BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1704c
Length=556
Score E
Sequences producing significant alignments: (Bits) Value
gi|15608842|ref|NP_216220.1| D-serine/alanine/glycine transporte... 1107 0.0
gi|15841162|ref|NP_336199.1| amino acid permease [Mycobacterium ... 1105 0.0
gi|340626710|ref|YP_004745162.1| putative D-serine/alanine/glyci... 1103 0.0
gi|339298291|gb|AEJ50401.1| amino acid permease [Mycobacterium t... 1103 0.0
gi|339294659|gb|AEJ46770.1| amino acid permease [Mycobacterium t... 1102 0.0
gi|121637611|ref|YP_977834.1| putative D-serine/alanine/glycine ... 1102 0.0
gi|254364543|ref|ZP_04980589.1| D-serine/alanine/glycine transpo... 1102 0.0
gi|289443161|ref|ZP_06432905.1| D-serine/alanine/glycine transpo... 759 0.0
gi|240170164|ref|ZP_04748823.1| D-serine/alanine/glycine transpo... 716 0.0
gi|240171970|ref|ZP_04750629.1| D-serine/alanine/glycine transpo... 692 0.0
gi|183981113|ref|YP_001849404.1| D-serine/D-alanine/glycine tran... 677 0.0
gi|118616628|ref|YP_904960.1| D-serine/D-alanine/glycine transpo... 661 0.0
gi|184200051|ref|YP_001854258.1| D-serine/D-alanine/glycine tran... 605 5e-171
gi|317126684|ref|YP_004100796.1| D-serine/D-alanine/glycine:prot... 595 9e-168
gi|226307959|ref|YP_002767919.1| D-serine/D-alanine/glycine tran... 586 3e-165
gi|229495051|ref|ZP_04388797.1| proline-specific permease ProY [... 585 5e-165
gi|226361392|ref|YP_002779170.1| D-serine/D-alanine/glycine tran... 579 5e-163
gi|111019262|ref|YP_702234.1| amino acid APC transporter [Rhodoc... 577 3e-162
gi|104783821|ref|YP_610319.1| D-alanine/D-serine/glycine permeas... 573 2e-161
gi|118473656|ref|YP_887890.1| D-serine/D-alanine/glycine transpo... 573 2e-161
gi|283786881|ref|YP_003366746.1| D-serine/D-alanine/glycine tran... 572 9e-161
gi|295098353|emb|CBK87443.1| Gamma-aminobutyrate permease and re... 572 9e-161
gi|296100970|ref|YP_003611116.1| D-alanine/D-serine/glycine perm... 570 2e-160
gi|334123746|ref|ZP_08497765.1| APC family amino acid-polyamine-... 570 2e-160
gi|325273631|ref|ZP_08139847.1| D-alanine/D-serine/glycine perme... 567 1e-159
gi|345297603|ref|YP_004826961.1| amino acid permease-associated ... 567 2e-159
gi|204926669|ref|ZP_03217871.1| D-serine/D-alanine/glycine trans... 566 3e-159
gi|16767644|ref|NP_463259.1| D-alanine/D-serine/glycine permease... 566 3e-159
gi|146310043|ref|YP_001175117.1| D-alanine/D-serine/glycine perm... 566 4e-159
gi|157163679|ref|YP_001460997.1| D-alanine/D-serine/glycine perm... 566 4e-159
gi|218556761|ref|YP_002389675.1| D-alanine/D-serine/glycine perm... 566 4e-159
gi|238910555|ref|ZP_04654392.1| D-alanine/D-serine/glycine perme... 566 5e-159
gi|340001743|ref|YP_004732627.1| D-serine/D-alanine/glycine tran... 566 5e-159
gi|161617670|ref|YP_001591635.1| D-alanine/D-serine/glycine perm... 565 5e-159
gi|323975443|gb|EGB70544.1| amino acid permease [Escherichia col... 565 5e-159
gi|301024490|ref|ZP_07188168.1| amino acid permease [Escherichia... 565 6e-159
gi|313500822|gb|ADR62188.1| D-alanine/D-serine/glycine permease ... 565 7e-159
gi|293407934|ref|ZP_06651774.1| D-alanine/D-serine/glycine perme... 565 8e-159
gi|283834827|ref|ZP_06354568.1| D-serine/D-alanine/glycine trans... 565 9e-159
gi|209749940|gb|ACI73277.1| transport protein of D-alanine / D-s... 565 9e-159
gi|15804799|ref|NP_290840.1| D-alanine/D-serine/glycine permease... 565 9e-159
gi|218707820|ref|YP_002415339.1| D-alanine/D-serine/glycine perm... 565 9e-159
gi|24115479|ref|NP_709989.1| D-alanine/D-serine/glycine permease... 565 1e-158
gi|26991520|ref|NP_746945.1| D-alanine/D-serine/glycine permease... 565 1e-158
gi|300821311|ref|ZP_07101459.1| amino acid permease [Escherichia... 565 1e-158
gi|161505099|ref|YP_001572211.1| D-alanine/D-serine/glycine perm... 564 1e-158
gi|323965602|gb|EGB61056.1| amino acid permease [Escherichia col... 564 1e-158
gi|170723793|ref|YP_001751481.1| D-alanine/D-serine/glycine perm... 564 1e-158
gi|218702910|ref|YP_002410539.1| D-alanine/D-serine/glycine perm... 564 2e-158
gi|62182842|ref|YP_219259.1| D-alanine/D-serine/glycine permease... 564 2e-158
>gi|15608842|ref|NP_216220.1| D-serine/alanine/glycine transporter protein CycA [Mycobacterium
tuberculosis H37Rv]
gi|148661501|ref|YP_001283024.1| D-serine/alanine/glycine transporter protein CycA [Mycobacterium
tuberculosis H37Ra]
gi|167969177|ref|ZP_02551454.1| D-serine/alanine/glycine transporter protein CycA [Mycobacterium
tuberculosis H37Ra]
gi|2326747|emb|CAB10961.1| PROBABLE D-SERINE/ALANINE/GLYCINE TRANSPORTER PROTEIN CYCA [Mycobacterium
tuberculosis H37Rv]
gi|148505653|gb|ABQ73462.1| D-serine/alanine/glycine transporter protein CycA [Mycobacterium
tuberculosis H37Ra]
Length=556
Score = 1107 bits (2864), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 556/556 (100%), Positives = 556/556 (100%), Gaps = 0/556 (0%)
Query 1 MPDDIAAADPTDTQPHLRRDLANRHIQLIAIGGAIGTGLFMGSGRTISLAGPAVMVVYGI 60
MPDDIAAADPTDTQPHLRRDLANRHIQLIAIGGAIGTGLFMGSGRTISLAGPAVMVVYGI
Sbjct 1 MPDDIAAADPTDTQPHLRRDLANRHIQLIAIGGAIGTGLFMGSGRTISLAGPAVMVVYGI 60
Query 61 IGFFVFFVLRAMGELLLSNLNYKSFVDFAADLRGPAAGFFVGWSYWFAWVVTGIADLVAI 120
IGFFVFFVLRAMGELLLSNLNYKSFVDFAADLRGPAAGFFVGWSYWFAWVVTGIADLVAI
Sbjct 61 IGFFVFFVLRAMGELLLSNLNYKSFVDFAADLRGPAAGFFVGWSYWFAWVVTGIADLVAI 120
Query 121 TGYARFWWPGLPIWVPALVTVALILAVNLFSVRHFGELEFWFALIKVAAIVCLIAVGAIL 180
TGYARFWWPGLPIWVPALVTVALILAVNLFSVRHFGELEFWFALIKVAAIVCLIAVGAIL
Sbjct 121 TGYARFWWPGLPIWVPALVTVALILAVNLFSVRHFGELEFWFALIKVAAIVCLIAVGAIL 180
Query 181 VATNFVSPHGVHATIENLWNDNGFFPTGFLGVVSGFQIAFFAYIGVELVGTAAAETADPR 240
VATNFVSPHGVHATIENLWNDNGFFPTGFLGVVSGFQIAFFAYIGVELVGTAAAETADPR
Sbjct 181 VATNFVSPHGVHATIENLWNDNGFFPTGFLGVVSGFQIAFFAYIGVELVGTAAAETADPR 240
Query 241 RTLPRAINAVPLRVAVFYIGALLAILAVVPWRQFASGESPFVTMFSLAGLAAAASVVNFV 300
RTLPRAINAVPLRVAVFYIGALLAILAVVPWRQFASGESPFVTMFSLAGLAAAASVVNFV
Sbjct 241 RTLPRAINAVPLRVAVFYIGALLAILAVVPWRQFASGESPFVTMFSLAGLAAAASVVNFV 300
Query 301 VVTAAASSANSGFFSTGRMLFGLADEGHAPAAFHQLNRGGVPAPALLLTAPLLLTSIPLL 360
VVTAAASSANSGFFSTGRMLFGLADEGHAPAAFHQLNRGGVPAPALLLTAPLLLTSIPLL
Sbjct 301 VVTAAASSANSGFFSTGRMLFGLADEGHAPAAFHQLNRGGVPAPALLLTAPLLLTSIPLL 360
Query 361 YAGRSVIGAFTLVTTVSSLLFMFVWAMIIISYLVYRRRHPQRHTDSVYKMPGGVVMCWAV 420
YAGRSVIGAFTLVTTVSSLLFMFVWAMIIISYLVYRRRHPQRHTDSVYKMPGGVVMCWAV
Sbjct 361 YAGRSVIGAFTLVTTVSSLLFMFVWAMIIISYLVYRRRHPQRHTDSVYKMPGGVVMCWAV 420
Query 421 LVFFAFVIWTLTTETETATALAWFPLWFVLLAVGWLVTQRRQSRRSFGFHCQVVGVRQQL 480
LVFFAFVIWTLTTETETATALAWFPLWFVLLAVGWLVTQRRQSRRSFGFHCQVVGVRQQL
Sbjct 421 LVFFAFVIWTLTTETETATALAWFPLWFVLLAVGWLVTQRRQSRRSFGFHCQVVGVRQQL 480
Query 481 GRGMARLAMKIHARPKLRSAVVVEPVSAGEPGARRSAKSVRKLASDDSQSAHCPVAVVGL 540
GRGMARLAMKIHARPKLRSAVVVEPVSAGEPGARRSAKSVRKLASDDSQSAHCPVAVVGL
Sbjct 481 GRGMARLAMKIHARPKLRSAVVVEPVSAGEPGARRSAKSVRKLASDDSQSAHCPVAVVGL 540
Query 541 ADGGRDPQYHHDGPDR 556
ADGGRDPQYHHDGPDR
Sbjct 541 ADGGRDPQYHHDGPDR 556
>gi|15841162|ref|NP_336199.1| amino acid permease [Mycobacterium tuberculosis CDC1551]
gi|31792890|ref|NP_855383.1| D-serine/alanine/glycine transporter protein CycA [Mycobacterium
bovis AF2122/97]
gi|148822910|ref|YP_001287664.1| D-serine/alanine/glycine transporter protein cycA [Mycobacterium
tuberculosis F11]
60 more sequence titles
Length=556
Score = 1105 bits (2857), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 555/556 (99%), Positives = 555/556 (99%), Gaps = 0/556 (0%)
Query 1 MPDDIAAADPTDTQPHLRRDLANRHIQLIAIGGAIGTGLFMGSGRTISLAGPAVMVVYGI 60
MPDDIAAADPTDTQPHLRRDLANRHIQLIAIGGAIGTGLFMGSGRTISLAGPAVMVVYGI
Sbjct 1 MPDDIAAADPTDTQPHLRRDLANRHIQLIAIGGAIGTGLFMGSGRTISLAGPAVMVVYGI 60
Query 61 IGFFVFFVLRAMGELLLSNLNYKSFVDFAADLRGPAAGFFVGWSYWFAWVVTGIADLVAI 120
IGFFVFFVLRAMGELLLSNLNYKSFVDFAADL GPAAGFFVGWSYWFAWVVTGIADLVAI
Sbjct 61 IGFFVFFVLRAMGELLLSNLNYKSFVDFAADLLGPAAGFFVGWSYWFAWVVTGIADLVAI 120
Query 121 TGYARFWWPGLPIWVPALVTVALILAVNLFSVRHFGELEFWFALIKVAAIVCLIAVGAIL 180
TGYARFWWPGLPIWVPALVTVALILAVNLFSVRHFGELEFWFALIKVAAIVCLIAVGAIL
Sbjct 121 TGYARFWWPGLPIWVPALVTVALILAVNLFSVRHFGELEFWFALIKVAAIVCLIAVGAIL 180
Query 181 VATNFVSPHGVHATIENLWNDNGFFPTGFLGVVSGFQIAFFAYIGVELVGTAAAETADPR 240
VATNFVSPHGVHATIENLWNDNGFFPTGFLGVVSGFQIAFFAYIGVELVGTAAAETADPR
Sbjct 181 VATNFVSPHGVHATIENLWNDNGFFPTGFLGVVSGFQIAFFAYIGVELVGTAAAETADPR 240
Query 241 RTLPRAINAVPLRVAVFYIGALLAILAVVPWRQFASGESPFVTMFSLAGLAAAASVVNFV 300
RTLPRAINAVPLRVAVFYIGALLAILAVVPWRQFASGESPFVTMFSLAGLAAAASVVNFV
Sbjct 241 RTLPRAINAVPLRVAVFYIGALLAILAVVPWRQFASGESPFVTMFSLAGLAAAASVVNFV 300
Query 301 VVTAAASSANSGFFSTGRMLFGLADEGHAPAAFHQLNRGGVPAPALLLTAPLLLTSIPLL 360
VVTAAASSANSGFFSTGRMLFGLADEGHAPAAFHQLNRGGVPAPALLLTAPLLLTSIPLL
Sbjct 301 VVTAAASSANSGFFSTGRMLFGLADEGHAPAAFHQLNRGGVPAPALLLTAPLLLTSIPLL 360
Query 361 YAGRSVIGAFTLVTTVSSLLFMFVWAMIIISYLVYRRRHPQRHTDSVYKMPGGVVMCWAV 420
YAGRSVIGAFTLVTTVSSLLFMFVWAMIIISYLVYRRRHPQRHTDSVYKMPGGVVMCWAV
Sbjct 361 YAGRSVIGAFTLVTTVSSLLFMFVWAMIIISYLVYRRRHPQRHTDSVYKMPGGVVMCWAV 420
Query 421 LVFFAFVIWTLTTETETATALAWFPLWFVLLAVGWLVTQRRQSRRSFGFHCQVVGVRQQL 480
LVFFAFVIWTLTTETETATALAWFPLWFVLLAVGWLVTQRRQSRRSFGFHCQVVGVRQQL
Sbjct 421 LVFFAFVIWTLTTETETATALAWFPLWFVLLAVGWLVTQRRQSRRSFGFHCQVVGVRQQL 480
Query 481 GRGMARLAMKIHARPKLRSAVVVEPVSAGEPGARRSAKSVRKLASDDSQSAHCPVAVVGL 540
GRGMARLAMKIHARPKLRSAVVVEPVSAGEPGARRSAKSVRKLASDDSQSAHCPVAVVGL
Sbjct 481 GRGMARLAMKIHARPKLRSAVVVEPVSAGEPGARRSAKSVRKLASDDSQSAHCPVAVVGL 540
Query 541 ADGGRDPQYHHDGPDR 556
ADGGRDPQYHHDGPDR
Sbjct 541 ADGGRDPQYHHDGPDR 556
>gi|340626710|ref|YP_004745162.1| putative D-serine/alanine/glycine transporter protein CYCA [Mycobacterium
canettii CIPT 140010059]
gi|340004900|emb|CCC44046.1| putative D-serine/alanine/glycine transporter protein CYCA [Mycobacterium
canettii CIPT 140010059]
Length=556
Score = 1103 bits (2854), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 554/556 (99%), Positives = 555/556 (99%), Gaps = 0/556 (0%)
Query 1 MPDDIAAADPTDTQPHLRRDLANRHIQLIAIGGAIGTGLFMGSGRTISLAGPAVMVVYGI 60
MPDDIAAADPTDTQPHLRRDLANRHIQLIAIGGAIGTGLFMGSGRTISLAGPAVMVVYGI
Sbjct 1 MPDDIAAADPTDTQPHLRRDLANRHIQLIAIGGAIGTGLFMGSGRTISLAGPAVMVVYGI 60
Query 61 IGFFVFFVLRAMGELLLSNLNYKSFVDFAADLRGPAAGFFVGWSYWFAWVVTGIADLVAI 120
IGFFVFFVLRAMGELLLSNLNYKSFVDFAADL GPAAGFFVGWSYWFAWVVTGIADLVAI
Sbjct 61 IGFFVFFVLRAMGELLLSNLNYKSFVDFAADLLGPAAGFFVGWSYWFAWVVTGIADLVAI 120
Query 121 TGYARFWWPGLPIWVPALVTVALILAVNLFSVRHFGELEFWFALIKVAAIVCLIAVGAIL 180
TGYARFWWPGLPIWVPALVTVALILAVNLFSVRHFGELEFWFALIKVAAIVCLIAVGAIL
Sbjct 121 TGYARFWWPGLPIWVPALVTVALILAVNLFSVRHFGELEFWFALIKVAAIVCLIAVGAIL 180
Query 181 VATNFVSPHGVHATIENLWNDNGFFPTGFLGVVSGFQIAFFAYIGVELVGTAAAETADPR 240
VATNFVSPHGVHATIENLWNDNGFFPTGFLGVVSGFQIAFFAYIGVELVGTAAAETADPR
Sbjct 181 VATNFVSPHGVHATIENLWNDNGFFPTGFLGVVSGFQIAFFAYIGVELVGTAAAETADPR 240
Query 241 RTLPRAINAVPLRVAVFYIGALLAILAVVPWRQFASGESPFVTMFSLAGLAAAASVVNFV 300
RTLPRAINAVPLRVAVFYIGALLAILAVVPWRQFASGESPFVTMFSLAGLAAAASVVNFV
Sbjct 241 RTLPRAINAVPLRVAVFYIGALLAILAVVPWRQFASGESPFVTMFSLAGLAAAASVVNFV 300
Query 301 VVTAAASSANSGFFSTGRMLFGLADEGHAPAAFHQLNRGGVPAPALLLTAPLLLTSIPLL 360
VVTAAASSANSGFFSTGRMLFGLADEGHAPAAFHQLNRGGVPAPALLLTAPLLLTSIPLL
Sbjct 301 VVTAAASSANSGFFSTGRMLFGLADEGHAPAAFHQLNRGGVPAPALLLTAPLLLTSIPLL 360
Query 361 YAGRSVIGAFTLVTTVSSLLFMFVWAMIIISYLVYRRRHPQRHTDSVYKMPGGVVMCWAV 420
YAGRSVIGAFTLVTTVSSLLFMFVWAMIIISYLVYRRRHPQRHTDSVYKMPGGVVMCWAV
Sbjct 361 YAGRSVIGAFTLVTTVSSLLFMFVWAMIIISYLVYRRRHPQRHTDSVYKMPGGVVMCWAV 420
Query 421 LVFFAFVIWTLTTETETATALAWFPLWFVLLAVGWLVTQRRQSRRSFGFHCQVVGVRQQL 480
LVFFAFVIWTLTTETETATALAWFPLWFVLLA+GWLVTQRRQSRRSFGFHCQVVGVRQQL
Sbjct 421 LVFFAFVIWTLTTETETATALAWFPLWFVLLAMGWLVTQRRQSRRSFGFHCQVVGVRQQL 480
Query 481 GRGMARLAMKIHARPKLRSAVVVEPVSAGEPGARRSAKSVRKLASDDSQSAHCPVAVVGL 540
GRGMARLAMKIHARPKLRSAVVVEPVSAGEPGARRSAKSVRKLASDDSQSAHCPVAVVGL
Sbjct 481 GRGMARLAMKIHARPKLRSAVVVEPVSAGEPGARRSAKSVRKLASDDSQSAHCPVAVVGL 540
Query 541 ADGGRDPQYHHDGPDR 556
ADGGRDPQYHHDGPDR
Sbjct 541 ADGGRDPQYHHDGPDR 556
>gi|339298291|gb|AEJ50401.1| amino acid permease [Mycobacterium tuberculosis CCDC5180]
Length=556
Score = 1103 bits (2852), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 554/556 (99%), Positives = 554/556 (99%), Gaps = 0/556 (0%)
Query 1 MPDDIAAADPTDTQPHLRRDLANRHIQLIAIGGAIGTGLFMGSGRTISLAGPAVMVVYGI 60
MPDDIAAADPTDTQPHLRRDLANRHIQLIAIGGAIGTGLFMGSGRTISLAGPAVMVVYGI
Sbjct 1 MPDDIAAADPTDTQPHLRRDLANRHIQLIAIGGAIGTGLFMGSGRTISLAGPAVMVVYGI 60
Query 61 IGFFVFFVLRAMGELLLSNLNYKSFVDFAADLRGPAAGFFVGWSYWFAWVVTGIADLVAI 120
IGFFVFFVLRAMGELLLSNLNYKSFVDFAADL GPAAGFFVGWSYWFAWVVTGIADLVAI
Sbjct 61 IGFFVFFVLRAMGELLLSNLNYKSFVDFAADLLGPAAGFFVGWSYWFAWVVTGIADLVAI 120
Query 121 TGYARFWWPGLPIWVPALVTVALILAVNLFSVRHFGELEFWFALIKVAAIVCLIAVGAIL 180
TGYARFWWPGLPIWVPALVTVALILAVNLFSVRHFGELEFWFALIKVAAIVCLIAVGAIL
Sbjct 121 TGYARFWWPGLPIWVPALVTVALILAVNLFSVRHFGELEFWFALIKVAAIVCLIAVGAIL 180
Query 181 VATNFVSPHGVHATIENLWNDNGFFPTGFLGVVSGFQIAFFAYIGVELVGTAAAETADPR 240
VATNFVSPHGVHATIENLWNDNGFFPTGFLGVVSGFQIAFFAYIGVELVGTAAAETADPR
Sbjct 181 VATNFVSPHGVHATIENLWNDNGFFPTGFLGVVSGFQIAFFAYIGVELVGTAAAETADPR 240
Query 241 RTLPRAINAVPLRVAVFYIGALLAILAVVPWRQFASGESPFVTMFSLAGLAAAASVVNFV 300
RTLPRAINAVPLRVAVFYIGALLAILAVVPWRQFASGESPFVTMFSLAGLAAAASVVNFV
Sbjct 241 RTLPRAINAVPLRVAVFYIGALLAILAVVPWRQFASGESPFVTMFSLAGLAAAASVVNFV 300
Query 301 VVTAAASSANSGFFSTGRMLFGLADEGHAPAAFHQLNRGGVPAPALLLTAPLLLTSIPLL 360
VVTAAASSANSGFFSTGR LFGLADEGHAPAAFHQLNRGGVPAPALLLTAPLLLTSIPLL
Sbjct 301 VVTAAASSANSGFFSTGRTLFGLADEGHAPAAFHQLNRGGVPAPALLLTAPLLLTSIPLL 360
Query 361 YAGRSVIGAFTLVTTVSSLLFMFVWAMIIISYLVYRRRHPQRHTDSVYKMPGGVVMCWAV 420
YAGRSVIGAFTLVTTVSSLLFMFVWAMIIISYLVYRRRHPQRHTDSVYKMPGGVVMCWAV
Sbjct 361 YAGRSVIGAFTLVTTVSSLLFMFVWAMIIISYLVYRRRHPQRHTDSVYKMPGGVVMCWAV 420
Query 421 LVFFAFVIWTLTTETETATALAWFPLWFVLLAVGWLVTQRRQSRRSFGFHCQVVGVRQQL 480
LVFFAFVIWTLTTETETATALAWFPLWFVLLAVGWLVTQRRQSRRSFGFHCQVVGVRQQL
Sbjct 421 LVFFAFVIWTLTTETETATALAWFPLWFVLLAVGWLVTQRRQSRRSFGFHCQVVGVRQQL 480
Query 481 GRGMARLAMKIHARPKLRSAVVVEPVSAGEPGARRSAKSVRKLASDDSQSAHCPVAVVGL 540
GRGMARLAMKIHARPKLRSAVVVEPVSAGEPGARRSAKSVRKLASDDSQSAHCPVAVVGL
Sbjct 481 GRGMARLAMKIHARPKLRSAVVVEPVSAGEPGARRSAKSVRKLASDDSQSAHCPVAVVGL 540
Query 541 ADGGRDPQYHHDGPDR 556
ADGGRDPQYHHDGPDR
Sbjct 541 ADGGRDPQYHHDGPDR 556
>gi|339294659|gb|AEJ46770.1| amino acid permease [Mycobacterium tuberculosis CCDC5079]
Length=556
Score = 1102 bits (2851), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 554/556 (99%), Positives = 554/556 (99%), Gaps = 0/556 (0%)
Query 1 MPDDIAAADPTDTQPHLRRDLANRHIQLIAIGGAIGTGLFMGSGRTISLAGPAVMVVYGI 60
MPDDIAAADPTDTQPHLRRDLANRHIQLIAIGGAIGTGLFMGSGRTISLAGPAVMVVYGI
Sbjct 1 MPDDIAAADPTDTQPHLRRDLANRHIQLIAIGGAIGTGLFMGSGRTISLAGPAVMVVYGI 60
Query 61 IGFFVFFVLRAMGELLLSNLNYKSFVDFAADLRGPAAGFFVGWSYWFAWVVTGIADLVAI 120
IGFFVFFVLRAMGELLLSNLNYKSFVDFAADL GPAAGFFVGWSYWFAWVVTGIADLVAI
Sbjct 61 IGFFVFFVLRAMGELLLSNLNYKSFVDFAADLLGPAAGFFVGWSYWFAWVVTGIADLVAI 120
Query 121 TGYARFWWPGLPIWVPALVTVALILAVNLFSVRHFGELEFWFALIKVAAIVCLIAVGAIL 180
TGYARFWWPGLPIWVP LVTVALILAVNLFSVRHFGELEFWFALIKVAAIVCLIAVGAIL
Sbjct 121 TGYARFWWPGLPIWVPGLVTVALILAVNLFSVRHFGELEFWFALIKVAAIVCLIAVGAIL 180
Query 181 VATNFVSPHGVHATIENLWNDNGFFPTGFLGVVSGFQIAFFAYIGVELVGTAAAETADPR 240
VATNFVSPHGVHATIENLWNDNGFFPTGFLGVVSGFQIAFFAYIGVELVGTAAAETADPR
Sbjct 181 VATNFVSPHGVHATIENLWNDNGFFPTGFLGVVSGFQIAFFAYIGVELVGTAAAETADPR 240
Query 241 RTLPRAINAVPLRVAVFYIGALLAILAVVPWRQFASGESPFVTMFSLAGLAAAASVVNFV 300
RTLPRAINAVPLRVAVFYIGALLAILAVVPWRQFASGESPFVTMFSLAGLAAAASVVNFV
Sbjct 241 RTLPRAINAVPLRVAVFYIGALLAILAVVPWRQFASGESPFVTMFSLAGLAAAASVVNFV 300
Query 301 VVTAAASSANSGFFSTGRMLFGLADEGHAPAAFHQLNRGGVPAPALLLTAPLLLTSIPLL 360
VVTAAASSANSGFFSTGRMLFGLADEGHAPAAFHQLNRGGVPAPALLLTAPLLLTSIPLL
Sbjct 301 VVTAAASSANSGFFSTGRMLFGLADEGHAPAAFHQLNRGGVPAPALLLTAPLLLTSIPLL 360
Query 361 YAGRSVIGAFTLVTTVSSLLFMFVWAMIIISYLVYRRRHPQRHTDSVYKMPGGVVMCWAV 420
YAGRSVIGAFTLVTTVSSLLFMFVWAMIIISYLVYRRRHPQRHTDSVYKMPGGVVMCWAV
