BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1727
Length=189
Score E
Sequences producing significant alignments: (Bits) Value
gi|15608865|ref|NP_216243.1| hypothetical protein Rv1727 [Mycoba... 376 7e-103
gi|121637635|ref|YP_977858.1| hypothetical protein BCG_1766 [Myc... 374 2e-102
gi|289757835|ref|ZP_06517213.1| conserved hypothetical protein [... 367 4e-100
gi|289753817|ref|ZP_06513195.1| conserved hypothetical protein [... 311 2e-83
gi|240169140|ref|ZP_04747799.1| hypothetical protein MkanA1_0748... 181 3e-44
gi|258651068|ref|YP_003200224.1| hypothetical protein Namu_0824 ... 81.3 7e-14
gi|256393651|ref|YP_003115215.1| hypothetical protein Caci_4511 ... 79.7 2e-13
gi|111021396|ref|YP_704368.1| hypothetical protein RHA1_ro04424 ... 78.6 4e-13
gi|331699459|ref|YP_004335698.1| hypothetical protein Psed_5718 ... 78.2 5e-13
gi|297194510|ref|ZP_06911908.1| conserved hypothetical protein [... 77.8 7e-13
gi|302530399|ref|ZP_07282741.1| predicted protein [Streptomyces ... 77.0 1e-12
gi|226363750|ref|YP_002781532.1| hypothetical protein ROP_43400 ... 76.6 2e-12
gi|336461601|gb|EGO40467.1| TIGR03086 family protein [Mycobacter... 76.3 2e-12
gi|297197037|ref|ZP_06914434.1| conserved hypothetical protein [... 76.3 2e-12
gi|41406348|ref|NP_959184.1| hypothetical protein MAP0250 [Mycob... 76.3 2e-12
gi|312194755|ref|YP_004014816.1| hypothetical protein FraEuI1c_0... 75.1 4e-12
gi|254773305|ref|ZP_05214821.1| hypothetical protein MaviaA2_012... 74.7 6e-12
gi|324997761|ref|ZP_08118873.1| hypothetical protein PseP1_03295... 74.7 6e-12
gi|111219853|ref|YP_710647.1| hypothetical protein FRAAL0359 [Fr... 74.7 6e-12
gi|118462650|ref|YP_879539.1| hypothetical protein MAV_0248 [Myc... 74.7 6e-12
gi|294630269|ref|ZP_06708829.1| conserved hypothetical protein [... 74.3 7e-12
gi|111019625|ref|YP_702597.1| hypothetical protein RHA1_ro02634 ... 73.6 1e-11
gi|284030442|ref|YP_003380373.1| hypothetical protein Kfla_2500 ... 73.6 1e-11
gi|291301022|ref|YP_003512300.1| hypothetical protein Snas_3545 ... 73.2 2e-11
gi|330466575|ref|YP_004404318.1| hypothetical protein VAB18032_1... 72.8 2e-11
gi|254822475|ref|ZP_05227476.1| hypothetical protein MintA_21251... 72.4 3e-11
gi|297156190|gb|ADI05902.1| hypothetical protein SBI_02781 [Stre... 71.2 7e-11
gi|345010171|ref|YP_004812525.1| hypothetical protein Strvi_2525... 71.2 7e-11
gi|284033714|ref|YP_003383645.1| hypothetical protein Kfla_5842 ... 70.5 1e-10
gi|297560803|ref|YP_003679777.1| hypothetical protein Ndas_1843 ... 70.5 1e-10
gi|271966734|ref|YP_003340930.1| hypothetical protein Sros_5427 ... 70.5 1e-10
gi|333992695|ref|YP_004525309.1| hypothetical protein JDM601_405... 69.7 2e-10
gi|345000316|ref|YP_004803170.1| hypothetical protein SACTE_2747... 69.7 2e-10
gi|302541611|ref|ZP_07293953.1| conserved hypothetical protein [... 69.3 2e-10
gi|256378429|ref|YP_003102089.1| hypothetical protein Amir_4394 ... 69.3 2e-10
gi|158318360|ref|YP_001510868.1| hypothetical protein Franean1_6... 69.3 2e-10
gi|134101454|ref|YP_001107115.1| hypothetical protein SACE_4924 ... 69.3 2e-10
gi|342860029|ref|ZP_08716681.1| hypothetical protein MCOL_14160 ... 68.9 4e-10
gi|169629516|ref|YP_001703165.1| hypothetical protein MAB_2430c ... 68.9 4e-10
gi|296166899|ref|ZP_06849316.1| conserved hypothetical protein [... 68.2 6e-10
gi|300789626|ref|YP_003769917.1| hypothetical protein AMED_7807 ... 68.2 6e-10
gi|134100251|ref|YP_001105912.1| hypothetical protein SACE_3715 ... 67.4 9e-10
gi|108801947|ref|YP_642144.1| hypothetical protein Mmcs_4984 [My... 67.4 1e-09
gi|226364559|ref|YP_002782341.1| hypothetical protein ROP_51490 ... 66.6 2e-09
gi|302548167|ref|ZP_07300509.1| basic proline-rich protein [Stre... 66.6 2e-09
gi|134100366|ref|YP_001106027.1| hypothetical protein SACE_3831 ... 66.2 2e-09
gi|290955159|ref|YP_003486341.1| hypothetical protein SCAB_5731 ... 66.2 2e-09
gi|320010151|gb|ADW05001.1| hypothetical protein Sfla_3581 [Stre... 66.2 2e-09
gi|300784522|ref|YP_003764813.1| hypothetical protein AMED_2616 ... 66.2 2e-09
gi|256397980|ref|YP_003119544.1| hypothetical protein Caci_8890 ... 65.5 3e-09
>gi|15608865|ref|NP_216243.1| hypothetical protein Rv1727 [Mycobacterium tuberculosis H37Rv]
gi|15841189|ref|NP_336226.1| hypothetical protein MT1768 [Mycobacterium tuberculosis CDC1551]
gi|31792915|ref|NP_855408.1| hypothetical protein Mb1756 [Mycobacterium bovis AF2122/97]
69 more sequence titles
Length=189
Score = 376 bits (966), Expect = 7e-103, Method: Compositional matrix adjust.
Identities = 189/189 (100%), Positives = 189/189 (100%), Gaps = 0/189 (0%)
Query 1 MDLYSNLVEAEQRLVALVSSIEADSYSSPTPCDRWDVRALLSHALASIDAFAAAVDGAPG 60
MDLYSNLVEAEQRLVALVSSIEADSYSSPTPCDRWDVRALLSHALASIDAFAAAVDGAPG
Sbjct 1 MDLYSNLVEAEQRLVALVSSIEADSYSSPTPCDRWDVRALLSHALASIDAFAAAVDGAPG 60
Query 61 PDMAQVFSGADIVGDDPLGATQRITRRSQAAWSTVRDLNAELSTFIGVMPAGQALAIITF 120
PDMAQVFSGADIVGDDPLGATQRITRRSQAAWSTVRDLNAELSTFIGVMPAGQALAIITF
Sbjct 61 PDMAQVFSGADIVGDDPLGATQRITRRSQAAWSTVRDLNAELSTFIGVMPAGQALAIITF 120
Query 121 STVVHGWDLAVATGQAGELPEHLAEAAQQVAAELVPVLRPRGLFAHDVDLAGEATPTQRL 180
STVVHGWDLAVATGQAGELPEHLAEAAQQVAAELVPVLRPRGLFAHDVDLAGEATPTQRL
Sbjct 121 STVVHGWDLAVATGQAGELPEHLAEAAQQVAAELVPVLRPRGLFAHDVDLAGEATPTQRL 180
Query 181 VALTGRKPR 189
VALTGRKPR
Sbjct 181 VALTGRKPR 189
>gi|121637635|ref|YP_977858.1| hypothetical protein BCG_1766 [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224990110|ref|YP_002644797.1| hypothetical protein JTY_1741 [Mycobacterium bovis BCG str. Tokyo
172]
gi|121493282|emb|CAL71753.1| Conserved hypothetical protein [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224773223|dbj|BAH26029.1| hypothetical protein JTY_1741 [Mycobacterium bovis BCG str. Tokyo
172]
gi|341601653|emb|CCC64326.1| conserved hypothetical protein [Mycobacterium bovis BCG str.
