG VT TVSLT Sbjct 61 KLSAANNFDTQLAGRIVHDALAGKSVVVFRTPDAKDDDVAAVSKFIGQAGGTVTGTVSLT 120 Query 121 QEFVEANSAEKLRSVVNSSILPAGSQLSTKLVDQGSQAGDLLGIALLSNADPAAPTVEQA 180 QEFVEANSAEKL++VVNSS+LPAG QLSTKLVDQGSQAGDL+GIALL+N +PA P V+ Sbjct 121 QEFVEANSAEKLQTVVNSSVLPAGQQLSTKLVDQGSQAGDLMGIALLANPNPAVPPVDDT 180 Query 181 QRDTVLAALRETGFITYQPRDRIGTANATVVVTGGALSTDAGNQGVSVARFAAALAPRG 239 QR+TVLAALR+TGFITYQ D++G ANA +VVTGGAL DAGNQG SVARF+AALAP G Sbjct 181 QRNTVLAALRDTGFITYQASDQMGAANAALVVTGGALPQDAGNQGASVARFSAALAPHG 239 >gi|333990494|ref|YP_004523108.1| hypothetical protein JDM601_1854 [Mycobacterium sp. JDM601] gi|333486462|gb|AEF35854.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=313 Score = 347 bits (890), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 194/314 (62%), Positives = 243/314 (78%), Gaps = 1/314 (0%) Query 1 MISLRQHAVSLAAVFLALAMGVVLGSGFFSDTLLSSLRSEKRDLYTQIDRLTDQRDALRE 60 MI+ R HA+SL AV LAL +GVVLGSG S L+ L+S+K++L QID L Q++AL E Sbjct 1 MITPRYHAMSLTAVLLALVLGVVLGSGLLSGPLMGGLQSDKQELRAQIDTLHQQQNALGE 60 Query 61 KLSAADNFDIQVGSRIVHDALVGKSVVIFRTPDAHDDDIAAVSKIVGQAGGAVTATVSLT 120 +LS A++FD + RIV DAL GKS V+FRTPDA D+D+ AV++I+GQAGG VT TV+LT Sbjct 61 RLSNANDFDAAMAPRIVRDALQGKSAVVFRTPDAADEDVDAVARIIGQAGGTVTGTVALT 120 Query 121 QEFVEANSAEKLRSVVNSSILPAGSQLSTKLVDQGSQAGDLLGIALLSNADPAAPTVEQA 180 +FV+ N+ EKLR+V+ S I+PAG+QLS+ L+D G+QAGDLLGIALL N DPA V+ Sbjct 121 TQFVDGNAEEKLRAVMESGIVPAGAQLSSNLIDSGAQAGDLLGIALLINRDPAVGPVDDP 180 Query 181 QRDTVLAALRETGFITYQPRDRIGTANATVVVTGGALSTDAGNQGVSVARFAAALAPRGS 240 QR TVLAALR+TGFITY+ + R G ANA VV+TGGAL DAG+ GVSVARFAAALAP GS Sbjct 181 QRATVLAALRDTGFITYREQ-RFGPANAAVVITGGALPDDAGSAGVSVARFAAALAPHGS 239 Query 241 GTLLAGRDGSANRPAAVAVTRADADMAAEISTVDDIDAEPGRITVILALHDLINGGHVGH 300 T+LAGRDG A+ AAVA+ R D+ +AA +STVDD+D E GRIT ++A+ LI GGH G Sbjct 240 ATVLAGRDGCASGTAAVAMARTDSSVAAAVSTVDDVDVESGRITTVMAVSSLIEGGHSGQ 299 Query 301 YGTGHGAMSVTVSQ 314 YG GHGA SVT++Q Sbjct 300 YGIGHGAGSVTIAQ 313 >gi|169629449|ref|YP_001703098.1| hypothetical protein MAB_2363 [Mycobacterium abscessus ATCC 19977] gi|169241416|emb|CAM62444.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=310 Score = 316 bits (809), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 174/312 (56%), Positives = 226/312 (73%), Gaps = 3/312 (0%) Query 1 MISLRQHAVSLAAVFLALAMGVVLGSGFFSDTLLSSLRSEKRDLYTQIDRLTDQRDALRE 60 MI+LRQHA+SLAAVFLALA+GV+LGSG +DTLLS LR +KR QI+ L ++AL E Sbjct 1 MITLRQHAISLAAVFLALAVGVILGSGLLNDTLLSGLREDKRSQQRQIEDLNQDKNALNE 60 Query 61 KLSAADNFDIQVGSRIVHDALVGKSVVIFRTPDAHDDDIAAVSKIVGQAGGAVTATVSLT 120 KL+AA NFD + R+V DAL + VV+ TP+A D+ +++++ AGG+V+ + LT Sbjct 61 KLNAASNFDATMAPRMVKDALADRKVVLITTPEADRSDVDGIAQLISTAGGSVSGRIGLT 120 Query 121 QEFVEANSAEKLRSVVNSSILPAGSQLSTKLVDQGSQAGDLLGIALLSNADPAAPTVEQA 180 +F +AN E+LR++VNSSILPAG+QL T VDQGSQAGDL+GI L DPA P ++ Sbjct 121 DQFTDANQGERLRTIVNSSILPAGTQLRTDAVDQGSQAGDLVGIVLQIPRDPAPPVTDE- 179 Query 181 QRDTVLAALRETGFITYQPRDRIGTANATVVVTGGALSTDAGNQGVSVARFAAALAPRGS 240 QR+T L+ALR++GFITY ++ N VVVTGG L DAGN+G +VARFAAAL RGS Sbjct 180 QRNTALSALRQSGFITYTD-GQVAPGNLAVVVTGGGLPDDAGNKGSTVARFAAALDRRGS 238 Query 241 GTLLAGRDGSANRPAAVAVTRADADMAAEISTVDDIDAEPGRITVILALHDLINGGHVGH 300 GT+L GR GSAN AA++VTRAD+ +A+ STVDDI+ GRIT +LAL + + GH G Sbjct 239 GTVLTGRSGSANGIAAISVTRADSSLASAASTVDDIEMASGRITTVLALREQSD-GHSGR 297 Query 301 YGTGHGAMSVTV 312 YG G GA S+TV Sbjct 298 YGLGPGATSITV 309 >gi|226306750|ref|YP_002766710.1| channel protein [Rhodococcus erythropolis PR4] gi|226185867|dbj|BAH33971.1| putative channel protein [Rhodococcus erythropolis PR4] Length=317 Score = 257 bits (657), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 159/315 (51%), Positives = 212/315 (68%), Gaps = 6/315 (1%) Query 1 MISLRQHAVSLAAVFLALAMGVVLGSGFFSDTLLSSLRSEKRDLYTQIDRLTDQRDALRE 60 MIS+RQHA+S+AA+FLALA+GVVLGSG S LLS LR +K DL +I+ L Q + L++ Sbjct 1 MISMRQHAISIAAIFLALAIGVVLGSGMLSSGLLSGLRDDKADLQNEIEDLNQQSNQLQQ 60 Query 61 KLSAADNFDIQVGSRIVHDALVGKSVVIFRTPDAHDDDIAAVSKIVGQAGGAVTATVSLT 120 +L++AD FD VG R+V D+L G++VV+ PDA D+ V+++V AGGAVT VSLT Sbjct 61 QLNSADGFDAAVGGRVVRDSLAGRTVVVITAPDADPSDLDGVNRLVTAAGGAVTGRVSLT 120 Query 121 QEFVEANSAEKLRSVVNSSILPAGSQLSTKLVDQGSQAGDLLGIALLSNADPAAPTVEQA 180 FV+A ++LR+VV ++++PAG L T VDQGS AGDLLG LL N + P Sbjct 121 DSFVDATGGDRLRTVV-TNVIPAGITLKTGAVDQGSLAGDLLGSVLLLNGQNSEPQSTPD 179 Query 181 QRDTVLAALRETGFITYQPRDRIGTANATVVVTGGALS-TDA--GNQGVSVARFAAALAP 237 + + L +LR GFI+Y + A VV+TG S +DA GN+G +ARFA AL Sbjct 180 EMNLALDSLRSAGFISYD-DGAVKPAQLAVVLTGDNKSESDAATGNRGAVIARFAGALDG 238 Query 238 RGSGTLLAGRDGSANRPAAVAVTRADADMAAEISTVDDIDAEPGRITVILALHDLINGGH 297 RG+GT+LAGR GSA VAV RADA ++A ++T+D+ID E G+IT LAL + +NGG Sbjct 239 RGAGTILAGRPGSAEGSGPVAVARADAALSAGLTTIDNIDRESGKITTPLALQEQLNGG- 297 Query 298 VGHYGTGHGAMSVTV 312 G YGTG GA +VTV Sbjct 298 AGRYGTGPGAAAVTV 312 >gi|229494822|ref|ZP_04388576.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] gi|229318260|gb|EEN84127.