Sbjct 361 YAGRSVIGAFTLVTTVSSLLFMFVWAMIIISYLVYRRRHPQRHTDSVYKMPGGVVMCWAV 420
Query 421 LVFFAFVIWTLTTETETATALAWFPLWFVLLAVGWLVTQRRQSRRSFGFHCQVVGVRQQL 480
LVFFAFVIWTLTTETETATALAWFPLWFVLLAVGWLVTQRRQSRRSFGFHCQVVGVRQQL
Sbjct 421 LVFFAFVIWTLTTETETATALAWFPLWFVLLAVGWLVTQRRQSRRSFGFHCQVVGVRQQL 480
Query 481 GRGMARLAMKIHARPKLRSAVVVEPVSAGEPGARRSAKSVRKLASDDSQSAHCPVAVVGL 540
GRGMARLAMKIHARPKLRSAVVVEPVSAGEPGARRSAKSVRKLASDDSQSAHCPVAVVGL
Sbjct 481 GRGMARLAMKIHARPKLRSAVVVEPVSAGEPGARRSAKSVRKLASDDSQSAHCPVAVVGL 540
Query 541 ADGGRDPQYHHDGPDR 556
ADGGRDPQYHHDGPDR
Sbjct 541 ADGGRDPQYHHDGPDR 556
>gi|121637611|ref|YP_977834.1| putative D-serine/alanine/glycine transporter protein cycA [Mycobacterium
bovis BCG str. Pasteur 1173P2]
gi|224990086|ref|YP_002644773.1| putative D-serine/alanine/glycine transporter protein [Mycobacterium
bovis BCG str. Tokyo 172]
gi|121493258|emb|CAL71729.1| Probable D-serine/alanine/glycine transporter protein cycA [Mycobacterium
bovis BCG str. Pasteur 1173P2]
gi|224773199|dbj|BAH26005.1| putative D-serine/alanine/glycine transporter protein [Mycobacterium
bovis BCG str. Tokyo 172]
gi|341601629|emb|CCC64302.1| probable D-serine/alanine/glycine transporter protein cycA [Mycobacterium
bovis BCG str. Moreau RDJ]
Length=556
Score = 1102 bits (2850), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 554/556 (99%), Positives = 554/556 (99%), Gaps = 0/556 (0%)
Query 1 MPDDIAAADPTDTQPHLRRDLANRHIQLIAIGGAIGTGLFMGSGRTISLAGPAVMVVYGI 60
MPDDIAAADPTDTQPHLRRDLANRHIQLIAIGGAIGTGLFMGSGRTISLAGPAVMVVYGI
Sbjct 1 MPDDIAAADPTDTQPHLRRDLANRHIQLIAIGGAIGTGLFMGSGRTISLAGPAVMVVYGI 60
Query 61 IGFFVFFVLRAMGELLLSNLNYKSFVDFAADLRGPAAGFFVGWSYWFAWVVTGIADLVAI 120
IGFFVFFVLRAMGELLLSNLNYKSFVDFAADL GPAAGFFVGWSYWFAWVVTGIADLVAI
Sbjct 61 IGFFVFFVLRAMGELLLSNLNYKSFVDFAADLLGPAAGFFVGWSYWFAWVVTGIADLVAI 120
Query 121 TGYARFWWPGLPIWVPALVTVALILAVNLFSVRHFGELEFWFALIKVAAIVCLIAVGAIL 180
T YARFWWPGLPIWVPALVTVALILAVNLFSVRHFGELEFWFALIKVAAIVCLIAVGAIL
Sbjct 121 TSYARFWWPGLPIWVPALVTVALILAVNLFSVRHFGELEFWFALIKVAAIVCLIAVGAIL 180
Query 181 VATNFVSPHGVHATIENLWNDNGFFPTGFLGVVSGFQIAFFAYIGVELVGTAAAETADPR 240
VATNFVSPHGVHATIENLWNDNGFFPTGFLGVVSGFQIAFFAYIGVELVGTAAAETADPR
Sbjct 181 VATNFVSPHGVHATIENLWNDNGFFPTGFLGVVSGFQIAFFAYIGVELVGTAAAETADPR 240
Query 241 RTLPRAINAVPLRVAVFYIGALLAILAVVPWRQFASGESPFVTMFSLAGLAAAASVVNFV 300
RTLPRAINAVPLRVAVFYIGALLAILAVVPWRQFASGESPFVTMFSLAGLAAAASVVNFV
Sbjct 241 RTLPRAINAVPLRVAVFYIGALLAILAVVPWRQFASGESPFVTMFSLAGLAAAASVVNFV 300
Query 301 VVTAAASSANSGFFSTGRMLFGLADEGHAPAAFHQLNRGGVPAPALLLTAPLLLTSIPLL 360
VVTAAASSANSGFFSTGRMLFGLADEGHAPAAFHQLNRGGVPAPALLLTAPLLLTSIPLL
Sbjct 301 VVTAAASSANSGFFSTGRMLFGLADEGHAPAAFHQLNRGGVPAPALLLTAPLLLTSIPLL 360
Query 361 YAGRSVIGAFTLVTTVSSLLFMFVWAMIIISYLVYRRRHPQRHTDSVYKMPGGVVMCWAV 420
YAGRSVIGAFTLVTTVSSLLFMFVWAMIIISYLVYRRRHPQRHTDSVYKMPGGVVMCWAV
Sbjct 361 YAGRSVIGAFTLVTTVSSLLFMFVWAMIIISYLVYRRRHPQRHTDSVYKMPGGVVMCWAV 420
Query 421 LVFFAFVIWTLTTETETATALAWFPLWFVLLAVGWLVTQRRQSRRSFGFHCQVVGVRQQL 480
LVFFAFVIWTLTTETETATALAWFPLWFVLLAVGWLVTQRRQSRRSFGFHCQVVGVRQQL
Sbjct 421 LVFFAFVIWTLTTETETATALAWFPLWFVLLAVGWLVTQRRQSRRSFGFHCQVVGVRQQL 480
Query 481 GRGMARLAMKIHARPKLRSAVVVEPVSAGEPGARRSAKSVRKLASDDSQSAHCPVAVVGL 540
GRGMARLAMKIHARPKLRSAVVVEPVSAGEPGARRSAKSVRKLASDDSQSAHCPVAVVGL
Sbjct 481 GRGMARLAMKIHARPKLRSAVVVEPVSAGEPGARRSAKSVRKLASDDSQSAHCPVAVVGL 540
Query 541 ADGGRDPQYHHDGPDR 556
ADGGRDPQYHHDGPDR
Sbjct 541 ADGGRDPQYHHDGPDR 556
>gi|254364543|ref|ZP_04980589.1| D-serine/alanine/glycine transporter protein cycA [Mycobacterium
tuberculosis str. Haarlem]
gi|134150057|gb|EBA42102.1| D-serine/alanine/glycine transporter protein cycA [Mycobacterium
tuberculosis str. Haarlem]
Length=556
Score = 1102 bits (2849), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 554/556 (99%), Positives = 554/556 (99%), Gaps = 0/556 (0%)
Query 1 MPDDIAAADPTDTQPHLRRDLANRHIQLIAIGGAIGTGLFMGSGRTISLAGPAVMVVYGI 60
MPDDIAAADPTDTQPHLRRDLANRHIQLIAIGGAIGTGLFMGSGRTISLAGPAVMVVYGI
Sbjct 1 MPDDIAAADPTDTQPHLRRDLANRHIQLIAIGGAIGTGLFMGSGRTISLAGPAVMVVYGI 60
Query 61 IGFFVFFVLRAMGELLLSNLNYKSFVDFAADLRGPAAGFFVGWSYWFAWVVTGIADLVAI 120
IGFFVFFVLRAMGELLLSNLNYKSFVDFAADL GPAAGFFVGWSYWFAWVVTGIADLVAI
Sbjct 61 IGFFVFFVLRAMGELLLSNLNYKSFVDFAADLLGPAAGFFVGWSYWFAWVVTGIADLVAI 120
Query 121 TGYARFWWPGLPIWVPALVTVALILAVNLFSVRHFGELEFWFALIKVAAIVCLIAVGAIL 180
TGYARFWWPGLPIWVPALVTVALILAVNLFSVRHFGELEFWFALIKVAAIVCLIAVGAIL
Sbjct 121 TGYARFWWPGLPIWVPALVTVALILAVNLFSVRHFGELEFWFALIKVAAIVCLIAVGAIL 180
Query 181 VATNFVSPHGVHATIENLWNDNGFFPTGFLGVVSGFQIAFFAYIGVELVGTAAAETADPR 240
VATNFVSPHGVHATIENLWNDNGFFPTGFLGVVSGFQIAFFAYIGVELVGTAAAETADPR
Sbjct 181 VATNFVSPHGVHATIENLWNDNGFFPTGFLGVVSGFQIAFFAYIGVELVGTAAAETADPR 240
Query 241 RTLPRAINAVPLRVAVFYIGALLAILAVVPWRQFASGESPFVTMFSLAGLAAAASVVNFV 300
RTLPRAINAVPLRVAVFYIGALLAILAVVPWRQFASGESPFVTMFSLAGLAAAASVVNFV
Sbjct 241 RTLPRAINAVPLRVAVFYIGALLAILAVVPWRQFASGESPFVTMFSLAGLAAAASVVNFV 300
Query 301 VVTAAASSANSGFFSTGRMLFGLADEGHAPAAFHQLNRGGVPAPALLLTAPLLLTSIPLL 360
VVTAAASSANSGFFSTGRMLFGLADEGHAPAAFHQLNRGGVPAPALLLTAPLLLTSIPLL
Sbjct 301 VVTAAASSANSGFFSTGRMLFGLADEGHAPAAFHQLNRGGVPAPALLLTAPLLLTSIPLL 360
Query 361 YAGRSVIGAFTLVTTVSSLLFMFVWAMIIISYLVYRRRHPQRHTDSVYKMPGGVVMCWAV 420
YAGRSVIGAFTLVTTVSSLLFMFVWAMIIISYLVYRRRHPQRHTDSVYKMPGGVVMCWAV
Sbjct 361 YAGRSVIGAFTLVTTVSSLLFMFVWAMIIISYLVYRRRHPQRHTDSVYKMPGGVVMCWAV 420
Query 421 LVFFAFVIWTLTTETETATALAWFPLWFVLLAVGWLVTQRRQSRRSFGFHCQVVGVRQQL 480
LVFFAFVIWTLTTETETATALAWFPLWFVLLAVGWLVTQRRQSRRSFGFHCQVVGV QQL
Sbjct 421 LVFFAFVIWTLTTETETATALAWFPLWFVLLAVGWLVTQRRQSRRSFGFHCQVVGVGQQL 480
Query 481 GRGMARLAMKIHARPKLRSAVVVEPVSAGEPGARRSAKSVRKLASDDSQSAHCPVAVVGL 540
GRGMARLAMKIHARPKLRSAVVVEPVSAGEPGARRSAKSVRKLASDDSQSAHCPVAVVGL
Sbjct 481 GRGMARLAMKIHARPKLRSAVVVEPVSAGEPGARRSAKSVRKLASDDSQSAHCPVAVVGL 540
Query 541 ADGGRDPQYHHDGPDR 556
ADGGRDPQYHHDGPDR
Sbjct 541 ADGGRDPQYHHDGPDR 556
>gi|289443161|ref|ZP_06432905.1| D-serine/alanine/glycine transporter cycA [Mycobacterium tuberculosis
T46]
gi|289416080|gb|EFD13320.1| D-serine/alanine/glycine transporter cycA [Mycobacterium tuberculosis
T46]
Length=391
Score = 759 bits (1960), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/391 (99%), Positives = 390/391 (99%), Gaps = 0/391 (0%)
Query 1 MPDDIAAADPTDTQPHLRRDLANRHIQLIAIGGAIGTGLFMGSGRTISLAGPAVMVVYGI 60
MPDDIAAADPTDTQPHLRRDLANRHIQLIAIGGAIGTGLFMGSGRTISLAGPAVMVVYGI
Sbjct 1 MPDDIAAADPTDTQPHLRRDLANRHIQLIAIGGAIGTGLFMGSGRTISLAGPAVMVVYGI 60
Query 61 IGFFVFFVLRAMGELLLSNLNYKSFVDFAADLRGPAAGFFVGWSYWFAWVVTGIADLVAI 120
IGFFVFFVLRAMGELLLSNLNYKSFVDFAADL GPAAGFFVGWSYWFAWVVTGIADLVAI
Sbjct 61 IGFFVFFVLRAMGELLLSNLNYKSFVDFAADLLGPAAGFFVGWSYWFAWVVTGIADLVAI 120
Query 121 TGYARFWWPGLPIWVPALVTVALILAVNLFSVRHFGELEFWFALIKVAAIVCLIAVGAIL 180
TGYARFWWPGLPIWVPALVTVALILAVNLFSVRHFGELEFWFALIKVAAIVCLIAVGAIL
Sbjct 121 TGYARFWWPGLPIWVPALVTVALILAVNLFSVRHFGELEFWFALIKVAAIVCLIAVGAIL 180
Query 181 VATNFVSPHGVHATIENLWNDNGFFPTGFLGVVSGFQIAFFAYIGVELVGTAAAETADPR 240
VATNFVSPHGVHATIENLWNDNGFFPTGFLGVVSGFQIAFFAYIGVELVGTAAAETADPR
Sbjct 181 VATNFVSPHGVHATIENLWNDNGFFPTGFLGVVSGFQIAFFAYIGVELVGTAAAETADPR 240
Query 241 RTLPRAINAVPLRVAVFYIGALLAILAVVPWRQFASGESPFVTMFSLAGLAAAASVVNFV 300
RTLPRAINAVPLRVAVFYIGALLAILAVVPWRQFASGESPFVTMFSLAGLAAAASVVNFV
Sbjct 241 RTLPRAINAVPLRVAVFYIGALLAILAVVPWRQFASGESPFVTMFSLAGLAAAASVVNFV 300
Query 301 VVTAAASSANSGFFSTGRMLFGLADEGHAPAAFHQLNRGGVPAPALLLTAPLLLTSIPLL 360
VVTAAASSANSGFFSTGRMLFGLADEGHAPAAFHQLNRGGVPAPALLLTAPLLLTSIPLL
Sbjct 301 VVTAAASSANSGFFSTGRMLFGLADEGHAPAAFHQLNRGGVPAPALLLTAPLLLTSIPLL 360
Query 361 YAGRSVIGAFTLVTTVSSLLFMFVWAMIIIS 391
YAGRSVIGAFTLVTTVSSLLFMFVWAMIIIS
Sbjct 361 YAGRSVIGAFTLVTTVSSLLFMFVWAMIIIS 391
>gi|240170164|ref|ZP_04748823.1| D-serine/alanine/glycine transporter protein cycA [Mycobacterium
kansasii ATCC 12478]
Length=468
Score = 716 bits (1849), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/455 (82%), Positives = 405/455 (90%), Gaps = 1/455 (0%)
Query 14 QPHLRRDLANRHIQLIAIGGAIGTGLFMGSGRTISLAGPAVMVVYGIIGFFVFFVLRAMG 73
PHL+R L+NRHIQLIAIGGAIGTGLFMGSGRTISLAGPAV+VVY IIGFFVFFVLRAMG
Sbjct 1 MPHLQRRLSNRHIQLIAIGGAIGTGLFMGSGRTISLAGPAVLVVYAIIGFFVFFVLRAMG 60
Query 74 ELLLSNLNYKSFVDFAADLRGPAAGFFVGWSYWFAWVVTGIADLVAITGYARFWWPGLPI 133
ELLLSNLNYKSFVDF ADL GPAA F++GWSYWFAWVVTGIADLVAITGYARFWWP P+
Sbjct 61 ELLLSNLNYKSFVDFTADLLGPAAAFYLGWSYWFAWVVTGIADLVAITGYARFWWPASPV 120
Query 134 WVPALVTVALILAVNLFSVRHFGELEFWFALIKVAAIVCLIAVGAILVATNFVSPHGVHA 193
W+PAL+TV LIL VNLFSV HFGE+EFW ALIKV AI+ LI +GA LV TNFVSP G A
Sbjct 121 WLPALLTVGLILTVNLFSVGHFGEMEFWLALIKVVAILSLILLGAFLVVTNFVSPQGDRA 180
Query 194 TIENLWNDNGFFPTGFLGVVSGFQIAFFAYIGVELVGTAAAETADPRRTLPRAINAVPLR 253
TIENLWND G FP GF+G+ SGFQIAFFAYIGVELVGTAA ETA+PRRT+PRAINAVP+R
Sbjct 181 TIENLWNDGGLFPQGFMGLASGFQIAFFAYIGVELVGTAAGETANPRRTIPRAINAVPVR 240
Query 254 VAVFYIGALLAILAVVPWRQFASGESPFVTMFSLAGLAAAASVVNFVVVTAAASSANSGF 313
VA+FY+GAL+AILAVVPWR+FASG+SPFVTMFSLAGLAAAASVVNFVV TAAASSANSG
Sbjct 241 VAIFYVGALVAILAVVPWRRFASGQSPFVTMFSLAGLAAAASVVNFVVTTAAASSANSGV 300
Query 314 FSTGRMLFGLADEGHAPAAFHQLNRGGVPAPALLLTAPLLLTSIPLLYAGRSVIGAFTLV 373
FSTGRMLFGLADEG APA F +LNRGGVPA A++ TAPLLLTSIPLLYAG SVIGAFTL+
Sbjct 301 FSTGRMLFGLADEGSAPAVFQRLNRGGVPASAIVFTAPLLLTSIPLLYAGGSVIGAFTLI 360
Query 374 TTVSSLLFMFVWAMIIISYLVYRRRHPQRHTDSVYKMPGGVVMCWAVLVFFAFVIWTLTT 433
TTV+SLLFMFVW I++SYLVYRRRHP+RH S+YKMPGGV MCWAVL FFAFVIWTLTT
Sbjct 361 TTVASLLFMFVWTTIVVSYLVYRRRHPRRHAGSIYKMPGGVSMCWAVLAFFAFVIWTLTT 420
Query 434 ETETATALAWFPLWFVLLAVGWLVTQRRQ-SRRSF 467
+TETA ALA PLWFV L GWL+ +RR S R F
Sbjct 421 KTETAVALALVPLWFVTLTGGWLMVRRRAVSVRGF 455
>gi|240171970|ref|ZP_04750629.1| D-serine/alanine/glycine transporter protein cycA [Mycobacterium
kansasii ATCC 12478]
Length=486
Score = 692 bits (1785), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/462 (81%), Positives = 410/462 (89%), Gaps = 0/462 (0%)
Query 3 DDIAAADPTDTQPHLRRDLANRHIQLIAIGGAIGTGLFMGSGRTISLAGPAVMVVYGIIG 62
D +A A+ L R LANRH+QLIAIGGAIGTGLFMGSGRTISLAGPAV+VVYGIIG
Sbjct 9 DPVATANAATDVAQLHRGLANRHVQLIAIGGAIGTGLFMGSGRTISLAGPAVVVVYGIIG 68
Query 63 FFVFFVLRAMGELLLSNLNYKSFVDFAADLRGPAAGFFVGWSYWFAWVVTGIADLVAITG 122
FFVFFVLRAMGELLLSNLNYKSFVD AADL GPAAGFF+GWSYWFAW+VTGIADLVAITG
Sbjct 69 FFVFFVLRAMGELLLSNLNYKSFVDCAADLLGPAAGFFMGWSYWFAWIVTGIADLVAITG 128
Query 123 YARFWWPGLPIWVPALVTVALILAVNLFSVRHFGELEFWFALIKVAAIVCLIAVGAILVA 182
Y++FWWP +P W+P ++TV+LIL NLFSV +FGE+EFWFALIK+AAI CLI V I+ A
Sbjct 129 YSKFWWPDIPAWLPVVITVSLILGCNLFSVSNFGEIEFWFALIKLAAIGCLIVVAVIMGA 188
Query 183 TNFVSPHGVHATIENLWNDNGFFPTGFLGVVSGFQIAFFAYIGVELVGTAAAETADPRRT 242
T++VSPHG A I NLWNDNGFF TGF+G+VSGFQIAFFAYIGVELVG AAAETADP RT
Sbjct 189 THYVSPHGAPAGIANLWNDNGFFATGFMGLVSGFQIAFFAYIGVELVGAAAAETADPTRT 248
Query 243 LPRAINAVPLRVAVFYIGALLAILAVVPWRQFASGESPFVTMFSLAGLAAAASVVNFVVV 302
LPRAI+AVP+RVA+FYIGALLAILAVVPWRQF+SG+SPFV MFSLAG+AAAASVVNFVV
Sbjct 249 LPRAIDAVPVRVAIFYIGALLAILAVVPWRQFSSGQSPFVMMFSLAGVAAAASVVNFVVA 308
Query 303 TAAASSANSGFFSTGRMLFGLADEGHAPAAFHQLNRGGVPAPALLLTAPLLLTSIPLLYA 362
T+A S+ANSG FSTGRMLFGLADEG APA F +LNRGGVPAPALLLTA LLL++IPLLYA
Sbjct 309 TSATSAANSGVFSTGRMLFGLADEGSAPAIFGKLNRGGVPAPALLLTAVLLLSAIPLLYA 368
Query 363 GRSVIGAFTLVTTVSSLLFMFVWAMIIISYLVYRRRHPQRHTDSVYKMPGGVVMCWAVLV 422
G SVIGAFTL+TT+SSLLFMFVWAMII+SYL YRRRHPQRH S Y+MPGGV+MCWAVL
Sbjct 369 GGSVIGAFTLITTMSSLLFMFVWAMIILSYLAYRRRHPQRHATSNYQMPGGVMMCWAVLA 428
Query 423 FFAFVIWTLTTETETATALAWFPLWFVLLAVGWLVTQRRQSR 464
FFAFVIWTLTT TET ALAWFPLW +LLAVGWLV +RR R
Sbjct 429 FFAFVIWTLTTNTETLVALAWFPLWLILLAVGWLVVRRRPGR 470
>gi|183981113|ref|YP_001849404.1| D-serine/D-alanine/glycine transporter, CycA [Mycobacterium marinum
M]
gi|183174439|gb|ACC39549.1| D-serine/D-alanine/glycine transporter, CycA [Mycobacterium marinum
M]
Length=491
Score = 677 bits (1748), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/461 (81%), Positives = 411/461 (90%), Gaps = 0/461 (0%)
Query 1 MPDDIAAADPTDTQPHLRRDLANRHIQLIAIGGAIGTGLFMGSGRTISLAGPAVMVVYGI 60
MP+D+A PT++ PHL R L+NRHIQLIAIGGAIGTGLFMGSGRTISLAGPAV+VVY +
Sbjct 1 MPEDVATCQPTESTPHLHRGLSNRHIQLIAIGGAIGTGLFMGSGRTISLAGPAVIVVYAV 60
Query 61 IGFFVFFVLRAMGELLLSNLNYKSFVDFAADLRGPAAGFFVGWSYWFAWVVTGIADLVAI 120
IGFFVFFVLRAMGELLLSNLNYKSFVD AADL GPAAG+F+GWSYWFAW+V GIADLVAI
Sbjct 61 IGFFVFFVLRAMGELLLSNLNYKSFVDCAADLLGPAAGYFMGWSYWFAWIVAGIADLVAI 120
Query 121 TGYARFWWPGLPIWVPALVTVALILAVNLFSVRHFGELEFWFALIKVAAIVCLIAVGAIL 180
TGY++FWWP +P W PALVT+A++L++N+F V FGE EFWFALIKVAAI+CLI VGAIL
Sbjct 121 TGYSKFWWPDVPTWAPALVTIAVMLSINMFGVSKFGETEFWFALIKVAAILCLITVGAIL 180
Query 181 VATNFVSPHGVHATIENLWNDNGFFPTGFLGVVSGFQIAFFAYIGVELVGTAAAETADPR 240
V T F SP G A + NLWND GFFPTGF+G+ SGFQIAFFAYIGVELVG AAAE ADP
Sbjct 181 VITGFTSPDGDRAALANLWNDGGFFPTGFVGLASGFQIAFFAYIGVELVGAAAAEAADPS 240
Query 241 RTLPRAINAVPLRVAVFYIGALLAILAVVPWRQFASGESPFVTMFSLAGLAAAASVVNFV 300
TLPRAINAVPLRVA+FYIGALLAIL+VVPWR+FASGESPFVTMF+LAGLAAAASVVNFV
Sbjct 241 HTLPRAINAVPLRVAIFYIGALLAILSVVPWRRFASGESPFVTMFALAGLAAAASVVNFV 300
Query 301 VVTAAASSANSGFFSTGRMLFGLADEGHAPAAFHQLNRGGVPAPALLLTAPLLLTSIPLL 360
V+T+AASSANSG FSTGRML+GLADEG AP F +LNR GVPAPAL+LTA LLL++IPLL
Sbjct 301 VITSAASSANSGVFSTGRMLYGLADEGSAPGIFGRLNRRGVPAPALILTAALLLSAIPLL 360
Query 361 YAGRSVIGAFTLVTTVSSLLFMFVWAMIIISYLVYRRRHPQRHTDSVYKMPGGVVMCWAV 420
YAG SVIGAFTL+TT+SSLLFMFVW MI+ISYLVYRRRH QRH DS YKMPGGVVMCWA+
Sbjct 361 YAGGSVIGAFTLITTISSLLFMFVWTMIVISYLVYRRRHAQRHADSAYKMPGGVVMCWAI 420
Query 421 LVFFAFVIWTLTTETETATALAWFPLWFVLLAVGWLVTQRR 461
L FF FVIWTLTTETETATAL WFPLWFV+L +GW + +RR
Sbjct 421 LGFFVFVIWTLTTETETATALVWFPLWFVILGIGWALVRRR 461
>gi|118616628|ref|YP_904960.1| D-serine/D-alanine/glycine transporter, CycA [Mycobacterium ulcerans
Agy99]
gi|118568738|gb|ABL03489.1| D-serine/D-alanine/glycine transporter, CycA [Mycobacterium ulcerans
Agy99]
Length=496
Score = 661 bits (1706), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/465 (78%), Positives = 404/465 (87%), Gaps = 4/465 (0%)
Query 1 MPDDIAAADPTDTQPHLRRDLANRHIQLIAIGGAIGTGLFMGSGRTISLAGPAVMVVYGI 60
MP+D+A T++ PHL R L+NRHIQLIAIGGAIGTGLFMGSGRTISLAGPAV+VVY +
Sbjct 2 MPEDVATCQHTESTPHLHRGLSNRHIQLIAIGGAIGTGLFMGSGRTISLAGPAVIVVYAV 61
Query 61 IGFFVFFVLRAMGELLLSNLNYKSFVDFAADLRGPAAGFFVGWSYWFAWVVTGIADLVAI 120
IGFFVFFVLRAMGELLLSNLNYKSFVD AADL GPAAG+F+GWSYWFAW+V GIADLVAI
Sbjct 62 IGFFVFFVLRAMGELLLSNLNYKSFVDCAADLLGPAAGYFMGWSYWFAWIVAGIADLVAI 121
Query 121 TGYARFWWPGLPIWVPALVTVALILAVNLFSVRHFGELEFWFALIKVAAIVCLIAVGAIL 180
TGY++FWWP +P W PALVT+A++L++N+F V FG EFWFALIKVAAI+CLI VGAIL
Sbjct 122 TGYSKFWWPDVPTWAPALVTIAVMLSINMFGVSKFGGTEFWFALIKVAAILCLITVGAIL 181
Query 181 VATNFVSPHGVHATIENLWNDNGFFPTGFLGVVSGFQIAFFAYIGVELVGTAAAETADPR 240
V T F SP G A + NLWND GFFPTGF+G+ SGFQIAFFAYIGVELVG AAAE ADP
Sbjct 182 VITGFTSPDGDRAALANLWNDGGFFPTGFVGLASGFQIAFFAYIGVELVGAAAAEAADPS 241
Query 241 RTLPRAINAVPLRVAVFYIGALLAILAVVPWRQFASGESPFVTMFSLAGLAAAASVVNFV 300
TLPRAINAVPLRVA+FYIGALLAIL+VVPWR+FASGESPFVTMF+LAGLAAAASVVNFV
Sbjct 242 HTLPRAINAVPLRVAIFYIGALLAILSVVPWRRFASGESPFVTMFALAGLAAAASVVNFV 301
Query 301 VVTAAASSANSGFFSTGRMLFGLADEGHAPAAFHQLNRGGVPAPALLLTAPLLLTSIPLL 360
V+T+AASSANSG FSTGRML+GLADEG AP F +LN GVPAPAL+LTA LLL++IPLL
Sbjct 302 VITSAASSANSGVFSTGRMLYGLADEGSAPGIFGRLNSRGVPAPALILTAALLLSAIPLL 361
Query 361 YAGRSVIGAFTLVTTVSSLLFMFVWAMIIISYLVYRRRHPQRHTDSVYKMPGGVVMCWAV 420
YAG SV GAFTL+TT+SSLLFMFVW MI+ISYLVYRRRH QRH DS YKMPGGVVMCWA+
Sbjct 362 YAGGSVTGAFTLITTISSLLFMFVWTMIVISYLVYRRRHAQRHADSAYKMPGGVVMCWAI 421
Query 421 LVFFAFVIW----TLTTETETATALAWFPLWFVLLAVGWLVTQRR 461
L FF FVIW TETETATAL WFPLWFV+L +GW + +RR
Sbjct 422 LGFFVFVIWTLTTETETETETATALVWFPLWFVILGIGWALVRRR 466
>gi|184200051|ref|YP_001854258.1| D-serine/D-alanine/glycine transporter [Kocuria rhizophila DC2201]
gi|183580281|dbj|BAG28752.1| D-serine/D-alanine/glycine transporter [Kocuria rhizophila DC2201]
Length=502
Score = 605 bits (1561), Expect = 5e-171, Method: Compositional matrix adjust.
