BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1710
Length=231
Score E
Sequences producing significant alignments: (Bits) Value
gi|15608848|ref|NP_216226.1| hypothetical protein Rv1710 [Mycoba... 450 7e-125
gi|306779714|ref|ZP_07418051.1| hypothetical protein TMBG_00253 ... 450 8e-125
gi|340626717|ref|YP_004745169.1| hypothetical protein MCAN_17211... 449 2e-124
gi|326903325|gb|EGE50258.1| chromosome segregation and condensat... 443 9e-123
gi|158431537|pdb|2Z99|A Chain A, Crystal Structure Of Scpb From ... 417 6e-115
gi|240173129|ref|ZP_04751787.1| hypothetical protein MkanA1_2770... 382 3e-104
gi|296164606|ref|ZP_06847173.1| segregation and condensation pro... 373 1e-101
gi|118466801|ref|YP_882250.1| segregation and condensation prote... 364 6e-99
gi|342860717|ref|ZP_08717367.1| segregation and condensation pro... 364 6e-99
gi|336457864|gb|EGO36858.1| segregation and condensation protein... 363 1e-98
gi|41407510|ref|NP_960346.1| hypothetical protein MAP1412 [Mycob... 361 6e-98
gi|254818896|ref|ZP_05223897.1| segregation and condensation pro... 358 4e-97
gi|15827714|ref|NP_301977.1| hypothetical protein ML1369 [Mycoba... 356 2e-96
gi|467154|gb|AAA50918.1| unknown [Mycobacterium leprae] 356 2e-96
gi|118618583|ref|YP_906915.1| transcriptional regulator [Mycobac... 348 4e-94
gi|333990502|ref|YP_004523116.1| transcriptional regulator [Myco... 332 2e-89
gi|118471424|ref|YP_888040.1| transcriptional regulator [Mycobac... 323 2e-86
gi|145224080|ref|YP_001134758.1| putative transcriptional regula... 317 8e-85
gi|126435524|ref|YP_001071215.1| condensin subunit ScpB [Mycobac... 314 5e-84
gi|108799896|ref|YP_640093.1| condensin subunit ScpB [Mycobacter... 312 2e-83
gi|120404252|ref|YP_954081.1| putative transcriptional regulator... 296 2e-78
gi|289745852|ref|ZP_06505230.1| segregation and condensation pro... 283 1e-74
gi|169629455|ref|YP_001703104.1| putative segregation and conden... 274 8e-72
gi|289554517|ref|ZP_06443727.1| conserved hypothetical protein [... 272 2e-71
gi|229494823|ref|ZP_04388577.1| segregation and condensation pro... 264 6e-69
gi|343928408|ref|ZP_08767856.1| chromosome segregation and conde... 261 4e-68
gi|226360074|ref|YP_002777852.1| chromosome segregation and cond... 260 1e-67
gi|111017943|ref|YP_700915.1| hypothetical protein RHA1_ro00926 ... 259 2e-67
gi|226306744|ref|YP_002766704.1| chromosome segregation and cond... 255 5e-66
gi|326384758|ref|ZP_08206435.1| segregation and condensation pro... 251 7e-65
gi|296140074|ref|YP_003647317.1| chromosome segregation and cond... 243 1e-62
gi|257056523|ref|YP_003134355.1| condensin subunit ScpB [Sacchar... 238 8e-61
gi|256379431|ref|YP_003103091.1| chromosome segregation and cond... 231 6e-59
gi|312139847|ref|YP_004007183.1| chromosome segregation and cond... 228 6e-58
gi|325674276|ref|ZP_08153965.1| segregation and condensation pro... 227 1e-57
gi|54023978|ref|YP_118220.1| hypothetical protein nfa20100 [Noca... 225 4e-57
gi|302528006|ref|ZP_07280348.1| segregation and condensation pro... 223 2e-56
gi|319949183|ref|ZP_08023272.1| chromosome segregation and conde... 221 7e-56
gi|300787859|ref|YP_003768150.1| segregation and condensation pr... 218 6e-55
gi|262202717|ref|YP_003273925.1| segregation and condensation pr... 214 7e-54
gi|295839694|ref|ZP_06826627.1| segregation and condensation pro... 202 2e-50
gi|300781240|ref|ZP_07091094.1| segregation and condensation pro... 201 5e-50
gi|302550432|ref|ZP_07302774.1| segregation and condensation pro... 200 1e-49
gi|297198682|ref|ZP_06916079.1| segregation and condensation pro... 200 1e-49
gi|291440522|ref|ZP_06579912.1| transcriptional regulator [Strep... 200 2e-49
gi|302546512|ref|ZP_07298854.1| segregation and condensation pro... 199 2e-49
gi|284991417|ref|YP_003409971.1| chromosome segregation and cond... 199 2e-49
gi|258654178|ref|YP_003203334.1| chromosome segregation and cond... 199 3e-49
gi|318061410|ref|ZP_07980131.1| ScpB-like chromosome partitionin... 199 4e-49
gi|29833053|ref|NP_827687.1| transcriptional regulator [Streptom... 198 5e-49
>gi|15608848|ref|NP_216226.1| hypothetical protein Rv1710 [Mycobacterium tuberculosis H37Rv]
gi|15841170|ref|NP_336207.1| hypothetical protein MT1751 [Mycobacterium tuberculosis CDC1551]
gi|31792897|ref|NP_855390.1| hypothetical protein Mb1737 [Mycobacterium bovis AF2122/97]
57 more sequence titles
Length=231
Score = 450 bits (1158), Expect = 7e-125, Method: Compositional matrix adjust.
Identities = 230/231 (99%), Positives = 231/231 (100%), Gaps = 0/231 (0%)
Query 1 VTEHMPEHDPSYGIPDIAEPAELDADELKRVLEALLLVIDTPVTADALAAATEQPVYRVA 60
+TEHMPEHDPSYGIPDIAEPAELDADELKRVLEALLLVIDTPVTADALAAATEQPVYRVA
Sbjct 1 MTEHMPEHDPSYGIPDIAEPAELDADELKRVLEALLLVIDTPVTADALAAATEQPVYRVA 60
Query 61 AKLQLMADELTGRDSGIDLRHTSEGWRMYTRARFAPYVEKLLLDGARTKLTRAALETLAV 120
AKLQLMADELTGRDSGIDLRHTSEGWRMYTRARFAPYVEKLLLDGARTKLTRAALETLAV
Sbjct 61 AKLQLMADELTGRDSGIDLRHTSEGWRMYTRARFAPYVEKLLLDGARTKLTRAALETLAV 120
Query 121 VAYRQPVTRARVSAVRGVNVDAVMRTLLARGLITEVGTDADTGAVTFATTELFLERLGLT 180
VAYRQPVTRARVSAVRGVNVDAVMRTLLARGLITEVGTDADTGAVTFATTELFLERLGLT
Sbjct 121 VAYRQPVTRARVSAVRGVNVDAVMRTLLARGLITEVGTDADTGAVTFATTELFLERLGLT 180
Query 181 SLSELPDIAPLLPDVDTIDDLSESLDSEPRFIKLTGELASEQTLSFDVDRD 231
SLSELPDIAPLLPDVDTIDDLSESLDSEPRFIKLTGELASEQTLSFDVDRD
Sbjct 181 SLSELPDIAPLLPDVDTIDDLSESLDSEPRFIKLTGELASEQTLSFDVDRD 231
>gi|306779714|ref|ZP_07418051.1| hypothetical protein TMBG_00253 [Mycobacterium tuberculosis SUMu002]
gi|306784448|ref|ZP_07422770.1| hypothetical protein TMCG_03411 [Mycobacterium tuberculosis SUMu003]
gi|306788814|ref|ZP_07427136.1| hypothetical protein TMDG_03428 [Mycobacterium tuberculosis SUMu004]
13 more sequence titles
Length=231
Score = 450 bits (1157), Expect = 8e-125, Method: Compositional matrix adjust.
Identities = 229/231 (99%), Positives = 231/231 (100%), Gaps = 0/231 (0%)
Query 1 VTEHMPEHDPSYGIPDIAEPAELDADELKRVLEALLLVIDTPVTADALAAATEQPVYRVA 60
+TEHMPEHDPSYGIPDIAEPAELDADELKRVLEALLLVIDTPVTADALAAATEQP+YRVA
Sbjct 1 MTEHMPEHDPSYGIPDIAEPAELDADELKRVLEALLLVIDTPVTADALAAATEQPIYRVA 60
Query 61 AKLQLMADELTGRDSGIDLRHTSEGWRMYTRARFAPYVEKLLLDGARTKLTRAALETLAV 120
AKLQLMADELTGRDSGIDLRHTSEGWRMYTRARFAPYVEKLLLDGARTKLTRAALETLAV
Sbjct 61 AKLQLMADELTGRDSGIDLRHTSEGWRMYTRARFAPYVEKLLLDGARTKLTRAALETLAV 120
Query 121 VAYRQPVTRARVSAVRGVNVDAVMRTLLARGLITEVGTDADTGAVTFATTELFLERLGLT 180
VAYRQPVTRARVSAVRGVNVDAVMRTLLARGLITEVGTDADTGAVTFATTELFLERLGLT
Sbjct 121 VAYRQPVTRARVSAVRGVNVDAVMRTLLARGLITEVGTDADTGAVTFATTELFLERLGLT 180
Query 181 SLSELPDIAPLLPDVDTIDDLSESLDSEPRFIKLTGELASEQTLSFDVDRD 231
SLSELPDIAPLLPDVDTIDDLSESLDSEPRFIKLTGELASEQTLSFDVDRD
Sbjct 181 SLSELPDIAPLLPDVDTIDDLSESLDSEPRFIKLTGELASEQTLSFDVDRD 231
>gi|340626717|ref|YP_004745169.1| hypothetical protein MCAN_17211 [Mycobacterium canettii CIPT
140010059]
gi|340004907|emb|CCC44053.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=231
Score = 449 bits (1155), Expect = 2e-124, Method: Compositional matrix adjust.
Identities = 229/231 (99%), Positives = 231/231 (100%), Gaps = 0/231 (0%)
Query 1 VTEHMPEHDPSYGIPDIAEPAELDADELKRVLEALLLVIDTPVTADALAAATEQPVYRVA 60
+TEHMPEHDPSYGIPDIAEPAELDADELKRVLEALLLVIDTPVTA+ALAAATEQPVYRVA
Sbjct 1 MTEHMPEHDPSYGIPDIAEPAELDADELKRVLEALLLVIDTPVTAEALAAATEQPVYRVA 60
Query 61 AKLQLMADELTGRDSGIDLRHTSEGWRMYTRARFAPYVEKLLLDGARTKLTRAALETLAV 120
AKLQLMADELTGRDSGIDLRHTSEGWRMYTRARFAPYVEKLLLDGARTKLTRAALETLAV
Sbjct 61 AKLQLMADELTGRDSGIDLRHTSEGWRMYTRARFAPYVEKLLLDGARTKLTRAALETLAV 120
Query 121 VAYRQPVTRARVSAVRGVNVDAVMRTLLARGLITEVGTDADTGAVTFATTELFLERLGLT 180
VAYRQPVTRARVSAVRGVNVDAVMRTLLARGLITEVGTDADTGAVTFATTELFLERLGLT
Sbjct 121 VAYRQPVTRARVSAVRGVNVDAVMRTLLARGLITEVGTDADTGAVTFATTELFLERLGLT 180
Query 181 SLSELPDIAPLLPDVDTIDDLSESLDSEPRFIKLTGELASEQTLSFDVDRD 231
SLSELPDIAPLLPDVDTIDDLSESLDSEPRFIKLTGELASEQTLSFDVDRD
Sbjct 181 SLSELPDIAPLLPDVDTIDDLSESLDSEPRFIKLTGELASEQTLSFDVDRD 231
>gi|326903325|gb|EGE50258.1| chromosome segregation and condensation protein ScpB [Mycobacterium
tuberculosis W-148]
Length=227
Score = 443 bits (1140), Expect = 9e-123, Method: Compositional matrix adjust.
