BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1705c Length=385 Score E Sequences producing significant alignments: (Bits) Value gi|57116898|ref|YP_177827.1| PPE family protein [Mycobacterium t... 739 0.0 gi|31792891|ref|NP_855384.1| PPE family protein [Mycobacterium b... 738 0.0 gi|254550715|ref|ZP_05141162.1| PPE family protein [Mycobacteriu... 737 0.0 gi|15841163|ref|NP_336200.1| PPE family protein [Mycobacterium t... 737 0.0 gi|289745858|ref|ZP_06505236.1| PPE family protein [Mycobacteriu... 736 0.0 gi|340626711|ref|YP_004745163.1| PPE family protein [Mycobacteri... 735 0.0 gi|121637612|ref|YP_977835.1| PPE family protein [Mycobacterium ... 734 0.0 gi|307079711|ref|ZP_07488881.1| PPE family protein [Mycobacteriu... 697 0.0 gi|167969175|ref|ZP_02551452.1| PPE family protein [Mycobacteriu... 637 0.0 gi|289574372|ref|ZP_06454599.1| PPE family protein [Mycobacteriu... 634 8e-180 gi|240170165|ref|ZP_04748824.1| PPE family protein [Mycobacteriu... 422 4e-116 gi|118617327|ref|YP_905659.1| PPE family protein [Mycobacterium ... 409 4e-112 gi|183982531|ref|YP_001850822.1| PPE family protein [Mycobacteri... 397 2e-108 gi|289757814|ref|ZP_06517192.1| predicted protein [Mycobacterium... 353 2e-95 gi|183981114|ref|YP_001849405.1| PPE family protein [Mycobacteri... 339 4e-91 gi|118616629|ref|YP_904961.1| PPE family protein [Mycobacterium ... 337 2e-90 gi|240171969|ref|ZP_04750628.1| PPE family protein [Mycobacteriu... 336 5e-90 gi|240167786|ref|ZP_04746445.1| PPE family protein [Mycobacteriu... 316 4e-84 gi|296167733|ref|ZP_06849950.1| PPE family protein [Mycobacteriu... 313 3e-83 gi|183981917|ref|YP_001850208.1| PPE family protein [Mycobacteri... 293 3e-77 gi|289761860|ref|ZP_06521238.1| PPE family protein [Mycobacteriu... 291 2e-76 gi|254364621|ref|ZP_04980667.1| PPE family protein [Mycobacteriu... 285 9e-75 gi|212596789|gb|ACJ35606.1| PPE45 [Mycobacterium intracellulare ... 276 3e-72 gi|340626801|ref|YP_004745253.1| PPE family protein [Mycobacteri... 273 3e-71 gi|289569854|ref|ZP_06450081.1| PPE family protein [Mycobacteriu... 269 7e-70 gi|289745779|ref|ZP_06505157.1| PPE family protein [Mycobacteriu... 269 7e-70 gi|57116911|ref|YP_177835.1| PPE family protein [Mycobacterium t... 269 7e-70 gi|15841257|ref|NP_336294.1| PPE family protein [Mycobacterium t... 269 8e-70 gi|31792977|ref|NP_855470.1| PPE family protein [Mycobacterium b... 267 3e-69 gi|240172861|ref|ZP_04751520.1| PPE family protein, PPE31 [Mycob... 253 4e-65 gi|254821314|ref|ZP_05226315.1| PPE family protein [Mycobacteriu... 252 6e-65 gi|240172022|ref|ZP_04750681.1| PPE family protein [Mycobacteriu... 249 7e-64 gi|240171295|ref|ZP_04749954.1| PPE family protein [Mycobacteriu... 246 4e-63 gi|183982678|ref|YP_001850969.1| PPE family protein, PPE26 [Myco... 243 3e-62 gi|342861307|ref|ZP_08717955.1| PPE family protein [Mycobacteriu... 241 2e-61 gi|148661613|ref|YP_001283136.1| PPE family protein [Mycobacteri... 239 5e-61 gi|118618470|ref|YP_906802.1| PPE family protein [Mycobacterium ... 239 5e-61 gi|57116920|ref|YP_177653.1| PPE family protein [Mycobacterium t... 239 7e-61 gi|183981478|ref|YP_001849769.1| PPE family protein [Mycobacteri... 239 7e-61 gi|342861308|ref|ZP_08717956.1| PPE family protein [Mycobacteriu... 238 1e-60 gi|31792996|ref|NP_855489.1| PPE family protein [Mycobacterium b... 234 2e-59 gi|306776024|ref|ZP_07414361.1| PPE family protein [Mycobacteriu... 233 5e-59 gi|289447421|ref|ZP_06437165.1| PPE family protein [Mycobacteriu... 233 5e-59 gi|289761957|ref|ZP_06521335.1| predicted protein [Mycobacterium... 233 5e-59 gi|15841277|ref|NP_336314.1| PPE family protein [Mycobacterium t... 233 5e-59 gi|326903411|gb|EGE50344.1| LOW QUALITY PROTEIN: PPE family prot... 233 5e-59 gi|341601736|emb|CCC64409.1| PPE family protein [Mycobacterium b... 232 9e-59 gi|289574484|ref|ZP_06454711.1| PPE family protein [Mycobacteriu... 231 1e-58 gi|254821012|ref|ZP_05226013.1| PPE family protein, PPE31 [Mycob... 230 4e-58 gi|340627882|ref|YP_004746334.1| PPE family protein [Mycobacteri... 229 7e-58 >gi|57116898|ref|YP_177827.1| PPE family protein [Mycobacterium tuberculosis H37Rv] gi|148661502|ref|YP_001283025.1| PPE family protein [Mycobacterium tuberculosis H37Ra] gi|148822911|ref|YP_001287665.1| PPE family protein [Mycobacterium tuberculosis F11] 39 more sequence titles Length=385 Score = 739 bits (1908), Expect = 0.0, Method: Compositional matrix adjust. Identities = 385/385 (100%), Positives = 385/385 (100%), Gaps = 0/385 (0%) Query 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP Sbjct 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60 Query 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL Sbjct 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120 Query 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA Sbjct 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180 Query 181 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLTSPLSSALTAAATPGWLEWFINWYL 240 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLTSPLSSALTAAATPGWLEWFINWYL Sbjct 181 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLTSPLSSALTAAATPGWLEWFINWYL 240 Query 241 PISQLFYNTVGLPYFAIGIGNSLITSWRALGWIGPEAAEAAAAAPAAVGAAVGGTGPVSA 300 PISQLFYNTVGLPYFAIGIGNSLITSWRALGWIGPEAAEAAAAAPAAVGAAVGGTGPVSA Sbjct 241 PISQLFYNTVGLPYFAIGIGNSLITSWRALGWIGPEAAEAAAAAPAAVGAAVGGTGPVSA 300 Query 301 GLGNAATIGKLSLPPNWAGASPSLAPTVGSASAPLVSDIVEQPEAGAAGNLLGGMPLAGS 360 GLGNAATIGKLSLPPNWAGASPSLAPTVGSASAPLVSDIVEQPEAGAAGNLLGGMPLAGS Sbjct 301 GLGNAATIGKLSLPPNWAGASPSLAPTVGSASAPLVSDIVEQPEAGAAGNLLGGMPLAGS 360 Query 361 GTGTGGAGPRYGFRVTVMSRPPFAG 385 GTGTGGAGPRYGFRVTVMSRPPFAG Sbjct 361 GTGTGGAGPRYGFRVTVMSRPPFAG 385 >gi|31792891|ref|NP_855384.1| PPE family protein [Mycobacterium bovis AF2122/97] gi|224990087|ref|YP_002644774.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|289443162|ref|ZP_06432906.1| PPE family protein [Mycobacterium tuberculosis T46] 18 more sequence titles Length=385 Score = 738 bits (1905), Expect = 0.0, Method: Compositional matrix adjust. Identities = 384/385 (99%), Positives = 385/385 (100%), Gaps = 0/385 (0%) Query 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP Sbjct 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60 Query 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL Sbjct 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120 Query 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA Sbjct 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180 Query 181 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLTSPLSSALTAAATPGWLEWFINWYL 240 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLTSPLSSALTAAATPGWLEWFINWYL Sbjct 181 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLTSPLSSALTAAATPGWLEWFINWYL 240 Query 241 PISQLFYNTVGLPYFAIGIGNSLITSWRALGWIGPEAAEAAAAAPAAVGAAVGGTGPVSA 300 PISQLFYNTVGLPYFAIGIGNSLITSWRALGWIGPEAAEAAAAAPAAVGAAVGGTGPVSA Sbjct 241 PISQLFYNTVGLPYFAIGIGNSLITSWRALGWIGPEAAEAAAAAPAAVGAAVGGTGPVSA 300 Query 301 GLGNAATIGKLSLPPNWAGASPSLAPTVGSASAPLVSDIVEQPEAGAAGNLLGGMPLAGS 360 GLGNAATIGKLS+PPNWAGASPSLAPTVGSASAPLVSDIVEQPEAGAAGNLLGGMPLAGS Sbjct 301 GLGNAATIGKLSVPPNWAGASPSLAPTVGSASAPLVSDIVEQPEAGAAGNLLGGMPLAGS 360 Query 361 GTGTGGAGPRYGFRVTVMSRPPFAG 385 GTGTGGAGPRYGFRVTVMSRPPFAG Sbjct 361 GTGTGGAGPRYGFRVTVMSRPPFAG 385 >gi|254550715|ref|ZP_05141162.1| PPE family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] Length=385 Score = 737 bits (1902), Expect = 0.0, Method: Compositional matrix adjust. Identities = 384/385 (99%), Positives = 384/385 (99%), Gaps = 0/385 (0%) Query 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP Sbjct 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60 Query 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL Sbjct 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120 Query 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA Sbjct 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180 Query 181 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLTSPLSSALTAAATPGWLEWFINWYL 240 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLTSPLSSALTAAATPGWLEWFINWYL Sbjct 181 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLTSPLSSALTAAATPGWLEWFINWYL 240 Query 241 PISQLFYNTVGLPYFAIGIGNSLITSWRALGWIGPEAAEAAAAAPAAVGAAVGGTGPVSA 300 PISQLFYNTVGLPYFA GIGNSLITSWRALGWIGPEAAEAAAAAPAAVGAAVGGTGPVSA Sbjct 241 PISQLFYNTVGLPYFATGIGNSLITSWRALGWIGPEAAEAAAAAPAAVGAAVGGTGPVSA 300 Query 301 GLGNAATIGKLSLPPNWAGASPSLAPTVGSASAPLVSDIVEQPEAGAAGNLLGGMPLAGS 360 GLGNAATIGKLSLPPNWAGASPSLAPTVGSASAPLVSDIVEQPEAGAAGNLLGGMPLAGS Sbjct 301 GLGNAATIGKLSLPPNWAGASPSLAPTVGSASAPLVSDIVEQPEAGAAGNLLGGMPLAGS 360 Query 361 GTGTGGAGPRYGFRVTVMSRPPFAG 385 GTGTGGAGPRYGFRVTVMSRPPFAG Sbjct 361 GTGTGGAGPRYGFRVTVMSRPPFAG 385 >gi|15841163|ref|NP_336200.1| PPE family protein [Mycobacterium tuberculosis CDC1551] gi|13881383|gb|AAK46014.1| PPE family protein [Mycobacterium tuberculosis CDC1551] gi|323719795|gb|EGB28909.1| PPE family protein [Mycobacterium tuberculosis CDC1551A] Length=385 Score = 737 bits (1902), Expect = 0.0, Method: Compositional matrix adjust. Identities = 384/385 (99%), Positives = 384/385 (99%), Gaps = 0/385 (0%) Query 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP Sbjct 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60 Query 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL Sbjct 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120 Query 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA Sbjct 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180 Query 181 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLTSPLSSALTAAATPGWLEWFINWYL 240 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLTSPLSSALTAAATPGWLEWFINWYL Sbjct 181 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLTSPLSSALTAAATPGWLEWFINWYL 240 Query 241 PISQLFYNTVGLPYFAIGIGNSLITSWRALGWIGPEAAEAAAAAPAAVGAAVGGTGPVSA 300 PISQLFYNTVGLPYFAIGIGNSLITSWRALGWIGPEAAEAAAAAPAAVGAAVGGTGPVSA Sbjct 241 PISQLFYNTVGLPYFAIGIGNSLITSWRALGWIGPEAAEAAAAAPAAVGAAVGGTGPVSA 300 Query 301 GLGNAATIGKLSLPPNWAGASPSLAPTVGSASAPLVSDIVEQPEAGAAGNLLGGMPLAGS 360 GLGNAATIGKLSLPPNWAGASPSLAPTVGSASAPLVSDIVEQPEAGAAGNLLGGMPLAGS Sbjct 301 GLGNAATIGKLSLPPNWAGASPSLAPTVGSASAPLVSDIVEQPEAGAAGNLLGGMPLAGS 360 Query 361 GTGTGGAGPRYGFRVTVMSRPPFAG 385 GTG GGAGPRYGFRVTVMSRPPFAG Sbjct 361 GTGMGGAGPRYGFRVTVMSRPPFAG 385 >gi|289745858|ref|ZP_06505236.1| PPE family protein [Mycobacterium tuberculosis 02_1987] gi|289686386|gb|EFD53874.1| PPE family protein [Mycobacterium tuberculosis 02_1987] Length=385 Score = 736 bits (1900), Expect = 0.0, Method: Compositional matrix