Identities = 298/466 (64%), Positives = 366/466 (79%), Gaps = 0/466 (0%)
Query 1 MPDDIAAADPTDTQPHLRRDLANRHIQLIAIGGAIGTGLFMGSGRTISLAGPAVMVVYGI 60
M + A P R L+NRHIQLIAIGGAIGTGLFMGSGRTISLAGPAV++VY
Sbjct 17 MTNSSTAVSPPHAHSGPTRGLSNRHIQLIAIGGAIGTGLFMGSGRTISLAGPAVVLVYMA 76
Query 61 IGFFVFFVLRAMGELLLSNLNYKSFVDFAADLRGPAAGFFVGWSYWFAWVVTGIADLVAI 120
IGF +FFV+RAMGE+LLSNL+YK+F DFAADL GP AGFFVGWSYWF W+VT IA+LVAI
Sbjct 77 IGFVLFFVMRAMGEILLSNLHYKTFADFAADLIGPWAGFFVGWSYWFCWIVTAIAELVAI 136
Query 121 TGYARFWWPGLPIWVPALVTVALILAVNLFSVRHFGELEFWFALIKVAAIVCLIAVGAIL 180
TGY +FWWP +P+W+P + + ++ +N SV+ FGE+EFWFALIK+ AI+ LI VGA++
Sbjct 137 TGYVQFWWPSVPLWLPTVAVLVVVFLLNAVSVKSFGEMEFWFALIKIVAILALIVVGAVM 196
Query 181 VATNFVSPHGVHATIENLWNDNGFFPTGFLGVVSGFQIAFFAYIGVELVGTAAAETADPR 240
T+F SP G A + NLWND G+FP G +GVV+GFQIA FA++GVELVGT AAE DPR
Sbjct 197 AVTHFTSPDGNVAQVSNLWNDGGWFPHGAMGVVAGFQIAVFAFVGVELVGTTAAEARDPR 256
Query 241 RTLPRAINAVPLRVAVFYIGALLAILAVVPWRQFASGESPFVTMFSLAGLAAAASVVNFV 300
TLPRAIN+VPLR+ +FY+G+LLAIL V PWR +SPFV MFSLAGL AAASVVNFV
Sbjct 257 TTLPRAINSVPLRILIFYVGSLLAILVVTPWRSINPEQSPFVAMFSLAGLGAAASVVNFV 316
Query 301 VVTAAASSANSGFFSTGRMLFGLADEGHAPAAFHQLNRGGVPAPALLLTAPLLLTSIPLL 360
V+T+A SS+NSG +ST RMLFGL+ EG AP F LNR GVP AL TA +LL +IP+L
Sbjct 317 VLTSAMSSSNSGVYSTSRMLFGLSAEGSAPRLFKGLNRVGVPVRALFFTALVLLLTIPVL 376
Query 361 YAGRSVIGAFTLVTTVSSLLFMFVWAMIIISYLVYRRRHPQRHTDSVYKMPGGVVMCWAV 420
YAG S+I AFTL+T+V+S+LF+FVW+MI++SY+ +RR+HP+RH S YKMPGG++MC V
Sbjct 377 YAGASIIEAFTLITSVASMLFIFVWSMILVSYMCFRRKHPERHAASEYKMPGGLLMCVVV 436
Query 421 LVFFAFVIWTLTTETETATALAWFPLWFVLLAVGWLVTQRRQSRRS 466
L+FFAFV+WTLTTE ETATAL P+W VLL + W +R +S R
Sbjct 437 LLFFAFVVWTLTTEVETATALVALPVWLVLLGISWAFVRRSESHRQ 482
>gi|317126684|ref|YP_004100796.1| D-serine/D-alanine/glycine:proton symporter, AAT family [Intrasporangium
calvum DSM 43043]
gi|315590772|gb|ADU50069.1| D-serine/D-alanine/glycine:proton symporter, AAT family [Intrasporangium
calvum DSM 43043]
Length=505
Score = 595 bits (1533), Expect = 9e-168, Method: Compositional matrix adjust.
Identities = 281/448 (63%), Positives = 356/448 (80%), Gaps = 0/448 (0%)
Query 14 QPHLRRDLANRHIQLIAIGGAIGTGLFMGSGRTISLAGPAVMVVYGIIGFFVFFVLRAMG 73
PHL R L+NRHIQLIAIGGAIGTGLFMGSG+TISLAGP+V+ VY IIGF +FFV+RAMG
Sbjct 33 SPHLARSLSNRHIQLIAIGGAIGTGLFMGSGKTISLAGPSVIFVYMIIGFMLFFVMRAMG 92
Query 74 ELLLSNLNYKSFVDFAADLRGPAAGFFVGWSYWFAWVVTGIADLVAITGYARFWWPGLPI 133
ELLLSNLNYKSF DFAADL GP AGFF GW+YWF W+VTGIAD+VAI GY R+WW LP+
Sbjct 93 ELLLSNLNYKSFTDFAADLLGPWAGFFTGWTYWFCWIVTGIADIVAIAGYVRYWWADLPL 152
Query 134 WVPALVTVALILAVNLFSVRHFGELEFWFALIKVAAIVCLIAVGAILVATNFVSPHGVHA 193
W+PA+ + L+L++NL +V+ FGE EFWFAL+K+ AIV LI VG ++V +F +P+G A
Sbjct 153 WIPAVSAIVLLLSLNLPTVKAFGETEFWFALVKIVAIVTLIVVGIVMVFNSFTAPNGAEA 212
Query 194 TIENLWNDNGFFPTGFLGVVSGFQIAFFAYIGVELVGTAAAETADPRRTLPRAINAVPLR 253
+ NLWND G FPTG +G V+GFQIA FA++G+ELVGT AAET P RTLP+AIN++P+R
Sbjct 213 SFTNLWNDGGMFPTGVMGFVAGFQIAVFAFVGLELVGTTAAETKSPERTLPKAINSIPIR 272
Query 254 VAVFYIGALLAILAVVPWRQFASGESPFVTMFSLAGLAAAASVVNFVVVTAAASSANSGF 313
+ +FY+GAL+ I+AV PWR+ + +SPFV MFSLAGL AAS++NFVV+T+AASSANSG
Sbjct 273 IMLFYVGALVVIMAVTPWREIVADKSPFVGMFSLAGLGIAASLINFVVLTSAASSANSGM 332
Query 314 FSTGRMLFGLADEGHAPAAFHQLNRGGVPAPALLLTAPLLLTSIPLLYAGRSVIGAFTLV 373
+ST RM++GLA EG AP+ +L + VPA AL + LL + LLYAG S++ AFT+V
Sbjct 333 YSTSRMIYGLALEGDAPSRLRRLTKRKVPASALFFSCVFLLGGVALLYAGTSIMEAFTVV 392
Query 374 TTVSSLLFMFVWAMIIISYLVYRRRHPQRHTDSVYKMPGGVVMCWAVLVFFAFVIWTLTT 433
TT+S+LLFMFVW+MI+ISYL YRR+HP+RH S +K+PGGVVM W V FF F++W LT
Sbjct 393 TTISALLFMFVWSMILISYLAYRRKHPERHARSAFKLPGGVVMVWVVFGFFGFLLWALTQ 452
Query 434 ETETATALAWFPLWFVLLAVGWLVTQRR 461
+ +T AL P+WFV+L V W + +RR
Sbjct 453 QADTLRALLVTPVWFVVLGVAWAIVRRR 480
>gi|226307959|ref|YP_002767919.1| D-serine/D-alanine/glycine transporter [Rhodococcus erythropolis
PR4]
gi|226187076|dbj|BAH35180.1| probable D-serine/D-alanine/glycine transporter [Rhodococcus
erythropolis PR4]
Length=487
Score = 586 bits (1511), Expect = 3e-165, Method: Compositional matrix adjust.
Identities = 288/473 (61%), Positives = 368/473 (78%), Gaps = 2/473 (0%)
Query 9 DPTDTQPHLRRDLANRHIQLIAIGGAIGTGLFMGSGRTISLAGPAVMVVYGIIGFFVFFV 68
P+ PHL R L+NRHIQLIAIGGAIGTGLFMGSG+TISLAGP+V+ VY IIGF +FFV
Sbjct 12 KPSGEDPHLSRQLSNRHIQLIAIGGAIGTGLFMGSGKTISLAGPSVIFVYMIIGFMLFFV 71
Query 69 LRAMGELLLSNLNYKSFVDFAADLRGPAAGFFVGWSYWFAWVVTGIADLVAITGYARFWW 128
+RAMGELLLSN+ YKSF DFAADL GP AGFF GW+YWF W+VTGIAD++AI+GY ++WW
Sbjct 72 MRAMGELLLSNMAYKSFSDFAADLLGPWAGFFTGWTYWFCWIVTGIADVIAISGYFKYWW 131
Query 129 PGLPIWVPALVTVALILAVNLFSVRHFGELEFWFALIKVAAIVCLIAVGAILVATNFVSP 188
PGL W+PAL+T+A +L +NL +VR FGE EFWFALIK+ AIV LI VG ++V + F +P
Sbjct 132 PGLAAWIPALLTIAALLLLNLPTVRAFGETEFWFALIKIVAIVSLIIVGIVMVVSGFTAP 191
Query 189 HGVHATIENLWNDNGFFPTGFLGVVSGFQIAFFAYIGVELVGTAAAETADPRRTLPRAIN 248
+G + I+NLWND G FPTGF+G V+GFQIA FA++G+ELVGT AAE DP + LP+AIN
Sbjct 192 NGATSGIDNLWNDGGMFPTGFMGFVAGFQIAVFAFVGIELVGTTAAEAKDPEKNLPKAIN 251
Query 249 AVPLRVAVFYIGALLAILAVVPWRQFASGESPFVTMFSLAGLAAAASVVNFVVVTAAASS 308
++P+RV +FY+ AL I+AV PWR+ ++ +SPFV MF+LAGL AASV+NFVV+T+AASS
Sbjct 252 SIPIRVLLFYVVALTVIIAVTPWREISADKSPFVAMFTLAGLGIAASVINFVVLTSAASS 311
Query 309 ANSGFFSTGRMLFGLADEGHAPAAFHQLNRGGVPAPALLLTAPLLLTSIPLLYAGRSVIG 368
ANSG +ST RM+FGLA EG AP A +LN VPA AL+ + LL S+ LL++G SVI
Sbjct 312 ANSGIYSTSRMVFGLAQEGDAPRALGKLNSRKVPANALMFSCIFLLASLILLFSGDSVIE 371
Query 369 AFTLVTTVSSLLFMFVWAMIIISYLVYRRRHPQRHTDSVYKMPGGVVMCWAVLVFFAFVI 428
AFT+VTT+S+LLFMFVW +I+ SY+VYR+R P H S +KMPGG+VMCW VL FF F++
Sbjct 372 AFTVVTTISALLFMFVWTIILASYMVYRKRRPHLHEASKFKMPGGIVMCWVVLAFFVFIL 431
Query 429 WTLTTETETATALAWFPLWFVLLAVGWLVTQRRQSRRSF--GFHCQVVGVRQQ 479
W LTT+ +T AL P+WFV+L + W + +RR + R+ F ++ RQ
Sbjct 432 WALTTKDDTLQALVVTPIWFVVLGIAWAIIRRRPAHRARYDAFKSELDASRQN 484
>gi|229495051|ref|ZP_04388797.1| proline-specific permease ProY [Rhodococcus erythropolis SK121]
gi|229317982|gb|EEN83857.1| proline-specific permease ProY [Rhodococcus erythropolis SK121]
Length=487
Score = 585 bits (1509), Expect = 5e-165, Method: Compositional matrix adjust.
Identities = 288/473 (61%), Positives = 368/473 (78%), Gaps = 2/473 (0%)
Query 9 DPTDTQPHLRRDLANRHIQLIAIGGAIGTGLFMGSGRTISLAGPAVMVVYGIIGFFVFFV 68
P+ PHL R L+NRHIQLIAIGGAIGTGLFMGSG+TISLAGP+V+ VY IIGF +FFV
Sbjct 12 KPSGEDPHLSRQLSNRHIQLIAIGGAIGTGLFMGSGKTISLAGPSVIFVYMIIGFMLFFV 71
Query 69 LRAMGELLLSNLNYKSFVDFAADLRGPAAGFFVGWSYWFAWVVTGIADLVAITGYARFWW 128
+RAMGELLLSN+ YKSF DFAADL GP AGFF GW+YWF W+VTGIAD++AI+GY ++WW
Sbjct 72 MRAMGELLLSNMAYKSFSDFAADLLGPWAGFFTGWTYWFCWIVTGIADVIAISGYFKYWW 131
Query 129 PGLPIWVPALVTVALILAVNLFSVRHFGELEFWFALIKVAAIVCLIAVGAILVATNFVSP 188
PGL W+PAL+T+A +L +NL +VR FGE EFWFALIK+ AIV LI VG ++V + F +P
Sbjct 132 PGLAAWIPALLTIAALLLLNLPTVRAFGETEFWFALIKIIAIVSLIVVGIVMVVSGFTAP 191
Query 189 HGVHATIENLWNDNGFFPTGFLGVVSGFQIAFFAYIGVELVGTAAAETADPRRTLPRAIN 248
+G + I+NLWND G FPTGF+G V+GFQIA FA++G+ELVGT AAE DP + LP+AIN
Sbjct 192 NGATSGIDNLWNDGGMFPTGFMGFVAGFQIAVFAFVGIELVGTTAAEAKDPEKNLPKAIN 251
Query 249 AVPLRVAVFYIGALLAILAVVPWRQFASGESPFVTMFSLAGLAAAASVVNFVVVTAAASS 308
++P+RV +FY+ AL I+AV PWR+ ++ +SPFV MF+LAGL AASV+NFVV+T+AASS
Sbjct 252 SIPIRVLLFYVVALTVIIAVTPWREISADKSPFVAMFTLAGLGIAASVINFVVLTSAASS 311
Query 309 ANSGFFSTGRMLFGLADEGHAPAAFHQLNRGGVPAPALLLTAPLLLTSIPLLYAGRSVIG 368
ANSG +ST RM+FGLA EG AP A +LN VPA AL+ + LL S+ LL++G SVI
Sbjct 312 ANSGIYSTSRMVFGLAQEGDAPRALGKLNSRKVPANALMFSCIFLLASLILLFSGDSVIE 371
Query 369 AFTLVTTVSSLLFMFVWAMIIISYLVYRRRHPQRHTDSVYKMPGGVVMCWAVLVFFAFVI 428
AFT+VTT+S+LLFMFVW +I+ SY+VYR+R P H S +KMPGG+VMCW VL FF F++
Sbjct 372 AFTVVTTISALLFMFVWTIILASYMVYRKRRPHLHEASKFKMPGGIVMCWVVLAFFVFIL 431
Query 429 WTLTTETETATALAWFPLWFVLLAVGWLVTQRRQSRRSF--GFHCQVVGVRQQ 479
W LTT+ +T AL P+WFV+L + W + +RR + R+ F ++ RQ
Sbjct 432 WALTTKDDTLQALLVTPIWFVVLGIAWAIIRRRPAHRARYDAFKSELDASRQN 484
>gi|226361392|ref|YP_002779170.1| D-serine/D-alanine/glycine transporter [Rhodococcus opacus B4]
gi|226239877|dbj|BAH50225.1| putative D-serine/D-alanine/glycine transporter [Rhodococcus
opacus B4]
Length=490
Score = 579 bits (1492), Expect = 5e-163, Method: Compositional matrix adjust.
Identities = 285/461 (62%), Positives = 357/461 (78%), Gaps = 3/461 (0%)
Query 9 DP---TDTQPHLRRDLANRHIQLIAIGGAIGTGLFMGSGRTISLAGPAVMVVYGIIGFFV 65
DP + +PHL R LANRHIQLIAIGGAIGTGLFMGSG+TISLAGP+V+ VY IIGF +
Sbjct 16 DPGTRAEGEPHLSRQLANRHIQLIAIGGAIGTGLFMGSGKTISLAGPSVIFVYMIIGFML 75
Query 66 FFVLRAMGELLLSNLNYKSFVDFAADLRGPAAGFFVGWSYWFAWVVTGIADLVAITGYAR 125
FFV+RAMGELLLSNL+YKSF DF ADL GP AGFF GW+YWF W+VTGIAD++AI+GY R
Sbjct 76 FFVMRAMGELLLSNLHYKSFSDFTADLLGPWAGFFTGWTYWFCWIVTGIADIIAISGYVR 135
Query 126 FWWPGLPIWVPALVTVALILAVNLFSVRHFGELEFWFALIKVAAIVCLIAVGAILVATNF 185
+WWP L +W+PAL+ +A +L +NL +VR FGE EFWFALIK+ AI+ LI VG ++V T+F
Sbjct 136 YWWPDLQLWIPALIAIATLLLLNLPTVRAFGETEFWFALIKIIAILSLIVVGLVMVFTHF 195
Query 186 VSPHGVHATIENLWNDNGFFPTGFLGVVSGFQIAFFAYIGVELVGTAAAETADPRRTLPR 245
SP G A +NLWND G FPTG +G V+GFQIA FA++G+ELVGT AAE DP + LP+
Sbjct 196 TSPGGSEAGFDNLWNDGGMFPTGAMGFVAGFQIAVFAFVGIELVGTTAAEAKDPEKNLPK 255
Query 246 AINAVPLRVAVFYIGALLAILAVVPWRQFASGESPFVTMFSLAGLAAAASVVNFVVVTAA 305
AIN++P+R+ +FY+ +L+ I++V PWR+ GESPF MF+LAGL AA V+ FVV+T+A
Sbjct 256 AINSIPIRILLFYVVSLIVIISVTPWREVVPGESPFTAMFTLAGLGIAAGVIQFVVLTSA 315
Query 306 ASSANSGFFSTGRMLFGLADEGHAPAAFHQLNRGGVPAPALLLTAPLLLTSIPLLYAGRS 365
ASSANSG +ST RM++GLA EG APA +L+ VPA AL+ + LL++I LL++G S
Sbjct 316 ASSANSGIYSTSRMVYGLAQEGDAPARLGRLSSRKVPANALMFSCAFLLSAIALLFSGDS 375
Query 366 VIGAFTLVTTVSSLLFMFVWAMIIISYLVYRRRHPQRHTDSVYKMPGGVVMCWAVLVFFA 425
VI AFT VTT+SS+LF+FVW MI+ SYLVYRRR P+ H S +KMPGGVVMCW VL FF
Sbjct 376 VIEAFTTVTTISSVLFIFVWTMILASYLVYRRRRPELHEASRFKMPGGVVMCWVVLAFFV 435
Query 426 FVIWTLTTETETATALAWFPLWFVLLAVGWLVTQRRQSRRS 466
F+IW LT E +T AL P WFV+L + W V +RR R+
Sbjct 436 FLIWALTQEDDTLEALLVTPAWFVVLGIAWAVIRRRAPHRA 476
>gi|111019262|ref|YP_702234.1| amino acid APC transporter [Rhodococcus jostii RHA1]
gi|110818792|gb|ABG94076.1| D-serine/D-alanine/glycine transporter, APC family protein [Rhodococcus
jostii RHA1]
Length=490
Score = 577 bits (1486), Expect = 3e-162, Method: Compositional matrix adjust.
