BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1702c Length=454 Score E Sequences producing significant alignments: (Bits) Value gi|15608840|ref|NP_216218.1| hypothetical protein Rv1702c [Mycob... 925 0.0 gi|289569750|ref|ZP_06449977.1| conserved hypothetical protein [... 922 0.0 gi|167969181|ref|ZP_02551458.1| hypothetical protein MtubH3_1459... 887 0.0 gi|289750257|ref|ZP_06509635.1| conserved hypothetical protein [... 834 0.0 gi|340626708|ref|YP_004745160.1| hypothetical protein MCAN_17121... 778 0.0 gi|339294656|gb|AEJ46767.1| hypothetical protein CCDC5079_1577 [... 700 0.0 gi|254550711|ref|ZP_05141158.1| hypothetical protein Mtube_09679... 693 0.0 gi|289757811|ref|ZP_06517189.1| LOW QUALITY PROTEIN: predicted p... 630 2e-178 gi|183981538|ref|YP_001849829.1| hypothetical protein MMAR_1523 ... 583 2e-164 gi|41409558|ref|NP_962394.1| hypothetical protein MAP3460c [Myco... 570 2e-160 gi|342859854|ref|ZP_08716507.1| hypothetical protein MCOL_13283 ... 565 8e-159 gi|31792322|ref|NP_854815.1| hypothetical protein Mb1159c [Mycob... 561 7e-158 gi|15608268|ref|NP_215644.1| hypothetical protein Rv1128c [Mycob... 561 8e-158 gi|340626141|ref|YP_004744593.1| hypothetical protein MCAN_11371... 560 3e-157 gi|340625131|ref|YP_004743583.1| hypothetical protein MCAN_00981... 558 7e-157 gi|342861356|ref|ZP_08718004.1| hypothetical protein MCOL_20831 ... 548 5e-154 gi|296165225|ref|ZP_06847772.1| REP13E12 repeat protein [Mycobac... 546 4e-153 gi|41408593|ref|NP_961429.1| hypothetical protein MAP2495 [Mycob... 546 4e-153 gi|118466658|ref|YP_882229.1| hypothetical protein MAV_3043 [Myc... 543 2e-152 gi|289749664|ref|ZP_06509042.1| conserved hypothetical protein [... 538 6e-151 gi|296164917|ref|ZP_06847473.1| REP13E12 repeat protein [Mycobac... 536 2e-150 gi|342861192|ref|ZP_08717841.1| hypothetical protein MCOL_20012 ... 536 2e-150 gi|342861564|ref|ZP_08718211.1| hypothetical protein MCOL_21866 ... 536 3e-150 gi|342861726|ref|ZP_08718372.1| hypothetical protein MCOL_22671 ... 536 3e-150 gi|41407563|ref|NP_960399.1| hypothetical protein MAP1465c [Myco... 535 6e-150 gi|240170495|ref|ZP_04749154.1| hypothetical protein MkanA1_1437... 532 6e-149 gi|340628437|ref|YP_004746889.1| hypothetical protein MCAN_34831... 531 1e-148 gi|118464750|ref|YP_883326.1| hypothetical protein MAV_4180 [Myc... 530 2e-148 gi|118617874|ref|YP_906206.1| hypothetical protein MUL_2371 [Myc... 528 6e-148 gi|183983120|ref|YP_001851411.1| hypothetical protein MMAR_3121 ... 526 2e-147 gi|340628249|ref|YP_004746701.1| hypothetical protein MCAN_32901... 525 8e-147 gi|118464603|ref|YP_881555.1| hypothetical protein MAV_2352 [Myc... 524 1e-146 gi|240172437|ref|ZP_04751096.1| hypothetical protein MkanA1_2419... 521 1e-145 gi|41407530|ref|NP_960366.1| hypothetical protein MAP1432 [Mycob... 520 2e-145 gi|118465560|ref|YP_882185.1| hypothetical protein MAV_2999 [Myc... 518 6e-145 gi|41409430|ref|NP_962266.1| hypothetical protein MAP3332 [Mycob... 516 2e-144 gi|118464547|ref|YP_880668.1| hypothetical protein MAV_1426 [Myc... 515 7e-144 gi|15840566|ref|NP_335603.1| hypothetical protein MT1160 [Mycoba... 513 3e-143 gi|254823500|ref|ZP_05228501.1| hypothetical protein MintA_26458... 510 2e-142 gi|254775286|ref|ZP_05216802.1| hypothetical protein MaviaA2_115... 508 1e-141 gi|333991762|ref|YP_004524376.1| hypothetical protein JDM601_312... 506 3e-141 gi|41407982|ref|NP_960818.1| hypothetical protein MAP1884c [Myco... 506 4e-141 gi|118463168|ref|YP_881993.1| hypothetical protein MAV_2806 [Myc... 505 8e-141 gi|254818822|ref|ZP_05223823.1| hypothetical protein MintA_02799... 503 2e-140 gi|15840590|ref|NP_335627.1| hypothetical protein MT1183 [Mycoba... 502 5e-140 gi|254820262|ref|ZP_05225263.1| hypothetical protein MintA_10056... 502 6e-140 gi|333991217|ref|YP_004523831.1| hypothetical protein JDM601_257... 501 9e-140 gi|339631213|ref|YP_004722855.1| hypothetical protein MAF_11650 ... 500 2e-139 gi|254550150|ref|ZP_05140597.1| hypothetical protein Mtube_06779... 500 2e-139 gi|167969293|ref|ZP_02551570.1| hypothetical protein MtubH3_1520... 499 3e-139 >gi|15608840|ref|NP_216218.1| hypothetical protein Rv1702c [Mycobacterium tuberculosis H37Rv] gi|15841159|ref|NP_336196.1| hypothetical protein MT1741 [Mycobacterium tuberculosis CDC1551] gi|31792888|ref|NP_855381.1| hypothetical protein Mb1728c [Mycobacterium bovis AF2122/97] 67 more sequence titles Length=454 Score = 925 bits (2391), Expect = 0.0, Method: Compositional matrix adjust. Identities = 454/454 (100%), Positives = 454/454 (100%), Gaps = 0/454 (0%) Query 1 MYSSSREEAVAAFDNLDTALNRVLKVSPDDLTIPECLAMLQRCEKIRRRLPAAEHPFINK 60 MYSSSREEAVAAFDNLDTALNRVLKVSPDDLTIPECLAMLQRCEKIRRRLPAAEHPFINK Sbjct 1 MYSSSREEAVAAFDNLDTALNRVLKVSPDDLTIPECLAMLQRCEKIRRRLPAAEHPFINK 60 Query 61 LADQTDQTELGGKLPFALAERLHISRGEASRRIHEAADLGPRRTLTGQPLPPLLTATAAA 120 LADQTDQTELGGKLPFALAERLHISRGEASRRIHEAADLGPRRTLTGQPLPPLLTATAAA Sbjct 61 LADQTDQTELGGKLPFALAERLHISRGEASRRIHEAADLGPRRTLTGQPLPPLLTATAAA 120 Query 121 QRAGHLGPAHVQVIRCFLHQLPHHVDLPTREKAEAELATLGGRFRPDQLHKLATKLADCL 180 QRAGHLGPAHVQVIRCFLHQLPHHVDLPTREKAEAELATLGGRFRPDQLHKLATKLADCL Sbjct 121 QRAGHLGPAHVQVIRCFLHQLPHHVDLPTREKAEAELATLGGRFRPDQLHKLATKLADCL 180 Query 181 NPDGNYNDTDRARRRSIILGNQGPDGMSAISGYLTPEARATVDAVLAKLAAPGMANPADD 240 NPDGNYNDTDRARRRSIILGNQGPDGMSAISGYLTPEARATVDAVLAKLAAPGMANPADD Sbjct 181 NPDGNYNDTDRARRRSIILGNQGPDGMSAISGYLTPEARATVDAVLAKLAAPGMANPADD 240 Query 241 TPCLAGTPSQAAIEADTRSAGQRHHDGLLAALRALLCSGELGQHNGLPAAIIVSTSLTEL 300 TPCLAGTPSQAAIEADTRSAGQRHHDGLLAALRALLCSGELGQHNGLPAAIIVSTSLTEL Sbjct 241 TPCLAGTPSQAAIEADTRSAGQRHHDGLLAALRALLCSGELGQHNGLPAAIIVSTSLTEL 300 Query 301 QSRAGHALTGGGTLLPMSDVIRLASHANHYLRIFDHGRELALYHTKRLASPGQRIVLYAK 360 QSRAGHALTGGGTLLPMSDVIRLASHANHYLRIFDHGRELALYHTKRLASPGQRIVLYAK Sbjct 301 QSRAGHALTGGGTLLPMSDVIRLASHANHYLRIFDHGRELALYHTKRLASPGQRIVLYAK 360 Query 361 DRGCSFPNCDVPGYLTEVHHVTDFAQCQETDINELTQGCGPHHQLATTGGWITRKRKDGT 420 DRGCSFPNCDVPGYLTEVHHVTDFAQCQETDINELTQGCGPHHQLATTGGWITRKRKDGT Sbjct 361 DRGCSFPNCDVPGYLTEVHHVTDFAQCQETDINELTQGCGPHHQLATTGGWITRKRKDGT 420 Query 421 TEWLPPAHLDHGQPRTNSYFHPEKLLHDSDEDDP 454 TEWLPPAHLDHGQPRTNSYFHPEKLLHDSDEDDP Sbjct 421 TEWLPPAHLDHGQPRTNSYFHPEKLLHDSDEDDP 454 >gi|289569750|ref|ZP_06449977.1| conserved hypothetical protein [Mycobacterium tuberculosis T17] gi|289543504|gb|EFD47152.1| conserved hypothetical protein [Mycobacterium tuberculosis T17] Length=454 Score = 922 bits (2383), Expect = 0.0, Method: Compositional matrix adjust. Identities = 453/454 (99%), Positives = 453/454 (99%), Gaps = 0/454 (0%) Query 1 MYSSSREEAVAAFDNLDTALNRVLKVSPDDLTIPECLAMLQRCEKIRRRLPAAEHPFINK 60 MYSSSREEAVAAFDNLDTALNRVLKVSPDDLTIPECLAMLQRCEKIRRRLPAAEHPFINK Sbjct 1 MYSSSREEAVAAFDNLDTALNRVLKVSPDDLTIPECLAMLQRCEKIRRRLPAAEHPFINK 60 Query 61 LADQTDQTELGGKLPFALAERLHISRGEASRRIHEAADLGPRRTLTGQPLPPLLTATAAA 120 LADQTDQTELGGKLPFALAERLHISRGEASRRIHEAADLGPRRTLTGQPLPPLLTATAAA Sbjct 61 LADQTDQTELGGKLPFALAERLHISRGEASRRIHEAADLGPRRTLTGQPLPPLLTATAAA 120 Query 121 QRAGHLGPAHVQVIRCFLHQLPHHVDLPTREKAEAELATLGGRFRPDQLHKLATKLADCL 180 QRAGHLGPAHVQVIRCFLHQLPHHVDLPTREKAEAELATLGGRFRPDQLHKLATKLADCL Sbjct 121 QRAGHLGPAHVQVIRCFLHQLPHHVDLPTREKAEAELATLGGRFRPDQLHKLATKLADCL 180 Query 181 NPDGNYNDTDRARRRSIILGNQGPDGMSAISGYLTPEARATVDAVLAKLAAPGMANPADD 240 NPDGNYNDTDRARRRSIILGNQGPDGMSAISGYLTPEARATVDAVLAKLAAPGMANPADD Sbjct 181 NPDGNYNDTDRARRRSIILGNQGPDGMSAISGYLTPEARATVDAVLAKLAAPGMANPADD 240 Query 241 TPCLAGTPSQAAIEADTRSAGQRHHDGLLAALRALLCSGELGQHNGLPAAIIVSTSLTEL 300 TPCLAGTPSQAAIEADTRSAGQRHHDGLLAALRALLCSGELGQHNGLPAAIIVSTSLTEL Sbjct 241 TPCLAGTPSQAAIEADTRSAGQRHHDGLLAALRALLCSGELGQHNGLPAAIIVSTSLTEL 300 Query 301 QSRAGHALTGGGTLLPMSDVIRLASHANHYLRIFDHGRELALYHTKRLASPGQRIVLYAK 360 QSRAGHALTGGGTLLPMSDVIRLASHANHYLRIFDHGRELALYHTKRLASPGQRIVLYAK Sbjct 301 QSRAGHALTGGGTLLPMSDVIRLASHANHYLRIFDHGRELALYHTKRLASPGQRIVLYAK 360 Query 361 DRGCSFPNCDVPGYLTEVHHVTDFAQCQETDINELTQGCGPHHQLATTGGWITRKRKDGT 420 DRGCSFPNCDVPGYLTEVHHVTDFAQ QETDINELTQGCGPHHQLATTGGWITRKRKDGT Sbjct 361 DRGCSFPNCDVPGYLTEVHHVTDFAQSQETDINELTQGCGPHHQLATTGGWITRKRKDGT 420 Query 421 TEWLPPAHLDHGQPRTNSYFHPEKLLHDSDEDDP 454 TEWLPPAHLDHGQPRTNSYFHPEKLLHDSDEDDP Sbjct 421 TEWLPPAHLDHGQPRTNSYFHPEKLLHDSDEDDP 454 >gi|167969181|ref|ZP_02551458.1| hypothetical protein MtubH3_14595 [Mycobacterium tuberculosis H37Ra] Length=467 Score = 887 bits (2292), Expect = 0.0, Method: Compositional matrix adjust. Identities = 436/444 (99%), Positives = 437/444 (99%), Gaps = 0/444 (0%) Query 1 MYSSSREEAVAAFDNLDTALNRVLKVSPDDLTIPECLAMLQRCEKIRRRLPAAEHPFINK 60 MYSSSREEAVAAFDNLDTALNRVLKVSPDDLTIPECLAMLQRCEKIRRRLPAAEHPFINK Sbjct 1 MYSSSREEAVAAFDNLDTALNRVLKVSPDDLTIPECLAMLQRCEKIRRRLPAAEHPFINK 60 Query 61 LADQTDQTELGGKLPFALAERLHISRGEASRRIHEAADLGPRRTLTGQPLPPLLTATAAA 120 LADQTDQTELGGKLPFALAERLHISRGEASRRIHEAADLGPRRTLTGQPLPPLLTATAAA Sbjct 61 LADQTDQTELGGKLPFALAERLHISRGEASRRIHEAADLGPRRTLTGQPLPPLLTATAAA 120 Query 121 QRAGHLGPAHVQVIRCFLHQLPHHVDLPTREKAEAELATLGGRFRPDQLHKLATKLADCL 180 QRAGHLGPAHVQVIRCFLHQLPHHVDLPTREKAEAELATLGGRFRPDQLHKLATKLADCL Sbjct 121 QRAGHLGPAHVQVIRCFLHQLPHHVDLPTREKAEAELATLGGRFRPDQLHKLATKLADCL 180 Query 181 NPDGNYNDTDRARRRSIILGNQGPDGMSAISGYLTPEARATVDAVLAKLAAPGMANPADD 240 NPDGNYNDTDRARRRSIILGNQGPDGMSAISGYLTPEARATVDAVLAKLAAPGMANPADD Sbjct 181 NPDGNYNDTDRARRRSIILGNQGPDGMSAISGYLTPEARATVDAVLAKLAAPGMANPADD 240 Query 241 TPCLAGTPSQAAIEADTRSAGQRHHDGLLAALRALLCSGELGQHNGLPAAIIVSTSLTEL 300 TPCLAGTPSQAAIEADTRSAGQRHHDGLLAALRALLCSGELGQHNGLPAAIIVSTSLTEL Sbjct 241 TPCLAGTPSQAAIEADTRSAGQRHHDGLLAALRALLCSGELGQHNGLPAAIIVSTSLTEL 300 Query 301 QSRAGHALTGGGTLLPMSDVIRLASHANHYLRIFDHGRELALYHTKRLASPGQRIVLYAK 360 QSRAGHALTGGGTLLPMSDVIRLASHANHYLRIFDHGRELALYHTKRLASPGQRIVLYAK Sbjct 301 QSRAGHALTGGGTLLPMSDVIRLASHANHYLRIFDHGRELALYHTKRLASPGQRIVLYAK 360 Query 361 DRGCSFPNCDVPGYLTEVHHVTDFAQCQETDINELTQGCGPHHQLATTGGWITRKRKDGT 420 DRGCSFPNCDVPGYLTEVHHVTDFAQCQETDINELTQGCGPHHQLATTGGWITRKRKDGT Sbjct 361 DRGCSFPNCDVPGYLTEVHHVTDFAQCQETDINELTQGCGPHHQLATTGGWITRKRKDGT 420 Query 421 TEWLPPAHLDHGQPRTNSYFHPEK 444 TEWLPPAHLDHGQP F P+ Sbjct 421 TEWLPPAHLDHGQPAPTVTFTPKN 444 >gi|289750257|ref|ZP_06509635.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] gi|289690844|gb|EFD58273.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] Length=457 Score = 834 bits (2154), Expect = 0.0, Method: Compositional matrix adjust. Identities = 436/457 (96%), Positives = 436/457 (96%), Gaps = 3/457 (0%) Query 1 MYSSSREEAVAAFDNLDTALNRVLKVSPDDLTIPECLAMLQRCEKIRRRLPAAEHPFINK 60 MYSSSREEAVAAFDNLDTALNRVLKVSPDDLTIPECLAMLQRCEKIRRRLPAAEHPFINK Sbjct 1 MYSSSREEAVAAFDNLDTALNRVLKVSPDDLTIPECLAMLQRCEKIRRRLPAAEHPFINK 60 Query 61 LADQTDQTELGGKLPFALAERLHISRGEASRRIHEAADLGPRRTLTGQPLPPLLTATAAA 120 LADQTDQTELGGKLPFALAERLHISRGEASRRIHEAADLGPRRTLTGQPLPPLLTATAAA Sbjct 61 LADQTDQTELGGKLPFALAERLHISRGEASRRIHEAADLGPRRTLTGQPLPPLLTATAAA 120 Query 121 QRAGHLGPAHVQVIRCFLHQLPHHVDLPTREKAEAELATLGGRFRPDQLHKLATKLADCL 180 QRAGHLGPAHVQVIRCFLHQLPHHVDLPTREKAEAELATLGGRFRPDQLHKLATKLADCL Sbjct 121 QRAGHLGPAHVQVIRCFLHQLPHHVDLPTREKAEAELATLGGRFRPDQLHKLATKLADCL 180 Query 181 NPDGNYNDTDRARRRSIILGNQGPDGMSAISGYLTPEARATVDAVLAKLAAPGMANPADD 240 NPDGNYNDTDRARRRSIILGNQGPDGMSAISGYLTPEARATVDAVLAKLAAPGMANPADD Sbjct 181 NPDGNYNDTDRARRRSIILGNQGPDGMSAISGYLTPEARATVDAVLAKLAAPGMANPADD 240 Query 241 TPCLAGTPSQAAIEADTRSAGQRHHDGLLAALRALLCSGELGQHNGLPAAIIVSTSLTEL 300 TPCLAGTPSQAAIEADTRSAGQRHHDGLLAALRALLCSGELGQHNGLPAAIIVSTSLTEL Sbjct 241 TPCLAGTPSQAAIEADTRSAGQRHHDGLLAALRALLCSGELGQHNGLPAAIIVSTSLTEL 300 Query 301 QSRAGHALTGGGTLLPMSDVIRLASHANHYLRIFDHGRELALYHTKRLASPGQRIVLYAK 360 QSRAGHALTGGGTLLPMSDVIRLASHANHYLRIFDHGRELALYHTKRLASPGQRIVLYAK Sbjct 301 QSRAGHALTGGGTLLPMSDVIRLASHANHYLRIFDHGRELALYHTKRLASPGQRIVLYAK 360 Query 361 DRGCSFPNCDVPGYLTEVHHVTDFAQCQETDINELTQGCGPHHQLATTG-GWITRKR-KD 418 DRGCSFPNCDVPGYLTEVHHVTDFAQ QETDINEL QGCGP T GWI D Sbjct 361 DRGCSFPNCDVPGYLTEVHHVTDFAQSQETDINELHQGCGPPPPTGPTTVGWIPPANVND 420 Query 419 GT-TEWLPPAHLDHGQPRTNSYFHPEKLLHDSDEDDP 454 GT PPAHLDHGQPRTNSYFHPEKLLHDSDEDDP Sbjct 421 GTRRNGFPPAHLDHGQPRTNSYFHPEKLLHDSDEDDP 457 >gi|340626708|ref|YP_004745160.1| hypothetical protein MCAN_17121 [Mycobacterium canettii CIPT 140010059] gi|340004898|emb|CCC44044.