Identities = 227/227 (100%), Positives = 227/227 (100%), Gaps = 0/227 (0%)
Query 5 MPEHDPSYGIPDIAEPAELDADELKRVLEALLLVIDTPVTADALAAATEQPVYRVAAKLQ 64
MPEHDPSYGIPDIAEPAELDADELKRVLEALLLVIDTPVTADALAAATEQPVYRVAAKLQ
Sbjct 1 MPEHDPSYGIPDIAEPAELDADELKRVLEALLLVIDTPVTADALAAATEQPVYRVAAKLQ 60
Query 65 LMADELTGRDSGIDLRHTSEGWRMYTRARFAPYVEKLLLDGARTKLTRAALETLAVVAYR 124
LMADELTGRDSGIDLRHTSEGWRMYTRARFAPYVEKLLLDGARTKLTRAALETLAVVAYR
Sbjct 61 LMADELTGRDSGIDLRHTSEGWRMYTRARFAPYVEKLLLDGARTKLTRAALETLAVVAYR 120
Query 125 QPVTRARVSAVRGVNVDAVMRTLLARGLITEVGTDADTGAVTFATTELFLERLGLTSLSE 184
QPVTRARVSAVRGVNVDAVMRTLLARGLITEVGTDADTGAVTFATTELFLERLGLTSLSE
Sbjct 121 QPVTRARVSAVRGVNVDAVMRTLLARGLITEVGTDADTGAVTFATTELFLERLGLTSLSE 180
Query 185 LPDIAPLLPDVDTIDDLSESLDSEPRFIKLTGELASEQTLSFDVDRD 231
LPDIAPLLPDVDTIDDLSESLDSEPRFIKLTGELASEQTLSFDVDRD
Sbjct 181 LPDIAPLLPDVDTIDDLSESLDSEPRFIKLTGELASEQTLSFDVDRD 227
>gi|158431537|pdb|2Z99|A Chain A, Crystal Structure Of Scpb From Mycobacterium Tuberculosis
Length=219
Score = 417 bits (1072), Expect = 6e-115, Method: Compositional matrix adjust.
Identities = 217/219 (99%), Positives = 217/219 (99%), Gaps = 0/219 (0%)
Query 13 GIPDIAEPAELDADELKRVLEALLLVIDTPVTADALAAATEQPVYRVAAKLQLMADELTG 72
G DIAEPAELDADELKRVLEALLLVIDTPVTADALAAATEQPVYRVAAKLQLMADELTG
Sbjct 1 GHMDIAEPAELDADELKRVLEALLLVIDTPVTADALAAATEQPVYRVAAKLQLMADELTG 60
Query 73 RDSGIDLRHTSEGWRMYTRARFAPYVEKLLLDGARTKLTRAALETLAVVAYRQPVTRARV 132
RDSGIDLRHTSEGWRMYTRARFAPYVEKLLLDGARTKLTRAALETLAVVAYRQPVTRARV
Sbjct 61 RDSGIDLRHTSEGWRMYTRARFAPYVEKLLLDGARTKLTRAALETLAVVAYRQPVTRARV 120
Query 133 SAVRGVNVDAVMRTLLARGLITEVGTDADTGAVTFATTELFLERLGLTSLSELPDIAPLL 192
SAVRGVNVDAVMRTLLARGLITEVGTDADTGAVTFATTELFLERLGLTSLSELPDIAPLL
Sbjct 121 SAVRGVNVDAVMRTLLARGLITEVGTDADTGAVTFATTELFLERLGLTSLSELPDIAPLL 180
Query 193 PDVDTIDDLSESLDSEPRFIKLTGELASEQTLSFDVDRD 231
PDVDTIDDLSESLDSEPRFIKLTGELASEQTLSFDVDRD
Sbjct 181 PDVDTIDDLSESLDSEPRFIKLTGELASEQTLSFDVDRD 219
>gi|240173129|ref|ZP_04751787.1| hypothetical protein MkanA1_27701 [Mycobacterium kansasii ATCC
12478]
Length=235
Score = 382 bits (980), Expect = 3e-104, Method: Compositional matrix adjust.
Identities = 198/235 (85%), Positives = 213/235 (91%), Gaps = 4/235 (1%)
Query 1 VTEHMPEHDPSY----GIPDIAEPAELDADELKRVLEALLLVIDTPVTADALAAATEQPV 56
+T+ P+ D Y GIPDIAEP E+ DEL RVLEALLLV+DTPVTA+ALA ATEQPV
Sbjct 1 MTDDAPDQDLGYAMSSGIPDIAEPTEMHPDELGRVLEALLLVVDTPVTAEALATATEQPV 60
Query 57 YRVAAKLQLMADELTGRDSGIDLRHTSEGWRMYTRARFAPYVEKLLLDGARTKLTRAALE 116
YRVAAKL+LMADELT RDSGIDLRH+SEGWR+YTRARFAPYVEKLLLDGARTKLTRAALE
Sbjct 61 YRVAAKLRLMADELTERDSGIDLRHSSEGWRLYTRARFAPYVEKLLLDGARTKLTRAALE 120
Query 117 TLAVVAYRQPVTRARVSAVRGVNVDAVMRTLLARGLITEVGTDADTGAVTFATTELFLER 176
TLAVVAYRQPVTRARVSAVRGVNVDAVMRTLLARGLITEVGTD DTGAVTFAT++LFLER
Sbjct 121 TLAVVAYRQPVTRARVSAVRGVNVDAVMRTLLARGLITEVGTDEDTGAVTFATSDLFLER 180
Query 177 LGLTSLSELPDIAPLLPDVDTIDDLSESLDSEPRFIKLTGELASEQTLSFDVDRD 231
LGLT+LSELPD+APLLPDVDTIDDLS SLDSEPRFIKL G S+QTL+FDVD D
Sbjct 181 LGLTALSELPDLAPLLPDVDTIDDLSASLDSEPRFIKLAGGQPSDQTLTFDVDND 235
>gi|296164606|ref|ZP_06847173.1| segregation and condensation protein B [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295900025|gb|EFG79464.1| segregation and condensation protein B [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=231
Score = 373 bits (957), Expect = 1e-101, Method: Compositional matrix adjust.
Identities = 192/231 (84%), Positives = 208/231 (91%), Gaps = 0/231 (0%)
Query 1 VTEHMPEHDPSYGIPDIAEPAELDADELKRVLEALLLVIDTPVTADALAAATEQPVYRVA 60
+++ +PE D GIPDIAE A +DA+EL VLEALLLV+DTPVTA+AL AAT+QPVYRVA
Sbjct 1 MSDELPEVDLDVGIPDIAEAAPMDAEELGSVLEALLLVVDTPVTAEALGAATQQPVYRVA 60
Query 61 AKLQLMADELTGRDSGIDLRHTSEGWRMYTRARFAPYVEKLLLDGARTKLTRAALETLAV 120
A+LQ MADELT RDSGIDLR T EGWR+YTRARFAPYVEKLLLDGAR+KLTRAALETLAV
Sbjct 61 ARLQQMADELTERDSGIDLRQTGEGWRLYTRARFAPYVEKLLLDGARSKLTRAALETLAV 120
Query 121 VAYRQPVTRARVSAVRGVNVDAVMRTLLARGLITEVGTDADTGAVTFATTELFLERLGLT 180
VAYRQPVTRARVSAVRGVNVDAVMRTLLARGLITE G D DTGAVTFATTELFLERLGLT
Sbjct 121 VAYRQPVTRARVSAVRGVNVDAVMRTLLARGLITEAGVDDDTGAVTFATTELFLERLGLT 180
Query 181 SLSELPDIAPLLPDVDTIDDLSESLDSEPRFIKLTGELASEQTLSFDVDRD 231
SL++LPDIAPLLPDVDTI+DLSESLDSEPRFIKL G SEQ L+FDVD D
Sbjct 181 SLADLPDIAPLLPDVDTIEDLSESLDSEPRFIKLAGGQPSEQALTFDVDHD 231
>gi|118466801|ref|YP_882250.1| segregation and condensation protein B [Mycobacterium avium 104]
gi|254775518|ref|ZP_05217034.1| segregation and condensation protein B [Mycobacterium avium subsp.
avium ATCC 25291]
gi|118168088|gb|ABK68985.1| segregation and condensation protein B [Mycobacterium avium 104]
Length=235
Score = 364 bits (934), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 185/219 (85%), Positives = 202/219 (93%), Gaps = 0/219 (0%)
Query 13 GIPDIAEPAELDADELKRVLEALLLVIDTPVTADALAAATEQPVYRVAAKLQLMADELTG 72
GIP+IAE A +++ EL VLEALLLV+DTPVTA+ALAAAT+QPVYR+A KLQ MADELT
Sbjct 17 GIPEIAEAAPMESGELGSVLEALLLVVDTPVTAEALAAATQQPVYRIATKLQEMADELTA 76
Query 73 RDSGIDLRHTSEGWRMYTRARFAPYVEKLLLDGARTKLTRAALETLAVVAYRQPVTRARV 132
RDSGIDLR TSEGWRMYTRARFAPYVEKLLLDGAR+KLTRAALETLAVVAYRQPVTRARV
Sbjct 77 RDSGIDLRKTSEGWRMYTRARFAPYVEKLLLDGARSKLTRAALETLAVVAYRQPVTRARV 136
Query 133 SAVRGVNVDAVMRTLLARGLITEVGTDADTGAVTFATTELFLERLGLTSLSELPDIAPLL 192
SAVRGVNVDAVMRTLLARGLITE G D DTGA TFATT+LFLERLGLTSL++LPDIAPLL
Sbjct 137 SAVRGVNVDAVMRTLLARGLITEAGVDEDTGATTFATTDLFLERLGLTSLADLPDIAPLL 196
Query 193 PDVDTIDDLSESLDSEPRFIKLTGELASEQTLSFDVDRD 231
PDVDTI+DLSESLDSEPRF+KL+G AS+ LSFDVD+D
Sbjct 197 PDVDTIEDLSESLDSEPRFVKLSGGQASDAALSFDVDQD 235
>gi|342860717|ref|ZP_08717367.1| segregation and condensation protein B [Mycobacterium colombiense
CECT 3035]
gi|342131741|gb|EGT84998.1| segregation and condensation protein B [Mycobacterium colombiense
CECT 3035]
Length=231
Score = 364 bits (934), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 185/231 (81%), Positives = 209/231 (91%), Gaps = 0/231 (0%)
Query 1 VTEHMPEHDPSYGIPDIAEPAELDADELKRVLEALLLVIDTPVTADALAAATEQPVYRVA 60
++E +PE D IPDIAE ++ +EL VLEALLLV+DTPVTA+ALA+AT+QPVYRVA
Sbjct 1 MSEELPEIDLDSPIPDIAEAVPMEPEELGCVLEALLLVVDTPVTAEALASATQQPVYRVA 60
Query 61 AKLQLMADELTGRDSGIDLRHTSEGWRMYTRARFAPYVEKLLLDGARTKLTRAALETLAV 120
KLQ M+++LT RDSGIDLR SEGWRMYTRARFAPYVEKLLLDGAR+KLTRAALETLAV
Sbjct 61 TKLQEMSEQLTERDSGIDLRQNSEGWRMYTRARFAPYVEKLLLDGARSKLTRAALETLAV 120
Query 121 VAYRQPVTRARVSAVRGVNVDAVMRTLLARGLITEVGTDADTGAVTFATTELFLERLGLT 180
VAYRQPVTRARVSAVRGVNVDAVMRTLLARGLITE G D DTGAVTFATT+LFLERLGLT
Sbjct 121 VAYRQPVTRARVSAVRGVNVDAVMRTLLARGLITEAGVDDDTGAVTFATTDLFLERLGLT 180
Query 181 SLSELPDIAPLLPDVDTIDDLSESLDSEPRFIKLTGELASEQTLSFDVDRD 231
SL++LPDIAPLLPDVDTI+DLSESLDSEPRFIKL+G +S+Q+L+FDVD+D
Sbjct 181 SLADLPDIAPLLPDVDTIEDLSESLDSEPRFIKLSGGQSSDQSLTFDVDQD 231
>gi|336457864|gb|EGO36858.1| segregation and condensation protein B [Mycobacterium avium subsp.