Moreau RDJ]
Length=189
Score = 374 bits (961), Expect = 2e-102, Method: Compositional matrix adjust.
Identities = 188/189 (99%), Positives = 189/189 (100%), Gaps = 0/189 (0%)
Query 1 MDLYSNLVEAEQRLVALVSSIEADSYSSPTPCDRWDVRALLSHALASIDAFAAAVDGAPG 60
MDLYSNLVEAEQRLVALVSSI+ADSYSSPTPCDRWDVRALLSHALASIDAFAAAVDGAPG
Sbjct 1 MDLYSNLVEAEQRLVALVSSIDADSYSSPTPCDRWDVRALLSHALASIDAFAAAVDGAPG 60
Query 61 PDMAQVFSGADIVGDDPLGATQRITRRSQAAWSTVRDLNAELSTFIGVMPAGQALAIITF 120
PDMAQVFSGADIVGDDPLGATQRITRRSQAAWSTVRDLNAELSTFIGVMPAGQALAIITF
Sbjct 61 PDMAQVFSGADIVGDDPLGATQRITRRSQAAWSTVRDLNAELSTFIGVMPAGQALAIITF 120
Query 121 STVVHGWDLAVATGQAGELPEHLAEAAQQVAAELVPVLRPRGLFAHDVDLAGEATPTQRL 180
STVVHGWDLAVATGQAGELPEHLAEAAQQVAAELVPVLRPRGLFAHDVDLAGEATPTQRL
Sbjct 121 STVVHGWDLAVATGQAGELPEHLAEAAQQVAAELVPVLRPRGLFAHDVDLAGEATPTQRL 180
Query 181 VALTGRKPR 189
VALTGRKPR
Sbjct 181 VALTGRKPR 189
>gi|289757835|ref|ZP_06517213.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|289713399|gb|EFD77411.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
Length=185
Score = 367 bits (943), Expect = 4e-100, Method: Compositional matrix adjust.
Identities = 185/185 (100%), Positives = 185/185 (100%), Gaps = 0/185 (0%)
Query 1 MDLYSNLVEAEQRLVALVSSIEADSYSSPTPCDRWDVRALLSHALASIDAFAAAVDGAPG 60
MDLYSNLVEAEQRLVALVSSIEADSYSSPTPCDRWDVRALLSHALASIDAFAAAVDGAPG
Sbjct 1 MDLYSNLVEAEQRLVALVSSIEADSYSSPTPCDRWDVRALLSHALASIDAFAAAVDGAPG 60
Query 61 PDMAQVFSGADIVGDDPLGATQRITRRSQAAWSTVRDLNAELSTFIGVMPAGQALAIITF 120
PDMAQVFSGADIVGDDPLGATQRITRRSQAAWSTVRDLNAELSTFIGVMPAGQALAIITF
Sbjct 61 PDMAQVFSGADIVGDDPLGATQRITRRSQAAWSTVRDLNAELSTFIGVMPAGQALAIITF 120
Query 121 STVVHGWDLAVATGQAGELPEHLAEAAQQVAAELVPVLRPRGLFAHDVDLAGEATPTQRL 180
STVVHGWDLAVATGQAGELPEHLAEAAQQVAAELVPVLRPRGLFAHDVDLAGEATPTQRL
Sbjct 121 STVVHGWDLAVATGQAGELPEHLAEAAQQVAAELVPVLRPRGLFAHDVDLAGEATPTQRL 180
Query 181 VALTG 185
VALTG
Sbjct 181 VALTG 185
>gi|289753817|ref|ZP_06513195.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
gi|289694404|gb|EFD61833.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
Length=187
Score = 311 bits (798), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 163/189 (87%), Positives = 166/189 (88%), Gaps = 2/189 (1%)
Query 1 MDLYSNLVEAEQRLVALVSSIEADSYSSPTPCDRWDVRALLSHALASIDAFAAAVDGAPG 60
MDLYSNLVEAEQRLVALVSSIEADSYSSPTPCDRWDVRALLSHALASIDAFAAAVDGAPG
Sbjct 1 MDLYSNLVEAEQRLVALVSSIEADSYSSPTPCDRWDVRALLSHALASIDAFAAAVDGAPG 60
Query 61 PDMAQVFSGADIVGDDPLGATQRITRRSQAAWSTVRDLNAELSTFIGVMPAGQALAIITF 120
PDMAQVFSGADIVGDDPLGATQRITRRSQAAWSTVRDLNAELSTFIGVMPAGQALAIITF
Sbjct 61 PDMAQVFSGADIVGDDPLGATQRITRRSQAAWSTVRDLNAELSTFIGVMPAGQALAIITF 120
Query 121 STVVHGWDLAVATGQAGELPEHLAEAAQQVAAELVPVLRPRGLFAHDVDLAGEATPTQRL 180
STVVHGWDLAVATGQAGELPEHLA+ + + L L L ATPTQRL
Sbjct 121 STVVHGWDLAVATGQAGELPEHLADRFNWLLMTI--RLSISSLAGTARTLVAVATPTQRL 178
Query 181 VALTGRKPR 189
VALTGRKPR
Sbjct 179 VALTGRKPR 187
>gi|240169140|ref|ZP_04747799.1| hypothetical protein MkanA1_07489 [Mycobacterium kansasii ATCC
12478]
Length=189
Score = 181 bits (460), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 92/188 (49%), Positives = 125/188 (67%), Gaps = 0/188 (0%)
Query 1 MDLYSNLVEAEQRLVALVSSIEADSYSSPTPCDRWDVRALLSHALASIDAFAAAVDGAPG 60
M+ L +A++RLV LVS++ + +P+PC W VR+LLSH +A+IDAFAAA+DG G
Sbjct 1 MNSLDLLQQADKRLVDLVSTLSVSNLDAPSPCSGWSVRSLLSHTVATIDAFAAALDGQGG 60
Query 61 PDMAQVFSGADIVGDDPLGATQRITRRSQAAWSTVRDLNAELSTFIGVMPAGQALAIITF 120
P ++FSGADI+G PL ++ RSQ AW+T+ D + T IG MPA QA+ IIT+
Sbjct 61 PTEQELFSGADILGSAPLTVVEKSVDRSQQAWTTITDWERPILTVIGEMPARQAIGIITY 120
Query 121 STVVHGWDLAVATGQAGELPEHLAEAAQQVAAELVPVLRPRGLFAHDVDLAGEATPTQRL 180
ST++H WDLAVA G+ E A A+ V ++LVP LRP+ LF +V +ATPTQR+
Sbjct 121 STLIHSWDLAVAIGKPIHFDEAEATLAEAVGSQLVPALRPQDLFGPEVAAGADATPTQRV 180
Query 181 VALTGRKP 188
VA GR P
Sbjct 181 VAFAGRNP 188
>gi|258651068|ref|YP_003200224.1| hypothetical protein Namu_0824 [Nakamurella multipartita DSM
44233]
gi|258554293|gb|ACV77235.1| hypothetical protein Namu_0824 [Nakamurella multipartita DSM
44233]
Length=198
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/143 (33%), Positives = 70/143 (49%), Gaps = 2/143 (1%)
Query 6 NLVEAEQRLVALVSSIEADSYSSPTPCDRWDVRALLSHALASIDAFAAAVDGAPGPDMAQ 65