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] Length=324 Score = 255 bits (652), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 158/315 (51%), Positives = 212/315 (68%), Gaps = 6/315 (1%) Query 1 MISLRQHAVSLAAVFLALAMGVVLGSGFFSDTLLSSLRSEKRDLYTQIDRLTDQRDALRE 60 +IS+RQHA+S+AA+FLALA+GVVLGSG S LLS LR +K DL +I+ L Q + L++ Sbjct 8 VISMRQHAISIAAIFLALAIGVVLGSGMLSSGLLSGLRDDKADLQNEIEDLNQQSNQLQQ 67 Query 61 KLSAADNFDIQVGSRIVHDALVGKSVVIFRTPDAHDDDIAAVSKIVGQAGGAVTATVSLT 120 +L++AD FD VG R+V D+L G++VV+ PDA D+ V+++V AGGAVT VSLT Sbjct 68 QLNSADGFDAAVGGRVVRDSLAGRTVVVITAPDADPSDLDGVNRLVTAAGGAVTGRVSLT 127 Query 121 QEFVEANSAEKLRSVVNSSILPAGSQLSTKLVDQGSQAGDLLGIALLSNADPAAPTVEQA 180 FV+A ++LR+VV ++++PAG L T VDQGS AGDLLG LL N + P Sbjct 128 DSFVDATGGDRLRTVV-TNVIPAGITLKTGAVDQGSLAGDLLGSVLLLNGQNSEPQSTPD 186 Query 181 QRDTVLAALRETGFITYQPRDRIGTANATVVVTGGALS-TDA--GNQGVSVARFAAALAP 237 + + L +LR GFI+Y + A VV+TG S +DA GN+G +ARFA AL Sbjct 187 EMNLALDSLRSAGFISYD-DGAVKPAQLAVVLTGDNKSESDAATGNRGAVIARFAGALDG 245 Query 238 RGSGTLLAGRDGSANRPAAVAVTRADADMAAEISTVDDIDAEPGRITVILALHDLINGGH 297 RG+GT+LAGR GSA VAV RADA ++A ++T+D+ID E G+IT LAL + +NGG Sbjct 246 RGAGTILAGRPGSAEGSGPVAVARADAALSAGLTTIDNIDRESGKITTPLALQEQLNGG- 304 Query 298 VGHYGTGHGAMSVTV 312 G YGTG GA +VTV Sbjct 305 AGRYGTGPGAAAVTV 319 >gi|312139853|ref|YP_004007189.1| hypothetical protein REQ_24680 [Rhodococcus equi 103S] gi|311889192|emb|CBH48506.1| putative secreted protein [Rhodococcus equi 103S] Length=314 Score = 239 bits (610), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 136/292 (47%), Positives = 192/292 (66%), Gaps = 4/292 (1%) Query 1 MISLRQHAVSLAAVFLALAMGVVLGSGFFSDTLLSSLRSEKRDLYTQIDRLTDQRDALRE 60 MIS+RQHA+S+AA+FLALA+GVVLGSG S+ +LS LR +K DL ++I+ L + L E Sbjct 1 MISMRQHAISIAAIFLALAIGVVLGSGLLSNGMLSGLRDDKADLQSRIEDLNTTNNQLNE 60 Query 61 KLSAADNFDIQVGSRIVHDALVGKSVVIFRTPDAHDDDIAAVSKIVGQAGGAVTATVSLT 120 +L+AAD FD V RIV D L +SVV+ TPDA + +++++GQAGG VT V+LT Sbjct 61 QLTAADGFDSVVSDRIVRDTLAQRSVVVVTTPDADPGEAEGINRLIGQAGGNVTGRVALT 120 Query 121 QEFVEANSAEKLRSVVNSSILPAGSQLSTKLVDQGSQAGDLLGIALLSNADPAAPTVEQA 180 + FV++ + ++LR+ V ++++PAG QL T VDQGS AGDLLG LL + A P Sbjct 121 KSFVDSVNGDQLRTTV-TNVIPAGIQLRTGAVDQGSLAGDLLGSVLLLDPQTAQPQTTPE 179 Query 181 QRDTVLAALRETGFITYQPRDRIGTANATVVVTG-GALSTDAGNQGVSVARFAAALAPRG 239 +R L ALR GF+ + + A +V+TG G +GN+G +ARFAAA+ RG Sbjct 180 ERALALDALRGGGFVDFD--GNVAPAQFAIVLTGSGDPENTSGNRGAVIARFAAAMDGRG 237 Query 240 SGTLLAGRDGSANRPAAVAVTRADADMAAEISTVDDIDAEPGRITVILALHD 291 +G +L G +A +AV RADA ++A +STVD++D E GRIT +LAL + Sbjct 238 AGAVLVGPPAAAEGSGPIAVARADAGVSATLSTVDNVDRESGRITTVLALQE 289 >gi|226360079|ref|YP_002777857.1| channel protein [Rhodococcus opacus B4] gi|226238564|dbj|BAH48912.1| putative channel protein [Rhodococcus opacus B4] Length=316 Score = 231 bits (588), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 146/308 (48%), Positives = 200/308 (65%), Gaps = 15/308 (4%) Query 1 MISLRQHAVSLAAVFLALAMGVVLGSGFFSDTLLSSLRSEKRDLYTQIDRLTDQRDALRE 60 MISLRQHA+S+AA+FLALA+GVV+GSG S L+S LR +K DL T ++ +++ + L E Sbjct 1 MISLRQHAISIAAIFLALAIGVVMGSGLLSSGLVSGLRDDKADLQTDLENASERNNQLTE 60 Query 61 KLSAADNFDIQVGSRIVHDALVGKSVVIFRTPDAHDDDIAAVSKIVGQAGGAVTATVSLT 120 +L++AD FD VG R+V D+L ++V++ TPDA D+ V++++ QAGG+VT VSLT Sbjct 61 QLNSADGFDSAVGGRVVADSLAQRTVMVVTTPDADPADLDGVNRMIAQAGGSVTGRVSLT 120 Query 121 QEFVEANSAEKLRSVVNSSILPAGSQLSTKLVDQGSQAGDLLGIALLSNADPAAPTVEQA 180 FV+A ++LR+VVN +++PAG L T VDQGS AGDLLG L+ + P Sbjct 121 DSFVDATGGDRLRTVVN-NVIPAGVTLKTGAVDQGSLAGDLLGSVLMLGKETGQPQSSAQ 179 Query 181 QRDTVLAALRETGFITY-----QPRDRIGTANATVVVTGGALSTD--AGNQGVSVARFAA 233 + L LR GF++Y QP A VV+TG D +GN+G VARFA Sbjct 180 EMALALETLRGAGFVSYDDGAVQP------AQVAVVLTGDRDVEDGVSGNRGAVVARFAG 233 Query 234 ALAPRGSGTLLAGRDGSANRPAAVAVTRADADMAAEISTVDDIDAEPGRITVILALHDLI 293 AL RG+G +LAGR SA AVAV RADA ++A ++T+D+ID E G+ITV LAL + + Sbjct 234 ALDSRGAGAVLAGRPASAQGNGAVAVARADAALSAALTTIDNIDREAGKITVPLALQEQL 293 Query 294 NGGHVGHY 301 NGG G Y Sbjct 294 NGG-AGRY 300 >gi|325674270|ref|ZP_08153959.1| hypothetical protein HMPREF0724_11741 [Rhodococcus equi ATCC 33707] gi|325554950|gb|EGD24623.1| hypothetical protein HMPREF0724_11741 [Rhodococcus equi ATCC 33707] Length=311 Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 132/289 (46%), Positives = 188/289 (66%), Gaps = 4/289 (1%) Query 4 LRQHAVSLAAVFLALAMGVVLGSGFFSDTLLSSLRSEKRDLYTQIDRLTDQRDALREKLS 63 +RQHA+S+AA+FLALA+GVVLGSG S+ +LS LR +K DL ++I+ L + L E+L+ Sbjct 1 MRQHAISIAAIFLALAIGVVLGSGLLSNGMLSGLRDDKADLQSRIEDLNTTNNQLNEQLT 60 Query 64 AADNFDIQVGSRIVHDALVGKSVVIFRTPDAHDDDIAAVSKIVGQAGGAVTATVSLTQEF 123 AAD FD V RIV D L +SVV+ TPDA + +++++ QAGG VT V+LT+ F Sbjct 61 AADGFDSVVSDRIVRDTLAQRSVVVVTTPDADPGEAEGINRLISQAGGNVTGRVALTKSF 120 Query 124 VEANSAEKLRSVVNSSILPAGSQLSTKLVDQGSQAGDLLGIALLSNADPAAPTVEQAQRD 183 V++ + ++LR+ V ++++PAG QL T VDQGS AGDLLG LL + A P +R Sbjct 121 VDSVNGDQLRTTV-TNVIPAGIQLRTGAVDQGSLAGDLLGSVLLLDPQTAQPQTTPEERA 179 Query 184 TVLAALRETGFITYQPRDRIGTANATVVVTG-GALSTDAGNQGVSVARFAAALAPRGSGT 242 L ALR GF+ + + A +V+TG G +GN+G +ARFAAA+ RG+G Sbjct 180 LALDALRGGGFVDFD--GNVAPAQFAIVLTGSGDPENTSGNRGAVIARFAAAMDGRGAGA 237 Query 243 LLAGRDGSANRPAAVAVTRADADMAAEISTVDDIDAEPGRITVILALHD 291 +L G +A +AV RADA ++A +STVD++D E GRIT +LAL + Sbjct 238 VLVGPPAAAEGSGPIAVARADAGVSATLSTVDNVDRESGRITTVLALQE 286 >gi|111017949|ref|YP_700921.1| hypothetical protein RHA1_ro00932 [Rhodococcus jostii RHA1] gi|110817479|gb|ABG92763.