adjust. Identities = 383/385 (99%), Positives = 385/385 (100%), Gaps = 0/385 (0%) Query 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP Sbjct 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60 Query 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL Sbjct 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120 Query 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180 VTHNVFGQNTASIAATEAQYAEMWAQDAMAM+GYAGSSATATKVTPFAPPPNTTSPSAAA Sbjct 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMHGYAGSSATATKVTPFAPPPNTTSPSAAA 180 Query 181 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLTSPLSSALTAAATPGWLEWFINWYL 240 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLTSPLSSALTAAATPGWLEWFINWYL Sbjct 181 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLTSPLSSALTAAATPGWLEWFINWYL 240 Query 241 PISQLFYNTVGLPYFAIGIGNSLITSWRALGWIGPEAAEAAAAAPAAVGAAVGGTGPVSA 300 PISQLFYNTVGLPYFAIGIGNSLITSWRALGWIGPEAAEAAAAAPAAVGAAVGGTGPVSA Sbjct 241 PISQLFYNTVGLPYFAIGIGNSLITSWRALGWIGPEAAEAAAAAPAAVGAAVGGTGPVSA 300 Query 301 GLGNAATIGKLSLPPNWAGASPSLAPTVGSASAPLVSDIVEQPEAGAAGNLLGGMPLAGS 360 GLGNAATIGKLS+PPNWAGASPSLAPTVGSASAPLVSDIVEQPEAGAAGNLLGGMPLAGS Sbjct 301 GLGNAATIGKLSVPPNWAGASPSLAPTVGSASAPLVSDIVEQPEAGAAGNLLGGMPLAGS 360 Query 361 GTGTGGAGPRYGFRVTVMSRPPFAG 385 GTGTGGAGPRYGFRVTVMSRPPFAG Sbjct 361 GTGTGGAGPRYGFRVTVMSRPPFAG 385 >gi|340626711|ref|YP_004745163.1| PPE family protein [Mycobacterium canettii CIPT 140010059] gi|340004901|emb|CCC44047.1| PPE family protein [Mycobacterium canettii CIPT 140010059] Length=385 Score = 735 bits (1898), Expect = 0.0, Method: Compositional matrix adjust. Identities = 383/385 (99%), Positives = 384/385 (99%), Gaps = 0/385 (0%) Query 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP Sbjct 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60 Query 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL Sbjct 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120 Query 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA Sbjct 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180 Query 181 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLTSPLSSALTAAATPGWLEWFINWYL 240 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLTSPLSSALTAAATPGWLEWFINWYL Sbjct 181 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLTSPLSSALTAAATPGWLEWFINWYL 240 Query 241 PISQLFYNTVGLPYFAIGIGNSLITSWRALGWIGPEAAEAAAAAPAAVGAAVGGTGPVSA 300 PISQLFYNTVGLPYFAIGIGNSLITSWRALGWIGPEAAEAAAAAPAAVGAAVGGTGPVSA Sbjct 241 PISQLFYNTVGLPYFAIGIGNSLITSWRALGWIGPEAAEAAAAAPAAVGAAVGGTGPVSA 300 Query 301 GLGNAATIGKLSLPPNWAGASPSLAPTVGSASAPLVSDIVEQPEAGAAGNLLGGMPLAGS 360 GLGNAATIGKLS+PPNWAGASPSLAPTVGSASAPLVSDIVEQPEAGAAGNLLGGMPLAG Sbjct 301 GLGNAATIGKLSVPPNWAGASPSLAPTVGSASAPLVSDIVEQPEAGAAGNLLGGMPLAGP 360 Query 361 GTGTGGAGPRYGFRVTVMSRPPFAG 385 GTGTGGAGPRYGFRVTVMSRPPFAG Sbjct 361 GTGTGGAGPRYGFRVTVMSRPPFAG 385 >gi|121637612|ref|YP_977835.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|121493259|emb|CAL71730.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] Length=385 Score = 734 bits (1895), Expect = 0.0, Method: Compositional matrix adjust. Identities = 383/385 (99%), Positives = 384/385 (99%), Gaps = 0/385 (0%) Query 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60 M FGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP Sbjct 1 MAFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60 Query 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL Sbjct 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120 Query 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA Sbjct 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180 Query 181 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLTSPLSSALTAAATPGWLEWFINWYL 240 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLTSPLSSALTAAATPGWLEWFINWYL Sbjct 181 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLTSPLSSALTAAATPGWLEWFINWYL 240 Query 241 PISQLFYNTVGLPYFAIGIGNSLITSWRALGWIGPEAAEAAAAAPAAVGAAVGGTGPVSA 300 PISQLFYNTVGLPYFAIGIGNSLITSWRALGWIGPEAAEAAAAAPAAVGAAVGGTGPVSA Sbjct 241 PISQLFYNTVGLPYFAIGIGNSLITSWRALGWIGPEAAEAAAAAPAAVGAAVGGTGPVSA 300 Query 301 GLGNAATIGKLSLPPNWAGASPSLAPTVGSASAPLVSDIVEQPEAGAAGNLLGGMPLAGS 360 GLGNAATIGKLS+PPNWAGASPSLAPTVGSASAPLVSDIVEQPEAGAAGNLLGGMPLAGS Sbjct 301 GLGNAATIGKLSVPPNWAGASPSLAPTVGSASAPLVSDIVEQPEAGAAGNLLGGMPLAGS 360 Query 361 GTGTGGAGPRYGFRVTVMSRPPFAG 385 GTGTGGAGPRYGFRVTVMSRPPFAG Sbjct 361 GTGTGGAGPRYGFRVTVMSRPPFAG 385 >gi|307079711|ref|ZP_07488881.1| PPE family protein [Mycobacterium tuberculosis SUMu011] gi|308362459|gb|EFP51310.1| PPE family protein [Mycobacterium tuberculosis SUMu011] Length=376 Score = 697 bits (1799), Expect = 0.0, Method: Compositional matrix adjust. Identities = 365/365 (100%), Positives = 365/365 (100%), Gaps = 0/365 (0%) Query 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP Sbjct 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60 Query 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL Sbjct 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120 Query 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA Sbjct 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180 Query 181 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLTSPLSSALTAAATPGWLEWFINWYL 240 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLTSPLSSALTAAATPGWLEWFINWYL Sbjct 181 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLTSPLSSALTAAATPGWLEWFINWYL 240 Query 241 PISQLFYNTVGLPYFAIGIGNSLITSWRALGWIGPEAAEAAAAAPAAVGAAVGGTGPVSA 300 PISQLFYNTVGLPYFAIGIGNSLITSWRALGWIGPEAAEAAAAAPAAVGAAVGGTGPVSA Sbjct 241 PISQLFYNTVGLPYFAIGIGNSLITSWRALGWIGPEAAEAAAAAPAAVGAAVGGTGPVSA 300 Query 301 GLGNAATIGKLSLPPNWAGASPSLAPTVGSASAPLVSDIVEQPEAGAAGNLLGGMPLAGS 360 GLGNAATIGKLSLPPNWAGASPSLAPTVGSASAPLVSDIVEQPEAGAAGNLLGGMPLAGS Sbjct 301 GLGNAATIGKLSLPPNWAGASPSLAPTVGSASAPLVSDIVEQPEAGAAGNLLGGMPLAGS 360 Query 361 GTGTG 365 GTGTG Sbjct 361 GTGTG 365 >gi|167969175|ref|ZP_02551452.1| PPE family protein [Mycobacterium tuberculosis H37Ra] Length=356 Score = 637 bits (1644), Expect = 0.0, Method: Compositional matrix adjust. Identities = 334/334 (100%), Positives = 334/334 (100%), Gaps = 0/334 (0%) Query 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP Sbjct 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60 Query 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL Sbjct 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120 Query 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA Sbjct 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180 Query 181 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLTSPLSSALTAAATPGWLEWFINWYL 240 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLTSPLSSALTAAATPGWLEWFINWYL Sbjct 181 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLTSPLSSALTAAATPGWLEWFINWYL 240 Query 241 PISQLFYNTVGLPYFAIGIGNSLITSWRALGWIGPEAAEAAAAAPAAVGAAVGGTGPVSA 300 PISQLFYNTVGLPYFAIGIGNSLITSWRALGWIGPEAAEAAAAAPAAVGAAVGGTGPVSA Sbjct 241 PISQLFYNTVGLPYFAIGIGNSLITSWRALGWIGPEAAEAAAAAPAAVGAAVGGTGPVSA 300 Query 301 GLGNAATIGKLSLPPNWAGASPSLAPTVGSASAP 334 GLGNAATIGKLSLPPNWAGASPSLAPTVGSASAP Sbjct 301 GLGNAATIGKLSLPPNWAGASPSLAPTVGSASAP 334 >gi|289574372|ref|ZP_06454599.1| PPE family protein [Mycobacterium tuberculosis K85] gi|289538803|gb|EFD43381.1| PPE family protein [Mycobacterium tuberculosis K85] Length=384 Score = 634 bits (1635), Expect = 8e-180, Method: Compositional matrix adjust. Identities = 369/385 (96%), Positives = 371/385 (97%), Gaps = 1/385 (0%) Query 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP Sbjct 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60 Query 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL Sbjct 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120 Query 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA Sbjct 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180 Query 181 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLTSPLSSALTAAATPGWLEWFINWYL 240 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLTSPLSSALTAAATPGWLEWFINWYL Sbjct 181 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLTSPLSSALTAAATPGWLEWFINWYL 240 Query 241 PISQLFYNTVGLPYFAIGIGNSLITSWRALGWIGPEAAEAAAAAPAAVGAAVGGTGPVSA 300 PISQLFYNTVGLPYFAIGIGNSLITSWRALGWIG + AA A V GTGPVSA Sbjct 241 PISQLFYNTVGLPYFAIGIGNSLITSWRALGWIGSRGRRSCRAA-RRPSARVCGTGPVSA 299 Query 301 GLGNAATIGKLSLPPNWAGASPSLAPTVGSASAPLVSDIVEQPEAGAAGNLLGGMPLAGS 360 GLGNAATIGKLS+PPNWAGASPSLAPTVGSASAPLVSDIVEQPEAGAAGNLLGGMPLAGS Sbjct 300 GLGNAATIGKLSVPPNWAGASPSLAPTVGSASAPLVSDIVEQPEAGAAGNLLGGMPLAGS 359 Query 361 GTGTGGAGPRYGFRVTVMSRPPFAG 385 GTGTGGAGPRYGFRVTVMSRPPFAG Sbjct 360 GTGTGGAGPRYGFRVTVMSRPPFAG 384 >gi|240170165|ref|ZP_04748824.1| PPE family protein [Mycobacterium kansasii ATCC 12478] Length=393 Score = 422 bits (1085), Expect = 4e-116, Method: Compositional matrix adjust. Identities = 279/395 (71%), Positives = 324/395 (83%), Gaps = 12/395 (3%) Query 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60 MDFGALPPEVNSGR+Y GPGSAP+VAAASAW+GLA+ELS AA GY+RV+TTL EEWLGP Sbjct 1 MDFGALPPEVNSGRLYAGPGSAPLVAAASAWSGLASELSSAADGYQRVVTTLHAEEWLGP 60 Query 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120 ASTLM+EAVAPY+AWMRA A QAEQAASQARAAAAA+ETAFA++VPPPLIAANRA+L SL Sbjct 61 ASTLMIEAVAPYLAWMRAAAAQAEQAASQARAAAAAFETAFASVVPPPLIAANRAQLASL 120 Query 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180 + NV+GQ A+IAA EAQYAEMWAQDA AMY YAGSSA+A ++TP+ PPP+ TSP+AAA Sbjct 121 IAKNVYGQYGAAIAALEAQYAEMWAQDARAMYSYAGSSASAAQLTPYTPPPHITSPAAAA 180 Query 181 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLTSPLSSALTA---AATPGWLEWFIN 237 TQ +AV +A TSAGAAQ+ ++ LI+ LP+ LLGL SP+SSAL A + PGWL+W I+ Sbjct 181 TQSAAVTQAVATSAGAAQNTLSGLISELPSMLLGLASPISSALNAGGLTSNPGWLQWLID 240 Query 238 WYLPISQLFYNTVGLPYFAIGIGNSLITSWRALGWIGPEAAEAAAAA-------PAAVGA 290 WY+PISQL YNTVGLPYFAIGIGNSLITSWRALGWIGP A+E + + A A Sbjct 241 WYMPISQLIYNTVGLPYFAIGIGNSLITSWRALGWIGPAASEISETSAAAAAAAAGAAPA 300 Query 291 AVGGTGPVSAGLGNAATIGKLSLPPNWAGASPSLAPTVGSASAPLVSDIVEQPEAGAAGN 350 A+GG GPV+AGLGNA+ +GKLS+PP W+ A+P P V A APL SDIV PE GA G+ Sbjct 301 ALGGAGPVTAGLGNASALGKLSVPPTWS-ANPGPGPAVADA-APLASDIVNPPEVGAPGS 358 Query 351 LLGGMPLAGSGTGTGGAGPRYGFRVTVMSRPPFAG 385 LLGGMPLAG G GAGP+YGFRVTVMSRPPFAG Sbjct 359 LLGGMPLAGPGAAAAGAGPKYGFRVTVMSRPPFAG 393 >gi|118617327|ref|YP_905659.1| PPE family protein [Mycobacterium ulcerans Agy99] gi|118569437|gb|ABL04188.1| PPE family protein [Mycobacterium ulcerans Agy99] Length=392 Score = 409 bits (1051), Expect = 4e-112, Method: Compositional matrix adjust. Identities = 258/393 (66%), Positives = 305/393 (78%), Gaps = 9/393 (2%) Query 