paratuberculosis S397]
Length=235
Score = 363 bits (931), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 184/219 (85%), Positives = 202/219 (93%), Gaps = 0/219 (0%)
Query 13 GIPDIAEPAELDADELKRVLEALLLVIDTPVTADALAAATEQPVYRVAAKLQLMADELTG 72
GIP+IAE A +++ EL VLEALLLV+DTPVTA+ALAAAT+QPVYR+A KLQ MADELT
Sbjct 17 GIPEIAEAAPMESGELGSVLEALLLVVDTPVTAEALAAATQQPVYRIATKLQEMADELTA 76
Query 73 RDSGIDLRHTSEGWRMYTRARFAPYVEKLLLDGARTKLTRAALETLAVVAYRQPVTRARV 132
RDSGIDLR TSEGWRMYTRARFAPYVEKLLLDGAR+KLTRAALETLAVVAYRQPVTRARV
Sbjct 77 RDSGIDLRKTSEGWRMYTRARFAPYVEKLLLDGARSKLTRAALETLAVVAYRQPVTRARV 136
Query 133 SAVRGVNVDAVMRTLLARGLITEVGTDADTGAVTFATTELFLERLGLTSLSELPDIAPLL 192
SAVRGVNVDAVMRTLLARGLITE G D DTGA TFATT+LFLERLGLTSL++LPDIAPLL
Sbjct 137 SAVRGVNVDAVMRTLLARGLITEAGVDEDTGATTFATTDLFLERLGLTSLADLPDIAPLL 196
Query 193 PDVDTIDDLSESLDSEPRFIKLTGELASEQTLSFDVDRD 231
PDVDTI+DLSESLDSEPRF+KL+G AS+ L+FDVD+D
Sbjct 197 PDVDTIEDLSESLDSEPRFVKLSGGQASDAALTFDVDQD 235
>gi|41407510|ref|NP_960346.1| hypothetical protein MAP1412 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41395863|gb|AAS03729.1| hypothetical protein MAP_1412 [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=235
Score = 361 bits (926), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 183/219 (84%), Positives = 201/219 (92%), Gaps = 0/219 (0%)
Query 13 GIPDIAEPAELDADELKRVLEALLLVIDTPVTADALAAATEQPVYRVAAKLQLMADELTG 72
GIP+IAE A +++ EL VLEALLLV+DTPVTA+ALAAAT+QPVYR+A KLQ MADELT
Sbjct 17 GIPEIAEAAPMESGELGSVLEALLLVVDTPVTAEALAAATQQPVYRIATKLQEMADELTA 76
Query 73 RDSGIDLRHTSEGWRMYTRARFAPYVEKLLLDGARTKLTRAALETLAVVAYRQPVTRARV 132
RDSGIDLR TSEGWRMYTRARFAPYVEKLLLDGAR+KLTRAALETLAVVAYRQPV RARV
Sbjct 77 RDSGIDLRKTSEGWRMYTRARFAPYVEKLLLDGARSKLTRAALETLAVVAYRQPVARARV 136
Query 133 SAVRGVNVDAVMRTLLARGLITEVGTDADTGAVTFATTELFLERLGLTSLSELPDIAPLL 192
SAVRGVNVDAVMRTLLARGLITE G D DTGA TFATT+LFLERLGLTSL++LPDIAPLL
Sbjct 137 SAVRGVNVDAVMRTLLARGLITEAGVDEDTGATTFATTDLFLERLGLTSLADLPDIAPLL 196
Query 193 PDVDTIDDLSESLDSEPRFIKLTGELASEQTLSFDVDRD 231
PDVDTI+DLSESLDSEPRF+KL+G AS+ L+FDVD+D
Sbjct 197 PDVDTIEDLSESLDSEPRFVKLSGGQASDAALTFDVDQD 235
>gi|254818896|ref|ZP_05223897.1| segregation and condensation protein B [Mycobacterium intracellulare
ATCC 13950]
Length=242
Score = 358 bits (918), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 182/225 (81%), Positives = 204/225 (91%), Gaps = 0/225 (0%)
Query 7 EHDPSYGIPDIAEPAELDADELKRVLEALLLVIDTPVTADALAAATEQPVYRVAAKLQLM 66
+ D GIPDIAE A ++++EL VLEALLLV+DTPVTA+ALA+AT+QPVYR+A KLQ M
Sbjct 18 DSDLDVGIPDIAEAAPMESEELGSVLEALLLVVDTPVTAEALASATQQPVYRIATKLQEM 77
Query 67 ADELTGRDSGIDLRHTSEGWRMYTRARFAPYVEKLLLDGARTKLTRAALETLAVVAYRQP 126
A++LT RDSGIDLR SEGWRMYTRARFAPYVEKLLLDGAR+KLTRAALETLAVVAYRQP
Sbjct 78 AEDLTARDSGIDLRKNSEGWRMYTRARFAPYVEKLLLDGARSKLTRAALETLAVVAYRQP 137
Query 127 VTRARVSAVRGVNVDAVMRTLLARGLITEVGTDADTGAVTFATTELFLERLGLTSLSELP 186
VTRARVSAVRGVNVDAVMRTLLARGLITE G D D+GA TFATTELFLERLGLTSL++LP
Sbjct 138 VTRARVSAVRGVNVDAVMRTLLARGLITEAGVDDDSGATTFATTELFLERLGLTSLADLP 197
Query 187 DIAPLLPDVDTIDDLSESLDSEPRFIKLTGELASEQTLSFDVDRD 231
DIAPLLPDVDTI+DLSESLDSEPRFIKL+G A++ L+FDVD+D
Sbjct 198 DIAPLLPDVDTIEDLSESLDSEPRFIKLSGGQAADPALTFDVDQD 242
>gi|15827714|ref|NP_301977.1| hypothetical protein ML1369 [Mycobacterium leprae TN]
gi|221230191|ref|YP_002503607.1| hypothetical protein MLBr_01369 [Mycobacterium leprae Br4923]
gi|2065215|emb|CAB08280.1| hypothetical protein MLC1351.04c [Mycobacterium leprae]
gi|13093265|emb|CAC31750.1| conserved hypothetical protein [Mycobacterium leprae]
gi|219933298|emb|CAR71464.1| conserved hypothetical protein [Mycobacterium leprae Br4923]
Length=231
Score = 356 bits (913), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 180/231 (78%), Positives = 206/231 (90%), Gaps = 0/231 (0%)
Query 1 VTEHMPEHDPSYGIPDIAEPAELDADELKRVLEALLLVIDTPVTADALAAATEQPVYRVA 60
+T+ MP+ + GIP+IAE ++LDADEL VLEALLLV+DTPVT +ALAAA EQPV R+A
Sbjct 1 MTQEMPDLELDSGIPNIAEASKLDADELGCVLEALLLVVDTPVTVEALAAAAEQPVDRIA 60
Query 61 AKLQLMADELTGRDSGIDLRHTSEGWRMYTRARFAPYVEKLLLDGARTKLTRAALETLAV 120
AKL+LM +E RDSGIDLRH++EGWR+YTRAR+APYVE+LLLDGARTKLTRAALETLAV
Sbjct 61 AKLRLMVNEFAERDSGIDLRHSAEGWRLYTRARYAPYVERLLLDGARTKLTRAALETLAV 120
Query 121 VAYRQPVTRARVSAVRGVNVDAVMRTLLARGLITEVGTDADTGAVTFATTELFLERLGLT 180
VAYRQPVTRARVSAVRGVNVDAVMRTLLARGLITEVG + D+GAV FATTELFLERLGLT
Sbjct 121 VAYRQPVTRARVSAVRGVNVDAVMRTLLARGLITEVGPEPDSGAVMFATTELFLERLGLT 180
Query 181 SLSELPDIAPLLPDVDTIDDLSESLDSEPRFIKLTGELASEQTLSFDVDRD 231
SL+ELPDIAPLLPDVDTI+D+SE LD +PRFIKLTG S+Q SFDV++D
Sbjct 181 SLAELPDIAPLLPDVDTIEDMSEFLDKKPRFIKLTGAKVSKQPRSFDVNQD 231
>gi|467154|gb|AAA50918.1| unknown [Mycobacterium leprae]
Length=258
Score = 356 bits (913), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 180/231 (78%), Positives = 206/231 (90%), Gaps = 0/231 (0%)
Query 1 VTEHMPEHDPSYGIPDIAEPAELDADELKRVLEALLLVIDTPVTADALAAATEQPVYRVA 60
+T+ MP+ + GIP+IAE ++LDADEL VLEALLLV+DTPVT +ALAAA EQPV R+A
Sbjct 28 LTQEMPDLELDSGIPNIAEASKLDADELGCVLEALLLVVDTPVTVEALAAAAEQPVDRIA 87
Query 61 AKLQLMADELTGRDSGIDLRHTSEGWRMYTRARFAPYVEKLLLDGARTKLTRAALETLAV 120
AKL+LM +E RDSGIDLRH++EGWR+YTRAR+APYVE+LLLDGARTKLTRAALETLAV
Sbjct 88 AKLRLMVNEFAERDSGIDLRHSAEGWRLYTRARYAPYVERLLLDGARTKLTRAALETLAV 147
Query 121 VAYRQPVTRARVSAVRGVNVDAVMRTLLARGLITEVGTDADTGAVTFATTELFLERLGLT 180
VAYRQPVTRARVSAVRGVNVDAVMRTLLARGLITEVG + D+GAV FATTELFLERLGLT
Sbjct 148 VAYRQPVTRARVSAVRGVNVDAVMRTLLARGLITEVGPEPDSGAVMFATTELFLERLGLT 207
Query 181 SLSELPDIAPLLPDVDTIDDLSESLDSEPRFIKLTGELASEQTLSFDVDRD 231
SL+ELPDIAPLLPDVDTI+D+SE LD +PRFIKLTG S+Q SFDV++D
Sbjct 208 SLAELPDIAPLLPDVDTIEDMSEFLDKKPRFIKLTGAKVSKQPRSFDVNQD 258
>gi|118618583|ref|YP_906915.1| transcriptional regulator [Mycobacterium ulcerans Agy99]
gi|183982540|ref|YP_001850831.1| transcriptional regulator [Mycobacterium marinum M]
gi|118570693|gb|ABL05444.1| transcriptional regulator [Mycobacterium ulcerans Agy99]
gi|183175866|gb|ACC40976.1| transcriptional regulator [Mycobacterium marinum M]
Length=235
Score = 348 bits (893), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 186/235 (80%), Positives = 210/235 (90%), Gaps = 4/235 (1%)
Query 1 VTEHMPE----HDPSYGIPDIAEPAELDADELKRVLEALLLVIDTPVTADALAAATEQPV 56
+TE +P+ + S GIPDIAEPAE++ +EL VLEALLLVIDTPVTA+ LA +QPV
Sbjct 1 MTEQVPDPELGSELSSGIPDIAEPAEMEPEELGSVLEALLLVIDTPVTAETLATVIDQPV 60
Query 57 YRVAAKLQLMADELTGRDSGIDLRHTSEGWRMYTRARFAPYVEKLLLDGARTKLTRAALE 116
YRVAAKL+LMADEL RDSGIDLRH SEGWR+YTR+RFAPYVEKLLLDGARTKLTRAALE
Sbjct 61 YRVAAKLRLMADELIERDSGIDLRHNSEGWRLYTRSRFAPYVEKLLLDGARTKLTRAALE 120
Query 117 TLAVVAYRQPVTRARVSAVRGVNVDAVMRTLLARGLITEVGTDADTGAVTFATTELFLER 176
TLAVVAYRQPVTRARVSAVRGVNVDAVMRTLLARGLITEVG D D+GAVTFATTELFLER
Sbjct 121 TLAVVAYRQPVTRARVSAVRGVNVDAVMRTLLARGLITEVGNDEDSGAVTFATTELFLER 180
Query 177 LGLTSLSELPDIAPLLPDVDTIDDLSESLDSEPRFIKLTGELASEQTLSFDVDRD 231
LGLTSL+ELPDIAPLLPD+D+I+DLS SLD++PRF+KL G S+Q+++FDVDRD
Sbjct 181 LGLTSLTELPDIAPLLPDIDSIEDLSASLDTDPRFMKLAGSQPSDQSVTFDVDRD 235
>gi|333990502|ref|YP_004523116.1| transcriptional regulator [Mycobacterium sp. JDM601]
gi|333486470|gb|AEF35862.1| transcriptional regulator [Mycobacterium sp. JDM601]
Length=254
Score = 332 bits (852), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 178/253 (71%), Positives = 199/253 (79%), Gaps = 23/253 (9%)
Query 1 VTEHMPEHDPSYGIP-----------------------DIAEPAELDADELKRVLEALLL 37
+T+HMPE + S G D+A EL+ EL VLEALLL