Identities = 285/465 (62%), Positives = 359/465 (78%), Gaps = 1/465 (0%)
Query 2 PDDIAAADPTDTQPHLRRDLANRHIQLIAIGGAIGTGLFMGSGRTISLAGPAVMVVYGII 61
P D + P +PHL R LANRHIQLIAIGGAIGTGLFMGSG+TISLAGP+V+ VY II
Sbjct 15 PGDGSGTGPAG-EPHLSRQLANRHIQLIAIGGAIGTGLFMGSGKTISLAGPSVIFVYMII 73
Query 62 GFFVFFVLRAMGELLLSNLNYKSFVDFAADLRGPAAGFFVGWSYWFAWVVTGIADLVAIT 121
GF +FFV+RAMGELLLSNL+YKSF DF ADL GP AGFF GW+YWF W+VTGIAD++AI+
Sbjct 74 GFMLFFVMRAMGELLLSNLHYKSFSDFTADLLGPWAGFFTGWTYWFCWIVTGIADIIAIS 133
Query 122 GYARFWWPGLPIWVPALVTVALILAVNLFSVRHFGELEFWFALIKVAAIVCLIAVGAILV 181
GY ++WWP L +W+PALV +A +L +NL +VR FGE EFWFALIK+ AIV LI VG ++V
Sbjct 134 GYVQYWWPDLQLWIPALVAIAALLLLNLPTVRAFGETEFWFALIKIIAIVSLIVVGLVMV 193
Query 182 ATNFVSPHGVHATIENLWNDNGFFPTGFLGVVSGFQIAFFAYIGVELVGTAAAETADPRR 241
T+F SP+G A +NLWND G FPTG +G V+GFQIA FA++G+ELVGT AAE DP +
Sbjct 194 FTHFTSPNGSEAGFDNLWNDGGMFPTGAMGFVAGFQIAVFAFVGIELVGTTAAEAKDPEK 253
Query 242 TLPRAINAVPLRVAVFYIGALLAILAVVPWRQFASGESPFVTMFSLAGLAAAASVVNFVV 301
LP+AIN++P+R+ +FY+ +L+ I++V PWR+ GESPF MF+LAGL AA V+ FVV
Sbjct 254 NLPKAINSIPIRILLFYVVSLIVIISVTPWREVVPGESPFTAMFTLAGLGIAAGVIQFVV 313
Query 302 VTAAASSANSGFFSTGRMLFGLADEGHAPAAFHQLNRGGVPAPALLLTAPLLLTSIPLLY 361
+T+AASSANSG +ST RM++GLA EG AP +L+ VPA AL+ + LL++I LL+
Sbjct 314 LTSAASSANSGIYSTSRMVYGLAQEGDAPGRLGRLSSRKVPANALMFSCAFLLSAIALLF 373
Query 362 AGRSVIGAFTLVTTVSSLLFMFVWAMIIISYLVYRRRHPQRHTDSVYKMPGGVVMCWAVL 421
+G SVI AFT VTT+SS+LFMFVW MI+ SY+VYR+R P+ H S +KMPGGVVMCW VL
Sbjct 374 SGDSVIEAFTTVTTISSVLFMFVWTMILASYIVYRKRRPELHEASKFKMPGGVVMCWVVL 433
Query 422 VFFAFVIWTLTTETETATALAWFPLWFVLLAVGWLVTQRRQSRRS 466
FF F+IW LT E +T AL P+WFV+L + W V +RR R+
Sbjct 434 AFFVFLIWALTQEADTLEALLVTPVWFVVLGIAWAVIRRRAPHRA 478
>gi|104783821|ref|YP_610319.1| D-alanine/D-serine/glycine permease [Pseudomonas entomophila
L48]
gi|95112808|emb|CAK17536.1| D-serine/D-alanine/glycine transport protein [Pseudomonas entomophila
L48]
Length=471
Score = 573 bits (1478), Expect = 2e-161, Method: Compositional matrix adjust.
Identities = 285/459 (63%), Positives = 354/459 (78%), Gaps = 2/459 (0%)
Query 7 AADPTDTQPHLRRDLANRHIQLIAIGGAIGTGLFMGSGRTISLAGPAVMVVYGIIGFFVF 66
+ P++ Q HL+R+L NRHIQLIAIGGAIGTGLFMGSG+TISLAGP+++ VY IIGF +F
Sbjct 5 SQTPSEEQ-HLQRNLTNRHIQLIAIGGAIGTGLFMGSGKTISLAGPSIIFVYMIIGFMLF 63
Query 67 FVLRAMGELLLSNLNYKSFVDFAADLRGPAAGFFVGWSYWFAWVVTGIADLVAITGYARF 126
FV+RAMGELLLSNLNYKSF+DF+ADL GP AG+F GW+YWF WVVTGIAD+VAI Y +F
Sbjct 64 FVMRAMGELLLSNLNYKSFIDFSADLLGPWAGYFTGWTYWFCWVVTGIADVVAIAAYTQF 123
Query 127 WWPGLPIWVPALVTVALILAVNLFSVRHFGELEFWFALIKVAAIVCLIAVGAILVATNFV 186
W+P LP W+PAL VAL+L++NL +V+ FGE+EFWFALIK+ AI+ L+A G +V T F
Sbjct 124 WFPDLPQWIPALSCVALLLSLNLVTVKMFGEMEFWFALIKIIAIMGLVATGLYMVVTGFQ 183
Query 187 SPHGVHATIENLWNDNGFFPTGFLGVVSGFQIAFFAYIGVELVGTAAAETADPRRTLPRA 246
SP G AT+ NLWND G FP G LG +GFQIA FA++G+ELVGT AAE +P RTLPRA
Sbjct 184 SPAGHTATLANLWNDGGMFPNGMLGFFAGFQIAVFAFVGIELVGTTAAEAKNPERTLPRA 243
Query 247 INAVPLRVAVFYIGALLAILAVVPWRQFASGESPFVTMFSLAGLAAAASVVNFVVVTAAA 306
IN++P+R+ VFY+ AL+AI+AV PWR G+SPFV +F LAGL AAAS++NFVV+T+AA
Sbjct 244 INSIPIRIIVFYVLALIAIMAVTPWRDVVPGKSPFVELFVLAGLPAAASIINFVVLTSAA 303
Query 307 SSANSGFFSTGRMLFGLADEGHAPAAFHQLNRGGVPAPALLLTAPLLLTSIPLLYAGRSV 366
SSANSG FST RMLFGLA EG AP AF +L+R VPA L + LL L+Y +V
Sbjct 304 SSANSGVFSTSRMLFGLAQEGDAPKAFEKLSRRAVPANGLYFSCTCLLLGAVLIYLVPNV 363
Query 367 IGAFTLVTTVSSLLFMFVWAMIIISYLVYRRRHPQRHTDSVYKMPGGVVMCWAVLVFFAF 426
I AFTLVTTVS++LFMFVW +I++SYL YR++ H S YKMPGG MC+ LVFFA
Sbjct 364 IEAFTLVTTVSAVLFMFVWTLILLSYLSYRKQRAALHEQSTYKMPGGRFMCYVCLVFFAG 423
Query 427 VIWTLTTETETATALAWFPLWFVLLAVGW-LVTQRRQSR 464
++ L+ E +T +AL P+WFV+LAV + V RRQ R
Sbjct 424 ILVLLSLEADTRSALVVTPIWFVILAVTYQFVRSRRQPR 462
>gi|118473656|ref|YP_887890.1| D-serine/D-alanine/glycine transporter [Mycobacterium smegmatis
str. MC2 155]
gi|118174943|gb|ABK75839.1| D-serine/D-alanine/glycine transporter [Mycobacterium smegmatis
str. MC2 155]
Length=479
Score = 573 bits (1478), Expect = 2e-161, Method: Compositional matrix adjust.
Identities = 281/451 (63%), Positives = 358/451 (80%), Gaps = 0/451 (0%)
Query 16 HLRRDLANRHIQLIAIGGAIGTGLFMGSGRTISLAGPAVMVVYGIIGFFVFFVLRAMGEL 75
HL R L+NRHIQLIAIGGAIGTGLFMGSG+T+SLAGP+V+ VY IIGF +FFV+RAMGEL
Sbjct 11 HLSRQLSNRHIQLIAIGGAIGTGLFMGSGKTVSLAGPSVIFVYMIIGFMLFFVMRAMGEL 70
Query 76 LLSNLNYKSFVDFAADLRGPAAGFFVGWSYWFAWVVTGIADLVAITGYARFWWPGLPIWV 135
LLSNL YKSF DFAADL GP AGFF GW+YWF W+VTG+A++VAI GY FWWP LP+W+
Sbjct 71 LLSNLEYKSFADFAADLLGPWAGFFTGWTYWFCWIVTGVAEVVAIAGYVAFWWPDLPLWI 130
Query 136 PALVTVALILAVNLFSVRHFGELEFWFALIKVAAIVCLIAVGAILVATNFVSPHGVHATI 195
PALVTVA+++ +NL +VR FGE EFWFA+IK+ AI+ LI VG ++V ++F +P G A++
Sbjct 131 PALVTVAVLITLNLATVRAFGETEFWFAMIKIVAILALIVVGLVMVLSHFRAPGGAVASL 190
Query 196 ENLWNDNGFFPTGFLGVVSGFQIAFFAYIGVELVGTAAAETADPRRTLPRAINAVPLRVA 255
NLW+D GFFPTG +G V+GFQIA FA++G+ELVGT AAE DP R LPRA+N++P+RV
Sbjct 191 SNLWDDGGFFPTGPMGFVAGFQIATFAFVGIELVGTTAAEARDPERNLPRAVNSIPVRVM 250
Query 256 VFYIGALLAILAVVPWRQFASGESPFVTMFSLAGLAAAASVVNFVVVTAAASSANSGFFS 315
+FY+ AL+ I+AV PWR+ + SPFV MFSLAGL AASVVNFVV+T+AASSANSG +S
Sbjct 251 LFYVAALVIIIAVTPWREISPDRSPFVAMFSLAGLGIAASVVNFVVLTSAASSANSGIYS 310
Query 316 TGRMLFGLADEGHAPAAFHQLNRGGVPAPALLLTAPLLLTSIPLLYAGRSVIGAFTLVTT 375
T RM++GL+ G APA+F +L VPA AL L+ +LL+S+ ++ AG S+I AFTLVTT
Sbjct 311 TSRMVYGLSCGGDAPASFGRLTSRRVPANALFLSGVVLLSSVVMVAAGDSIIAAFTLVTT 370
Query 376 VSSLLFMFVWAMIIISYLVYRRRHPQRHTDSVYKMPGGVVMCWAVLVFFAFVIWTLTTET 435
+SSL FMF+W +I+ SYLVYRRR PQ+H+ S +KMPGGVVMCW VL FF F++W T ++
Sbjct 371 ISSLCFMFIWTIILSSYLVYRRRRPQQHSASPFKMPGGVVMCWVVLAFFVFLVWAFTQKS 430
Query 436 ETATALAWFPLWFVLLAVGWLVTQRRQSRRS 466
+T AL P WFV+L + W +RR ++
Sbjct 431 DTLQALLVTPAWFVVLGIAWAFLRRRLGHKA 461
>gi|283786881|ref|YP_003366746.1| D-serine/D-alanine/glycine transporter [Citrobacter rodentium
ICC168]
gi|282950335|emb|CBG89982.1| D-serine/D-alanine/glycine transporter [Citrobacter rodentium
ICC168]
Length=469
Score = 572 bits (1473), Expect = 9e-161, Method: Compositional matrix adjust.
Identities = 276/459 (61%), Positives = 351/459 (77%), Gaps = 0/459 (0%)
Query 4 DIAAADPTDTQPHLRRDLANRHIQLIAIGGAIGTGLFMGSGRTISLAGPAVMVVYGIIGF 63
+AA + T+ LRR+L NRHIQLIAIGGAIGTGLFMGSG+TISLAGP+++ VY IIGF
Sbjct 6 KVAADEQASTEQSLRRNLTNRHIQLIAIGGAIGTGLFMGSGKTISLAGPSIIFVYMIIGF 65
Query 64 FVFFVLRAMGELLLSNLNYKSFVDFAADLRGPAAGFFVGWSYWFAWVVTGIADLVAITGY 123
+FFV+RAMGELLLSNL YKSF DFA+DL GP AG+F GW+YWF WVVTG+AD+VAIT Y
Sbjct 66 MLFFVMRAMGELLLSNLEYKSFSDFASDLLGPWAGYFTGWTYWFCWVVTGMADVVAITAY 125
Query 124 ARFWWPGLPIWVPALVTVALILAVNLFSVRHFGELEFWFALIKVAAIVCLIAVGAILVAT 183
A+FW+PGL WV +L V L+L++NL +V+ FGE+EFWFA+IK+ AIV LI VG +++A
Sbjct 126 AQFWFPGLSDWVASLAVVILLLSLNLATVKMFGEMEFWFAMIKIVAIVALIVVGLVMIAM 185
Query 184 NFVSPHGVHATIENLWNDNGFFPTGFLGVVSGFQIAFFAYIGVELVGTAAAETADPRRTL 243
+F SP GV A+ +LWND G+FP G G +GFQIA FA++G+ELVGT AAET DP ++L
Sbjct 186 HFKSPTGVEASFAHLWNDGGWFPKGISGFFAGFQIAVFAFVGIELVGTTAAETKDPEKSL 245
Query 244 PRAINAVPLRVAVFYIGALLAILAVVPWRQFASGESPFVTMFSLAGLAAAASVVNFVVVT 303
PRAIN++P+R+ +FY+ AL+ I++V PW +SPFV +F L GL AAASV+NFVV+T
Sbjct 246 PRAINSIPIRIIMFYVFALIVIMSVTPWSSVVPDKSPFVELFVLVGLPAAASVINFVVLT 305
Query 304 AAASSANSGFFSTGRMLFGLADEGHAPAAFHQLNRGGVPAPALLLTAPLLLTSIPLLYAG 363
+AASSANSG FST RMLFGLA EG AP AF +L++ VPA L + LL + +LY
Sbjct 306 SAASSANSGVFSTSRMLFGLAQEGVAPKAFAKLSKRAVPAKGLTFSCICLLGGVVMLYVN 365
Query 364 RSVIGAFTLVTTVSSLLFMFVWAMIIISYLVYRRRHPQRHTDSVYKMPGGVVMCWAVLVF 423
SVIGAFT++TTVS++LFMFVW +I+ SYLVYR++ PQ H S YKMP G +MCW + F
Sbjct 366 PSVIGAFTMITTVSAILFMFVWTIILCSYLVYRKQRPQLHEKSNYKMPLGKLMCWVCMAF 425
Query 424 FAFVIWTLTTETETATALAWFPLWFVLLAVGWLVTQRRQ 462
F FVI LT E +T AL PLWF+ L +GWL +++
Sbjct 426 FVFVIVLLTLEDDTRQALIVTPLWFIALGLGWLFIGKKR 464
>gi|295098353|emb|CBK87443.1| Gamma-aminobutyrate permease and related permeases [Enterobacter
cloacae subsp. cloacae NCTC 9394]
Length=469
Score = 572 bits (1473), Expect = 9e-161, Method: Compositional matrix adjust.
Identities = 273/459 (60%), Positives = 353/459 (77%), Gaps = 0/459 (0%)
Query 4 DIAAADPTDTQPHLRRDLANRHIQLIAIGGAIGTGLFMGSGRTISLAGPAVMVVYGIIGF 63
+AAA+ ++ LRR+L NRHIQLIAIGGAIGTGLFMGSG+TISLAGP+++ VY IIGF
Sbjct 6 KVAAAEEATSEQSLRRNLTNRHIQLIAIGGAIGTGLFMGSGKTISLAGPSIIFVYMIIGF 65
Query 64 FVFFVLRAMGELLLSNLNYKSFVDFAADLRGPAAGFFVGWSYWFAWVVTGIADLVAITGY 123
+FFV+RAMGELLLSNL YKSF DFA+DL GP AG+F GW+YWF WVVTG+AD+VAIT Y
Sbjct 66 MLFFVMRAMGELLLSNLEYKSFSDFASDLLGPWAGYFTGWTYWFCWVVTGMADVVAITAY 125
Query 124 ARFWWPGLPIWVPALVTVALILAVNLFSVRHFGELEFWFALIKVAAIVCLIAVGAILVAT 183
A+FW+PGL WV +L + L+L++NL +V+ FGE+EFWFA+IK+ AI+ LI VG ++V T
Sbjct 126 AQFWFPGLSDWVASLAVIVLLLSLNLATVKMFGEMEFWFAMIKIVAIIALIVVGLVMVLT 185
Query 184 NFVSPHGVHATIENLWNDNGFFPTGFLGVVSGFQIAFFAYIGVELVGTAAAETADPRRTL 243
+F SP GV A+ +LWND G+FP G G +GFQIA FA++G+ELVGT AAET DP ++L
Sbjct 186 HFQSPTGVQASFAHLWNDGGWFPKGISGFFAGFQIAVFAFVGIELVGTTAAETKDPEKSL 245
Query 244 PRAINAVPLRVAVFYIGALLAILAVVPWRQFASGESPFVTMFSLAGLAAAASVVNFVVVT 303
PRAIN++PLR+ +FY+ AL+ I++V PW +SPFV +F L GL AAAS++NFVV+T
Sbjct 246 PRAINSIPLRIIMFYVFALIVIMSVTPWSSVVPTKSPFVELFVLVGLPAAASLINFVVLT 305
Query 304 AAASSANSGFFSTGRMLFGLADEGHAPAAFHQLNRGGVPAPALLLTAPLLLTSIPLLYAG 363
+AASSANSG FST RMLFGLA EG AP+AF +L++ VPA L + LL + +LY
Sbjct 306 SAASSANSGVFSTSRMLFGLAQEGVAPSAFAKLSKRAVPAKGLTFSCICLLGGVVMLYVN 365
Query 364 RSVIGAFTLVTTVSSLLFMFVWAMIIISYLVYRRRHPQRHTDSVYKMPGGVVMCWAVLVF 423
SVIGAFT++TTVS++LFMFVW +I+ SYLVYR++ P H S+YKMP G +MCW + F
Sbjct 366 PSVIGAFTMITTVSAILFMFVWTIILCSYLVYRKQRPHLHEKSIYKMPLGKLMCWVCMAF 425
Query 424 FAFVIWTLTTETETATALAWFPLWFVLLAVGWLVTQRRQ 462
F FV+ LT E +T AL PLWF+ L +GWL +++
Sbjct 426 FVFVLVLLTLEEDTRQALMVTPLWFIALGLGWLFIGKKR 464
>gi|296100970|ref|YP_003611116.1| D-alanine/D-serine/glycine permease [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|295055429|gb|ADF60167.1| D-alanine/D-serine/glycine permease [Enterobacter cloacae subsp.
cloacae ATCC 13047]
Length=469
Score = 570 bits (1470), Expect = 2e-160, Method: Compositional matrix adjust.
Identities = 273/459 (60%), Positives = 353/459 (77%), Gaps = 0/459 (0%)
Query 4 DIAAADPTDTQPHLRRDLANRHIQLIAIGGAIGTGLFMGSGRTISLAGPAVMVVYGIIGF 63
+AA + ++ LRR+L NRHIQLIAIGGAIGTGLFMGSG+TISLAGP+++ VY IIGF
Sbjct 6 KVAATEEATSEQSLRRNLTNRHIQLIAIGGAIGTGLFMGSGKTISLAGPSIIFVYMIIGF 65
Query 64 FVFFVLRAMGELLLSNLNYKSFVDFAADLRGPAAGFFVGWSYWFAWVVTGIADLVAITGY 123
+FFV+RAMGELLLSNL YKSF DFA+DL GP AG+F GW+YWF WVVTG+AD+VAIT Y
Sbjct 66 MLFFVMRAMGELLLSNLEYKSFSDFASDLLGPWAGYFTGWTYWFCWVVTGMADVVAITAY 125
Query 124 ARFWWPGLPIWVPALVTVALILAVNLFSVRHFGELEFWFALIKVAAIVCLIAVGAILVAT 183
A+FW+PGL WV +L + L+L++NL +V+ FGE+EFWFA+IK+ AIV LI VG ++V T
Sbjct 126 AQFWFPGLSDWVASLAVIVLLLSLNLATVKMFGEMEFWFAMIKIVAIVALIVVGLVMVLT 185
Query 184 NFVSPHGVHATIENLWNDNGFFPTGFLGVVSGFQIAFFAYIGVELVGTAAAETADPRRTL 243
+F SP GV A+ +LWND G+FP G G +GFQIA FA++G+ELVGT AAET DP ++L
Sbjct 186 HFQSPTGVQASFTHLWNDGGWFPKGISGFFAGFQIAVFAFVGIELVGTTAAETKDPEKSL 245
Query 244 PRAINAVPLRVAVFYIGALLAILAVVPWRQFASGESPFVTMFSLAGLAAAASVVNFVVVT 303
PRAIN++P+R+ +FY+ AL+ I++V PW +SPFV +F L GL AAAS++NFVV+T
Sbjct 246 PRAINSIPVRIIMFYVFALIIIMSVTPWSSVVPSKSPFVELFVLVGLPAAASLINFVVLT 305
Query 304 AAASSANSGFFSTGRMLFGLADEGHAPAAFHQLNRGGVPAPALLLTAPLLLTSIPLLYAG 363
+AASSANSG FST RMLFGLA EG AP+AF +L++ VPA L + LL + +LY
Sbjct 306 SAASSANSGVFSTSRMLFGLAQEGVAPSAFAKLSKRAVPAKGLTFSCMCLLGGVVMLYVN 365
Query 364 RSVIGAFTLVTTVSSLLFMFVWAMIIISYLVYRRRHPQRHTDSVYKMPGGVVMCWAVLVF 423
SVIGAFT++TTVS++LFMFVW +I+ SYLVYR++ P H S+YKMP G +MCW + F
Sbjct 366 PSVIGAFTMITTVSAILFMFVWTIILCSYLVYRKQRPHLHEKSIYKMPLGKLMCWVCMAF 425
Query 424 FAFVIWTLTTETETATALAWFPLWFVLLAVGWLVTQRRQ 462
FAFV+ LT E +T AL PLWF+ L +GWL +++
Sbjct 426 FAFVLVLLTLEDDTRQALIVTPLWFIALGLGWLFIGKKR 464
>gi|334123746|ref|ZP_08497765.1| APC family amino acid-polyamine-organocation transporter [Enterobacter
hormaechei ATCC 49162]
gi|333390187|gb|EGK61334.1| APC family amino acid-polyamine-organocation transporter [Enterobacter
hormaechei ATCC 49162]
Length=469
Score = 570 bits (1469), Expect = 2e-160, Method: Compositional matrix adjust.