L +A + LV + + +PTPC WD RALL+H + +F + + G P P Q
Sbjct 11 ELRQACAGMQTLVDGVRPAQWGAPTPCSEWDARALLNHVVFGNRSFTSILHGDPAPPQEQ 70
Query 66 V--FSGADIVGDDPLGATQRITRRSQAAWSTVRDLNAELSTFIGVMPAGQALAIITFSTV 123
+ D +GDDP A + AA++ L E + +G +P + T+
Sbjct 71 IRTMRDRDYLGDDPAAAWRDSADGLLAAFTGPEVLGREFRSPLGPLPGAGLARLRITETL 130
Query 124 VHGWDLAVATGQAGELPEHLAEA 146
VHGWDLA ATGQ+ P+ + EA
Sbjct 131 VHGWDLARATGQSAPFPQEIVEA 153
>gi|256393651|ref|YP_003115215.1| hypothetical protein Caci_4511 [Catenulispora acidiphila DSM
44928]
gi|256359877|gb|ACU73374.1| conserved hypothetical protein [Catenulispora acidiphila DSM
44928]
Length=188
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/188 (30%), Positives = 92/188 (49%), Gaps = 7/188 (3%)
Query 3 LYSNLVEAEQRLVALVSSIEADSYSSPTPCDRWDVRALLSH-ALASIDAFAA-AVDGAPG 60
++ L EA + +V++ ++ + TPC +WDV+ LL+H L + +F A G
Sbjct 4 IHKQLTEAADQAATIVANTDSSQFGDKTPCTQWDVKELLNHLILWTGYSFERRARSEQVG 63
Query 61 PDMAQVFSGADIVGDDPLGATQRIT-RRSQAAWSTVRDLNAELSTFIGVMPAGQALAIIT 119
PD+ + D + A R R+ AAW+ ++E+ T G PA Q ++
Sbjct 64 PDLTE----RDFAAEPDYAAAYRAQLDRALAAWAPAEVWDSEIDTGGGKTPAPQIAEMVL 119
Query 120 FSTVVHGWDLAVATGQAGELPEHLAEAAQQVAAELVPVLRPRGLFAHDVDLAGEATPTQR 179
V+HGWDLA ATGQ + + +A + A + R FA +V + +ATP +
Sbjct 120 MEMVLHGWDLATATGQPYQTSDEIAATVAKAVAASAEMYRQYDGFAAEVKVGADATPLDK 179
Query 180 LVALTGRK 187
+A +GRK
Sbjct 180 ALAESGRK 187
>gi|111021396|ref|YP_704368.1| hypothetical protein RHA1_ro04424 [Rhodococcus jostii RHA1]
gi|110820926|gb|ABG96210.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=202
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/181 (36%), Positives = 84/181 (47%), Gaps = 4/181 (2%)
Query 9 EAEQRLVALVSSIEADSYSSPTPCDRWDVRALLSHALASIDAFAAAVDGAPGPDMAQVFS 68
EA ALV + D ++ TPC +DVR LL H +A+++ A V G G
Sbjct 22 EALAWTTALVEKVRDDQLTAATPCADFDVRTLLGHLVATVER--ARVIGEGGDPGTVPLV 79
Query 69 GADIVGDDPLGATQRITRRSQAAWSTVRDLNAELSTFIGVMPAGQALAIITFSTVVHGWD 128
DI D + T R W+ L+A ++ G +P A+ T+VHGWD
Sbjct 80 VTDIPDDGYADTYRSATDRMWPVWADDSRLDATVTAPWGTVPGRAAIWGYINETLVHGWD 139
Query 129 LAVATGQAGELPEHLAEAAQQVAAELVPVLRPRGL--FAHDVDLAGEATPTQRLVALTGR 186
LAVATGQ E LAEA VA +P G FA V+ A PT+RL +GR
Sbjct 140 LAVATGQPSETRPELAEAMLAVARHAIPAETRGGHVPFADVVEPHPTAGPTERLANWSGR 199
Query 187 K 187
K
Sbjct 200 K 200
>gi|331699459|ref|YP_004335698.1| hypothetical protein Psed_5718 [Pseudonocardia dioxanivorans
CB1190]
gi|326954148|gb|AEA27845.1| Conserved hypothetical protein CHP03086 [Pseudonocardia dioxanivorans
CB1190]
Length=196
Score = 78.2 bits (191), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/188 (35%), Positives = 87/188 (47%), Gaps = 32/188 (17%)
Query 16 ALVSSIEADSYSSPTPCDRWDVRALLSHALASIDAFAAA------------VDGAPGPDM 63
LV ++ AD Y PTPC +DVR L++H A++ A ++G P D+
Sbjct 24 GLVDAVPADRYGDPTPCTDFDVRTLVAHLAATVGRVYAVSIGESALSRPALIEGIPDEDL 83
Query 64 AQVFSGADIVGD-DPLGATQRITRRSQAAWSTVRDLNAELSTFIGVMPAGQALAIITFST 122
A F A V D DPL W L++ ++ G +P A+
Sbjct 84 AATFGRA--VDDLDPL-------------WDNDELLDSTVTVPWGEVPGRGAVWGYLNEA 128
Query 123 VVHGWDLAVATGQAGELPEHLAEAAQQVAAELVPVLRPRG---LFAHDVDLAGEATPTQR 179
+VHGWDLAVATGQ E LAEA V +P +PRG F V+ A +A PT+R
Sbjct 129 LVHGWDLAVATGQDAEADPALAEATFAVIVRFLPA-QPRGGPVPFGQVVEPAADAGPTER 187
Query 180 LVALTGRK 187
L GR+
Sbjct 188 LANWAGRR 195
>gi|297194510|ref|ZP_06911908.1| conserved hypothetical protein [Streptomyces pristinaespiralis
ATCC 25486]
gi|297152285|gb|EFH31634.1| conserved hypothetical protein [Streptomyces pristinaespiralis
ATCC 25486]
Length=193
Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/186 (32%), Positives = 82/186 (45%), Gaps = 2/186 (1%)
Query 3 LYSNLVEAEQRLVALVSSIEADSYSSPTPCDRWDVRALLSHALASIDAFAAAV-DGAPGP 61
L + EA V ++ D + PTPC +W VR L++H A V DGA
Sbjct 8 LLTRHTEALALFTDRVHAVRDDQWDDPTPCTQWSVRDLVNHLTAEQLWVPDLVTDGATIE 67
Query 62 DMAQVFSGADIVGDDPLGATQRITRRSQAAWSTVRDLNAELSTFIGVMPAGQALAIITFS 121
D+ + G D++GD P A R ++ A+S L + G PA + +
Sbjct 68 DIGDAYDG-DVLGDRPRQAWDSAARAARKAFSGEGALERTVQLSYGETPATAYCSQMISD 126
Query 122 TVVHGWDLAVATGQAGELPEHLAEAAQQVAAELVPVLRPRGLFAHDVDLAGEATPTQRLV 181
VVH WDL+ A G LPE L + A P L GLFA ++ P RL+
Sbjct 127 AVVHSWDLSRAIGAEERLPEALVAFTMKEVAPYAPELAKSGLFAPPIEPPPGDDPQTRLL 186