Sbjct 1 MTDHMPEPEVSDGAAAAETVDDTGQLEASGGSGSDLGIDVAVAPELEDAELGAVLEALLL 60
Query 38 VIDTPVTADALAAATEQPVYRVAAKLQLMADELTGRDSGIDLRHTSEGWRMYTRARFAPY 97
V+DTP T ++LAAAT+QPVYR+ AKL+ MADEL RDSG+DLR GWR YTRARFAPY
Sbjct 61 VVDTPATVESLAAATDQPVYRITAKLRAMADELADRDSGMDLREAGGGWRFYTRARFAPY 120
Query 98 VEKLLLDGARTKLTRAALETLAVVAYRQPVTRARVSAVRGVNVDAVMRTLLARGLITEVG 157
VE+LLLDGAR+KLTRAALETLAVVAYRQPVTRARVSAVRGVNVDAVMRTLLARGLITE G
Sbjct 121 VERLLLDGARSKLTRAALETLAVVAYRQPVTRARVSAVRGVNVDAVMRTLLARGLITEAG 180
Query 158 TDADTGAVTFATTELFLERLGLTSLSELPDIAPLLPDVDTIDDLSESLDSEPRFIKLTGE 217
DADTGAVTFATTELFLERLGL+SL++LPDIAPLLPDVD IDDLSESLDSEPRF+KL G
Sbjct 181 ADADTGAVTFATTELFLERLGLSSLADLPDIAPLLPDVDVIDDLSESLDSEPRFMKLGGA 240
Query 218 LASEQTLSFDVDR 230
A++Q L+FDVD
Sbjct 241 PAADQPLTFDVDH 253
>gi|118471424|ref|YP_888040.1| transcriptional regulator [Mycobacterium smegmatis str. MC2 155]
gi|118172711|gb|ABK73607.1| transcriptional regulator [Mycobacterium smegmatis str. MC2 155]
Length=276
Score = 323 bits (827), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 168/217 (78%), Positives = 185/217 (86%), Gaps = 1/217 (0%)
Query 16 DIAEPAELDADELKRVLEALLLVIDTPVTADALAAATEQPVYRVAAKLQLMADELTGRDS 75
D+ +LD DEL VLEALLLV+DTPVT DALA+ATEQP YR+AAKL MA +L RDS
Sbjct 60 DLMSAPDLDDDELGAVLEALLLVVDTPVTIDALASATEQPGYRIAAKLAAMAQDLAERDS 119
Query 76 GIDLRHTSEGWRMYTRARFAPYVEKLLLDGARTKLTRAALETLAVVAYRQPVTRARVSAV 135
GIDLR GWRMYTRA++APYVE+LLLDGARTKLTRAALETLAVVAYRQPVTRARVSAV
Sbjct 120 GIDLREAGGGWRMYTRAKYAPYVERLLLDGARTKLTRAALETLAVVAYRQPVTRARVSAV 179
Query 136 RGVNVDAVMRTLLARGLITEVGTDADTGAVTFATTELFLERLGLTSLSELPDIAPLLPDV 195
RGVNVDAVMRTLLARGLITE GTD DTGA TFATT+LFLERLGLTSL +LPDIAPLLPDV
Sbjct 180 RGVNVDAVMRTLLARGLITEAGTDPDTGATTFATTDLFLERLGLTSLEDLPDIAPLLPDV 239
Query 196 DTIDDLSESLDSEPRFIKLTGELAS-EQTLSFDVDRD 231
D IDDLSE+L EPRF KL G ++ +Q +FDVD+D
Sbjct 240 DVIDDLSENLGDEPRFAKLNGNSSNGDQPAAFDVDKD 276
>gi|145224080|ref|YP_001134758.1| putative transcriptional regulator [Mycobacterium gilvum PYR-GCK]
gi|315444417|ref|YP_004077296.1| condensin subunit ScpB [Mycobacterium sp. Spyr1]
gi|145216566|gb|ABP45970.1| condensin subunit ScpB [Mycobacterium gilvum PYR-GCK]
gi|315262720|gb|ADT99461.1| condensin subunit ScpB [Mycobacterium sp. Spyr1]
Length=243
Score = 317 bits (812), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 165/216 (77%), Positives = 182/216 (85%), Gaps = 0/216 (0%)
Query 16 DIAEPAELDADELKRVLEALLLVIDTPVTADALAAATEQPVYRVAAKLQLMADELTGRDS 75
D A ELD EL VLEALLLV+DTPVT D LA T+ P RVAA+LQ++AD RDS
Sbjct 28 DDAPAVELDDTELDSVLEALLLVVDTPVTVDTLAGVTDAPSARVAARLQVLADGYAARDS 87
Query 76 GIDLRHTSEGWRMYTRARFAPYVEKLLLDGARTKLTRAALETLAVVAYRQPVTRARVSAV 135
GIDLR + GWRMYTR+R+APYVEKLLLDGAR+KLTRAALETLAVVAYRQPVTRARVSAV
Sbjct 88 GIDLREAAGGWRMYTRSRYAPYVEKLLLDGARSKLTRAALETLAVVAYRQPVTRARVSAV 147
Query 136 RGVNVDAVMRTLLARGLITEVGTDADTGAVTFATTELFLERLGLTSLSELPDIAPLLPDV 195
RGVNVDAVMRTL+ARGLITE GTDAD+GAVTFATTELFLERLGLTSL++LPDIAPLLPDV
Sbjct 148 RGVNVDAVMRTLMARGLITEAGTDADSGAVTFATTELFLERLGLTSLTDLPDIAPLLPDV 207
Query 196 DTIDDLSESLDSEPRFIKLTGELASEQTLSFDVDRD 231
D IDDLSE+L EPRF+KL G A E + DVD+D
Sbjct 208 DVIDDLSETLSDEPRFMKLNGASAPEAPAAIDVDQD 243
>gi|126435524|ref|YP_001071215.1| condensin subunit ScpB [Mycobacterium sp. JLS]
gi|126235324|gb|ABN98724.1| condensin subunit ScpB [Mycobacterium sp. JLS]
Length=231
Score = 314 bits (805), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 167/224 (75%), Positives = 187/224 (84%), Gaps = 2/224 (0%)
Query 9 DPSYGIPDIAEPAELDADELKRVLEALLLVIDTPVTADALAAATEQPVYRVAAKLQLMAD 68
D + GI D+A ELD EL+ VLEALLLV+DTP T D LA T+QP YR+A L MA
Sbjct 7 DGNLGI-DVATTPELDDSELRNVLEALLLVVDTPATVDQLAEVTDQPGYRIATMLTEMAA 65
Query 69 ELTGRDSGIDLRHTSEGWRMYTRARFAPYVEKLLLDGARTKLTRAALETLAVVAYRQPVT 128
+L RDSGIDLR GWRMYTR+R+APYVE+LLLDGAR+KLTRAALETLAVVAYRQPVT
Sbjct 66 DLAARDSGIDLREAGGGWRMYTRSRYAPYVERLLLDGARSKLTRAALETLAVVAYRQPVT 125
Query 129 RARVSAVRGVNVDAVMRTLLARGLITEVGTDADTGAVTFATTELFLERLGLTSLSELPDI 188
RARVSAVRGVNVDAVMRTLLARGLITE GTD D+GAVTFATTELFLERLGL+SL++LPDI
Sbjct 126 RARVSAVRGVNVDAVMRTLLARGLITEAGTDPDSGAVTFATTELFLERLGLSSLADLPDI 185
Query 189 APLLPDVDTIDDLSESLDSEPRFIKLTGELA-SEQTLSFDVDRD 231
APLLPDVD IDDLSESL EPRF+KL G A + Q +S+DVD+D
Sbjct 186 APLLPDVDVIDDLSESLADEPRFMKLGGVPAPTGQPMSYDVDKD 229
>gi|108799896|ref|YP_640093.1| condensin subunit ScpB [Mycobacterium sp. MCS]
gi|119869006|ref|YP_938958.1| condensin subunit ScpB [Mycobacterium sp. KMS]
gi|108770315|gb|ABG09037.1| condensin subunit ScpB [Mycobacterium sp. MCS]
gi|119695095|gb|ABL92168.1| condensin subunit ScpB [Mycobacterium sp. KMS]
Length=231
Score = 312 bits (800), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 166/224 (75%), Positives = 186/224 (84%), Gaps = 2/224 (0%)
Query 9 DPSYGIPDIAEPAELDADELKRVLEALLLVIDTPVTADALAAATEQPVYRVAAKLQLMAD 68
D + GI D+A ELD EL+ VLEALLLV+DTP T D LA T+QP YR+A L MA
Sbjct 7 DGNLGI-DVATAPELDDSELRNVLEALLLVVDTPATVDQLAEVTDQPGYRIATMLTEMAA 65
Query 69 ELTGRDSGIDLRHTSEGWRMYTRARFAPYVEKLLLDGARTKLTRAALETLAVVAYRQPVT 128
+L RDSGIDLR GWRMYTR+R+APYVE+LLLDGAR+KLTRAALETLAVVAYRQPVT
Sbjct 66 DLAARDSGIDLREAGGGWRMYTRSRYAPYVERLLLDGARSKLTRAALETLAVVAYRQPVT 125
Query 129 RARVSAVRGVNVDAVMRTLLARGLITEVGTDADTGAVTFATTELFLERLGLTSLSELPDI 188
RARVSAVRGVNVDAVMRTLLARGLITE GTD D+GAVTFATT LFLERLGL+SL++LPDI
Sbjct 126 RARVSAVRGVNVDAVMRTLLARGLITEAGTDPDSGAVTFATTGLFLERLGLSSLADLPDI 185
Query 189 APLLPDVDTIDDLSESLDSEPRFIKLTGELA-SEQTLSFDVDRD 231
APLLPDVD IDDLSESL EPRF+KL G A + Q +S+DVD+D
Sbjct 186 APLLPDVDVIDDLSESLADEPRFMKLGGVPAPTGQPMSYDVDKD 229
>gi|120404252|ref|YP_954081.1| putative transcriptional regulator [Mycobacterium vanbaalenii
PYR-1]
gi|119957070|gb|ABM14075.1| condensin subunit ScpB [Mycobacterium vanbaalenii PYR-1]
Length=241
Score = 296 bits (757), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 158/210 (76%), Positives = 179/210 (86%), Gaps = 1/210 (0%)
Query 23 LDADELKRVLEALLLVIDTPVTADALAAATEQPVYRVAAKLQLMADELTGRDSGIDLRHT 82
L+ EL LEALLLV+DTPVT DALAAAT+QP RVA +L L+A L RDSGIDLR
Sbjct 32 LEDGELDSALEALLLVVDTPVTVDALAAATDQPPARVAERLHLLAAGLAARDSGIDLREA 91
Query 83 SEGWRMYTRARFAPYVEKLLLDGARTKLTRAALETLAVVAYRQPVTRARVSAVRGVNVDA 142
+ GWRMYTR+++AP+VEKLLLDGAR+KLTRAALETLAV+AYRQPVTRARVSAVRGVNVDA
Sbjct 92 AGGWRMYTRSKYAPFVEKLLLDGARSKLTRAALETLAVIAYRQPVTRARVSAVRGVNVDA 151
Query 143 VMRTLLARGLITEVGTDADTGAVTFATTELFLERLGLTSLSELPDIAPLLPDVDTIDDLS 202
V+RTLLARGLITE GTD+D+GAVTF+TTELFLERLGLTSL++LPDIAPLLP+VD IDDLS
Sbjct 152 VIRTLLARGLITEAGTDSDSGAVTFSTTELFLERLGLTSLTDLPDIAPLLPNVDVIDDLS 211
Query 203 ESLDSEPRFIKLTGELA-SEQTLSFDVDRD 231
E+L EPRF+KL G SFDVDRD
Sbjct 212 ETLSEEPRFMKLNGTSGPGAAPASFDVDRD 241
>gi|289745852|ref|ZP_06505230.1| segregation and condensation protein B [Mycobacterium tuberculosis
02_1987]
gi|289686380|gb|EFD53868.1| segregation and condensation protein B [Mycobacterium tuberculosis
02_1987]
Length=197
Score = 283 bits (724), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 142/143 (99%), Positives = 143/143 (100%), Gaps = 0/143 (0%)
Query 1 VTEHMPEHDPSYGIPDIAEPAELDADELKRVLEALLLVIDTPVTADALAAATEQPVYRVA 60
+TEHMPEHDPSYGIPDIAEPAELDADELKRVLEALLLVIDTPVTADALAAATEQPVYRVA
Sbjct 1 MTEHMPEHDPSYGIPDIAEPAELDADELKRVLEALLLVIDTPVTADALAAATEQPVYRVA 60
Query 61 AKLQLMADELTGRDSGIDLRHTSEGWRMYTRARFAPYVEKLLLDGARTKLTRAALETLAV 120
AKLQLMADELTGRDSGIDLRHTSEGWRMYTRARFAPYVEKLLLDGARTKLTRAALETLAV