Identities = 273/459 (60%), Positives = 353/459 (77%), Gaps = 0/459 (0%)
Query 4 DIAAADPTDTQPHLRRDLANRHIQLIAIGGAIGTGLFMGSGRTISLAGPAVMVVYGIIGF 63
+AAA+ ++ LRR+L NRHIQLIAIGGAIGTGLFMGSG+TISLAGP+++ VY IIGF
Sbjct 6 KVAAAEEATSEQSLRRNLTNRHIQLIAIGGAIGTGLFMGSGKTISLAGPSIIFVYMIIGF 65
Query 64 FVFFVLRAMGELLLSNLNYKSFVDFAADLRGPAAGFFVGWSYWFAWVVTGIADLVAITGY 123
+FFV+RAMGELLLSNL YKSF DFA+DL GP AG+F GW+YWF WVVTG+AD+VAIT Y
Sbjct 66 MLFFVMRAMGELLLSNLEYKSFSDFASDLLGPWAGYFTGWTYWFCWVVTGMADVVAITAY 125
Query 124 ARFWWPGLPIWVPALVTVALILAVNLFSVRHFGELEFWFALIKVAAIVCLIAVGAILVAT 183
A+FW+PGL WV +L + L+L++NL +V+ FGE+EFWFA+IK+ AIV LI VG ++V T
Sbjct 126 AQFWFPGLSDWVASLAVIVLLLSLNLATVKMFGEMEFWFAMIKIVAIVALIVVGLVMVLT 185
Query 184 NFVSPHGVHATIENLWNDNGFFPTGFLGVVSGFQIAFFAYIGVELVGTAAAETADPRRTL 243
+F SP GV A+ +LWND G+FP G G +GFQIA FA++G+ELVGT AAET DP ++L
Sbjct 186 HFQSPTGVQASFAHLWNDGGWFPKGISGFFAGFQIAVFAFVGIELVGTTAAETKDPEKSL 245
Query 244 PRAINAVPLRVAVFYIGALLAILAVVPWRQFASGESPFVTMFSLAGLAAAASVVNFVVVT 303
PRAIN++PLR+ +FY+ AL+ I++V PW +SPFV +F L GL AAAS++NFVV+T
Sbjct 246 PRAINSIPLRIIMFYVFALIIIMSVTPWSSVVPTKSPFVELFVLVGLPAAASLINFVVLT 305
Query 304 AAASSANSGFFSTGRMLFGLADEGHAPAAFHQLNRGGVPAPALLLTAPLLLTSIPLLYAG 363
+AASSANSG FST RMLFGLA EG AP+AF +L++ VPA L + LL + +LY
Sbjct 306 SAASSANSGVFSTSRMLFGLAQEGVAPSAFAKLSKRAVPAKGLTFSCICLLGGVVMLYVN 365
Query 364 RSVIGAFTLVTTVSSLLFMFVWAMIIISYLVYRRRHPQRHTDSVYKMPGGVVMCWAVLVF 423
SVIGAFT++TTVS++LFMFVW +I+ SYLVYR++ P H S+YKMP G +MCW + F
Sbjct 366 PSVIGAFTMITTVSAILFMFVWTIILCSYLVYRKQRPHLHEKSIYKMPLGKLMCWVCMAF 425
Query 424 FAFVIWTLTTETETATALAWFPLWFVLLAVGWLVTQRRQ 462
F FV+ LT E +T AL PLWF+ L +GW+ +++
Sbjct 426 FVFVLVLLTLEDDTRQALIVTPLWFIALGLGWMFIGKKR 464
>gi|325273631|ref|ZP_08139847.1| D-alanine/D-serine/glycine permease [Pseudomonas sp. TJI-51]
gi|324101235|gb|EGB98865.1| D-alanine/D-serine/glycine permease [Pseudomonas sp. TJI-51]
Length=468
Score = 567 bits (1462), Expect = 1e-159, Method: Compositional matrix adjust.
Identities = 278/454 (62%), Positives = 350/454 (78%), Gaps = 1/454 (0%)
Query 14 QPHLRRDLANRHIQLIAIGGAIGTGLFMGSGRTISLAGPAVMVVYGIIGFFVFFVLRAMG 73
+PHL+R+L NRHIQLIAIGGAIGTGLFMGSG+TISLAGP+++ VY IIGF +FFV+RAMG
Sbjct 11 EPHLQRNLTNRHIQLIAIGGAIGTGLFMGSGKTISLAGPSIIFVYMIIGFMLFFVMRAMG 70
Query 74 ELLLSNLNYKSFVDFAADLRGPAAGFFVGWSYWFAWVVTGIADLVAITGYARFWWPGLPI 133
ELLLSNLNYKSF+DF+ADL GP AG+F GW+YWF WVVTGIAD+VAI Y +FW+P LP
Sbjct 71 ELLLSNLNYKSFIDFSADLLGPWAGYFTGWTYWFCWVVTGIADVVAIAAYTQFWFPDLPQ 130
Query 134 WVPALVTVALILAVNLFSVRHFGELEFWFALIKVAAIVCLIAVGAILVATNFVSPHGVHA 193
W+PAL VAL+L++NL +V+ FGELEFWFAL+K+ AI+ L+A G +V T F SP G A
Sbjct 131 WIPALTCVALLLSLNLVTVKMFGELEFWFALVKIVAILGLVATGLYMVITGFTSPSGRTA 190
Query 194 TIENLWNDNGFFPTGFLGVVSGFQIAFFAYIGVELVGTAAAETADPRRTLPRAINAVPLR 253
+ NLWND G FP G +G +GFQIA FA++G+ELVGT AAE +P RTLPRAIN++P+R
Sbjct 191 QLANLWNDGGMFPNGVMGFFAGFQIAVFAFVGIELVGTTAAEAKNPERTLPRAINSIPVR 250
Query 254 VAVFYIGALLAILAVVPWRQFASGESPFVTMFSLAGLAAAASVVNFVVVTAAASSANSGF 313
+ VFY+ AL+AI+AV PWR G+SPFV +F LAGL AAAS++NFVV+T+AASSANSG
Sbjct 251 IIVFYVLALIAIMAVTPWRDVVPGKSPFVELFVLAGLPAAASIINFVVLTSAASSANSGV 310
Query 314 FSTGRMLFGLADEGHAPAAFHQLNRGGVPAPALLLTAPLLLTSIPLLYAGRSVIGAFTLV 373
FST RML+GL+ EG AP AF +L+ VPA L + LL L+Y +V+ AFTLV
Sbjct 311 FSTSRMLYGLSQEGDAPRAFEKLSSRSVPANGLYFSCTCLLLGAVLIYLVPNVVEAFTLV 370
Query 374 TTVSSLLFMFVWAMIIISYLVYRRRHPQRHTDSVYKMPGGVVMCWAVLVFFAFVIWTLTT 433
TTVS++LFMFVW +I++SYL YR++ H S YKMPGG MC+ LVFFAF++ L+
Sbjct 371 TTVSAVLFMFVWTLILLSYLKYRKQRAALHQASKYKMPGGRFMCYVCLVFFAFILVLLSL 430
Query 434 ETETATALAWFPLWFVLLAVGWL-VTQRRQSRRS 466
E +T +AL P+WF+LLA + V RRQ R +
Sbjct 431 EADTRSALVVTPIWFLLLASTYQGVRSRRQPRST 464
>gi|345297603|ref|YP_004826961.1| amino acid permease-associated protein [Enterobacter asburiae
LF7a]
gi|345091540|gb|AEN63176.1| amino acid permease-associated region [Enterobacter asburiae
LF7a]
Length=469
Score = 567 bits (1462), Expect = 2e-159, Method: Compositional matrix adjust.
Identities = 273/459 (60%), Positives = 352/459 (77%), Gaps = 0/459 (0%)
Query 4 DIAAADPTDTQPHLRRDLANRHIQLIAIGGAIGTGLFMGSGRTISLAGPAVMVVYGIIGF 63
+ A + ++ LRR+L NRHIQLIAIGGAIGTGLFMGSG+TISLAGP+++ VY IIGF
Sbjct 6 KVVAEEEAPSEQSLRRNLTNRHIQLIAIGGAIGTGLFMGSGKTISLAGPSIIFVYMIIGF 65
Query 64 FVFFVLRAMGELLLSNLNYKSFVDFAADLRGPAAGFFVGWSYWFAWVVTGIADLVAITGY 123
+FFV+RAMGELLLSNL YKSF DFA+DL GP AG+F GW+YWF WVVTG+AD+VAIT Y
Sbjct 66 MLFFVMRAMGELLLSNLEYKSFSDFASDLLGPWAGYFTGWTYWFCWVVTGMADVVAITAY 125
Query 124 ARFWWPGLPIWVPALVTVALILAVNLFSVRHFGELEFWFALIKVAAIVCLIAVGAILVAT 183
A+FW+PGL WV +L + L+L++NL +V+ FGE+EFWFA+IK+ AIV LI VG ++V T
Sbjct 126 AQFWFPGLSDWVASLAVIVLLLSLNLATVKMFGEMEFWFAMIKIVAIVGLIVVGLVMVLT 185
Query 184 NFVSPHGVHATIENLWNDNGFFPTGFLGVVSGFQIAFFAYIGVELVGTAAAETADPRRTL 243
+F SP GV A+ +LWND G+FP G G +GFQIA FA++G+ELVGT AAET DP ++L
Sbjct 186 HFQSPTGVQASFTHLWNDGGWFPKGLSGFFAGFQIAVFAFVGIELVGTTAAETKDPEKSL 245
Query 244 PRAINAVPLRVAVFYIGALLAILAVVPWRQFASGESPFVTMFSLAGLAAAASVVNFVVVT 303
PRAIN++P+R+ +FY+ AL+ I++V PW +SPFV +F L GL AAAS++NFVV+T
Sbjct 246 PRAINSIPVRIIMFYVFALIIIMSVTPWSSVVPTKSPFVELFVLVGLPAAASLINFVVLT 305
Query 304 AAASSANSGFFSTGRMLFGLADEGHAPAAFHQLNRGGVPAPALLLTAPLLLTSIPLLYAG 363
+AASSANSG FST RMLFGLA EG AP+AF +L++ VPA L + LL + +LY
Sbjct 306 SAASSANSGVFSTSRMLFGLAQEGVAPSAFAKLSKRAVPAKGLTFSCMCLLGGVVMLYVN 365
Query 364 RSVIGAFTLVTTVSSLLFMFVWAMIIISYLVYRRRHPQRHTDSVYKMPGGVVMCWAVLVF 423
SVIGAFT++TTVS++LFMFVW +I+ SYLVYR++ P H S+YKMP G +MCW + F
Sbjct 366 PSVIGAFTMITTVSAILFMFVWTIILCSYLVYRKQRPHLHEKSIYKMPLGKLMCWVCMAF 425
Query 424 FAFVIWTLTTETETATALAWFPLWFVLLAVGWLVTQRRQ 462
FAFVI LT E +T AL PLWF+ L +GWL +++
Sbjct 426 FAFVIVLLTLEDDTRQALIVTPLWFIALGLGWLFIGKKR 464
>gi|204926669|ref|ZP_03217871.1| D-serine/D-alanine/glycine transporter [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|204323334|gb|EDZ08529.1| D-serine/D-alanine/glycine transporter [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
Length=469
Score = 566 bits (1459), Expect = 3e-159, Method: Compositional matrix adjust.
Identities = 272/459 (60%), Positives = 351/459 (77%), Gaps = 0/459 (0%)
Query 4 DIAAADPTDTQPHLRRDLANRHIQLIAIGGAIGTGLFMGSGRTISLAGPAVMVVYGIIGF 63
+AA + + LRR+L NRHIQLIAIGGAIGTGLFMGSG+TISLAGP+++ VY IIGF
Sbjct 6 KVAADEQAPAEQSLRRNLTNRHIQLIAIGGAIGTGLFMGSGKTISLAGPSIIFVYMIIGF 65
Query 64 FVFFVLRAMGELLLSNLNYKSFVDFAADLRGPAAGFFVGWSYWFAWVVTGIADLVAITGY 123
+FFV+RAMGELLLSNL YKSF DFA+DL GP AG+F GW+YWF WVVTG+AD+VAIT Y
Sbjct 66 MLFFVMRAMGELLLSNLEYKSFSDFASDLLGPWAGYFTGWTYWFCWVVTGMADVVAITAY 125
Query 124 ARFWWPGLPIWVPALVTVALILAVNLFSVRHFGELEFWFALIKVAAIVCLIAVGAILVAT 183
A+FW+PGL WV +L V L+L++NL +V+ FGE+EFWFA++K+ AIV LI VG +++A
Sbjct 126 AQFWFPGLSDWVASLAVVILLLSLNLATVKMFGEMEFWFAMVKIVAIVALIVVGLVMIAM 185
Query 184 NFVSPHGVHATIENLWNDNGFFPTGFLGVVSGFQIAFFAYIGVELVGTAAAETADPRRTL 243
+F SP GV A+ +LWND G+FP G G +GFQIA FA++G+ELVGT AAET DP ++L
Sbjct 186 HFKSPTGVEASFAHLWNDGGWFPKGISGFFAGFQIAVFAFVGIELVGTTAAETKDPEKSL 245
Query 244 PRAINAVPLRVAVFYIGALLAILAVVPWRQFASGESPFVTMFSLAGLAAAASVVNFVVVT 303
PRAIN++P+R+ +FY+ AL+ I++V PW +SPFV +F L GL AAASV+NFVV+T
Sbjct 246 PRAINSIPIRIIMFYVFALIVIMSVTPWSSVVPDKSPFVELFVLVGLPAAASVINFVVLT 305
Query 304 AAASSANSGFFSTGRMLFGLADEGHAPAAFHQLNRGGVPAPALLLTAPLLLTSIPLLYAG 363
+AASSANSG FST RMLFGLA EG AP AF +L++ VPA L + LL + +L
Sbjct 306 SAASSANSGVFSTSRMLFGLAQEGVAPKAFAKLSKRAVPAKGLTFSCICLLGGVVMLMVN 365
Query 364 RSVIGAFTLVTTVSSLLFMFVWAMIIISYLVYRRRHPQRHTDSVYKMPGGVVMCWAVLVF 423
SVIGAFT++TTVS++LFMFVW +I+ SYLVYR++ P H S+YKMP G +MCW + F
Sbjct 366 PSVIGAFTMITTVSAILFMFVWTIILCSYLVYRKKRPHLHEKSIYKMPLGKLMCWVCMAF 425
Query 424 FAFVIWTLTTETETATALAWFPLWFVLLAVGWLVTQRRQ 462
FAFV+ LT E +T AL PLWF+ L +GWL+ +++
Sbjct 426 FAFVLVLLTLEDDTRQALIVTPLWFITLGLGWLLIGKKR 464
>gi|16767644|ref|NP_463259.1| D-alanine/D-serine/glycine permease [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|167551362|ref|ZP_02345117.1| proline-specific permease ProY [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|167991170|ref|ZP_02572269.1| D-serine/D-alanine/glycine transporter [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
67 more sequence titles
Length=469
Score = 566 bits (1459), Expect = 3e-159, Method: Compositional matrix adjust.
Identities = 272/459 (60%), Positives = 351/459 (77%), Gaps = 0/459 (0%)
Query 4 DIAAADPTDTQPHLRRDLANRHIQLIAIGGAIGTGLFMGSGRTISLAGPAVMVVYGIIGF 63
+AA + + LRR+L NRHIQLIAIGGAIGTGLFMGSG+TISLAGP+++ VY IIGF
Sbjct 6 KVAADEQAPAEQSLRRNLTNRHIQLIAIGGAIGTGLFMGSGKTISLAGPSIIFVYMIIGF 65
Query 64 FVFFVLRAMGELLLSNLNYKSFVDFAADLRGPAAGFFVGWSYWFAWVVTGIADLVAITGY 123
+FFV+RAMGELLLSNL YKSF DFA+DL GP AG+F GW+YWF WVVTG+AD+VAIT Y
Sbjct 66 MLFFVMRAMGELLLSNLEYKSFSDFASDLLGPWAGYFTGWTYWFCWVVTGMADVVAITAY 125
Query 124 ARFWWPGLPIWVPALVTVALILAVNLFSVRHFGELEFWFALIKVAAIVCLIAVGAILVAT 183
A+FW+PGL WV +L V L+L++NL +V+ FGE+EFWFA++K+ AIV LI VG +++A
Sbjct 126 AQFWFPGLSDWVASLAVVILLLSLNLATVKMFGEMEFWFAMVKIVAIVALIVVGLVMIAM 185
Query 184 NFVSPHGVHATIENLWNDNGFFPTGFLGVVSGFQIAFFAYIGVELVGTAAAETADPRRTL 243
+F SP GV A+ +LWND G+FP G G +GFQIA FA++G+ELVGT AAET DP ++L
Sbjct 186 HFKSPTGVEASFAHLWNDGGWFPKGISGFFAGFQIAVFAFVGIELVGTTAAETKDPEKSL 245
Query 244 PRAINAVPLRVAVFYIGALLAILAVVPWRQFASGESPFVTMFSLAGLAAAASVVNFVVVT 303
PRAIN++P+R+ +FY+ AL+ I++V PW +SPFV +F L GL AAASV+NFVV+T
Sbjct 246 PRAINSIPIRIIMFYVFALIVIMSVTPWSSVVPDKSPFVELFVLVGLPAAASVINFVVLT 305
Query 304 AAASSANSGFFSTGRMLFGLADEGHAPAAFHQLNRGGVPAPALLLTAPLLLTSIPLLYAG 363
+AASSANSG FST RMLFGLA EG AP AF +L++ VPA L + LL + +L
Sbjct 306 SAASSANSGVFSTSRMLFGLAQEGVAPKAFAKLSKRAVPAKGLTFSCICLLGGVVMLMVN 365
Query 364 RSVIGAFTLVTTVSSLLFMFVWAMIIISYLVYRRRHPQRHTDSVYKMPGGVVMCWAVLVF 423
SVIGAFT++TTVS++LFMFVW +I+ SYLVYR++ P H S+YKMP G +MCW + F
Sbjct 366 PSVIGAFTMITTVSAILFMFVWTIILCSYLVYRKKRPHLHEKSIYKMPLGKLMCWVCMAF 425
Query 424 FAFVIWTLTTETETATALAWFPLWFVLLAVGWLVTQRRQ 462
FAFV+ LT E +T AL PLWF+ L +GWL+ +++
Sbjct 426 FAFVLVLLTLEDDTRQALIVTPLWFIALGLGWLLIGKKR 464
>gi|146310043|ref|YP_001175117.1| D-alanine/D-serine/glycine permease [Enterobacter sp. 638]
gi|145316919|gb|ABP59066.1| D-serine/D-alanine/glycine:proton symporter, AAT family [Enterobacter
sp. 638]
Length=469
Score = 566 bits (1458), Expect = 4e-159, Method: Compositional matrix adjust.
Identities = 271/459 (60%), Positives = 351/459 (77%), Gaps = 0/459 (0%)
Query 4 DIAAADPTDTQPHLRRDLANRHIQLIAIGGAIGTGLFMGSGRTISLAGPAVMVVYGIIGF 63
+ A + ++ LRR+L NRHIQLIAIGGAIGTGLFMGSG+TISLAGP+++ VY IIGF
Sbjct 6 KVVADEEASSEQSLRRNLTNRHIQLIAIGGAIGTGLFMGSGKTISLAGPSIIFVYMIIGF 65
Query 64 FVFFVLRAMGELLLSNLNYKSFVDFAADLRGPAAGFFVGWSYWFAWVVTGIADLVAITGY 123
+FFV+RAMGELLLSNL YKSF DFA+DL GP AG+F GW+YWF WVVTG+AD+VAIT Y
Sbjct 66 MLFFVMRAMGELLLSNLEYKSFSDFASDLLGPWAGYFTGWTYWFCWVVTGMADVVAITAY 125
Query 124 ARFWWPGLPIWVPALVTVALILAVNLFSVRHFGELEFWFALIKVAAIVCLIAVGAILVAT 183
A+FW+PGL WV +L + L+L++NL +V+ FGE+EFWFA+IK+ AIV LI VG +++ T
Sbjct 126 AQFWFPGLSDWVASLAVIVLLLSLNLATVKMFGEMEFWFAMIKIVAIVGLIVVGLVMILT 185
Query 184 NFVSPHGVHATIENLWNDNGFFPTGFLGVVSGFQIAFFAYIGVELVGTAAAETADPRRTL 243
+F SP GV A+ +LWND G+FP G G +GFQIA FA++G+ELVGT AAET DP ++L
Sbjct 186 HFQSPTGVQASFTHLWNDGGWFPKGLSGFFAGFQIAVFAFVGIELVGTTAAETKDPEKSL 245
Query 244 PRAINAVPLRVAVFYIGALLAILAVVPWRQFASGESPFVTMFSLAGLAAAASVVNFVVVT 303
PRAIN++P+R+ +FY+ AL+ I++V PW +SPFV +F L GL AAAS++NFVV+T
Sbjct 246 PRAINSIPIRIIMFYVFALIVIMSVTPWGSVVPTKSPFVELFVLVGLPAAASLINFVVLT 305
Query 304 AAASSANSGFFSTGRMLFGLADEGHAPAAFHQLNRGGVPAPALLLTAPLLLTSIPLLYAG 363
+AASSANSG FST RMLFGLA EG AP+AF +L++ VPA L + LL + +LY
Sbjct 306 SAASSANSGVFSTSRMLFGLAQEGVAPSAFAKLSKRAVPAKGLTFSCICLLGGVVMLYVN 365
Query 364 RSVIGAFTLVTTVSSLLFMFVWAMIIISYLVYRRRHPQRHTDSVYKMPGGVVMCWAVLVF 423
SVIGAFT++TTVS++LFMFVW +I+ SYLVYR++ PQ H S YKMP G +MCW + F
Sbjct 366 PSVIGAFTMITTVSAILFMFVWTIILCSYLVYRKQRPQLHASSKYKMPLGKLMCWVCMAF 425
Query 424 FAFVIWTLTTETETATALAWFPLWFVLLAVGWLVTQRRQ 462
F FV+ LT E +T AL PLWF+ L +GWL +++
Sbjct 426 FVFVLVLLTLEDDTRQALMVTPLWFIALGLGWLFIGKKR 464
>gi|157163679|ref|YP_001460997.1| D-alanine/D-serine/glycine permease [Escherichia coli HS]
gi|260858361|ref|YP_003232252.1| D-alanine/D-serine/glycine transporter [Escherichia coli O26:H11
str. 11368]
gi|260870965|ref|YP_003237367.1| D-alanine/D-serine/glycine transporter [Escherichia coli O111:H-
str. 11128]
13 more sequence titles
Length=467
Score = 566 bits (1458), Expect = 4e-159, Method: Compositional matrix adjust.
Identities = 273/462 (60%), Positives = 348/462 (76%), Gaps = 0/462 (0%)
Query 4 DIAAADPTDTQPHLRRDLANRHIQLIAIGGAIGTGLFMGSGRTISLAGPAVMVVYGIIGF 63
+ A D + LRR+L NRHIQLIAIGGAIGTGLFMGSG+TISLAGP+++ VY IIGF
Sbjct 6 KVVADDQAPAEQSLRRNLTNRHIQLIAIGGAIGTGLFMGSGKTISLAGPSIIFVYMIIGF 65
Query 64 FVFFVLRAMGELLLSNLNYKSFVDFAADLRGPAAGFFVGWSYWFAWVVTGIADLVAITGY 123
+FFV+RAMGELLLSNL YKSF DFA+DL GP AG+F GW+YWF WVVTG+AD+VAIT Y
Sbjct 66 MLFFVMRAMGELLLSNLEYKSFSDFASDLLGPWAGYFTGWTYWFCWVVTGMADVVAITAY 125
Query 124 ARFWWPGLPIWVPALVTVALILAVNLFSVRHFGELEFWFALIKVAAIVCLIAVGAILVAT 183
A+FW+P L WV +L + L+L +NL +V+ FGE+EFWFA+IK+ AIV LI VG ++VA
Sbjct 126 AQFWFPDLSDWVASLAVIVLLLTLNLATVKMFGEMEFWFAMIKIVAIVSLIVVGLVMVAM 185
Query 184 NFVSPHGVHATIENLWNDNGFFPTGFLGVVSGFQIAFFAYIGVELVGTAAAETADPRRTL 243
+F SP GV A+ +LWND G+FP G G +GFQIA FA++G+ELVGT AAET DP ++L
Sbjct 186 HFQSPTGVEASFAHLWNDGGWFPKGLSGFFAGFQIAVFAFVGIELVGTTAAETKDPEKSL 245
Query 244 PRAINAVPLRVAVFYIGALLAILAVVPWRQFASGESPFVTMFSLAGLAAAASVVNFVVVT 303
PRAIN++P+R+ +FY+ AL+ I++V PW +SPFV +F L GL AAASV+NFVV+T
Sbjct 246 PRAINSIPIRIIMFYVFALIVIMSVTPWSSVVPEKSPFVELFVLVGLPAAASVINFVVLT 305
Query 304 AAASSANSGFFSTGRMLFGLADEGHAPAAFHQLNRGGVPAPALLLTAPLLLTSIPLLYAG 363
+AASSANSG FST RMLFGLA EG AP AF +L++ VPA L + LL + +LY
Sbjct 306 SAASSANSGVFSTSRMLFGLAQEGVAPKAFAKLSKRAVPAKGLTFSCICLLGGVVMLYVN 365
Query 364 RSVIGAFTLVTTVSSLLFMFVWAMIIISYLVYRRRHPQRHTDSVYKMPGGVVMCWAVLVF 423
SVIGAFT++TTVS++LFMFVW +I+ SYLVYR++ P H S+YKMP G +MCW + F
Sbjct 366 PSVIGAFTMITTVSAILFMFVWTIILCSYLVYRKQRPHLHEKSIYKMPLGKLMCWVCMAF 425
Query 424 FAFVIWTLTTETETATALAWFPLWFVLLAVGWLVTQRRQSRR 465
F FVI LT E +T AL PLWF+ L +GWL +++ +
Sbjct 426 FVFVIVLLTLEDDTRQALLVTPLWFIALGLGWLFIGKKRMAK 467
>gi|218556761|ref|YP_002389675.1| D-alanine/D-serine/glycine permease [Escherichia coli IAI1]
gi|293476515|ref|ZP_06664923.1| D-alanine/D-serine/glycine permease [Escherichia coli B088]
gi|331680345|ref|ZP_08381004.1| D-serine/D-alanine/glycine transporter [Escherichia coli H591]
8 more sequence titles
Length=470
Score = 566 bits (1458), Expect = 4e-159, Method: Compositional matrix adjust.