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059] Length=387 Score = 778 bits (2008), Expect = 0.0, Method: Compositional matrix adjust. Identities = 386/386 (100%), Positives = 386/386 (100%), Gaps = 0/386 (0%) Query 1 MYSSSREEAVAAFDNLDTALNRVLKVSPDDLTIPECLAMLQRCEKIRRRLPAAEHPFINK 60 MYSSSREEAVAAFDNLDTALNRVLKVSPDDLTIPECLAMLQRCEKIRRRLPAAEHPFINK Sbjct 1 MYSSSREEAVAAFDNLDTALNRVLKVSPDDLTIPECLAMLQRCEKIRRRLPAAEHPFINK 60 Query 61 LADQTDQTELGGKLPFALAERLHISRGEASRRIHEAADLGPRRTLTGQPLPPLLTATAAA 120 LADQTDQTELGGKLPFALAERLHISRGEASRRIHEAADLGPRRTLTGQPLPPLLTATAAA Sbjct 61 LADQTDQTELGGKLPFALAERLHISRGEASRRIHEAADLGPRRTLTGQPLPPLLTATAAA 120 Query 121 QRAGHLGPAHVQVIRCFLHQLPHHVDLPTREKAEAELATLGGRFRPDQLHKLATKLADCL 180 QRAGHLGPAHVQVIRCFLHQLPHHVDLPTREKAEAELATLGGRFRPDQLHKLATKLADCL Sbjct 121 QRAGHLGPAHVQVIRCFLHQLPHHVDLPTREKAEAELATLGGRFRPDQLHKLATKLADCL 180 Query 181 NPDGNYNDTDRARRRSIILGNQGPDGMSAISGYLTPEARATVDAVLAKLAAPGMANPADD 240 NPDGNYNDTDRARRRSIILGNQGPDGMSAISGYLTPEARATVDAVLAKLAAPGMANPADD Sbjct 181 NPDGNYNDTDRARRRSIILGNQGPDGMSAISGYLTPEARATVDAVLAKLAAPGMANPADD 240 Query 241 TPCLAGTPSQAAIEADTRSAGQRHHDGLLAALRALLCSGELGQHNGLPAAIIVSTSLTEL 300 TPCLAGTPSQAAIEADTRSAGQRHHDGLLAALRALLCSGELGQHNGLPAAIIVSTSLTEL Sbjct 241 TPCLAGTPSQAAIEADTRSAGQRHHDGLLAALRALLCSGELGQHNGLPAAIIVSTSLTEL 300 Query 301 QSRAGHALTGGGTLLPMSDVIRLASHANHYLRIFDHGRELALYHTKRLASPGQRIVLYAK 360 QSRAGHALTGGGTLLPMSDVIRLASHANHYLRIFDHGRELALYHTKRLASPGQRIVLYAK Sbjct 301 QSRAGHALTGGGTLLPMSDVIRLASHANHYLRIFDHGRELALYHTKRLASPGQRIVLYAK 360 Query 361 DRGCSFPNCDVPGYLTEVHHVTDFAQ 386 DRGCSFPNCDVPGYLTEVHHVTDFAQ Sbjct 361 DRGCSFPNCDVPGYLTEVHHVTDFAQ 386 >gi|339294656|gb|AEJ46767.1| hypothetical protein CCDC5079_1577 [Mycobacterium tuberculosis CCDC5079] Length=342 Score = 700 bits (1806), Expect = 0.0, Method: Compositional matrix adjust. Identities = 341/342 (99%), Positives = 342/342 (100%), Gaps = 0/342 (0%) Query 113 LLTATAAAQRAGHLGPAHVQVIRCFLHQLPHHVDLPTREKAEAELATLGGRFRPDQLHKL 172 +LTATAAAQRAGHLGPAHVQVIRCFLHQLPHHVDLPTREKAEAELATLGGRFRPDQLHKL Sbjct 1 MLTATAAAQRAGHLGPAHVQVIRCFLHQLPHHVDLPTREKAEAELATLGGRFRPDQLHKL 60 Query 173 ATKLADCLNPDGNYNDTDRARRRSIILGNQGPDGMSAISGYLTPEARATVDAVLAKLAAP 232 ATKLADCLNPDGNYNDTDRARRRSIILGNQGPDGMSAISGYLTPEARATVDAVLAKLAAP Sbjct 61 ATKLADCLNPDGNYNDTDRARRRSIILGNQGPDGMSAISGYLTPEARATVDAVLAKLAAP 120 Query 233 GMANPADDTPCLAGTPSQAAIEADTRSAGQRHHDGLLAALRALLCSGELGQHNGLPAAII 292 GMANPADDTPCLAGTPSQAAIEADTRSAGQRHHDGLLAALRALLCSGELGQHNGLPAAII Sbjct 121 GMANPADDTPCLAGTPSQAAIEADTRSAGQRHHDGLLAALRALLCSGELGQHNGLPAAII 180 Query 293 VSTSLTELQSRAGHALTGGGTLLPMSDVIRLASHANHYLRIFDHGRELALYHTKRLASPG 352 VSTSLTELQSRAGHALTGGGTLLPMSDVIRLASHANHYLRIFDHGRELALYHTKRLASPG Sbjct 181 VSTSLTELQSRAGHALTGGGTLLPMSDVIRLASHANHYLRIFDHGRELALYHTKRLASPG 240 Query 353 QRIVLYAKDRGCSFPNCDVPGYLTEVHHVTDFAQCQETDINELTQGCGPHHQLATTGGWI 412 QRIVLYAKDRGCSFPNCDVPGYLTEVHHVTDFAQCQETDINELTQGCGPHHQLATTGGWI Sbjct 241 QRIVLYAKDRGCSFPNCDVPGYLTEVHHVTDFAQCQETDINELTQGCGPHHQLATTGGWI 300 Query 413 TRKRKDGTTEWLPPAHLDHGQPRTNSYFHPEKLLHDSDEDDP 454 TRKRKDGTTEWLPPAHLDHGQPRTNSYFHPEKLLHDSDEDDP Sbjct 301 TRKRKDGTTEWLPPAHLDHGQPRTNSYFHPEKLLHDSDEDDP 342 >gi|254550711|ref|ZP_05141158.1| hypothetical protein Mtube_09679 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] Length=339 Score = 693 bits (1788), Expect = 0.0, Method: Compositional matrix adjust. Identities = 338/338 (100%), Positives = 338/338 (100%), Gaps = 0/338 (0%) Query 117 TAAAQRAGHLGPAHVQVIRCFLHQLPHHVDLPTREKAEAELATLGGRFRPDQLHKLATKL 176 TAAAQRAGHLGPAHVQVIRCFLHQLPHHVDLPTREKAEAELATLGGRFRPDQLHKLATKL Sbjct 2 TAAAQRAGHLGPAHVQVIRCFLHQLPHHVDLPTREKAEAELATLGGRFRPDQLHKLATKL 61 Query 177 ADCLNPDGNYNDTDRARRRSIILGNQGPDGMSAISGYLTPEARATVDAVLAKLAAPGMAN 236 ADCLNPDGNYNDTDRARRRSIILGNQGPDGMSAISGYLTPEARATVDAVLAKLAAPGMAN Sbjct 62 ADCLNPDGNYNDTDRARRRSIILGNQGPDGMSAISGYLTPEARATVDAVLAKLAAPGMAN 121 Query 237 PADDTPCLAGTPSQAAIEADTRSAGQRHHDGLLAALRALLCSGELGQHNGLPAAIIVSTS 296 PADDTPCLAGTPSQAAIEADTRSAGQRHHDGLLAALRALLCSGELGQHNGLPAAIIVSTS Sbjct 122 PADDTPCLAGTPSQAAIEADTRSAGQRHHDGLLAALRALLCSGELGQHNGLPAAIIVSTS 181 Query 297 LTELQSRAGHALTGGGTLLPMSDVIRLASHANHYLRIFDHGRELALYHTKRLASPGQRIV 356 LTELQSRAGHALTGGGTLLPMSDVIRLASHANHYLRIFDHGRELALYHTKRLASPGQRIV Sbjct 182 LTELQSRAGHALTGGGTLLPMSDVIRLASHANHYLRIFDHGRELALYHTKRLASPGQRIV 241 Query 357 LYAKDRGCSFPNCDVPGYLTEVHHVTDFAQCQETDINELTQGCGPHHQLATTGGWITRKR 416 LYAKDRGCSFPNCDVPGYLTEVHHVTDFAQCQETDINELTQGCGPHHQLATTGGWITRKR Sbjct 242 LYAKDRGCSFPNCDVPGYLTEVHHVTDFAQCQETDINELTQGCGPHHQLATTGGWITRKR 301 Query 417 KDGTTEWLPPAHLDHGQPRTNSYFHPEKLLHDSDEDDP 454 KDGTTEWLPPAHLDHGQPRTNSYFHPEKLLHDSDEDDP Sbjct 302 KDGTTEWLPPAHLDHGQPRTNSYFHPEKLLHDSDEDDP 339 >gi|289757811|ref|ZP_06517189.1| LOW QUALITY PROTEIN: predicted protein [Mycobacterium tuberculosis T85] gi|289713375|gb|EFD77387.1| LOW QUALITY PROTEIN: predicted protein [Mycobacterium tuberculosis T85] Length=360 Score = 630 bits (1625), Expect = 2e-178, Method: Compositional matrix adjust. Identities = 310/313 (99%), Positives = 310/313 (99%), Gaps = 0/313 (0%) Query 142 PHHVDLPTREKAEAELATLGGRFRPDQLHKLATKLADCLNPDGNYNDTDRARRRSIILGN 201 P V LPTREKAEAELATLGGRFRPDQLHKLATKLADCLNPDGNYNDTDRARRRSIILGN Sbjct 48 PPCVCLPTREKAEAELATLGGRFRPDQLHKLATKLADCLNPDGNYNDTDRARRRSIILGN 107 Query 202 QGPDGMSAISGYLTPEARATVDAVLAKLAAPGMANPADDTPCLAGTPSQAAIEADTRSAG 261 QGPDGMSAISGYLTPEARATVDAVLAKLAAPGMANPADDTPCLAGTPSQAAIEADTRSAG Sbjct 108 QGPDGMSAISGYLTPEARATVDAVLAKLAAPGMANPADDTPCLAGTPSQAAIEADTRSAG 167 Query 262 QRHHDGLLAALRALLCSGELGQHNGLPAAIIVSTSLTELQSRAGHALTGGGTLLPMSDVI 321 QRHHDGLLAALRALLCSGELGQHNGLPAAIIVSTSLTELQSRAGHALTGGGTLLPMSDVI Sbjct 168 QRHHDGLLAALRALLCSGELGQHNGLPAAIIVSTSLTELQSRAGHALTGGGTLLPMSDVI 227 Query 322 RLASHANHYLRIFDHGRELALYHTKRLASPGQRIVLYAKDRGCSFPNCDVPGYLTEVHHV 381 RLASHANHYLRIFDHGRELALYHTKRLASPGQRIVLYAKDRGCSFPNCDVPGYLTEVHHV Sbjct 228 RLASHANHYLRIFDHGRELALYHTKRLASPGQRIVLYAKDRGCSFPNCDVPGYLTEVHHV 287 Query 382 TDFAQCQETDINELTQGCGPHHQLATTGGWITRKRKDGTTEWLPPAHLDHGQPRTNSYFH 441 TDFAQCQETDINELTQGCGPHHQLATTGGWITRKRKDGTTEWLPPAHLDHGQPRTNSYFH Sbjct 288 TDFAQCQETDINELTQGCGPHHQLATTGGWITRKRKDGTTEWLPPAHLDHGQPRTNSYFH 347 Query 442 PEKLLHDSDEDDP 454 PEKLLHDSDEDDP Sbjct 348 PEKLLHDSDEDDP 360 >gi|183981538|ref|YP_001849829.1| hypothetical protein MMAR_1523 [Mycobacterium marinum M] gi|183174864|gb|ACC39974.1| conserved hypothetical protein [Mycobacterium marinum M] Length=457 Score = 583 bits (1504), Expect = 2e-164, Method: Compositional matrix adjust. Identities = 293/453 (65%), Positives = 341/453 (76%), Gaps = 1/453 (0%) Query 1 MYSSSREEAVAAFDNLDTALNRVLKVSPDDLTIPECLAMLQRCEKIRRRLPAAEHPFINK 60 M S SREE VAAFD LD + R+ + D LT PE LA+LQRCE RRRLP+ EHP IN+ Sbjct 1 MSSMSREEVVAAFDALDAVMARLQDLCFDGLTTPERLALLQRCEVARRRLPSIEHPLINQ 60 Query 61 LADQTDQTELGGKLPFALAERLHISRGEASRRIHEAADLGPRRTLTGQPLPPLLTATAAA 120 L +Q + ELGGKL LA RL +SRGEASRR+ EAADLGPRR LTG+ L PLL+ATA+A Sbjct 61 LVEQAGEQELGGKLAAVLAGRLRVSRGEASRRLREAADLGPRRALTGEQLAPLLSATASA 120 Query 121 QRAGHLGPAHVQVIRCFLHQLPHHVDLPTREKAEAELATLGGRFRPDQLHKLATKLADCL 180 R G +G HV+VIR F Q+P VDL TRE+AEA LA L G+FRPDQL KLA +L DC+ Sbjct 121 VRQGRIGAGHVRVIREFCGQVPAEVDLETRERAEAHLARLAGQFRPDQLAKLAQRLMDCV 180 Query 181 NPDGNYNDTDRARRRSIILGNQGPDGMSAISGYLTPEARATVDAVLAKLAAPGMANPADD 240 NPDG Y+D DRARRR + LG QG DGMS ISG+LTPEARA +DAVLAKLAAPGM NP D+ Sbjct 181 NPDGRYSDEDRARRRGLTLGRQGRDGMSRISGWLTPEARAGLDAVLAKLAAPGMCNPDDE 240 Query 241 TPCLAGTPSQAAIEADTRSAGQRHHDGLLAALRALLCSGELGQHNGLPAAIIVSTSLTEL 300 +P + A+ D RS GQRHHDGL AA+RALL SG+LGQHNGLPA+IIV+T+L EL Sbjct 241 SPVVQAPAGADAVSRDRRSVGQRHHDGLNAAVRALLASGDLGQHNGLPASIIVTTTLGEL 300 Query 301 QSRAGHALTGGGTLLPMSDVIRLASHANHYLRIFDHGRELALYHTKRLASPGQRIVLYAK 360 Q G LTGGGT+LP+SDVIRLA HA+HYL +FD G+ + LYH KRLA+ GQR+VLYAK Sbjct 301 QRACGRGLTGGGTVLPISDVIRLARHAHHYLAVFDRGKAVGLYHAKRLATAGQRLVLYAK 360 Query 361 DRGCSFPNCDVPGYLTEVHHVTDFAQCQETDINELTQGCGPHHQLATTGGWITRKRKDGT 420 DRGC+ P CDVPGY EVHHV +A TDI++LT CGP H+L GW TRK G Sbjct 361 DRGCTRPGCDVPGYQCEVHHVAAWATSGRTDIDQLTLACGPDHKLLEQ-GWRTRKNAHGD 419 Query 421 TEWLPPAHLDHGQPRTNSYFHPEKLLHDSDEDD 453 TEWLPP HLDHGQPRTN+Y HPEKLL DS D+ Sbjct 420 TEWLPPPHLDHGQPRTNTYHHPEKLLRDSAADE 452 >gi|41409558|ref|NP_962394.1| hypothetical protein MAP3460c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398389|gb|AAS06010.1| hypothetical protein MAP_3460c [Mycobacterium avium subsp. paratuberculosis K-10] Length=461 Score = 570 bits (1468), Expect = 2e-160, Method: Compositional matrix adjust. Identities = 294/447 (66%), Positives = 341/447 (77%), Gaps = 0/447 (0%) Query 1 MYSSSREEAVAAFDNLDTALNRVLKVSPDDLTIPECLAMLQRCEKIRRRLPAAEHPFINK 60 M SSREE V FD LD A++R+ ++S D LT ECL++LQRCE +RRRLP EHP IN Sbjct 1 MGCSSREEIVKVFDALDAAVDRLGELSFDALTPRECLSLLQRCETVRRRLPVPEHPLINA 60 Query 61 LADQTDQTELGGKLPFALAERLHISRGEASRRIHEAADLGPRRTLTGQPLPPLLTATAAA 120 LA ELGG+L A+AE ISR EA+RR+H AADLGPR LTG+PLPPLL ATAA Sbjct 61 LARDASPAELGGRLSHAIAEATLISRAEAARRVHTAADLGPRVGLTGEPLPPLLAATAAR 120 Query 121 QRAGHLGPAHVQVIRCFLHQLPHHVDLPTREKAEAELATLGGRFRPDQLHKLATKLADCL 180 QR G LG V VIR F HQLP +D TRE+AEA+LA G R+RP+QL LA LADCL Sbjct 121 QREGSLGLEQVAVIRKFCHQLPGWIDQATRERAEADLAREGTRYRPEQLAALAGTLADCL 180 Query 181 NPDGNYNDTDRARRRSIILGNQGPDGMSAISGYLTPEARATVDAVLAKLAAPGMANPADD 240 NPDG Y D DRARRRS+ LGNQ DGMS + G+L+PE RAT++AVLAKLAAPGM NP D+ Sbjct 181 NPDGLYRDEDRARRRSLTLGNQHADGMSELRGWLSPELRATLEAVLAKLAAPGMCNPLDE 240 Query 241 TPCLAGTPSQAAIEADTRSAGQRHHDGLLAALRALLCSGELGQHNGLPAAIIVSTSLTEL 300 +PC+ GTPSQ AI+ D RSA QR+HDGLLA LRALL SG LGQHNGLPA+IIV+T+L +L Sbjct 241 SPCVEGTPSQHAIDGDARSAAQRNHDGLLAGLRALLASGNLGQHNGLPASIIVTTTLADL 300 Query 301 QSRAGHALTGGGTLLPMSDVIRLASHANHYLRIFDHGRELALYHTKRLASPGQRIVLYAK 360 ++ AG LTGGGTLLPMSDVIRL+ HA+HYL IFD G+ LALYHTKRLASP QRIVLYAK Sbjct 301 ETAAGRRLTGGGTLLPMSDVIRLSRHAHHYLAIFDQGKALALYHTKRLASPAQRIVLYAK 360 Query 361 DRGCSFPNCDVPGYLTEVHHVTDFAQCQETDINELTQGCGPHHQLATTGGWITRKRKDGT 420 DRGC+ P C +PGY +EVHH TD+A C TDIN+LT CGPHH+L G W T K G Sbjct 361 DRGCTAPGCTIPGYYSEVHHCTDYATCHTTDINDLTFACGPHHRLLQPGAWTTHKNAKGE 420 Query 421 TEWLPPAHLDHGQPRTNSYFHPEKLLH 447 TEW+PP HLD QPRTN++ HPEKLL Sbjct 421 TEWIPPPHLDRNQPRTNTFHHPEKLLQ 447 >gi|342859854|ref|ZP_08716507.1| hypothetical protein MCOL_13283 [Mycobacterium colombiense CECT 3035] gi|342132986|gb|EGT86206.1| hypothetical protein MCOL_13283 [Mycobacterium colombiense CECT 3035] Length=453 Score = 565 bits (1455), Expect = 8e-159, Method: Compositional matrix adjust. Identities = 287/446 (65%), Positives = 335/446 (76%), Gaps = 1/446 (0%) Query 1 MYSSSREEAVAAFDNLDTALNRVLKVSPDDLTIPECLAMLQRCEKIRRRLPAAEHPFINK 60 M S REE D L ++R + S D LT PE L ML+ E R+L A H IN+ Sbjct 1 MTLSDREELQHDVDALRAVVSRFREHSYDALTNPERLQMLEVLECEARKLQAPSHQLINQ 60 Query 61 LADQTDQTELGGKLPFALAERLHISRGEASRRIHEAADLGPRRTLTGQPLPPLLTATAAA 120 L +Q D TELGGKL + LA+RLHISR EA RRI EAADLGPRR LTG+PLPP+L ATAAA Sbjct 61 LGEQGDSTELGGKLSWVLADRLHISRAEAGRRIAEAADLGPRRALTGEPLPPVLPATAAA 120 Query 121 QRAGHLGPAHVQVIRCFLHQLPHHVDLPTREKAEAELATLGGRFRPDQLHKLATKLADCL 180 QR G +G HV VIR F HQLP VDL T AE LA FRPDQL KLA +L DCL Sbjct 121 QRDGAIGADHVAVIRRFFHQLPESVDLETCVHAEKHLAAKATEFRPDQLAKLARRLMDCL 180 Query 181 NPDGNYNDTDRARRRSIILGNQGPDGMSAISGYLTPEARATVDAVLAKLAAPGMANPADD 240 NPDG+Y D DRAR R ++LGNQ DGMS +SG+LTPEARA+ +AVLAKLAAPGM NP DD Sbjct 181 NPDGSYTDEDRARMRGLVLGNQQADGMSRLSGWLTPEARASWEAVLAKLAAPGMCNPDDD 240 Query 241 TPCLAGTPSQAAIEADTRSAGQRHHDGLLAALRALLCSGELGQHNGLPAAIIVSTSLTEL 300 TP + G PS+ A++ DTR+ GQR+HDGL AALRA+L SG+LGQHNGLPA+I+V+T+LTEL Sbjct 241 TPAVDGAPSEEAVQRDTRTPGQRNHDGLSAALRAMLASGDLGQHNGLPASIVVTTTLTEL 300 Query 301 QSRAGHALTGGGTLLPMSDVIRLASHANHYLRIFDHGRELALYHTKRLASPGQRIVLYAK 360 ++ AG LTGGGT+LPMSDVIRLA HA+HYL IFD G+ LALYHT+RLASPGQRIVLYAK Sbjct 301 EAAAGKGLTGGGTILPMSDVIRLARHAHHYLAIFDKGKALALYHTRRLASPGQRIVLYAK 360 Query 361 DRGCSFPNCDVPGYLTEVHHVTDFAQCQETDINELTQGCGPHHQLATTGGWITRKRKDGT 420 DRGCS P CD GY EVHHV D+A+ TD+++LT CGPHH+L GW TRKR +G Sbjct 361 DRGCSHPGCDASGYYCEVHHVEDWARTHRTDVDQLTLACGPHHRLLEK-GWATRKRANGD 419 Query 421 TEWLPPAHLDHGQPRTNSYFHPEKLL 446 TEW+PP HLD GQPRTN++ HPE LL Sbjct 420 TEWIPPPHLDRGQPRTNTFHHPEDLL 445 >gi|31792322|ref|NP_854815.1| hypothetical protein Mb1159c [Mycobacterium bovis AF2122/97] gi|121637060|ref|YP_977283.1| hypothetical protein BCG_1189c [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224989533|ref|YP_002644220.1| hypothetical protein JTY_1162 [Mycobacterium bovis BCG str. Tokyo 172] 20 more sequence titles Length=451 Score = 561 bits (1447), Expect = 7e-158, Method: Compositional matrix adjust. Identities = 290/451 (65%), Positives = 343/451 (77%), Gaps = 2/451 (0%) Query 4 SSREEAVAAFDNLDTALNRVLKVSPDDLTIPECLAMLQRCEKIRRRLPAAEHPFINKLAD 63 S+REE AF +L TAL+RVL ++ D LT PE LA+L+ CE RR+LP+ EH IN++ + Sbjct 3 STREEITEAFASLATALSRVLGLTFDALTTPERLALLEHCETARRQLPSVEHTLINQIGE 62 Query 64 QTDQTELGGKLPFALAERLHISRGEASRRIHEAADLGPRRTLTGQPLPPLLTATAAAQRA 123 Q+ + ELGGKL LA+RL I+R EA RR+ EAADLG RR LTG+PLPPLLTATA AQR Sbjct 63 QSTEEELGGKLGLTLADRLRITRSEAKRRVAEAADLGQRRALTGEPLPPLLTATAKAQRH 122 Query 124 