Sbjct 61 AKLQLMADELTGRDSGIDLRHTSEGWRMYTRARFAPYVEKLLLDGARTKLTRAALETLAV 120
Query 121 VAYRQPVTRARVSAVRGVNVDAV 143
VAYRQPVTRARVSAVRGVNVDAV
Sbjct 121 VAYRQPVTRARVSAVRGVNVDAV 143
>gi|169629455|ref|YP_001703104.1| putative segregation and condensation protein B [Mycobacterium
abscessus ATCC 19977]
gi|169241422|emb|CAM62450.1| Hypothetical segregation and condensation protein B [Mycobacterium
abscessus]
Length=253
Score = 274 bits (700), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 148/210 (71%), Positives = 171/210 (82%), Gaps = 4/210 (1%)
Query 26 DELKRVLEALLLVIDTPVTADALAAATEQPVYRVAAKLQLMADELTGRDSGIDLRHTSEG 85
DEL LEALLLV+DTP++A A+A+ QP+ RVA LQ +++ LT R SGIDLR T++G
Sbjct 44 DELISTLEALLLVVDTPISAAAVASVVAQPLDRVAEALQRISEILTDRSSGIDLRETADG 103
Query 86 WRMYTRARFAPYVEKLLLDGARTKLTRAALETLAVVAYRQPVTRARVSAVRGVNVDAVMR 145
WRMYTRA++APYVEKLLLDGAR+KLTRAALETLAVVAYRQPVTR+RVSAVRGVNVDAVMR
Sbjct 104 WRMYTRAQYAPYVEKLLLDGARSKLTRAALETLAVVAYRQPVTRSRVSAVRGVNVDAVMR 163
Query 146 TLLARGLITEVGTDADTGAVTFATTELFLERLGLTSLSELPDIAPLLPDVDTIDDLSESL 205
TLL RGLI E GTD ++GAV F TTELFLERLGLTSLS+LPDIAPLLPD+D IDDLSE+L
Sbjct 164 TLLMRGLIAEAGTDDESGAVMFRTTELFLERLGLTSLSDLPDIAPLLPDIDVIDDLSENL 223
Query 206 DSEPRFIKLT----GELASEQTLSFDVDRD 231
EPRF +L S +F VD+D
Sbjct 224 GDEPRFARLNRTADSGAGSGDAPAFTVDQD 253
>gi|289554517|ref|ZP_06443727.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
605]
gi|289439149|gb|EFD21642.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
605]
Length=159
Score = 272 bits (696), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 141/141 (100%), Positives = 141/141 (100%), Gaps = 0/141 (0%)
Query 91 RARFAPYVEKLLLDGARTKLTRAALETLAVVAYRQPVTRARVSAVRGVNVDAVMRTLLAR 150
RARFAPYVEKLLLDGARTKLTRAALETLAVVAYRQPVTRARVSAVRGVNVDAVMRTLLAR
Sbjct 19 RARFAPYVEKLLLDGARTKLTRAALETLAVVAYRQPVTRARVSAVRGVNVDAVMRTLLAR 78
Query 151 GLITEVGTDADTGAVTFATTELFLERLGLTSLSELPDIAPLLPDVDTIDDLSESLDSEPR 210
GLITEVGTDADTGAVTFATTELFLERLGLTSLSELPDIAPLLPDVDTIDDLSESLDSEPR
Sbjct 79 GLITEVGTDADTGAVTFATTELFLERLGLTSLSELPDIAPLLPDVDTIDDLSESLDSEPR 138
Query 211 FIKLTGELASEQTLSFDVDRD 231
FIKLTGELASEQTLSFDVDRD
Sbjct 139 FIKLTGELASEQTLSFDVDRD 159
>gi|229494823|ref|ZP_04388577.1| segregation and condensation protein B [Rhodococcus erythropolis
SK121]
gi|229318261|gb|EEN84128.1| segregation and condensation protein B [Rhodococcus erythropolis
SK121]
Length=242
Score = 264 bits (675), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 140/214 (66%), Positives = 165/214 (78%), Gaps = 6/214 (2%)
Query 2 TEHMPEHDPSYGIPDIAEPAELDADELKRVLEALLLVIDTPVTADALAAATEQPVYRVAA 61
TEH E + S PD ELD D+L VLE+LLLV+D+P + LA+ T RV
Sbjct 20 TEHASESEVS--APDF----ELDDDQLDAVLESLLLVVDSPAEVNQLASVTGTAPERVEE 73
Query 62 KLQLMADELTGRDSGIDLRHTSEGWRMYTRARFAPYVEKLLLDGARTKLTRAALETLAVV 121
+L M+ LT R SG+DLR+ +GWR+YTR FAPYVEKLLLDGARTKLTRAALETLAVV
Sbjct 74 RLTSMSAALTARGSGMDLRYAGDGWRLYTRQEFAPYVEKLLLDGARTKLTRAALETLAVV 133
Query 122 AYRQPVTRARVSAVRGVNVDAVMRTLLARGLITEVGTDADTGAVTFATTELFLERLGLTS 181
AYRQP+TRAR+SAVRGVNVD V+RTLLARGLI E G D DT A ++TTELFLERLGL S
Sbjct 134 AYRQPLTRARISAVRGVNVDGVVRTLLARGLIAEAGPDPDTNATRYSTTELFLERLGLAS 193
Query 182 LSELPDIAPLLPDVDTIDDLSESLDSEPRFIKLT 215
LSELP++APLLPDVD IDD+SESL+S+PRF ++
Sbjct 194 LSELPELAPLLPDVDLIDDISESLESDPRFARMN 227
>gi|343928408|ref|ZP_08767856.1| chromosome segregation and condensation protein ScpB [Gordonia
alkanivorans NBRC 16433]
gi|343761593|dbj|GAA14782.1| chromosome segregation and condensation protein ScpB [Gordonia
alkanivorans NBRC 16433]
Length=234
Score = 261 bits (668), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 139/214 (65%), Positives = 164/214 (77%), Gaps = 1/214 (0%)
Query 17 IAEPAE-LDADELKRVLEALLLVIDTPVTADALAAATEQPVYRVAAKLQLMADELTGRDS 75
+A+ AE LD + L+ LEA+LLV+DTPVT + LA A +Q RV L M+ E T S
Sbjct 17 VADEAEVLDDETLRSALEAVLLVVDTPVTTEELANAVDQDRTRVREMLNAMSSEFTAARS 76
Query 76 GIDLRHTSEGWRMYTRARFAPYVEKLLLDGARTKLTRAALETLAVVAYRQPVTRARVSAV 135
G DLR +GWR YTRA +APYVE+LLLDGAR+KLTRAALETLAV+AYRQPVTRARVSA+
Sbjct 77 GFDLRFAGDGWRFYTRADYAPYVERLLLDGARSKLTRAALETLAVIAYRQPVTRARVSAI 136
Query 136 RGVNVDAVMRTLLARGLITEVGTDADTGAVTFATTELFLERLGLTSLSELPDIAPLLPDV 195
RGVNVD V+RTL+ARGLI EVG D T A T+ATTE+FLERLGL SLSELPD+APLLPDV
Sbjct 137 RGVNVDGVIRTLVARGLINEVGQDPQTNATTYATTEMFLERLGLASLSELPDLAPLLPDV 196
Query 196 DTIDDLSESLDSEPRFIKLTGELASEQTLSFDVD 229
D IDDL E L S+PRF KL+ + + + L D D
Sbjct 197 DLIDDLDEELLSDPRFAKLSPQPSDSKVLVTDGD 230
>gi|226360074|ref|YP_002777852.1| chromosome segregation and condensation protein ScpB [Rhodococcus
opacus B4]
gi|226238559|dbj|BAH48907.1| chromosome segregation and condensation protein ScpB [Rhodococcus
opacus B4]
Length=230
Score = 260 bits (664), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 134/211 (64%), Positives = 165/211 (79%), Gaps = 1/211 (0%)
Query 19 EPAELDADELKRVLEALLLVIDTPVTADALAAATEQPVYRVAAKLQLMADELTGRDSGID 78
EP EL EL VLE+LLL++D+P A+ LA+AT V R+ L M+ ELT R SG+D
Sbjct 18 EP-ELSDTELAAVLESLLLIVDSPAGAEQLASATGASVNRITETLNRMSAELTARGSGMD 76
Query 79 LRHTSEGWRMYTRARFAPYVEKLLLDGARTKLTRAALETLAVVAYRQPVTRARVSAVRGV 138
LR+ +GWR+YTR +APYVE+LLLDGAR+KLTRAALETLAVVAYRQP+TRAR+SAVRGV
Sbjct 77 LRYAGDGWRLYTRTAYAPYVERLLLDGARSKLTRAALETLAVVAYRQPLTRARISAVRGV 136
Query 139 NVDAVMRTLLARGLITEVGTDADTGAVTFATTELFLERLGLTSLSELPDIAPLLPDVDTI 198
NVD V+RTLLARGLI E G D DT A ++TTELFLERLGL SL++LP +APLLPDVD I
Sbjct 137 NVDGVVRTLLARGLIAEAGVDPDTNATQYSTTELFLERLGLASLADLPALAPLLPDVDLI 196
Query 199 DDLSESLDSEPRFIKLTGELASEQTLSFDVD 229
DD+S+SL+S+PRF ++ AS + L +D
Sbjct 197 DDISDSLESDPRFARMNKATASTEELDTGLD 227
>gi|111017943|ref|YP_700915.1| hypothetical protein RHA1_ro00926 [Rhodococcus jostii RHA1]
gi|110817473|gb|ABG92757.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=230
Score = 259 bits (662), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 134/212 (64%), Positives = 166/212 (79%), Gaps = 1/212 (0%)
Query 18 AEPAELDADELKRVLEALLLVIDTPVTADALAAATEQPVYRVAAKLQLMADELTGRDSGI 77
EP EL EL+ VLE+LLL++D+P A+ LA+AT V R+ L M+ ELT R SG+
Sbjct 17 GEP-ELSDTELEAVLESLLLIVDSPAGAEQLASATGASVNRITDVLNRMSAELTARGSGM 75
Query 78 DLRHTSEGWRMYTRARFAPYVEKLLLDGARTKLTRAALETLAVVAYRQPVTRARVSAVRG 137
DLR+ +GWR+YTR +APYVE+LLLDGAR+KLTRAALETLAVVAYRQP+TRAR+SAVRG
Sbjct 76 DLRYAGDGWRLYTRTAYAPYVERLLLDGARSKLTRAALETLAVVAYRQPLTRARISAVRG 135
Query 138 VNVDAVMRTLLARGLITEVGTDADTGAVTFATTELFLERLGLTSLSELPDIAPLLPDVDT 197
VNVD V+RTLLARGLI E G D DT A ++TTELFLERLGL SL++LP +APLLPDVD
Sbjct 136 VNVDGVVRTLLARGLIAEAGVDPDTNATQYSTTELFLERLGLASLADLPALAPLLPDVDL 195
Query 198 IDDLSESLDSEPRFIKLTGELASEQTLSFDVD 229
IDD+S+SL+S+PRF ++ AS + L +D
Sbjct 196 IDDISDSLESDPRFARMNKATASTEELDTGLD 227
>gi|226306744|ref|YP_002766704.1| chromosome segregation and condensation protein ScpB [Rhodococcus
erythropolis PR4]
gi|226185861|dbj|BAH33965.1| putative chromosome segregation and condensation protein ScpB
[Rhodococcus erythropolis PR4]
Length=242
Score = 255 bits (651), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 128/185 (70%), Positives = 151/185 (82%), Gaps = 0/185 (0%)
Query 31 VLEALLLVIDTPVTADALAAATEQPVYRVAAKLQLMADELTGRDSGIDLRHTSEGWRMYT 90
VLE+LLLV+D+P + LA+ T RV +L M+ LT R SG+DLR+ +GWR+YT
Sbjct 43 VLESLLLVVDSPAEVNQLASVTGTAPERVEERLTSMSAALTARGSGMDLRYAGDGWRLYT 102
Query 91 RARFAPYVEKLLLDGARTKLTRAALETLAVVAYRQPVTRARVSAVRGVNVDAVMRTLLAR 150
R FAPYVEKLLLDGARTKLTRAALETLAVVAYRQP+TRAR+SAVRGVNVD V+RTLLAR
Sbjct 103 RQEFAPYVEKLLLDGARTKLTRAALETLAVVAYRQPLTRARISAVRGVNVDGVVRTLLAR 162