Identities = 273/460 (60%), Positives = 348/460 (76%), Gaps = 0/460 (0%)
Query 4 DIAAADPTDTQPHLRRDLANRHIQLIAIGGAIGTGLFMGSGRTISLAGPAVMVVYGIIGF 63
+ A D + LRR+L NRHIQLIAIGGAIGTGLFMGSG+TISLAGP+++ VY IIGF
Sbjct 6 KVVADDQAPAEQSLRRNLTNRHIQLIAIGGAIGTGLFMGSGKTISLAGPSIIFVYMIIGF 65
Query 64 FVFFVLRAMGELLLSNLNYKSFVDFAADLRGPAAGFFVGWSYWFAWVVTGIADLVAITGY 123
+FFV+RAMGELLLSNL YKSF DFA+DL GP AG+F GW+YWF WVVTG+AD+VAIT Y
Sbjct 66 MLFFVMRAMGELLLSNLEYKSFSDFASDLLGPWAGYFTGWTYWFCWVVTGMADVVAITAY 125
Query 124 ARFWWPGLPIWVPALVTVALILAVNLFSVRHFGELEFWFALIKVAAIVCLIAVGAILVAT 183
A+FW+P L WV +L + L+L +NL +V+ FGE+EFWFA+IK+ AIV LI VG ++VA
Sbjct 126 AQFWFPDLSDWVASLAVIVLLLTLNLATVKMFGEMEFWFAMIKIVAIVSLIVVGLVMVAM 185
Query 184 NFVSPHGVHATIENLWNDNGFFPTGFLGVVSGFQIAFFAYIGVELVGTAAAETADPRRTL 243
+F SP GV A+ +LWND G+FP G G +GFQIA FA++G+ELVGT AAET DP ++L
Sbjct 186 HFQSPTGVEASFAHLWNDGGWFPKGLSGFFAGFQIAVFAFVGIELVGTTAAETKDPEKSL 245
Query 244 PRAINAVPLRVAVFYIGALLAILAVVPWRQFASGESPFVTMFSLAGLAAAASVVNFVVVT 303
PRAIN++P+R+ +FY+ AL+ I++V PW +SPFV +F L GL AAASV+NFVV+T
Sbjct 246 PRAINSIPIRIIMFYVFALIVIMSVTPWSSVVPEKSPFVELFVLVGLPAAASVINFVVLT 305
Query 304 AAASSANSGFFSTGRMLFGLADEGHAPAAFHQLNRGGVPAPALLLTAPLLLTSIPLLYAG 363
+AASSANSG FST RMLFGLA EG AP AF +L++ VPA L + LL + +LY
Sbjct 306 SAASSANSGVFSTSRMLFGLAQEGVAPKAFAKLSKRAVPAKGLTFSCICLLGGVVMLYVN 365
Query 364 RSVIGAFTLVTTVSSLLFMFVWAMIIISYLVYRRRHPQRHTDSVYKMPGGVVMCWAVLVF 423
SVIGAFT++TTVS++LFMFVW +I+ SYLVYR++ P H S+YKMP G +MCW + F
Sbjct 366 PSVIGAFTMITTVSAILFMFVWTIILCSYLVYRKQRPHLHEKSIYKMPLGKLMCWVCMAF 425
Query 424 FAFVIWTLTTETETATALAWFPLWFVLLAVGWLVTQRRQS 463
F FVI LT E +T AL PLWF+ L +GWL ++++
Sbjct 426 FVFVIVLLTLEDDTRQALLVTPLWFIALGLGWLFIGKKRA 465
>gi|238910555|ref|ZP_04654392.1| D-alanine/D-serine/glycine permease [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
Length=469
Score = 566 bits (1458), Expect = 5e-159, Method: Compositional matrix adjust.
Identities = 272/459 (60%), Positives = 351/459 (77%), Gaps = 0/459 (0%)
Query 4 DIAAADPTDTQPHLRRDLANRHIQLIAIGGAIGTGLFMGSGRTISLAGPAVMVVYGIIGF 63
+AA + + LRR+L NRHIQLIAIGGAIGTGLFMGSG+TISLAGP+++ VY IIGF
Sbjct 6 KVAADEQAPAEQSLRRNLTNRHIQLIAIGGAIGTGLFMGSGKTISLAGPSIIFVYMIIGF 65
Query 64 FVFFVLRAMGELLLSNLNYKSFVDFAADLRGPAAGFFVGWSYWFAWVVTGIADLVAITGY 123
+FFV+RAMGELLLSNL YKSF DFA+DL GP AG+F GW+YWF WVVTG+AD+VAIT Y
Sbjct 66 MLFFVMRAMGELLLSNLEYKSFSDFASDLLGPWAGYFTGWTYWFCWVVTGMADVVAITAY 125
Query 124 ARFWWPGLPIWVPALVTVALILAVNLFSVRHFGELEFWFALIKVAAIVCLIAVGAILVAT 183
A+FW+PGL WV +L V L+L++NL +V+ FGE+EFWFA++K+ AIV LI VG +++A
Sbjct 126 AQFWFPGLSDWVASLAVVILLLSLNLATVKMFGEMEFWFAMVKIVAIVALIVVGLVMIAM 185
Query 184 NFVSPHGVHATIENLWNDNGFFPTGFLGVVSGFQIAFFAYIGVELVGTAAAETADPRRTL 243
+F SP GV A+ +LWND G+FP G G +GFQIA FA++G+ELVGT AAET DP ++L
Sbjct 186 HFKSPTGVEASFAHLWNDGGWFPKGISGFFAGFQIAVFAFVGIELVGTTAAETKDPEKSL 245
Query 244 PRAINAVPLRVAVFYIGALLAILAVVPWRQFASGESPFVTMFSLAGLAAAASVVNFVVVT 303
PRAIN++P+R+ +FY+ AL+ I++V PW +SPFV +F L GL AAASV+NFVV+T
Sbjct 246 PRAINSIPIRIIMFYVFALIVIMSVTPWSSVVPDKSPFVELFVLVGLPAAASVINFVVLT 305
Query 304 AAASSANSGFFSTGRMLFGLADEGHAPAAFHQLNRGGVPAPALLLTAPLLLTSIPLLYAG 363
+AASSANSG FST RMLFGLA EG AP AF +L++ VPA L + LL + +L
Sbjct 306 SAASSANSGVFSTSRMLFGLAQEGVAPKAFAKLSKRAVPAKGLTFSCICLLGGVVMLMIN 365
Query 364 RSVIGAFTLVTTVSSLLFMFVWAMIIISYLVYRRRHPQRHTDSVYKMPGGVVMCWAVLVF 423
SVIGAFT++TTVS++LFMFVW +I+ SYLVYR++ P H S+YKMP G +MCW + F
Sbjct 366 PSVIGAFTMITTVSAILFMFVWTIILCSYLVYRKKRPHLHEKSIYKMPLGKLMCWVCMAF 425
Query 424 FAFVIWTLTTETETATALAWFPLWFVLLAVGWLVTQRRQ 462
FAFV+ LT E +T AL PLWF+ L +GWL+ +++
Sbjct 426 FAFVLVLLTLEDDTRQALIVTPLWFIALGLGWLLIGKKR 464
>gi|340001743|ref|YP_004732627.1| D-serine/D-alanine/glycine transporter [Salmonella bongori NCTC
12419]
gi|339515105|emb|CCC32883.1| D-serine/D-alanine/glycine transporter [Salmonella bongori NCTC
12419]
Length=469
Score = 566 bits (1458), Expect = 5e-159, Method: Compositional matrix adjust.
Identities = 272/459 (60%), Positives = 351/459 (77%), Gaps = 0/459 (0%)
Query 4 DIAAADPTDTQPHLRRDLANRHIQLIAIGGAIGTGLFMGSGRTISLAGPAVMVVYGIIGF 63
+AA + + LRR+L NRHIQLIAIGGAIGTGLFMGSG+TISLAGP+++ VY IIGF
Sbjct 6 KVAADEQAPAEQSLRRNLTNRHIQLIAIGGAIGTGLFMGSGKTISLAGPSIIFVYMIIGF 65
Query 64 FVFFVLRAMGELLLSNLNYKSFVDFAADLRGPAAGFFVGWSYWFAWVVTGIADLVAITGY 123
+FFV+RAMGELLLSNL YKSF DFA+DL GP AG+F GW+YWF WVVTG+AD+VAIT Y
Sbjct 66 MLFFVMRAMGELLLSNLEYKSFSDFASDLLGPWAGYFTGWTYWFCWVVTGMADVVAITAY 125
Query 124 ARFWWPGLPIWVPALVTVALILAVNLFSVRHFGELEFWFALIKVAAIVCLIAVGAILVAT 183
A+FW+PGL WV +L V L+L++NL +V+ FGE+EFWFA++K+ AIV LI VG +++A
Sbjct 126 AQFWFPGLSDWVASLAVVILLLSLNLATVKMFGEMEFWFAMVKIVAIVALIVVGLVMIAM 185
Query 184 NFVSPHGVHATIENLWNDNGFFPTGFLGVVSGFQIAFFAYIGVELVGTAAAETADPRRTL 243
+F SP GV A+ +LWND G+FP G G +GFQIA FA++G+ELVGT AAET DP ++L
Sbjct 186 HFKSPTGVEASFAHLWNDGGWFPKGISGFFAGFQIAVFAFVGIELVGTTAAETKDPEKSL 245
Query 244 PRAINAVPLRVAVFYIGALLAILAVVPWRQFASGESPFVTMFSLAGLAAAASVVNFVVVT 303
PRAIN++P+R+ +FY+ AL+ I++V PW +SPFV +F L GL AAASV+NFVV+T
Sbjct 246 PRAINSIPIRIIMFYVFALIVIMSVTPWSSVVPDKSPFVELFVLVGLPAAASVINFVVLT 305
Query 304 AAASSANSGFFSTGRMLFGLADEGHAPAAFHQLNRGGVPAPALLLTAPLLLTSIPLLYAG 363
+AASSANSG FST RMLFGLA EG AP AF +L++ VPA L + LL + +L
Sbjct 306 SAASSANSGVFSTSRMLFGLAQEGVAPKAFAKLSKRAVPAKGLTFSCICLLGGVVMLMVN 365
Query 364 RSVIGAFTLVTTVSSLLFMFVWAMIIISYLVYRRRHPQRHTDSVYKMPGGVVMCWAVLVF 423
SVIGAFT++TTVS++LFMFVW +I+ SYLVYR++ P H S+YKMP G +MCW + F
Sbjct 366 PSVIGAFTMITTVSAILFMFVWTIILCSYLVYRKQRPHLHEKSIYKMPLGKLMCWVCMAF 425
Query 424 FAFVIWTLTTETETATALAWFPLWFVLLAVGWLVTQRRQ 462
FAFV+ LT E +T AL PLWF+ L +GWL+ +++
Sbjct 426 FAFVLVLLTLEDDTRQALIVTPLWFIALGLGWLLIGKKR 464
>gi|161617670|ref|YP_001591635.1| D-alanine/D-serine/glycine permease [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|168464717|ref|ZP_02698620.1| proline-specific permease ProY [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|194446063|ref|YP_002043652.1| D-alanine/D-serine/glycine permease [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
11 more sequence titles
Length=467
Score = 565 bits (1457), Expect = 5e-159, Method: Compositional matrix adjust.
Identities = 272/459 (60%), Positives = 350/459 (77%), Gaps = 0/459 (0%)
Query 4 DIAAADPTDTQPHLRRDLANRHIQLIAIGGAIGTGLFMGSGRTISLAGPAVMVVYGIIGF 63
+AA + + LRR+L NRHIQLIAIGGAIGTGLFMGSG+TISLAGP+++ VY IIGF
Sbjct 6 KVAADEQAPAEQSLRRNLTNRHIQLIAIGGAIGTGLFMGSGKTISLAGPSIIFVYMIIGF 65
Query 64 FVFFVLRAMGELLLSNLNYKSFVDFAADLRGPAAGFFVGWSYWFAWVVTGIADLVAITGY 123
+FFV+RAMGELLLSNL YKSF DFA+DL GP AG+F GW+YWF WVVTG+AD+VAIT Y
Sbjct 66 MLFFVMRAMGELLLSNLEYKSFSDFASDLLGPWAGYFTGWTYWFCWVVTGMADVVAITAY 125
Query 124 ARFWWPGLPIWVPALVTVALILAVNLFSVRHFGELEFWFALIKVAAIVCLIAVGAILVAT 183
A+FW+PGL WV +L V L+L++NL +V+ FGE+EFWFA++K+ AIV LI VG +++A
Sbjct 126 AQFWFPGLSDWVASLAVVILLLSLNLATVKMFGEMEFWFAMVKIVAIVALIVVGLVMIAM 185
Query 184 NFVSPHGVHATIENLWNDNGFFPTGFLGVVSGFQIAFFAYIGVELVGTAAAETADPRRTL 243
+F SP GV A+ +LWND G+FP G G +GFQIA FA++G+ELVGT AAET DP ++L
Sbjct 186 HFKSPTGVEASFAHLWNDGGWFPKGISGFFAGFQIAVFAFVGIELVGTTAAETKDPEKSL 245
Query 244 PRAINAVPLRVAVFYIGALLAILAVVPWRQFASGESPFVTMFSLAGLAAAASVVNFVVVT 303
PRAIN++P+R+ +FY+ AL+ I++V PW +SPFV +F L GL AAASV+NFVV+T
Sbjct 246 PRAINSIPIRIIMFYVFALIVIMSVTPWSSVVPDKSPFVELFVLVGLPAAASVINFVVLT 305
Query 304 AAASSANSGFFSTGRMLFGLADEGHAPAAFHQLNRGGVPAPALLLTAPLLLTSIPLLYAG 363
+AASSANSG FST RMLFGLA EG AP AF +L++ VPA L + LL + +L
Sbjct 306 SAASSANSGVFSTSRMLFGLAQEGVAPKAFAKLSKRAVPAKGLTFSCICLLGGVVMLMVN 365
Query 364 RSVIGAFTLVTTVSSLLFMFVWAMIIISYLVYRRRHPQRHTDSVYKMPGGVVMCWAVLVF 423
SVIGAFT++TTVS++LFMFVW +I+ SYLVYR++ P H S+YKMP G +MCW + F
Sbjct 366 PSVIGAFTMITTVSAILFMFVWTIILCSYLVYRKKRPHLHEKSIYKMPLGKLMCWVCMAF 425
Query 424 FAFVIWTLTTETETATALAWFPLWFVLLAVGWLVTQRRQ 462
FAFV+ LT E +T AL PLWF+ L +GWL ++ +
Sbjct 426 FAFVLVLLTLEDDTRQALIVTPLWFIALGLGWLFLRKNK 464
>gi|323975443|gb|EGB70544.1| amino acid permease [Escherichia coli TW10509]
Length=470
Score = 565 bits (1457), Expect = 5e-159, Method: Compositional matrix adjust.
Identities = 272/460 (60%), Positives = 348/460 (76%), Gaps = 0/460 (0%)
Query 4 DIAAADPTDTQPHLRRDLANRHIQLIAIGGAIGTGLFMGSGRTISLAGPAVMVVYGIIGF 63
+ A D + LRR+L NRHIQLIAIGGAIGTGLFMGSG+TISLAGP+++ VY IIGF
Sbjct 6 KVVADDQAPAEQSLRRNLTNRHIQLIAIGGAIGTGLFMGSGKTISLAGPSIIFVYMIIGF 65
Query 64 FVFFVLRAMGELLLSNLNYKSFVDFAADLRGPAAGFFVGWSYWFAWVVTGIADLVAITGY 123
+FFV+RAMGELLLSNL YKSF DFA+DL GP AG+F GW+YWF WVVTG+AD+VAIT Y
Sbjct 66 MLFFVMRAMGELLLSNLEYKSFSDFASDLLGPWAGYFTGWTYWFCWVVTGMADVVAITAY 125
Query 124 ARFWWPGLPIWVPALVTVALILAVNLFSVRHFGELEFWFALIKVAAIVCLIAVGAILVAT 183
A+FW+P L WV +L + L+L +NL +V+ FGE+EFWFA+IK+ AIV LI VG ++VA
Sbjct 126 AQFWFPDLSDWVASLAVIVLLLTLNLATVKMFGEMEFWFAMIKIVAIVSLIVVGLVMVAM 185
Query 184 NFVSPHGVHATIENLWNDNGFFPTGFLGVVSGFQIAFFAYIGVELVGTAAAETADPRRTL 243
+F SP GV A+ +LWND G+FP G G +GFQIA FA++G+ELVGT AAET DP ++L
Sbjct 186 HFQSPTGVEASFAHLWNDGGWFPKGLSGFFAGFQIAVFAFVGIELVGTTAAETKDPEKSL 245
Query 244 PRAINAVPLRVAVFYIGALLAILAVVPWRQFASGESPFVTMFSLAGLAAAASVVNFVVVT 303
PRAIN++P+R+ +FY+ AL+ I++V PW +SPFV +F L GL AAASV+NFVV+T
Sbjct 246 PRAINSIPIRIIMFYVFALIVIMSVTPWSSVVPEKSPFVELFVLVGLPAAASVINFVVLT 305
Query 304 AAASSANSGFFSTGRMLFGLADEGHAPAAFHQLNRGGVPAPALLLTAPLLLTSIPLLYAG 363
+AASSANSG FST RMLFGLA EG AP AF +L++ VPA L + LL + +LY
Sbjct 306 SAASSANSGVFSTSRMLFGLAQEGVAPKAFAKLSKRAVPAKGLTFSCICLLGGVVMLYVN 365
Query 364 RSVIGAFTLVTTVSSLLFMFVWAMIIISYLVYRRRHPQRHTDSVYKMPGGVVMCWAVLVF 423
SVIGAFT++TTVS++LFMFVW +I+ SYLVYR++ P H S+YKMP G +MCW + F
Sbjct 366 PSVIGAFTMITTVSAILFMFVWTIILCSYLVYRKQRPHLHEKSIYKMPLGKLMCWVCMAF 425
Query 424 FAFVIWTLTTETETATALAWFPLWFVLLAVGWLVTQRRQS 463
F FV+ LT E +T AL PLWF+ L +GWL ++++
Sbjct 426 FVFVVVLLTLEDDTRQALLVTPLWFIALGLGWLFIGKKRT 465
>gi|301024490|ref|ZP_07188168.1| amino acid permease [Escherichia coli MS 69-1]
gi|300396569|gb|EFJ80107.1| amino acid permease [Escherichia coli MS 69-1]
Length=470
Score = 565 bits (1457), Expect = 6e-159, Method: Compositional matrix adjust.
Identities = 272/460 (60%), Positives = 348/460 (76%), Gaps = 0/460 (0%)
Query 4 DIAAADPTDTQPHLRRDLANRHIQLIAIGGAIGTGLFMGSGRTISLAGPAVMVVYGIIGF 63
+ A D + LRR+L NRHIQLIAIGGAIGTGLFMGSG+TISLAGP+++ VY IIGF
Sbjct 6 KVVADDQAPAEQSLRRNLTNRHIQLIAIGGAIGTGLFMGSGKTISLAGPSIIFVYMIIGF 65
Query 64 FVFFVLRAMGELLLSNLNYKSFVDFAADLRGPAAGFFVGWSYWFAWVVTGIADLVAITGY 123
+FFV+RAMGELLLSNL YKSF DFA+DL GP AG+F GW+YWF WVVTG+AD+VAIT Y
Sbjct 66 MLFFVMRAMGELLLSNLEYKSFSDFASDLLGPWAGYFTGWTYWFCWVVTGMADVVAITAY 125
Query 124 ARFWWPGLPIWVPALVTVALILAVNLFSVRHFGELEFWFALIKVAAIVCLIAVGAILVAT 183
A+FW+P L WV +L + L+L +NL +V+ FGE+EFWFA+IK+ AIV LI VG ++VA
Sbjct 126 AQFWFPELSDWVASLAVIVLLLTLNLATVKMFGEMEFWFAMIKIVAIVSLIVVGLVMVAM 185
Query 184 NFVSPHGVHATIENLWNDNGFFPTGFLGVVSGFQIAFFAYIGVELVGTAAAETADPRRTL 243
+F SP GV A+ +LWND G+FP G G +GFQIA FA++G+ELVGT AAET DP ++L
Sbjct 186 HFQSPTGVEASFAHLWNDGGWFPKGLSGFFAGFQIAVFAFVGIELVGTTAAETKDPEKSL 245
Query 244 PRAINAVPLRVAVFYIGALLAILAVVPWRQFASGESPFVTMFSLAGLAAAASVVNFVVVT 303
PRAIN++P+R+ +FY+ AL+ I++V PW +SPFV +F L GL AAASV+NFVV+T
Sbjct 246 PRAINSIPIRIIMFYVFALIVIMSVTPWSSVVPEKSPFVELFVLVGLPAAASVINFVVLT 305
Query 304 AAASSANSGFFSTGRMLFGLADEGHAPAAFHQLNRGGVPAPALLLTAPLLLTSIPLLYAG 363
+AASSANSG FST RMLFGLA EG AP AF +L++ VPA L + LL + +LY
Sbjct 306 SAASSANSGVFSTSRMLFGLAQEGVAPKAFAKLSKRAVPAKGLTFSCICLLGGVVMLYVN 365
Query 364 RSVIGAFTLVTTVSSLLFMFVWAMIIISYLVYRRRHPQRHTDSVYKMPGGVVMCWAVLVF 423
SVIGAFT++TTVS++LFMFVW +I+ SYLVYR++ P H S+YKMP G +MCW + F
Sbjct 366 PSVIGAFTMITTVSAILFMFVWTIILCSYLVYRKQRPHLHEKSIYKMPLGKLMCWVCMAF 425
Query 424 FAFVIWTLTTETETATALAWFPLWFVLLAVGWLVTQRRQS 463
F FV+ LT E +T AL PLWF+ L +GWL ++++
Sbjct 426 FVFVVVLLTLEDDTRQALLVTPLWFIALGLGWLFIGKKRA 465
>gi|313500822|gb|ADR62188.1| D-alanine/D-serine/glycine permease [Pseudomonas putida BIRD-1]
Length=468
Score = 565 bits (1456), Expect = 7e-159, Method: Compositional matrix adjust.
Identities = 279/457 (62%), Positives = 350/457 (77%), Gaps = 2/457 (0%)
Query 11 TDTQPHLRRDLANRHIQLIAIGGAIGTGLFMGSGRTISLAGPAVMVVYGIIGFFVFFVLR 70
TD +PHL+R+L NRHIQLIAIGGAIGTGLFMGSG+TISLAGP+++ VY IIGF +FFV+R
Sbjct 9 TD-EPHLQRNLTNRHIQLIAIGGAIGTGLFMGSGKTISLAGPSIIFVYMIIGFMLFFVMR 67
Query 71 AMGELLLSNLNYKSFVDFAADLRGPAAGFFVGWSYWFAWVVTGIADLVAITGYARFWWPG 130
AMGELLLSNLNYKSF+DF+ADL GP AG+F GW+YWF WVVTGIAD+VAI Y +FW+P
Sbjct 68 AMGELLLSNLNYKSFIDFSADLLGPWAGYFTGWTYWFCWVVTGIADVVAIAAYTQFWFPD 127
Query 131 LPIWVPALVTVALILAVNLFSVRHFGELEFWFALIKVAAIVCLIAVGAILVATNFVSPHG 190
LP W+PAL V L+L++NL +V+ FGE+EFWFALIK+ AI+ L+A G +V T F SP G
Sbjct 128 LPQWIPALTCVGLLLSLNLVTVKMFGEMEFWFALIKIVAILGLVATGLYMVITGFTSPSG 187
Query 191 VHATIENLWNDNGFFPTGFLGVVSGFQIAFFAYIGVELVGTAAAETADPRRTLPRAINAV 250
A + NLWND G FP G +G +GFQIA FA++G+ELVGT AAE +P RTLPRAIN++
Sbjct 188 RTAQLANLWNDGGMFPHGLMGFFAGFQIAVFAFVGIELVGTTAAEAKNPERTLPRAINSI 247
Query 251 PLRVAVFYIGALLAILAVVPWRQFASGESPFVTMFSLAGLAAAASVVNFVVVTAAASSAN 310
P+R+ VFY+ AL+AI+AV PWR G+SPFV +F LAGL AAAS++NFVV+T+AASSAN
Sbjct 248 PIRIIVFYVLALIAIMAVTPWRDVVPGKSPFVELFVLAGLPAAASIINFVVLTSAASSAN 307
Query 311 SGFFSTGRMLFGLADEGHAPAAFHQLNRGGVPAPALLLTAPLLLTSIPLLYAGRSVIGAF 370
SG FST RML+GL+ EG AP AF +L+ VPA L + LL L+Y +V+ AF
Sbjct 308 SGVFSTSRMLYGLSQEGDAPKAFEKLSSRSVPANGLYFSCTCLLLGAVLIYLVPNVVEAF 367
Query 371 TLVTTVSSLLFMFVWAMIIISYLVYRRRHPQRHTDSVYKMPGGVVMCWAVLVFFAFVIWT 430
TLVTTVS++LFMFVW +I++SYL YR+ H S YKMPGG MC+ L FFAF++
Sbjct 368 TLVTTVSAVLFMFVWTLILLSYLKYRKNRAALHQASNYKMPGGRFMCYVCLSFFAFILVL 427
Query 431 LTTETETATALAWFPLWFVLLAVGW-LVTQRRQSRRS 466
L+ E +T +AL P+WFV+LAV + LV RR R +
Sbjct 428 LSLEADTRSALVVTPIWFVVLAVTYQLVRSRRHPRTA 464
>gi|293407934|ref|ZP_06651774.1| D-alanine/D-serine/glycine permease [Escherichia coli B354]
gi|291472185|gb|EFF14667.1| D-alanine/D-serine/glycine permease [Escherichia coli B354]
Length=470
Score = 565 bits (1456), Expect = 8e-159, Method: Compositional matrix adjust.