Query 182 ALTGRK 187
A+ GR+
Sbjct 187 AMLGRR 192
>gi|302530399|ref|ZP_07282741.1| predicted protein [Streptomyces sp. AA4]
gi|302439294|gb|EFL11110.1| predicted protein [Streptomyces sp. AA4]
Length=214
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/189 (33%), Positives = 89/189 (48%), Gaps = 5/189 (2%)
Query 1 MDLYSNLVEAEQRLVALVSSIEADSYSSPTPCDRWDVRALLSHALASIDAFAAAVDGAPG 60
M+ +L A ALV+ + + +PTPC W VR L++H + F A + G G
Sbjct 29 MNPVDDLAAALDSTSALVAGVS--RWDAPTPCPEWTVRDLVNHLVLGHRLFTAVLRGEEG 86
Query 61 PDMAQVFSGADIVGDDPLGATQRITRRSQAAWSTVRDLNAELSTFIGVMPAGQALAIITF 120
+ +D +GDDP+ A + AA+ L + G +P A+ +
Sbjct 87 GSLNP--RSSDALGDDPVAAYREAVAGLLAAFRQPGVLEQVVEVPAGTVPGIAAVHLRIV 144
Query 121 STVVHGWDLAVATGQAGELPEHLAEAAQQV-AAELVPVLRPRGLFAHDVDLAGEATPTQR 179
+VHGWDLA ATGQ + + L E AA+L + R FA V +A +A P R
Sbjct 145 EELVHGWDLARATGQEAKFDDALIEREIAFSAAKLADLPADRRPFAPPVSVAADAPPLDR 204
Query 180 LVALTGRKP 188
LVAL GR P
Sbjct 205 LVALLGRAP 213
>gi|226363750|ref|YP_002781532.1| hypothetical protein ROP_43400 [Rhodococcus opacus B4]
gi|226242239|dbj|BAH52587.1| hypothetical protein [Rhodococcus opacus B4]
Length=193
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/174 (35%), Positives = 85/174 (49%), Gaps = 6/174 (3%)
Query 17 LVSSIEADSYSSPTPCDRWDVRALLSHALASIDAFAAAVDGAPGPDMAQVFSGADIVGDD 76
L+ ++ D ++ TPC +DVR +L H +A+++ +G + V +G I D
Sbjct 21 LIDNVRQDQLTASTPCADFDVRTMLGHLVATVERARVIGEGGDPRTVPLVVTG--IPDDS 78
Query 77 PLGATQRITRRSQAAWSTVRDLNAELSTFIGVMPAGQALAIITFSTVVHGWDLAVATGQA 136
A + R W+ L+A ++ G +P A+ T+VHGWDLAVATGQ
Sbjct 79 YAAAYRSAADRMWPVWTDDGRLDATVTAPWGTVPGRAAIWGYINETLVHGWDLAVATGQP 138
Query 137 GELPEHLAEAAQQVAAELVPVLRPRG---LFAHDVDLAGEATPTQRLVALTGRK 187
E LAEA VA +P PRG FA VD A PT+RL +GRK
Sbjct 139 SETRPELAEAMLAVAQRAIPA-EPRGGHVPFADVVDPLPTAGPTERLANWSGRK 191
>gi|336461601|gb|EGO40467.1| TIGR03086 family protein [Mycobacterium avium subsp. paratuberculosis
S397]
Length=195
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/173 (35%), Positives = 82/173 (48%), Gaps = 10/173 (5%)
Query 17 LVSSIEADSYSSPTPCDRWDVRALLSHALASIDAFAAAVDGAPGPDMAQVFSGADIVGDD 76
++ I AD S PTPC ++DV L H L S++A GA PD A GD
Sbjct 30 VLHPIAADDMSRPTPCAQFDVTRLTDHLLKSLEALGGMA-GADVPDHADS-------GDS 81
Query 77 PLGATQRITRRSQAAWSTVRDLNAELSTFIGVMPAGQALAIITFSTVVHGWDLAVATGQA 136
+ R + AW R L+ +S G MPA A AI+ +VH WD A A G+
Sbjct 82 VERQVIAVARPALDAWRQ-RGLDGTVSFGGGEMPARNACAILALELLVHAWDYARAVGRD 140
Query 137 GELPEHLAEAAQQVAAELV-PVLRPRGLFAHDVDLAGEATPTQRLVALTGRKP 188
PE LAE +A ++ P +R + F V++ +A +LVA TGR P
Sbjct 141 VRAPEPLAEYVLGLAHRVIRPEVRGQAGFDDPVEVPADADALTKLVAFTGRNP 193
>gi|297197037|ref|ZP_06914434.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
gi|197715691|gb|EDY59725.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
Length=197
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/174 (32%), Positives = 76/174 (44%), Gaps = 2/174 (1%)
Query 18 VSSIEADSYSSPTPCDRWDVRALLSHALASIDAFAAAVDGAPGPDMAQVFSGADIVGDDP 77
V ++ A + PTPC+ W V + HA+ FAAA+ G GPD ++ G DP
Sbjct 20 VGAVPAAGWHLPTPCESWSVAQVFQHAVGDQIGFAAALTGEAGPDFNPFDPSGEMEGVDP 79
Query 78 LGATQRITRRSQAAWSTVRDLNAELSTFI--GVMPAGQALAIITFSTVVHGWDLAVATGQ 135
+ RS AW+ V E+ T + M A VH WD+A+ATG+
Sbjct 80 GAFLEDALARSAKAWAGVDRDAVEVPTPVPPHTMSPWSGSAACGLDAAVHAWDIALATGR 139
Query 136 AGELPEHLAEAAQQVAAELVPVLRPRGLFAHDVDLAGEATPTQRLVALTGRKPR 189
L LA +VA E+V LRP G +A + L+ GR PR
Sbjct 140 QSPLTPELARPLLKVAREIVEPLRPYGAYAAALAPEQGDDDVALLLRYLGRDPR 193
>gi|41406348|ref|NP_959184.1| hypothetical protein MAP0250 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41394696|gb|AAS02567.1| hypothetical protein MAP_0250 [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=195
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/173 (35%), Positives = 82/173 (48%), Gaps = 10/173 (5%)
Query 17 LVSSIEADSYSSPTPCDRWDVRALLSHALASIDAFAAAVDGAPGPDMAQVFSGADIVGDD 76
++ I AD S PTPC ++DV L H L S++A GA PD A GD
Sbjct 30 VLHPIAADDMSRPTPCAQFDVTRLTDHLLKSLEALGGMA-GADVPDHADS-------GDS 81
Query 77 PLGATQRITRRSQAAWSTVRDLNAELSTFIGVMPAGQALAIITFSTVVHGWDLAVATGQA 136
+ R + AW R L+ +S G MPA A AI+ +VH WD A A G+
Sbjct 82 VERQVIAVARPALDAWRQ-RGLDGTVSFGGGEMPARNACAILALELLVHAWDYARAVGRD 140