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60 MDFGALPPEVNSGRMY GPGS PMV+AASAWN LA+ELS A GYERVI L EEW GP Sbjct 1 MDFGALPPEVNSGRMYTGPGSTPMVSAASAWNRLASELSFTADGYERVIKALSGEEWFGP 60 Query 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120 AS +M+EA+ PYV WMR+TA+QAE+AA QA AA AA+E AF +VPPPLIA+NR +L +L Sbjct 61 ASAMMLEAITPYVTWMRSTAVQAERAAKQAEAAVAAFEAAFTGVVPPPLIASNRMQLMTL 120 Query 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180 + N++GQ TA IA+ EAQYAEMWAQDA AMY YAGSSA+ATK+T F PPP T +P+A+A Sbjct 121 MARNIYGQYTAEIASLEAQYAEMWAQDARAMYTYAGSSASATKITAFTPPPETANPAASA 180 Query 181 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLTSPLSSALTAAATPG-WLEWFINWY 239 Q +A + AA T+AGAAQS +A +I+ LPN L LTSP++SALT+AA+P W++W +NWY Sbjct 181 LQSNATSTAAATAAGAAQSTLAGVISQLPNALTSLTSPIASALTSAASPATWIDWLVNWY 240 Query 240 LPISQLFYNTVGLPYFAIGIGNSLITSWRALGWI------GPEAAEAAAAAPAAVGAAVG 293 LPISQLFYNTVGLPYFAIGIG+SLITS RALG I A AA AA A AA+G Sbjct 241 LPISQLFYNTVGLPYFAIGIGSSLITSERALGLIGPEAEAAAAGAGAAEAAAGAAPAALG 300 Query 294 GTGPVSAGLGNAATIGKLSLPPNWAGASPSLAPTVGSASAPLVSDIVEQPEAGAAGNLLG 353 G GP+ AGLGNA+ +GKLS+PP+W G+ + P+V SA PL SDIV PEA A G+LLG Sbjct 301 GAGPIGAGLGNASALGKLSVPPSWPGSGLDVPPSV-SAGGPLASDIVNPPEASAPGSLLG 359 Query 354 GMPL-AGSGTGTGGAGPRYGFRVTVMSRPPFAG 385 GMPL G G GAGPRYGFRVTVM+RPPFAG Sbjct 360 GMPLAGGPGGAAAGAGPRYGFRVTVMARPPFAG 392 >gi|183982531|ref|YP_001850822.1| PPE family protein [Mycobacterium marinum M] gi|183175857|gb|ACC40967.1| PPE family protein [Mycobacterium marinum M] Length=392 Score = 397 bits (1019), Expect = 2e-108, Method: Compositional matrix adjust. Identities = 259/393 (66%), Positives = 305/393 (78%), Gaps = 9/393 (2%) Query 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60 MDFGALPPEVNSGRMY GPGS PMV+AASAWN LA+ELS A GYERVI L EEW GP Sbjct 1 MDFGALPPEVNSGRMYTGPGSTPMVSAASAWNRLASELSFTADGYERVIKALSGEEWFGP 60 Query 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120 AS +M+EA+ PYV WMR+TA+QAEQAA QA AA AA+E AF +VPPPLIA+NR +L +L Sbjct 61 ASAMMLEAITPYVTWMRSTAVQAEQAAKQAEAAVAAFEAAFTGVVPPPLIASNRMQLMTL 120 Query 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180 + N++GQ TA IA+ EAQ AEMWAQDA AMY YAGSSA+ATK+T F PPP T +P+A+A Sbjct 121 MARNIYGQYTAEIASLEAQDAEMWAQDARAMYTYAGSSASATKITAFTPPPETANPAASA 180 Query 181 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLTSPLSSALTAAATPG-WLEWFINWY 239 Q +A + AA T+AGAAQS +A +I+ LPN L LTSP++SALT+AA+P W++W +NWY Sbjct 181 LQSNATSTAAATAAGAAQSTLAGVISQLPNALTSLTSPIASALTSAASPATWIDWLVNWY 240 Query 240 LPISQLFYNTVGLPYFAIGIGNSLITSWRALGWI------GPEAAEAAAAAPAAVGAAVG 293 LPISQLFYNTVGLPYFAIGIG+SLITS RALG I A AA AA A AA+G Sbjct 241 LPISQLFYNTVGLPYFAIGIGSSLITSERALGLIGPEAEAAAAGAGAAEAAAGAAPAALG 300 Query 294 GTGPVSAGLGNAATIGKLSLPPNWAGASPSLAPTVGSASAPLVSDIVEQPEAGAAGNLLG 353 G GP+ AGLGNA+ +GKLS+PP+WAG+ + P+V SA PL SDIV PEA A G+LLG Sbjct 301 GAGPIGAGLGNASALGKLSVPPSWAGSGLDVPPSV-SAGGPLASDIVNPPEASAPGSLLG 359 Query 354 GMPL-AGSGTGTGGAGPRYGFRVTVMSRPPFAG 385 GMPL G G GAGPRYGFRVTVM+RPPFAG Sbjct 360 GMPLAGGPGGAAAGAGPRYGFRVTVMARPPFAG 392 >gi|289757814|ref|ZP_06517192.1| predicted protein [Mycobacterium tuberculosis T85] gi|289713378|gb|EFD77390.1| predicted protein [Mycobacterium tuberculosis T85] Length=298 Score = 353 bits (907), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 211/246 (86%), Positives = 220/246 (90%), Gaps = 3/246 (1%) Query 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP Sbjct 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60 Query 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL Sbjct 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120 Query 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSA Sbjct 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAGG 180 Query 181 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLTSPLSSALTAAATPGWLEWFINWYL 240 + + + A A A ++ +ELIAH P +P+ +TAAATPGWLEWFINWYL Sbjct 181 SSVRSRKAPAPQPARAERN--SELIAHCPTRCWASLAPVVR-VTAAATPGWLEWFINWYL 237 Query 241 PISQLF 246 PISQLF Sbjct 238 PISQLF 243 >gi|183981114|ref|YP_001849405.1| PPE family protein [Mycobacterium marinum M] gi|183174440|gb|ACC39550.1| PPE family protein [Mycobacterium marinum M] Length=380 Score = 339 bits (870), Expect = 4e-91, Method: Compositional matrix adjust. Identities = 212/385 (56%), Positives = 271/385 (71%), Gaps = 5/385 (1%) Query 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60 MDFG LPPE+NS RMY GPGS+P++ ASAW+GLAAELS A YE VI+ LQ++ W+GP Sbjct 1 MDFGILPPEINSARMYSGPGSSPLLTVASAWSGLAAELSATANDYETVISGLQSQGWVGP 60 Query 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120 +S M ++ PYVAW+RATA EQ+AS+AR AA+AYE AFAA VPPP IAANRA LT L Sbjct 61 SSEAMANSIWPYVAWLRATAAATEQSASKARIAASAYEAAFAATVPPPQIAANRAELTGL 120 Query 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180 ++ NV GQN+A+IAA EAQY EMW+QDA MY YA S ATAT +TPF PP TT+P+AAA Sbjct 121 ISTNVVGQNSAAIAAAEAQYGEMWSQDAATMYAYAASCATATSLTPFVSPPQTTNPTAAA 180 Query 181 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLTSPLSSALTAAATPGWLEWFINWYL 240 TQ +++AA T+ G AQS ++ LI+ +P L LTSPL+SA A++T G +E F+ WY Sbjct 181 TQAGTLSRAAATTTGTAQSTLSRLISEVPGVLQALTSPLASA--ASSTAGPIERFLEWYA 238 Query 241 PISQLFYNTVGLPYFAIGIGNSLITSWRALGWIGPEAAEAAAAAPAAVGAAVGGTGPVSA 300 P + FY+T+GLP+F GI + + + G IGP AA AA A A G GPVSA Sbjct 239 PFANFFYDTLGLPFFGAGITSFFAATAKTAGAIGPAAAAPAATVAATGAAEAVGAGPVSA 298 Query 301 GLGNAATIGKLSLPPNWAGASPSLAPTVGSASAPLVSDIVEQPEAGAAGNLLGGMPLAGS 360 L A+T+GKLS+P W GA+P+ +PT S +SD++E A GN++GG+P+ G Sbjct 299 SLAQASTVGKLSVPHTWEGATPATSPTTASK---FISDVIEPESVEAGGNVIGGVPMPGP 355 Query 361 GTGTGGAGPRYGFRVTVMSRPPFAG 385 G G+ GAGPRYG R+TVM PP AG Sbjct 356 GKGSAGAGPRYGVRLTVMPHPPSAG 380 >gi|118616629|ref|YP_904961.1| PPE family protein [Mycobacterium ulcerans Agy99] gi|118568739|gb|ABL03490.1| PPE family protein [Mycobacterium ulcerans Agy99] Length=380 Score = 337 bits (865), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 215/385 (56%), Positives = 271/385 (71%), Gaps = 5/385 (1%) Query 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60 MDF LPPE+NS RMY GPGS+P++ ASAW+GLAAELS A YE VI+ LQ++ W+GP Sbjct 1 MDFRILPPEINSARMYSGPGSSPLLTVASAWSGLAAELSATANDYETVISGLQSQGWVGP 60 Query 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120 +S M ++ PYVAW+RATA EQ+AS+AR AA+AYE AFAA VPPP IAANRA LT L Sbjct 61 SSEAMANSIWPYVAWLRATAAATEQSASKARIAASAYEAAFAATVPPPQIAANRAELTGL 120 Query 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180 ++ NV GQN+A+IAA EAQY EMW+QDA MY YA S ATAT VTPF PP TTSP+AAA Sbjct 121 ISTNVVGQNSAAIAAAEAQYGEMWSQDAATMYAYAASCATATSVTPFVSPPQTTSPTAAA 180 Query 181 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLTSPLSSALTAAATPGWLEWFINWYL 240 TQ +A+AA T+AG AQS ++ LI+ +P L LTSPL+SA A++T G +E F+ WY Sbjct 181 TQAGTLARAAATTAGTAQSTLSRLISEVPGVLQALTSPLASA--ASSTAGPIERFLEWYA 238 Query 241 PISQLFYNTVGLPYFAIGIGNSLITSWRALGWIGPEAAEAAAAAPAAVGAAVGGTGPVSA 300 P + FY+T+GLP+F GI + + + G IGP AA AA A A G GPVSA Sbjct 239 PFANFFYDTLGLPFFGAGITSLFAATAKTAGAIGPAAAAPAATVAATGAAEAVGAGPVSA 298 Query 301 GLGNAATIGKLSLPPNWAGASPSLAPTVGSASAPLVSDIVEQPEAGAAGNLLGGMPLAGS 360 L A+T+GKLS+P W GA+P+ +PT S +SD++E A GN++GG+P+ G Sbjct 299 SLAQASTVGKLSVPHTWEGATPATSPTTASK---FISDVIEPESVEAGGNVIGGVPMPGP 355 Query 361 GTGTGGAGPRYGFRVTVMSRPPFAG 385 G G+ GAGPRYG R+TVM PP AG Sbjct 356 GEGSAGAGPRYGVRLTVMPHPPSAG 380 >gi|240171969|ref|ZP_04750628.1| PPE family protein [Mycobacterium kansasii ATCC 12478] Length=396 Score = 336 bits (861), Expect = 5e-90, Method: Compositional matrix adjust. Identities = 227/395 (58%), Positives = 281/395 (72%), Gaps = 10/395 (2%) Query 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60 +DFG LPPEV S RMY GPGSAPM+AAASAW+GLAAEL+ A YE ++ LQ+E+W+GP Sbjct 2 IDFGVLPPEVTSIRMYSGPGSAPMLAAASAWSGLAAELTATADDYETIVARLQSEDWIGP 61 Query 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120 A+T M AV PYVAWMRATA QAEQ A+QAR AAYE A AA+VPPPL+A NRA++ L Sbjct 62 AATSMAGAVQPYVAWMRATAAQAEQTATQARMLVAAYEAAVAAVVPPPLVAGNRAQVALL 121 Query 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180 V+ NVFGQNT+ +A EA+Y +MW QDA AMY YA +SA A+++TPF P TTSPSA+A Sbjct 122 VSTNVFGQNTSRVALLEAEYGDMWTQDATAMYVYAAASANASRLTPFTSPTQTTSPSASA 181 Query 181 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLTSPLSSALT---AAATPG----WLE 233 Q +AVAKAAGT+AG Q+ +++L++ PN LL L +PLSS L AA TP WLE Sbjct 182 WQGAAVAKAAGTAAGGIQNLLSKLVSQAPNALLDLATPLSSLLASAGAAPTPPTWVVWLE 241 Query 234 WFINWYLPISQLFYNTVGLPYFAIGIGNSLITSWRALGWIGPEAAEAAAAAPAAVGAA-- 291 F+N P++ +YN GLPYF IGI NSL ++ RA+G IGPE AAA+A A A Sbjct 242 DFLNLIAPLTGTWYNVTGLPYFGIGITNSLASTARAVGAIGPEVGAAAASAGGAAADAAG 301 Query 292 -VGGTGPVSAGLGNAATIGKLSLPPNWAGASPSLAPTVGSASAPLVSDIVEQPEAGAAGN 350 +G P++AG+GNA +GKLS+PP W+ P P+VGS SAPLVS+I A + N Sbjct 302 TLGRGAPIAAGMGNAPAVGKLSVPPGWSATGPVPVPSVGSVSAPLVSNIALPEAASESSN 361 Query 351 LLGGMPLAGSGTGTGGAGPRYGFRVTVMSRPPFAG 385 +LGGMPLAG G G+ PRYGFR VM RPPFAG Sbjct 362 MLGGMPLAGPGVNAAGSAPRYGFRPKVMVRPPFAG 396 >gi|240167786|ref|ZP_04746445.1| PPE family protein [Mycobacterium kansasii ATCC 12478] Length=380 Score = 316 bits (809), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 235/385 (62%), Positives = 291/385 (76%), Gaps = 5/385 (1%) Query 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60 MDFGALPPE+NS R+Y GPGSAPMVAAASAW+GLAAEL+ AA Y+ VIT L +E W+GP Sbjct 1 MDFGALPPEINSIRLYSGPGSAPMVAAASAWSGLAAELTSAANEYQTVITALHSEGWVGP 60 Query 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120 ++ M AVAPYVAWMRATA AEQAA +AR AAAAYETAFAA+VPPP IAANRA+L++L Sbjct 61 SAVTMAAAVAPYVAWMRATAAAAEQAAGKARLAAAAYETAFAAVVPPPQIAANRAQLSTL 120 Query 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180 ++ NV GQNTA+IAATE QY +MWAQDA AMY YA +SATA+ VTPF PP TTSP+A+A Sbjct 121 ISANVVGQNTAAIAATETQYGQMWAQDAAAMYAYAAASATASAVTPFISPPQTTSPAASA 180 Query 181 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLTSPLSSALTAAATPGWLEWFINWYL 240 TQ +AV AA T+AGA QS ++ L++ LP L GL SPL+SA++A A P +E F+ W+ Sbjct 181 TQAAAVTSAAATAAGATQSTLSSLLSELPGVLEGLASPLASAVSATAGP--IERFLEWWA 238 Query 241 PISQLFYNTVGLPYFAIGIGNSLITSWRALGWIGPEAAEAAAAAPAAVGAAVGGTGPVSA 300 P + Y+T GLP+F GI + ++ + +G IGP AA AAA AA A + G GPVSA Sbjct 239 PFANFLYDTAGLPFFGAGIASFFASTAKTMGLIGPAAAAPEAAAAAAGAAGLVGGGPVSA 298 Query 301 GLGNAATIGKLSLPPNWAGASPSLAPTVGSASAPLVSDIVEQPEAGAAGNLLGGMPLAGS 360 L A+TIGKLS+PP WAGASP PT S VSD++E + G++GN++GGMP+AGS Sbjct 299 SLAQASTIGKLSVPPTWAGASPVATPTSTSM---FVSDVIEPADLGSSGNVVGGMPMAGS 355 Query 361 GTGTGGAGPRYGFRVTVMSRPPFAG 385 G+ GAGPRYGFR TV++RPP AG Sbjct 356 SRGSAGAGPRYGFRPTVVTRPPSAG 380 >gi|296167733|ref|ZP_06849950.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897076|gb|EFG76691.