GHLGPAHVQVIRCFLHQLPHHVDLPTREKAEAELATLGGRFRPDQLHKLATKLADCLNPD 183 G +G HV+VIR F+H+LP VDL T EKAE +LA ++RPDQL KLA ++ DCLNPD Sbjct 123 GLIGDGHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQATQYRPDQLAKLAARIMDCLNPD 182 Query 184 GNYNDTDRARRRSIILGNQGPDGMSAISGYLTPEARATVDAVLAKLAAPGMANPADDTPC 243 G+Y D DRARRR + LG Q DGMS +SGY+TPE RAT++AV AKLAAPGM NP PC Sbjct 183 GDYTDEDRARRRGLTLGKQDVDGMSRLSGYVTPELRATIEAVWAKLAAPGMCNPEQKAPC 242 Query 244 LAGTPSQAAIEADTRSAGQRHHDGLLAALRALLCSGELGQHNGLPAAIIVSTSLTELQSR 303 + G PS+ DTRS QR+HD L A LR+LL SG LGQHNGLPA+IIV+T+L +L++ Sbjct 243 VNGAPSKEQARRDTRSCPQRNHDALNAGLRSLLTSGNLGQHNGLPASIIVTTTLKDLEAA 302 Query 304 AGHALTGGGTLLPMSDVIRLASHANHYLRIFDHGRELALYHTKRLASPGQRIVLYAKDRG 363 AG LTGGGT+LP+SDVIRLA HANHYL IFD G+ LALYHTKRLASP QRI+LYAKD G Sbjct 303 AGAGLTGGGTILPISDVIRLARHANHYLAIFDRGKALALYHTKRLASPAQRIMLYAKDSG 362 Query 364 CSFPNCDVPGYLTEVHHVTDFAQCQETDINELTQGCGPHHQLATTGGWITRKRKDGTTEW 423 CS P CDVPGY EVHHVT +AQC+ TD+N+LT GCG HH LA GW TRK G TEW Sbjct 363 CSAPGCDVPGYYCEVHHVTPYAQCRNTDVNDLTLGCGGHHPLAER-GWTTRKNAHGDTEW 421 Query 424 LPPAHLDHGQPRTNSYFHPEKLLHDSDEDDP 454 LPP HLDHGQPR N++ HPEKLL D DE DP Sbjct 422 LPPPHLDHGQPRVNTFHHPEKLLAD-DEGDP 451 >gi|15608268|ref|NP_215644.1| hypothetical protein Rv1128c [Mycobacterium tuberculosis H37Rv] gi|148660914|ref|YP_001282437.1| hypothetical protein MRA_1137 [Mycobacterium tuberculosis H37Ra] gi|148822342|ref|YP_001287096.1| hypothetical protein TBFG_11151 [Mycobacterium tuberculosis F11] 41 more sequence titles Length=451 Score = 561 bits (1446), Expect = 8e-158, Method: Compositional matrix adjust. Identities = 290/451 (65%), Positives = 343/451 (77%), Gaps = 2/451 (0%) Query 4 SSREEAVAAFDNLDTALNRVLKVSPDDLTIPECLAMLQRCEKIRRRLPAAEHPFINKLAD 63 S+REE AF +L TAL+RVL ++ D LT PE LA+L+ CE RR+LP+ EH IN++ + Sbjct 3 STREEITEAFASLATALSRVLGLTFDALTTPERLALLEHCETARRQLPSVEHTLINQIGE 62 Query 64 QTDQTELGGKLPFALAERLHISRGEASRRIHEAADLGPRRTLTGQPLPPLLTATAAAQRA 123 Q+ + ELGGKL LA+RL I+R EA RR+ EAADLG RR LTG+PLPPLLTATA AQR Sbjct 63 QSTEEELGGKLGLTLADRLRITRSEAKRRVAEAADLGQRRALTGEPLPPLLTATAKAQRH 122 Query 124 GHLGPAHVQVIRCFLHQLPHHVDLPTREKAEAELATLGGRFRPDQLHKLATKLADCLNPD 183 G +G HV+VIR F+H+LP VDL T EKAE +LA ++RPDQL KLA ++ DCLNPD Sbjct 123 GLIGDGHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQATQYRPDQLAKLAARIMDCLNPD 182 Query 184 GNYNDTDRARRRSIILGNQGPDGMSAISGYLTPEARATVDAVLAKLAAPGMANPADDTPC 243 G+Y D DRARRR + LG Q DGMS +SGY+TPE RAT++AV AKLAAPGM NP PC Sbjct 183 GDYTDEDRARRRGLTLGKQDVDGMSRLSGYVTPELRATIEAVWAKLAAPGMCNPEQKAPC 242 Query 244 LAGTPSQAAIEADTRSAGQRHHDGLLAALRALLCSGELGQHNGLPAAIIVSTSLTELQSR 303 + G PS+ DTRS QR+HD L A LR+LL SG LGQHNGLPA+IIV+T+L +L++ Sbjct 243 VNGAPSKEQARRDTRSCPQRNHDALNAELRSLLTSGNLGQHNGLPASIIVTTTLKDLEAA 302 Query 304 AGHALTGGGTLLPMSDVIRLASHANHYLRIFDHGRELALYHTKRLASPGQRIVLYAKDRG 363 AG LTGGGT+LP+SDVIRLA HANHYL IFD G+ LALYHTKRLASP QRI+LYAKD G Sbjct 303 AGAGLTGGGTILPISDVIRLARHANHYLAIFDRGKALALYHTKRLASPAQRIMLYAKDSG 362 Query 364 CSFPNCDVPGYLTEVHHVTDFAQCQETDINELTQGCGPHHQLATTGGWITRKRKDGTTEW 423 CS P CDVPGY EVHHVT +AQC+ TD+N+LT GCG HH LA GW TRK G TEW Sbjct 363 CSAPGCDVPGYYCEVHHVTPYAQCRNTDVNDLTLGCGGHHPLAER-GWTTRKNAHGDTEW 421 Query 424 LPPAHLDHGQPRTNSYFHPEKLLHDSDEDDP 454 LPP HLDHGQPR N++ HPEKLL D DE DP Sbjct 422 LPPPHLDHGQPRVNTFHHPEKLLAD-DEGDP 451 >gi|340626141|ref|YP_004744593.1| hypothetical protein MCAN_11371 [Mycobacterium canettii CIPT 140010059] gi|340004331|emb|CCC43473.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059] Length=451 Score = 560 bits (1442), Expect = 3e-157, Method: Compositional matrix adjust. Identities = 290/451 (65%), Positives = 342/451 (76%), Gaps = 2/451 (0%) Query 4 SSREEAVAAFDNLDTALNRVLKVSPDDLTIPECLAMLQRCEKIRRRLPAAEHPFINKLAD 63 S+REE AF +L TAL+RVL ++ D LT PE LA+L+ CE RR+LP+ EH IN++ + Sbjct 3 STREEITEAFASLATALSRVLGLTFDALTTPERLALLEHCETARRQLPSVEHTLINQIGE 62 Query 64 QTDQTELGGKLPFALAERLHISRGEASRRIHEAADLGPRRTLTGQPLPPLLTATAAAQRA 123 Q+ + ELGGKL LA+RL I+R EA RR+ EAADLG RR LTG+PLPPLLTATA AQR Sbjct 63 QSTEEELGGKLGLTLADRLRITRSEAKRRVAEAADLGQRRALTGEPLPPLLTATAKAQRH 122 Query 124 GHLGPAHVQVIRCFLHQLPHHVDLPTREKAEAELATLGGRFRPDQLHKLATKLADCLNPD 183 +G HV+VIR F+H+LP VDL T EKAE +LA ++RPDQL KLA ++ DCLNPD Sbjct 123 ELIGDGHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQATQYRPDQLAKLAARIMDCLNPD 182 Query 184 GNYNDTDRARRRSIILGNQGPDGMSAISGYLTPEARATVDAVLAKLAAPGMANPADDTPC 243 G+Y D DRARRR + LG Q DGMS +SGY+TPE RAT++AV AKLAAPGM NP PC Sbjct 183 GDYTDEDRARRRGLTLGKQDVDGMSRLSGYVTPELRATIEAVWAKLAAPGMCNPEQKAPC 242 Query 244 LAGTPSQAAIEADTRSAGQRHHDGLLAALRALLCSGELGQHNGLPAAIIVSTSLTELQSR 303 + G PS+ DTRS QR+HD L A LR+LL SG LGQHNGLPA+IIV+T+L +L++ Sbjct 243 VDGAPSKEQARRDTRSCPQRNHDALNAGLRSLLTSGNLGQHNGLPASIIVTTTLKDLEAA 302 Query 304 AGHALTGGGTLLPMSDVIRLASHANHYLRIFDHGRELALYHTKRLASPGQRIVLYAKDRG 363 AG LTGGGT+LP+SDVIRLA HANHYL IFD G+ LALYHTKRLASP QRIVLYAKD G Sbjct 303 AGAGLTGGGTILPISDVIRLARHANHYLAIFDRGKALALYHTKRLASPAQRIVLYAKDSG 362 Query 364 CSFPNCDVPGYLTEVHHVTDFAQCQETDINELTQGCGPHHQLATTGGWITRKRKDGTTEW 423 CS P CDVPGY EVHHVT +AQC+ TD+N+LT GCG HH LA GW TRK G TEW Sbjct 363 CSAPGCDVPGYYCEVHHVTPYAQCRNTDVNDLTLGCGGHHPLAER-GWTTRKNAHGDTEW 421 Query 424 LPPAHLDHGQPRTNSYFHPEKLLHDSDEDDP 454 LPP HLDHGQPR N++ HPEKLL D DE DP Sbjct 422 LPPPHLDHGQPRVNTFHHPEKLLAD-DEGDP 451 >gi|340625131|ref|YP_004743583.1| hypothetical protein MCAN_00981 [Mycobacterium canettii CIPT 140010059] gi|340003321|emb|CCC42439.1| putative uncharacterized protein [Mycobacterium canettii CIPT 140010059] Length=492 Score = 558 bits (1438), Expect = 7e-157, Method: Compositional matrix adjust. Identities = 282/454 (63%), Positives = 343/454 (76%), Gaps = 2/454 (0%) Query 1 MYSSSREEAVAAFDNLDTALNRVLKVSPDDLTIPECLAMLQRCEKIRRRLPAAEHPFINK 60 M ++SREE V FD LD L+R+ +VS + LT PE LAML+R E++ RRLPA H IN+ Sbjct 40 MLANSREELVEVFDALDAELDRLDEVSFEVLTTPERLAMLERLERLARRLPAVGHALINQ 99 Query 61 LADQTDQTELGGKLPFALAERLHISRGEASRRIHEAADLGPRRTLTGQPLPPLLTATAAA 120 L Q + ELG L ALA RL I++ +A+RRI EAADLGPRR LTG+PL P LTATA A Sbjct 100 LDAQAGEEELGATLCCALANRLRITKPDAARRIAEAADLGPRRALTGEPLAPQLTATATA 159 Query 121 QRAGHLGPAHVQVIRCFLHQLPHHVDLPTREKAEAELATLGGRFRPDQLHKLATKLADCL 180 QR G +G AH++VIR F LP VD+ TRE AEA+LA +RPD+L K A ++ D L Sbjct 160 QRQGLIGEAHIKVIRAFFAHLPAEVDVSTREAAEADLAGKARGYRPDELAKYAQRVMDWL 219 Query 181 NPDGNYNDTDRARRRSIILGNQGPDGMSAISGYLTPEARATVDAVLAKLAAPGMANPADD 240 +PDG++ DT+RAR+R I LGNQ DGMS +SGYLTPEARAT +AVLAKLAAPGM NP D Sbjct 220 HPDGDFTDTERARKRGITLGNQEYDGMSRLSGYLTPEARATFEAVLAKLAAPGMCNPDDH 279 Query 241 TPCLAGTPSQAAIEADTRSAGQRHHDGLLAALRALLCSGELGQHNGLPAAIIVSTSLTEL 300 TP + TP AAI+ DTRS QR+HDGLLA LRAL+ SG+LGQHNGLP +I+V+T+LT+L Sbjct 280 TPVIDTTPDAAAIDRDTRSQAQRNHDGLLAGLRALIASGKLGQHNGLPVSIVVTTTLTDL 339 Query 301 QSRAGHALTGGGTLLPMSDVIRLASHANHYLRIFDHGRELALYHTKRLASPGQRIVLYAK 360 Q+ AG TGGG+LLPM+DVIR+ASHA+HYL IFDHG LALYHTKRLASP QRI+L+A+ Sbjct 340 QNAAGKGFTGGGSLLPMADVIRMASHAHHYLAIFDHGTPLALYHTKRLASPAQRIMLFAR 399 Query 361 DRGCSFPNCDVPGYLTEVHHVTDFAQCQETDINELTQGCGPHHQLATTGGWITRKRKDGT 420 DRGC+ P CD P Y ++ HHV +A + TDI +LT CGP ++LA GWITRK G Sbjct 400 DRGCTKPGCDAPAYHSQAHHVQGWASTRRTDITDLTLACGPDNRLAEK-GWITRKNTKGD 458 Query 421 TEWLPPAHLDHGQPRTNSYFHPEKLLHDSDEDDP 454 TEWLPPAHLDHGQPRTN++ HPEKLL D D+D P Sbjct 459 TEWLPPAHLDHGQPRTNTFHHPEKLLRD-DDDKP 491 >gi|342861356|ref|ZP_08718004.1| hypothetical protein MCOL_20831 [Mycobacterium colombiense CECT 3035] gi|342131256|gb|EGT84537.1| hypothetical protein MCOL_20831 [Mycobacterium colombiense CECT 3035] Length=429 Score = 548 bits (1413), Expect = 5e-154, Method: Compositional matrix adjust. Identities = 286/418 (69%), Positives = 329/418 (79%), Gaps = 0/418 (0%) Query 37 LAMLQRCEKIRRRLPAAEHPFINKLADQTDQTELGGKLPFALAERLHISRGEASRRIHEA 96 LA+L+RCE+ RRR+PA EHP IN LA Q ELG L A+AE ISR EASRRI EA Sbjct 12 LAVLERCERQRRRIPALEHPLINSLARQVPSDELGATLAHAIAEATLISRSEASRRIREA 71 Query 97 ADLGPRRTLTGQPLPPLLTATAAAQRAGHLGPAHVQVIRCFLHQLPHHVDLPTREKAEAE 156 DLGPR LTG+ +PP L ATAAAQR G LG V VIR F HQLP +D+ TRE+AEA+ Sbjct 72 RDLGPRHGLTGESVPPTLAATAAAQRDGTLGTGQVAVIRKFYHQLPGWIDMATRERAEAK 131 Query 157 LATLGGRFRPDQLHKLATKLADCLNPDGNYNDTDRARRRSIILGNQGPDGMSAISGYLTP 216 LAT G R+RP+QL KLA LADCLNPDGNY+D DRAR R + LGNQ DGMSA+ G+LTP Sbjct 132 LATEGTRYRPEQLGKLADLLADCLNPDGNYSDEDRARARGLTLGNQQADGMSALRGWLTP 191 Query 217 EARATVDAVLAKLAAPGMANPADDTPCLAGTPSQAAIEADTRSAGQRHHDGLLAALRALL 276 EARAT++AVLAKLAAPGM NP D+TPC+ G PSQ AIE D RSA QR HDGL AALRA+L Sbjct 192 EARATLEAVLAKLAAPGMCNPLDETPCVDGAPSQEAIERDPRSAAQRSHDGLNAALRAVL 251 Query 277 CSGELGQHNGLPAAIIVSTSLTELQSRAGHALTGGGTLLPMSDVIRLASHANHYLRIFDH 336 SG++GQHNGLPA+I+V+T+L +L++ G LTGGGTLLPMSDVIRLA HA+HYL IFD Sbjct 252 ASGKVGQHNGLPASIVVTTTLQDLEAATGRGLTGGGTLLPMSDVIRLARHAHHYLAIFDK 311 Query 337 GRELALYHTKRLASPGQRIVLYAKDRGCSFPNCDVPGYLTEVHHVTDFAQCQETDINELT 396 G+ LALYHTKRLASPGQRIVLYAKDRGCS P C VPGY +EVHHVTD+A C TD+N+LT Sbjct 312 GKALALYHTKRLASPGQRIVLYAKDRGCSNPGCTVPGYYSEVHHVTDWATCHTTDVNDLT 371 Query 397 QGCGPHHQLATTGGWITRKRKDGTTEWLPPAHLDHGQPRTNSYFHPEKLLHDSDEDDP 454 CGPHH+L GGW+TRK TEW+PP HLD GQPRTN++ HPEKLLHD D+D P Sbjct 372 FACGPHHRLLQPGGWMTRKNTKADTEWVPPPHLDRGQPRTNTFHHPEKLLHDRDDDVP 429 >gi|296165225|ref|ZP_06847772.1| REP13E12 repeat protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295899414|gb|EFG78873.1| REP13E12 repeat protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=458 Score = 546 bits (1406), Expect = 4e-153, Method: Compositional matrix adjust. Identities = 283/453 (63%), Positives = 341/453 (76%), Gaps = 1/453 (0%) Query 1 MYSSSREEAVAAFDNLDTALNRVLKVSPDDLTIPECLAMLQRCEKIRRRLPAAEHPFINK 60 M + RE+ A + L A R+ S LT PE L +L+ E + R+L A H IN+ Sbjct 1 MGLTDREQIAADVEALCAAAARLQGHSYAALTTPERLGILETLEGVTRKLQAPSHELINQ 60 Query 61 LADQTDQTELGGKLPFALAERLHISRGEASRRIHEAADLGPRRTLTGQPLPPLLTATAAA 120 L +Q D ELGG+L +ALA+RLHISRGEASRR+ EAA+LGPRR L+G+PL P+L ATAAA Sbjct 61 LGEQADSAELGGRLSWALADRLHISRGEASRRVAEAAELGPRRALSGEPLAPVLAATAAA 120 Query 121 QRAGHLGPAHVQVIRCFLHQLPHHVDLPTREKAEAELATLGGRFRPDQLHKLATKLADCL 180 QRAG +G HV VIR +LP VDL TRE AE LA +RPDQL LA L DCL Sbjct 121 QRAGAIGAEHVAVIRRLFRRLPESVDLDTREHAERHLAAEARHYRPDQLATLARHLMDCL 180 Query 181 NPDGNYNDTDRARRRSIILGNQGPDGMSAISGYLTPEARATVDAVLAKLAAPGMANPADD 240 NPDG+Y D DRAR R ++LGNQ DGMS +SG+LTPEARAT +AVLAKLAAPGM NP D+ Sbjct 181 NPDGHYTDADRARARGLVLGNQQADGMSKLSGWLTPEARATWEAVLAKLAAPGMCNPDDE 240 Query 241 TPCLAGTPSQAAIEADTRSAGQRHHDGLLAALRALLCSGELGQHNGLPAAIIVSTSLTEL 300 P G PS+ A++ DTRS QR+HDGL AALR +L SGELGQHNGLPAAI+V+T+L EL Sbjct 241 APVSDGAPSEEAVQRDTRSPAQRNHDGLNAALRGMLASGELGQHNGLPAAIVVTTTLKEL 300 Query 301 QSRAGHALTGGGTLLPMSDVIRLASHANHYLRIFDHGRELALYHTKRLASPGQRIVLYAK 360 ++ AG LTGGGT+LPMSDVIRLA HA+HYL IFD+ + +ALYHTKRLASPGQRIVLYA+ Sbjct 301 EAAAGRGLTGGGTILPMSDVIRLARHAHHYLAIFDNAKPVALYHTKRLASPGQRIVLYAQ 360 Query 361 DRGCSFPNCDVPGYLTEVHHVTDFAQCQETDINELTQGCGPHHQLATTGGWITRKRKDGT 420 DRGCS P CDVPGYL EVHHVTD+A TDI++LT CGPHH+L GW TRKR +G Sbjct 361 DRGCSHPGCDVPGYLCEVHHVTDWAHTHRTDIDQLTLACGPHHRL-LDNGWTTRKRANGD 419 Query 421 TEWLPPAHLDHGQPRTNSYFHPEKLLHDSDEDD 453 T+W+PP HLDHGQPRTN++ HPEK+L +++E+D Sbjct 420 TDWIPPPHLDHGQPRTNTFHHPEKILAENNEED 452 >gi|41408593|ref|NP_961429.1| hypothetical protein MAP2495 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41396951|gb|AAS04812.1| hypothetical protein MAP_2495 [Mycobacterium avium subsp. paratuberculosis K-10] Length=472 Score = 546 bits (1406), Expect = 4e-153, Method: Compositional matrix adjust. Identities = 283/430 (66%), Positives = 325/430 (76%), Gaps = 0/430 (0%) Query 23 VLKVSPDDLTIPECLAMLQRCEKIRRRLPAAEHPFINKLADQTDQTELGGKLPFALAERL 82 V + D LT ECLA+L RCEK RRRLP AEH IN LA ELGG+L A+AE Sbjct 26 VAALGFDGLTPRECLALLGRCEKARRRLPVAEHQLINALARDATPAELGGRLSHAIAEAT 85 Query 83 HISRGEASRRIHEAADLGPRRTLTGQPLPPLLTATAAAQRAGHLGPAHVQVIRCFLHQLP 142 ISR EA+RR+H AADLGPR LTG+PLPPLL ATAA QR G LG V VIR F HQLP Sbjct 86 LISRAEAARRVHTAADLGPRVGLTGEPLPPLLAATAARQREGSLGLEQVAVIRKFCHQLP 145 Query 143 HHVDLPTREKAEAELATLGGRFRPDQLHKLATKLADCLNPDGNYNDTDRARRRSIILGNQ 202 +D TRE+AEA+LA R+RP+QL LA LADCLNPDG Y D DRARRRS+ LGNQ Sbjct 146 GWIDQATRERAEADLAREATRYRPEQLAALAGTLADCLNPDGLYRDEDRARRRSLTLGNQ 205 Query 203 GPDGMSAISGYLTPEARATVDAVLAKLAAPGMANPADDTPCLAGTPSQAAIEADTRSAGQ 262 DGMS + G+L+PE RAT++AVLAKLAAPGM NP D++PC+ GTPSQ AI+ D RSA Q Sbjct 206 QADGMSELRGWLSPELRATLEAVLAKLAAPGMCNPLDESPCVEGTPSQHAIDGDARSAAQ 265 Query 263 RHHDGLLAALRALLCSGELGQHNGLPAAIIVSTSLTELQSRAGHALTGGGTLLPMSDVIR 322 R+HDGLLA LRALL SG LGQHNGLPA+IIV+T+L +L++ AG LTGGGTLLPMSDVIR Sbjct 266 RNHDGLLAGLRALLASGNLGQHNGLPASIIVTTTLADLETAAGRRLTGGGTLLPMSDVIR 325 Query 323 LASHANHYLRIFDHGRELALYHTKRLASPGQRIVLYAKDRGCSFPNCDVPGYLTEVHHVT 