Query 137 GELPEHLAEAAQQVAAELV-PVLRPRGLFAHDVDLAGEATPTQRLVALTGRKP 188
PE LAE +A ++ P +R + F V++ +A +LVA TGR P
Sbjct 141 VRAPEPLAEYVLGLAHRVIRPEVRGQAGFDDPVEVPADADALTKLVAFTGRNP 193
>gi|312194755|ref|YP_004014816.1| hypothetical protein FraEuI1c_0868 [Frankia sp. EuI1c]
gi|311226091|gb|ADP78946.1| hypothetical protein FraEuI1c_0868 [Frankia sp. EuI1c]
Length=190
Score = 75.1 bits (183), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/190 (32%), Positives = 84/190 (45%), Gaps = 2/190 (1%)
Query 1 MDLYSNLVEAEQRLVALVSSIEADSYSSPTPCDRWDVRALLSHALASI-DAFAAAVDGAP 59
M+++ L A ++ ++ D + TPC +WDVR LL+H + ++ A D AP
Sbjct 1 MEIFDALDGAVTSTAGIIKTVRPDQLDATTPCTQWDVRTLLNHLVGTLWLGEALFTDSAP 60
Query 60 -GPDMAQVFSGADIVGDDPLGATQRITRRSQAAWSTVRDLNAELSTFIGVMPAGQALAII 118
P G D+VGDDP A + AA L +T +G MP +
Sbjct 61 RHPMPPGGLPGTDLVGDDPATAYATASAALLAAARVGDTLTRLHTTPLGDMPGPALAGLT 120
Query 119 TFSTVVHGWDLAVATGQAGELPEHLAEAAQQVAAELVPVLRPRGLFAHDVDLAGEATPTQ 178
T +VHGWDLA ATGQ L E LA A + + + +A A T
Sbjct 121 TLDILVHGWDLATATGQPTVLDEDLASHVLAFAGQAITDDFRGTAIGPALPVAATAPVTD 180
Query 179 RLVALTGRKP 188
RLV GR+P
Sbjct 181 RLVGFLGRQP 190
>gi|254773305|ref|ZP_05214821.1| hypothetical protein MaviaA2_01286 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=191
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/173 (34%), Positives = 81/173 (47%), Gaps = 10/173 (5%)
Query 17 LVSSIEADSYSSPTPCDRWDVRALLSHALASIDAFAAAVDGAPGPDMAQVFSGADIVGDD 76
++ I AD PTPC ++DV L H L S++A G G D AD V
Sbjct 26 VLHPIAADDMPRPTPCAQFDVTRLTDHLLKSLEALG----GMAGADFPDHADSADSVERR 81
Query 77 PLGATQRITRRSQAAWSTVRDLNAELSTFIGVMPAGQALAIITFSTVVHGWDLAVATGQA 136
+ + R + AW R L+ +S G MPA A AI+ +VH WD A A G+
Sbjct 82 VIA----VARPALDAWRQ-RGLDGTVSFGGGEMPARNACAILALELLVHAWDYARAVGRD 136
Query 137 GELPEHLAEAAQQVAAELV-PVLRPRGLFAHDVDLAGEATPTQRLVALTGRKP 188
PE LAE +A ++ P +R + F V++ +A +LVA TGR P
Sbjct 137 ARAPEPLAEYVLGLAHRVIRPEVRGQAGFDDPVEVPADADALTKLVAFTGRNP 189
>gi|324997761|ref|ZP_08118873.1| hypothetical protein PseP1_03295 [Pseudonocardia sp. P1]
Length=199
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/177 (37%), Positives = 85/177 (49%), Gaps = 10/177 (5%)
Query 17 LVSSIEADSYSSPTPCDRWDVRALLSHALASIDAFAAAVDGAPGPDMAQVFSGADIVGDD 76
L +++ D + PTPCD +DVR LL+H + ++ AA G P A + S + V D
Sbjct 26 LAAAVPEDRMAGPTPCDEFDVRTLLAHLVTTVRRPAAIAAGT-DPLAAPLVS--EDVLDA 82
Query 77 PLGATQRITRRSQAAWS---TVRDLNAELSTFIGVMPAGQALAIITFSTVVHGWDLAVAT 133
P A AWS V L+ + G +P AL + T+VHGWDLAVAT
Sbjct 83 PADAYVAEAAALHGAWSGPDAVELLDRTVRMPFGEVPVRVALWVYVNETLVHGWDLAVAT 142
Query 134 GQAGELPEHLAEAAQQVAAELVPVLRPRG---LFAHDVDLAGEATPTQRLVALTGRK 187
GQ E LA A +VA +P PRG F V A A PT++L GR+
Sbjct 143 GQPVEADPALATTALEVARRFLPA-EPRGGPVPFGPVVTPAPGAGPTEQLANWAGRR 198
>gi|111219853|ref|YP_710647.1| hypothetical protein FRAAL0359 [Frankia alni ACN14a]
gi|111147385|emb|CAJ59035.1| hypothetical protein FRAAL0359 [Frankia alni ACN14a]
Length=244
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/185 (34%), Positives = 85/185 (46%), Gaps = 17/185 (9%)
Query 18 VSSIEADSYSSPTPCDRWDVRALLSHALASIDAFAAAVDGAPGPDMAQVFSGADIVGDDP 77
V ++ S+++PTPC +WDVRAL++H + G D+ F G D +GDDP
Sbjct 24 VRAVPPGSWAAPTPCGQWDVRALVNHLTVEHLWVPPLLAGLTRGDIGTRFDG-DQLGDDP 82
Query 78 LGATQRIT-RRSQAAWSTVRDLNAELSTF-IGVMPAGQALAIITFSTVVHGWDLAVATGQ 135
GA +T RRS+ AW D A L G PA + +T ++HGWDLA A
Sbjct 83 -GARWTVTARRSRDAWDRP-DAWASLPMLSFGPTPADEYAFQLTADLLLHGWDLARAIDL 140
Query 136 AGELP------------EHLAEAAQQVAAELVPVLRPRGLFAHDVDLAGEATPTQRLVAL 183
+G LP L + R G+FA V + +A RL+AL
Sbjct 141 SGRLPGDTTSARTVGNNRELVHWVHDSLRRQIDAWRVVGIFATPVPVPDDADEWTRLIAL 200
Query 184 TGRKP 188
TGR P
Sbjct 201 TGRSP 205
>gi|118462650|ref|YP_879539.1| hypothetical protein MAV_0248 [Mycobacterium avium 104]
gi|118163937|gb|ABK64834.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=198
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/173 (34%), Positives = 81/173 (47%), Gaps = 10/173 (5%)
Query 17 LVSSIEADSYSSPTPCDRWDVRALLSHALASIDAFAAAVDGAPGPDMAQVFSGADIVGDD 76
++ I AD PTPC ++DV L H L S++A G G D AD V
Sbjct 33 VLHPIAADDMPRPTPCAQFDVTRLTDHLLKSLEALG----GMAGADFPDHADSADSVERR 88