Query 151 GLITEVGTDADTGAVTFATTELFLERLGLTSLSELPDIAPLLPDVDTIDDLSESLDSEPR 210
GLI E G D DT A ++TTELFLERLGL SLSELP++APLLPDVD IDD+SESL+S+PR
Sbjct 163 GLIAEAGPDPDTNATRYSTTELFLERLGLASLSELPELAPLLPDVDLIDDISESLESDPR 222
Query 211 FIKLT 215
F ++
Sbjct 223 FARMN 227
>gi|326384758|ref|ZP_08206435.1| segregation and condensation protein B [Gordonia neofelifaecis
NRRL B-59395]
gi|326196566|gb|EGD53763.1| segregation and condensation protein B [Gordonia neofelifaecis
NRRL B-59395]
Length=231
Score = 251 bits (640), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 135/208 (65%), Positives = 155/208 (75%), Gaps = 0/208 (0%)
Query 15 PDIAEPAELDADELKRVLEALLLVIDTPVTADALAAATEQPVYRVAAKLQLMADELTGRD 74
P++ E L+ DEL+ LEA+LLV+DTP T + LA A Q RV L+ M+ +LT
Sbjct 10 PEVDEGEHLEDDELRAALEAVLLVVDTPATVEELAQAVGQERRRVRQMLRRMSADLTEAG 69
Query 75 SGIDLRHTSEGWRMYTRARFAPYVEKLLLDGARTKLTRAALETLAVVAYRQPVTRARVSA 134
SGIDLR +GWR YTRA +APYVEKLLLDG R+KLTRAALETLAVVAYRQPVTRARVSA
Sbjct 70 SGIDLRFAGDGWRFYTRADYAPYVEKLLLDGTRSKLTRAALETLAVVAYRQPVTRARVSA 129
Query 135 VRGVNVDAVMRTLLARGLITEVGTDADTGAVTFATTELFLERLGLTSLSELPDIAPLLPD 194
+RGVNVD V+RTLLARGLI++ GTD T + TTELFLERLGL SLS+LPDIAPLLP
Sbjct 130 IRGVNVDGVVRTLLARGLISDAGTDESTNGTLYVTTELFLERLGLASLSDLPDIAPLLPG 189
Query 195 VDTIDDLSESLDSEPRFIKLTGELASEQ 222
VD IDDL E L +PRF KL G A
Sbjct 190 VDVIDDLGEELLDDPRFAKLGGSQAQSN 217
>gi|296140074|ref|YP_003647317.1| chromosome segregation and condensation protein ScpB [Tsukamurella
paurometabola DSM 20162]
gi|296028208|gb|ADG78978.1| chromosome segregation and condensation protein, ScpB [Tsukamurella
paurometabola DSM 20162]
Length=237
Score = 243 bits (621), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 137/207 (67%), Positives = 168/207 (82%), Gaps = 4/207 (1%)
Query 23 LDADELKRVLEALLLVIDTPVTADALAAATEQPVYRVAAKLQLMADELTGRDSGIDLRHT 82
++ DEL+ LEALLLVID P +A++L AA E+P R+ A+L+ A ELT R SG++LR +
Sbjct 34 MENDELRCALEALLLVIDAPASAESLGAALEEPEERITAELRTWAAELTDRRSGMELRES 93
Query 83 SEGWRMYTRARFAPYVEKLLLDGARTKLTRAALETLAVVAYRQPVTRARVSAVRGVNVDA 142
+EGWR+Y+RA +APYVE+LLLDG R+KLTRAALETLAV+AYRQPV+R++VSAVRGVNVD
Sbjct 94 AEGWRLYSRAEYAPYVERLLLDGVRSKLTRAALETLAVIAYRQPVSRSQVSAVRGVNVDG 153
Query 143 VMRTLLARGLITEVGTDADTGAVTFATTELFLERLGLTSLSELPDIAPLLPDVDTIDDLS 202
VMRTL ARGLI EVG+DA GA T+ATTELFLERLGLTSL ELP +APLLP+VD I+DLS
Sbjct 154 VMRTLAARGLIAEVGSDA--GATTYATTELFLERLGLTSLDELPPLAPLLPEVDVIEDLS 211
Query 203 ESLDSEPRFIKLTGELASEQTLSFDVD 229
+LD EPRF KL + S + FD D
Sbjct 212 STLDDEPRFAKLGRK--STDVIGFDPD 236
>gi|257056523|ref|YP_003134355.1| condensin subunit ScpB [Saccharomonospora viridis DSM 43017]
gi|256586395|gb|ACU97528.1| condensin subunit ScpB [Saccharomonospora viridis DSM 43017]
Length=252
Score = 238 bits (606), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 118/173 (69%), Positives = 142/173 (83%), Gaps = 0/173 (0%)
Query 28 LKRVLEALLLVIDTPVTADALAAATEQPVYRVAAKLQLMADELTGRDSGIDLRHTSEGWR 87
L+ LEALLLV+D P + ++LA A EQPV RV L+ MA++L R SG+DLR EGWR
Sbjct 79 LQSALEALLLVVDAPASEESLAGALEQPVDRVTEMLRTMAEDLNDRGSGMDLRRVGEGWR 138
Query 88 MYTRARFAPYVEKLLLDGARTKLTRAALETLAVVAYRQPVTRARVSAVRGVNVDAVMRTL 147
+YTR +AP+VEKLLLDG R+KLTRAALETLAV+AYRQPVTR+R++AVRGVNVD V+RTL
Sbjct 139 LYTRDTYAPFVEKLLLDGQRSKLTRAALETLAVIAYRQPVTRSRIAAVRGVNVDGVVRTL 198
Query 148 LARGLITEVGTDADTGAVTFATTELFLERLGLTSLSELPDIAPLLPDVDTIDD 200
LARGLI E GTD +TG + TTELFLERLGL+SL +LP IAPLLP+VD+IDD
Sbjct 199 LARGLIEENGTDPETGGTLYVTTELFLERLGLSSLDDLPPIAPLLPEVDSIDD 251
>gi|256379431|ref|YP_003103091.1| chromosome segregation and condensation protein ScpB [Actinosynnema
mirum DSM 43827]
gi|255923734|gb|ACU39245.1| chromosome segregation and condensation protein, ScpB [Actinosynnema
mirum DSM 43827]
Length=193
Score = 231 bits (589), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 117/178 (66%), Positives = 137/178 (77%), Gaps = 0/178 (0%)
Query 24 DADELKRVLEALLLVIDTPVTADALAAATEQPVYRVAAKLQLMADELTGRDSGIDLRHTS 83
D E + LE++LLV+DTP+ LA EQP RV A L+ M++ T SGIDLR
Sbjct 16 DDAEFESALESVLLVVDTPIDEQQLAGVFEQPARRVKATLRRMSERYTASGSGIDLRRIG 75
Query 84 EGWRMYTRARFAPYVEKLLLDGARTKLTRAALETLAVVAYRQPVTRARVSAVRGVNVDAV 143
+GWR YTR R AP+VEKLLLDG R KLTRAALETLAV+AYRQPVTRARV+AVRGVNVD V
Sbjct 76 DGWRFYTRDRHAPFVEKLLLDGQRAKLTRAALETLAVIAYRQPVTRARVAAVRGVNVDGV 135
Query 144 MRTLLARGLITEVGTDADTGAVTFATTELFLERLGLTSLSELPDIAPLLPDVDTIDDL 201
+RTL+ARGLI E G D DTG + + TTELFLERLGL SL++LP IAPLLP+VD IDD+
Sbjct 136 IRTLVARGLIAEAGNDNDTGGILYRTTELFLERLGLASLTDLPPIAPLLPEVDAIDDV 193
>gi|312139847|ref|YP_004007183.1| chromosome segregation and condensation protein scpb [Rhodococcus
equi 103S]
gi|311889186|emb|CBH48500.1| chromosome segregation and condensation protein ScpB [Rhodococcus
equi 103S]
Length=237
Score = 228 bits (581), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 128/196 (66%), Positives = 156/196 (80%), Gaps = 0/196 (0%)
Query 19 EPAELDADELKRVLEALLLVIDTPVTADALAAATEQPVYRVAAKLQLMADELTGRDSGID 78
E EL EL LE++LLV+DTP ++ LA P RV L+ MA + T R SGID
Sbjct 20 EFTELPDSELAAALESMLLVVDTPASSAMLADVVGVPEARVETMLRTMAADFTERGSGID 79
Query 79 LRHTSEGWRMYTRARFAPYVEKLLLDGARTKLTRAALETLAVVAYRQPVTRARVSAVRGV 138
LR+ +GWR YTR +APYVE+LLLDGAR+KLTRAALETLAV+AYRQP+TRARVSAVRGV
Sbjct 80 LRYAGDGWRFYTRTEYAPYVERLLLDGARSKLTRAALETLAVIAYRQPLTRARVSAVRGV 139
Query 139 NVDAVMRTLLARGLITEVGTDADTGAVTFATTELFLERLGLTSLSELPDIAPLLPDVDTI 198
NVD V+R+LLARGLITE G D D+GA T+ATTELFLERLGL SL++LP +APLLPDVD I
Sbjct 140 NVDGVIRSLLARGLITEAGVDTDSGATTYATTELFLERLGLASLADLPPLAPLLPDVDVI 199
Query 199 DDLSESLDSEPRFIKL 214
DD++ESL+++PRF ++
Sbjct 200 DDITESLEADPRFARM 215
>gi|325674276|ref|ZP_08153965.1| segregation and condensation protein B [Rhodococcus equi ATCC
33707]
gi|325554956|gb|EGD24629.1| segregation and condensation protein B [Rhodococcus equi ATCC
33707]
Length=237
Score = 227 bits (578), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 127/196 (65%), Positives = 156/196 (80%), Gaps = 0/196 (0%)
Query 19 EPAELDADELKRVLEALLLVIDTPVTADALAAATEQPVYRVAAKLQLMADELTGRDSGID 78
E EL EL LE++LLV+DTP ++ LA P RV L+ MA + T R SGID
Sbjct 20 EFTELPDSELAAALESMLLVVDTPASSAMLADVVGVPEARVETMLRTMAADFTERGSGID 79
Query 79 LRHTSEGWRMYTRARFAPYVEKLLLDGARTKLTRAALETLAVVAYRQPVTRARVSAVRGV 138
LR+ +GWR YTR +APYVE+LLLDGAR+KLTRAALETLAV+AYRQP+TRAR+SAVRGV
Sbjct 80 LRYAGDGWRFYTRTEYAPYVERLLLDGARSKLTRAALETLAVIAYRQPLTRARISAVRGV 139
Query 139 NVDAVMRTLLARGLITEVGTDADTGAVTFATTELFLERLGLTSLSELPDIAPLLPDVDTI 198
NVD V+R+LLARGLITE G D D+GA T+ATTELFLERLGL SL++LP +APLLPDVD I
Sbjct 140 NVDGVIRSLLARGLITEAGVDTDSGATTYATTELFLERLGLASLADLPPLAPLLPDVDVI 199
Query 199 DDLSESLDSEPRFIKL 214
DD++ESL+++PRF ++
Sbjct 200 DDITESLEADPRFARM 215
>gi|54023978|ref|YP_118220.1| hypothetical protein nfa20100 [Nocardia farcinica IFM 10152]
gi|54015486|dbj|BAD56856.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=225
Score = 225 bits (573), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 125/195 (65%), Positives = 150/195 (77%), Gaps = 0/195 (0%)
Query 20 PAELDADELKRVLEALLLVIDTPVTADALAAATEQPVYRVAAKLQLMADELTGRDSGIDL 79
P LD E + LEA+LLV+D P + LAAA + RV A L+ M+ ELT R SGIDL
Sbjct 17 PPVLDDAEFRSALEAMLLVVDAPAPVEQLAAALDDTTERVEATLRQMSAELTARGSGIDL 76
Query 80 RHTSEGWRMYTRARFAPYVEKLLLDGARTKLTRAALETLAVVAYRQPVTRARVSAVRGVN 139
R +GWR YTR +APYVE++LLDGARTKLTRAALETLAVVAYRQPVTR RVSAVRGVN
Sbjct 77 RFVGDGWRFYTRTEYAPYVERVLLDGARTKLTRAALETLAVVAYRQPVTRNRVSAVRGVN 136