Identities = 272/460 (60%), Positives = 348/460 (76%), Gaps = 0/460 (0%)
Query 4 DIAAADPTDTQPHLRRDLANRHIQLIAIGGAIGTGLFMGSGRTISLAGPAVMVVYGIIGF 63
+ A D + LRR+L NRHIQLIAIGGAIGTGLFMGSG+TISLAGP+++ VY IIGF
Sbjct 6 KVVADDQAPAEQSLRRNLTNRHIQLIAIGGAIGTGLFMGSGKTISLAGPSIIFVYMIIGF 65
Query 64 FVFFVLRAMGELLLSNLNYKSFVDFAADLRGPAAGFFVGWSYWFAWVVTGIADLVAITGY 123
+FFV+RAMGELLLSNL YKSF DFA+DL GP AG+F GW+YWF WVVTG+AD+VAIT Y
Sbjct 66 MLFFVMRAMGELLLSNLEYKSFSDFASDLLGPWAGYFTGWTYWFCWVVTGMADVVAITAY 125
Query 124 ARFWWPGLPIWVPALVTVALILAVNLFSVRHFGELEFWFALIKVAAIVCLIAVGAILVAT 183
A+FW+P L WV +L + L+L +NL +V+ FGE+EFWFA+IK+ AIV LI VG ++VA
Sbjct 126 AQFWFPELSDWVASLAVIVLLLTLNLATVKMFGEMEFWFAMIKIVAIVSLIVVGLVMVAM 185
Query 184 NFVSPHGVHATIENLWNDNGFFPTGFLGVVSGFQIAFFAYIGVELVGTAAAETADPRRTL 243
+F SP GV A+ +LWND G+FP G G +GFQIA FA++G+ELVGT AAET DP ++L
Sbjct 186 HFQSPTGVEASFAHLWNDGGWFPKGLSGFFAGFQIAVFAFVGIELVGTTAAETKDPEKSL 245
Query 244 PRAINAVPLRVAVFYIGALLAILAVVPWRQFASGESPFVTMFSLAGLAAAASVVNFVVVT 303
PRAIN++P+R+ +FY+ AL+ I++V PW +SPFV +F L GL AAASV+NFVV+T
Sbjct 246 PRAINSIPIRIIMFYVFALIVIMSVTPWSSVVPEKSPFVELFVLVGLPAAASVINFVVLT 305
Query 304 AAASSANSGFFSTGRMLFGLADEGHAPAAFHQLNRGGVPAPALLLTAPLLLTSIPLLYAG 363
+AASSANSG FST RMLFGLA EG AP AF +L++ VPA L + LL + +LY
Sbjct 306 SAASSANSGVFSTSRMLFGLAQEGVAPKAFAKLSKRAVPAKGLTFSCICLLGGVVMLYVN 365
Query 364 RSVIGAFTLVTTVSSLLFMFVWAMIIISYLVYRRRHPQRHTDSVYKMPGGVVMCWAVLVF 423
SVIGAFT++TTVS++LFMFVW +I+ SYLVYR++ P H S+YKMP G +MCW + F
Sbjct 366 PSVIGAFTMITTVSAILFMFVWTIILCSYLVYRKQRPHLHEKSIYKMPLGKLMCWVCMAF 425
Query 424 FAFVIWTLTTETETATALAWFPLWFVLLAVGWLVTQRRQS 463
F FV+ LT E +T AL PLWF+ L +GWL ++++
Sbjct 426 FVFVLVLLTLEDDTRQALLVTPLWFIALGLGWLFIGKKRA 465
>gi|283834827|ref|ZP_06354568.1| D-serine/D-alanine/glycine transporter [Citrobacter youngae ATCC
29220]
gi|291069076|gb|EFE07185.1| D-serine/D-alanine/glycine transporter [Citrobacter youngae ATCC
29220]
Length=469
Score = 565 bits (1455), Expect = 9e-159, Method: Compositional matrix adjust.
Identities = 269/459 (59%), Positives = 349/459 (77%), Gaps = 0/459 (0%)
Query 4 DIAAADPTDTQPHLRRDLANRHIQLIAIGGAIGTGLFMGSGRTISLAGPAVMVVYGIIGF 63
+ A + ++ LRR+L NRHIQLIAIGGAIGTGLFMGSG+TISLAGP+++ VY IIGF
Sbjct 6 KVEAVEEASSEQSLRRNLTNRHIQLIAIGGAIGTGLFMGSGKTISLAGPSIIFVYMIIGF 65
Query 64 FVFFVLRAMGELLLSNLNYKSFVDFAADLRGPAAGFFVGWSYWFAWVVTGIADLVAITGY 123
+FFV+RAMGELLLSNL YKSF DFA+DL GP AG+F GW+YWF WVVTG+AD+VAIT Y
Sbjct 66 MLFFVMRAMGELLLSNLEYKSFSDFASDLLGPWAGYFTGWTYWFCWVVTGMADVVAITAY 125
Query 124 ARFWWPGLPIWVPALVTVALILAVNLFSVRHFGELEFWFALIKVAAIVCLIAVGAILVAT 183
A+FW+P L WV +L + L+L++NL +V+ FGE+EFWFA+IK+ AI+ LI VG ++V T
Sbjct 126 AQFWFPELSDWVASLAVIVLLLSLNLATVKMFGEMEFWFAMIKIVAIIGLIVVGLVMVLT 185
Query 184 NFVSPHGVHATIENLWNDNGFFPTGFLGVVSGFQIAFFAYIGVELVGTAAAETADPRRTL 243
+F SP GV A+ +LWND G+FP G G +GFQIA FA++G+ELVGT AAET DP ++L
Sbjct 186 HFQSPTGVQASFTHLWNDGGWFPKGLSGFFAGFQIAVFAFVGIELVGTTAAETKDPEKSL 245
Query 244 PRAINAVPLRVAVFYIGALLAILAVVPWRQFASGESPFVTMFSLAGLAAAASVVNFVVVT 303
PRAIN++P+R+ +FY+ AL+ I++V PW +SPFV +F L GL AAAS++NFVV+T
Sbjct 246 PRAINSIPIRIIMFYVFALIVIMSVTPWSSVVPSKSPFVELFVLVGLPAAASLINFVVLT 305
Query 304 AAASSANSGFFSTGRMLFGLADEGHAPAAFHQLNRGGVPAPALLLTAPLLLTSIPLLYAG 363
+AASSANSG FST RMLFGLA EG AP AF +L++ VPA L + LL + +LY
Sbjct 306 SAASSANSGVFSTSRMLFGLAQEGVAPKAFAKLSKRAVPAKGLTFSCICLLGGVVMLYVN 365
Query 364 RSVIGAFTLVTTVSSLLFMFVWAMIIISYLVYRRRHPQRHTDSVYKMPGGVVMCWAVLVF 423
SVIGAFT++TTVS++LFMFVW +I+ SYLVYR++ P H S+YKMP G +MCW + F
Sbjct 366 PSVIGAFTMITTVSAILFMFVWTIILCSYLVYRKQRPHLHEKSIYKMPLGKLMCWVCMAF 425
Query 424 FAFVIWTLTTETETATALAWFPLWFVLLAVGWLVTQRRQ 462
F FV+ LT E +T AL PLWF+ L +GWL +++
Sbjct 426 FVFVLVLLTLEEDTRQALIVTPLWFIALGLGWLFIGKKR 464
>gi|209749940|gb|ACI73277.1| transport protein of D-alanine / D-serine / glycine [Escherichia
coli]
gi|323189907|gb|EFZ75185.1| D-serine/D-alanine/glycine transporter [Escherichia coli RN587/1]
Length=470
Score = 565 bits (1455), Expect = 9e-159, Method: Compositional matrix adjust.
Identities = 272/460 (60%), Positives = 348/460 (76%), Gaps = 0/460 (0%)
Query 4 DIAAADPTDTQPHLRRDLANRHIQLIAIGGAIGTGLFMGSGRTISLAGPAVMVVYGIIGF 63
+ A D + LRR+L NRHIQLIAIGGAIGTGLFMGSG+TISLAGP+++ VY IIGF
Sbjct 6 KVVADDQAPAEQSLRRNLTNRHIQLIAIGGAIGTGLFMGSGKTISLAGPSIIFVYMIIGF 65
Query 64 FVFFVLRAMGELLLSNLNYKSFVDFAADLRGPAAGFFVGWSYWFAWVVTGIADLVAITGY 123
+FFV+RAMGELLLSNL YKSF DFA+DL GP AG+F GW+YWF WVVTG+AD+VAIT Y
Sbjct 66 MLFFVMRAMGELLLSNLEYKSFSDFASDLLGPWAGYFTGWTYWFCWVVTGMADVVAITAY 125
Query 124 ARFWWPGLPIWVPALVTVALILAVNLFSVRHFGELEFWFALIKVAAIVCLIAVGAILVAT 183
A+FW+P L WV +L + L+L +NL +V+ FGE+EFWFA+IK+ AIV LI VG ++VA
Sbjct 126 AQFWFPDLSDWVASLAVIVLLLTLNLATVKMFGEMEFWFAMIKIVAIVSLIVVGLVMVAM 185
Query 184 NFVSPHGVHATIENLWNDNGFFPTGFLGVVSGFQIAFFAYIGVELVGTAAAETADPRRTL 243
+F SP GV A+ +LWND G+FP G G +GFQIA FA++G+ELVGT AAET DP ++L
Sbjct 186 HFQSPTGVEASFAHLWNDGGWFPKGLSGFFAGFQIAVFAFVGIELVGTTAAETKDPEKSL 245
Query 244 PRAINAVPLRVAVFYIGALLAILAVVPWRQFASGESPFVTMFSLAGLAAAASVVNFVVVT 303
PRAIN++P+R+ +FY+ AL+ I++V PW +SPFV +F L GL AAASV+NFVV+T
Sbjct 246 PRAINSIPIRIIMFYVFALIVIMSVTPWSSVVPEKSPFVELFVLVGLPAAASVINFVVLT 305
Query 304 AAASSANSGFFSTGRMLFGLADEGHAPAAFHQLNRGGVPAPALLLTAPLLLTSIPLLYAG 363
+AASSANSG FST RMLFGLA EG AP AF +L++ VPA L + LL + +LY
Sbjct 306 SAASSANSGVFSTSRMLFGLAQEGVAPKAFAKLSKRAVPAKGLTFSCICLLGGVVMLYVN 365
Query 364 RSVIGAFTLVTTVSSLLFMFVWAMIIISYLVYRRRHPQRHTDSVYKMPGGVVMCWAVLVF 423
SVIGAFT++TTVS++LFMFVW +I+ SYLVYR++ P H S+YKMP G +MCW + F
Sbjct 366 PSVIGAFTMITTVSAILFMFVWTIILCSYLVYRKQRPHLHEKSIYKMPLGKLMCWVCMAF 425
Query 424 FAFVIWTLTTETETATALAWFPLWFVLLAVGWLVTQRRQS 463
F FV+ LT E +T AL PLWF+ L +GWL ++++
Sbjct 426 FVFVLVLLTLEDDTRQALLVTPLWFIALGLGWLFIGKKRA 465
>gi|15804799|ref|NP_290840.1| D-alanine/D-serine/glycine permease [Escherichia coli O157:H7
EDL933]
gi|15834440|ref|NP_313213.1| D-alanine/D-serine/glycine permease [Escherichia coli O157:H7
str. Sakai]
gi|16132030|ref|NP_418629.1| D-alanine/D-serine/glycine transporter [Escherichia coli str.
K-12 substr. MG1655]
170 more sequence titles
Length=470
Score = 565 bits (1455), Expect = 9e-159, Method: Compositional matrix adjust.
Identities = 272/460 (60%), Positives = 348/460 (76%), Gaps = 0/460 (0%)
Query 4 DIAAADPTDTQPHLRRDLANRHIQLIAIGGAIGTGLFMGSGRTISLAGPAVMVVYGIIGF 63
+ A D + LRR+L NRHIQLIAIGGAIGTGLFMGSG+TISLAGP+++ VY IIGF
Sbjct 6 KVVADDQAPAEQSLRRNLTNRHIQLIAIGGAIGTGLFMGSGKTISLAGPSIIFVYMIIGF 65
Query 64 FVFFVLRAMGELLLSNLNYKSFVDFAADLRGPAAGFFVGWSYWFAWVVTGIADLVAITGY 123
+FFV+RAMGELLLSNL YKSF DFA+DL GP AG+F GW+YWF WVVTG+AD+VAIT Y
Sbjct 66 MLFFVMRAMGELLLSNLEYKSFSDFASDLLGPWAGYFTGWTYWFCWVVTGMADVVAITAY 125
Query 124 ARFWWPGLPIWVPALVTVALILAVNLFSVRHFGELEFWFALIKVAAIVCLIAVGAILVAT 183
A+FW+P L WV +L + L+L +NL +V+ FGE+EFWFA+IK+ AIV LI VG ++VA
Sbjct 126 AQFWFPDLSDWVASLAVIVLLLTLNLATVKMFGEMEFWFAMIKIVAIVSLIVVGLVMVAM 185
Query 184 NFVSPHGVHATIENLWNDNGFFPTGFLGVVSGFQIAFFAYIGVELVGTAAAETADPRRTL 243
+F SP GV A+ +LWND G+FP G G +GFQIA FA++G+ELVGT AAET DP ++L
Sbjct 186 HFQSPTGVEASFAHLWNDGGWFPKGLSGFFAGFQIAVFAFVGIELVGTTAAETKDPEKSL 245
Query 244 PRAINAVPLRVAVFYIGALLAILAVVPWRQFASGESPFVTMFSLAGLAAAASVVNFVVVT 303
PRAIN++P+R+ +FY+ AL+ I++V PW +SPFV +F L GL AAASV+NFVV+T
Sbjct 246 PRAINSIPIRIIMFYVFALIVIMSVTPWSSVVPEKSPFVELFVLVGLPAAASVINFVVLT 305
Query 304 AAASSANSGFFSTGRMLFGLADEGHAPAAFHQLNRGGVPAPALLLTAPLLLTSIPLLYAG 363
+AASSANSG FST RMLFGLA EG AP AF +L++ VPA L + LL + +LY
Sbjct 306 SAASSANSGVFSTSRMLFGLAQEGVAPKAFAKLSKRAVPAKGLTFSCICLLGGVVMLYVN 365
Query 364 RSVIGAFTLVTTVSSLLFMFVWAMIIISYLVYRRRHPQRHTDSVYKMPGGVVMCWAVLVF 423
SVIGAFT++TTVS++LFMFVW +I+ SYLVYR++ P H S+YKMP G +MCW + F
Sbjct 366 PSVIGAFTMITTVSAILFMFVWTIILCSYLVYRKQRPHLHEKSIYKMPLGKLMCWVCMAF 425
Query 424 FAFVIWTLTTETETATALAWFPLWFVLLAVGWLVTQRRQS 463
F FV+ LT E +T AL PLWF+ L +GWL ++++
Sbjct 426 FVFVVVLLTLEDDTRQALLVTPLWFIALGLGWLFIGKKRA 465
>gi|218707820|ref|YP_002415339.1| D-alanine/D-serine/glycine permease [Escherichia coli UMN026]
gi|293402835|ref|ZP_06646932.1| D-alanine/D-serine/glycine permease [Escherichia coli FVEC1412]
gi|298378364|ref|ZP_06988248.1| D-alanine/D-serine/glycine permease [Escherichia coli FVEC1302]
8 more sequence titles
Length=467
Score = 565 bits (1455), Expect = 9e-159, Method: Compositional matrix adjust.
Identities = 272/462 (59%), Positives = 348/462 (76%), Gaps = 0/462 (0%)
Query 4 DIAAADPTDTQPHLRRDLANRHIQLIAIGGAIGTGLFMGSGRTISLAGPAVMVVYGIIGF 63
+ A D + LRR+L NRHIQLIAIGGAIGTGLFMGSG+TISLAGP+++ VY IIGF
Sbjct 6 KVVADDQAPAEQSLRRNLTNRHIQLIAIGGAIGTGLFMGSGKTISLAGPSIIFVYMIIGF 65
Query 64 FVFFVLRAMGELLLSNLNYKSFVDFAADLRGPAAGFFVGWSYWFAWVVTGIADLVAITGY 123
+FFV+RAMGELLLSNL YKSF DFA+DL GP AG+F GW+YWF WVVTG+AD+VAIT Y
Sbjct 66 MLFFVMRAMGELLLSNLEYKSFSDFASDLLGPWAGYFTGWTYWFCWVVTGMADVVAITAY 125
Query 124 ARFWWPGLPIWVPALVTVALILAVNLFSVRHFGELEFWFALIKVAAIVCLIAVGAILVAT 183
A+FW+P L WV +L + L+L +NL +V+ FGE+EFWFA+IK+ AIV LI VG ++VA
Sbjct 126 AQFWFPDLSDWVASLAVIVLLLTLNLATVKMFGEMEFWFAMIKIVAIVSLIVVGLVMVAM 185
Query 184 NFVSPHGVHATIENLWNDNGFFPTGFLGVVSGFQIAFFAYIGVELVGTAAAETADPRRTL 243
+F SP GV A+ +LWND G+FP G G +GFQIA FA++G+ELVGT AAET DP ++L
Sbjct 186 HFQSPTGVEASFAHLWNDGGWFPKGLSGFFAGFQIAVFAFVGIELVGTTAAETKDPEKSL 245
Query 244 PRAINAVPLRVAVFYIGALLAILAVVPWRQFASGESPFVTMFSLAGLAAAASVVNFVVVT 303
PRAIN++P+R+ +FY+ AL+ I++V PW +SPFV +F L GL AAASV+NFVV+T
Sbjct 246 PRAINSIPIRIIMFYVFALIVIMSVTPWSSVVPEKSPFVELFVLVGLPAAASVINFVVLT 305
Query 304 AAASSANSGFFSTGRMLFGLADEGHAPAAFHQLNRGGVPAPALLLTAPLLLTSIPLLYAG 363
+AASSANSG FST RMLFGLA EG AP AF +L++ VPA L + LL + +LY
Sbjct 306 SAASSANSGVFSTSRMLFGLAQEGVAPKAFAKLSKRAVPAKGLTFSCICLLGGVVMLYVN 365
Query 364 RSVIGAFTLVTTVSSLLFMFVWAMIIISYLVYRRRHPQRHTDSVYKMPGGVVMCWAVLVF 423
SVIGAFT++TTVS++LFMFVW +I+ SYLVYR++ P H S+YKMP G +MCW + F
Sbjct 366 PSVIGAFTMITTVSAILFMFVWTIILCSYLVYRKQRPHLHDKSIYKMPLGKLMCWVCMAF 425
Query 424 FAFVIWTLTTETETATALAWFPLWFVLLAVGWLVTQRRQSRR 465
F FV+ LT E +T AL PLWF+ L +GWL +++ +
Sbjct 426 FVFVVVLLTLEDDTRQALLVTPLWFIALGLGWLFIGKKRMAK 467
>gi|24115479|ref|NP_709989.1| D-alanine/D-serine/glycine permease [Shigella flexneri 2a str.
301]
gi|30065499|ref|NP_839670.1| D-alanine/D-serine/glycine permease [Shigella flexneri 2a str.
2457T]
gi|24054801|gb|AAN45696.1| transport protein for D-alanine, D-serine, and glycine [Shigella
flexneri 2a str. 301]
9 more sequence titles
Length=470
Score = 565 bits (1455), Expect = 1e-158, Method: Compositional matrix adjust.
Identities = 271/460 (59%), Positives = 348/460 (76%), Gaps = 0/460 (0%)
Query 4 DIAAADPTDTQPHLRRDLANRHIQLIAIGGAIGTGLFMGSGRTISLAGPAVMVVYGIIGF 63
+ A D + LRR+L NRH+QLIAIGGAIGTGLFMGSG+TISLAGP+++ VY IIGF
Sbjct 6 KVVADDQAPAEQSLRRNLTNRHVQLIAIGGAIGTGLFMGSGKTISLAGPSIIFVYMIIGF 65
Query 64 FVFFVLRAMGELLLSNLNYKSFVDFAADLRGPAAGFFVGWSYWFAWVVTGIADLVAITGY 123
+FFV+RAMGELLLSNL YKSF DFA+DL GP AG+F GW+YWF WVVTG+AD+VAIT Y
Sbjct 66 MLFFVMRAMGELLLSNLEYKSFSDFASDLLGPWAGYFTGWTYWFCWVVTGMADVVAITAY 125
Query 124 ARFWWPGLPIWVPALVTVALILAVNLFSVRHFGELEFWFALIKVAAIVCLIAVGAILVAT 183
A+FW+P L WV +L + L+L +NL +V+ FGE+EFWFA+IK+ AIV LI VG ++VA
Sbjct 126 AQFWFPDLSDWVASLAVIVLLLTLNLATVKMFGEMEFWFAMIKIVAIVSLIVVGLVMVAM 185
Query 184 NFVSPHGVHATIENLWNDNGFFPTGFLGVVSGFQIAFFAYIGVELVGTAAAETADPRRTL 243
+F SP GV A+ +LWND G+FP G G +GFQIA FA++G+ELVGT AAET DP ++L
Sbjct 186 HFQSPTGVEASFAHLWNDGGWFPKGLSGFFAGFQIAVFAFVGIELVGTTAAETKDPEKSL 245
Query 244 PRAINAVPLRVAVFYIGALLAILAVVPWRQFASGESPFVTMFSLAGLAAAASVVNFVVVT 303
PRAIN++P+R+ +FY+ AL+ I++V PW +SPFV +F L GL AAASV+NFVV+T
Sbjct 246 PRAINSIPIRIIMFYVFALIVIMSVTPWSSVVPEKSPFVELFVLVGLPAAASVINFVVLT 305
Query 304 AAASSANSGFFSTGRMLFGLADEGHAPAAFHQLNRGGVPAPALLLTAPLLLTSIPLLYAG 363
+AASSANSG FST RMLFGLA EG AP AF +L++ VPA L + LL + +LY
Sbjct 306 SAASSANSGVFSTSRMLFGLAQEGVAPKAFAKLSKRAVPAKGLTFSCICLLGGVVMLYVN 365
Query 364 RSVIGAFTLVTTVSSLLFMFVWAMIIISYLVYRRRHPQRHTDSVYKMPGGVVMCWAVLVF 423
SVIGAFT++TTVS++LFMFVW +I+ SYLVYR++ P H S+YKMP G +MCW + F
Sbjct 366 PSVIGAFTMITTVSAILFMFVWTIILCSYLVYRKQRPHLHEKSIYKMPLGKLMCWVCMAF 425
Query 424 FAFVIWTLTTETETATALAWFPLWFVLLAVGWLVTQRRQS 463
F FV+ LT E +T AL PLWF+ L +GWL ++++
Sbjct 426 FVFVVVLLTLEDDTRQALLVTPLWFIALGLGWLFIGKKRA 465
>gi|26991520|ref|NP_746945.1| D-alanine/D-serine/glycine permease [Pseudomonas putida KT2440]
gi|24986602|gb|AAN70409.1|AE016682_11 D-serine/D-alanine/glycine transporter [Pseudomonas putida KT2440]
Length=468
Score = 565 bits (1455), Expect = 1e-158, Method: Compositional matrix adjust.