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=406 Score = 313 bits (802), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 205/409 (51%), Positives = 252/409 (62%), Gaps = 28/409 (6%) Query 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60 +DFGA PPE NS RMY GPG + AAASAWNGLAAEL+ A+GY++VIT L EEWLGP Sbjct 2 IDFGAAPPEYNSARMYTGPGPEALTAAASAWNGLAAELNSTALGYDKVITALSGEEWLGP 61 Query 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120 AS M +AVAPYVAWMR TA QAEQ A+Q AAA AYETA AA VPPPL+AANRA+ L Sbjct 62 ASASMAQAVAPYVAWMRTTAAQAEQTANQMHAAATAYETALAATVPPPLVAANRAQTAQL 121 Query 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180 + NV G NT +IA EAQY EMWAQDA MY YAG SA ATKV PF P +PSA A Sbjct 122 LATNVLGLNTPAIAQLEAQYGEMWAQDASTMYSYAGQSAAATKVAPFTAAPQIANPSAQA 181 Query 181 TQLSAVAKAAGTSAGAA-QSAIAELIAHLPNTLLGLTSPLSSALTAAATPGWLEW----- 234 TQ +AVA A G SA ++ QS ++ ++ PNTL L +P ++ + + P W Sbjct 182 TQGTAVANATGNSAASSTQSVLSHAVSSTPNTLQALAAPAATQSSTTSAPFSEIWYLLTG 241 Query 235 ----------FINWYLPISQLFYNTVGLPYFAIGIGNSLITSWRALGWIGPEAAEAAAAA 284 F+N Y P S L+YNT GLPYF++G+GN + + G + AA A A Sbjct 242 QTTLPTSLGSFVNGYNPFSALWYNTEGLPYFSVGMGNFGVQIAKTTGLLN-GAAPAVKAL 300 Query 285 P-----AAVGAAVGGTGPVSAGLGNAATI-GKLSLPPNWAGASPSLAPTVGSASAPLVSD 338 P + +A LGNAA++ G+LS+P +W+ AS + AP +G A VS Sbjct 301 PGLGGLGGLLGGGATAAHPAAALGNAASVGGRLSVPVSWSAAS-TPAPVLGQAIP--VST 357 Query 339 IVEQPEAGAA-GNLL-GGMPLAGSGTGTGGAGPRYGFRVTVMSRPPFAG 385 + P+A AA GNLL G G G GP+YGFR TVM+RPPF G Sbjct 358 VSAAPDATAAPGNLLGGMPLAGAGAGGHAGVGPKYGFRPTVMARPPFGG 406 >gi|183981917|ref|YP_001850208.1| PPE family protein [Mycobacterium marinum M] gi|183175243|gb|ACC40353.1| PPE family protein [Mycobacterium marinum M] Length=398 Score = 293 bits (750), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 206/402 (52%), Positives = 260/402 (65%), Gaps = 21/402 (5%) Query 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60 MDFG PPEV S MY GPGS M AAAS WN +AAEL AA YE ++ L E WLGP Sbjct 1 MDFGRRPPEVTSALMYMGPGSTSMTAAASVWNRVAAELDSAATSYESLVIGLVEEGWLGP 60 Query 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120 AS M +AVAPYV WMRATA QAE A QARA+AAAYETAF A+VPPPLI+ANR RL L Sbjct 61 ASVAMADAVAPYVVWMRATAAQAEHTAMQARASAAAYETAFGAVVPPPLISANRVRLAEL 120 Query 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180 + NVFGQNTA I A E +Y +MWAQDA AMY YA ++++AT++TPF P SP A + Sbjct 121 IASNVFGQNTAVITALETEYGQMWAQDAAAMYEYAAATSSATELTPFTQPQQIVSPGAGS 180 Query 181 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLTSPLSSALTAAATPGWLEWFINW-- 238 Q++AVA +A T AG +Q+ ++ LI+ +P L G+ +PL+++ T + GWL W I + Sbjct 181 GQIAAVAHSAATLAGTSQTTLSRLISEIPKALHGIVAPLAASTTPDSPLGWL-WQILFGT 239 Query 239 ------------YLPISQLFYNTVGLPYFAIGIGNSLITSWRALGWIG---PEAAEAAAA 283 P + FYNT GLPYF+IG+ N+ I + LG + A AA+ Sbjct 240 TFPTSISALLTDLQPYASFFYNTEGLPYFSIGMANNFIQMSKTLGLLSGTTAAATGGAAS 299 Query 284 APAAVGAAVGGTGPVSAGLGNAATIGKLSLPPNWAGASPSLAPTVGSASAPLVSDIVEQP 343 A +G + G G VSA LG+AA++G+LS+PP+WA + P L A P + + P Sbjct 300 GLAGLGGLIDGGGQVSAHLGHAASLGRLSVPPSWAQSVPDLESM--PARMP-IETLKFAP 356 Query 344 EAGAAGNLLGGMPLAGSGTGTGGAGPRYGFRVTVMSRPPFAG 385 + G AGNLLGGMPL G G G G+GPRYG R TVM+RPPFAG Sbjct 357 DGGGAGNLLGGMPLGGPGLGASGSGPRYGVRPTVMARPPFAG 398 >gi|289761860|ref|ZP_06521238.1| PPE family protein [Mycobacterium tuberculosis GM 1503] gi|289709366|gb|EFD73382.1| PPE family protein [Mycobacterium tuberculosis GM 1503] Length=198 Score = 291 bits (744), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 181/195 (93%), Positives = 183/195 (94%), Gaps = 2/195 (1%) Query 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP Sbjct 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60 Query 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL Sbjct 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120 Query 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFA NTT+ Sbjct 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFA-RANTTAIR-RG 178 Query 181 TQLSAVAKAAGTSAG 195 + AVAK AGTSAG Sbjct 179 DAVVAVAKGAGTSAG 193 >gi|254364621|ref|ZP_04980667.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem] gi|134150135|gb|EBA42180.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem] Length=391 Score = 285 bits (729), Expect = 9e-75, Method: Compositional matrix adjust. Identities = 239/403 (60%), Positives = 273/403 (68%), Gaps = 30/403 (7%) Query 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60 MDFGALPPEVNS RMY GPGSAPMVAAASAWNGLAAELS AA GYE VIT L +E WLGP Sbjct 1 MDFGALPPEVNSVRMYAGPGSAPMVAAASAWNGLAAELSSAATGYETVITQLSSEGWLGP 60 Query 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120 AS M EAVAPYVAWM A A QAEQAA+QARAAAAA+E AFAA VPPPLIAANRA L L Sbjct 61 ASAAMAEAVAPYVAWMSAAAAQAEQAATQARAAAAAFEAAFAATVPPPLIAANRASLMQL 120 Query 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180 ++ NVFGQNT++IAA EAQY EMWAQD+ AMY YAGSSA+A+ VTPF+ PP +P+A Sbjct 121 ISTNVFGQNTSAIAAAEAQYGEMWAQDSAAMYAYAGSSASASAVTPFSTPPQIANPTAQG 180 Query 181 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLTSPLSSALTAAATPGWLEWF----- 235 TQ AVA AAGT AQS + E+I LPN L LTSPL + + W F Sbjct 181 TQ--AVATAAGT----AQSTLTEMITGLPNALQSLTSPLLQSSNGPLSWLWQILFGTPNF 234 Query 236 -------INWYLPISQLFYNTVGLPYFAIGIGNSLITSWRALGWIGPEAAEAAAAAPAAV 288 + P + FYNT GLPYF+IG+GN+ I S + LG IG A A AAA A Sbjct 235 PTSISALLTDLQPYASFFYNTEGLPYFSIGMGNNFIQSAKTLGLIGSAAPAAVAAAGDAA 294 Query 289 G-----AAVGGTGPVSAGLGNAATIGKLSLPPNWAGASPSLAPTVGSASAPL-VSDIVEQ 342 + G GPV+AGLGNAA++GKLS+PP W+G P +V +APL VS + Sbjct 295 KGLPGLGGMLGGGPVAAGLGNAASVGKLSVPPVWSGPLPG---SVTPGAAPLPVSTVSAA 351 Query 343 PEAGAAGNLLGGMPLAGSGTGTGGAGPRYGFRVTVMSRPPFAG 385 PEA L G L +G G GAGPRYGFR TVM+RPPFAG Sbjct 352 PEAAPGSLLGG---LPLAGAGGAGAGPRYGFRPTVMARPPFAG 391 >gi|212596789|gb|ACJ35606.1| PPE45 [Mycobacterium intracellulare ATCC 13950] Length=391 Score = 276 bits (707), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 215/397 (55%), Positives = 265/397 (67%), Gaps = 19/397 (4%) Query 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60 +DFGALPPE++S RMY GPGSA M+AAA AWN LAAEL AA Y+R+IT L +EEW+GP Sbjct 2 LDFGALPPEIHSERMYSGPGSASMMAAAWAWNLLAAELDSAANDYDRIITQLVSEEWMGP 61 Query 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120 AS M EA PYVAWMR TA+QAEQAA ARAAA AYE AFAA VPPPLI ANRA+L Sbjct 62 ASAQMAEAAKPYVAWMRTTAMQAEQAAVSARAAAGAYEAAFAATVPPPLIEANRAQLVQA 121 Query 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180 V+ NV GQNT I E QYAEMWAQDA AMYGYAG +A T+VTPF P TT+P+ A Sbjct 122 VSTNVLGQNTPLIVQLETQYAEMWAQDATAMYGYAGQAAPVTQVTPFTRPAETTNPAGEA 181 Query 181 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLTSPLSSALTAAATPGWLEW---FIN 237 Q ++VA+AAGTSAG A+SA ++L++ +P TL L+SP ++ LE F Sbjct 182 MQAASVAQAAGTSAG-AESAQSQLLSSVPPTLQALSSPAAANTELPPITDVLEQNPVFDM 240 Query 238 W--YLPISQLFYNTVGLPYFAIGIGNSLITSWRALGWIGPEAAEAAAAAPA--AVGAAV- 292 W Y +Q NT+ + Y G+ ++ + L A+E A AA + AVGA++ Sbjct 241 WAEYASPAQ---NTLAMMYRVTGMSTHFLSLSKGLAPAAKAASEGAKAAASLPAVGASLR 297 Query 293 ---GGTGPVSAGLGNAATIGKLSLPPNWAGAS-PSLAPTVGSASAPLVSDIVEQPEAGAA 348 GG G +SA L +AA +G LS+PP W A+ P++A G++S P VS + PE Sbjct 298 GLTGGGGAISATLASAAPVGGLSVPPAWTSAAGPAVA--SGASSIP-VSRFITTPETSGP 354 Query 349 GNLLGGMPLAGSGTGTGGAGPRYGFRVTVMSRPPFAG 385 GNLLGGMPLAG G G+ GAGPRYG R TVM+RPPFAG Sbjct 355 GNLLGGMPLAGVGGGSTGAGPRYGIRPTVMARPPFAG 391 >gi|340626801|ref|YP_004745253.1| PPE family protein [Mycobacterium canettii CIPT 140010059] gi|340004991|emb|CCC44139.1| PPE family protein [Mycobacterium canettii CIPT 140010059] Length=397 Score = 273 bits (698), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 240/403 (60%), Positives = 276/403 (69%), Gaps = 24/403 (5%) Query 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60 MDFGALPPEVNS RMY GPGSAPMVAAASAWNGLAAELS AA GYE VIT L +E WLGP Sbjct 1 MDFGALPPEVNSVRMYAGPGSAPMVAAASAWNGLAAELSSAATGYETVITQLSSEGWLGP 60 Query 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120 AS M EAVAPYVAWM A A QAEQAA+QARAAAAA+E AFAA VPPPLIAANRA L L Sbjct 61 ASAAMAEAVAPYVAWMSAAAAQAEQAATQARAAAAAFEAAFAATVPPPLIAANRASLMQL 120 Query 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180 ++ NVFGQNT++IAA EAQY EMWAQD+ AMY YAGSSA+A+ VTPF+ PP +P+A Sbjct 121 ISTNVFGQNTSAIAAAEAQYGEMWAQDSAAMYAYAGSSASASAVTPFSTPPQIANPTAQG 180 Query 181 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLTSPLSSALTAAATPGWLEWF----- 235 TQ +AVA AAGT+AG AQS + E+I LPN L LTSPL + + W F Sbjct 181 TQAAAVATAAGTAAGTAQSTLTEMITGLPNALQSLTSPLLQSSNGPLSWLWQILFGTPNF 240 Query 236 -------INWYLPISQLFYNTVGLPYFAIGIGNSLITSWRALGWIGPEAAEAAAAAPAAV 288 + P + FYNT GLPYF+IG+GN+ I S + LG IG A A AAA A Sbjct 241 PTSISALLTDLQPYASFFYNTEGLPYFSIGMGNNFIQSAKTLGLIGSAAPAAVAAAGDAA 300 Query 289 G-----AAVGGTGPVSAGLGNAATIGKLSLPPNWAGASPSLAPTVGSASAPL-VSDIVEQ 342 + G GPV+AGLGNAA++GKLS+PP W+G P +V +APL VS + Sbjct 301 KGLPGLGGMLGGGPVAAGLGNAASVGKLSVPPVWSGPLPG---SVTPGAAPLPVSTVSAA 357 Query 343 PEAGAAGNLLGGMPLAGSGTGTGGAGPRYGFRVTVMSRPPFAG 385 PEA L G +G G GAGPRYGFR TVM+RPPFAG Sbjct 358 PEAAPGSLLGGL---PLAGAGGAGAGPRYGFRPTVMARPPFAG 397 >gi|289569854|ref|ZP_06450081.1| PPE family protein [Mycobacterium tuberculosis T17] gi|289543608|gb|EFD47256.1| PPE family protein [Mycobacterium tuberculosis T17] Length=393 Score = 269 bits (687), Expect = 7e-70, Method: Compositional matrix adjust. Identities = 234/403 (59%), Positives = 269/403 (67%), Gaps = 28/403 (6%) Query 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60 MDFGALPPEVNS RMY GPGSAPMVAAASAWNGLAAELS AA GYE VIT L +E WLGP Sbjct 1 MDFGALPPEVNSVRMYAGPGSAPMVAAASAWNGLAAELSSAATGYETVITQLSSEGWLGP 60 Query 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120 AS M EAVAPYVAWM A A QAEQAA+QARAAAAA+E AFAA VPPPLIAANRA L L Sbjct 61 ASAAMAEAVAPYVAWMSAAAAQAEQAATQARAAAAAFEAAFAATVPPPLIAANRASLMQL 120 Query 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180 ++ NVFGQNT++IAA EAQY EMWAQD+ AMY YAGSSA+A+ VTPF+ PP +P+A Sbjct 121 ISTNVFGQNTSAIAAAEAQYGEMWAQDSAAMYAYAGSSASASAVTPFSTPPQIANPTAQG 180 Query 181 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLTSPLSSALTAAATPGWLEWF----- 235 A A T+AG AQS + E+I LPN L LTSPL + + W F Sbjct 181 ----TQAAAVATAAGTAQSTLTEMITGLPNALQSLTSPLLQSSNGPLSWLWQILFGTPNF 236 Query 236 -------INWYLPISQLFYNTVGLPYFAIGIGNSLITSWRALGWIGPEAAEAAAAAPAAV 288 + P + FYNT GLPYF+IG+GN+ I S + LG IG A A AAA A Sbjct 237 PTSISALLTDLQPYASFFYNTEGLPYFSIGMGNNFIQSTKTLGLIGSAAPAAVAAAGDAA 296 Query 289 G-----AAVGGTGPVSAGLGNAATIGKLSLPPNWAGASPSLAPTVGSASAPL-VSDIVEQ 342 + G GPV+AGLGNAA++GKLS+PP W+G P +V +APL VS + Sbjct 297 KGLPGLGGMLGGGPVAAGLGNAASVGKLSVPPVWSGPLPG---SVTPGAAPLPVSTVSAA 353 Query 343 PEAGAAGNLLGGMPLAGSGTGTGGAGPRYGFRVTVMSRPPFAG 385 PEA L G +G G GAGPRYGFR TVM+RPPFAG Sbjct 354 PEAAPGSLLGGL---PLAGAGGAGAGPRYGFRPTVMARPPFAG 393 >gi|289745779|ref|ZP_06505157.1| PPE family