Query 140 VDAVMRTLLARGLITEVGTDADTGAVTFATTELFLERLGLTSLSELPDIAPLLPDVDTID 199
VD VMRTLLARGLI E G D +T + TTELFLER+GL SLS+LP +APLLP VD ID
Sbjct 137 VDGVMRTLLARGLIAEAGVDPETNGTLYRTTELFLERIGLASLSDLPPLAPLLPGVDLID 196
Query 200 DLSESLDSEPRFIKL 214
++++SL+++PR+ +L
Sbjct 197 EINDSLETDPRYTRL 211
>gi|302528006|ref|ZP_07280348.1| segregation and condensation protein B [Streptomyces sp. AA4]
gi|302436901|gb|EFL08717.1| segregation and condensation protein B [Streptomyces sp. AA4]
Length=245
Score = 223 bits (568), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 111/164 (68%), Positives = 133/164 (82%), Gaps = 0/164 (0%)
Query 38 VIDTPVTADALAAATEQPVYRVAAKLQLMADELTGRDSGIDLRHTSEGWRMYTRARFAPY 97
V+D+P+ D+LA +QPV RV L+ MA + R SGIDLR EGWR YTR +AP+
Sbjct 82 VVDSPIGEDSLAETLDQPVARVTVALRTMAQKFAERASGIDLRRVGEGWRFYTRDTYAPF 141
Query 98 VEKLLLDGARTKLTRAALETLAVVAYRQPVTRARVSAVRGVNVDAVMRTLLARGLITEVG 157
VEKLLLDG R+KLTRAALE+LAV+AYRQPVTRARV+AVRGVNVD V+RTLLARGLI E+G
Sbjct 142 VEKLLLDGQRSKLTRAALESLAVIAYRQPVTRARVAAVRGVNVDGVIRTLLARGLIEEMG 201
Query 158 TDADTGAVTFATTELFLERLGLTSLSELPDIAPLLPDVDTIDDL 201
TD +T + TTELFLERLGL+SL++LP IAPLLP+VDTIDD+
Sbjct 202 TDPETTGTLYVTTELFLERLGLSSLNDLPPIAPLLPEVDTIDDI 245
>gi|319949183|ref|ZP_08023272.1| chromosome segregation and condensation protein ScpB [Dietzia
cinnamea P4]
gi|319437169|gb|EFV92200.1| chromosome segregation and condensation protein ScpB [Dietzia
cinnamea P4]
Length=242
Score = 221 bits (563), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 112/174 (65%), Positives = 133/174 (77%), Gaps = 0/174 (0%)
Query 38 VIDTPVTADALAAATEQPVYRVAAKLQLMADELTGRDSGIDLRHTSEGWRMYTRARFAPY 97
V+D P +ALAA V V A+LQ +ELT SGIDLR T +GWR+YTR APY
Sbjct 48 VVDQPTAENALAAVAGSTVTEVEAELQAWREELTAAGSGIDLRRTGDGWRLYTRRELAPY 107
Query 98 VEKLLLDGARTKLTRAALETLAVVAYRQPVTRARVSAVRGVNVDAVMRTLLARGLITEVG 157
VE+LL DG ++LTRAALETLAV+AYRQPVTR+R++AVRGVNVD VMRTL+ARGL E G
Sbjct 108 VERLLTDGTSSRLTRAALETLAVIAYRQPVTRSRIAAVRGVNVDGVMRTLVARGLAVECG 167
Query 158 TDADTGAVTFATTELFLERLGLTSLSELPDIAPLLPDVDTIDDLSESLDSEPRF 211
TDADTG + + TTELFLERLGL SL ELPDIAPLLPDVD +D++S+ +PR
Sbjct 168 TDADTGGMLYRTTELFLERLGLASLDELPDIAPLLPDVDLVDEMSDDPAEDPRI 221
>gi|300787859|ref|YP_003768150.1| segregation and condensation protein B [Amycolatopsis mediterranei
U32]
gi|299797373|gb|ADJ47748.1| segregation and condensation protein B [Amycolatopsis mediterranei
U32]
gi|340529431|gb|AEK44636.1| segregation and condensation protein B [Amycolatopsis mediterranei
S699]
Length=280
Score = 218 bits (555), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 108/165 (66%), Positives = 130/165 (79%), Gaps = 0/165 (0%)
Query 38 VIDTPVTADALAAATEQPVYRVAAKLQLMADELTGRDSGIDLRHTSEGWRMYTRARFAPY 97
++D+P + LA QP R+ L+ MA + T R SGIDLR EGWR YTR +AP+
Sbjct 116 IVDSPAGEELLAGTLGQPKSRIVVALRTMAQKFTDRASGIDLRRVGEGWRFYTRDVYAPF 175
Query 98 VEKLLLDGARTKLTRAALETLAVVAYRQPVTRARVSAVRGVNVDAVMRTLLARGLITEVG 157
VEKLLLDG R+KLTRAALE+LAV+AYRQPVTRARV+AVRGVNVD V+RTLLARGLI E+G
Sbjct 176 VEKLLLDGQRSKLTRAALESLAVIAYRQPVTRARVAAVRGVNVDGVIRTLLARGLIEEMG 235
Query 158 TDADTGAVTFATTELFLERLGLTSLSELPDIAPLLPDVDTIDDLS 202
TD +T + TTELFLERLGL+SL++LP IAPLLP+VDTIDD+
Sbjct 236 TDPETTGTLYVTTELFLERLGLSSLNDLPAIAPLLPEVDTIDDIQ 280
>gi|262202717|ref|YP_003273925.1| segregation and condensation protein B [Gordonia bronchialis
DSM 43247]
gi|262086064|gb|ACY22032.1| segregation and condensation protein B [Gordonia bronchialis
DSM 43247]
Length=229
Score = 214 bits (545), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 134/199 (68%), Positives = 155/199 (78%), Gaps = 1/199 (0%)
Query 23 LDADELKRVLEALLLVIDTPVTADALAAATEQPVYRVAAKLQLMADELTGRDSGIDLRHT 82
LD L+ LEA+LLV+DTP T D LA A +Q RV L M+ +LT SGIDLR
Sbjct 22 LDDASLRSALEAVLLVVDTPATTDELATAVDQDKRRVQDMLNSMSSDLTASGSGIDLRFA 81
Query 83 SEGWRMYTRARFAPYVEKLLLDGARTKLTRAALETLAVVAYRQPVTRARVSAVRGVNVDA 142
+GWR YTRA +APYVE+LLLDGAR+KLTRAALETLAV+AYRQPV+RARVSA+RGVNVD
Sbjct 82 GDGWRFYTRAEYAPYVERLLLDGARSKLTRAALETLAVIAYRQPVSRARVSAIRGVNVDG 141
Query 143 VMRTLLARGLITEVGTDADTGAVTFATTELFLERLGLTSLSELPDIAPLLPDVDTIDDLS 202
V+RTL+ARGLI EVGTD T A T+ TTELFLERLGL SL ELPD+APLLPD+D IDDL
Sbjct 142 VIRTLVARGLINEVGTDPQTTATTYGTTELFLERLGLASLDELPDLAPLLPDIDLIDDLD 201
Query 203 ESLDSEPRFIKLTGELASE 221
E L ++PRF KL G AS+
Sbjct 202 EELLADPRFAKL-GRQASD 219
>gi|295839694|ref|ZP_06826627.1| segregation and condensation protein B [Streptomyces sp. SPB74]
gi|295827610|gb|EFG65501.1| segregation and condensation protein B [Streptomyces sp. SPB74]
Length=242
Score = 202 bits (515), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 104/192 (55%), Positives = 139/192 (73%), Gaps = 5/192 (2%)
Query 20 PAELDADELKRVLEALLLVIDTPVTADALAAATEQPVYRVAAKLQLMADELTGRDSGIDL 79
PA LD L+ LEA+L+V+D P T + LA ++PV +VAA L+ +ADE T + G +L
Sbjct 24 PAGLD---LRGALEAVLMVVDEPATEEHLAKVLQRPVRQVAAALRALADEYTAQGRGFEL 80
Query 80 RHTSEGWRMYTRARFAPYVEKLLLDGARTKLTRAALETLAVVAYRQPVTRARVSAVRGVN 139
R + GWR Y+RA +A VE +LDG + +LT+AALETLAVVAYRQPV+RARVSAVRGVN
Sbjct 81 RLVAGGWRFYSRATYAAAVESFVLDGQQARLTQAALETLAVVAYRQPVSRARVSAVRGVN 140
Query 140 VDAVMRTLLARGLITEVGTDADTGAVTFATTELFLERLGLTSLSELPDIAPLLPDVDTID 199
D VMRTLL RGL+ E GT+ ++GA+ + TT FLER+GL L ELP++AP LP+ + I+
Sbjct 141 CDGVMRTLLQRGLVEEAGTERESGAILYRTTHYFLERMGLRGLDELPELAPFLPEAEAIE 200
Query 200 DLSESLDSEPRF 211
+E+L+ P F
Sbjct 201 --AETLEGVPSF 210
>gi|300781240|ref|ZP_07091094.1| segregation and condensation protein B [Corynebacterium genitalium
ATCC 33030]
gi|300532947|gb|EFK54008.1| segregation and condensation protein B [Corynebacterium genitalium
ATCC 33030]
Length=187
Score = 201 bits (512), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 104/174 (60%), Positives = 131/174 (76%), Gaps = 0/174 (0%)
Query 27 ELKRVLEALLLVIDTPVTADALAAATEQPVYRVAAKLQLMADELTGRDSGIDLRHTSEGW 86
+L+ +E+++LV++TP TA+ LA A PV V +L+ A EL R SG+DLR T EGW
Sbjct 12 QLRSQIESIILVVETPATAEDLAGALSVPVSDVRGELEAWAAELNDRGSGMDLRETLEGW 71
Query 87 RMYTRARFAPYVEKLLLDGARTKLTRAALETLAVVAYRQPVTRARVSAVRGVNVDAVMRT 146
R+YTR A VE LLDG +TKL+RAA+ETLAVVAYRQPVTRA+V+A+RGVNVD VMRT
Sbjct 72 RLYTRPANAEVVEAFLLDGTQTKLSRAAMETLAVVAYRQPVTRAQVAAIRGVNVDGVMRT 131
Query 147 LLARGLITEVGTDADTGAVTFATTELFLERLGLTSLSELPDIAPLLPDVDTIDD 200
L RGLI EV D +GA + TTELFLE++G+ SL LPD+APLLPDVD I++
Sbjct 132 LTLRGLIAEVDPDESSGAHRYITTELFLEQIGIDSLDRLPDLAPLLPDVDAIEE 185
>gi|302550432|ref|ZP_07302774.1| segregation and condensation protein B [Streptomyces viridochromogenes
DSM 40736]
gi|302468050|gb|EFL31143.1| segregation and condensation protein B [Streptomyces viridochromogenes
DSM 40736]
Length=228
Score = 200 bits (509), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 105/197 (54%), Positives = 140/197 (72%), Gaps = 5/197 (2%)
Query 15 PDIAEPAELDADELKRVLEALLLVIDTPVTADALAAATEQPVYRVAAKLQLMADELTGRD 74
P + A+LD LK LEA+L+V+D P T + LA ++P ++A L+ +ADE T +
Sbjct 10 PGLRTVADLD---LKPALEAVLMVVDEPATEEHLAKILDRPRRQIADALRELADEYTVQR 66
Query 75 SGIDLRHTSEGWRMYTRARFAPYVEKLLLDGARTKLTRAALETLAVVAYRQPVTRARVSA 134
G +LR + GWR YTRA FAP VE+ +LDG + +LT+AALETLAVVAYRQPV+R+RVSA
Sbjct 67 RGFELRFVANGWRFYTRAAFAPAVERFVLDGQQARLTQAALETLAVVAYRQPVSRSRVSA 126
Query 135 VRGVNVDAVMRTLLARGLITEVGTDADTGAVTFATTELFLERLGLTSLSELPDIAPLLPD 194
VRGVN D VMRTLL RGLI E GT+ +TGA+ + TT FLER+GL L ELP++AP LP+
Sbjct 127 VRGVNCDGVMRTLLQRGLIEEAGTEPETGAILYRTTNYFLERMGLRGLDELPELAPFLPE 186
Query 195 VDTIDDLSESLDSEPRF 211
+ I+ +E+ + P F