Query 77 PLGATQRITRRSQAAWSTVRDLNAELSTFIGVMPAGQALAIITFSTVVHGWDLAVATGQA 136
+ + R + AW R L+ +S G MPA A AI+ +VH WD A A G+
Sbjct 89 VIA----VARPALDAWRQ-RGLDGTVSFGGGEMPARNACAILALELLVHAWDYARAVGRD 143
Query 137 GELPEHLAEAAQQVAAELV-PVLRPRGLFAHDVDLAGEATPTQRLVALTGRKP 188
PE LAE +A ++ P +R + F V++ +A +LVA TGR P
Sbjct 144 ARAPEPLAEYVLGLAHRVIRPEVRGQAGFDDPVEVPADADALTKLVAFTGRNP 196
>gi|294630269|ref|ZP_06708829.1| conserved hypothetical protein [Streptomyces sp. e14]
gi|292833602|gb|EFF91951.1| conserved hypothetical protein [Streptomyces sp. e14]
Length=192
Score = 74.3 bits (181), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/156 (34%), Positives = 77/156 (50%), Gaps = 3/156 (1%)
Query 7 LVEAEQRLVALVSSIEADSYSSPTPCDRWDVRALLSHALASIDAFAAAVDGAPGPDMAQV 66
L+ A +L LV ++ TPC +D+RALL H + ++ A +G G D+A
Sbjct 11 LLSALDQLERLVGRLDTARLDRETPCAEYDLRALLGHTVGAVHRIAYVGEGGRGLDVAA- 69
Query 67 FSGADIVGDDPLGATQRITRRSQAAWSTVRDLNAELSTFIGVMPAGQALAIITFSTVVHG 126
+ I D GA R RR AAW+ L+ E+ G++P AL+ V H
Sbjct 70 -AAGRIADTDWGGAVCRAHRRLAAAWADEAKLDREVEVPWGLVPGRIALSGYVMEVVTHT 128
Query 127 WDLAVATGQAGELPEHLAEAAQQVAAELVPVLRPRG 162
WD+A A EL E L++AA +A +++P PRG
Sbjct 129 WDIAQVIDPAAELDERLSQAALDIAQKVLPP-EPRG 163
>gi|111019625|ref|YP_702597.1| hypothetical protein RHA1_ro02634 [Rhodococcus jostii RHA1]
gi|110819155|gb|ABG94439.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=204
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/187 (32%), Positives = 84/187 (45%), Gaps = 4/187 (2%)
Query 4 YSNLVEAEQRLVALVSSIEADSYSSPTPCDRWDVRALLSHALASIDAFAAAVDGAPGPDM 63
+ L A L +V ++AD ++ PTPC++W V +L HA AFAAA+ G PGP
Sbjct 16 WDVLNAAHAMLRTVVRGVDADGWTRPTPCEQWTVTQVLQHAAGDQLAFAAAITGGPGP-A 74
Query 64 AQVFSGADIVGDDPLGATQRITRRSQAAWSTVRDLNAELSTFI--GVMPAGQALAIITFS 121
F+ + + DPL + AW+ + +T + G +
Sbjct 75 ENPFAPSGTLDADPLEFLDTSLLAAADAWAGIDATAESAATPLPQGALAPRIGAGACALD 134
Query 122 TVVHGWDLAVATGQAGELPEHLAEAAQQVAAELVPVLRPRGLFAHDVDLAGEATPTQRLV 181
VH WD+AVATGQ L +A VA E+V LR G +A VD + L+
Sbjct 135 AAVHAWDIAVATGQPSPLSPLVATELLFVAREIVEPLRQYGAYAPVVD-GSDGDEVAGLL 193
Query 182 ALTGRKP 188
GR+P
Sbjct 194 RYLGRRP 200
>gi|284030442|ref|YP_003380373.1| hypothetical protein Kfla_2500 [Kribbella flavida DSM 17836]
gi|283809735|gb|ADB31574.1| hypothetical protein Kfla_2500 [Kribbella flavida DSM 17836]
Length=196
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/173 (35%), Positives = 81/173 (47%), Gaps = 12/173 (6%)
Query 21 IEADSYSSPTPCDRWDVRALLSHALASIDAFAAAVDGAPGPDMAQVFSGADIVGDDPLGA 80
+ D PTPC +W + LL+H +A FAA V PG +++ P A
Sbjct 22 VRPDQLDLPTPCTQWSLGELLAHQVAENRGFAANVINPPGAVNPEIWQPGR-----PETA 76
Query 81 TQRITRRSQAAWSTVR--DLNA--ELSTFIGVMPAGQALAIITFSTVVHGWDLAVATGQA 136
+ R DL A E+ F GV PA A+A+ + H WD+A A G A
Sbjct 77 LEDFAESVNLVTGAFRIADLEAPVEVREF-GVFPARVAIAMHFVDYLAHSWDIARAIGLA 135
Query 137 GELPEHLAEAAQQVAAELVPVLRPRG-LFAHDVDLAGEATPTQRLVALTGRKP 188
+P LAEAA Q AA L+P RP G FA V +A + + + + LTGR P
Sbjct 136 DPMPPRLAEAAIQYAA-LIPADRPDGSAFAPVVAIAEDTSANDKFLGLTGRDP 187
>gi|291301022|ref|YP_003512300.1| hypothetical protein Snas_3545 [Stackebrandtia nassauensis DSM
44728]
gi|290570242|gb|ADD43207.1| hypothetical protein Snas_3545 [Stackebrandtia nassauensis DSM
44728]
Length=197
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/190 (32%), Positives = 82/190 (44%), Gaps = 5/190 (2%)
Query 1 MDLYSNLVEAEQRLVALVSSIEADSYSSPTPCDRWDVRALLSHALASIDAFAAAVDGAPG 60
D L A ++ A + ++ AD PTPC ++VR LL H LA I A A G
Sbjct 11 FDPRPRLATALDQMQAQIEAVGADDLDRPTPCGDYNVRMLLGHVLAVIRKLAVA---GRG 67
Query 61 PDMAQVFSGADIVGDDPLGATQRITRRSQAAWSTVRDLNAELSTFIGVMPAGQALAIITF 120
D +QV AD + + A ++ WS L + + MP L T
Sbjct 68 GDASQVTDPADDITEGWTDAIRQARADLDQVWSADTSLERDCTLPWATMPGRDVLDTYTH 127
Query 121 STVVHGWDLAVATGQAGELPEHLAEAAQQVAAELVP--VLRPRGLFAHDVDLAGEATPTQ 178
VH WDLA ATG+ +L LA+ A + + VP G F + +A +A
Sbjct 128 EFTVHAWDLARATGRVDDLDPVLAKMALEWFSRNVPEDARSEDGAFGPAIAVADDADVFT 187
Query 179 RLVALTGRKP 188
+L A GRKP
Sbjct 188 KLAAYVGRKP 197
>gi|330466575|ref|YP_004404318.1| hypothetical protein VAB18032_13020 [Verrucosispora maris AB-18-032]
gi|328809546|gb|AEB43718.1| hypothetical protein VAB18032_13020 [Verrucosispora maris AB-18-032]
Length=191