382 L+ HA+HYL IFD G+ LALYHTKRLASP QRIVLYAKDRGC+ P C +PGY +EVHH T Sbjct 326 LSRHAHHYLAIFDQGKALALYHTKRLASPAQRIVLYAKDRGCTAPGCTIPGYYSEVHHCT 385 Query 383 DFAQCQETDINELTQGCGPHHQLATTGGWITRKRKDGTTEWLPPAHLDHGQPRTNSYFHP 442 D+A C TDIN+LT CGPHH+L G W T K G TEW+PP HLD QPRTN++ HP Sbjct 386 DYATCHTTDINDLTFACGPHHRLLQPGAWTTHKNAKGETEWIPPPHLDRNQPRTNTFHHP 445 Query 443 EKLLHDSDED 452 EKLL D+D Sbjct 446 EKLLQGEDDD 455 >gi|118466658|ref|YP_882229.1| hypothetical protein MAV_3043 [Mycobacterium avium 104] gi|118167945|gb|ABK68842.1| conserved hypothetical protein [Mycobacterium avium 104] Length=447 Score = 543 bits (1400), Expect = 2e-152, Method: Compositional matrix adjust. Identities = 293/443 (67%), Positives = 336/443 (76%), Gaps = 0/443 (0%) Query 11 AAFDNLDTALNRVLKVSPDDLTIPECLAMLQRCEKIRRRLPAAEHPFINKLADQTDQTEL 70 AAFD +D AL+ +L L E LA+L RCE++RRRLPA EHP IN LA EL Sbjct 3 AAFDAIDAALDDLLDCDYAALATREKLALLNRCERLRRRLPAIEHPLINALARDASPAEL 62 Query 71 GGKLPFALAERLHISRGEASRRIHEAADLGPRRTLTGQPLPPLLTATAAAQRAGHLGPAH 130 GG+L A+AE ISR EA+RR+H AADLGPR LTG+PLPPLL ATAA QR G LG Sbjct 63 GGRLSHAIAEATLISRAEAARRVHTAADLGPRVGLTGEPLPPLLAATAARQREGSLGLEQ 122 Query 131 VQVIRCFLHQLPHHVDLPTREKAEAELATLGGRFRPDQLHKLATKLADCLNPDGNYNDTD 190 V VIR F HQLP +D TRE+AEA+LA G R+RP+QL LA LADCLNPDG Y D D Sbjct 123 VAVIRKFCHQLPGWIDQATRERAEADLAREGTRYRPEQLAALAGTLADCLNPDGLYRDED 182 Query 191 RARRRSIILGNQGPDGMSAISGYLTPEARATVDAVLAKLAAPGMANPADDTPCLAGTPSQ 250 RARRRS+ LGNQ DGMS + G+L+PE RAT++AVLAKLAAPGM NP D++PC+ GTPSQ Sbjct 183 RARRRSLTLGNQHADGMSELRGWLSPELRATLEAVLAKLAAPGMCNPLDESPCVEGTPSQ 242 Query 251 AAIEADTRSAGQRHHDGLLAALRALLCSGELGQHNGLPAAIIVSTSLTELQSRAGHALTG 310 AIE D RSA QR+HDGLLA LRALL SG LGQHNGLPA+IIV+T+L +L++ AG LTG Sbjct 243 TAIEGDARSAAQRNHDGLLAGLRALLASGNLGQHNGLPASIIVTTTLADLEAAAGRGLTG 302 Query 311 GGTLLPMSDVIRLASHANHYLRIFDHGRELALYHTKRLASPGQRIVLYAKDRGCSFPNCD 370 GGTLLPMSDVIRL+ HA HYL IFDHG+ LALYHTKRLASPGQRIVLYAKDRGC+ P C Sbjct 303 GGTLLPMSDVIRLSRHARHYLAIFDHGKALALYHTKRLASPGQRIVLYAKDRGCTAPGCT 362 Query 371 VPGYLTEVHHVTDFAQCQETDINELTQGCGPHHQLATTGGWITRKRKDGTTEWLPPAHLD 430 VPGY +EVHH TD+A C TDIN+LT CGPHH+L G W T K G TEW+PP HLD Sbjct 363 VPGYYSEVHHCTDYATCHTTDINDLTFACGPHHRLLQPGAWTTHKNAKGETEWIPPPHLD 422 Query 431 HGQPRTNSYFHPEKLLHDSDEDD 453 QPRTN++ HPEKLL D+DD Sbjct 423 RNQPRTNAFHHPEKLLQGEDDDD 445 >gi|289749664|ref|ZP_06509042.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] gi|289690251|gb|EFD57680.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] Length=451 Score = 538 bits (1387), Expect = 6e-151, Method: Compositional matrix adjust. Identities = 282/451 (63%), Positives = 335/451 (75%), Gaps = 2/451 (0%) Query 4 SSREEAVAAFDNLDTALNRVLKVSPDDLTIPECLAMLQRCEKIRRRLPAAEHPFINKLAD 63 S+REE AF +L TAL+RVL ++ D LT PE LA+L+ CE RR+LP+ EH IN++ + Sbjct 3 STREEITEAFASLATALSRVLGLTFDALTTPERLALLEHCETARRQLPSVEHTLINQIGE 62 Query 64 QTDQTELGGKLPFALAERLHISRGEASRRIHEAADLGPRRTLTGQPLPPLLTATAAAQRA 123 Q+ + ELGGKL LA+RL I+R EA RR+ EAADLG RR LTG+PLPPLLTATA AQR Sbjct 63 QSTEEELGGKLGLTLADRLRITRSEAKRRVAEAADLGQRRALTGEPLPPLLTATAKAQRH 122 Query 124 GHLGPAHVQVIRCFLHQLPHHVDLPTREKAEAELATLGGRFRPDQLHKLATKLADCLNPD 183 G +G HV+VIR F+H+LP VDL T EKAE +LA ++RPDQL KLA ++ DCLNPD Sbjct 123 GLIGDGHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQATQYRPDQLAKLAARIMDCLNPD 182 Query 184 GNYNDTDRARRRSIILGNQGPDGMSAISGYLTPEARATVDAVLAKLAAPGMANPADDTPC 243 G+Y D DRARRR + + A Y+TPE RAT++AV AKLAAPGM NP PC Sbjct 183 GDYTDEDRARRRGLDVRKARCRWDVAAQRYVTPELRATIEAVWAKLAAPGMCNPEQKAPC 242 Query 244 LAGTPSQAAIEADTRSAGQRHHDGLLAALRALLCSGELGQHNGLPAAIIVSTSLTELQSR 303 + G PS+ DTRS QR+HD L A LR+LL SG LGQHNGLPA+IIV+T+L +L++ Sbjct 243 VNGAPSKEQARRDTRSCPQRNHDALNAGLRSLLTSGNLGQHNGLPASIIVTTTLKDLEAA 302 Query 304 AGHALTGGGTLLPMSDVIRLASHANHYLRIFDHGRELALYHTKRLASPGQRIVLYAKDRG 363 AG LTGGGT+LP+SDVIRLA HANHYL IFD G+ LALYHTKRLASP QRI+LYAKD G Sbjct 303 AGAGLTGGGTILPISDVIRLARHANHYLAIFDRGKALALYHTKRLASPAQRIMLYAKDSG 362 Query 364 CSFPNCDVPGYLTEVHHVTDFAQCQETDINELTQGCGPHHQLATTGGWITRKRKDGTTEW 423 CS P CDVPGY EVHHVT +AQC+ TD+N+LT GCG HH LA GW TRK G TEW Sbjct 363 CSAPGCDVPGYYCEVHHVTPYAQCRNTDVNDLTLGCGGHHPLAER-GWTTRKNAHGDTEW 421 Query 424 LPPAHLDHGQPRTNSYFHPEKLLHDSDEDDP 454 LPP HLDHGQPR N++ HPEKLL D DE DP Sbjct 422 LPPPHLDHGQPRVNTFHHPEKLLAD-DEGDP 451 >gi|296164917|ref|ZP_06847473.1| REP13E12 repeat protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295899759|gb|EFG79209.1| REP13E12 repeat protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=458 Score = 536 bits (1382), Expect = 2e-150, Method: Compositional matrix adjust. Identities = 279/446 (63%), Positives = 338/446 (76%), Gaps = 1/446 (0%) Query 1 MYSSSREEAVAAFDNLDTALNRVLKVSPDDLTIPECLAMLQRCEKIRRRLPAAEHPFINK 60 M + RE+ A + L A R+ S LT PE L +L+ E + R+L A H IN+ Sbjct 1 MALTDREQIAADVEALCAAAARLQGHSYAALTTPERLGILETLEGVTRKLQAPSHELINQ 60 Query 61 LADQTDQTELGGKLPFALAERLHISRGEASRRIHEAADLGPRRTLTGQPLPPLLTATAAA 120 L +Q D ELGG+L +ALA+RLHISRGEASRR+ EAA+LGPRR L+G+PLPP+L ATAAA Sbjct 61 LGEQADPAELGGRLSWALADRLHISRGEASRRVAEAAELGPRRALSGEPLPPVLAATAAA 120 Query 121 QRAGHLGPAHVQVIRCFLHQLPHHVDLPTREKAEAELATLGGRFRPDQLHKLATKLADCL 180 QRAG +G HV VIR QLP VDL TRE AE LA R+RPDQL LA L DCL Sbjct 121 QRAGAIGSEHVAVIRRLFRQLPESVDLDTREHAERHLAGEATRYRPDQLATLARHLLDCL 180 Query 181 NPDGNYNDTDRARRRSIILGNQGPDGMSAISGYLTPEARATVDAVLAKLAAPGMANPADD 240 +PDG+Y D DRAR R ++LG+Q DGMS +SG+LTPEARAT +AVLAKLAAPGM NP D+ Sbjct 181 HPDGHYTDADRARVRGLVLGHQQADGMSKLSGWLTPEARATWEAVLAKLAAPGMCNPDDE 240 Query 241 TPCLAGTPSQAAIEADTRSAGQRHHDGLLAALRALLCSGELGQHNGLPAAIIVSTSLTEL 300 P + G ++AA++ DTR+A QR+HDGL AALRA+L SG LG+HNGLPA I+V+T+L EL Sbjct 241 APVVDGPATEAAVQRDTRTAAQRNHDGLHAALRAMLASGTLGRHNGLPATIVVTTTLKEL 300 Query 301 QSRAGHALTGGGTLLPMSDVIRLASHANHYLRIFDHGRELALYHTKRLASPGQRIVLYAK 360 ++ AG LTGGGT+LPMSDVIRLA HA+HYL IFD+ + +ALYHTKRLASPGQR+VLYAK Sbjct 301 EAAAGRGLTGGGTILPMSDVIRLARHAHHYLAIFDNAKPVALYHTKRLASPGQRVVLYAK 360 Query 361 DRGCSFPNCDVPGYLTEVHHVTDFAQCQETDINELTQGCGPHHQLATTGGWITRKRKDGT 420 DRGCS P CDVPGYL EVHHVTD+A TDI++LT CGPHH+L GW TRKR +G Sbjct 361 DRGCSHPGCDVPGYLCEVHHVTDWAHTHRTDIDQLTLACGPHHRL-LDNGWTTRKRPNGD 419 Query 421 TEWLPPAHLDHGQPRTNSYFHPEKLL 446 T+W+PP HLDHGQPRTN++ HPEK+L Sbjct 420 TDWIPPPHLDHGQPRTNTFHHPEKIL 445 >gi|342861192|ref|ZP_08717841.1| hypothetical protein MCOL_20012 [Mycobacterium colombiense CECT 3035] gi|342131636|gb|EGT84906.1| hypothetical protein MCOL_20012 [Mycobacterium colombiense CECT 3035] Length=453 Score = 536 bits (1382), Expect = 2e-150, Method: Compositional matrix adjust. Identities = 298/450 (67%), Positives = 343/450 (77%), Gaps = 0/450 (0%) Query 4 SSREEAVAAFDNLDTALNRVLKVSPDDLTIPECLAMLQRCEKIRRRLPAAEHPFINKLAD 63 S +++ FD LD A +R+ + D L + LA+LQRCE+ RRRLPA EHP IN LA Sbjct 2 SDQQDVDEVFDALDAAWDRLCALKLDALNPRQQLAVLQRCEQQRRRLPAVEHPLINSLAR 61 Query 64 QTDQTELGGKLPFALAERLHISRGEASRRIHEAADLGPRRTLTGQPLPPLLTATAAAQRA 123 Q+ ELGG + A+ E ISR EASRRI EA DLGPR LTG+PLPPLL ATAAAQRA Sbjct 62 QSPSEELGGTVVHAITEATLISRAEASRRIKEARDLGPRHGLTGEPLPPLLAATAAAQRA 121 Query 124 GHLGPAHVQVIRCFLHQLPHHVDLPTREKAEAELATLGGRFRPDQLHKLATKLADCLNPD 183 G LG V VIR F HQLP +D+PTRE+ EA LA G RFRP+QL LA+ +ADCLNPD Sbjct 122 GTLGSGQVSVIRKFFHQLPGWIDMPTREQVEARLAKEGSRFRPEQLAALASTVADCLNPD 181 Query 184 GNYNDTDRARRRSIILGNQGPDGMSAISGYLTPEARATVDAVLAKLAAPGMANPADDTPC 243 G + D DRAR R + LGNQ DGMSA+ G+LTPEARAT++AVLAKLAAPGM NP D+TPC Sbjct 182 GTFTDEDRARGRGLTLGNQQADGMSALRGWLTPEARATLEAVLAKLAAPGMCNPFDETPC 241 Query 244 LAGTPSQAAIEADTRSAGQRHHDGLLAALRALLCSGELGQHNGLPAAIIVSTSLTELQSR 303 + G P++ AIE D RSA QR+HD L AALRALL SGELGQHNGLPA+I+V+T+L EL+S Sbjct 242 VDGAPTEEAIERDPRSAAQRNHDALNAALRALLASGELGQHNGLPASIVVTTTLQELESA 301 Query 304 AGHALTGGGTLLPMSDVIRLASHANHYLRIFDHGRELALYHTKRLASPGQRIVLYAKDRG 363 AG LTGGGTLLPMSDVIRLA HA HYL IFD G+ LALYHTKRLASPGQRIVLYAKDRG Sbjct 302 AGRGLTGGGTLLPMSDVIRLARHARHYLAIFDKGKALALYHTKRLASPGQRIVLYAKDRG 361 Query 364 CSFPNCDVPGYLTEVHHVTDFAQCQETDINELTQGCGPHHQLATTGGWITRKRKDGTTEW 423 CS P C VPGY +EVHHVTD+A C TD+N+LT CGPHH+L GGW TRK G TEW Sbjct 362 CSNPGCTVPGYYSEVHHVTDWATCHTTDVNDLTFACGPHHRLLRPGGWTTRKNTRGDTEW 421 Query 424 LPPAHLDHGQPRTNSYFHPEKLLHDSDEDD 453 PP HLD GQPRTN++ HPEKLL D D+D+ Sbjct 422 KPPPHLDRGQPRTNTFHHPEKLLRDGDDDE 451 >gi|342861564|ref|ZP_08718211.1| hypothetical protein MCOL_21866 [Mycobacterium colombiense CECT 3035] gi|342131053|gb|EGT84342.1| hypothetical protein MCOL_21866 [Mycobacterium colombiense CECT 3035] Length=452 Score = 536 bits (1381), Expect = 3e-150, Method: Compositional matrix adjust. Identities = 292/442 (67%), Positives = 337/442 (77%), Gaps = 0/442 (0%) Query 12 AFDNLDTALNRVLKVSPDDLTIPECLAMLQRCEKIRRRLPAAEHPFINKLADQTDQTELG 71 FD LD A R+ +S D L + LA+LQRCE+ RRRLPA EHP IN LA Q+ ELG Sbjct 10 VFDALDAAWGRLCALSLDALNPRQQLAVLQRCEQQRRRLPAVEHPLINSLAGQSPSEELG 69 Query 72 GKLPFALAERLHISRGEASRRIHEAADLGPRRTLTGQPLPPLLTATAAAQRAGHLGPAHV 131 G + A+ E ISR EASRRI+EA DLGPR LTG+PLPPLL ATAAAQRAG LG V Sbjct 70 GTVVHAITEATLISRAEASRRINEARDLGPRHGLTGEPLPPLLAATAAAQRAGALGSGQV 129 Query 132 QVIRCFLHQLPHHVDLPTREKAEAELATLGGRFRPDQLHKLATKLADCLNPDGNYNDTDR 191 VIR F HQLP +D+PTRE+AEA LA G RF P+QL +LA + + LNPDG + D DR Sbjct 130 AVIRKFFHQLPGWIDMPTREQAEARLAKEGSRFGPEQLTELARAMTNALNPDGTFTDEDR 189 Query 192 ARRRSIILGNQGPDGMSAISGYLTPEARATVDAVLAKLAAPGMANPADDTPCLAGTPSQA 251 AR R + LGNQ DGMSA+ G +TPE RAT++AVLAKLAAPGM NP D+TPC+ G P++ Sbjct 190 ARARGLTLGNQQADGMSALRGLITPELRATLEAVLAKLAAPGMCNPFDETPCVDGAPTEE 249 Query 252 AIEADTRSAGQRHHDGLLAALRALLCSGELGQHNGLPAAIIVSTSLTELQSRAGHALTGG 311 AIE D RSA QR+HDGL AALRALL SGELGQHNGLPA+I+V+T+L EL+S AG LTGG Sbjct 250 AIERDPRSAAQRNHDGLNAALRALLASGELGQHNGLPASIVVTTTLQELESAAGRGLTGG 309 Query 312 GTLLPMSDVIRLASHANHYLRIFDHGRELALYHTKRLASPGQRIVLYAKDRGCSFPNCDV 371 GT+LPMSDVIRLA HA HYL IFD G+ LALYHTKRLASPGQRIVLYAKDRGCS P C V Sbjct 310 GTILPMSDVIRLARHARHYLAIFDKGKALALYHTKRLASPGQRIVLYAKDRGCSNPGCTV 369 Query 372 PGYLTEVHHVTDFAQCQETDINELTQGCGPHHQLATTGGWITRKRKDGTTEWLPPAHLDH 431 PGY +EVHHVTD+A C TD+N+LT CGPHH+L GGW TRK G TEW PP HLD Sbjct 370 PGYYSEVHHVTDWATCHTTDVNDLTFACGPHHRLLRPGGWTTRKNTRGDTEWKPPPHLDR 429 Query 432 GQPRTNSYFHPEKLLHDSDEDD 453 GQPRTN++ HPEKLL + D+D+ Sbjct 430 GQPRTNTFHHPEKLLREDDDDE 451 >gi|342861726|ref|ZP_08718372.1| hypothetical protein MCOL_22671 [Mycobacterium colombiense CECT 3035] gi|342130860|gb|EGT84156.1| hypothetical protein MCOL_22671 [Mycobacterium colombiense CECT 3035] Length=453 Score = 536 bits (1380), Expect = 3e-150, Method: Compositional matrix adjust. Identities = 287/454 (64%), Positives = 334/454 (74%), Gaps = 1/454 (0%) Query 1 MYSSSREEAVAAFDNLDTALNRVLKVSPDDLTIPECLAMLQRCEKIRRRLPAAEHPFINK 60 M S REE D L T ++R S LT PE L +L+ E+ RRL H IN+ Sbjct 1 MRSIDREELQGDVDVLRTVVSRFCARSYATLTNPERLQLLEIFERETRRLQTPGHELINQ 60 Query 61 LADQTDQTELGGKLPFALAERLHISRGEASRRIHEAADLGPRRTLTGQPLPPLLTATAAA 120 +A+Q D TELGGKL +ALA+RLHISR EA RRI EAAD+GPRR LTGQPL P+L ATAAA Sbjct 61 IAEQADPTELGGKLSWALADRLHISRAEAGRRIAEAADVGPRRALTGQPLAPVLPATAAA 120 Query 121 QRAGHLGPAHVQVIRCFLHQLPHHVDLPTREKAEAELATLGGRFRPDQLHKLATKLADCL 180 QR G +G HV VIR F HQLP VDL T AE LA FRP+ KLA +L DCL Sbjct 121 QRDGAIGADHVAVIRRFFHQLPESVDLETCVHAEKHLAAKATEFRPEHFAKLARRLMDCL 180 Query 181 NPDGNYNDTDRARRRSIILGNQGPDGMSAISGYLTPEARATVDAVLAKLAAPGMANPADD 240 NPDG+Y D DRAR R ++LG Q DGMS +SG+LTPEARA+ +AVLAKLAAPGMANP D+ Sbjct 181 NPDGSYTDADRARMRGLVLGQQQADGMSRLSGWLTPEARASWEAVLAKLAAPGMANPDDE 240 Query 241 TPCLAGTPSQAAIEADTRSAGQRHHDGLLAALRALLCSGELGQHNGLPAAIIVSTSLTEL 300 P L G PSQ A++ DTRSAGQR+HDGL AALRA+L SG LGQHNGLPA+IIV+T+L +L Sbjct 241 QPVLDGAPSQDAVQRDTRSAGQRNHDGLNAALRAVLASGNLGQHNGLPASIIVTTTLEDL 300 Query 301 QSRAGHALTGGGTLLPMSDVIRLASHANHYLRIFDHGRELALYHTKRLASPGQRIVLYAK 360 + GH LTGGGTLLPMSDVIRLA HA+HYL IFDHG+ LALYH KRLA+PGQRIVLYAK Sbjct 301 ERTTGHGLTGGGTLLPMSDVIRLARHAHHYLAIFDHGKALALYHAKRLAAPGQRIVLYAK 360 Query 361 DRGCSFPNCDVPGYLTEVHHVTDFAQCQETDINELTQGCGPHHQLATTGGWITRKRKDGT 420 DRGC+ P CDV GY EVHHV D+A TDI++LT CGPHH+L GW TR+R +G Sbjct 361 DRGCTAPGCDVAGYYCEVHHVQDWAHTHRTDIDQLTLACGPHHRLLDK-GWTTRQRANGD 419 Query 421 TEWLPPAHLDHGQPRTNSYFHPEKLLHDSDEDDP 454 TEW+PP HLD GQ RTN++ HPEK+L D+D P Sbjct 420 TEWIPPPHLDRGQRRTNTFHHPEKVLAGEDDDGP 453 >gi|41407563|ref|NP_960399.1| hypothetical protein MAP1465c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395916|gb|AAS03782.1| hypothetical protein MAP_1465c [Mycobacterium avium subsp. paratuberculosis K-10] Length=484 Score = 535 bits (1378), Expect = 6e-150, Method: Compositional matrix adjust. Identities = 295/457 (65%), Positives = 342/457 (75%), Gaps = 11/457 (2%) Query 1 MYSSSREEAVAAFDNLDTALNRVLKVSPDDLTIPECLAMLQRCEKIRRRLPAAEHPFINK 60 M SSREE V FD LD A++R+ ++S D LT