Sbjct 187 AEAIE--AETQEGVPSF 201
>gi|297198682|ref|ZP_06916079.1| segregation and condensation protein B [Streptomyces sviceus
ATCC 29083]
gi|197714569|gb|EDY58603.1| segregation and condensation protein B [Streptomyces sviceus
ATCC 29083]
Length=214
Score = 200 bits (509), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 97/185 (53%), Positives = 134/185 (73%), Gaps = 2/185 (1%)
Query 27 ELKRVLEALLLVIDTPVTADALAAATEQPVYRVAAKLQLMADELTGRDSGIDLRHTSEGW 86
+LK LEA+L+V+D P T + L+ E+P ++ L+ +A E + G +LRH + GW
Sbjct 19 DLKPALEAVLMVVDEPATEEHLSKILERPKRQITRALRELAGEYAAQGRGFELRHVANGW 78
Query 87 RMYTRARFAPYVEKLLLDGARTKLTRAALETLAVVAYRQPVTRARVSAVRGVNVDAVMRT 146
R YTRA +AP VE+ +LDG + +LT+AALETLAVVAYRQPV+R+RVSAVRGVN D VMRT
Sbjct 79 RFYTRAAYAPAVERFVLDGQQARLTQAALETLAVVAYRQPVSRSRVSAVRGVNCDGVMRT 138
Query 147 LLARGLITEVGTDADTGAVTFATTELFLERLGLTSLSELPDIAPLLPDVDTIDDLSESLD 206
LL RGL+ E GT+ +TGA+ + TT FLER+GL L ELP++AP LP+ + I+ +E+ +
Sbjct 139 LLQRGLVAEAGTEPETGAILYVTTNYFLERMGLRGLDELPELAPFLPEAEAIE--AETQE 196
Query 207 SEPRF 211
+ P F
Sbjct 197 AVPSF 201
>gi|291440522|ref|ZP_06579912.1| transcriptional regulator [Streptomyces ghanaensis ATCC 14672]
gi|291343417|gb|EFE70373.1| transcriptional regulator [Streptomyces ghanaensis ATCC 14672]
Length=230
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 100/185 (55%), Positives = 134/185 (73%), Gaps = 2/185 (1%)
Query 27 ELKRVLEALLLVIDTPVTADALAAATEQPVYRVAAKLQLMADELTGRDSGIDLRHTSEGW 86
+LK LEA+L+V+D PVT + LA ++P +RVA L+ +ADE T + G +LR + GW
Sbjct 25 DLKPALEAVLMVVDEPVTEEHLAKVLQRPGHRVADALRELADEYTAQGRGFELRFVAGGW 84
Query 87 RMYTRARFAPYVEKLLLDGARTKLTRAALETLAVVAYRQPVTRARVSAVRGVNVDAVMRT 146
R YTR +A VE +LDG + +LT+AALETLAVVAYRQPV+R+RVSAVRGVN D VMRT
Sbjct 85 RFYTRPEYAAAVEGFVLDGQQARLTQAALETLAVVAYRQPVSRSRVSAVRGVNCDGVMRT 144
Query 147 LLARGLITEVGTDADTGAVTFATTELFLERLGLTSLSELPDIAPLLPDVDTIDDLSESLD 206
LL RGL+ E GT+ +TGA+ + TT FLER+GL L ELP++AP LP+ + I+ +E+ +
Sbjct 145 LLQRGLVEEAGTEPETGAILYTTTNHFLERMGLRGLDELPELAPFLPEAEAIE--AETQE 202
Query 207 SEPRF 211
P F
Sbjct 203 GVPSF 207
>gi|302546512|ref|ZP_07298854.1| segregation and condensation protein B [Streptomyces hygroscopicus
ATCC 53653]
gi|302464130|gb|EFL27223.1| segregation and condensation protein B [Streptomyces himastatinicus
ATCC 53653]
Length=216
Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 102/193 (53%), Positives = 136/193 (71%), Gaps = 2/193 (1%)
Query 19 EPAELDADELKRVLEALLLVIDTPVTADALAAATEQPVYRVAAKLQLMADELTGRDSGID 78
EP+E+ A +L+ LEA+L+V+D P T + LA ++P +A L+ +ADE T + G +
Sbjct 9 EPSEVAALDLRPALEAVLMVVDEPATEEHLAKVLDRPRRAIAGALRELADEYTAQGRGFE 68
Query 79 LRHTSEGWRMYTRARFAPYVEKLLLDGARTKLTRAALETLAVVAYRQPVTRARVSAVRGV 138
LR + GWR YTR +A VE +LDG +LT+AALETLAVVAYRQPV+R+RVSAVRGV
Sbjct 69 LRLVAGGWRYYTRPAYAAAVEGFVLDGQHARLTQAALETLAVVAYRQPVSRSRVSAVRGV 128
Query 139 NVDAVMRTLLARGLITEVGTDADTGAVTFATTELFLERLGLTSLSELPDIAPLLPDVDTI 198
N D VMRTLL RGL+ E GT+ +TGA+ + TT FLER+GL L ELP++AP LP+VD +
Sbjct 129 NCDGVMRTLLQRGLVEEAGTEPETGAILYRTTNYFLERMGLRGLDELPELAPFLPEVDAV 188
Query 199 DDLSESLDSEPRF 211
+ ES + P F
Sbjct 189 E--GESQEGVPSF 199
>gi|284991417|ref|YP_003409971.1| chromosome segregation and condensation protein ScpB [Geodermatophilus
obscurus DSM 43160]
gi|284064662|gb|ADB75600.1| chromosome segregation and condensation protein, ScpB [Geodermatophilus
obscurus DSM 43160]
Length=279
Score = 199 bits (506), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 105/179 (59%), Positives = 131/179 (74%), Gaps = 0/179 (0%)
Query 22 ELDADELKRVLEALLLVIDTPVTADALAAATEQPVYRVAAKLQLMADELTGRDSGIDLRH 81
+LD L+ LEALL V+DTPV LA A PV RV L +A++ R +GI LR
Sbjct 96 DLDPAALRGGLEALLFVVDTPVDEVTLAGALRCPVPRVRTLLAELAEDYDRRGAGITLRR 155
Query 82 TSEGWRMYTRARFAPYVEKLLLDGARTKLTRAALETLAVVAYRQPVTRARVSAVRGVNVD 141
EGWR+YTR A VE+ L+DG R++LT+AALETLAV+AYRQPVTRARVSA+RGV VD
Sbjct 156 VGEGWRLYTREEHAGVVERYLVDGQRSRLTQAALETLAVIAYRQPVTRARVSAIRGVGVD 215
Query 142 AVMRTLLARGLITEVGTDADTGAVTFATTELFLERLGLTSLSELPDIAPLLPDVDTIDD 200
VMRTL++RGL++EVGTD D+G +ATT LFLERLGL SL ELP++ PLLP+ ++ D
Sbjct 216 GVMRTLMSRGLVSEVGTDPDSGGGLYATTPLFLERLGLESLDELPELGPLLPETSSLLD 274
>gi|258654178|ref|YP_003203334.1| chromosome segregation and condensation protein ScpB [Nakamurella
multipartita DSM 44233]
gi|258557403|gb|ACV80345.1| chromosome segregation and condensation protein, ScpB [Nakamurella
multipartita DSM 44233]
Length=205
Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 99/175 (57%), Positives = 129/175 (74%), Gaps = 0/175 (0%)
Query 27 ELKRVLEALLLVIDTPVTADALAAATEQPVYRVAAKLQLMADELTGRDSGIDLRHTSEGW 86
+L +EA+LLV DTP+ +AAA V A L +AD T +SGI+LR GW
Sbjct 31 DLAGAIEAVLLVADTPIPEAQIAAAVGHTPGHVRALLAELADNYTAANSGIELREFGGGW 90
Query 87 RMYTRARFAPYVEKLLLDGARTKLTRAALETLAVVAYRQPVTRARVSAVRGVNVDAVMRT 146
R YTR RFAP VE+ +LDGA+++L++AALETLAVVAYRQPVTRAR++AVRGVNVD V+RT
Sbjct 91 RFYTRDRFAPVVERFVLDGAQSRLSKAALETLAVVAYRQPVTRARIAAVRGVNVDGVIRT 150
Query 147 LLARGLITEVGTDADTGAVTFATTELFLERLGLTSLSELPDIAPLLPDVDTIDDL 201
L++RGLI + G DADTG + TT++FLER+GL L+ELP + PLLP+ +DD+
Sbjct 151 LMSRGLIQDCGIDADTGGTLYRTTDMFLERMGLGDLTELPSLGPLLPEAGELDDV 205
>gi|318061410|ref|ZP_07980131.1| ScpB-like chromosome partitioning protein [Streptomyces sp. SA3_actG]
gi|318078008|ref|ZP_07985340.1| ScpB-like chromosome partitioning protein [Streptomyces sp. SA3_actF]
Length=243
Score = 199 bits (505), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 104/198 (53%), Positives = 142/198 (72%), Gaps = 8/198 (4%)
Query 14 IPDIAEPAELDADELKRVLEALLLVIDTPVTADALAAATEQPVYRVAAKLQLMADELTGR 73
+PD+A+ LD L+ LEA+L+V+D P T + LA ++PV +VA L+ +ADE T +
Sbjct 22 VPDLAD---LD---LRPALEAVLMVVDEPATEEHLAKVLQRPVRQVAGALRALADEYTVQ 75
Query 74 DSGIDLRHTSEGWRMYTRARFAPYVEKLLLDGARTKLTRAALETLAVVAYRQPVTRARVS 133
G +LR + GWR Y+RA +A VE +LDG + +LT+AALETLAVVAYRQPV+RARVS
Sbjct 76 GRGFELRLVAGGWRFYSRATYAAAVESFVLDGQQARLTQAALETLAVVAYRQPVSRARVS 135
Query 134 AVRGVNVDAVMRTLLARGLITEVGTDADTGAVTFATTELFLERLGLTSLSELPDIAPLLP 193
AVRGVN D VMRTLL RGL+ E GT+ ++GA+ + TT FLER+GL L ELP++AP LP
Sbjct 136 AVRGVNCDGVMRTLLQRGLVEEAGTERESGAILYRTTHYFLERMGLRGLDELPELAPFLP 195
Query 194 DVDTIDDLSESLDSEPRF 211
+ + I+ +E+L+ P F
Sbjct 196 EAEAIE--AETLEGVPSF 211
>gi|29833053|ref|NP_827687.1| transcriptional regulator [Streptomyces avermitilis MA-4680]
gi|29610174|dbj|BAC74222.1| putative chromosome segregation and condensation protein B [Streptomyces
avermitilis MA-4680]
Length=216
Score = 198 bits (503), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 99/185 (54%), Positives = 134/185 (73%), Gaps = 2/185 (1%)
Query 27 ELKRVLEALLLVIDTPVTADALAAATEQPVYRVAAKLQLMADELTGRDSGIDLRHTSEGW 86
+LK LEA+L+V+D P T + LA E+P ++A L+ +ADE TG+ G +LR + GW
Sbjct 19 DLKPALEAVLMVVDEPATVEHLAKILERPKRQIADALRELADEYTGQGRGFELRLIAGGW 78
Query 87 RMYTRARFAPYVEKLLLDGARTKLTRAALETLAVVAYRQPVTRARVSAVRGVNVDAVMRT 146
R YTR ++A VE+ +LDG + +LT+AALETLAVVAYRQPV+R+RVSAVRGVN D VMRT
Sbjct 79 RFYTRPKYATAVERFVLDGQQARLTQAALETLAVVAYRQPVSRSRVSAVRGVNCDGVMRT 138
Query 147 LLARGLITEVGTDADTGAVTFATTELFLERLGLTSLSELPDIAPLLPDVDTIDDLSESLD 206
LL RGL+ E G + +TGA+ + TT FLER+GL L ELP++AP LP+ D I+ +E+ +
Sbjct 139 LLQRGLVEEAGAEPETGAILYRTTNYFLERMGLRGLDELPELAPFLPEADAIE--AETQE 196
Query 207 SEPRF 211
P F
Sbjct 197 GVPSF 201
Lambda K H
0.317 0.133 0.368
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 303731659968
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40