protein [Mycobacterium tuberculosis 02_1987] gi|339631843|ref|YP_004723485.1| PPE family protein [Mycobacterium africanum GM041182] gi|289686307|gb|EFD53795.1| PPE family protein [Mycobacterium tuberculosis 02_1987] gi|339331199|emb|CCC26881.1| PPE family protein [Mycobacterium africanum GM041182] Length=393 Score = 269 bits (687), Expect = 7e-70, Method: Compositional matrix adjust. Identities = 234/403 (59%), Positives = 269/403 (67%), Gaps = 28/403 (6%) Query 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60 MDFGALPPEVNS RMY GPGSAPMVAAASAWNGLAAELS AA GYE VIT L +E WLGP Sbjct 1 MDFGALPPEVNSVRMYAGPGSAPMVAAASAWNGLAAELSSAATGYETVITQLSSEGWLGP 60 Query 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120 AS M EAVAPYVAWM A A QAEQAA+QARAAAAA+E AFAA VPPPLIAANRA L L Sbjct 61 ASAAMAEAVAPYVAWMSAAATQAEQAATQARAAAAAFEAAFAATVPPPLIAANRASLMQL 120 Query 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180 ++ NVFGQNT++IAA EAQY EMWAQD+ AMY YAGSSA+A+ VTPF+ PP +P+A Sbjct 121 ISTNVFGQNTSAIAAAEAQYGEMWAQDSAAMYAYAGSSASASAVTPFSTPPQIANPTAQG 180 Query 181 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLTSPLSSALTAAATPGWLEWF----- 235 A A T+AG AQS + E+I LPN L LTSPL + + W F Sbjct 181 ----TQAAAVATAAGTAQSTLTEMITGLPNALQSLTSPLLQSSNGPLSWLWQILFGTPNF 236 Query 236 -------INWYLPISQLFYNTVGLPYFAIGIGNSLITSWRALGWIGPEAAEAAAAAPAAV 288 + P + FYNT GLPYF+IG+GN+ I S + LG IG A A AAA A Sbjct 237 PTSISALLTDLQPYASFFYNTEGLPYFSIGMGNNFIQSAKTLGLIGSAAPAAVAAAGDAA 296 Query 289 G-----AAVGGTGPVSAGLGNAATIGKLSLPPNWAGASPSLAPTVGSASAPL-VSDIVEQ 342 + G GPV+AGLGNAA++GKLS+PP W+G P +V +APL VS + Sbjct 297 KGLPGLGGMLGGGPVAAGLGNAASVGKLSVPPVWSGPLPG---SVTPGAAPLPVSTVSAA 353 Query 343 PEAGAAGNLLGGMPLAGSGTGTGGAGPRYGFRVTVMSRPPFAG 385 PEA L G +G G GAGPRYGFR TVM+RPPFAG Sbjct 354 PEAAPGSLLGGL---PLAGAGGAGAGPRYGFRPTVMARPPFAG 393 >gi|57116911|ref|YP_177835.1| PPE family protein [Mycobacterium tuberculosis H37Rv] gi|121637690|ref|YP_977913.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148661596|ref|YP_001283119.1| PPE family protein [Mycobacterium tuberculosis H37Ra] 51 more sequence titles Length=393 Score = 269 bits (687), Expect = 7e-70, Method: Compositional matrix adjust. Identities = 234/403 (59%), Positives = 269/403 (67%), Gaps = 28/403 (6%) Query 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60 MDFGALPPEVNS RMY GPGSAPMVAAASAWNGLAAELS AA GYE VIT L +E WLGP Sbjct 1 MDFGALPPEVNSVRMYAGPGSAPMVAAASAWNGLAAELSSAATGYETVITQLSSEGWLGP 60 Query 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120 AS M EAVAPYVAWM A A QAEQAA+QARAAAAA+E AFAA VPPPLIAANRA L L Sbjct 61 ASAAMAEAVAPYVAWMSAAAAQAEQAATQARAAAAAFEAAFAATVPPPLIAANRASLMQL 120 Query 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180 ++ NVFGQNT++IAA EAQY EMWAQD+ AMY YAGSSA+A+ VTPF+ PP +P+A Sbjct 121 ISTNVFGQNTSAIAAAEAQYGEMWAQDSAAMYAYAGSSASASAVTPFSTPPQIANPTAQG 180 Query 181 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLTSPLSSALTAAATPGWLEWF----- 235 A A T+AG AQS + E+I LPN L LTSPL + + W F Sbjct 181 ----TQAAAVATAAGTAQSTLTEMITGLPNALQSLTSPLLQSSNGPLSWLWQILFGTPNF 236 Query 236 -------INWYLPISQLFYNTVGLPYFAIGIGNSLITSWRALGWIGPEAAEAAAAAPAAV 288 + P + FYNT GLPYF+IG+GN+ I S + LG IG A A AAA A Sbjct 237 PTSISALLTDLQPYASFFYNTEGLPYFSIGMGNNFIQSAKTLGLIGSAAPAAVAAAGDAA 296 Query 289 G-----AAVGGTGPVSAGLGNAATIGKLSLPPNWAGASPSLAPTVGSASAPL-VSDIVEQ 342 + G GPV+AGLGNAA++GKLS+PP W+G P +V +APL VS + Sbjct 297 KGLPGLGGMLGGGPVAAGLGNAASVGKLSVPPVWSGPLPG---SVTPGAAPLPVSTVSAA 353 Query 343 PEAGAAGNLLGGMPLAGSGTGTGGAGPRYGFRVTVMSRPPFAG 385 PEA L G +G G GAGPRYGFR TVM+RPPFAG Sbjct 354 PEAAPGSLLGGL---PLAGAGGAGAGPRYGFRPTVMARPPFAG 393 >gi|15841257|ref|NP_336294.1| PPE family protein [Mycobacterium tuberculosis CDC1551] gi|13881484|gb|AAK46108.1| PPE family protein [Mycobacterium tuberculosis CDC1551] Length=411 Score = 269 bits (687), Expect = 8e-70, Method: Compositional matrix adjust. Identities = 234/403 (59%), Positives = 269/403 (67%), Gaps = 28/403 (6%) Query 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60 MDFGALPPEVNS RMY GPGSAPMVAAASAWNGLAAELS AA GYE VIT L +E WLGP Sbjct 19 MDFGALPPEVNSVRMYAGPGSAPMVAAASAWNGLAAELSSAATGYETVITQLSSEGWLGP 78 Query 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120 AS M EAVAPYVAWM A A QAEQAA+QARAAAAA+E AFAA VPPPLIAANRA L L Sbjct 79 ASAAMAEAVAPYVAWMSAAAAQAEQAATQARAAAAAFEAAFAATVPPPLIAANRASLMQL 138 Query 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180 ++ NVFGQNT++IAA EAQY EMWAQD+ AMY YAGSSA+A+ VTPF+ PP +P+A Sbjct 139 ISTNVFGQNTSAIAAAEAQYGEMWAQDSAAMYAYAGSSASASAVTPFSTPPQIANPTAQG 198 Query 181 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLTSPLSSALTAAATPGWLEWF----- 235 A A T+AG AQS + E+I LPN L LTSPL + + W F Sbjct 199 ----TQAAAVATAAGTAQSTLTEMITGLPNALQSLTSPLLQSSNGPLSWLWQILFGTPNF 254 Query 236 -------INWYLPISQLFYNTVGLPYFAIGIGNSLITSWRALGWIGPEAAEAAAAAPAAV 288 + P + FYNT GLPYF+IG+GN+ I S + LG IG A A AAA A Sbjct 255 PTSISALLTDLQPYASFFYNTEGLPYFSIGMGNNFIQSAKTLGLIGSAAPAAVAAAGDAA 314 Query 289 G-----AAVGGTGPVSAGLGNAATIGKLSLPPNWAGASPSLAPTVGSASAPL-VSDIVEQ 342 + G GPV+AGLGNAA++GKLS+PP W+G P +V +APL VS + Sbjct 315 KGLPGLGGMLGGGPVAAGLGNAASVGKLSVPPVWSGPLPG---SVTPGAAPLPVSTVSAA 371 Query 343 PEAGAAGNLLGGMPLAGSGTGTGGAGPRYGFRVTVMSRPPFAG 385 PEA L G +G G GAGPRYGFR TVM+RPPFAG Sbjct 372 PEAAPGSLLGGL---PLAGAGGAGAGPRYGFRPTVMARPPFAG 411 >gi|31792977|ref|NP_855470.1| PPE family protein [Mycobacterium bovis AF2122/97] gi|31618568|emb|CAD94520.1| PPE FAMILY PROTEIN [Mycobacterium bovis AF2122/97] Length=393 Score = 267 bits (682), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 233/403 (58%), Positives = 269/403 (67%), Gaps = 28/403 (6%) Query 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60 MDFGALPPEVNS RMY GPGSAPMVAAASAWNGLAAELS AA GYE VIT L +E WLGP Sbjct 1 MDFGALPPEVNSVRMYAGPGSAPMVAAASAWNGLAAELSSAATGYETVITQLSSEGWLGP 60 Query 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120 AS M EAVAPYVAWM A A QAEQAA+QARAAAAA+E AFAA VPPPLIAANRA L L Sbjct 61 ASAAMAEAVAPYVAWMSAAAAQAEQAATQARAAAAAFEAAFAATVPPPLIAANRASLMQL 120 Query 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180 ++ NVFGQNT++IAA EAQY EMWAQD+ AMY YAGSSA+A+ VTPF+ PP +P+A Sbjct 121 ISTNVFGQNTSAIAAAEAQYGEMWAQDSAAMYAYAGSSASASAVTPFSTPPQIANPTAQG 180 Query 181 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLTSPLSSALTAAATPGWLEWF----- 235 A A T+AG AQS + E+I LPN L LTSPL + + W F Sbjct 181 ----TQAAAVATAAGTAQSTLTEMITGLPNALQSLTSPLLQSSNGPLSWLWQILFGTPNF 236 Query 236 -------INWYLPISQLFYNTVGLPYFAIGIGNSLITSWRALGWIGPEAAEAAAAAPAAV 288 + P + FYNT GLPYF+IG+GN+ I + + LG IG A A AAA A Sbjct 237 PTSISALLTDLQPYASFFYNTEGLPYFSIGMGNNFIQAAKTLGLIGSAAPAAVAAAGDAA 296 Query 289 G-----AAVGGTGPVSAGLGNAATIGKLSLPPNWAGASPSLAPTVGSASAPL-VSDIVEQ 342 + G GPV+AGLGNAA++GKLS+PP W+G P +V +APL VS + Sbjct 297 KGLPGLGGMLGGGPVAAGLGNAASVGKLSVPPVWSGPLPG---SVTPGAAPLPVSTVSAA 353 Query 343 PEAGAAGNLLGGMPLAGSGTGTGGAGPRYGFRVTVMSRPPFAG 385 PEA L G +G G GAGPRYGFR TVM+RPPFAG Sbjct 354 PEAAPGSLLGGL---PLAGAGGAGAGPRYGFRPTVMARPPFAG 393 >gi|240172861|ref|ZP_04751520.1| PPE family protein, PPE31 [Mycobacterium kansasii ATCC 12478] Length=401 Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 195/405 (49%), Positives = 247/405 (61%), Gaps = 28/405 (6%) Query 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60 +DF LPPE+NS RMY GPGS PM+AAASAW LAAEL A+ Y V+ L EEW GP Sbjct 5 LDFAMLPPEINSARMYSGPGSGPMLAAASAWKSLAAELRATALSYHSVLAALTGEEWYGP 64 Query 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120 AS M A APYVAW+ TA+QAEQ A QA AAA AYE AF A VPPP+IAANRA+L +L Sbjct 65 ASASMAAAAAPYVAWLNTTAVQAEQTAVQAEAAAGAYEAAFGATVPPPVIAANRAQLMAL 124 Query 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180 + N+ GQNT +IAATEAQY EMWAQDAMAMYGYAGSSA AT+++PF P T+PS A Sbjct 125 IATNILGQNTPAIAATEAQYTEMWAQDAMAMYGYAGSSAAATQLSPFVEPQQATNPSGLA 184 Query 181 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLTSPLSSA-------LTAAATPGWLE 233 Q +AV +A+ SAG S ++ LI+ +P+ L GL+ P S++ L + P W + Sbjct 185 AQAAAVTEASANSAGNQSSTLSGLISMVPSALQGLSGPNSTSWLQVIWDLLTGSGPAWWQ 244 Query 234 WFINWYLPISQLFYNTV---GL--------PYFA-IGIGNSLITSWRALGWIGPEAAEAA 281 N + P + + +NT+ GL P+ A + G + + Sbjct 245 TLWNVWGPNANV-WNTITSTGLFVPGSTFAPFMASVLAGAVAADAAQDASAAAAGVGSGL 303 Query 282 AAAPAAVGAAVGGTGPVSAGLGNAATIGKLSLPPNWAGASPSLAPTVGSASAPLVSDIVE 341 AA P A +VG VSAGLGNA +GKLS+PP W A+P +P +GSA + +V Sbjct 304 AAGPLASTGSVGSA--VSAGLGNAGIVGKLSVPPAWTAAAPLHSP-LGSALG--GTPMVA 358 Query 342 QPEAGAAGNLLGGMPLAG-SGTGTGGAGPRYGFRVTVMSRPPFAG 385 P A AAG + GMP +G G A P+YGFR T ++RPP AG Sbjct 359 PPPAVAAG--MPGMPFGNMAGQPFGRAVPQYGFRPTFVARPPAAG 401 >gi|254821314|ref|ZP_05226315.1| PPE family protein [Mycobacterium intracellulare ATCC 13950] Length=376 Score = 252 bits (644), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 205/383 (54%), Positives = 252/383 (66%), Gaps = 19/383 (4%) Query 15 MYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGPASTLMVEAVAPYVA 74 MY GPGSA M+AAA AWN LAAEL AA Y+R+IT L +EEW+GPAS M EA PYVA Sbjct 1 MYSGPGSASMMAAAWAWNLLAAELDSAANDYDRIITQLVSEEWMGPASAQMAEAAKPYVA 60 Query 75 WMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSLVTHNVFGQNTASIA 134 WMR TA+QAEQAA ARAAA AYE AFAA VPPPLI ANRA+L V+ NV GQNT I Sbjct 61 WMRTTAMQAEQAAVSARAAAGAYEAAFAATVPPPLIEANRAQLVQAVSTNVLGQNTPLIV 120 Query 135 ATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAATQLSAVAKAAGTSA 194 E QYAEMWAQDA AMYGYAG +A T+VTPF P TT+P+ A Q ++VA+AAGTSA Sbjct 121 QLETQYAEMWAQDATAMYGYAGQAAPVTQVTPFTRPAETTNPAGEAMQAASVAQAAGTSA 180 Query 195 GAAQSAIAELIAHLPNTLLGLTSPLSSALTAAATPGWLEW---FINW--YLPISQLFYNT 249 G A+SA ++L++ +P TL L+SP ++ LE F W Y +Q NT Sbjct 181 G-AESAQSQLLSSVPPTLQALSSPAAANTELPPITDVLEQNPVFDMWAEYASPAQ---NT 236 Query 250 VGLPYFAIGIGNSLITSWRALGWIGPEAAEAAAAAPA--AVGAAV----GGTGPVSAGLG 303 + + Y G+ ++ + L A+E A AA + AVGA++ GG G +SA L Sbjct 237 LAMMYRVTGMSTHFLSLSKGLAPAAKAASEGAKAAASLPAVGASLRGLTGGGGAISATLA 296 Query 304 NAATIGKLSLPPNWAGAS-PSLAPTVGSASAPLVSDIVEQPEAGAAGNLLGGMPLAGSGT 362 +AA +G LS+PP W A+ P++A G++S P VS + PE GNLLGGMPLAG G Sbjct 297 SAAPVGGLSVPPAWTSAAGPAVA--SGASSIP-VSRFITTPETSGPGNLLGGMPLAGVGG 353 Query 363 GTGGAGPRYGFRVTVMSRPPFAG 385 G+ GAGPRYG R TVM+RPPFAG Sbjct 354 GSTGAGPRYGIRPTVMARPPFAG 376 >gi|240172022|ref|ZP_04750681.1| PPE family protein [Mycobacterium kansasii ATCC 12478] Length=365 Score = 249 bits (635), Expect = 7e-64, Method: Compositional matrix adjust. Identities = 199/348 (58%), Positives = 236/348 (68%), Gaps = 26/348 (7%) Query 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60 MDFGALPPEVNSGRMY GPGSAPM AAA+AWN LA ELS AA GYE V+T L +EEW+GP Sbjct 1 MDFGALPPEVNSGRMYSGPGSAPMAAAATAWNSLAVELSSAARGYEAVVTQLSSEEWMGP 60 Query 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120 