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/191 (34%), Positives = 91/191 (48%), Gaps = 7/191 (3%)
Query 1 MDLYSNLVEAEQRLVALVSSIEADSYSSPTPCDRWDVRALLSHALASIDAFAAAVDGAPG 60
MDL + V + +S+PTPC WDVR L++H + A + G
Sbjct 1 MDLLETYRRSVAEFADRVPLVAPGQWSAPTPCADWDVRTLVNHVVGEDRWSVALLAGRTI 60
Query 61 PDMAQVFSGADIVGDDPLGATQRITRRSQAAWST--VRDLNAELSTFIGVMPAGQALAII 118
++ + G D +G DP+ A + +++ A + VRD LS G PA + L +
Sbjct 61 AEVGDRYDG-DQLGADPVEAARDAAAQAELAATRPGVRDATVHLSA--GDTPAEEYLRQL 117
Query 119 TFSTVVHGWDLAVATGQAGELP-EHLAEAAQQVAAELVPVLRPRGLFAHDVDLAGEATPT 177
+VHGWDLAVA G +L E +AE A+ A E V R GL +VD+ EA
Sbjct 118 IAEHLVHGWDLAVAIGADPKLDAEAVAECARWFAGE-VDAYRNNGLVRAEVDVPTEADEQ 176
Query 178 QRLVALTGRKP 188
RL+A GR P
Sbjct 177 DRLIAAFGRDP 187
>gi|254822475|ref|ZP_05227476.1| hypothetical protein MintA_21251 [Mycobacterium intracellulare
ATCC 13950]
Length=194
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/176 (35%), Positives = 82/176 (47%), Gaps = 11/176 (6%)
Query 14 LVALVSSIEADSYSSPTPCDRWDVRALLSHALASIDAFAAAVDGAPGPDMAQVFSGADIV 73
L ++ +I AD S PTPC +DV L H L SI A VD A P+ A+
Sbjct 27 LQRVLHTIAADDLSRPTPCADFDVAQLTGHLLNSIKALGGMVD-ADVPEPAE-------- 77
Query 74 GDDPLGATQRITRRSQAAWSTVRDLNAELSTFIGVMPAGQALAIITFSTVVHGWDLAVAT 133
GD R + AW L + G MPA A A+++ +VH WD A AT
Sbjct 78 GDSVERQVVAAARPALDAWHR-HGLGGTVPFGKGEMPAKSACAVLSIEFLVHAWDYAAAT 136
Query 134 GQAGELPEHLAEAAQQVAAELV-PVLRPRGLFAHDVDLAGEATPTQRLVALTGRKP 188
+ + PE L+E +A ++ P LR F VD+ +A ++LVA TGR P
Sbjct 137 KREVDAPEPLSEYVLGLARHIIRPELRGGAGFDDPVDVPEDAGALEQLVAFTGRNP 192
>gi|297156190|gb|ADI05902.1| hypothetical protein SBI_02781 [Streptomyces bingchenggensis
BCW-1]
Length=196
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/171 (31%), Positives = 78/171 (46%), Gaps = 2/171 (1%)
Query 18 VSSIEADSYSSPTPCDRWDVRALLSH-ALASIDAFAAAVDGAPGPDMAQVFSGADIVGDD 76
V +I D + PTPC W VR L++H A+ + +G + G D++GDD
Sbjct 26 VHAIRPDQWDEPTPCSEWTVRDLVNHLAVEQMWVPPLVREGRTIAEQGDSLEG-DLLGDD 84
Query 77 PLGATQRITRRSQAAWSTVRDLNAELSTFIGVMPAGQALAIITFSTVVHGWDLAVATGQA 136
P+ A ++ A++ L + G PA + A IT VH WDLA A G
Sbjct 85 PVAAWDEAATAAREAFTAPGALERTVELSFGETPAAEYCAEITIDAAVHAWDLARAIGAD 144
Query 137 GELPEHLAEAAQQVAAELVPVLRPRGLFAHDVDLAGEATPTQRLVALTGRK 187
+P+ L + + + A L G+FA V+ A RL+AL GR+
Sbjct 145 ERIPKPLVDFSVRAVAPYAAELEKSGMFAAAVEPPSGADAQTRLLALLGRE 195
>gi|345010171|ref|YP_004812525.1| hypothetical protein Strvi_2525 [Streptomyces violaceusniger
Tu 4113]
gi|344036520|gb|AEM82245.1| Conserved hypothetical protein CHP03086 [Streptomyces violaceusniger
Tu 4113]
Length=191
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/187 (30%), Positives = 83/187 (45%), Gaps = 2/187 (1%)
Query 3 LYSNLVEAEQRLVALVSSIEADSYSSPTPCDRWDVRALLSH-ALASIDAFAAAVDGAPGP 61
L + EA V +I + PTPC W VR L++H A+ + +GA
Sbjct 6 LLARHCEALDLFTERVHAIRPHQWDDPTPCTEWTVRDLVNHLAVEQMWVPPLVREGASVA 65
Query 62 DMAQVFSGADIVGDDPLGATQRITRRSQAAWSTVRDLNAELSTFIGVMPAGQALAIITFS 121
D + G D++GDDP+ + ++ A+ L+ + G PA A +T
Sbjct 66 DQSNALEG-DLLGDDPVATWDVVVAAARDAFREPGALDRMVELSYGESPATHYCAQMTAD 124
Query 122 TVVHGWDLAVATGQAGELPEHLAEAAQQVAAELVPVLRPRGLFAHDVDLAGEATPTQRLV 181
VH WDL+ A G +P+ L + + + A L GLFA V+ A RL+
Sbjct 125 AAVHAWDLSRAIGAEERIPKPLVDFSVREVAPYAADLEESGLFAAPVEPPPGADAQTRLL 184
Query 182 ALTGRKP 188
AL GR+P
Sbjct 185 ALLGREP 191
>gi|284033714|ref|YP_003383645.1| hypothetical protein Kfla_5842 [Kribbella flavida DSM 17836]
gi|283813007|gb|ADB34846.1| hypothetical protein Kfla_5842 [Kribbella flavida DSM 17836]
Length=196
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/193 (32%), Positives = 85/193 (45%), Gaps = 9/193 (4%)
Query 1 MDLYSNLVEAEQRLVALVSSIEADSYSSPTPCDRWDVRALLSHALASIDAFAAAVDGAPG 60
MD+ A L +V + A+ PTPC W VR LL H ++ + FAAA
Sbjct 1 MDIRDLDRRAGAVLGEVVMQVRAEHLWFPTPCPDWTVRGLLRHIVSENEGFAAAAINGSA 60
Query 61 PDMAQVFSGADIVGDDPLGATQRITRRSQAAWST--VRDLNAELSTFIGVMPAGQALAII 118
P Q ++G + GD+P GA +R + A++ D E+ F G P AL
Sbjct 61 P--VQTWTGGRL-GDNPAGAYRRSNVKVADAFADGGALDRAMEVREF-GTFPRRVALTFH 116
Query 119 TFSTVVHGWDLAVATGQAGELPEHLAEAAQQVAAELVPVLRPRG---LFAHDVDLAGEAT 175
+VH WDLA A + P + E A +A + RG F V + G+A+
Sbjct 117 QLDCIVHAWDLARAIDAPYDPPAEMVEMALGLARRIPDTDASRGPGAAFERAVKVPGDAS 176