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=316 Score = 229 bits (585), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 145/308 (48%), Positives = 199/308 (65%), Gaps = 15/308 (4%) Query 1 MISLRQHAVSLAAVFLALAMGVVLGSGFFSDTLLSSLRSEKRDLYTQIDRLTDQRDALRE 60 MISLR HA+S+AA+FLALA+GVV+GSG S L+S LR +K DL T +++ ++ + L E Sbjct 1 MISLRHHAISIAAIFLALAIGVVMGSGLLSSGLVSGLRDDKADLQTDVEKANERNNQLTE 60 Query 61 KLSAADNFDIQVGSRIVHDALVGKSVVIFRTPDAHDDDIAAVSKIVGQAGGAVTATVSLT 120 +L++AD FD VG R+V D+L ++V++ TPDA D+ V++++ QAGG+VT VSLT Sbjct 61 QLNSADGFDSAVGGRVVADSLAQRTVMVVTTPDADPADLDGVNRMIAQAGGSVTGRVSLT 120 Query 121 QEFVEANSAEKLRSVVNSSILPAGSQLSTKLVDQGSQAGDLLGIALLSNADPAAPTVEQA 180 FV+A ++LR+VVN +++PAG L T VDQGS AGDLLG L+ + P Sbjct 121 DSFVDATGGDRLRTVVN-NVIPAGVTLKTGAVDQGSLAGDLLGSVLMLGKETGQPQSSAQ 179 Query 181 QRDTVLAALRETGFITY-----QPRDRIGTANATVVVTGGALSTD--AGNQGVSVARFAA 233 + L LR GF++Y QP A VV+TG D +GN+G VARFA Sbjct 180 EMALALETLRGAGFVSYDDGAVQP------AQVAVVLTGDRDVEDGVSGNRGAVVARFAG 233 Query 234 ALAPRGSGTLLAGRDGSANRPAAVAVTRADADMAAEISTVDDIDAEPGRITVILALHDLI 293 AL RG+G +LAGR SA AVAV RADA ++A ++T+D+ID E G+ITV LAL + + Sbjct 234 ALDARGAGAVLAGRPASAQGNGAVAVARADAALSAALTTIDNIDREAGKITVPLALQEQL 293 Query 294 NGGHVGHY 301 NGG G Y Sbjct 294 NGG-AGRY 300 >gi|326384764|ref|ZP_08206441.1| hypothetical protein SCNU_17570 [Gordonia neofelifaecis NRRL B-59395] gi|326196572|gb|EGD53769.1| hypothetical protein SCNU_17570 [Gordonia neofelifaecis NRRL B-59395] Length=309 Score = 223 bits (567), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 133/312 (43%), Positives = 192/312 (62%), Gaps = 9/312 (2%) Query 1 MISLRQHAVSLAAVFLALAMGVVLGSGFFSDTLLSSLRSEKRDLYTQIDRLTDQRDALRE 60 MISLRQHAVSL AVFLAL +G+ LGSGF D + ++L RD ++ +L D+RDAL + Sbjct 1 MISLRQHAVSLIAVFLALTLGLFLGSGFIGDRM-NALTGTDRD---KLGKLQDERDALDK 56 Query 61 KLSAADNFDIQVGSRIVHDALVGKSVVIFRTPDAHDDDIAAVSKIVGQAGGAVTATVSLT 120 ++ F +G ++ L +SV+I PDA D D+ ++ +V AGG V+ ++L+ Sbjct 57 EVGYDSAFIKAIGPQLTKGVLNKRSVLIVTAPDAADADVESLKGLVNDAGGTVSGQLALS 116 Query 121 QEFVEANSAEKLRSVVNSSILPAGSQLSTKLVDQGSQAGDLLGIALLSNADPAAPTVEQA 180 V A KLR+VV+ SI PAG+QL + D GS+ GDL+G+ +LS P Sbjct 117 TALVRDEQASKLRTVVDQSI-PAGAQLRVEYTDSGSRLGDLMGVTVLSR--PGQSPASDN 173 Query 181 QRDTVLAALRETGFITYQPRDRIGTANATVVVTGGALSTDAGNQGVSVARFAAALAPRGS 240 R T L LRE GF+ + + A+ +VVTGG +++D+G QG + RFAAA+A RGS Sbjct 174 DRSTALQTLREGGFLEFAD-GAVKPADLVLVVTGGEMASDSGAQGQFIGRFAAAMAARGS 232 Query 241 GTLLAGRDGSANRPAAVAVTRADADMAAEISTVDDIDAEPGRITVILALHDLINGGHVGH 300 G +LAGR GSA + + V R+D + +STVD++D + G++T +LAL D + G G Sbjct 233 GGVLAGRTGSAEGGSPIGVVRSDPSLNNAVSTVDNVDQQTGQLTTVLALGDETD-GRTGA 291 Query 301 YGTGHGAMSVTV 312 YGTG GA ++TV Sbjct 292 YGTGPGATAITV 303 >gi|54023972|ref|YP_118214.1| hypothetical protein nfa20040 [Nocardia farcinica IFM 10152] gi|54015480|dbj|BAD56850.1| putative channel protein [Nocardia farcinica IFM 10152] Length=315 Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 133/296 (45%), Positives = 182/296 (62%), Gaps = 12/296 (4%) Query 1 MISLRQHAVSLAAVFLALAMGVVLGSGFFSDTLLSSLRSEKRDLYTQIDRLTDQRDALRE 60 MISLRQHA+S+ A+FLALA+GVVLGS + LLS LR++K +L Q+D L + AL + Sbjct 2 MISLRQHAISIVAIFLALAIGVVLGSQTLAADLLSGLRADKTELGRQVDDLGARNRALTD 61 Query 61 KLSAADNFDIQVGSRIVHDALVGKSVVIFRTPDAHDDDIAAVSKIVGQAGGAVTATVSLT 120 ++ AAD F RI+ L +SV++F TPDA D+ AVS + AG AV ++LT Sbjct 62 QVDAADRFIASSAGRILGGTLADRSVLVFTTPDADPADVEAVSTGLQTAGAAVAGRIALT 121 Query 121 QEFVEANSAEKLRSVVNSSILPAGSQLSTKLVDQGSQAGDLLGIALLSNADPAAPTVEQA 180 FV+A ++LR+ V ++I PAG+QL T VDQGS AGDLLG+ LL + P Sbjct 122 DAFVDAAEGDRLRTAVTNTI-PAGAQLRTGGVDQGSLAGDLLGMVLLLDPATGQPRSTPQ 180 Query 181 QRDTVLAALRETGFITY-----QPRDRIGTANATVVVTGGALSTDAGNQGVSVARFAAAL 235 + VL LR GF+ Y QP A VVVTG +G +VARFA AL Sbjct 181 ELSLVLETLRGGGFLAYGDTPVQP------AQLAVVVTGAGAQAAENARGANVARFAGAL 234 Query 236 APRGSGTLLAGRDGSANRPAAVAVTRADADMAAEISTVDDIDAEPGRITVILALHD 291 RG+G +LAGR G+A+ A+A+ R+DA +AA ++TVD++D E GR+T +L L + Sbjct 235 RGRGAGVVLAGRTGAADGQGALAIVRSDAALAAALTTVDNLDREIGRVTTVLGLTE 290 >gi|302528020|ref|ZP_07280362.1| predicted protein [Streptomyces sp. AA4] gi|302436915|gb|EFL08731.1| predicted protein [Streptomyces sp. AA4] Length=315 Score = 189 bits (479), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 127/311 (41%), Positives = 181/311 (59%), Gaps = 6/311 (1%) Query 1 MISLRQHAVSLAAVFLALAMGVVLGSGFFSDTLLSSLRSEKRDLYTQIDRLTDQRDALRE 60 MISLR H VS+ A FLALA+GVVLGS + +LLS L +K+DL TQ+ L QR+ L+ Sbjct 1 MISLRYHIVSITACFLALAVGVVLGSTALNGSLLSGLADQKKDLGTQVADLEAQRNNLKA 60 Query 61 KLSAADNFDIQVGSRIVHDALVGKSVVIFRTPDAHDDDIAAVSKIVGQAGGAVTATVSLT 120 +L+ AD F +G ++V AL +SVVI T DA D A+ K+VGQ+G +VT + LT Sbjct 61 RLADADAFAGTMGPKVVAGALDKRSVVIVTTQDARPADRDALKKLVGQSGASVTGELQLT 120 Query 121 QEFVEANSAEKLRSVVNSSILPAGSQLSTKLVDQGSQAGDLLGIALLSNADPAAPTVEQA 180 F + A++LR VV + + PAG++ T D G+ AG LLG LL + A P Sbjct 121 SAFTDPAKADQLRDVV-TRLQPAGAKFPTA-GDSGTLAGALLGSVLLLDKASAKPQSSGD 178 Query 181 QRDTVLAALRETGFITYQPRDRIGTANATVVVTGGALSTD-AGNQGVSVARFAAALAPRG 239 + L L + GF+ + + A +V+TG + D AG++ ++ARFAA + G Sbjct 179 ELAAALGGLTDGGFV--KQSQGVQPAQLAIVLTGAQETGDGAGDRAATIARFAAQMDRSG 236 Query 240 SGTLLAGRDGSANRPAAVAVTRADADMAAEISTVDDIDAEPGRITVILALHDLINGGHVG 299 +GT+LAG GSA + V RAD + +STVD+ D+ GR+ ILAL + +NGG G Sbjct 237 AGTVLAGDPGSAEGAGPIGVVRADTSATSILSTVDNADSAAGRVATILALQEQLNGGS-G 295 Query 300 HYGTGHGAMSV 310 YG A ++ Sbjct 296 RYGIAGNAQAI 306 >gi|262202723|ref|YP_003273931.1| hypothetical protein Gbro_2824 [Gordonia bronchialis DSM 43247] gi|262086070|gb|ACY22038.1| hypothetical protein Gbro_2824 [Gordonia bronchialis DSM 43247] Length=312 Score = 189 bits (479), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 142/312 (46%), Positives = 197/312 (64%), Gaps = 9/312 (2%) Query 1 MISLRQHAVSLAAVFLALAMGVVLGSGFFSDTLLSSLRSEKRDLYTQIDRLTDQRDALRE 60 MISLRQHA+SL AVFLALA+G+ LGSGF D ++S+ RD +I L +QRD L E Sbjct 1 MISLRQHAISLVAVFLALALGLFLGSGFVGDR-MNSVTGTSRD---RIGDLENQRDDLNE 56 Query 61 KLSAADNFDIQVGSRIVHDALVGKSVVIFRTPDAHDDDIAAVSKIVGQAGGAVTATVSLT 120 +L+AA++FD V R++ ++L G+SVV+ P+A D D+ AV + + AGG ++LT Sbjct 57 QLNAANSFDQAVAPRLIANSLRGQSVVVVTAPNAADADVTAVKESISGAGGRFAGQIALT 116 Query 121 QEFVEANSAEKLRSVVNSSILPAGSQLSTKLVDQGSQAGDLLGIALLSNADPAAPTVEQA 180 V AE+LR++V+ +I P G+ L +L D G + GDLLG +L+ D +AP + Sbjct 117 DTLVTDQKAEQLRTIVDQTI-PPGTLLRPELTDSGGRTGDLLG-SLILRRDGSAP-ARAS 173 Query 181 QRDTVLAALRETGFITYQPRDRIGTANATVVVTGGALSTDAGNQGVSVARFAAALAPRGS 240 R T L LR+ GFI Y + I A+ V+VTGG D+G QG VARFAAA+A RG Sbjct 174 DRATGLQTLRDGGFIDYAD-NAITPADLMVLVTGGDFGKDSGAQGSVVARFAAAMAARGE 232 Query 241 GTLLAGRDGSANRPAAVAVTRADADMAAEISTVDDIDAEPGRITVILALHDLINGGHVGH 300 G +L GR GSA + +AV R+D + +STVD++D + GRIT +L L + GH G Sbjct 233 GGVLVGRGGSAEGGSPIAVVRSDPALGNAVSTVDNVDQQTGRITTVLVLSSE-SKGHTGA 291 Query 301 YGTGHGAMSVTV 312 YGTG GA ++TV Sbjct 292 YGTGAGASAITV 303 >gi|300787873|ref|YP_003768164.1| hypothetical protein AMED_6021 [Amycolatopsis mediterranei U32] gi|299797387|gb|ADJ47762.1| conserved hypothetical protein [Amycolatopsis mediterranei U32] gi|340529445|gb|AEK44650.1| hypothetical protein RAM_30875 [Amycolatopsis mediterranei S699] Length=316 Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 125/303 (42%), Positives = 175/303 (58%), Gaps = 6/303 (1%) Query 1 MISLRQHAVSLAAVFLALAMGVVLGSGFFSDTLLSSLRSEKRDLYTQIDRLTDQRDALRE 60 MISLR H VS+AA FLALA+GVVLGS + TLLS L EK+DL +Q+ L QR+AL Sbjct 1 MISLRYHVVSIAACFLALAVGVVLGSTALNGTLLSGLAGEKKDLGSQVADLEAQRNALNA 60 Query 61 KLSAADNFDIQVGSRIVHDALVGKSVVIFRTPDAHDDDIAAVSKIVGQAGGAVTATVSLT 120 +L+ AD F +G ++V AL +SVV+ T DA D A+ +++GQAG +VT V LT Sbjct 61 RLTDADAFAGSMGPKVVAGALDKRSVVLVTTDDARPADRDALKQLIGQAGASVTGEVQLT 120 Query 121 QEFVEANSAEKLRSVVNSSILPAGSQLSTKLVDQGSQAGDLLGIALLSNADPAAPTVEQA 180 F ++ LR VV + + PAGS+ T D G+ AG LLG LL + A P Sbjct 121 SAFANPEKSDPLRDVV-TRLQPAGSKFPTA-GDSGTLAGALLGSVLLLDKTTAKPQSSPE 178 Query 181 QRDTVLAALRETGFITYQPRDRIGTANATVVVTGGALSTD-AGNQGVSVARFAAALAPRG 239 + L L + GF+ P + A +V+TG + D AG++ ++AR A L G Sbjct 179 ELSAALGGLTDGGFVKAGP--DVKPAQLAIVLTGAQATGDGAGDRAATIARVATQLDRSG 236 Query 240 SGTLLAGRDGSANRPAAVAVTRADADMAAEISTVDDIDAEPGRITVILALHDLINGGHVG 299 +G +L G GSA+ A+ V RAD + +STVD+ D GR++ +LAL + ++GG G Sbjct 237 AGAVLVGDAGSADGTGALGVVRADTSATSILSTVDNADTSAGRVSTVLALKEQLDGG-AG 295 Query 300 HYG 302 YG Sbjct 296 RYG 298 >gi|467144|gb|AAA50908.1| unknown [Mycobacterium leprae] Length=135 Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 94/123 (77%), Positives = 103/123 (84%), Gaps = 0/123 (0%) Query 1 MISLRQHAVSLAAVFLALAMGVVLGSGFFSDTLLSSLRSEKRDLYTQIDRLTDQRDALRE 60 MISLRQHA SLAAVFLALA+GVVLGSGF SDTLLSSLR EKRDLYTQI L DQ++ L E Sbjct 1 MISLRQHAFSLAAVFLALAVGVVLGSGFLSDTLLSSLRDEKRDLYTQISGLNDQKNMLNE 60 Query 61 KLSAADNFDIQVGSRIVHDALVGKSVVIFRTPDAHDDDIAAVSKIVGQAGGAVTATVSLT 120 K+SAA+NFD Q+ RIVHD L G SVV+FRTPDA DDD+AAVSKIV QAGG VT TVSLT Sbjct 61 KVSAANNFDNQLLGRIVHDVLGGTSVVVFRTPDAKDDDVAAVSKIVVQAGGTVTGTVSLT 120 Query 121 QEF 123 + Sbjct 121 RNL 123 >gi|343928402|ref|ZP_08767850.1| putative channel protein [Gordonia alkanivorans NBRC 16433] gi|343761587|dbj|GAA14776.1| putative channel protein [Gordonia alkanivorans NBRC 16433] Length=311 Score = 175 bits (443), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 142/314 (46%), Positives = 196/314 (63%), Gaps = 13/314 (4%) Query 1 MISLRQHAVSLAAVFLALAMGVVLGSGFFSDTLLSSLRSEKRDLYTQIDRLTDQRDALRE 60 MISLRQHA+SL AVFLALA+G+ LGSGF D + +S+ RD +I L +QRD L Sbjct 1 MISLRQHAISLVAVFLALALGLFLGSGFVGDRV-NSMTGTSRD---RIGDLENQRDDLNA 56 Query 61 KLSAADNFDIQVGSRIVHDALVGKSVVIFRTPDAHDDDIAAVSKIVGQAGGAVTATVSLT 120 KL+AA++FD+ +G R++ + L G+SV++ P+A + D+ AV + + AG ++LT Sbjct 57 KLNAANSFDLAIGPRLIANTLRGQSVLVVTAPNAAEADVDAVKENISGAGARFAGQIALT 116 Query 121 QEFVEANSAEKLRSVVNSSILPAGSQLSTKLVDQGSQAGDLLGIALLSNAD--PAAPTVE 178 + + +AE+LR++V+ +I P G+ L +L D GS+AGDLLG +LS PA+ Sbjct 117 ESLLSEQNAEQLRTIVDQTI-PPGAILRAELTDSGSRAGDLLGTLVLSGKTTRPAS---- 171 Query 179 QAQRDTVLAALRETGFITYQPRDRIGTANATVVVTGGALSTDAGNQGVSVARFAAALAPR 238 A R T LAALR+ GFI Y + + A+ VVVTG D+G QG VAR AAA + R Sbjct 172 SADRRTGLAALRDGGFIDYA-NNAVTPADLMVVVTGDEFGPDSGAQGAVVARLAAAASVR 230 Query 239 GSGTLLAGRDGSANRPAAVAVTRADADMAAEISTVDDIDAEPGRITVILALHDLINGGHV 298 G G +L GR GSAN + +AV RAD + +STVD++D G IT +LAL G Sbjct 231 GVGGVLVGRTGSANGGSPIAVVRADPSLTNAVSTVDNVDQPTGLITTVLALA-AEGKGAT 289 Query 299 GHYGTGHGAMSVTV 312 G YGTG GA +VTV Sbjct 290 GSYGTGAGATAVTV 303 >gi|333919198|ref|YP_004492779.1| hypothetical protein AS9A_1528 [Amycolicicoccus subflavus DQS3-9A1] gi|333481419|gb|AEF39979.1| hypothetical protein AS9A_1528 [Amycolicicoccus subflavus DQS3-9A1] Length=307 Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 134/311 (44%), Positives = 183/311 (59%), Gaps = 7/311 (2%) Query 1 MISLRQHAVSLAAVFLALAMGVVLGSGFFSDTLLSSLRSEKRDLYTQIDRLTDQRDALRE 60 MI LR HAVSL AVFLALA+G+VLGS +D ++ +LRS++ L Q + L +RD Sbjct 1 MIPLRYHAVSLVAVFLALALGLVLGSTTLADRVVQNLRSDRSGLTEQAEALEAERDTALN 60 Query 61 KLSAADNFDIQVGSRIVHDALVGKSVVIFRTPDAHDDDIAAVSKIVGQAGGAVTATVSLT 