AS M EAVAPYVAW A A AEQAA+QARAAAAA+ETAFAA+VPPPLIAANRA+L Sbjct 61 ASATMAEAVAPYVAWTGAAATHAEQAAAQARAAAAAFETAFAAVVPPPLIAANRAQLAQA 120 Query 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180 + NVFGQNT+ IAA EAQY EMWAQDA AMY YAG+SA A VTPF PP TSP+A A Sbjct 121 IATNVFGQNTSVIAALEAQYGEMWAQDAAAMYSYAGNSAHAAAVTPFTSPPQITSPTAQA 180 Query 181 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLTSPLS-------------------- 220 Q +AVA A GTSAG+AQ + + ++ +P TL GL +P++ Sbjct 181 GQTAAVAAATGTSAGSAQQTLNQFLSAIPTTLGGLAAPVTGPIGTEVGFLQSAQGPLTGL 240 Query 221 -SALTAAAT-PGWLEWFINWYLPISQLFYNTVGLPYFAIGIGNSLITSWRALGWI----G 274 L +T P + F+ Y P + FYNT GLPYF+IG+ N+ + S + LG I Sbjct 241 WQVLFGTSTFPNSISGFLTAYTPYAGFFYNTEGLPYFSIGMANNFVQSAKTLGLIGGSAP 300 Query 275 PEAAEAAAAAPAAVGAAVGGTGPVSAGLGNAATIGKLSLPPNWAGASP 322 AA AAA +G +GG G VS GLGNAA++GKLS+PP W+G P Sbjct 301 AAAAGAAAKGLPGLGGLLGGGGSVSGGLGNAASVGKLSVPPVWSGQLP 348 >gi|240171295|ref|ZP_04749954.1| PPE family protein [Mycobacterium kansasii ATCC 12478] Length=400 Score = 246 bits (629), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 218/406 (54%), Positives = 268/406 (67%), Gaps = 27/406 (6%) Query 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60 MD+G LPPEVNS RMY GPGS M AAASAW+ LAAEL AA GYE ++ L E WLGP Sbjct 1 MDYGGLPPEVNSARMYTGPGSMSMTAAASAWSALAAELDSAAAGYETLVDQLAGEGWLGP 60 Query 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120 AST M AVAPYV WMRATA QAEQ A QARAAAAAYE A AA+VPPP I ANR +L L Sbjct 61 ASTAMAAAVAPYVVWMRATAAQAEQTAMQARAAAAAYENAVAAMVPPPAILANRLQLAEL 120 Query 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180 + NV+GQNT++IAA EAQY +MWAQDA AMY YA ++ +AT +TPF PP+ +P+ A+ Sbjct 121 MQSNVYGQNTSAIAALEAQYGQMWAQDATAMYEYAAATGSATTLTPFNQPPHIVNPAGAS 180 Query 181 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLTSPLSSALTAAATPGWLEWFINW-- 238 Q +AV AA TSAGA+QSA+A LI+ +P L GL +P++SA++++ WL W I + Sbjct 181 GQTAAVTHAAATSAGASQSALARLISGIPTMLQGLATPVASAVSSSPL-AWL-WQILFGT 238 Query 239 -------------YLPISQLFYNTVGLPYFAIGIGNSLITSWR----ALGWIGPEAAEAA 281 P + YNT GLPYF+IG+ N+ + S + G A AA Sbjct 239 STFPTSIAALLTDLQPYASFLYNTEGLPYFSIGMANNFVQSSKTLGLLGGTAAAAAGGAA 298 Query 282 AAAPAAVGAAVGGTGPVSAGLGNAATIGKLSLPPNWAGASPSLAPTVGSASAPL-VSDIV 340 A +G+ VGG GPVSAGLG+A +IG+LS+PP+WA A P V S A + V Sbjct 299 QGGLAGLGSLVGGGGPVSAGLGHAGSIGRLSVPPSWAQA----LPDVESIPARMPVETFK 354 Query 341 EQPEAGAAGNLLGGMPLAGSGT-GTGGAGPRYGFRVTVMSRPPFAG 385 P+A +GNLLGGMPL G G G+GPRYG R TVM+RPPFAG Sbjct 355 FAPDAAGSGNLLGGMPLGGPMGHGATGSGPRYGVRPTVMARPPFAG 400 >gi|183982678|ref|YP_001850969.1| PPE family protein, PPE26 [Mycobacterium marinum M] gi|183176004|gb|ACC41114.1| PPE family protein, PPE26 [Mycobacterium marinum M] Length=408 Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 203/414 (50%), Positives = 255/414 (62%), Gaps = 37/414 (8%) Query 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60 MD+G LPPEV S MY GPGS+ MVAAASAWN LAAEL+ A GY VIT L +EEW+GP Sbjct 3 MDYGMLPPEVTSALMYAGPGSSSMVAAASAWNALAAELNSTAQGYLTVITQLSSEEWMGP 62 Query 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120 AS M +AV PY+ WM TA QAE AA+QA++AAAA+ETAFAA+VPPPLIA NRA LT Sbjct 63 ASATMAQAVEPYMTWMSVTAGQAEHAATQAQSAAAAFETAFAAVVPPPLIATNRAELTQA 122 Query 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180 + N+FG N IA EAQYAEMWAQDA AMY YA SSA ATK+ F P +P+A+ Sbjct 123 LQTNMFGLNNGVIAQLEAQYAEMWAQDASAMYNYAASSALATKIESFTEAPTIANPAAST 182 Query 181 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLTSP-----LSSALTAA--------- 226 TQ +AV+ A TSA + QS + ++ + + L L SP S L A+ Sbjct 183 TQGAAVSAAQATSAASTQSTVQSFLSQITSQLGQLASPSGTQSFVSQLGASNPILTEIWF 242 Query 227 ------ATPGWLEWFINWYLPISQLFYNTVGLPYFAIGIGNSLITSWRALGWIGPEAAEA 280 P L F+ Y + FYNT GLPYF++G+GN + + LG I AA A Sbjct 243 LLTGQTVLPNNLGTFMQGYSNYASFFYNTEGLPYFSVGMGNFGVQMAKTLGLITQPAAAA 302 Query 281 AAAAPAA------VGAAVGGTGPVSAGLGNAATIGKLSLPPNWAGAS--PSLAPTVGSAS 332 AAA P +GA V+AGLG+ A +G L++P +W GAS ++ PTV + S Sbjct 303 AAALPKVPGLGGALGAIGSAGSQVAAGLGSGAHVGHLAVPASWPGASVAEAVRPTVQAVS 362 Query 333 APLVSDIVEQPEAGAAGNLLGGMPLAGSGTGTG-GAGPRYGFRVTVMSRPPFAG 385 P+ S PE A N++GGMP+ +G G G G+GPRYGF+ TVM+RP AG Sbjct 363 EPITS-----PE---AANVIGGMPVGATGAGRGVGSGPRYGFKPTVMARPLPAG 408 >gi|342861307|ref|ZP_08717955.1| PPE family protein [Mycobacterium colombiense CECT 3035] gi|342131207|gb|EGT84488.1| PPE family protein [Mycobacterium colombiense CECT 3035] Length=417 Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 195/424 (46%), Positives = 243/424 (58%), Gaps = 46/424 (10%) Query 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60 MDFGALPPE+NSGRMY GPGS PM+AAA+AW+GL AELS AA GY VI+ L W+GP Sbjct 1 MDFGALPPEINSGRMYAGPGSGPMMAAAAAWDGLGAELSSAASGYTSVISELTHAPWVGP 60 Query 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120 AS+ M+ AV PYV+W+ A QAE+ A QARAAAAA+E AFA VPPP+IAANR L +L Sbjct 61 ASSSMLSAVTPYVSWLSVLAAQAEETAGQARAAAAAFEAAFAMTVPPPVIAANRVLLANL 120 Query 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180 V N GQNT +IAATEAQY EMWAQDA AMYGYAGSSA A+++ P PPNTT+P A + Sbjct 121 VATNFLGQNTPAIAATEAQYMEMWAQDAAAMYGYAGSSAVASELPPLTSPPNTTTPEADS 180 Query 181 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTL-LGLTSPL--SSALTAAATPG---WLEW 234 Q +AVAKA AG ++L P L G T + +S T A PG WL+ Sbjct 181 DQAAAVAKAVAEPAGNTAQTTSQLAT--PQALSAGATQAVTQASTTTTATQPGPFTWLQN 238 Query 235 FINWYL------PISQ-----------LFYNTVGLPYFAIGIGNSLITSWRALGWIGPEA 277 IN +L P + L T GL YF+ GI + + + L + Sbjct 239 LINGFLTSGLPTPTNNYAGLNTGMYGTLLKQTTGLAYFSTGITSFWSSIAQQLTFGPGGT 298 Query 278 AEAA----------AAAPAAVGAAVGGTGPVSAGLGNAATIGKLSLPPNWAGASPSLAPT 327 A A+ VG G VSAG+G A +G LS+P +WA + S++P Sbjct 299 TAGAGGAWFPTPQFASLGLGNLGGVGHVGAVSAGVGQAGRVGMLSVPQHWATLTSSVSPA 358 Query 328 VGSASAPLVSDIVEQPEAGAAGN----LLGGMPLAGSGTGTGGAG--PRYGFRVTVMSRP 381 S A + Q AG A + LL GMP+ G AG +YGFR +V++RP Sbjct 359 ALSEEATPI-----QAAAGGANSPANGLLRGMPVGSIGRRGAAAGYVNKYGFRYSVLTRP 413 Query 382 PFAG 385 P AG Sbjct 414 PSAG 417 >gi|148661613|ref|YP_001283136.1| PPE family protein [Mycobacterium tuberculosis H37Ra] gi|167967398|ref|ZP_02549675.1| PPE family protein [Mycobacterium tuberculosis H37Ra] gi|307084422|ref|ZP_07493535.1| PPE family protein [Mycobacterium tuberculosis SUMu012] gi|7478807|pir||H70931 probable PPE protein - Mycobacterium tuberculosis (strain H37RV) gi|148505765|gb|ABQ73574.1| PPE family protein [Mycobacterium tuberculosis H37Ra] gi|308365982|gb|EFP54833.1| PPE family protein [Mycobacterium tuberculosis SUMu012] Length=403 Score = 239 bits (611), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 208/407 (52%), Positives = 260/407 (64%), Gaps = 30/407 (7%) Query 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60 +DF LPPE+NS RMY G GSAPM+AAASAW+GL+AEL +A+ Y V++TL EEW GP Sbjct 5 LDFATLPPEINSARMYSGAGSAPMLAAASAWHGLSAELRASALSYSSVLSTLTGEEWHGP 64 Query 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120 AS M A APYVAWM TA++AEQA +QA AAAAAYE AFAA VPPP+I ANRA+L +L Sbjct 65 ASASMTAAAAPYVAWMSVTAVRAEQAGAQAEAAAAAYEAAFAATVPPPVIEANRAQLMAL 124 Query 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180 + NV GQN +IAATEAQYAEMW+QDAMAMYGYAG+SA AT++TPF P TT+ S A Sbjct 125 IATNVLGQNAPAIAATEAQYAEMWSQDAMAMYGYAGASAAATQLTPFTEPVQTTNASGLA 184 Query 181 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLTSPLSSALTAAATP----------- 229 Q +A+A A G SAGA Q+ +++LIA +P+ L GL+S S+A T A+ P Sbjct 185 AQSAAIAHATGASAGAQQTTLSQLIAAIPSVLQGLSS--STAATFASGPSGLLGIVGSGS 242 Query 230 GWLEWFINWYLPISQLFYNTVG-----LPYFAIGIGNSLITSWRALGWIGPEAAEAAA-- 282 WL+ P S F+NT+ LP I L+ A G EA + Sbjct 243 SWLDKLWALLDPNSN-FWNTIASSGLFLPSNTIAPFLGLLGGVAAADAAGDVLGEATSGG 301 Query 283 ---AAPAAVGAAVGGTGPVSAGLGNAATIGKLSLPPNWAGASPSLAPTVGSASAPLVSDI 339 A A +G+A G G V+AGLGNAAT+G LS+PP+W A+P LA +GSA + + Sbjct 302 LGGALVAPLGSAGGLGGTVAAGLGNAATVGTLSVPPSWTAAAP-LASPLGSALG--GTPM 358 Query 340 VEQPEAGAAGNLLGGMPLAG-SGTGTGGAGPRYGFRVTVMSRPPFAG 385 V P A AAG + GMP G G G A P+YGFR ++RPP AG Sbjct 359 VAPPPAVAAG--MPGMPFGTMGGQGFGRAVPQYGFRPNFVARPPAAG 403 >gi|118618470|ref|YP_906802.1| PPE family protein [Mycobacterium ulcerans Agy99] gi|118570580|gb|ABL05331.1| PPE family protein [Mycobacterium ulcerans Agy99] Length=406 Score = 239 bits (610), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 200/410 (49%), Positives = 252/410 (62%), Gaps = 37/410 (9%) Query 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60 MD+G LPPEV S MY GPGS+ MVAAASAWN LAAEL+ A GY VIT L +EEW+GP Sbjct 1 MDYGMLPPEVTSALMYAGPGSSSMVAAASAWNALAAELNSTAQGYLTVITQLSSEEWMGP 60 Query 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120 AS M +AV P++ WM TA QAE AA+QA++AAAA+ETAFAA+VPPPLIA N A LT Sbjct 61 ASATMAQAVEPFMTWMSVTAGQAEHAATQAQSAAAAFETAFAAVVPPPLIATNLAELTQA 120 Query 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180 + N+FG N IA EAQYAEMWAQDA AMY YA SSA ATK+ F P SP+A+ Sbjct 121 LQTNMFGLNNGVIAQLEAQYAEMWAQDASAMYNYAASSALATKIESFTEAPTIASPAAST 180 Query 181 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLTSP-----LSSALTAA--------- 226 TQ +AV+ A TSA + QS + ++ + + L L SP S L A+ Sbjct 181 TQGAAVSAAQATSAASTQSTVQSFLSQITSQLGQLASPSGTQSFVSQLGASNPILTEIWF 240 Query 227 ------ATPGWLEWFINWYLPISQLFYNTVGLPYFAIGIGNSLITSWRALGWIGPEAAEA 280 P L F+ Y + FYNT GLPYF++G+GN + + LG I AA A Sbjct 241 LLTGQTVLPNNLGTFMQGYSNYASFFYNTEGLPYFSVGMGNFGVQMAKTLGLITQPAAAA 300 Query 281 AAAAPAA------VGAAVGGTGPVSAGLGNAATIGKLSLPPNWAGAS--PSLAPTVGSAS 332 AAA P +GA V+AGLG+ A +G L++P +W GAS ++ PTV + S Sbjct 301 AAALPKVPGLGGALGAIGSAGSQVAAGLGSGAHVGHLAVPASWPGASVAEAVRPTVQAVS 360 Query 333 APLVSDIVEQPEAGAAGNLLGGMPLAGSGTGTG-GAGPRYGFRVTVMSRP 381 P+ S PE A N++GGMP+ +G G G G+GPRYGF+ TVM+RP Sbjct 361 EPITS-----PE---AANVIGGMPVGATGAGRGVGSGPRYGFKPTVMARP 402 >gi|57116920|ref|YP_177653.1| PPE family protein [Mycobacterium tuberculosis H37Rv] gi|38684069|emb|CAE55432.1| PPE FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv] Length=399 Score = 239 bits (609), Expect = 7e-61, Method: Compositional matrix adjust. Identities = 208/407 (52%), Positives = 260/407 (64%), Gaps = 30/407 (7%) Query 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60 +DF LPPE+NS RMY G GSAPM+AAASAW+GL+AEL +A+ Y V++TL EEW GP Sbjct 1 LDFATLPPEINSARMYSGAGSAPMLAAASAWHGLSAELRASALSYSSVLSTLTGEEWHGP 60 Query 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120 AS M A APYVAWM TA++AEQA +QA AAAAAYE AFAA VPPP+I ANRA+L +L Sbjct 61 ASASMTAAAAPYVAWMSVTAVRAEQAGAQAEAAAAAYEAAFAATVPPPVIEANRAQLMAL 120 Query 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180 + NV GQN +IAATEAQYAEMW+QDAMAMYGYAG+SA AT++TPF P TT+ S A Sbjct 121 IATNVLGQNAPAIAATEAQYAEMWSQDAMAMYGYAGASAAATQLTPFTEPVQTTNASGLA 180 Query 181 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLTSPLSSALTAAATP----------- 229 Q +A+A A G SAGA Q+ +++LIA +P+ L GL+S S+A T A+ P Sbjct 181 AQSAAIAHATGASAGAQQTTLSQLIAAIPSVLQGLSS--STAATFASGPSGLLGIVGSGS 238 Query 230 GWLEWFINWYLPISQLFYNTVG-----LPYFAIGIGNSLITSWRALGWIGPEAAEAAA-- 282 WL+ P S F+NT+ LP I L+ A G EA + Sbjct 239 SWLDKLWALLDPNSN-FWNTIASSGLFLPSNTIAPFLGLLGGVAAADAAGDVLGEATSGG 297 Query 283 ---AAPAAVGAAVGGTGPVSAGLGNAATIGKLSLPPNWAGASPSLAPTVGSASAPLVSDI 339 A A +G+A G G V+AGLGNAAT+G LS+PP+W A+P LA +GSA + + Sbjct 298 LGGALVAPLGSAGGLGGTVAAGLGNAATVGTLSVPPSWTAAAP-LASPLGSALG--GTPM 354 Query 340 VEQPEAGAAGNLLGGMPLAG-SGTGTGGAGPRYGFRVTVMSRPPFAG 385 V P A AAG + GMP G G G A P+YGFR ++RPP AG Sbjct 355 VAPPPAVAAG--MPGMPFGTMGGQGFGRAVPQYGFRPNFVARPPAAG 399 >gi|183981478|ref|YP_001849769.1| PPE family protein [Mycobacterium marinum M] gi|183174804|gb|ACC39914.1| PPE family protein [Mycobacterium marinum M] Length=427 Score = 239 bits (609), Expect = 7e-61, Method: Compositional matrix adjust. Identities = 171/350 (49%), Positives = 208/350 (60%), Gaps = 27/350 (7%) Query 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60 MDFGALPPE+NSGRMY GPGS PM+AAA W+ LAAEL A GY + L W GP Sbjct 1 MDFGALPPEINSGRMYVGPGSGPMLAAAVVWDELAAELYATAAGYRSTLDGLTGGSWRGP 60 Query 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120 AS M A APYVAWM ATA QAE A SQA+ AA+AYETAFAA VPPP+IAANRA L L Sbjct 61 ASASMAAAAAPYVAWMTATAAQAELAGSQAKVAASAYETAFAATVPPPVIAANRALLMGL 120 Query 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180 V N+FGQNT +IAATEA YAEMWAQDA AMY YAGSSATAT+VTPF PP TSPS A Sbjct 121 VFTNIFGQNTPAIAATEAHYAEMWAQDAAAMYAYAGSSATATQVTPFTEPPQITSPSGAV 180 Query 181 TQLSAVAKAAGTSAGAAQSA-IAELIAHLPNTLLGLTSPLSSALTAAATP------GWLE 233 +Q +AV +AA SA + +A ++ LIA +PN L G+ + + A A P G + Sbjct 181 SQAAAVTEAATASASSDITAQLSPLIAVVPNALQGMATSGNPAAAIAGLPDVALPAGIIT 240 Query 234 WFINWYLPISQLF--YNTVGL------PYFAIG---------IGNSLITS--WRALGWIG 274 N+ + L + GL P+ A G +G S +G + Sbjct 241 DLQNFTTILDTLDGPFTIQGLTGVPGGPFLAFGQVYAFSQNMVGAQAFFSPAEPVIGGLA 300 Query 275 PEAAEAAAAAPAAVGAAVGGTGPVSAGLGNAATIGKLSLPPNWAGASPSL 324 P A EA A A V G S +G+AA +G +S+P W +P++ Sbjct 301 PLAGEANLGA-AGVVGGPSVGGQASGAMGHAALVGNMSVPQGWTQEAPAI 349 >gi|342861308|ref|ZP_08717956.1| PPE family protein [Mycobacterium colombiense CECT 3035] gi|342131208|gb|EGT84489.1| PPE family protein [Mycobacterium colombiense CECT 3035] Length=410 Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 193/412 (47%), Positives = 242/412 (59%), Gaps = 30/412 (7%) Query 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60 +D+GA PPE NS R+Y GPGS+ + AASAW+ LAAEL+ AA+ YE+V+T+L +EEW G Sbjct 2 VDYGAFPPEFNSARIYSGPGSSSLATAASAWSSLAAELNSAALSYEKVVTSLSSEEWTGA 61 Query 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120 AS M +A P+V WM +TA QAE+AA+QA +AA+AYETA ++ VPPPLIA+NR + T L Sbjct 62 ASAEMAQAAEPFVEWMTSTAAQAEEAATQAHSAASAYETALSSSVPPPLIASNRTQATEL 121 Query 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180 NV GQNT IA EAQY E WAQDA AMY YAG S++ATKV+ F P T+P+ A Sbjct 122 HAKNVLGQNTPLIAQLEAQYGEYWAQDAAAMYRYAGQSSSATKVSQFRKAPQVTNPAGKA 181 Query 181 TQLSAVAKAAGTS---------------AGAAQSAIAELIAHLPNTLLGLTSPLSSA--- 222 TQ +AV A TS S A T P+S A Sbjct 182 TQSAAVTNATTTSPASNTPKALAAASSGTSGGSSGSAAAGGASSAATKSSTDPMSEAWFL 241 Query 223 LTAAAT-PGWLEWFINWYLPISQLFYNTVGLPYFAIGIGNSLITSWRALGWIG---PEAA 278 LT ++ P L +N Y P + LFYNT GLPYF+ G+ NS +++G IG P A Sbjct 242 LTGQSSFPSNLGSLVNGYSPFAGLFYNTEGLPYFSTGMANSFTQIAKSVGAIGGAAPAVA 301 Query 279 E--AAAAAPAAVGAAVGGTGPVSAGLGNAATI-GKLSLPPNWAGASPSLAPTVGSASAPL 335 + + A LG A ++ GKLS+P W+GAS AP VG A Sbjct 302 KALPGLGGLGGMLGGGAAAAHPVAALGGATSVGGKLSVPITWSGAS-GAAPAVGHAVP-- 358 Query 336 VSDIVEQPE-AGAAGNLLGGMPLA-GSGTGTGGAGPRYGFRVTVMSRPPFAG 385 VS + PE AG GNLLGGMPL+ G G AGP+YGFR TVM+RPPFAG Sbjct 359 VSSVSAAPEAAGEPGNLLGGMPLSGAGAGGHGVAGPKYGFRPTVMARPPFAG 410 >gi|31792996|ref|NP_855489.1| PPE family protein [Mycobacterium bovis AF2122/97] gi|121637709|ref|YP_977932.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|31618587|emb|CAD94539.1| PPE FAMILY PROTEIN [Mycobacterium bovis AF2122/97] gi|121493356|emb|CAL71827.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] Length=399 Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 206/407 (51%), Positives = 258/407 (64%), Gaps = 30/407 (7%) Query 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60 MDF LPPE+NS RMY G GSAPM+AAASAW+GL+AEL +A+ Y V++TL EEW GP Sbjct 1 MDFATLPPEINSARMYSGAGSAPMLAAASAWHGLSAELRASALSYSSVLSTLTGEEWHGP 60 Query 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120 AS M A APYVAWM TA++AEQA +QA AAAAAYE AFAA VPPP+I ANRA+L +L Sbjct 61 ASASMTAAAAPYVAWMSVTAVRAEQAGAQAEAAAAAYEAAFAATVPPPVIEANRAQLMAL 120 Query 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180 + NV GQN +IAATEAQYAEMW+QDAMAMYGYAG+SA AT++TPF P TT+ S A Sbjct 121 IATNVLGQNAPAIAATEAQYAEMWSQDAMAMYGYAGASAAATQLTPFTEPVQTTNASGLA 180 Query 181 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLT-----------SPLSSALTAAATP 229 Q +A+A A G SAGA Q+ +++LIA +P+ L GL+ S L L + ++ Sbjct 181 AQSAAIAHATGASAGAQQTTLSQLIAAIPSVLQGLSSSTAATSASGPSGLLGILGSGSS- 239 Query 230 GWLEWFINWYLPISQLFYNTVG-----LPYFAIGIGNSLITSWRALGWIGPEAAEAAA-- 282 WL+ P S F+NT+ LP I L+ A G EA + Sbjct 240 -WLDKLWALLDPNSN-FWNTIASSGLFLPSNTIAPFLGLLGGVAAADAAGDVLGEATSGG 297 Query 283 ---AAPAAVGAAVGGTGPVSAGLGNAATIGKLSLPPNWAGASPSLAPTVGSASAPLVSDI 339 A A +G+A G G V+AGLGNAAT+G LS+PP+W A+P LA +GSA + + Sbjct 298 LGGALVAPLGSAGGLGGTVAAGLGNAATVGTLSVPPSWTAAAP-LASPLGSALG--GTPM 354 Query 340 VEQPEAGAAGNLLGGMPLAG-SGTGTGGAGPRYGFRVTVMSRPPFAG 385 V P A AAG + GMP G G G A P+YGFR ++RPP AG Sbjct 355 VAPPPAVAAG--MPGMPFGTMGGQGFGRAVPQYGFRPNFVARPPAAG 399 >gi|306776024|ref|ZP_07414361.1| PPE family protein [Mycobacterium tuberculosis SUMu001] gi|306972134|ref|ZP_07484795.1| PPE family protein [Mycobacterium tuberculosis SUMu010] gi|307079844|ref|ZP_07489014.1| PPE family protein [Mycobacterium tuberculosis SUMu011] gi|308215518|gb|EFO74917.1| PPE family protein [Mycobacterium tuberculosis SUMu001] gi|308358394|gb|EFP47245.1| PPE family protein [Mycobacterium tuberculosis SUMu010] gi|308362330|gb|EFP51181.1| PPE family protein [Mycobacterium tuberculosis SUMu011] Length=403 Score = 233 bits (594), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 206/405 (51%), Positives = 257/405 (64%), Gaps = 26/405 (6%) Query 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60 +DF LPPE+NS RMY G GSAPM+AAASAW+GL+AEL +A+ Y V++TL EEW GP Sbjct 5 LDFATLPPEINSARMYSGAGSAPMLAAASAWHGLSAELRASALSYSSVLSTLTGEEWHGP 64 Query 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120 AS M A APYVAWM TA++AEQA +QA AAAAAYE AFAA VPPP+I ANRA+L +L Sbjct 65 ASASMTAAAAPYVAWMSVTAVRAEQAGAQAEAAAAAYEAAFAATVPPPVIEANRAQLMAL 124 Query 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180 + NV GQN +IAATEAQYAEMW+QDAMAMYGYAG+SA AT++TPF P TT+ S A Sbjct 125 IATNVLGQNAPAIAATEAQYAEMWSQDAMAMYGYAGASAAATQLTPFTEPVQTTNASGLA 184 Query 181 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLTSPLS-------SALTAAATPG--W 231 Q +A+A A G SAGA Q+ +++LIA +P+ L GL+S + S L G W Sbjct 185 AQSAAIAHATGASAGAQQTTLSQLIAAIPSVLQGLSSSTAATSASGPSGLLGIVGSGSSW 244 Query 232 LEWFINWYLPISQLFYNTVG-----LPYFAIGIGNSLITSWRALGWIGPEAAEAAA---- 282 L+ P S F+NT+ LP I L+ A G EA + Sbjct 245 LDKLWALLDPNSN-FWNTIASSGLFLPSNTIAPFLGLLGGVAAADAAGDVLGEATSGGLG 303 Query 283 -AAPAAVGAAVGGTGPVSAGLGNAATIGKLSLPPNWAGASPSLAPTVGSASAPLVSDIVE 341 A A +G+A G G V+AGLGNAAT+G LS+PP+W A+P LA +GSA + +V Sbjct 304 GALVAPLGSAGGLGGTVAAGLGNAATVGTLSVPPSWTAAAP-LASPLGSALG--GTPMVA 360 Query 342 QPEAGAAGNLLGGMPLAG-SGTGTGGAGPRYGFRVTVMSRPPFAG 385 P A AAG + GMP G G G A P+YGFR ++RPP AG Sbjct 361 PPPAVAAG--MPGMPFGTMGGQGFGRAVPQYGFRPNFVARPPAAG 403 >gi|289447421|ref|ZP_06437165.1| PPE family protein [Mycobacterium tuberculosis CPHL_A] gi|289420379|gb|EFD17580.1| PPE family protein [Mycobacterium tuberculosis CPHL_A] Length=403 Score = 233 bits (594), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 205/407 (51%), Positives = 258/407 (64%), Gaps = 30/407 (7%) Query 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60 +DF LPPE+NS RMY G GSAPM+AAASAW+GL+AEL +A+ Y V++TL EEW GP Sbjct 5 LDFATLPPEINSARMYSGAGSAPMLAAASAWHGLSAELRASALSYSSVLSTLTGEEWHGP 64 Query 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120 AS M A APYVAWM TA++AEQA +QA AAAAAYE AFAA VPPP+I ANRA+L +L Sbjct 65 ASASMTAAAAPYVAWMSVTAVRAEQAGAQAEAAAAAYEAAFAATVPPPVIEANRAQLMAL 124 Query 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180 + NV GQN +IAATEAQYAEMW+QDAMAMYGYAG+SA AT++TPF P TT+ S A Sbjct 125 IATNVLGQNAPAIAATEAQYAEMWSQDAMAMYGYAGASAAATQLTPFTEPVQTTNASGLA 184 Query 181 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLT-----------SPLSSALTAAATP 229 Q +A+A A G SAGA Q+ +++LIA +P+ L GL+ S L L + ++ Sbjct 185 AQSAAIAYATGASAGAQQTTLSQLIAAIPSVLQGLSSSTAATSASGPSGLLGILGSGSS- 243 Query 230 GWLEWFINWYLPISQLFYNTVG-----LPYFAIGIGNSLITSWRALGWIGPEAAEAAA-- 282 WL+ P S F+NT+ LP I L+ A G EA + Sbjct 244 -WLDKLWALLDPNSN-FWNTIASSGLFLPSNTIAPFLGLLGGVAAADAAGDVLGEATSGG 301 Query 283 ---AAPAAVGAAVGGTGPVSAGLGNAATIGKLSLPPNWAGASPSLAPTVGSASAPLVSDI 339 A A +G+A G G V+AGLGNAAT+G LS+PP+W A+P LA +GSA + + Sbjct 302 LGGALVAPLGSAGGLGGTVAAGLGNAATVGTLSVPPSWTAAAP-LASPLGSALG--GTPM 358 Query 340 VEQPEAGAAGNLLGGMPLAG-SGTGTGGAGPRYGFRVTVMSRPPFAG 385 V P A AAG + GMP G G G A P+YGFR ++RPP AG Sbjct 359 VAPPPAVAAG--MPGMPFGTMGGQGFGRAVPQYGFRPNFVARPPAAG 403 >gi|289761957|ref|ZP_06521335.1| predicted protein [Mycobacterium tuberculosis GM 1503] gi|289709463|gb|EFD73479.1| predicted protein [Mycobacterium tuberculosis GM 1503] Length=403 Score = 233 bits (594), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 204/407 (51%), Positives = 257/407 (64%), Gaps = 30/407 (7%) Query 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60 +DF LPPE+NS RMY G GSAPM+AAASAW+GL+AEL +A+ Y V++TL EEW GP Sbjct 5 LDFATLPPEINSARMYSGAGSAPMLAAASAWHGLSAELRASALSYSSVLSTLTGEEWHGP 64 Query 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120 AS M A APYVAWM TA++AEQA +QA AAAAYE AFAA VPPP+I ANRA+L +L Sbjct 65 ASASMTAAAAPYVAWMSVTAVRAEQAGAQAEGAAAAYEAAFAATVPPPVIEANRAQLMAL 124 Query 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180 + NV GQN +IAATEAQYAEMW+QDAMAMYGYAG+SA AT++TPF P TT+ S A Sbjct 125 IATNVLGQNAPAIAATEAQYAEMWSQDAMAMYGYAGASAAATQLTPFTEPVQTTNASGLA 184 Query 181 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLT-----------SPLSSALTAAATP 229 Q +A+A A G SAGA Q+ +++LIA +P+ L GL+ S L L + ++ Sbjct 185 AQSAAIAHATGASAGAQQTTLSQLIAAIPSVLQGLSSSTAATSASGPSGLLGILGSGSS- 243 Query 230 GWLEWFINWYLPISQLFYNTVG-----LPYFAIGIGNSLITSWRALGWIGPEAAEAAA-- 282 WL+ P S F+NT+ LP I L+ A G EA + Sbjct 244 -WLDKLWALLDPNSN-FWNTIASSGLFLPSNTIAPFLGLLGGVAAADAAGDVLGEATSGG 301 Query 283 ---AAPAAVGAAVGGTGPVSAGLGNAATIGKLSLPPNWAGASPSLAPTVGSASAPLVSDI 339 A A +G+A G G V+AGLGNAAT+G LS+PP+W A+P LA +GSA + + Sbjct 302 LGGALVAPLGSAGGLGGTVAAGLGNAATVGTLSVPPSWTAAAP-LASPLGSALG--GTPM 358 Query 340 VEQPEAGAAGNLLGGMPLAG-SGTGTGGAGPRYGFRVTVMSRPPFAG 385 V P A AAG + GMP G G G A P+YGFR ++RPP AG Sbjct 359 VAPPPAVAAG--MPGMPFGTMGGQGFGRAVPQYGFRPNFVARPPAAG 403 >gi|15841277|ref|NP_336314.1| PPE family protein [Mycobacterium tuberculosis CDC1551] gi|148823020|ref|YP_001287774.1| PPE family protein [Mycobacterium tuberculosis F11] gi|224990193|ref|YP_002644880.