ECL++LQRCE +RRRLP EHP IN Sbjct 1 MGCSSREEIVKVFDALDAAVDRLGELSFDALTPRECLSLLQRCETVRRRLPVPEHPLINA 60 Query 61 LADQTDQTELGGKLPFALAERLHISRGEASRRIHEAADLGPRRTLTGQPLPPLLTATAAA 120 LA ELGG+L A+AE ISR EA+RR+H AADLGPR LTG+PLPPLL ATAAA Sbjct 61 LARDASPAELGGRLSHAIAEATLISRAEAARRVHTAADLGPRVGLTGEPLPPLLAATAAA 120 Query 121 QRAGHLGPAHVQVIRCFLHQLPHHVDLPTREKAEAELATLGGRFRPDQLHKLATKLADCL 180 QRAG LG V VIR F HQLP +D TRE+AE +LA GG++RP+QL LA LADCL Sbjct 121 QRAGLLGLEQVAVIRKFCHQLPGWIDQATRERAETDLANQGGQYRPEQLAALAGTLADCL 180 Query 181 NPDGNYNDTDRARRRSIILGNQGPDGMSAISGYLTPEARATVDAVLAKLAAPGMANPADD 240 NPDG Y D DRARRRS+ LGNQ DGMS + G+L+PE RAT++AVLAKLAAPGM N D+ Sbjct 181 NPDGLYRDEDRARRRSLTLGNQQADGMSELRGWLSPELRATLEAVLAKLAAPGMCNSLDE 240 Query 241 TPCLAGTPSQAAIEADTRSAGQRHHDGLLAALRALLCSGELGQHNGLPAAIIVSTSLTEL 300 +PC+ GTPSQ AI+ D RSA QR+HDGLLA LRALL SG LGQHNGLPA+IIV+T+L +L Sbjct 241 SPCVEGTPSQHAIDGDARSAAQRNHDGLLAGLRALLASGNLGQHNGLPASIIVTTTLADL 300 Query 301 QSRAGHALTGGGTLLPMSDVIRLASHANHYLRIFDHGRELA-LYHTKRLASPGQRIVLYA 359 ++ AG LTGGGTLLPMSDVIRL+ HA+HYL IFD G+ LA LYHTKRLASP QRIVLYA Sbjct 301 ETAAGRRLTGGGTLLPMSDVIRLSRHAHHYLAIFDQGKALALLYHTKRLASPAQRIVLYA 360 Query 360 KDR----------GCSFPNCDVPGYLTEVHHVTDFAQCQETDINELTQGCGPHHQLATTG 409 KDR GC+ P C VPGY +EVHH TD+A C TDIN+LT CGPHH+L G Sbjct 361 KDRGCTAPGCTAPGCTAPGCTVPGYYSEVHHCTDYATCHTTDINDLTFACGPHHRLLQPG 420 Query 410 GWITRKRKDGTTEWLPPAHLDHGQPRTNSYFHPEKLL 446 W T K G TEW+PP HLD QPRTN++ HPEKLL Sbjct 421 AWTTHKNAKGETEWIPPPHLDRNQPRTNTFHHPEKLL 457 >gi|240170495|ref|ZP_04749154.1| hypothetical protein MkanA1_14375 [Mycobacterium kansasii ATCC 12478] Length=616 Score = 532 bits (1370), Expect = 6e-149, Method: Compositional matrix adjust. Identities = 268/412 (66%), Positives = 318/412 (78%), Gaps = 1/412 (0%) Query 4 SSREEAVAAFDNLDTALNRVLKVSPDDLTIPECLAMLQRCEKIRRRLPAAEHPFINKLAD 63 S +E VA+FD L A++R+ ++S D LT PE +A+L+RCE +RR+LP+ EH IN++A+ Sbjct 3 SGQESVVASFDALQLAVSRLQELSFDALTTPERMALLERCEIVRRQLPSIEHALINQIAE 62 Query 64 QTDQTELGGKLPFALAERLHISRGEASRRIHEAADLGPRRTLTGQPLPPLLTATAAAQRA 123 Q+ + +LGG+LP ALA RL I+R EASRR+ EAA+LG RR +TG+PL P L+ATAAAQRA Sbjct 63 QSSEEQLGGRLPSALASRLRITRAEASRRVGEAAELGERRAMTGEPLAPQLSATAAAQRA 122 Query 124 GHLGPAHVQVIRCFLHQLPHHVDLPTREKAEAELATLGGRFRPDQLHKLATKLADCLNPD 183 GHLG AHV+VIR F+ LP VD+ T EKAEA LA L RFRPDQL KLA +L DCLNPD Sbjct 123 GHLGEAHVRVIRDFVRHLPVEVDIETLEKAEAHLARLATRFRPDQLAKLAQRLMDCLNPD 182 Query 184 GNYNDTDRARRRSIILGNQGPDGMSAISGYLTPEARATVDAVLAKLAAPGMANPADDTPC 243 G + D DRARRR + LG QG DGMS ++G+LTPEARA +DAVLAKLAAPGM NP D++P Sbjct 183 GTFTDEDRARRRGLTLGKQGLDGMSRLTGWLTPEARAGLDAVLAKLAAPGMCNPQDESPV 242 Query 244 LAGTPSQAAIEADTRSAGQRHHDGLLAALRALLCSGELGQHNGLPAAIIVSTSLTELQSR 303 + G P Q + DTRS QR HDGL AALR LL SG LGQHNGLPA+IIVST+L EL+S Sbjct 243 VDGPPPQDVAQRDTRSESQRTHDGLNAALRGLLASGNLGQHNGLPASIIVSTTLKELESA 302 Query 304 AGHALTGGGTLLPMSDVIRLASHANHYLRIFDHGRELALYHTKRLASPGQRIVLYAKDRG 363 +G ALTGGGTLLPMSDVIRL HANHYL IFD G+ LALYHTKRLASPGQRIVLY KDRG Sbjct 303 SGKALTGGGTLLPMSDVIRLGRHANHYLAIFDDGKALALYHTKRLASPGQRIVLYTKDRG 362 Query 364 CSFPNCDVPGYLTEVHHVTDFAQCQETDINELTQGCGPHHQLATTGGWITRK 415 CS P CDVPGY EVHHV ++A TDI++LT CGPHH+L GW K Sbjct 363 CSAPGCDVPGYRCEVHHVREWASTHRTDIDDLTFACGPHHKLLDK-GWSPEK 413 >gi|340628437|ref|YP_004746889.1| hypothetical protein MCAN_34831 [Mycobacterium canettii CIPT 140010059] gi|340006627|emb|CCC45814.1| putative uncharacterized protein [Mycobacterium canettii CIPT 140010059] Length=453 Score = 531 bits (1367), Expect = 1e-148, Method: Compositional matrix adjust. Identities = 275/454 (61%), Positives = 339/454 (75%), Gaps = 2/454 (0%) Query 1 MYSSSREEAVAAFDNLDTALNRVLKVSPDDLTIPECLAMLQRCEKIRRRLPAAEHPFINK 60 M S SRE V FD LD L+R+ +VS D L+ PE LAML+R E + RRLPA H IN+ Sbjct 1 MGSDSRERIVEVFDALDAELDRLGEVSFDVLSTPERLAMLERLEGLVRRLPAVGHALINQ 60 Query 61 LADQTDQTELGGKLPFALAERLHISRGEASRRIHEAADLGPRRTLTGQPLPPLLTATAAA 120 L Q + ELGG L ALA RL I++ +A+RRI +AADLGPRR LTG+PL P LTATA A Sbjct 61 LDAQASEEELGGTLCCALANRLRITKPDAARRIADAADLGPRRALTGEPLAPQLTATATA 120 Query 121 QRAGHLGPAHVQVIRCFLHQLPHHVDLPTREKAEAELATLGGRFRPDQLHKLATKLADCL 180 QR G +G H++VIR F LP VD+ TRE A+A+LA ++RPD+L + A ++ D L Sbjct 121 QRQGLIGEGHIKVIRSFFAHLPAEVDVSTREAADADLAGKAAQYRPDELARYARRVMDWL 180 Query 181 NPDGNYNDTDRARRRSIILGNQGPDGMSAISGYLTPEARATVDAVLAKLAAPGMANPADD 240 +PDG++ DT+RAR+R I LGNQ DGMS +SGYLTPEARAT +AVLAKLAAPG NP DD Sbjct 181 HPDGDFTDTERARKRGITLGNQQYDGMSRLSGYLTPEARATFEAVLAKLAAPGACNPEDD 240 Query 241 TPCLAGTPSQAAIEADTRSAGQRHHDGLLAALRALLCSGELGQHNGLPAAIIVSTSLTEL 300 P + P Q A+ DTRS QR+HDGLLA LRAL+ SG+LGQHNGLP +I+V+T+LT+L Sbjct 241 IPVIDAEPDQDAVGRDTRSQAQRNHDGLLAGLRALIASGKLGQHNGLPVSIVVTTTLTDL 300 Query 301 QSRAGHALTGGGTLLPMSDVIRLASHANHYLRIFDHGRELALYHTKRLASPGQRIVLYAK 360 Q+ AG TGGG+LLPM+DVIR+ASHA+HYL IFDHG+ LALYHTKRLASP QRI+L+A+ Sbjct 301 QNAAGKGFTGGGSLLPMADVIRMASHAHHYLAIFDHGKPLALYHTKRLASPAQRIMLFAR 360 Query 361 DRGCSFPNCDVPGYLTEVHHVTDFAQCQETDINELTQGCGPHHQLATTGGWITRKRKDGT 420 DRGC+ P CD P Y ++ HHV +A + TDI +LT CGP ++LA GWITRK G Sbjct 361 DRGCTKPGCDAPAYHSQAHHVQGWASTRRTDITDLTLACGPDNRLAEK-GWITRKNTHGD 419 Query 421 TEWLPPAHLDHGQPRTNSYFHPEKLLHDSDEDDP 454 TEWLPPAHLDHGQPR N++ HPEKLL D D+D+P Sbjct 420 TEWLPPAHLDHGQPRINTFHHPEKLLRD-DDDEP 452 >gi|118464750|ref|YP_883326.1| hypothetical protein MAV_4180 [Mycobacterium avium 104] gi|118166037|gb|ABK66934.1| conserved hypothetical protein [Mycobacterium avium 104] Length=462 Score = 530 bits (1365), Expect = 2e-148, Method: Compositional matrix adjust. Identities = 296/444 (67%), Positives = 337/444 (76%), Gaps = 0/444 (0%) Query 3 SSSREEAVAAFDNLDTALNRVLKVSPDDLTIPECLAMLQRCEKIRRRLPAAEHPFINKLA 62 SS RE AAFD +D AL+ +L L E LA+L RCEK+RRRLPA EHP IN LA Sbjct 2 SSDREAVSAAFDVIDAALDDLLDCDYAVLATREKLALLNRCEKLRRRLPAVEHPLINALA 61 Query 63 DQTDQTELGGKLPFALAERLHISRGEASRRIHEAADLGPRRTLTGQPLPPLLTATAAAQR 122 ELGG+L A+AE ISR EA+RR+H AADLGPR LTG+PLPP+L ATAAAQR Sbjct 62 RDASPAELGGRLSHAIAEATLISRAEAARRVHTAADLGPRVGLTGEPLPPVLAATAAAQR 121 Query 123 AGHLGPAHVQVIRCFLHQLPHHVDLPTREKAEAELATLGGRFRPDQLHKLATKLADCLNP 182 AG LGP V VIR F HQLP +D TRE+AE +LA G R+RP+QL LA LADCLNP Sbjct 122 AGSLGPEQVAVIRKFCHQLPGWIDQATRERAETDLAREGTRYRPEQLAALAGTLADCLNP 181 Query 183 DGNYNDTDRARRRSIILGNQGPDGMSAISGYLTPEARATVDAVLAKLAAPGMANPADDTP 242 DG Y D DRARRRS+ LGNQ DGMS + G LTPE RAT++AVLAKLAAPGM NP D++P Sbjct 182 DGLYRDEDRARRRSLTLGNQHADGMSELRGLLTPELRATLEAVLAKLAAPGMCNPLDESP 241 Query 243 CLAGTPSQAAIEADTRSAGQRHHDGLLAALRALLCSGELGQHNGLPAAIIVSTSLTELQS 302 C+ GTP++ AIE DTRSA QR+HDGLLA LRALL SG LGQHNGLPA+IIV+T+L +LQ+ Sbjct 242 CVDGTPTEQAIEGDTRSAAQRNHDGLLAGLRALLASGNLGQHNGLPASIIVTTTLADLQA 301 Query 303 RAGHALTGGGTLLPMSDVIRLASHANHYLRIFDHGRELALYHTKRLASPGQRIVLYAKDR 362 AG LTGGGTLLPMSDVIRL+ HA+HYL IFDHG+ LALYHTKRLASP QRIVLYAKDR Sbjct 302 AAGKGLTGGGTLLPMSDVIRLSRHAHHYLAIFDHGKALALYHTKRLASPAQRIVLYAKDR 361 Query 363 GCSFPNCDVPGYLTEVHHVTDFAQCQETDINELTQGCGPHHQLATTGGWITRKRKDGTTE 422 GC+ P C VPGY EVHH TD+A C TDIN+LT CGPHH+L G W T K G T+ Sbjct 362 GCTAPGCTVPGYYAEVHHCTDYATCHTTDINDLTFACGPHHRLLQPGAWTTHKNARGETQ 421 Query 423 WLPPAHLDHGQPRTNSYFHPEKLL 446 WLPP HLD QPRTN++ HPEKLL Sbjct 422 WLPPPHLDRNQPRTNTFHHPEKLL 445 >gi|118617874|ref|YP_906206.1| hypothetical protein MUL_2371 [Mycobacterium ulcerans Agy99] gi|118569984|gb|ABL04735.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99] Length=462 Score = 528 bits (1361), Expect = 6e-148, Method: Compositional matrix adjust. Identities = 279/450 (62%), Positives = 336/450 (75%), Gaps = 1/450 (0%) Query 4 SSREEAVAAFDNLDTALNRVLKVSPDDLTIPECLAMLQRCEKIRRRLPAAEHPFINKLAD 63 S RE VA D LD A++ +++VS + LT PE L +L+R E + RRLPAA++ +N+L + Sbjct 7 SDRESVVATLDRLDRAVDALVEVSFEALTTPERLRVLERLEVVARRLPAAQYALVNQLDE 66 Query 64 QTDQTELGGKLPFALAERLHISRGEASRRIHEAADLGPRRTLTGQPLPPLLTATAAAQRA 123 Q + ELGG+L +A RL I+R EA RR+ EAA++GPRR L+GQP+ P+LTATAAA R Sbjct 67 QPGEAELGGRLAAVVASRLRITRSEAGRRVAEAAEVGPRRALSGQPVGPVLTATAAALRQ 126 Query 124 GHLGPAHVQVIRCFLHQLPHHVDLPTREKAEAELATLGGRFRPDQLHKLATKLADCLNPD 183 G +G HV+VIR F QLP VD+ TR++AEA LA L +FRPDQL +LA +L DCLNPD Sbjct 127 GVVGEGHVRVIRDFFRQLPAGVDVGTRDRAEAHLAKLATQFRPDQLARLAGRLMDCLNPD 186 Query 184 GNYNDTDRARRRSIILGNQGPDGMSAISGYLTPEARATVDAVLAKLAAPGMANPADDTPC 243 G ++D DRARRR + LG QG DGMS ISG+LTPEARA ++AV AKLAAPGM NP D+ Sbjct 187 GRHSDEDRARRRGLSLGRQGLDGMSRISGWLTPEARAGLEAVWAKLAAPGMCNPEDEAAV 246 Query 244 LAGTPSQAAIEADTRSAGQRHHDGLLAALRALLCSGELGQHNGLPAAIIVSTSLTELQSR 303 + G S+ A + D+RS QR HDG AALRA+L SGELGQHNGLPA+IIVST+L EL++ Sbjct 247 VDGPVSRDAADRDSRSVSQRQHDGFNAALRAVLASGELGQHNGLPASIIVSTTLKELEAA 306 Query 304 AGHALTGGGTLLPMSDVIRLASHANHYLRIFDHGRELALYHTKRLASPGQRIVLYAKDRG 363 AG LTGGGTLLPMSDVIRLA HA+HYL +FD G + LYH KRLA+PGQRIVLYAKDRG Sbjct 307 AGRGLTGGGTLLPMSDVIRLARHAHHYLAVFDRGEAIGLYHAKRLATPGQRIVLYAKDRG 366 Query 364 CSFPNCDVPGYLTEVHHVTDFAQCQETDINELTQGCGPHHQLATTGGWITRKRKDGTTEW 423 C+ P CDV GY EVHHV +A TDIN+LT CGP H+L GW TRK G TEW Sbjct 367 CTRPGCDVAGYQCEVHHVAAWAISGRTDINQLTLACGPDHKLLEQ-GWRTRKNAHGDTEW 425 Query 424 LPPAHLDHGQPRTNSYFHPEKLLHDSDEDD 453 LPP HLDHGQPRTNSY HPEKLL DS +DD Sbjct 426 LPPPHLDHGQPRTNSYHHPEKLLRDSADDD 455 >gi|183983120|ref|YP_001851411.1| hypothetical protein MMAR_3121 [Mycobacterium marinum M] gi|183176446|gb|ACC41556.1| conserved hypothetical protein [Mycobacterium marinum M] Length=462 Score = 526 bits (1356), Expect = 2e-147, Method: Compositional matrix adjust. Identities = 278/450 (62%), Positives = 335/450 (75%), Gaps = 1/450 (0%) Query 4 SSREEAVAAFDNLDTALNRVLKVSPDDLTIPECLAMLQRCEKIRRRLPAAEHPFINKLAD 63 S RE VA D LD A++ +++VS + LT PE L +L+R E + RRLP A++ +N+L + Sbjct 7 SDRESVVATLDRLDRAVDALVEVSFEALTTPERLRVLERLEVVARRLPVAQYALLNQLDE 66 Query 64 QTDQTELGGKLPFALAERLHISRGEASRRIHEAADLGPRRTLTGQPLPPLLTATAAAQRA 123 Q + ELGG+L +A RL I+R EA RR+ EAAD+GPRR L+GQP+ P+LTATAAA R Sbjct 67 QAGEAELGGRLAAVVASRLRITRSEAGRRVAEAADVGPRRALSGQPVGPVLTATAAALRQ 126 Query 124 GHLGPAHVQVIRCFLHQLPHHVDLPTREKAEAELATLGGRFRPDQLHKLATKLADCLNPD 183 G +G HV+VIR F +LP VD+ TR++AEA LA L +FRPDQL +LA +L DCLNPD Sbjct 127 GVVGEGHVRVIRDFFRRLPAGVDVGTRDRAEAHLAKLATQFRPDQLARLAGRLMDCLNPD 186 Query 184 GNYNDTDRARRRSIILGNQGPDGMSAISGYLTPEARATVDAVLAKLAAPGMANPADDTPC 243 G ++D DRARRR + LG QG DGMS ISG+LTPEARA ++AV AKLAAPGM NP D+ Sbjct 187 GRHSDEDRARRRGLSLGRQGLDGMSRISGWLTPEARAGLEAVWAKLAAPGMCNPEDEAAV 246 Query 244 LAGTPSQAAIEADTRSAGQRHHDGLLAALRALLCSGELGQHNGLPAAIIVSTSLTELQSR 303 + G S A + D+RS GQR HDG AALRA+L SGELGQHNGLPA+IIVST+L EL++ Sbjct 247 VDGPVSPDAADRDSRSVGQRQHDGFNAALRAVLASGELGQHNGLPASIIVSTTLKELEAA 306 Query 304 AGHALTGGGTLLPMSDVIRLASHANHYLRIFDHGRELALYHTKRLASPGQRIVLYAKDRG 363 AG LTGGGTLLPMSDVIRLA HA+HYL +FD G + LYH KRLA+PGQRIVLYAKDRG Sbjct 307 AGRGLTGGGTLLPMSDVIRLARHAHHYLAVFDRGEAIGLYHAKRLATPGQRIVLYAKDRG 366 Query 364 CSFPNCDVPGYLTEVHHVTDFAQCQETDINELTQGCGPHHQLATTGGWITRKRKDGTTEW 423 C+ P CDV GY EVHHV +A TDIN+LT CGP H+L GW TRK G TEW Sbjct 367 CTRPGCDVAGYQCEVHHVAAWAISGRTDINQLTLACGPDHKLLEQ-GWRTRKNAHGDTEW 425 Query 424 LPPAHLDHGQPRTNSYFHPEKLLHDSDEDD 453 LPP HLDHGQPRTN+Y HPEKLL DS +DD Sbjct 426 LPPPHLDHGQPRTNTYHHPEKLLRDSADDD 455 >gi|340628249|ref|YP_004746701.1| hypothetical protein MCAN_32901 [Mycobacterium canettii CIPT 140010059] gi|340006439|emb|CCC45621.1| putative uncharacterized protein [Mycobacterium canettii CIPT 140010059] Length=453 Score = 525 bits (1351), Expect = 8e-147, Method: Compositional matrix adjust. Identities = 283/454 (63%), Positives = 345/454 (76%), Gaps = 2/454 (0%) Query 1 MYSSSREEAVAAFDNLDTALNRVLKVSPDDLTIPECLAMLQRCEKIRRRLPAAEHPFINK 60 M ++SREE V AFD LD L+R+ +VS + LT PE LAML+R E + RRLPA H IN+ Sbjct 1 MLANSREELVEAFDALDAELDRLDEVSFEVLTSPERLAMLERLEGLVRRLPAVGHALINQ 60 Query 61 LADQTDQTELGGKLPFALAERLHISRGEASRRIHEAADLGPRRTLTGQPLPPLLTATAAA 120 L Q + ELGG L ALA RL I++ EA+RRI +AADLGPRR LTG+PL P LTATA A Sbjct 61 LDAQASEEELGGTLCCALANRLRITKPEAARRIADAADLGPRRALTGEPLAPQLTATATA 120 Query 121 QRAGHLGPAHVQVIRCFLHQLPHHVDLPTREKAEAELATLGGRFRPDQLHKLATKLADCL 180 QR G +G AH++VIR F LP VD+ TRE AEA+LA ++RPD+L + A ++ D L Sbjct 121 QRQGLIGEAHIKVIRSFFAHLPAEVDVSTREAAEADLAGKAAQYRPDELARYARRVMDWL 180 Query 181 NPDGNYNDTDRARRRSIILGNQGPDGMSAISGYLTPEARATVDAVLAKLAAPGMANPADD 240 +PDG++ DT+RAR+R I LGNQ DGMS +SGYLTPE RAT +AVLAKLAAPGM NP D Sbjct 181 HPDGDFTDTERARKRGITLGNQEYDGMSRLSGYLTPETRATFEAVLAKLAAPGMCNPDDH 240 Query 241 TPCLAGTPSQAAIEADTRSAGQRHHDGLLAALRALLCSGELGQHNGLPAAIIVSTSLTEL 300 TP + TP AAI+ DTRS QR+HDGLLA LRAL+ SG+LGQHNGLP +I+V+T+LT+L Sbjct 241 TPVIDTTPDAAAIDRDTRSQAQRNHDGLLAGLRALIASGKLGQHNGLPVSIVVTTTLTDL 300 Query 301 QSRAGHALTGGGTLLPMSDVIRLASHANHYLRIFDHGRELALYHTKRLASPGQRIVLYAK 360 Q+ AG TGGGTLLPM+DVIR+ASHA+HYL IFDHG LALYHTKRLASP QRI+L+A+ Sbjct 301 