120 +L AA F + R++ L ++VV+F P A DD+A V ++ +AGG++ TV+LT Sbjct 61 ELDAASEFTVTYADRLLDGELRDQAVVVFAAPGADPDDVAGVRDMLTRAGGSIHGTVTLT 120 Query 121 QEFVEANSAEKLRSVVNSSILPAGSQLSTKLVDQGSQAGDLLGIALLSNADPAAPTVEQA 180 + F + AE+LR +V +S LPAG+QL T DQGS GDLLG A L +A P Sbjct 121 EAFTDVAEAERLRGLVTNS-LPAGAQLDTGATDQGSMTGDLLGTAFL-HAQGEGPQGTDE 178 Query 181 QRDTVLAALRETGFITYQPRDRIGTANATVVVTGGALSTDAGNQGVSVARFAAALAPRGS 240 +R +L L GFI P + A + VVVT D GN G VARFAA LA G+ Sbjct 179 ERQVILDVLSSGGFIA--PEGAVTPAASAVVVTAAQQERD-GNDGAFVARFAAGLAAHGA 235 Query 241 GTLLAGRDGSANRPAAVAVTRADADMAAEISTVDDIDAEPGRITVILALHDLINGGHVGH 300 G + SA+ A+AV R++ MA+ +STVD+ PGR+TV LAL + + G H Sbjct 236 VVAAGGPE-SADGNHALAVIRSETSMASAVSTVDNAGTAPGRVTVALALAERLRGDSA-H 293 Query 301 YGTGHGAMSVT 311 YGTG A++VT Sbjct 294 YGTGPRAVAVT 304 >gi|331697600|ref|YP_004333839.1| hypothetical protein Psed_3816 [Pseudonocardia dioxanivorans CB1190] gi|326952289|gb|AEA25986.1| hypothetical protein Psed_3816 [Pseudonocardia dioxanivorans CB1190] Length=306 Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 134/309 (44%), Positives = 180/309 (59%), Gaps = 11/309 (3%) Query 1 MISLRQHAVSLAAVFLALAMGVVLGSGFFSDTLLSSLRSEKRDLYTQIDRLTDQRDALRE 60 MISLR HAVS+AAVFLALA+GV LGS SD +LS++ + + DL TQ+D+LT QRDAL Sbjct 1 MISLRYHAVSIAAVFLALAVGVFLGSSGLSDRVLSAVSATRDDLSTQVDQLTTQRDALLA 60 Query 61 KLSAADNFDIQVGSRIVHDALVGKSVVIFRTPDAHDDDIAAVSKIVGQAGGAVTATVSLT 120 + ++AD F ++G +V L G+SV + T A D AV+ ++GQAGG T T++LT Sbjct 61 EQASADQFAARIGPSVVKGLLTGRSVAVV-TVGATAADRDAVASLIGQAGGTTTGTLALT 119 Query 121 QEFVEANSAEKLRSVVNSSILPAGSQLSTKLVDQGSQAGDLLGIAL-LSNADPAAPTVEQ 179 + A++LR + + +LP G+QL D GS AG LL L L + P A T +Q Sbjct 120 DAVTDPGRADQLRE-LTAQLLPTGAQLPAA-SDPGSLAGGLLAAVLALRDGKPQA-TADQ 176 Query 180 AQRDTVLAALRETGFITYQPRDRIGTANATVVVTGGALS-TDAGNQGVSVARFAAALAPR 238 AQ V++ L GF+T P A+ +VVTG DAG+ AR A L Sbjct 177 AQ--AVVSGLTTAGFVTAGPAP--APADLVLVVTGSTFQGPDAGDAAAVPARLATELDRD 232 Query 239 GSGTLLAGRDGSANRPAAVAVTRADADMAAEISTVDDIDAEPGRITVILALHDLINGGHV 298 +G +L GR GSA AV V RAD A +STVDD+D GRI +LAL + ++ G Sbjct 233 SAGAVLVGRQGSAAATGAVGVARADRTATAGLSTVDDVDTGSGRIATVLALREQLD-GKA 291 Query 299 GHYGTGHGA 307 G YG+G A Sbjct 292 GSYGSGPKA 300 >gi|134101750|ref|YP_001107411.1| hypothetical protein SACE_5246 [Saccharopolyspora erythraea NRRL 2338] gi|291003077|ref|ZP_06561050.1| hypothetical protein SeryN2_00967 [Saccharopolyspora erythraea NRRL 2338] gi|133914373|emb|CAM04486.1| hypothetical protein SACE_5246 [Saccharopolyspora erythraea NRRL 2338] Length=312 Score = 162 bits (411), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 119/311 (39%), Positives = 168/311 (55%), Gaps = 7/311 (2%) Query 1 MISLRQHAVSLAAVFLALAMGVVLGSGFFSDTLLSSLRSEKRDLYTQIDRLTDQRDALRE 60 MISLR H VS+AAVFLALA+GVVLGS S+ LLSS+ +++ L Q ++L +RDALR Sbjct 1 MISLRYHIVSVAAVFLALALGVVLGSTSVSERLLSSVVADRDSLDGQTEQLRAERDALRA 60 Query 61 KLSAADNFDIQVGSRIVHDALVGKSVVIFRTPDAHDDDIAAVSKIVGQAGGAVTATVSLT 120 ++ AD F +G V L G++VV+ D A+ +++ AG +VT + LT Sbjct 61 QVEGADRFGRAIGPAAVQGQLNGRTVVLISDHRVDPADRDALKELLSAAGASVTGELQLT 120 Query 121 QEFVEANSAEKLRSVVNSSILPAGSQLSTKLVDQGSQAGDLLGIALLSNADPAAPTVEQA 180 + A++LR VVN +LP G Q+ D G+ AG LLG L + P Sbjct 121 DGVTDPYRADQLRQVVN-ELLPTGVQVPAS-ADPGTLAGGLLGPVSLLDPRAGQPHASAE 178 Query 181 QRDTVLAALRETGFITYQPRDRIGTANATVVVTGGALSTD-AGNQGVSVARFAAALAPRG 239 +R LA L GF + A A VV+T + + AG + +AR A L G Sbjct 179 ERTAALAGLTAGGFAHVA--QEVKPAQAAVVLTRARVEDESAGARSAILARMATQLDRSG 236 Query 240 SGTLLAGRDGSANRPAAVAVTRADADMAAEISTVDDIDAEPGRITVILALHDLIN--GGH 297 +GT+LAG GSA+ V + RAD +A+ +STVD+ D GR+ VI+AL + + GH Sbjct 237 AGTVLAGTAGSADGSGPVGIVRADNSIASLVSTVDNTDTAAGRVAVIMALREQFDRQSGH 296 Query 298 VGHYGTGHGAM 308 G G GA+ Sbjct 297 YGSAGNAQGAL 307 >gi|256379441|ref|YP_003103101.1| hypothetical protein Amir_5436 [Actinosynnema mirum DSM 43827] gi|255923744|gb|ACU39255.1| hypothetical protein Amir_5436 [Actinosynnema mirum DSM 43827] Length=308 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 115/299 (39%), Positives = 163/299 (55%), Gaps = 4/299 (1%) Query 4 LRQHAVSLAAVFLALAMGVVLGSGFFSDTLLSSLRSEKRDLYTQIDRLTDQRDALREKLS 63 +R H VSLAA FLALA+GVVLGS S LLS L + L ++ RL +R+ L KL+ Sbjct 1 MRYHVVSLAAAFLALAVGVVLGSTALSGPLLSGLADDNGQLGQRVTRLEQERNGLDAKLA 60 Query 64 AADNFDIQVGSRIVHDALVGKSVVIFRTPDAHDDDIAAVSKIVGQAGGAVTATVSLTQEF 123 AD F +G V L ++V++ T DAH D A+ ++G AG VTA V LT F Sbjct 61 EADRFAGSIGPMAVRGQLTDRTVLVVSTSDAHTGDREALVDLLGSAGALVTAQVELTDAF 120 Query 124 VEANSAEKLRSVVNSSILPAGSQLSTKLVDQGSQAGDLLGIALLSNADPAAPTVEQAQRD 183 A++LR +V S PAG++L D G++AG L+G LL + + A + +R Sbjct 121 TAPQQADRLRDLVARS-QPAGAELPAG-ADPGTRAGALIGTLLLLDGENKAQATDD-ERA 177 Query 184 TVLAALRETGFITYQPRDRIGTANATVVVTGGALSTDAGNQGVSVARFAAALAPRGSGTL 243 + L+AL GF+ R + D+G++ +VARFA L G+G + Sbjct 178 SALSALGSAGFVKVAENARPAQLAVVLGGGVVDDGDDSGDRAATVARFATQLDRSGAGVV 237 Query 244 LAGRDGSANRPAAVAVTRADADMAAEISTVDDIDAEPGRITVILALHDLINGGHVGHYG 302 LAGR GSA + V RAD A+ +STVD+ D+ GR+ +LAL + ++GG G YG Sbjct 238 LAGRGGSAEGRGPIGVVRADQAAASVLSTVDNADSAAGRVVTVLALREQVDGGS-GRYG 295 >gi|296140080|ref|YP_003647323.1| channel protein [Tsukamurella paurometabola DSM 20162] gi|296028214|gb|ADG78984.1| channel protein [Tsukamurella paurometabola DSM 20162] Length=306 Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 108/300 (36%), Positives = 