Identities = 279/457 (62%), Positives = 350/457 (77%), Gaps = 2/457 (0%)
Query 11 TDTQPHLRRDLANRHIQLIAIGGAIGTGLFMGSGRTISLAGPAVMVVYGIIGFFVFFVLR 70
TD +PHL+R+L NRHIQLIAIGGAIGTGLFMGSG+TISLAGP+++ VY IIGF +FFV+R
Sbjct 9 TD-EPHLQRNLTNRHIQLIAIGGAIGTGLFMGSGKTISLAGPSIIFVYMIIGFMLFFVMR 67
Query 71 AMGELLLSNLNYKSFVDFAADLRGPAAGFFVGWSYWFAWVVTGIADLVAITGYARFWWPG 130
AMGELLLSNLNYKSF+DF+ADL GP AG+F GW+YWF WVVTGIAD+VAI Y +FW+P
Sbjct 68 AMGELLLSNLNYKSFIDFSADLLGPWAGYFTGWTYWFCWVVTGIADVVAIAAYTQFWFPD 127
Query 131 LPIWVPALVTVALILAVNLFSVRHFGELEFWFALIKVAAIVCLIAVGAILVATNFVSPHG 190
LP W+PAL V L+L++NL +V+ FGELEFWFAL+K+ AI+ L+A G +V T F SP G
Sbjct 128 LPQWIPALTCVGLLLSLNLVTVKMFGELEFWFALVKIVAILGLVATGLYMVITGFTSPSG 187
Query 191 VHATIENLWNDNGFFPTGFLGVVSGFQIAFFAYIGVELVGTAAAETADPRRTLPRAINAV 250
A + NLWND G FP G +G +GFQIA FA++G+ELVGT AAE +P RTLPRAIN++
Sbjct 188 RTAQLANLWNDGGMFPHGLMGFFAGFQIAVFAFVGIELVGTTAAEAKNPERTLPRAINSI 247
Query 251 PLRVAVFYIGALLAILAVVPWRQFASGESPFVTMFSLAGLAAAASVVNFVVVTAAASSAN 310
P+R+ VFY+ AL+AI+AV PWR G+SPFV +F LAGL AAAS++NFVV+T+AASSAN
Sbjct 248 PIRIIVFYVLALIAIMAVTPWRDVVPGKSPFVELFVLAGLPAAASIINFVVLTSAASSAN 307
Query 311 SGFFSTGRMLFGLADEGHAPAAFHQLNRGGVPAPALLLTAPLLLTSIPLLYAGRSVIGAF 370
SG FST RML+GL+ EG AP AF +L+ VPA L + LL L+Y +V+ AF
Sbjct 308 SGVFSTSRMLYGLSQEGDAPKAFEKLSSRSVPANGLYFSCTCLLLGAVLIYLVPNVVEAF 367
Query 371 TLVTTVSSLLFMFVWAMIIISYLVYRRRHPQRHTDSVYKMPGGVVMCWAVLVFFAFVIWT 430
TLVTTVS++LFMFVW +I++SYL YR+ H S YKMPGG MC+ L FFAF++
Sbjct 368 TLVTTVSAVLFMFVWTLILLSYLKYRKDRAALHQASNYKMPGGRFMCYVCLSFFAFILVL 427
Query 431 LTTETETATALAWFPLWFVLLAVGW-LVTQRRQSRRS 466
L+ E +T +AL P+WFV+LAV + LV RR R +
Sbjct 428 LSLEADTRSALVVTPIWFVVLAVTYQLVRSRRHPRTA 464
>gi|300821311|ref|ZP_07101459.1| amino acid permease [Escherichia coli MS 119-7]
gi|300526200|gb|EFK47269.1| amino acid permease [Escherichia coli MS 119-7]
Length=470
Score = 565 bits (1455), Expect = 1e-158, Method: Compositional matrix adjust.
Identities = 273/460 (60%), Positives = 348/460 (76%), Gaps = 0/460 (0%)
Query 4 DIAAADPTDTQPHLRRDLANRHIQLIAIGGAIGTGLFMGSGRTISLAGPAVMVVYGIIGF 63
+ A D + LRR+L NRHIQLIAIGGAIGTGLFMGSG+TISLAGP+++ VY IIGF
Sbjct 6 KVVADDQAPAEQSLRRNLTNRHIQLIAIGGAIGTGLFMGSGKTISLAGPSIIFVYMIIGF 65
Query 64 FVFFVLRAMGELLLSNLNYKSFVDFAADLRGPAAGFFVGWSYWFAWVVTGIADLVAITGY 123
+FFV+RAMGELLLSNL YKSF DFA+DL GP AG+F GW+YWF WVVTG+AD+VAIT Y
Sbjct 66 MLFFVMRAMGELLLSNLEYKSFSDFASDLLGPWAGYFTGWTYWFCWVVTGMADVVAITAY 125
Query 124 ARFWWPGLPIWVPALVTVALILAVNLFSVRHFGELEFWFALIKVAAIVCLIAVGAILVAT 183
A+FW+P L WV +L + L+L +NL +V+ FGE+EFWFA+IK+ AIV LI VG ++VA
Sbjct 126 AQFWFPDLSDWVASLAVIVLLLTLNLATVKMFGEMEFWFAMIKIVAIVSLIVVGLVMVAM 185
Query 184 NFVSPHGVHATIENLWNDNGFFPTGFLGVVSGFQIAFFAYIGVELVGTAAAETADPRRTL 243
+F SP GV A+ +LWND G+FP G G +GFQIA FA++G+ELVGT AAET DP ++L
Sbjct 186 HFQSPTGVEASFAHLWNDGGWFPKGLSGFFAGFQIAVFAFVGIELVGTTAAETKDPEKSL 245
Query 244 PRAINAVPLRVAVFYIGALLAILAVVPWRQFASGESPFVTMFSLAGLAAAASVVNFVVVT 303
PRAIN++P+R+ +FY+ AL+ I++V PW +SPFV +F L GL AAASV+NFVV+T
Sbjct 246 PRAINSIPIRIIMFYVFALIVIMSVTPWSSVVPEKSPFVELFVLVGLPAAASVINFVVLT 305
Query 304 AAASSANSGFFSTGRMLFGLADEGHAPAAFHQLNRGGVPAPALLLTAPLLLTSIPLLYAG 363
+AASSANSG FST RMLFGLA EG AP AF +L++ VPA L + LL + +LY
Sbjct 306 SAASSANSGVFSTSRMLFGLAQEGVAPKAFAKLSKRAVPAKGLTFSCICLLGGVVMLYVN 365
Query 364 RSVIGAFTLVTTVSSLLFMFVWAMIIISYLVYRRRHPQRHTDSVYKMPGGVVMCWAVLVF 423
SVIGAFT++TTVS++LFMFVW +I+ SYLVYR++ P H S+YKMP G +MCW + F
Sbjct 366 PSVIGAFTMITTVSAILFMFVWTIILCSYLVYRKQRPHLHGKSIYKMPLGKLMCWVCMAF 425
Query 424 FAFVIWTLTTETETATALAWFPLWFVLLAVGWLVTQRRQS 463
F FVI LT E +T AL PLWF+ L +GWL ++++
Sbjct 426 FVFVIVLLTLEDDTRQALLVTPLWFIALGLGWLFIGKKRA 465
>gi|161505099|ref|YP_001572211.1| D-alanine/D-serine/glycine permease [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|160866446|gb|ABX23069.1| hypothetical protein SARI_03233 [Salmonella enterica subsp. arizonae
serovar 62:z4,z23:--]
Length=469
Score = 564 bits (1454), Expect = 1e-158, Method: Compositional matrix adjust.
Identities = 270/459 (59%), Positives = 349/459 (77%), Gaps = 0/459 (0%)
Query 4 DIAAADPTDTQPHLRRDLANRHIQLIAIGGAIGTGLFMGSGRTISLAGPAVMVVYGIIGF 63
+AA + + LRR+L NRHIQLIAIGGAIGTGLFMGSG+TISLAGP+++ VY IIGF
Sbjct 6 KVAADEQATAEQSLRRNLTNRHIQLIAIGGAIGTGLFMGSGKTISLAGPSIIFVYMIIGF 65
Query 64 FVFFVLRAMGELLLSNLNYKSFVDFAADLRGPAAGFFVGWSYWFAWVVTGIADLVAITGY 123
+FFV+RAMGELLLSNL YKSF DFA+DL GP AG+F GW+YWF WVVTG+AD+VAIT Y
Sbjct 66 MLFFVMRAMGELLLSNLEYKSFSDFASDLLGPWAGYFTGWTYWFCWVVTGMADVVAITAY 125
Query 124 ARFWWPGLPIWVPALVTVALILAVNLFSVRHFGELEFWFALIKVAAIVCLIAVGAILVAT 183
A+FW+PGL WV +L V L+L++NL +V+ FGE+EFWFA++K+ AIV LI VG +++A
Sbjct 126 AQFWFPGLSDWVASLAVVILLLSLNLATVKMFGEMEFWFAMVKIVAIVALIVVGLVMIAM 185
Query 184 NFVSPHGVHATIENLWNDNGFFPTGFLGVVSGFQIAFFAYIGVELVGTAAAETADPRRTL 243
+F SP GV A+ +LWND G+FP G G +GFQIA FA++G+ELVGT AAET DP ++L
Sbjct 186 HFKSPTGVEASFAHLWNDGGWFPKGISGFFAGFQIAVFAFVGIELVGTTAAETKDPEKSL 245
Query 244 PRAINAVPLRVAVFYIGALLAILAVVPWRQFASGESPFVTMFSLAGLAAAASVVNFVVVT 303
PRAIN++P+R+ +FY+ AL+ I++V PW +SPFV +F L GL AAASV+NFVV+T
Sbjct 246 PRAINSIPIRIIMFYVFALIVIMSVTPWSSVVPNKSPFVELFMLVGLPAAASVINFVVLT 305
Query 304 AAASSANSGFFSTGRMLFGLADEGHAPAAFHQLNRGGVPAPALLLTAPLLLTSIPLLYAG 363
+AASSANSG FST RMLFGLA EG AP AF +L++ VPA L + LL + +L
Sbjct 306 SAASSANSGVFSTSRMLFGLAQEGVAPKAFAKLSKRAVPAKGLTFSCICLLGGVVMLMVN 365
Query 364 RSVIGAFTLVTTVSSLLFMFVWAMIIISYLVYRRRHPQRHTDSVYKMPGGVVMCWAVLVF 423
SVIGAFT++TTVS++LFMFVW +I+ SYL YR++ P H S+YKMP G +MCW + F
Sbjct 366 PSVIGAFTMITTVSAILFMFVWTIILCSYLAYRKKRPHLHEKSIYKMPLGKLMCWVCMAF 425
Query 424 FAFVIWTLTTETETATALAWFPLWFVLLAVGWLVTQRRQ 462
F FV+ LT E +T AL PLWF+ L +GWL+ +++
Sbjct 426 FVFVLVLLTLEDDTRQALMVTPLWFIALGLGWLLIGKKR 464
>gi|323965602|gb|EGB61056.1| amino acid permease [Escherichia coli M863]
gi|327250155|gb|EGE61874.1| D-serine/D-alanine/glycine transporter [Escherichia coli STEC_7v]
Length=470
Score = 564 bits (1454), Expect = 1e-158, Method: Compositional matrix adjust.
Identities = 272/460 (60%), Positives = 347/460 (76%), Gaps = 0/460 (0%)
Query 4 DIAAADPTDTQPHLRRDLANRHIQLIAIGGAIGTGLFMGSGRTISLAGPAVMVVYGIIGF 63
+ A D + LRR+L NRHIQLIAIGGAIGTGLFMGSG+TISLAGP+++ VY IIGF
Sbjct 6 KVVADDQAPAEQSLRRNLTNRHIQLIAIGGAIGTGLFMGSGKTISLAGPSIIFVYMIIGF 65
Query 64 FVFFVLRAMGELLLSNLNYKSFVDFAADLRGPAAGFFVGWSYWFAWVVTGIADLVAITGY 123
+FFV+RAMGELLLSNL YKSF DFA+DL GP AG+F GW+YWF WVVTG+AD+VAIT Y
Sbjct 66 MLFFVMRAMGELLLSNLEYKSFSDFASDLLGPWAGYFTGWTYWFCWVVTGMADVVAITAY 125
Query 124 ARFWWPGLPIWVPALVTVALILAVNLFSVRHFGELEFWFALIKVAAIVCLIAVGAILVAT 183
A+FW+P L WV +L + L+L +NL +V+ FGE+EFWFA+IK+ AIV LI VG ++V
Sbjct 126 AQFWFPDLSDWVASLAVIVLLLTLNLATVKMFGEMEFWFAMIKIVAIVSLIVVGLVMVMM 185
Query 184 NFVSPHGVHATIENLWNDNGFFPTGFLGVVSGFQIAFFAYIGVELVGTAAAETADPRRTL 243
+F SP GV A+ +LWND G+FP G G +GFQIA FA++G+ELVGT AAET DP ++L
Sbjct 186 HFQSPTGVEASFAHLWNDGGWFPKGLSGFFAGFQIAVFAFVGIELVGTTAAETKDPEKSL 245
Query 244 PRAINAVPLRVAVFYIGALLAILAVVPWRQFASGESPFVTMFSLAGLAAAASVVNFVVVT 303
PRAIN++P+R+ +FY+ AL+ I++V PW +SPFV +F L GL AAASV+NFVV+T
Sbjct 246 PRAINSIPIRIIMFYVFALIVIMSVTPWSSVVPEKSPFVELFVLVGLPAAASVINFVVLT 305
Query 304 AAASSANSGFFSTGRMLFGLADEGHAPAAFHQLNRGGVPAPALLLTAPLLLTSIPLLYAG 363
+AASSANSG FST RMLFGLA EG AP AF +L++ VPA L + LL + +LY
Sbjct 306 SAASSANSGVFSTSRMLFGLAQEGVAPKAFAKLSKRAVPAKGLTFSCICLLGGVVMLYVN 365
Query 364 RSVIGAFTLVTTVSSLLFMFVWAMIIISYLVYRRRHPQRHTDSVYKMPGGVVMCWAVLVF 423
SVIGAFT++TTVS++LFMFVW +I+ SYLVYR++ P H S+YKMP G +MCW + F
Sbjct 366 PSVIGAFTMITTVSAILFMFVWTIILCSYLVYRKQRPHLHEKSIYKMPLGKLMCWVCMAF 425
Query 424 FAFVIWTLTTETETATALAWFPLWFVLLAVGWLVTQRRQS 463
F FVI LT E +T AL PLWF+ L +GWL ++++
Sbjct 426 FVFVIVLLTLEDDTRQALLVTPLWFIALGLGWLFIGKKRT 465
>gi|170723793|ref|YP_001751481.1| D-alanine/D-serine/glycine permease [Pseudomonas putida W619]
gi|169761796|gb|ACA75112.1| amino acid permease-associated region [Pseudomonas putida W619]
Length=468
Score = 564 bits (1454), Expect = 1e-158, Method: Compositional matrix adjust.
Identities = 277/459 (61%), Positives = 348/459 (76%), Gaps = 0/459 (0%)
Query 8 ADPTDTQPHLRRDLANRHIQLIAIGGAIGTGLFMGSGRTISLAGPAVMVVYGIIGFFVFF 67
+ P HL+R+L NRHIQLIAIGGAIGTGLFMGSG+TISLAGP+++ VY IIGF +FF
Sbjct 5 SSPPAQAQHLQRNLTNRHIQLIAIGGAIGTGLFMGSGKTISLAGPSIIFVYMIIGFMLFF 64
Query 68 VLRAMGELLLSNLNYKSFVDFAADLRGPAAGFFVGWSYWFAWVVTGIADLVAITGYARFW 127
V+RAMGELLLSNLNYKSF+DF+ADL GP AG+F GW+YWF WVVTGIAD+VAI Y +FW
Sbjct 65 VMRAMGELLLSNLNYKSFIDFSADLLGPWAGYFTGWTYWFCWVVTGIADVVAIAAYTQFW 124
Query 128 WPGLPIWVPALVTVALILAVNLFSVRHFGELEFWFALIKVAAIVCLIAVGAILVATNFVS 187
+P LP W+PAL VA++L++NL +V+ FGE+EFWFALIK+ AI+ L+A G +V T F S
Sbjct 125 FPDLPQWIPALTCVAVLLSLNLVTVKMFGEMEFWFALIKIVAILGLVATGLYMVITGFES 184
Query 188 PHGVHATIENLWNDNGFFPTGFLGVVSGFQIAFFAYIGVELVGTAAAETADPRRTLPRAI 247
P G A + NLWND G FP G +G +GFQIA FA++G+ELVGT AAE +P RTLPRAI
Sbjct 185 PSGRTAQLANLWNDGGMFPNGLMGFFAGFQIAVFAFVGIELVGTTAAEAKNPERTLPRAI 244
Query 248 NAVPLRVAVFYIGALLAILAVVPWRQFASGESPFVTMFSLAGLAAAASVVNFVVVTAAAS 307
N++P+R+ VFY+ AL+AI+AV PWR G+SPFV +F LAGL AAAS++NFVV+T+AAS
Sbjct 245 NSIPIRIIVFYVLALIAIMAVTPWRDVVPGKSPFVELFVLAGLPAAASIINFVVLTSAAS 304
Query 308 SANSGFFSTGRMLFGLADEGHAPAAFHQLNRGGVPAPALLLTAPLLLTSIPLLYAGRSVI 367
SANSG FST RMLFGLA EG AP AF +L+ VPA L + LL L+Y +VI
Sbjct 305 SANSGVFSTSRMLFGLAQEGDAPRAFEKLSSRAVPANGLYFSCTCLLLGAVLIYMVPNVI 364
Query 368 GAFTLVTTVSSLLFMFVWAMIIISYLVYRRRHPQRHTDSVYKMPGGVVMCWAVLVFFAFV 427
AFTLVTTVS++LFMFVW +I++SYL YR+ H S YKMPGG MC+ L FFAF+
Sbjct 365 EAFTLVTTVSAVLFMFVWTLILLSYLKYRKTRAALHQASTYKMPGGRFMCYVCLAFFAFI 424
Query 428 IWTLTTETETATALAWFPLWFVLLAVGWLVTQRRQSRRS 466
+ L+ E +T +AL P+WFVLLAV + + ++ R+
Sbjct 425 LVLLSLEADTRSALIVTPIWFVLLAVTYQGVRSKRHPRT 463
>gi|218702910|ref|YP_002410539.1| D-alanine/D-serine/glycine permease [Escherichia coli IAI39]
gi|218372896|emb|CAR20776.1| D-alanine/D-serine/glycine transporter [Escherichia coli IAI39]
Length=467
Score = 564 bits (1453), Expect = 2e-158, Method: Compositional matrix adjust.
Identities = 271/462 (59%), Positives = 348/462 (76%), Gaps = 0/462 (0%)
Query 4 DIAAADPTDTQPHLRRDLANRHIQLIAIGGAIGTGLFMGSGRTISLAGPAVMVVYGIIGF 63
+ A D + LRR+L NRHIQLIAIGGAIGTGLFMGSG+TISLAGP+++ VY IIGF
Sbjct 6 KVVADDQAPAEQSLRRNLTNRHIQLIAIGGAIGTGLFMGSGKTISLAGPSIIFVYMIIGF 65
Query 64 FVFFVLRAMGELLLSNLNYKSFVDFAADLRGPAAGFFVGWSYWFAWVVTGIADLVAITGY 123
+FFV+RAMGELLLSNL YKSF DFA+DL GP AG+F GW+YWF WVVTG+AD+VAIT Y
Sbjct 66 MLFFVMRAMGELLLSNLEYKSFSDFASDLLGPWAGYFTGWTYWFCWVVTGMADVVAITAY 125
Query 124 ARFWWPGLPIWVPALVTVALILAVNLFSVRHFGELEFWFALIKVAAIVCLIAVGAILVAT 183
A+FW+P L WV +L + L+L +NL +V+ FGE+EFWFA+IK+ AIV LI VG ++VA
Sbjct 126 AQFWFPDLSDWVASLAVIVLLLTLNLATVKMFGEMEFWFAMIKIVAIVSLIVVGLVMVAM 185
Query 184 NFVSPHGVHATIENLWNDNGFFPTGFLGVVSGFQIAFFAYIGVELVGTAAAETADPRRTL 243
+F SP GV A+ +LWND G+FP G G +GFQIA FA++G+ELVGT AAET DP ++L
Sbjct 186 HFQSPTGVEASFAHLWNDGGWFPKGLSGFFAGFQIAVFAFVGIELVGTTAAETKDPEKSL 245
Query 244 PRAINAVPLRVAVFYIGALLAILAVVPWRQFASGESPFVTMFSLAGLAAAASVVNFVVVT 303
PRAIN++P+R+ +FY+ +L+ I++V PW +SPFV +F L GL AAASV+NFVV+T
Sbjct 246 PRAINSIPIRIIMFYVFSLIVIMSVTPWSSVVPEKSPFVELFVLVGLPAAASVINFVVLT 305
Query 304 AAASSANSGFFSTGRMLFGLADEGHAPAAFHQLNRGGVPAPALLLTAPLLLTSIPLLYAG 363
+AASSANSG FST RMLFGLA EG AP AF +L++ VPA L + LL + +LY
Sbjct 306 SAASSANSGVFSTSRMLFGLAQEGVAPKAFAKLSKRAVPAKGLTFSCICLLGGVVMLYVN 365
Query 364 RSVIGAFTLVTTVSSLLFMFVWAMIIISYLVYRRRHPQRHTDSVYKMPGGVVMCWAVLVF 423
SVIGAFT++TTVS++LFMFVW +I+ SYLVYR++ P H S+YKMP G +MCW + F
Sbjct 366 PSVIGAFTMITTVSAILFMFVWTIILCSYLVYRKQRPHLHEKSIYKMPLGKLMCWVCMAF 425
Query 424 FAFVIWTLTTETETATALAWFPLWFVLLAVGWLVTQRRQSRR 465
F FV+ LT E +T AL PLWF+ L +GWL +++ +
Sbjct 426 FVFVLVLLTLEDDTRQALLVTPLWFIALGLGWLFIGKKRMAK 467
>gi|62182842|ref|YP_219259.1| D-alanine/D-serine/glycine permease [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|62130475|gb|AAX68178.1| APC family, D-alanine/D-serine/glycine transport protein [Salmonella
enterica subsp. enterica serovar Choleraesuis str. SC-B67]
gi|322717344|gb|EFZ08915.1| D-alanine/D-serine/glycine permease [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SCSA50]
Length=467
Score = 564 bits (1453), Expect = 2e-158, Method: Compositional matrix adjust.
Identities = 271/459 (60%), Positives = 349/459 (77%), Gaps = 0/459 (0%)
Query 4 DIAAADPTDTQPHLRRDLANRHIQLIAIGGAIGTGLFMGSGRTISLAGPAVMVVYGIIGF 63
+AA + + LRR+L NRHIQLIAIGGAIGTGLFMGSG+TISLAGP+++ VY IIGF
Sbjct 6 KVAADEQAPAEQSLRRNLTNRHIQLIAIGGAIGTGLFMGSGKTISLAGPSIIFVYMIIGF 65
Query 64 FVFFVLRAMGELLLSNLNYKSFVDFAADLRGPAAGFFVGWSYWFAWVVTGIADLVAITGY 123
+FFV+RAMGELLLSNL YKSF DFA+DL GP AG+F GW+YWF WVVTG+ D+VAIT Y
Sbjct 66 MLFFVMRAMGELLLSNLEYKSFSDFASDLLGPWAGYFTGWTYWFCWVVTGMVDVVAITAY 125
Query 124 ARFWWPGLPIWVPALVTVALILAVNLFSVRHFGELEFWFALIKVAAIVCLIAVGAILVAT 183
A+FW+PGL WV +L V L+L++NL +V+ FGE+EFWFA++K+ AIV LI VG +++A
Sbjct 126 AQFWFPGLSDWVASLAVVILLLSLNLATVKMFGEMEFWFAMVKIVAIVALIVVGLVMIAM 185
Query 184 NFVSPHGVHATIENLWNDNGFFPTGFLGVVSGFQIAFFAYIGVELVGTAAAETADPRRTL 243
+F SP GV A+ +LWND G+FP G G +GFQIA FA++G+ELVGT AAET DP ++L
Sbjct 186 HFKSPTGVEASFAHLWNDGGWFPKGISGFFAGFQIAVFAFVGIELVGTTAAETKDPEKSL 245
Query 244 PRAINAVPLRVAVFYIGALLAILAVVPWRQFASGESPFVTMFSLAGLAAAASVVNFVVVT 303
PRAIN++P+R+ +FY+ AL+ I++V PW +SPFV +F L GL AAASV+NFVV+T
Sbjct 246 PRAINSIPIRIIMFYVFALIVIMSVTPWSSVVPDKSPFVELFVLVGLPAAASVINFVVLT 305
Query 304 AAASSANSGFFSTGRMLFGLADEGHAPAAFHQLNRGGVPAPALLLTAPLLLTSIPLLYAG 363
+AASSANSG FST RMLFGLA EG AP AF +L++ VPA L + LL + +L
Sbjct 306 SAASSANSGVFSTSRMLFGLAQEGVAPKAFAKLSKRAVPAKGLTFSCICLLGGVVMLMVN 365
Query 364 RSVIGAFTLVTTVSSLLFMFVWAMIIISYLVYRRRHPQRHTDSVYKMPGGVVMCWAVLVF 423
SVIGAFT++TTVS++LFMFVW +I+ SYLVYR++ P H S+YKMP G +MCW + F
Sbjct 366 PSVIGAFTMITTVSAILFMFVWTIILCSYLVYRKKRPHLHEKSIYKMPLGKLMCWVCMAF 425
Query 424 FAFVIWTLTTETETATALAWFPLWFVLLAVGWLVTQRRQ 462
FAFV+ LT E +T AL PLWF+ L +GWL ++ +
Sbjct 426 FAFVLVLLTLEDDTRQALIVTPLWFIALGLGWLFLRKNK 464
Lambda K H
0.328 0.140 0.444
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1237758672258
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40