QTGAGKGFTGGGTLLPMADVIRMASHAHHYLAIFDHGTPLALYHTKRLASPAQRIMLFAR 360 Query 361 DRGCSFPNCDVPGYLTEVHHVTDFAQCQETDINELTQGCGPHHQLATTGGWITRKRKDGT 420 DRGC+ P CD P Y ++ HHV +A + TDI +LT CGP ++LA GWITRK G Sbjct 361 DRGCTKPGCDAPAYHSQAHHVQGWASTRRTDITDLTLACGPDNRLAEK-GWITRKNTHGH 419 Query 421 TEWLPPAHLDHGQPRTNSYFHPEKLLHDSDEDDP 454 TEWLPP HLDHGQPRTN++ HPEKLLHD D+D+P Sbjct 420 TEWLPPPHLDHGQPRTNTFHHPEKLLHD-DDDEP 452 >gi|118464603|ref|YP_881555.1| hypothetical protein MAV_2352 [Mycobacterium avium 104] gi|254775024|ref|ZP_05216540.1| hypothetical protein MaviaA2_10169 [Mycobacterium avium subsp. avium ATCC 25291] gi|48928140|gb|AAT47748.1| conserved hypothetical protein [Mycobacterium avium] gi|118165890|gb|ABK66787.1| conserved hypothetical protein [Mycobacterium avium 104] Length=468 Score = 524 bits (1350), Expect = 1e-146, Method: Compositional matrix adjust. Identities = 292/446 (66%), Positives = 342/446 (77%), Gaps = 1/446 (0%) Query 1 MYSSSREEAVAAFDNLDTALNRVLKVSPDDLTIPECLAMLQRCEKIRRRLPAAEHPFINK 60 M+SS+REE A D L A++RVL S D LT PE L +L+ ++ RRL H IN+ Sbjct 1 MHSSTREEIRADVDALRAAVSRVLGHSYDALTTPERLRLLEIFDRETRRLRVPGHQLINQ 60 Query 61 LADQTDQTELGGKLPFALAERLHISRGEASRRIHEAADLGPRRTLTGQPLPPLLTATAAA 120 LA+Q+D TELGG+L FALAERLHI+R +ASRRI EAADLGPRR LTG+PLPPLL ATAAA Sbjct 61 LAEQSDPTELGGRLSFALAERLHITRSDASRRIAEAADLGPRRALTGEPLPPLLPATAAA 120 Query 121 QRAGHLGPAHVQVIRCFLHQLPHHVDLPTREKAEAELATLGGRFRPDQLHKLATKLADCL 180 QR G +G HV VIR F QLP VD+ T E AE +LA +FRPDQL KLA +L DCL Sbjct 121 QRDGAIGTDHVAVIRQFFDQLPEAVDVETCEHAERQLAAQATQFRPDQLSKLARRLMDCL 180 Query 181 NPDGNYNDTDRARRRSIILGNQGPDGMSAISGYLTPEARATVDAVLAKLAAPGMANPADD 240 NPDG Y+D DRAR R ++LGNQ DGMS +SG+LTPEARA +AVLAKLAAPGM NP DD Sbjct 181 NPDGRYSDEDRARARGLVLGNQQADGMSRLSGWLTPEARAGWEAVLAKLAAPGMCNPDDD 240 Query 241 TPCLAGTPSQAAIEADTRSAGQRHHDGLLAALRALLCSGELGQHNGLPAAIIVSTSLTEL 300 P + G P +AA + D+RSA QR+HDGL AALRALL G+LGQHNGLPA+IIV+T+L +L Sbjct 241 APVVDGPPPEAASQRDSRSAAQRNHDGLNAALRALLAGGKLGQHNGLPASIIVTTTLRDL 300 Query 301 QSRAGHALTGGGTLLPMSDVIRLASHANHYLRIFDHGRELALYHTKRLASPGQRIVLYAK 360 +S AG LTGGGTLLPMS+VIRLA HA+HYL +FD+G+ LALYHTKRLASPGQRIVLYAK Sbjct 301 ESAAGKGLTGGGTLLPMSEVIRLARHAHHYLAVFDNGKPLALYHTKRLASPGQRIVLYAK 360 Query 361 DRGCSFPNCDVPGYLTEVHHVTDFAQCQETDINELTQGCGPHHQLATTGGWITRKRKDGT 420 DRGCS P CDV GY EVHHVT +A+C TDI++LT CG HH LA GWITRK G Sbjct 361 DRGCSHPGCDVSGYYCEVHHVTGYAKCGRTDIDQLTFACGGHHPLAEQ-GWITRKNGRGE 419 Query 421 TEWLPPAHLDHGQPRTNSYFHPEKLL 446 TEW+PP HL+ GQPR NS+ HPE +L Sbjct 420 TEWIPPPHLERGQPRVNSFHHPEDML 445 >gi|240172437|ref|ZP_04751096.1| hypothetical protein MkanA1_24195 [Mycobacterium kansasii ATCC 12478] Length=454 Score = 521 bits (1341), Expect = 1e-145, Method: Compositional matrix adjust. Identities = 273/454 (61%), Positives = 332/454 (74%), Gaps = 1/454 (0%) Query 1 MYSSSREEAVAAFDNLDTALNRVLKVSPDDLTIPECLAMLQRCEKIRRRLPAAEHPFINK 60 M S REE V FD LD L+R+ ++S + LTIPE L L+R E++ RRL A +H IN+ Sbjct 1 MGSGGREEIVEVFDALDAELDRLCELSFEVLTIPERLRALERLERVARRLRAPQHALINQ 60 Query 61 LADQTDQTELGGKLPFALAERLHISRGEASRRIHEAADLGPRRTLTGQPLPPLLTATAAA 120 L Q + ELG KL ALA+RL I++ EA RRI EAADLGPRR LTG+PL P L+ATAAA Sbjct 61 LGAQAGEAELGAKLRSALADRLRITKAEAGRRIDEAADLGPRRALTGEPLAPQLSATAAA 120 Query 121 QRAGHLGPAHVQVIRCFLHQLPHHVDLPTREKAEAELATLGGRFRPDQLHKLATKLADCL 180 QR G +G HV+VIR FL LP VDLPTRE A+A+LA +R D+L K A ++ D L Sbjct 121 QRDGLIGDGHVRVIRGFLAHLPAEVDLPTREAADADLARKASSYRRDELAKYAQRIMDWL 180 Query 181 NPDGNYNDTDRARRRSIILGNQGPDGMSAISGYLTPEARATVDAVLAKLAAPGMANPADD 240 NPDG + +RAR+R I +G Q DGMS ISGYLTPEARATV+ VLAKLAAPG NP D Sbjct 181 NPDGELREQERARKRGITIGRQEYDGMSRISGYLTPEARATVEPVLAKLAAPGACNPDDQ 240 Query 241 TPCLAGTPSQAAIEADTRSAGQRHHDGLLAALRALLCSGELGQHNGLPAAIIVSTSLTEL 300 TP + TP A++ DTRS QR+HDGLLA LR LLCSG+LG+HNGLP +I+V+T+L +L Sbjct 241 TPVIDTTPDADAVDRDTRSQAQRNHDGLLAGLRGLLCSGDLGRHNGLPVSIVVTTTLKDL 300 Query 301 QSRAGHALTGGGTLLPMSDVIRLASHANHYLRIFDHGRELALYHTKRLASPGQRIVLYAK 360 Q+ AG A TGGG+LLPMSD+IRLASHANHYL +FDHG+ LALYH+KRLA P QRI+L+AK Sbjct 301 QAAAGKAHTGGGSLLPMSDLIRLASHANHYLALFDHGKALALYHSKRLACPAQRIMLFAK 360 Query 361 DRGCSFPNCDVPGYLTEVHHVTDFAQCQETDINELTQGCGPHHQLATTGGWITRKRKDGT 420 DRGC+ P CD P Y ++VHHV +A TDIN+LT CG ++LA GW TRK G Sbjct 361 DRGCTKPGCDAPAYHSQVHHVRGWAATGRTDINDLTLACGIDNRLAEK-GWRTRKNARGD 419 Query 421 TEWLPPAHLDHGQPRTNSYFHPEKLLHDSDEDDP 454 TEW+PPAHLD GQPRTN Y HPE+ L D D+ +P Sbjct 420 TEWIPPAHLDRGQPRTNPYHHPERFLSDGDDAEP 453 >gi|41407530|ref|NP_960366.1| hypothetical protein MAP1432 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395883|gb|AAS03749.1| hypothetical protein MAP_1432 [Mycobacterium avium subsp. paratuberculosis K-10] Length=496 Score = 520 bits (1339), Expect = 2e-145, Method: Compositional matrix adjust. Identities = 290/455 (64%), Positives = 335/455 (74%), Gaps = 11/455 (2%) Query 3 SSSREEAVAAFDNLDTALNRVLKVSPDDLTIPECLAMLQRCEKIRRRLPAAEHPFINKLA 62 SS R AAFD +D AL+ +L L E LA+L RCE++RRRLPA EHP IN LA Sbjct 22 SSDRGAVSAAFDVIDAALDDLLDCDYVALATREKLALLTRCERLRRRLPAVEHPLINALA 81 Query 63 DQTDQTELGGKLPFALAERLHISRGEASRRIHEAADLGPRRTLTGQPLPPLLTATAAAQR 122 ELGG+L A+AE ISR EA+RR+H AADLGPR LTG+PLPPLL ATAAAQR Sbjct 82 RDASPAELGGRLSHAIAEATLISRAEAARRVHTAADLGPRVGLTGEPLPPLLAATAAAQR 141 Query 123 AGHLGPAHVQVIRCFLHQLPHHVDLPTREKAEAELATLGGRFRPDQLHKLATKLADCLNP 182 AG LG V VIR F HQLP +D TRE+AE +LA GG++RP+QL LA LADCLNP Sbjct 142 AGLLGLEQVAVIRKFCHQLPGWIDQATRERAETDLANQGGQYRPEQLAALAGTLADCLNP 201 Query 183 DGNYNDTDRARRRSIILGNQGPDGMSAISGYLTPEARATVDAVLAKLAAPGMANPADDTP 242 DG Y D DRARRRS+ LGNQ DGMS + G+L+PE RAT++AVLAKLAAPGM N D++P Sbjct 202 DGLYRDEDRARRRSLTLGNQQADGMSELRGWLSPELRATLEAVLAKLAAPGMCNSLDESP 261 Query 243 CLAGTPSQAAIEADTRSAGQRHHDGLLAALRALLCSGELGQHNGLPAAIIVSTSLTELQS 302 C+ GTPSQ AI+ D RSA QR+HDGLLA LRALL SG LGQHNGLPA+IIV+T+L +L++ Sbjct 262 CVEGTPSQHAIDGDARSAAQRNHDGLLAGLRALLASGNLGQHNGLPASIIVTTTLADLET 321 Query 303 RAGHALTGGGTLLPMSDVIRLASHANHYLRIFDHGRELA-LYHTKRLASPGQRIVLYAKD 361 AG LTGGGTLLPMSDVIRL+ HA+HYL IFD G+ LA LYHTKRLASP QRIVLYAKD Sbjct 322 AAGRRLTGGGTLLPMSDVIRLSRHAHHYLAIFDQGKALALLYHTKRLASPAQRIVLYAKD 381 Query 362 R----------GCSFPNCDVPGYLTEVHHVTDFAQCQETDINELTQGCGPHHQLATTGGW 411 R GC+ P C VPGY +EVHH TD+A C TDIN+LT CGPHH+L G W Sbjct 382 RGCTAPGCTAPGCTAPGCTVPGYYSEVHHCTDYATCHTTDINDLTFACGPHHRLLQPGAW 441 Query 412 ITRKRKDGTTEWLPPAHLDHGQPRTNSYFHPEKLL 446 T K G TEW+PP HLD QPRTN++ HPEKLL Sbjct 442 TTHKNAKGETEWIPPPHLDRNQPRTNTFHHPEKLL 476 >gi|118465560|ref|YP_882185.1| hypothetical protein MAV_2999 [Mycobacterium avium 104] gi|118166847|gb|ABK67744.1| conserved hypothetical protein [Mycobacterium avium 104] Length=465 Score = 518 bits (1335), Expect = 6e-145, Method: Compositional matrix adjust. Identities = 294/444 (67%), Positives = 336/444 (76%), Gaps = 0/444 (0%) Query 3 SSSREEAVAAFDNLDTALNRVLKVSPDDLTIPECLAMLQRCEKIRRRLPAAEHPFINKLA 62 SS RE AAFD +D AL+ +L L E LA+L RCE++RRRLPA EHP IN LA Sbjct 5 SSDREAVSAAFDAIDAALDDLLDCDYAALATREKLALLNRCERLRRRLPAIEHPLINALA 64 Query 63 DQTDQTELGGKLPFALAERLHISRGEASRRIHEAADLGPRRTLTGQPLPPLLTATAAAQR 122 ELGG+L A+AE ISR EA+RR+H AADLGPR LTG+PLPPLL ATAAAQR Sbjct 65 RDATPAELGGRLSHAIAEATLISRAEAARRVHTAADLGPRVGLTGEPLPPLLAATAAAQR 124 Query 123 AGHLGPAHVQVIRCFLHQLPHHVDLPTREKAEAELATLGGRFRPDQLHKLATKLADCLNP 182 G LG V VIR F HQLP +D TRE+AEA+LA G R+RP+QL LA LADCLNP Sbjct 125 EGSLGLEQVAVIRKFCHQLPGWIDQATRERAEADLANQGTRYRPEQLAALAGTLADCLNP 184 Query 183 DGNYNDTDRARRRSIILGNQGPDGMSAISGYLTPEARATVDAVLAKLAAPGMANPADDTP 242 DG Y D DRARRRS+ LGNQ DGMS + G LTPE RAT++AVLAKLAAPGM NP D++P Sbjct 185 DGLYRDEDRARRRSLTLGNQHADGMSELRGLLTPELRATLEAVLAKLAAPGMCNPLDESP 244 Query 243 CLAGTPSQAAIEADTRSAGQRHHDGLLAALRALLCSGELGQHNGLPAAIIVSTSLTELQS 302 C+ GTP++ AIE DTRSA QR+HDGLLA LRALL SG LGQHNGLPA+IIV+T+L +L++ Sbjct 245 CVDGTPTEQAIEGDTRSAAQRNHDGLLAGLRALLASGNLGQHNGLPASIIVTTTLADLET 304 Query 303 RAGHALTGGGTLLPMSDVIRLASHANHYLRIFDHGRELALYHTKRLASPGQRIVLYAKDR 362 AG LTGGGTLLPMSDVIRL+ HA+HYL IFD G+ LALYHTKRLASPGQRIVLYAKDR Sbjct 305 AAGKGLTGGGTLLPMSDVIRLSRHAHHYLAIFDKGKALALYHTKRLASPGQRIVLYAKDR 364 Query 363 GCSFPNCDVPGYLTEVHHVTDFAQCQETDINELTQGCGPHHQLATTGGWITRKRKDGTTE 422 GC+ P C VPGY EVHH TD+A C TDIN+LT CGPHH+L G W T K G T+ Sbjct 365 GCTAPGCTVPGYYAEVHHCTDYATCHTTDINDLTFACGPHHRLLQPGAWTTHKNARGETQ 424 Query 423 WLPPAHLDHGQPRTNSYFHPEKLL 446 WLPP HLD QPRTN++ HPEKLL Sbjct 425 WLPPPHLDRNQPRTNTFHHPEKLL 448 >gi|41409430|ref|NP_962266.1| hypothetical protein MAP3332 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398261|gb|AAS05882.1| hypothetical protein MAP_3332 [Mycobacterium avium subsp. paratuberculosis K-10] Length=462 Score = 516 bits (1330), Expect = 2e-144, Method: Compositional matrix adjust. Identities = 293/444 (66%), Positives = 333/444 (75%), Gaps = 0/444 (0%) Query 3 SSSREEAVAAFDNLDTALNRVLKVSPDDLTIPECLAMLQRCEKIRRRLPAAEHPFINKLA 62 SS RE AAFD +D AL+ +L L E LA+L RCEK+RRRLPA EHP IN LA Sbjct 2 SSDREAVSAAFDAIDAALDDLLDCDYVALATREKLALLNRCEKLRRRLPAVEHPLINALA 61 Query 63 DQTDQTELGGKLPFALAERLHISRGEASRRIHEAADLGPRRTLTGQPLPPLLTATAAAQR 122 ELGG+L A+AE ISR EA+RR+H AADLGPR LTG+PLPPLL ATAAAQR Sbjct 62 RDATPAELGGRLSHAIAEATLISRAEAARRVHTAADLGPRVGLTGEPLPPLLAATAAAQR 121 Query 123 AGHLGPAHVQVIRCFLHQLPHHVDLPTREKAEAELATLGGRFRPDQLHKLATKLADCLNP 182 G LG V VIR F HQLP +D TRE+AEA+LA R+RP+QL LA LADCLNP Sbjct 122 EGSLGLEQVAVIRKFCHQLPGWIDQATRERAEADLAREATRYRPEQLAALAGTLADCLNP 181 Query 183 DGNYNDTDRARRRSIILGNQGPDGMSAISGYLTPEARATVDAVLAKLAAPGMANPADDTP 242 DG Y D DRARRRS+ LGNQ DGMS + G LTPE RAT++AVLAKLAAPGM NP D+ P Sbjct 182 DGLYRDEDRARRRSLTLGNQHADGMSELRGLLTPELRATLEAVLAKLAAPGMCNPLDENP 241 Query 243 CLAGTPSQAAIEADTRSAGQRHHDGLLAALRALLCSGELGQHNGLPAAIIVSTSLTELQS 302 C+ GTPSQ AI+ D RSA QR+HDGLLA LRALL SG LGQHNGLPA+IIV+T+L +L++ Sbjct 242 CVEGTPSQHAIDGDARSAAQRNHDGLLAGLRALLASGNLGQHNGLPASIIVTTTLADLET 301 Query 303 RAGHALTGGGTLLPMSDVIRLASHANHYLRIFDHGRELALYHTKRLASPGQRIVLYAKDR 362 AG LTGGGTLLPMSDVIRL+ HA HYL IFD G+ LALYHTKRLASPGQRIVLYAKDR Sbjct 302 AAGRGLTGGGTLLPMSDVIRLSRHARHYLAIFDQGKALALYHTKRLASPGQRIVLYAKDR 361 Query 363 GCSFPNCDVPGYLTEVHHVTDFAQCQETDINELTQGCGPHHQLATTGGWITRKRKDGTTE 422 GC+ P C +PGY +EVHH TD+A C TDIN+LT CGPHH+L G W T K G TE Sbjct 362 GCTAPGCTIPGYYSEVHHCTDYATCHTTDINDLTFACGPHHRLLQPGAWTTHKNAKGETE 421 Query 423 WLPPAHLDHGQPRTNSYFHPEKLL 446 W+PP HLD QPRTN++ HPEKLL Sbjct 422 WIPPPHLDRNQPRTNTFHHPEKLL 445 >gi|118464547|ref|YP_880668.1| hypothetical protein MAV_1426 [Mycobacterium avium 104] gi|118165834|gb|ABK66731.1| conserved hypothetical protein [Mycobacterium avium 104] Length=472 Score = 515 bits (1326), Expect = 7e-144, Method: Compositional matrix adjust. Identities = 285/431 (67%), Positives = 329/431 (77%), Gaps = 0/431 (0%) Query 23 VLKVSPDDLTIPECLAMLQRCEKIRRRLPAAEHPFINKLADQTDQTELGGKLPFALAERL 82 V + D LT ECLA+L RCEK RRRLP AEH IN +A Q ELGG+L A+AE Sbjct 26 VAALGFDGLTPRECLALLGRCEKARRRLPVAEHQLINLVARQASPAELGGRLSHAIAEAT 85 Query 83 HISRGEASRRIHEAADLGPRRTLTGQPLPPLLTATAAAQRAGHLGPAHVQVIRCFLHQLP 142 ISR EA+RR+H AADLGPR LTG+PLPP+L ATAAAQRAG LGP V VIR F HQLP Sbjct 86 LISRAEAARRVHTAADLGPRVGLTGEPLPPVLAATAAAQRAGSLGPEQVAVIRKFCHQLP 145 Query 143 HHVDLPTREKAEAELATLGGRFRPDQLHKLATKLADCLNPDGNYNDTDRARRRSIILGNQ 202 +D TRE+AE +LA G R+RP+QL LA LADCLNPDG Y D DRARRRS+ LGNQ Sbjct 146 GWIDQATRERAETDLAREGTRYRPEQLAALAGTLADCLNPDGLYRDEDRARRRSLTLGNQ 205 Query 203 GPDGMSAISGYLTPEARATVDAVLAKLAAPGMANPADDTPCLAGTPSQAAIEADTRSAGQ 262 DGMS + G+L+PE RAT++AVLAKLAAPGM NP D++PC+ GTP++ AIE DTRSA Q Sbjct 206 HADGMSELRGWLSPELRATLEAVLAKLAAPGMCNPLDESPCVDGTPTEQAIEGDTRSAAQ 265 Query 263 RHHDGLLAALRALLCSGELGQHNGLPAAIIVSTSLTELQSRAGHALTGGGTLLPMSDVIR 322 R+HDGLLA LRALL SG LGQHNGLPA+IIV+T+L +L++ AG LTGGGTLLP+SDVIR Sbjct 266 RNHDGLLAGLRALLASGNLGQHNGLPASIIVTTTLADLETAAGKGLTGGGTLLPISDVIR 325 Query 323 LASHANHYLRIFDHGRELALYHTKRLASPGQRIVLYAKDRGCSFPNCDVPGYLTEVHHVT 382 L+ HA+HYL IFDHG+ LALYHTKRLASP QRIVLYAKDRGC+ P C VPGY EVHH T Sbjct 326 LSRHAHHYLAIFDHGKALALYHTKRLASPAQRIVLYAKDRGCTAPGCTVPGYYAEVHHCT 385 Query 383 DFAQCQETDINELTQGCGPHHQLATTGGWITRKRKDGTTEWLPPAHLDHGQPRTNSYFHP 442 D+A C TDIN+LT CGPHH+L G W T K G T+WLPP HLD QPRTN++ HP Sbjct 386 DYATCHTTDINDLTFACGPHHRLLQPGAWTTHKNAKGETQWLPPPHLDRNQPRTNTFHHP 445 Query 443 EKLLHDSDEDD 453 EKLL +D Sbjct 446 EKLLRGEYGED 456 >gi|15840566|ref|NP_335603.1| hypothetical protein MT1160 [Mycobacterium tuberculosis CDC1551] gi|13880745|gb|AAK45417.