158/300 (53%), Gaps = 9/300 (3%) Query 5 RQHAVSLAAVFLALAMGVVLGSGFFSDTLLSSLRSEKRDLYTQIDRLTDQRDALREKLSA 64 R+ A+ AA+ LALA+G+ LG G S + + RDL TQ+ L + +AL + A Sbjct 14 RRPALFWAAILLALAVGIALGGGVLSRF---TADGDVRDLRTQVQDLERRNEALDARTRA 70 Query 65 ADNFDIQVGSRIVHDALVGKSVVIFRTPDAHDDDIAAVSKIVGQAGGAVTATVSLTQEFV 124 D F + +L G V++ P A DI+ +S+ V Q GG V TV LT+ Sbjct 71 GDAFADAAAPGTLGRSLTGFPVLLVVAPGADGGDISQISRRVTQGGGTVAGTVRLTEALY 130 Query 125 EANSAEKLRSVVNSSILPAGSQLSTKLVDQGSQAGDLLGIALLSNADPAAPTVEQAQRDT 184 + +E+LR V+++ P G L VD ++AGDL+G LL +AP V Q D Sbjct 131 ADDQSERLRGTVDNAA-PVGVTLDAGQVDPRARAGDLIGSILLGKG--SAPAVSQGGTD- 186 Query 185 VLAALRETGFITYQPRDRIGTANATVVVTGGALSTDAGNQGVSVARFAAALAPRGSGTLL 244 L LR+ G++ + + +A A +VVTGGA+ + QG + R AA L+ G G++L Sbjct 187 ALVTLRQAGYLAFDG-PTVPSARAAIVVTGGAVPGEHAGQGQGIGRLAAGLSRHGDGSVL 245 Query 245 AGRDGSANRPAAVAVTRADADMAAEISTVDDIDAEPGRITVILALHDLINGGHVGHYGTG 304 GR GSA + V R D D++A ++TVDD D G+++ LAL G V YGTG Sbjct 246 VGRTGSATGSGPIVVVRQDQDLSARLATVDDADTTVGQVSTALALIQATR-GEVRAYGTG 304 >gi|300781245|ref|ZP_07091099.1| conserved hypothetical protein [Corynebacterium genitalium ATCC 33030] gi|300532952|gb|EFK54013.1| conserved hypothetical protein [Corynebacterium genitalium ATCC 33030] Length=316 Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 111/304 (37%), Positives = 161/304 (53%), Gaps = 20/304 (6%) Query 9 VSLAAVFLALAMGVVLGSGFFSDTLLSSLRSEKRDLYTQIDRLTDQRDALREKLSAADNF 68 ++L A+ +A AM + + F + S+ E++D D R+A A Sbjct 24 IALGALVVAPAMAPIANNSFNNIGGSSTPEGEQKD-----KGRADNREANAANALLA--- 75 Query 69 DIQVGSRIVHDALVGKSVVIFRTPDAHDDDIAAVSKIVGQAGGAVTATVSLTQEFVEANS 128 Q +RIV L G+ +I RTPDA+DDD++ S + AGG ++LT +F+ + Sbjct 76 --QSSTRIVDGTLTGRPYLIIRTPDANDDDVSTTSWLAEMAGGTKAGQITLTDKFLSQDG 133 Query 129 AEKLRSVVNSSILPAGSQLSTKLVDQGSQAGDLLGIALLSNADPAAPTVEQAQRDTVLAA 188 A++LRS++ ++ LPAG+QLS G AG+ LG AL+ + AP R VL Sbjct 134 ADELRSII-ANTLPAGAQLSVDNQAPGIHAGESLGAALMFDQATGAPLATVEDRAMVLQT 192 Query 189 LRETGFITYQPRDRIGTANATVVVTGGALSTDAGNQGVS--VARFAAALAPRGSGTLLAG 246 LRE GF+ Y+ I A +V TG A + GN+ S +A A L RG +LAG Sbjct 193 LREAGFLEYE-DGTITPAQGIIVATGEA---EGGNEFASNVLADLARGLDSRGDSVVLAG 248 Query 247 RDGSANRPAAVAVTRADADMAAE-ISTVDDIDAEPGRITVILALHDLINGGHVGHYGTGH 305 R G+A +AV R DA A E ISTVD +++E GRI+ +LAL + INGG G YG+ Sbjct 249 RRGAAEDKGPIAVVR-DAPKANENISTVDSLESETGRISAVLALAEQINGGS-GSYGSAD 306 Query 306 GAMS 309 A + Sbjct 307 NAQA 310 >gi|337290646|ref|YP_004629667.1| hypothetical protein CULC22_01038 [Corynebacterium ulcerans BR-AD22] gi|334698952|gb|AEG83748.1| putative secreted protein [Corynebacterium ulcerans BR-AD22] Length=317 Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 94/283 (34%), Positives = 158/283 (56%), Gaps = 2/283 (0%) Query 12 AAVFLALAMGVVLGSGFFSDTLLSSLRSEKRDLYTQIDRLTDQRDALREKLSAADNFDIQ 71 A + LA+G+ LG+ S L ++ L + D ++ D + S+AD+F + Sbjct 13 AGLAFGLAIGLGLGTYVLSPNLSGGSSHQRLTLEKERDEARERADIQAAQASSADHFVDK 72 Query 72 VGSRIVHDALVGKSVVIFRTPDAHDDDIAAVSKIVGQAGGAVTATVSLTQEFVEANSAEK 131 + + ++ D L + +++ RT D+ D+D A+S+ + +AG + T+SLT++F + A+ Sbjct 73 LAASVLPDTLKERPILMIRTADSSDEDAKALSEDLKRAGAINSGTISLTEKFFAQDGADG 132 Query 132 LRSVVNSSILPAGSQLSTKLVDQGSQAGDLLGIALLSNADPAAPTVEQAQRDTVLAALRE 191 L+++V S++LPAG+QLST +D G+ AG++LG AL N A + +R VL ALRE Sbjct 133 LKNIV-STVLPAGAQLSTDKLDPGTHAGEVLGSALTLNPQDAKEQATRDERSLVLNALRE 191 Query 192 TGFITYQPRDRIGTANATVVVTGGALSTDAGNQGVSVARFAAALAPRGSGTLLAGRDGSA 251 G+++Y+ I A A VV+ G + A + F AL RGSG + AGR A Sbjct 192 GGYLSYE-EGTILPAQAVVVLGGDSDGVGADFTVKNQVSFVEALDSRGSGVVFAGRIHMA 250 Query 252 NRPAAVAVTRADADMAAEISTVDDIDAEPGRITVILALHDLIN 294 A+ RA+ A+++S+VD ID G+I +LAL + ++ Sbjct 251 ADSGALGKLRANKKAASQVSSVDSIDRSWGKIATVLALKEQLS 293 >gi|334696759|gb|AEG81556.1| putative secreted protein [Corynebacterium ulcerans 809] Length=317 Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 93/283 (33%), Positives = 157/283 (56%), Gaps = 2/283 (0%) Query 12 AAVFLALAMGVVLGSGFFSDTLLSSLRSEKRDLYTQIDRLTDQRDALREKLSAADNFDIQ 71 A + LA+G+ LG+ S L ++ L + D ++ D + S+AD+F + Sbjct 13 AGLAFGLAIGLGLGTYVLSPNLSGGSSHQRLTLEKERDEARERADIQAAQASSADHFVDK 72 Query 72 VGSRIVHDALVGKSVVIFRTPDAHDDDIAAVSKIVGQAGGAVTATVSLTQEFVEANSAEK 131 + + ++ D L + +++ RT D+ D+D A+S+ + +AG + T+SLT++F + A+ Sbjct 73 LAASVLPDTLKERPILMIRTADSSDEDAKALSEDLKRAGAINSGTISLTEKFFAQDGADG 132 Query 132 LRSVVNSSILPAGSQLSTKLVDQGSQAGDLLGIALLSNADPAAPTVEQAQRDTVLAALRE 191 L+++V S++LPAG+QLST +D G+ AG++LG AL N A + +R VL ALRE Sbjct 133 LKNIV-STVLPAGAQLSTDKLDPGTHAGEVLGSALTLNPQDAKEQATRDERSLVLNALRE 191 Query 192 TGFITYQPRDRIGTANATVVVTGGALSTDAGNQGVSVARFAAALAPRGSGTLLAGRDGSA 251 G+++Y+ I A A VV+ G + A + F AL RGSG + AGR A Sbjct 192 GGYLSYE-EGTILPAQAVVVLGGDSDGVGADFTVKNQVSFVEALDSRGSGVVFAGRIHMA 250 Query 252 NRPAAVAVTRADADMAAEISTVDDIDAEPGRITVILALHDLIN 294 A+ RA+ +++S+VD ID G+I +LAL + ++ Sbjct 251 ADSGALGKLRANKKATSQVSSVDSIDRSWGKIATVLALKEQLS 293 >gi|38233774|ref|NP_939541.1| hypothetical protein DIP1184 [Corynebacterium diphtheriae NCTC 13129] gi|38200035|emb|CAE49710.1| Putative secreted protein [Corynebacterium diphtheriae] Length=316 Score = 129 bits (323), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 99/301 (33%), Positives = 159/301 (53%), Gaps = 15/301 (4%) Query 8 AVSLAAVFLALAMGVVLGSGFFSDTLLSSLRSEKRDLYTQIDRLTDQRDAL------REK 61 A ++A + LA+G+ G+G + L ++ + ++R D DAL + + Sbjct 9 