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172] 49 more sequence titles Length=403 Score = 233 bits (594), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 205/407 (51%), Positives = 258/407 (64%), Gaps = 30/407 (7%) Query 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60 +DF LPPE+NS RMY G GSAPM+AAASAW+GL+AEL +A+ Y V++TL EEW GP Sbjct 5 LDFATLPPEINSARMYSGAGSAPMLAAASAWHGLSAELRASALSYSSVLSTLTGEEWHGP 64 Query 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120 AS M A APYVAWM TA++AEQA +QA AAAAAYE AFAA VPPP+I ANRA+L +L Sbjct 65 ASASMTAAAAPYVAWMSVTAVRAEQAGAQAEAAAAAYEAAFAATVPPPVIEANRAQLMAL 124 Query 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180 + NV GQN +IAATEAQYAEMW+QDAMAMYGYAG+SA AT++TPF P TT+ S A Sbjct 125 IATNVLGQNAPAIAATEAQYAEMWSQDAMAMYGYAGASAAATQLTPFTEPVQTTNASGLA 184 Query 181 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLT-----------SPLSSALTAAATP 229 Q +A+A A G SAGA Q+ +++LIA +P+ L GL+ S L L + ++ Sbjct 185 AQSAAIAHATGASAGAQQTTLSQLIAAIPSVLQGLSSSTAATSASGPSGLLGILGSGSS- 243 Query 230 GWLEWFINWYLPISQLFYNTVG-----LPYFAIGIGNSLITSWRALGWIGPEAAEAAA-- 282 WL+ P S F+NT+ LP I L+ A G EA + Sbjct 244 -WLDKLWALLDPNSN-FWNTIASSGLFLPSNTIAPFLGLLGGVAAADAAGDVLGEATSGG 301 Query 283 ---AAPAAVGAAVGGTGPVSAGLGNAATIGKLSLPPNWAGASPSLAPTVGSASAPLVSDI 339 A A +G+A G G V+AGLGNAAT+G LS+PP+W A+P LA +GSA + + Sbjct 302 LGGALVAPLGSAGGLGGTVAAGLGNAATVGTLSVPPSWTAAAP-LASPLGSALG--GTPM 358 Query 340 VEQPEAGAAGNLLGGMPLAG-SGTGTGGAGPRYGFRVTVMSRPPFAG 385 V P A AAG + GMP G G G A P+YGFR ++RPP AG Sbjct 359 VAPPPAVAAG--MPGMPFGTMGGQGFGRAVPQYGFRPNFVARPPAAG 403 >gi|326903411|gb|EGE50344.1| LOW QUALITY PROTEIN: PPE family protein [Mycobacterium tuberculosis W-148] Length=399 Score = 233 bits (593), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 205/407 (51%), Positives = 258/407 (64%), Gaps = 30/407 (7%) Query 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60 +DF LPPE+NS RMY G GSAPM+AAASAW+GL+AEL +A+ Y V++TL EEW GP Sbjct 1 LDFATLPPEINSARMYSGAGSAPMLAAASAWHGLSAELRASALSYSSVLSTLTGEEWHGP 60 Query 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120 AS M A APYVAWM TA++AEQA +QA AAAAAYE AFAA VPPP+I ANRA+L +L Sbjct 61 ASASMTAAAAPYVAWMSVTAVRAEQAGAQAEAAAAAYEAAFAATVPPPVIEANRAQLMAL 120 Query 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180 + NV GQN +IAATEAQYAEMW+QDAMAMYGYAG+SA AT++TPF P TT+ S A Sbjct 121 IATNVLGQNAPAIAATEAQYAEMWSQDAMAMYGYAGASAAATQLTPFTEPVQTTNASGLA 180 Query 181 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLT-----------SPLSSALTAAATP 229 Q +A+A A G SAGA Q+ +++LIA +P+ L GL+ S L L + ++ Sbjct 181 AQSAAIAHATGASAGAQQTTLSQLIAAIPSVLQGLSSSTAATSASGPSGLLGILGSGSS- 239 Query 230 GWLEWFINWYLPISQLFYNTVG-----LPYFAIGIGNSLITSWRALGWIGPEAAEAAA-- 282 WL+ P S F+NT+ LP I L+ A G EA + Sbjct 240 -WLDKLWALLDPNSN-FWNTIASSGLFLPSNTIAPFLGLLGGVAAADAAGDVLGEATSGG 297 Query 283 ---AAPAAVGAAVGGTGPVSAGLGNAATIGKLSLPPNWAGASPSLAPTVGSASAPLVSDI 339 A A +G+A G G V+AGLGNAAT+G LS+PP+W A+P LA +GSA + + Sbjct 298 LGGALVAPLGSAGGLGGTVAAGLGNAATVGTLSVPPSWTAAAP-LASPLGSALG--GTPM 354 Query 340 VEQPEAGAAGNLLGGMPLAG-SGTGTGGAGPRYGFRVTVMSRPPFAG 385 V P A AAG + GMP G G G A P+YGFR ++RPP AG Sbjct 355 VAPPPAVAAG--MPGMPFGTMGGQGFGRAVPQYGFRPNFVARPPAAG 399 >gi|341601736|emb|CCC64409.1| PPE family protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=403 Score = 232 bits (591), Expect = 9e-59, Method: Compositional matrix adjust. Identities = 205/407 (51%), Positives = 258/407 (64%), Gaps = 30/407 (7%) Query 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60 +DF LPPE+NS RMY G GSAPM+AAASAW+GL+AEL +A+ Y V++TL EEW GP Sbjct 5 LDFMTLPPEINSARMYSGAGSAPMLAAASAWHGLSAELRASALSYSSVLSTLTGEEWHGP 64 Query 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120 AS M A APYVAWM TA++AEQA +QA AAAAAYE AFAA VPPP+I ANRA+L +L Sbjct 65 ASASMTAAAAPYVAWMSVTAVRAEQAGAQAEAAAAAYEAAFAATVPPPVIEANRAQLMAL 124 Query 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180 + NV GQN +IAATEAQYAEMW+QDAMAMYGYAG+SA AT++TPF P TT+ S A Sbjct 125 IATNVLGQNAPAIAATEAQYAEMWSQDAMAMYGYAGASAAATQLTPFTEPVQTTNASGLA 184 Query 181 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLT-----------SPLSSALTAAATP 229 Q +A+A A G SAGA Q+ +++LIA +P+ L GL+ S L L + ++ Sbjct 185 AQSAAIAHATGASAGAQQTTLSQLIAAIPSVLQGLSSSTAATSASGPSGLLGILGSGSS- 243 Query 230 GWLEWFINWYLPISQLFYNTVG-----LPYFAIGIGNSLITSWRALGWIGPEAAEAAA-- 282 WL+ P S F+NT+ LP I L+ A G EA + Sbjct 244 -WLDKLWALLDPNSN-FWNTIASSGLFLPSNTIAPFLGLLGGVAAADAAGDVLGEATSGG 301 Query 283 ---AAPAAVGAAVGGTGPVSAGLGNAATIGKLSLPPNWAGASPSLAPTVGSASAPLVSDI 339 A A +G+A G G V+AGLGNAAT+G LS+PP+W A+P LA +GSA + + Sbjct 302 LGGALVAPLGSAGGLGGTVAAGLGNAATVGTLSVPPSWTAAAP-LASPLGSALG--GTPM 358 Query 340 VEQPEAGAAGNLLGGMPLAG-SGTGTGGAGPRYGFRVTVMSRPPFAG 385 V P A AAG + GMP G G G A P+YGFR ++RPP AG Sbjct 359 VAPPPAVAAG--MPGMPFGTMGGQGFGRAVPQYGFRPNFVARPPAAG 403 >gi|289574484|ref|ZP_06454711.1| PPE family protein [Mycobacterium tuberculosis K85] gi|289538915|gb|EFD43493.1| PPE family protein [Mycobacterium tuberculosis K85] Length=403 Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 205/407 (51%), Positives = 257/407 (64%), Gaps = 30/407 (7%) Query 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60 +DF LPPE+NS RMY G GSAPM+AAASAW+GL+AEL +A+ Y V++TL EEW GP Sbjct 5 LDFATLPPEINSARMYSGAGSAPMLAAASAWHGLSAELRASALSYSSVLSTLTGEEWHGP 64 Query 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120 AS M A APYVAWM TA++AEQA +QA AAAAAYE AFAA VPPP+I ANRA+L +L Sbjct 65 ASASMTAAAAPYVAWMSVTAVRAEQAGAQAEAAAAAYEAAFAATVPPPVIEANRAQLMAL 124 Query 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180 + NV GQN +IAATEAQYAEMW+QDAMAMYGYAG+SA AT +TPF P TT+ S A Sbjct 125 IATNVLGQNAPAIAATEAQYAEMWSQDAMAMYGYAGASAAATPLTPFTEPVQTTNASGLA 184 Query 181 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLT-----------SPLSSALTAAATP 229 Q +A+A A G SAGA Q+ +++LIA +P+ L GL+ S L L + ++ Sbjct 185 AQSAAIAHATGASAGAQQTTLSQLIAAIPSVLQGLSSSTAATSASGPSGLLGILGSGSS- 243 Query 230 GWLEWFINWYLPISQLFYNTVG-----LPYFAIGIGNSLITSWRALGWIGPEAAEAAA-- 282 WL+ P S F+NT+ LP I L+ A G EA + Sbjct 244 -WLDKLWALLDPNSN-FWNTIASSGLFLPSNTIAPFLGLLGGVAAADAAGDVLGEATSGG 301 Query 283 ---AAPAAVGAAVGGTGPVSAGLGNAATIGKLSLPPNWAGASPSLAPTVGSASAPLVSDI 339 A A +G+A G G V+AGLGNAAT+G LS+PP+W A+P LA +GSA + + Sbjct 302 LGGALVAPLGSAGGLGGTVAAGLGNAATVGTLSVPPSWTAAAP-LASPLGSALG--GTPM 358 Query 340 VEQPEAGAAGNLLGGMPLAG-SGTGTGGAGPRYGFRVTVMSRPPFAG 385 V P A AAG + GMP G G G A P+YGFR ++RPP AG Sbjct 359 VAPPPAVAAG--MPGMPFGTMGGQGFGRAVPQYGFRPNFVARPPAAG 403 >gi|254821012|ref|ZP_05226013.1| PPE family protein, PPE31 [Mycobacterium intracellulare ATCC 13950] gi|212596828|gb|ACJ35609.1| PPE48 [Mycobacterium intracellulare ATCC 13950] Length=389 Score = 230 bits (586), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 197/403 (49%), Positives = 245/403 (61%), Gaps = 34/403 (8%) Query 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60 +DF LPPE+NS RMY GPGS PM+ AASAWNGLAAEL AA+ Y +++L +EEW GP Sbjct 3 VDFATLPPEINSARMYAGPGSGPMLVAASAWNGLAAELRSAALSYGSALSSLTSEEWHGP 62 Query 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120 AS MV A PYVAWM TA QAEQAA+QA AAAAAYE AFAA VPPP IAANRA+L +L Sbjct 63 ASAAMVAAATPYVAWMSTTATQAEQAATQAEAAAAAYEAAFAATVPPPAIAANRAQLATL 122 Query 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180 + NV GQNT +IAATEAQY EMWAQDA MYGYAGSSA AT++ F P TTS A Sbjct 123 IATNVLGQNTPAIAATEAQYGEMWAQDAATMYGYAGSSAAATRLPMFTDPTQTTSQDGQA 182 Query 181 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLTSPLSSALTAAATPGWLEWFINWYL 240 Q +AVA+A GTSAG Q+ +++L +PN L L+SP S+ + + + L Sbjct 183 RQAAAVAQATGTSAGNQQATVSQLNTAVPNALQTLSSPTESSTGSTSGLSSI-------L 235 Query 241 PISQLFYNTVGLPYFAIGIGN-----SLITSWRALGWIGPEAAEAAAAAPAAVG------ 289 + F+NT+ + G + +TS +G + A+ AP A G Sbjct 236 DPNSNFWNTI----TSTGALDPAQVVQTVTSSTLIGASTSALNDLASGAPVATGIGTSAQ 291 Query 290 -----AAVGGTG-PVSAGLGNAATIGKLSLPPNWAGASPSLAPTVGSASAPLVSDIVEQP 343 A VG G VSAGLG A+ +G LS+PP+WA +P +P SA + +V P Sbjct 292 SLSGLAGVGNAGASVSAGLGRASLVGPLSVPPSWAPPAPVASPL---PSALGGTPMVAPP 348 Query 344 EAGAAGNLLGGMPLAGSGT-GTGGAGPRYGFRVTVMSRPPFAG 385 A AAG + GMP + G G G A P+YGFR + RPP AG Sbjct 349 PAMAAG--MPGMPFSPMGNHGLGRAVPQYGFRPNFVVRPPAAG 389 >gi|340627882|ref|YP_004746334.1| PPE family protein [Mycobacterium canettii CIPT 140010059] gi|340006072|emb|CCC45244.1| PPE family protein [Mycobacterium canettii CIPT 140010059] Length=408 Score = 229 bits (583), Expect = 7e-58, Method: Compositional matrix adjust. Identities = 193/423 (46%), Positives = 243/423 (58%), Gaps = 53/423 (12%) Query 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60 MDFG LPPE+NSGRMY GPGS PM+AAA+AW+ LAAEL +AA GY I+ L W+GP Sbjct 1 MDFGVLPPEINSGRMYAGPGSGPMMAAAAAWDSLAAELGLAAGGYRLAISELTGAYWVGP 60 Query 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120 A+ MV AV PYVAW+ ATA QAEQA QARAAAAAYE AFA VPPP++ ANRA L +L Sbjct 61 AAASMVAAVTPYVAWLSATAGQAEQAGMQARAAAAAYELAFAMTVPPPVVVANRALLVAL 120 Query 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180 V N FGQNT +IAATEAQYAEMWAQDA AMY YAGS+A AT++TPF P P TTSP+A A Sbjct 121 VATNFFGQNTPAIAATEAQYAEMWAQDAAAMYTYAGSAAIATELTPFTPAPVTTSPAALA 180 Query 181 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLTSPLSSALTAAATPGWLEWFINWYL 240 Q +A + A +A+ +L+ L +T L P SAL WL + Sbjct 181 GQAAATVSST-VPPVATTAAVPQLLQQLSSTSL---IPWYSALQQ-----WLAENLLGLT 231 Query 241 PISQL-FYNTVGLPYFAIGI----------------------GNSLITSWRALGWIGPEA 277 P +++ +G+ YF G+ G+S++ SW + GP A Sbjct 232 PDNRMTIVRLLGISYFDEGLLQFEASLAQQAIPGTPGGAGDSGSSVLDSWGPTIFAGPRA 291 Query 278 AEAAAAAP--------------AAVGAAVGGTGPVSAGLGNAATIGKLSLPPNWAGASPS 323 + + A A ++GG+ VSA LG ++ G LS+PP+WA + Sbjct 292 SPSVAGGGAVGGVQTPQPYWYWALDRESIGGS--VSAALGKGSSAGSLSVPPDWAARARW 349 Query 324 LAPTVGSASAPLVSDIVEQPEAGAAGNLLGGMPLAGSGTGTGGAG-PRYGFRVTVMSRPP 382 P A+ L D V A LL G P+A +G TGG +YGFR+ VM RPP Sbjct 350 ANP----AAWRLPGDDVTALRGTAENALLRGFPMASAGQSTGGGFVHKYGFRLAVMQRPP 405 Query 383 FAG 385 FAG Sbjct 406 FAG 408 Lambda K H 0.314 0.126 0.379 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 749688914200 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40