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551] gi|323720410|gb|EGB29504.1| hypothetical protein TMMG_01820 [Mycobacterium tuberculosis CDC1551A] Length=420 Score = 513 bits (1321), Expect = 3e-143, Method: Compositional matrix adjust. Identities = 266/419 (64%), Positives = 317/419 (76%), Gaps = 1/419 (0%) Query 4 SSREEAVAAFDNLDTALNRVLKVSPDDLTIPECLAMLQRCEKIRRRLPAAEHPFINKLAD 63 S+REE AF +L TAL+RVL ++ D LT PE LA+L+ CE RR+LP+ EH IN++ + Sbjct 3 STREEITEAFASLATALSRVLGLTFDALTTPERLALLEHCETARRQLPSVEHTLINQIGE 62 Query 64 QTDQTELGGKLPFALAERLHISRGEASRRIHEAADLGPRRTLTGQPLPPLLTATAAAQRA 123 Q+ + ELGGKL LA+RL I+R EA RR+ EAADLG RR LTG+PLPPLLTATA AQR Sbjct 63 QSTEEELGGKLGLTLADRLRITRSEAKRRVAEAADLGQRRALTGEPLPPLLTATAKAQRH 122 Query 124 GHLGPAHVQVIRCFLHQLPHHVDLPTREKAEAELATLGGRFRPDQLHKLATKLADCLNPD 183 G +G HV+VIR F+H+LP VDL T EKAE +LA ++RPDQL KLA ++ DCLNPD Sbjct 123 GLIGDGHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQATQYRPDQLAKLAARIMDCLNPD 182 Query 184 GNYNDTDRARRRSIILGNQGPDGMSAISGYLTPEARATVDAVLAKLAAPGMANPADDTPC 243 G+Y D DRARRR + LG Q DGMS +SGY+TPE RAT++AV AKLAAPGM NP PC Sbjct 183 GDYTDEDRARRRGLTLGKQDVDGMSRLSGYVTPELRATIEAVWAKLAAPGMCNPEQKAPC 242 Query 244 LAGTPSQAAIEADTRSAGQRHHDGLLAALRALLCSGELGQHNGLPAAIIVSTSLTELQSR 303 + G PS+ DTRS QR+HD L A LR+LL SG LGQHNGLPA+IIV+T+L +L++ Sbjct 243 VNGAPSKEQARRDTRSCPQRNHDALNAGLRSLLTSGNLGQHNGLPASIIVTTTLKDLEAA 302 Query 304 AGHALTGGGTLLPMSDVIRLASHANHYLRIFDHGRELALYHTKRLASPGQRIVLYAKDRG 363 AG LTGGGT+LP+SDVIRLA HANHYL IFD G+ LALYHTKRLASP QRI+LYAKD G Sbjct 303 AGAGLTGGGTILPISDVIRLARHANHYLAIFDRGKALALYHTKRLASPAQRIMLYAKDSG 362 Query 364 CSFPNCDVPGYLTEVHHVTDFAQCQETDINELTQGCGPHHQLATTGGWITRKRKDGTTE 422 CS P CDVPGY EVHHVT +AQC+ TD+N+LT GCG HH LA GW TRK G TE Sbjct 363 CSAPGCDVPGYYCEVHHVTPYAQCRNTDVNDLTLGCGGHHPLAER-GWTTRKNAHGDTE 420 >gi|254823500|ref|ZP_05228501.1| hypothetical protein MintA_26458 [Mycobacterium intracellulare ATCC 13950] Length=461 Score = 510 bits (1313), Expect = 2e-142, Method: Compositional matrix adjust. Identities = 282/453 (63%), Positives = 330/453 (73%), Gaps = 0/453 (0%) Query 1 MYSSSREEAVAAFDNLDTALNRVLKVSPDDLTIPECLAMLQRCEKIRRRLPAAEHPFINK 60 M S+ + A FD LD ++R + D LT+ + LA+L+RCE++RRR+P EHP +N Sbjct 1 MSSTGLPDVDAVFDALDAEVDRACALVLDALTVQQQLAVLERCERLRRRIPVIEHPLLNS 60 Query 61 LADQTDQTELGGKLPFALAERLHISRGEASRRIHEAADLGPRRTLTGQPLPPLLTATAAA 120 LA Q +LGG L AL ER+ ISR EASRRI EAADLG R LTG+PLPP+L ATAAA Sbjct 61 LARQAPSQDLGGGLAHALTERILISRHEASRRIKEAADLGQRHGLTGEPLPPVLAATAAA 120 Query 121 QRAGHLGPAHVQVIRCFLHQLPHHVDLPTREKAEAELATLGGRFRPDQLHKLATKLADCL 180 QRAG LG V VIR F HQLP V RE AEA+LA G +F P+ L +LA ++D L Sbjct 121 QRAGDLGAGQVAVIRKFCHQLPGWVSAAAREFAEAQLAGFGTQFGPEHLKELARGMSDAL 180 Query 181 NPDGNYNDTDRARRRSIILGNQGPDGMSAISGYLTPEARATVDAVLAKLAAPGMANPADD 240 NPDG + D DRAR R + LGNQ DGMS + G +TPE RAT +AV AKL APGM NP DD Sbjct 181 NPDGIFTDEDRARSRGVTLGNQQADGMSELRGLITPELRATFEAVEAKLGAPGMCNPLDD 240 Query 241 TPCLAGTPSQAAIEADTRSAGQRHHDGLLAALRALLCSGELGQHNGLPAAIIVSTSLTEL 300 PC+ GTPSQAAI+ DTRS QR HD LLAALR LL SGELGQHNGLPA+IIV+T+L EL Sbjct 241 IPCVEGTPSQAAIDGDTRSKAQRGHDALLAALRGLLASGELGQHNGLPASIIVTTTLAEL 300 Query 301 QSRAGHALTGGGTLLPMSDVIRLASHANHYLRIFDHGRELALYHTKRLASPGQRIVLYAK 360 ++ AG ALTGGGT+LPMS+VIRL HA+HYL IFD G+ LALYHTKRLASPGQRIVLYAK Sbjct 301 EAAAGRALTGGGTILPMSEVIRLGRHAHHYLAIFDKGKALALYHTKRLASPGQRIVLYAK 360 Query 361 DRGCSFPNCDVPGYLTEVHHVTDFAQCQETDINELTQGCGPHHQLATTGGWITRKRKDGT 420 DRGC+ P C V GY EVHH TD+++C TDIN+LT CGPHH++ GGW TRK G Sbjct 361 DRGCTAPGCTVSGYYCEVHHTTDYSKCHSTDINQLTFACGPHHRMLNPGGWTTRKNTRGE 420 Query 421 TEWLPPAHLDHGQPRTNSYFHPEKLLHDSDEDD 453 TEW PP HL+ GQP TN+Y HPEKLLH DD Sbjct 421 TEWKPPPHLERGQPPTNTYHHPEKLLHHESNDD 453 >gi|254775286|ref|ZP_05216802.1| hypothetical protein MaviaA2_11531 [Mycobacterium avium subsp. avium ATCC 25291] Length=469 Score = 508 bits (1307), Expect = 1e-141, Method: Compositional matrix adjust. Identities = 273/447 (62%), Positives = 328/447 (74%), Gaps = 1/447 (0%) Query 6 REEAVAAFDNLDTALNRVLKVSPDDLTIPECLAMLQRCEKIRRRLPAAEHPFINKLADQT 65 RE+ +D L + R+ + S D LT PE + +L+ E RRL H IN++ Sbjct 7 REDIQDDYDVLRAVVARIQRHSYDALTNPERIRLLEVLEHQTRRLQVPGHQLINQIEQDA 66 Query 66 DQTELGGKLPFALAERLHISRGEASRRIHEAADLGPRRTLTGQPLPPLLTATAAAQRAGH 125 E+GGKL LA+RL I+R EA+RRI +A DLG RRTLTG+PLPP ATAAAQR G Sbjct 67 TPAEIGGKLAHLLADRLLITRAEAARRIDDARDLGVRRTLTGEPLPPRYAATAAAQRDGR 126 Query 126 LGPAHVQVIRCFLHQLPHHVDLPTREKAEAELATLGGRFRPDQLHKLATKLADCLNPDGN 185 +G +HV VIR F QLP VD PTR+ AEA+LA G RP+ L K+A ++A LNPDG Sbjct 127 IGASHVAVIRRFFDQLPCWVDAPTRDAAEADLARWAGEHRPESLRKVADRIACYLNPDGV 186 Query 186 YNDTDRARRRSIILGNQGPDGMSAISGYLTPEARATVDAVLAKLAAPGMANPADDTPCLA 245 ++D DR R R + LG Q PDGMS + G+LTPEARAT++AVLAKLAAPGM NP D P + Sbjct 187 FHDEDRLRHRGLTLGAQQPDGMSQLRGWLTPEARATIEAVLAKLAAPGMCNPDDPAPVVD 246 Query 246 GTPSQAAIEADTRSAGQRHHDGLLAALRALLCSGELGQHNGLPAAIIVSTSLTELQSRAG 305 G P Q AI+ D+RSA QR+HDGL AALRA+L SG+LGQHNGLPA+IIV+T+L +L+S AG Sbjct 247 GPPGQEAIQRDSRSAAQRNHDGLNAALRAVLASGKLGQHNGLPASIIVTTTLRDLESAAG 306 Query 306 HALTGGGTLLPMSDVIRLASHANHYLRIFDHGRELALYHTKRLASPGQRIVLYAKDRGCS 365 LTGGGTLLPMSDVIRLA HA+HYL +FD+G+ LALYHTKRLASPGQRIVLYAKDRGCS Sbjct 307 QGLTGGGTLLPMSDVIRLARHAHHYLAVFDNGKPLALYHTKRLASPGQRIVLYAKDRGCS 366 Query 366 FPNCDVPGYLTEVHHVTDFAQCQETDINELTQGCGPHHQLATTGGWITRKRKDGTTEWLP 425 P CDV GY EVHHVT +A+C TDI++LT CG HH LA GWITRK G TEW+P Sbjct 367 HPGCDVSGYYCEVHHVTGYAKCGRTDIDQLTFACGGHHPLAEQ-GWITRKNGRGETEWIP 425 Query 426 PAHLDHGQPRTNSYFHPEKLLHDSDED 452 P HLDHG+PRTN++ HPEKL+ DSD D Sbjct 426 PPHLDHGRPRTNAFHHPEKLVADSDND 452 >gi|333991762|ref|YP_004524376.1| hypothetical protein JDM601_3122 [Mycobacterium sp. JDM601] gi|333487730|gb|AEF37122.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=458 Score = 506 bits (1303), Expect = 3e-141, Method: Compositional matrix adjust. Identities = 278/457 (61%), Positives = 328/457 (72%), Gaps = 5/457 (1%) Query 1 MYSSSREEAVAAFDNLDTALNRVLKVSPDDLTIPECLAMLQRCEKIRRRLPAAEHPFINK 60 M SS REE V AFD L L++ L++ LT ECLA+LQRCE +RRRLPA EHP +N Sbjct 1 MRSSYREEIVEAFDALSADLDKALELDFSALTPRECLALLQRCETLRRRLPAVEHPMVNH 60 Query 61 LADQTDQTELGGKLPFALAERLHISRGEASRRIHEAADLGPRRTLTGQPLPPLLTATAAA 120 +A TD ELGGK + LA+ L I+RG+A RRI EAADLGPRRTLTGQPL P+L A A A Sbjct 61 VA-ATDPEELGGKPRWVLADELGITRGQAGRRIDEAADLGPRRTLTGQPLAPVLPAVATA 119 Query 121 QRAGHLGPAHVQVIRCFLHQLPHHVDLPTREKAEAELATLGGRFRPDQLHKLATKLADCL 180 QR G LG H+ VIR LP +D T +AE LA L RPD+L KLA ++AD L Sbjct 120 QRKGRLGAEHIAVIRALFDYLPDSIDAGTLAQAEQHLADLAAHHRPDELAKLAQRVADYL 179 Query 181 NPDGNYNDTD-RARRRSIILGNQGPDGMSAISGYLTPEARATVDAVLAKLAAPGMANPAD 239 PDGN+ D + RA+RR I LG Q DGMSAI G+L P ARA +DAVLA AAPG NPAD Sbjct 180 RPDGNHTDNEQRAKRRGITLGPQDRDGMSAIKGHLDPHARAALDAVLAHWAAPGRCNPAD 239 Query 240 DTPCLAGTPSQAAIEADTRSAGQRHHDGLLAALRALLCSGELGQHNGLPAAIIVSTSLTE 299 +TPC +GTPSQA I+ D RSA QR+HD L A LL S ELG H+GLPA I+VS SL E Sbjct 240 ETPCRSGTPSQAHIDNDRRSAAQRNHDALAAMATNLLASAELGSHHGLPATIVVSLSLAE 299 Query 300 LQSRAGHALTGGGTLLPMSDVIRLASHANHYLRIFDHGRELALYHTKRLASPGQRIVLYA 359 L++ AG A T GGT LP+ DVI LASHA+HYLRI+D +++AL+HTKRLA+PGQR+VLY Sbjct 300 LEAAAGKATTAGGTWLPLHDVIALASHAHHYLRIYDGAKQIALFHTKRLATPGQRLVLYD 359 Query 360 KDRGCSFPNCDVPGYLTEVHHVTDFAQCQETDINELTQGCGPHHQLATTGGWITRKRKDG 419 +RGC+ P C VP LTEVHH D+AQ TDI++LT CGPHH+L + GW TRKR DG Sbjct 360 TERGCTHPGCTVPAQLTEVHHNHDYAQHPRTDIDDLTLRCGPHHRL-LSNGWRTRKRADG 418 Query 420 TTEWLPPAHLDHGQPRTNSYFHPEKLLHDS--DEDDP 454 TE LPPAHLD G+PRTNSY HPEKLL DS D+DDP Sbjct 419 VTETLPPAHLDRGRPRTNSYHHPEKLLRDSANDDDDP 455 >gi|41407982|ref|NP_960818.1| hypothetical protein MAP1884c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41396336|gb|AAS04201.1| hypothetical protein MAP_1884c [Mycobacterium avium subsp. paratuberculosis K-10] Length=468 Score = 506 bits (1302), Expect = 4e-141, Method: Compositional matrix adjust. Identities = 294/450 (66%), Positives = 345/450 (77%), Gaps = 1/450 (0%) Query 1 MYSSSREEAVAAFDNLDTALNRVLKVSPDDLTIPECLAMLQRCEKIRRRLPAAEHPFINK 60 M+SS+REE A D L A++RVL S D LT PE L +L+ E+ RRL A H IN+ Sbjct 1 MHSSTREEIRADVDALRAAVSRVLGHSYDALTTPERLRLLEIFERETRRLRAPGHQLINQ 60 Query 61 LADQTDQTELGGKLPFALAERLHISRGEASRRIHEAADLGPRRTLTGQPLPPLLTATAAA 120 LA+Q+D TELGG+L FALAERLHI+R +ASRRI EAADLGPRR LTG+PLP LL ATAAA Sbjct 61 LAEQSDPTELGGRLSFALAERLHITRSDASRRIAEAADLGPRRALTGEPLPALLPATAAA 120 Query 121 QRAGHLGPAHVQVIRCFLHQLPHHVDLPTREKAEAELATLGGRFRPDQLHKLATKLADCL 180 QR G +G HV VIR F QLP VD+ T E AE +LA +FRPDQL KLA +L DCL Sbjct 121 QRYGAIGTDHVAVIRQFFDQLPEAVDVETCEHAERQLAAQATQFRPDQLSKLARRLMDCL 180 Query 181 NPDGNYNDTDRARRRSIILGNQGPDGMSAISGYLTPEARATVDAVLAKLAAPGMANPADD 240 NPDG Y+D DRAR R ++LGNQ DGMS +SG+LTPEARA+ +AVLAKLAA GM NP DD Sbjct 181 NPDGRYSDEDRARARGLVLGNQQADGMSRLSGWLTPEARASWEAVLAKLAALGMCNPDDD 240 Query 241 TPCLAGTPSQAAIEADTRSAGQRHHDGLLAALRALLCSGELGQHNGLPAAIIVSTSLTEL 300 P + G P +AA + D+RSA QR+HDGL AALRALL G+LGQHNGLPA+IIV+T+L +L Sbjct 241 APVVDGPPPEAAAQRDSRSAAQRNHDGLNAALRALLAGGKLGQHNGLPASIIVTTTLRDL 300 Query 301 QSRAGHALTGGGTLLPMSDVIRLASHANHYLRIFDHGRELALYHTKRLASPGQRIVLYAK 360 +S AG LTGGGTLLPMSDVIRLA HA+HYL +FD+G+ LALYHTKRLASPGQRIVLYAK Sbjct 301 ESAAGKGLTGGGTLLPMSDVIRLARHAHHYLAVFDNGKPLALYHTKRLASPGQRIVLYAK 360 Query 361 DRGCSFPNCDVPGYLTEVHHVTDFAQCQETDINELTQGCGPHHQLATTGGWITRKRKDGT 420 DRGCS P CDV GY EVHHVT +A+C TDI++LT CG HH LA GWITRK G Sbjct 361 DRGCSHPGCDVSGYSCEVHHVTGYAKCGRTDIDQLTFACGGHHPLAEQ-GWITRKNGRGE 419 Query 421 TEWLPPAHLDHGQPRTNSYFHPEKLLHDSD 450 TEW+PP HL+ GQPR NS+ HPE +L D++ Sbjct 420 TEWIPPPHLERGQPRVNSFHHPEDMLCDTE 449 >gi|118463168|ref|YP_881993.1| hypothetical protein MAV_2806 [Mycobacterium avium 104] gi|118164455|gb|ABK65352.1| conserved hypothetical protein [Mycobacterium avium 104] Length=469 Score = 505 bits (1300), Expect = 8e-141, Method: Compositional matrix adjust. Identities = 271/447 (61%), Positives = 326/447 (73%), Gaps = 1/447 (0%) Query 6 REEAVAAFDNLDTALNRVLKVSPDDLTIPECLAMLQRCEKIRRRLPAAEHPFINKLADQT 65 RE+ +D L + R+ + S D LT PE + +L+ E RRL H IN++ Sbjct 7 REDIQDDYDVLRAVVARIQRHSYDALTNPERIRLLEVLEYQTRRLQVPGHQLINQIEQDA 66 Query 66 DQTELGGKLPFALAERLHISRGEASRRIHEAADLGPRRTLTGQPLPPLLTATAAAQRAGH 125 E+GGKL LA+RL I+R EA+RRI +A DLG RRTLTG+PLPP ATAAAQR G Sbjct 67 TPAEIGGKLAHVLADRLLITRAEAARRIDDARDLGVRRTLTGEPLPPRYAATAAAQRDGR 126 Query 126 LGPAHVQVIRCFLHQLPHHVDLPTREKAEAELATLGGRFRPDQLHKLATKLADCLNPDGN 185 +G +HV VIR F QLP VD PTR+ AEA+LA G RP+ L K+A ++A NPDG Sbjct 127 IGASHVAVIRRFFDQLPCWVDAPTRDAAEADLARWAGEHRPESLRKVADRIACYFNPDGV 186 Query 186 YNDTDRARRRSIILGNQGPDGMSAISGYLTPEARATVDAVLAKLAAPGMANPADDTPCLA 245 ++D DR R R + LG Q PDGMS + G+LTPEARATV+AVLAKLAAPGM NP DD P + Sbjct 187 FHDEDRLRHRGLTLGAQQPDGMSQLRGWLTPEARATVEAVLAKLAAPGMCNPDDDAPVVD 246 Query 246 GTPSQAAIEADTRSAGQRHHDGLLAALRALLCSGELGQHNGLPAAIIVSTSLTELQSRAG 305 G P +AA + D+RSA QR+HDGL AALRALL G+LGQHNGLPA+IIV+T+L +L+S AG Sbjct 247 GPPPEAASQRDSRSAAQRNHDGLNAALRALLAGGKLGQHNGLPASIIVTTTLRDLESAAG 306 Query 306 HALTGGGTLLPMSDVIRLASHANHYLRIFDHGRELALYHTKRLASPGQRIVLYAKDRGCS 365 LT GGTLLPMS+VIRLA HA+HYL +FD+G+ LALYHTKRLASPGQRIVLYAKDRGCS Sbjct 307 KGLTAGGTLLPMSEVIRLARHAHHYLAVFDNGKPLALYHTKRLASPGQRIVLYAKDRGCS 366 Query 366 FPNCDVPGYLTEVHHVTDFAQCQETDINELTQGCGPHHQLATTGGWITRKRKDGTTEWLP 425 P CDV GY EVHHVT +A+C TDI++LT CG HH LA GWITRK G TEW+P Sbjct 367 HPGCDVSGYYCEVHHVTGYAKCGRTDIDQLTFACGGHHPLAEQ-GWITRKNGRGETEWIP 425 Query 426 PAHLDHGQPRTNSYFHPEKLLHDSDED 452 P HLDHG+PRTN++ HPEKL+ DSD D Sbjct 426 PPHLDHGRPRTNAFHHPEKLVADSDND 452 >gi|254818822|ref|ZP_05223823.1| hypothetical protein MintA_02799 [Mycobacterium intracellulare ATCC 13950] Length=454 Score = 503 bits (1296), Expect = 2e-140, Method: Compositional matrix adjust. Identities = 256/454 (57%), Positives = 319/454 (71%), Gaps = 1/454 (0%) Query 1 MYSSSREEAVAAFDNLDTALNRVLKVSPDDLTIPECLAMLQRCEKIRRRLPAAEHPFINK 60 M SSSR+E V FD +D L+R+ +S + T PE L L+R E++ RRL A +H IN+ Sbjct 1 MGSSSRDEIVEVFDAIDADLDRLCALSFEVFTTPERLRTLERIERVARRLRAPQHELINQ 60 Query 61 LADQTDQTELGGKLPFALAERLHISRGEASRRIHEAADLGPRRTLTGQPLPPLLTATAAA 120 L Q TELGG L ALA+RL I++ EA RR+ EAADLG R+ LTG+ L P L+ATAAA Sbjct 61 LRAQATTTELGGTLRCALADRLRITKSEAGRRVDEAADLGERQALTGEVLAPTLSATAAA 120 Query 121 QRAGHLGPAHVQVIRCFLHQLPHHVDLPTREKAEAELATLGGRFRPDQLHKLATKLADCL 180 QR G +G HV+VIR F LP VD +E A+ +LA FRPD+L K A +L + Sbjct 121 QRQGLIGDGHVRVIRGFFANLPSGVDPCIQEHADQDLAQQARGFRPDELQKYAHRLMGWI 180 Query 181 NPDGNYNDTDRARRRSIILGNQGPDGMSAISGYLTPEARATVDAVLAKLAAPGMANPADD 240 NPDG D +RAR+R I +G Q DGMS I GYLTPEARAT + VLAKL APG NP D Sbjct 181 NPDGKLKDGERARKRGITIGAQQYDGMSPIRGYLTPEARATFEPVLAKLGAPGACNPDGD 240 Query 241 TPCLAGTPSQAAIEADTRSAGQRHHDGLLAALRALLCSGELGQHNGLPAAIIVSTSLTEL 300 P + P A+ D R+ QR+HDGLL LRALL SGELG HNGLP +++VSTSL EL Sbjct 241 VPFIDEVPDDVAVRRDLRTPAQRNHDGLLVGLRALLASGELGCHNGLPVSVVVSTSLQEL 300 Query 301 QSRAGHALTGGGTLLPMSDVIRLASHANHYLRIFDHGRELALYHTKRLASPGQRIVLYAK 360 ++ AG +TGGG+L+PMSD+IR+ASHA+HYL IFD GR L+L+HTKRLASP QRI+LYAK Sbjct 301 EAAAGKGITGGGSLVPMSDLIRMASHAHHYLAIFDRGRALSLHHTKRLASPAQRIMLYAK 360 Query 361 DRGCSFPNCDVPGYLTEVHHVTDFAQCQETDINELTQGCGPHHQLATTGGWITRKRKDGT 420 DRGC+ P CD P Y ++VHHV+ + TDI++LT CGP ++LA GW TRK G Sbjct 361 DRGCTKPGCDAPAYHSQVHHVSGWTTTHRTDIDDLTLACGPDNRLAEK-GWTTRKNARGD 419 Query 421 TEWLPPAHLDHGQPRTNSYFHPEKLLHDSDEDDP 454 TEWLPPAHLDHGQPRTN++ HPE+ L+ ++DDP Sbjct 420 TEWLPPAHLDHGQPRTNAFHHPERFLNYDEDDDP 453 >gi|15840590|ref|NP_335627.1| hypothetical protein MT1183 [Mycobacterium tuberculosis CDC1551] gi|13880770|gb|AAK45441.