ATAIAGLSFGLALGI--GAGMY--VLAPNVAGGPNQTTSTLERERD--DALESAQIAKAQ 62 Query 62 LSAADNFDIQVGSRIVHDALVGKSVVIFRTPDAHDDDIAAVSKIVGQAGGAVTATVSLTQ 121 +AD+ +G I D L K V++FRT D+ D D A+S+ + AG T+ L + Sbjct 63 AKSADSVVSALGRGITTDLLKEKKVLVFRTSDSLDSDADALSEALKSAGAENAGTIKLGE 122 Query 122 EFVEANSAEKLRSVVNSSILPAGSQLSTKLVDQGSQAGDLLGIALLSNADPAAPTVEQAQ 181 +F A+ L++++ ++ LPAG+QLST+ +D G+ AGD LG ALL N D + + Sbjct 123 KFFTQEGADGLKNII-ATTLPAGAQLSTEKMDSGTHAGDALGSALLLNKDDGSEQANKED 181 Query 182 RDTVLAALRETGFITYQPRDRIGTANATVVVTGGALSTDAGNQGVSVARFAAALAPRGSG 241 R VL ALRE+G+I + + A+A V+++G + + A + FA AL +GSG Sbjct 182 RGIVLGALRESGYIDFDEA-SVKPAHAIVLLSGDSDGSKAAFSIKNQVSFATALKSKGSG 240 Query 242 TLLAGRDGSANRPAAVAVTRADADMAAEISTVDDIDAEPGRITVILALHDLINGGHVGHY 301 L+AGR +A+ + R A +ST+D ID +I ILAL + I+ G G Y Sbjct 241 LLVAGRIHTASDAGLLGTIRTSAQDKQAVSTIDSIDQNWAQIAAILALKEQID-GKSGAY 299 Query 302 G 302 G Sbjct 300 G 300 >gi|258654193|ref|YP_003203349.1| hypothetical protein Namu_4070 [Nakamurella multipartita DSM 44233] gi|258557418|gb|ACV80360.1| hypothetical protein Namu_4070 [Nakamurella multipartita DSM 44233] Length=312 Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 110/292 (38%), Positives = 157/292 (54%), Gaps = 10/292 (3%) Query 1 MISLRQHAVSLAAVFLALAMGVVLGSGFFSDTLLSSLRSEKRDLYTQIDRLTDQRDALRE 60 MIS+R H VSLAAVFLALA+G+VLG+ LL LR + L +Q L + L Sbjct 1 MISMRYHIVSLAAVFLALALGIVLGATKIQSPLLEGLRDDNASLSSQQGELASTNEDLTA 60 Query 61 KLSAADNFDIQVGSRIVHDALVGKSVVIFRTPDAHDDDIAAVSKIVGQAGGAVTATVSLT 120 +++A + F VG+ V L +VV+ T A +D A+ ++ +AG VT + LT Sbjct 61 RVAADEKFAGSVGALTVRGTLPSTNVVLVTTAAADPNDRDALLSLLNRAGATVTGQIQLT 120 Query 121 QEFVEANSAEKLRSVVNSSILPAGSQLSTKLVDQGSQAGDLLGIALLSNADPAAPTVEQA 180 +F + A++LR + ++ LP G QL ++ G+ AG LL LL+ A AP Sbjct 121 NDFSDPLRADELRQIATTT-LPTGVQLP-EVPQAGAVAGGLLSSVLLAPAG-GAPKASAE 177 Query 181 QRDTVLAALRETGFITYQPRDRIGTANATVV---VTGGALSTDAGNQGVSVARFAAALAP 237 Q VLAAL+ GFIT G + + VTGG+ + AG +VA FA LA Sbjct 178 QGAAVLAALQSAGFITVTGTPAAGQSVIVLTGAEVTGGSEADKAG----AVASFATQLAQ 233 Query 238 RGSGTLLAGRDGSANRPAAVAVTRADADMAAEISTVDDIDAEPGRITVILAL 289 +G ++AGR GS V V R D M+ +STVD++D++ GRI +LAL Sbjct 234 TATGVVVAGRSGSDESTGTVGVIRGDTAMSGTVSTVDNVDSDTGRIATVLAL 285 >gi|302206101|gb|ADL10443.1| Hypothetical protein CpC231_0965 [Corynebacterium pseudotuberculosis C231] gi|308276338|gb|ADO26237.1| Putative Secreted protein [Corynebacterium pseudotuberculosis I19] gi|341824774|gb|AEK92295.1| Hypothetical protein CpPAT10_0963 [Corynebacterium pseudotuberculosis PAT10] Length=317 Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 91/283 (33%), Positives = 156/283 (56%), Gaps = 2/283 (0%) Query 12 AAVFLALAMGVVLGSGFFSDTLLSSLRSEKRDLYTQIDRLTDQRDALREKLSAADNFDIQ 71 A + LA+G+ LG+ S L ++ L + + ++ D + S+AD+F Sbjct 13 AGLAFGLAIGLGLGTYVLSPNLSGGSGQQRFTLEKERNEARERADIQAAQASSADHFVDT 72 Query 72 VGSRIVHDALVGKSVVIFRTPDAHDDDIAAVSKIVGQAGGAVTATVSLTQEFVEANSAEK 131 + + ++ +L + +++ R + D+D A+ + + +AG + T+SL+++F + A+ Sbjct 73 LAASVLPGSLKERPILLIRMAGSSDEDAKALGEDLKRAGAINSGTISLSEKFFTQDGADG 132 Query 132 LRSVVNSSILPAGSQLSTKLVDQGSQAGDLLGIALLSNADPAAPTVEQAQRDTVLAALRE 191 L+++V S++LPAG+QLST +D G+ AG++LG AL N A + +R+ VL ALRE Sbjct 133 LKNIV-STVLPAGAQLSTDKLDPGTHAGEVLGSALTLNPQDAKEQATRDERNLVLNALRE 191 Query 192 TGFITYQPRDRIGTANATVVVTGGALSTDAGNQGVSVARFAAALAPRGSGTLLAGRDGSA 251 G+++Y+ I A A VV+ G + A + F AL RGSG +LAGR A Sbjct 192 GGYLSYE-EGTILPAQAVVVLGGDSDGAGADFVVKNQVSFVEALDARGSGVVLAGRIHMA 250 Query 252 NRPAAVAVTRADADMAAEISTVDDIDAEPGRITVILALHDLIN 294 A+ RA+ A+++S+VD ID GRI ILAL + ++ Sbjct 251 ADSGAIGKLRANKKAASQVSSVDSIDRSWGRIATILALKEQLS 293 >gi|300858387|ref|YP_003783370.1| hypothetical protein cpfrc_00969 [Corynebacterium pseudotuberculosis FRC41] gi|300685841|gb|ADK28763.1| putative secreted protein [Corynebacterium pseudotuberculosis FRC41] gi|302330654|gb|ADL20848.1| Hypothetical protein Cp1002_0963 [Corynebacterium pseudotuberculosis 1002] Length=317 Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 91/283 (33%), Positives = 156/283 (56%), Gaps = 2/283 (0%) Query 12 AAVFLALAMGVVLGSGFFSDTLLSSLRSEKRDLYTQIDRLTDQRDALREKLSAADNFDIQ 71 A + LA+G+ LG+ S L ++ L + + ++ D + S+AD+F Sbjct 13 AGLAFGLAIGLGLGTYVLSPNLSGGSGQQRFTLEKERNEARERADIQAAQASSADHFVDT 72 Query 72 VGSRIVHDALVGKSVVIFRTPDAHDDDIAAVSKIVGQAGGAVTATVSLTQEFVEANSAEK 131 + + ++ +L + +++ R + D+D A+ + + +AG + T+SL+++F + A+ Sbjct 73 LAASVLPGSLKERPILLIRMAGSSDEDAKALGEDLKRAGAINSGTISLSEKFFAQDGADG 132 Query 132 LRSVVNSSILPAGSQLSTKLVDQGSQAGDLLGIALLSNADPAAPTVEQAQRDTVLAALRE 191 L+++V S++LPAG+QLST +D G+ AG++LG AL N A + +R+ VL ALRE Sbjct 133 LKNIV-STVLPAGAQLSTDKLDPGTHAGEVLGSALTLNPQDAKEQATRDERNLVLNALRE 191 Query 192 TGFITYQPRDRIGTANATVVVTGGALSTDAGNQGVSVARFAAALAPRGSGTLLAGRDGSA 251 G+++Y+ I A A VV+ G + A + F AL RGSG +LAGR A Sbjct 192 GGYLSYE-EGTILPAQAVVVLGGDSDGAGADFVVKNQVSFVEALDARGSGVVLAGRIHMA 250 Query 252 NRPAAVAVTRADADMAAEISTVDDIDAEPGRITVILALHDLIN 294 A+ RA+ A+++S+VD ID GRI ILAL + ++ Sbjct 251 ADSGAIGKLRANKKAASQVSSVDSIDRSWGRIATILALKEQLS 293 >gi|284991433|ref|YP_003409987.1| hypothetical protein Gobs_3006 [Geodermatophilus obscurus DSM 43160] gi|284064678|gb|ADB75616.1| conserved hypothetical protein [Geodermatophilus obscurus DSM 43160] Length=321 Score = 125 bits (315), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 112/316 (36%), Positives = 158/316 (50%), Gaps = 9/316 (2%) Query 1 MISLRQHAVSLAAVFLALAMGVVLGSGFFSDTLLSSLRSEKRDLYTQIDRLTDQRDALRE 60 MI R H VSL AVFLA+A+G+V+G+ + +L L E L L Q L+ Sbjct 1 MIDFRYHLVSLIAVFLAVALGIVIGTTALNAPILEDLEGEVAALAEDKRELETQTRELQA 60 Query 61 KLSAADNFDIQVGSRIVHDALVGKSVVIFRT-PDAHDDDIAAVSKIVGQAGGAVTATVSL 119 ++ +D F+ V +V L G+SVV+ D + + VS +VGQAGG VT TV L Sbjct 61 QVDTSDAFEQAVAPSLVAGNLAGRSVVLVAAGEDVATETVEEVSTLVGQAGGTVTGTVRL 120 Query 120 TQEFVEANSAEKLRSVVNSSILPAGSQLSTKLVDQGSQAGDLLGIALLSNADPAAPTVEQ 179 + + +A +++S V LP G L + D G G LL L+ A P AP + Sbjct 121 QPGYSDPATAAEVQSYVTGPGLPTGVTLP-ETDDTGQLVGSLLARVLMRPAAPGAPAPDT 179 Query 180 AQRDTVLAALRETGFITYQPRDRIGTANATVVVTGGALST-----DAGNQGVSVARFAAA 234 A +VLA LR + + + A+ VV+T GA + DA + ++ A A Sbjct 180 AALSSVLAGLRALDVLDVE-SSSVTPADFAVVLTAGAPAEQDAEQDAAQRTDTLVDLALA 238 Query 235 LAPRGSGTLLAGRDGSANRPAAVAVTRADADMAAEISTVDDIDAEPGRITVILALHDLIN 294 L GSG ++AG SA V V RAD + + +STVD++DA GRI+ +LAL Sbjct 239 LDAAGSGAVVAGDAASAGDTGLVGVIRADPENSVAVSTVDNVDAASGRISTVLALGRESQ 298 Query 295 GGHVGHYGTGHGAMSV 310 G G YGTG A V Sbjct 299 GTS-GAYGTGEDAQPV 313 >gi|296394931|ref|YP_003659815.1| hypothetical protein Srot_2547 [Segniliparus rotundus DSM 44985] gi|296182078|gb|ADG98984.1| conserved hypothetical protein [Segniliparus rotundus DSM 44985] Length=307 Score = 120 bits (300), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 114/311 (37%), Positives = 166/311 (54%), Gaps = 10/311 (3%) Query 1 MISLRQHAVSLAAVFLALAMGVVLGSGFFSDTLLSSLRSEKRDLYTQIDRLTDQRDALRE 60 M+S R A SL AV LA+ +G V+GSG + + K D R + Sbjct 1 MVSFRNFAASLLAVLLAVIIGAVIGSGALAPAPQTPGAGPKAGPAHSADGPNASRTSGSA 60 Query 61 K-LSAADNFDIQVGSRIVHDALVGKSVVIFRTPDAHDDDIAAVSKIVGQAGGAVTATVSL 119 L AD F VG R V L G+SV++ P A D+ AV + +AG ++ + + Sbjct 61 AGLEEADKFARAVGGRAVAGVLSGQSVLVVTVPGAEQGDVDAVKDYLSKAGAQLSGHIGV 120 Query 120 TQEFVEANSAEKLRSVVNSSILPAGSQLSTKLVDQGSQAGDLLGIALLSNADPAAPTVEQ 179 T FV KLR+VV++ I+P G+ L VDQ S+ GD++G L V+ Sbjct 121 TDAFVGTADEAKLRTVVDNIIVP-GAPLDPNNVDQQSRVGDVIGSVLAPQTQD---NVKP 176 Query 180 AQRDTVLAALRETGFITYQPRDRIGTANATVVVTGGALSTDAGNQGVSVARFAAALAPRG 239 +R + LR G+++ A A V+VTGGAL+ D+G++G +VARFA AL R Sbjct 177 EERANAINLLRVNGYLSVA--QDPAPAAAAVIVTGGALAADSGDKGPAVARFAKALRARL 234 Query 240 SGTLLAGRDGSANRPAAVAVTRADADMAAEISTVDDIDAEPGRITVILALHDLINGGHVG 299 ++AGR GS+ AAVA+ R AD A ++S VDD+D+ G++ +LA+ + + GHVG Sbjct 235 PAVVVAGRSGSSGGSAAVALIR--ADKATQLSAVDDLDSPMGQVAAVLAVAEQLQ-GHVG 291 Query 300 HYGTGHGAMSV 310 YGTG GA +V Sbjct 292 QYGTGEGATAV 302 >gi|336325522|ref|YP_004605488.1| hypothetical protein CRES_0968 [Corynebacterium resistens DSM 45100] gi|336101504|gb|AEI09324.1| putative secreted protein [Corynebacterium resistens DSM 45100] Length=297 Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 95/301 (32%), Positives = 150/301 (50%), Gaps = 11/301 (3%) Query 16 LALAMGVVLGSGFFSDTLLSSLRSEKRDLYTQIDRLTDQRDALREKLSAADNFDIQVGSR 75 LA G LG + + S + +++ + R+A K A+D+ V Sbjct 3 FGLAAGTALGFYALAPNVPGGPSSTDSATHRELEEQSAAREAAEGKNKASDSVLEGVADS 62 Query 76 IVHDALVGKSVVIFRTPDAHDDDIAAVSKIVGQAGGAVTATVSLTQEFVEANSAEKLRSV 135 V D L GKSVV+ T DA ++ A ++ +AG VT ++L + ++A S + L+S+ Sbjct 63 AVRDKLSGKSVVLIFTDDASRSEVEATRGLLKKAGAKVTGGLTLNAKALQAASGDNLKSI 122 Query 136 VNSSILPAGSQLSTKLVDQGSQAGDLLGIALLSNADPAAPTVEQAQRDTVLAALRETGFI 195 +S LPAG++LS K + G G LLG AL S A+ T R V +L++ +I Sbjct 123 AANS-LPAGAKLSEKNLSPGMHTGQLLGAALKSGDKAASET----DRGVVFGSLKKPDYI 177 Query 196 TYQPRDRIGTANATVVVTGGALSTDAGNQGVS---VARFAAALAPRGSGTLLAGRDGSAN 252 Y D A+A V++TGG S DA N + +A F+A + +LAG+ GSA Sbjct 178 KYD-GDAPKPADAAVIITGG-QSDDAANGNYATNFLADFSAGVNEAMKNVVLAGQPGSAE 235 Query 253 RPAAVAVTRADADMAAEISTVDDIDAEPGRITVILALHDLINGGHVGHYGTGHGAMSVTV 312 + A+ + R ++ +TVD+ID+ GRIT + L I G GH+G A + +V Sbjct 236 KDGAIGIARGKSEYTESFTTVDNIDSVAGRITAVQGLAREIK-GRSGHFGAAENASAASV 294 Query 313 S 313 + Sbjct 295 N 295 >gi|68535947|ref|YP_250652.1| putative secreted protein [Corynebacterium jeikeium K411] gi|68263546|emb|CAI37034.1| putative secreted protein [Corynebacterium jeikeium K411] Length=310 Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 105/311 (34%), Positives = 153/311 (50%), Gaps = 19/311 (6%) Query 10 SLAAVFLALAMGVVLGS--GFFSDTLLSSLRSEKRDLYTQIDRLTDQ--RDALREKLSAA 65 S V L GV +G+ GFF+ +D + + ++Q R+ + +A+ Sbjct 8 SAGKVIAGLGFGVAVGTALGFFALAPNVPGGPVAKDSSAEQELKSEQTAREKAEGQSTAS 67 Query 66 DNFDIQVGSRIVHDALVGKSVVIFRTPDAHDDDIAAVSKIVGQAGGAVTATVSLTQEFVE 125 D V V D L G SV +F PDA ++ ++ ++V AGG V + +T++ ++ Sbjct 68 DKVLGSVAGPAVRDLLRGSSVDLFVLPDADQANVDSLKRLVKMAGGEVHGVIEVTEKALD 127 Query 126 ANSAEKLRSVVNSSILPAGSQLSTKLVDQGSQAGDLLGIALLSNADPAAPTVEQAQRDTV 185 AN+ + L+S+ +S LPAG++LS +D G G LLG AL + A+ ++ R Sbjct 128 ANNGDTLKSIAANS-LPAGAKLSEDKLDPGMHTGQLLGAALGAGEKEAS----ESDRGVA 182 Query 186 LAALRETGFITYQ---PRDRIGTANATVVVTGG-ALSTDAGNQGVS-VARFAAALAPRGS 240 L AL FI YQ P+ TA+ +VV G A D GN G VA FAA L R Sbjct 183 LGALSNEDFIAYQGEAPK----TADLALVVGGDTADDKDRGNYGTKFVADFAAGLDSRMK 238 Query 241 GTLLAGRDGSANRPAAVAVTRADADMAAEISTVDDIDAEPGRITVILALHDLINGGHVGH 300 G +LA + GSA AV RAD +STVD++D GRI + AL + G GH Sbjct 239 GAVLAAQAGSAEDDGAVGQVRADRAAKEAVSTVDNVDTVAGRIATVRALGQQKD-GKAGH 297 Query 301 YGTGHGAMSVT 311 YG A + T Sbjct 298 YGAAANASNAT 308 Lambda K H 0.316 0.130 0.352 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 543016982550 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40