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551] Length=499 Score = 502 bits (1292), Expect = 5e-140, Method: Compositional matrix adjust. Identities = 276/454 (61%), Positives = 323/454 (72%), Gaps = 1/454 (0%) Query 1 MYSSSREEAVAAFDNLDTALNRVLKVSPDDLTIPECLAMLQRCEKIRRRLPAAEHPFINK 60 M S +REE AA D +L+RVL + D LT PE LA LQR E RRR AAEH IN+ Sbjct 46 MRSDTREEISAALDAYHASLSRVLDLKCDALTTPELLACLQRLEVERRRQGAAEHALINQ 105 Query 61 LADQTDQTELGGKLPFALAERLHISRGEASRRIHEAADLGPRRTLTGQPLPPLLTATAAA 120 LA Q + ELGG L ALA RLHI+ GEASRRI EA DLG RR LTG+PLP LTATAAA Sbjct 106 LAGQACEEELGGTLRTALANRLHITPGEASRRIAEAEDLGERRALTGEPLPAQLTATAAA 165 Query 121 QRAGHLGPAHVQVIRCFLHQLPHHVDLPTREKAEAELATLGGRFRPDQLHKLATKLADCL 180 QR G +G H++ I+ F +L VDL RE AEA+LA L RPD LH LAT+L D L Sbjct 166 QREGKIGREHIKEIQAFFKELSAAVDLGIREAAEAQLAELATSRRPDHLHGLATQLMDWL 225 Query 181 NPDGNYNDTDRARRRSIILGNQGPDGMSAISGYLTPEARATVDAVLAKLAAPGMANPADD 240 +PDGN++D +RAR+R I +G Q DGMS ISG LTPE RAT++AVLAKLAAPG NP D Sbjct 226 HPDGNFSDQERARKRGITMGKQEFDGMSRISGLLTPELRATIEAVLAKLAAPGACNPDDQ 285 Query 241 TPCLAGTPSQAAIEADTRSAGQRHHDGLLAALRALLCSGELGQHNGLPAAIIVSTSLTEL 300 TP +A TP A+ DTRS QR+HD LAALR LL SGELGQH GLP I+VST+L EL Sbjct 286 TPLVADTPDADAVRRDTRSQAQRNHDAFLAALRGLLASGELGQHKGLPVTIVVSTTLKEL 345 Query 301 QSRAGHALTGGGTLLPMSDVIRLASHANHYLRIFDHGRELALYHTKRLASPGQRIVLYAK 360 ++ G +TGGG+ +PMSD+IR+ASHANHYL +FD + LALYHTKRLASP QRI+LYAK Sbjct 346 EAATGKGVTGGGSRVPMSDLIRMASHANHYLALFDGAKPLALYHTKRLASPAQRIMLYAK 405 Query 361 DRGCSFPNCDVPGYLTEVHHVTDFAQCQETDINELTQGCGPHHQLATTGGWITRKRKDGT 420 DRGCS P CD P Y +EVHHVT + TDIN+LT CGP ++L GW TRK G Sbjct 406 DRGCSRPGCDAPAYHSEVHHVTPWTTTHRTDINDLTLACGPDNRLVEK-GWKTRKNAHGD 464 Query 421 TEWLPPAHLDHGQPRTNSYFHPEKLLHDSDEDDP 454 TEWLPP HLDHGQPR N Y HP K+L + D+D+P Sbjct 465 TEWLPPPHLDHGQPRINRYHHPAKILCEQDDDEP 498 >gi|254820262|ref|ZP_05225263.1| hypothetical protein MintA_10056 [Mycobacterium intracellulare ATCC 13950] Length=454 Score = 502 bits (1292), Expect = 6e-140, Method: Compositional matrix adjust. Identities = 283/452 (63%), Positives = 329/452 (73%), Gaps = 0/452 (0%) Query 1 MYSSSREEAVAAFDNLDTALNRVLKVSPDDLTIPECLAMLQRCEKIRRRLPAAEHPFINK 60 M S+ + A FD LD ++R + D LT+ + LA+L+RCE++RRR+P EHP +N Sbjct 1 MSSTGLPDVDAVFDALDAEVDRACALVLDVLTVQQQLAVLERCERLRRRIPVIEHPLLNS 60 Query 61 LADQTDQTELGGKLPFALAERLHISRGEASRRIHEAADLGPRRTLTGQPLPPLLTATAAA 120 LA Q ELGG L AL ER ISR EASRRI EA DLGPR LTG+PLPP L ATAAA Sbjct 61 LARQVPSQELGGGLAHALTERTLISRHEASRRIKEARDLGPRHGLTGEPLPPALPATAAA 120 Query 121 QRAGHLGPAHVQVIRCFLHQLPHHVDLPTREKAEAELATLGGRFRPDQLHKLATKLADCL 180 QRAG LG V VIR F HQLP V RE AEA+LA G +F P+ L +LA ++D L Sbjct 121 QRAGDLGAGQVAVIRKFYHQLPGWVSAAAREFAEAQLAGFGTQFGPEHLKELARGMSDAL 180 Query 181 NPDGNYNDTDRARRRSIILGNQGPDGMSAISGYLTPEARATVDAVLAKLAAPGMANPADD 240 NPDG + D DRAR R + LGNQ DGMS + G +TPE RAT +AV AKL APGM NP DD Sbjct 181 NPDGLFTDEDRARSRGVTLGNQQADGMSELRGLITPELRATFEAVEAKLGAPGMCNPLDD 240 Query 241 TPCLAGTPSQAAIEADTRSAGQRHHDGLLAALRALLCSGELGQHNGLPAAIIVSTSLTEL 300 PC+ GTPSQAAI+ DTRS QR HD LLA LR LL SGELGQHNGLPA+IIV+T+L EL Sbjct 241 IPCVDGTPSQAAIDRDTRSKAQRGHDALLAGLRGLLASGELGQHNGLPASIIVTTTLAEL 300 Query 301 QSRAGHALTGGGTLLPMSDVIRLASHANHYLRIFDHGRELALYHTKRLASPGQRIVLYAK 360 ++ AG ALTGGGT+LPMS+VIRLA HA+HYL IFD G+ LALYHTKRLASPGQRIVLYAK Sbjct 301 EAAAGRALTGGGTILPMSEVIRLARHAHHYLAIFDKGKALALYHTKRLASPGQRIVLYAK 360 Query 361 DRGCSFPNCDVPGYLTEVHHVTDFAQCQETDINELTQGCGPHHQLATTGGWITRKRKDGT 420 DRGC+ P C V GY EVHHVTD+A C TDIN+LT CGPHH++ GGW TRK G Sbjct 361 DRGCTAPGCTVSGYYCEVHHVTDYATCHSTDINDLTFACGPHHRMLNPGGWTTRKNPRGD 420 Query 421 TEWLPPAHLDHGQPRTNSYFHPEKLLHDSDED 452 TEW PP HL+ +PRTN++ HPEKLL D D+D Sbjct 421 TEWKPPPHLERNRPRTNTFHHPEKLLRDDDDD 452 >gi|333991217|ref|YP_004523831.1| hypothetical protein JDM601_2577 [Mycobacterium sp. JDM601] gi|333487185|gb|AEF36577.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=455 Score = 501 bits (1290), Expect = 9e-140, Method: Compositional matrix adjust. Identities = 275/454 (61%), Positives = 323/454 (72%), Gaps = 3/454 (0%) Query 1 MYSSSREEAVAAFDNLDTALNRVLKVSPDDLTIPECLAMLQRCEKIRRRLPAAEHPFINK 60 M SS REE V AFD L L++ L++ LT ECLA+LQRCE +RRRLPA EHP +N Sbjct 1 MRSSDREEIVEAFDALSADLDKALELDFSALTPRECLALLQRCETLRRRLPAVEHPMVNH 60 Query 61 LADQTDQTELGGKLPFALAERLHISRGEASRRIHEAADLGPRRTLTGQPLPPLLTATAAA 120 +A TD ELGGK + LA+ L I+RG+A RRI EAADLGPRRTLTGQPL P+L A A A Sbjct 61 VA-ATDPEELGGKPRWVLADELGITRGQARRRIDEAADLGPRRTLTGQPLAPVLPAVATA 119 Query 121 QRAGHLGPAHVQVIRCFLHQLPHHVDLPTREKAEAELATLGGRFRPDQLHKLATKLADCL 180 QR G LG + VIR LP +D T +AE LA L RPD+L KLA ++AD L Sbjct 120 QRKGQLGAERIAVIRALFDYLPDSIDAGTLAQAEQHLADLAAHHRPDELAKLAQRVADYL 179 Query 181 NPDGNYNDTD-RARRRSIILGNQGPDGMSAISGYLTPEARATVDAVLAKLAAPGMANPAD 239 PDGN+ D + RA+RR I LG Q DGMSAI G+L P ARA +DAVLA AAPG NPAD Sbjct 180 RPDGNHTDNEQRAKRRGITLGPQDRDGMSAIKGHLDPHARAALDAVLAHWAAPGRCNPAD 239 Query 240 DTPCLAGTPSQAAIEADTRSAGQRHHDGLLAALRALLCSGELGQHNGLPAAIIVSTSLTE 299 +TPC +GTPSQA I+ D RSA QR+HD L A LL S ELG H+GLPA I+VS SL E Sbjct 240 ETPCRSGTPSQAHIDNDRRSAAQRNHDALAAMATNLLASAELGSHHGLPATIVVSLSLAE 299 Query 300 LQSRAGHALTGGGTLLPMSDVIRLASHANHYLRIFDHGRELALYHTKRLASPGQRIVLYA 359 L++ AG A T GGT LP+ DVI LASHA+HYLRI+D +++AL+HTKRLA+PGQR+VLY Sbjct 300 LEAAAGKATTAGGTWLPLHDVIALASHAHHYLRIYDGAKQIALFHTKRLATPGQRLVLYD 359 Query 360 KDRGCSFPNCDVPGYLTEVHHVTDFAQCQETDINELTQGCGPHHQLATTGGWITRKRKDG 419 +RGC+ P C VP LTEVHH D+AQ TDI++LT CGPHH+L + GW TRKR DG Sbjct 360 TERGCTHPGCTVPAQLTEVHHNHDYAQHPRTDIDDLTLRCGPHHRL-LSNGWRTRKRADG 418 Query 420 TTEWLPPAHLDHGQPRTNSYFHPEKLLHDSDEDD 453 TE LP AHLD GQPRTNSY HPEKLL DS DD Sbjct 419 VTETLPLAHLDRGQPRTNSYHHPEKLLRDSANDD 452 >gi|339631213|ref|YP_004722855.1| hypothetical protein MAF_11650 [Mycobacterium africanum GM041182] gi|339330569|emb|CCC26237.1| conserved hypothetical protein [Mycobacterium africanum GM041182] Length=482 Score = 500 bits (1287), Expect = 2e-139, Method: Compositional matrix adjust. Identities = 275/454 (61%), Positives = 322/454 (71%), Gaps = 1/454 (0%) Query 1 MYSSSREEAVAAFDNLDTALNRVLKVSPDDLTIPECLAMLQRCEKIRRRLPAAEHPFINK 60 M S +REE AA D +L+RVL + D LT PE LA LQR E RRR AAEH IN+ Sbjct 29 MRSDTREEISAALDAYHASLSRVLDLKCDALTTPELLACLQRLEVERRRQGAAEHALINQ 88 Query 61 LADQTDQTELGGKLPFALAERLHISRGEASRRIHEAADLGPRRTLTGQPLPPLLTATAAA 120 LA Q + ELGG L ALA RLHI+ GEASRRI EA DLG RR LTG+PLP LTATAAA Sbjct 89 LAGQACEEELGGTLRTALANRLHITPGEASRRIAEAEDLGERRALTGEPLPAQLTATAAA 148 Query 121 QRAGHLGPAHVQVIRCFLHQLPHHVDLPTREKAEAELATLGGRFRPDQLHKLATKLADCL 180 QR G +G H++ I+ F +L VDL RE AEA+LA L RPD LH LAT+L D L Sbjct 149 QREGKIGREHIKEIQAFFKELSAAVDLGIREAAEAQLAELATSRRPDHLHGLATQLMDWL 208 Query 181 NPDGNYNDTDRARRRSIILGNQGPDGMSAISGYLTPEARATVDAVLAKLAAPGMANPADD 240 +PDGN++D +RAR+R I +G Q DGMS ISG LTPE RAT++AVLAKLAAPG NP D Sbjct 209 HPDGNFSDQERARKRGITMGKQEFDGMSRISGLLTPELRATIEAVLAKLAAPGACNPDDQ 268 Query 241 TPCLAGTPSQAAIEADTRSAGQRHHDGLLAALRALLCSGELGQHNGLPAAIIVSTSLTEL 300 TP + TP A+ DTRS QR+HD LAALR LL SGELGQH GLP I+VST+L EL Sbjct 269 TPLVDDTPDADAVRRDTRSQAQRNHDAFLAALRGLLASGELGQHKGLPVTIVVSTTLKEL 328 Query 301 QSRAGHALTGGGTLLPMSDVIRLASHANHYLRIFDHGRELALYHTKRLASPGQRIVLYAK 360 ++ G +TGGG+ +PMSD+IR+ASHANHYL +FD + LALYHTKRLASP QRI+LYAK Sbjct 329 EAATGKGVTGGGSRVPMSDLIRMASHANHYLALFDGAKPLALYHTKRLASPAQRIMLYAK 388 Query 361 DRGCSFPNCDVPGYLTEVHHVTDFAQCQETDINELTQGCGPHHQLATTGGWITRKRKDGT 420 DRGCS P CD P Y +EVHHVT + TDIN+LT CGP ++L GW TRK G Sbjct 389 DRGCSRPGCDAPAYHSEVHHVTPWTTTHRTDINDLTLACGPDNRLVEK-GWKTRKNAKGD 447 Query 421 TEWLPPAHLDHGQPRTNSYFHPEKLLHDSDEDDP 454 TEWLPP HLDHGQPR N Y HP K+L + D+D+P Sbjct 448 TEWLPPPHLDHGQPRINRYHHPAKILCEQDDDEP 481 >gi|254550150|ref|ZP_05140597.1| hypothetical protein Mtube_06779 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|313658009|ref|ZP_07814889.1| hypothetical protein MtubKV_06299 [Mycobacterium tuberculosis KZN V2475] Length=454 Score = 500 bits (1287), Expect = 2e-139, Method: Compositional matrix adjust. Identities = 275/454 (61%), Positives = 322/454 (71%), Gaps = 1/454 (0%) Query 1 MYSSSREEAVAAFDNLDTALNRVLKVSPDDLTIPECLAMLQRCEKIRRRLPAAEHPFINK 60 M S +REE AA D +L+RVL + D LT PE LA LQR E RRR AAEH IN+ Sbjct 1 MRSDTREEISAALDAYHASLSRVLDLKCDALTTPELLACLQRLEVERRRQGAAEHALINQ 60 Query 61 LADQTDQTELGGKLPFALAERLHISRGEASRRIHEAADLGPRRTLTGQPLPPLLTATAAA 120 LA Q + ELGG L ALA RLHI+ GEASRRI EA DLG RR LTG+PLP LTATAAA Sbjct 61 LAGQACEEELGGTLRTALANRLHITPGEASRRIAEAEDLGERRALTGEPLPAQLTATAAA 120 Query 121 QRAGHLGPAHVQVIRCFLHQLPHHVDLPTREKAEAELATLGGRFRPDQLHKLATKLADCL 180 QR G +G H++ I+ F +L VDL RE AEA+LA L RPD LH LAT+L D L Sbjct 121 QREGKIGREHIKEIQAFFKELSAAVDLGIREAAEAQLAELATSRRPDHLHGLATQLMDWL 180 Query 181 NPDGNYNDTDRARRRSIILGNQGPDGMSAISGYLTPEARATVDAVLAKLAAPGMANPADD 240 +PDGN++D +RAR+R I +G Q DGMS ISG LTPE RAT++AVLAKLAAPG NP D Sbjct 181 HPDGNFSDQERARKRGITMGKQEFDGMSRISGLLTPELRATIEAVLAKLAAPGACNPDDQ 240 Query 241 TPCLAGTPSQAAIEADTRSAGQRHHDGLLAALRALLCSGELGQHNGLPAAIIVSTSLTEL 300 TP + TP A+ DTRS QR+HD LAALR LL SGELGQH GLP I+VST+L EL Sbjct 241 TPVVDDTPDADAVRRDTRSQAQRNHDAFLAALRGLLASGELGQHKGLPVTIVVSTTLKEL 300 Query 301 QSRAGHALTGGGTLLPMSDVIRLASHANHYLRIFDHGRELALYHTKRLASPGQRIVLYAK 360 ++ G +TGGG+ +PMSD+IR+ASHANHYL +FD + LALYHTKRLASP QRI+LYAK Sbjct 301 EAATGKGVTGGGSRVPMSDLIRMASHANHYLALFDGAKPLALYHTKRLASPAQRIMLYAK 360 Query 361 DRGCSFPNCDVPGYLTEVHHVTDFAQCQETDINELTQGCGPHHQLATTGGWITRKRKDGT 420 DRGCS P CD P Y +EVHHVT + TDIN+LT CGP ++L GW TRK G Sbjct 361 DRGCSRPGCDAPAYHSEVHHVTPWTTTHRTDINDLTLACGPDNRLVEK-GWKTRKNAHGD 419 Query 421 TEWLPPAHLDHGQPRTNSYFHPEKLLHDSDEDDP 454 TEWLPP HLDHGQPR N Y HP K+L + D+D+P Sbjct 420 TEWLPPPHLDHGQPRINRYHHPAKILCEQDDDEP 453 >gi|167969293|ref|ZP_02551570.1| hypothetical protein MtubH3_15205 [Mycobacterium tuberculosis H37Ra] gi|254231420|ref|ZP_04924747.1| conserved hypothetical protein [Mycobacterium tuberculosis C] gi|297633692|ref|ZP_06951472.1| hypothetical protein MtubK4_06204 [Mycobacterium tuberculosis KZN 4207] gi|297730679|ref|ZP_06959797.1| hypothetical protein MtubKR_06294 [Mycobacterium tuberculosis KZN R506] gi|61250849|sp|P0A5D9.1|Y1148_MYCTU RecName: Full=Uncharacterized protein Rv1148c/MT1183 gi|61250851|sp|P0A5E0.1|Y1179_MYCBO RecName: Full=Uncharacterized protein Mb1179c gi|124600479|gb|EAY59489.1| conserved hypothetical protein [Mycobacterium tuberculosis C] Length=454 Score = 499 bits (1286), Expect = 3e-139, Method: Compositional matrix adjust. Identities = 275/454 (61%), Positives = 322/454 (71%), Gaps = 1/454 (0%) Query 1 MYSSSREEAVAAFDNLDTALNRVLKVSPDDLTIPECLAMLQRCEKIRRRLPAAEHPFINK 60 M S +REE AA D +L+RVL + D LT PE LA LQR E RRR AAEH IN+ Sbjct 1 MRSDTREEISAALDAYHASLSRVLDLKCDALTTPELLACLQRLEVERRRQGAAEHALINQ 60 Query 61 LADQTDQTELGGKLPFALAERLHISRGEASRRIHEAADLGPRRTLTGQPLPPLLTATAAA 120 LA Q + ELGG L ALA RLHI+ GEASRRI EA DLG RR LTG+PLP LTATAAA Sbjct 61 LAGQACEEELGGTLRTALANRLHITPGEASRRIAEAEDLGERRALTGEPLPAQLTATAAA 120 Query 121 QRAGHLGPAHVQVIRCFLHQLPHHVDLPTREKAEAELATLGGRFRPDQLHKLATKLADCL 180 QR G +G H++ I+ F +L VDL RE AEA+LA L RPD LH LAT+L D L Sbjct 121 QREGKIGREHIKEIQAFFKELSAAVDLGIREAAEAQLAELATSRRPDHLHGLATQLMDWL 180 Query 181 NPDGNYNDTDRARRRSIILGNQGPDGMSAISGYLTPEARATVDAVLAKLAAPGMANPADD 240 +PDGN++D +RAR+R I +G Q DGMS ISG LTPE RAT++AVLAKLAAPG NP D Sbjct 181 HPDGNFSDQERARKRGITMGKQEFDGMSRISGLLTPELRATIEAVLAKLAAPGACNPDDQ 240 Query 241 TPCLAGTPSQAAIEADTRSAGQRHHDGLLAALRALLCSGELGQHNGLPAAIIVSTSLTEL 300 TP + TP A+ DTRS QR+HD LAALR LL SGELGQH GLP I+VST+L EL Sbjct 241 TPLVDDTPDADAVRRDTRSQAQRNHDAFLAALRGLLASGELGQHKGLPVTIVVSTTLKEL 300 Query 301 QSRAGHALTGGGTLLPMSDVIRLASHANHYLRIFDHGRELALYHTKRLASPGQRIVLYAK 360 ++ G +TGGG+ +PMSD+IR+ASHANHYL +FD + LALYHTKRLASP QRI+LYAK Sbjct 301 EAATGKGVTGGGSRVPMSDLIRMASHANHYLALFDGAKPLALYHTKRLASPAQRIMLYAK 360 Query 361 DRGCSFPNCDVPGYLTEVHHVTDFAQCQETDINELTQGCGPHHQLATTGGWITRKRKDGT 420 DRGCS P CD P Y +EVHHVT + TDIN+LT CGP ++L GW TRK G Sbjct 361 DRGCSRPGCDAPAYHSEVHHVTPWTTTHRTDINDLTLACGPDNRLVEK-GWKTRKNAHGD 419 Query 421 TEWLPPAHLDHGQPRTNSYFHPEKLLHDSDEDDP 454 TEWLPP HLDHGQPR N Y HP K+L + D+D+P Sbjct 420 TEWLPPPHLDHGQPRINRYHHPAKILCEQDDDEP 453 Lambda K H 0.318 0.135 0.409 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 946073480254 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40