Query 176 PTQRLVALTGRKP 188
L+AL GR P
Sbjct 177 DLDTLLALLGRNP 189
>gi|297560803|ref|YP_003679777.1| hypothetical protein Ndas_1843 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296845251|gb|ADH67271.1| conserved hypothetical protein [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length=186
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/172 (30%), Positives = 81/172 (48%), Gaps = 5/172 (2%)
Query 18 VSSIEADSYSSPTPCDRWDVRALLSHALASIDAFAAAVDGAPGPDMAQVFSGADIVGDDP 77
V ++ ++ PTPC WDV L++H + GA ++ G D +G++P
Sbjct 19 VREVKLTDWALPTPCADWDVHDLVNHLTTEQLWVPLLLGGARVEEVGDRLDG-DNLGEEP 77
Query 78 LGATQRITRRSQAAWSTVRDLNAELSTFIGVMPAGQALAIITFSTVVHGWDLAVATGQAG 137
+ + +R ++ AW L + + G PA L +TF VH WDLA A G
Sbjct 78 ITTWEVASREARTAWLAPSSLESTVHLSFGDAPAELYLWQMTFDLTVHAWDLARALGTDE 137
Query 138 EL-PEHLAEAAQQVAAELVPVLRPRGLFAHDVDLAGEATPTQRLVALTGRKP 188
L P+ + E ++ + L P +F V++ +A+P RL+A TGR P
Sbjct 138 RLDPDLVKEVHAWLSDQ---DLGPGPMFGAPVEVGPDASPQDRLIARTGRTP 186
>gi|271966734|ref|YP_003340930.1| hypothetical protein Sros_5427 [Streptosporangium roseum DSM
43021]
gi|270509909|gb|ACZ88187.1| hypothetical protein Sros_5427 [Streptosporangium roseum DSM
43021]
Length=198
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/158 (32%), Positives = 71/158 (45%), Gaps = 3/158 (1%)
Query 4 YSNLVEAEQRLVALVSSIEADSYSSPTPCDRWDVRALLSHALASIDAFAAAVDGAPGPDM 63
++ L +A + L V + A + PTPC W+V +L HA FAA + G PGP
Sbjct 9 WTVLNDAHEALRTAVRGVAAGDWDRPTPCAGWNVTQVLQHAAGDQLGFAAFITGGPGPSE 68
Query 64 AQVFSGADIVGDDPLGATQRITRRSQAAWSTVRDLNAELSTFI--GVMPAGQALAIITFS 121
F+ + + P + + S AW+TV + E++ + G + A
Sbjct 69 -DPFAPSGTLSASPSAVAEEAMKASADAWATVGKDDQEVAVPVPPGKLTASLGAGACALD 127
Query 122 TVVHGWDLAVATGQAGELPEHLAEAAQQVAAELVPVLR 159
VH WD+AVATGQ L LA VA +V LR
Sbjct 128 AAVHAWDIAVATGQPSPLTPALARELMPVATAIVEPLR 165
>gi|333992695|ref|YP_004525309.1| hypothetical protein JDM601_4055 [Mycobacterium sp. JDM601]
gi|333488663|gb|AEF38055.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=166
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/175 (33%), Positives = 79/175 (46%), Gaps = 11/175 (6%)
Query 14 LVALVSSIEADSYSSPTPCDRWDVRALLSHALASIDAFAAAVDGAPGPDMAQVFSGADIV 73
LV ++ I +D S+ TPC +DV L H L SI AA GA PD
Sbjct 2 LVQVLHHISSDELSNQTPCSEFDVAQLTEHLLGSISMLGAAA-GAEFPDRDAT------- 53
Query 74 GDDPLGATQRITRRSQAAWSTVRDLNAELSTFIGVMPAGQALAIITFSTVVHGWDLAVAT 133
+ P R + AW R L+ ++ +PA I+ +VH WD A A
Sbjct 54 -ESPERQVIAAARPALDAWHG-RGLDGTVAIGPNQLPATMVAGILAVEFLVHAWDYATAI 111
Query 134 GQAGELPEHLAEAAQQVAAELV-PVLRPRGLFAHDVDLAGEATPTQRLVALTGRK 187
G+ ++ E LAE +A ++ P R R F V++AG A QRL+A TGR
Sbjct 112 GRTVQVAEPLAEYVLGLAQAIITPEGRVRAGFDQPVEVAGTAPALQRLIAFTGRS 166
>gi|345000316|ref|YP_004803170.1| hypothetical protein SACTE_2747 [Streptomyces sp. SirexAA-E]
gi|344315942|gb|AEN10630.1| conserved hypothetical protein [Streptomyces sp. SirexAA-E]
Length=190
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/192 (33%), Positives = 84/192 (44%), Gaps = 13/192 (6%)
Query 1 MDLYSNLVEAEQ-RLVALVSSIEADSYSSPTPCDRWDVRALLSHALASIDAFAAAVDGAP 59
M S L++A R +V +++ ++PTPC +DVRALL+H + F A P
Sbjct 1 MTKISELLDAASARTCPVVRAVDDAQLTAPTPCGEYDVRALLNHLFQVVTNFQALAARGP 60
Query 60 GPDMAQVFSGADIVGDDPLGATQRITRRSQAAWSTVRDLNAELSTFIGVM--PAGQALAI 117
+ D+V D G + T R AW D +G M PA +
Sbjct 61 ----VEFGETPDVVTGDWRGRFEAETARLARAW----DAPGAEEGAVGAMGLPARTVGMM 112
Query 118 ITFSTVVHGWDLAVATGQAGEL-PEHLAEAAQQVAAELVPVLRPRGLFAHDVDLAGEATP 176
+ VVHGWDL ATGQ E P LAE + A L P R +F + AT
Sbjct 113 VLGDLVVHGWDLGRATGQDFEADPVVLAELGPEFAG-LAPKAREMKVFGEPFPVPAGATA 171
Query 177 TQRLVALTGRKP 188
+RLV TGR P
Sbjct 172 LERLVGDTGRDP 183
>gi|302541611|ref|ZP_07293953.1| conserved hypothetical protein [Streptomyces hygroscopicus ATCC
53653]
gi|302459229|gb|EFL22322.1| conserved hypothetical protein [Streptomyces himastatinicus ATCC
53653]
Length=199
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/180 (32%), Positives = 81/180 (45%), Gaps = 2/180 (1%)
Query 9 EAEQRLVALVSSIEADSYSSPTPCDRWDVRALLSH-ALASIDAFAAAVDGAPGPDMAQVF 67
EA V ++ D + +PTPC W VR L++H A+ + A +GA + V
Sbjct 20 EALDLFTERVHAVRPDQWDAPTPCTEWTVRDLVNHLAVEQMWVPALLREGASAGGESDVL 79
Query 68 SGADIVGDDPLGATQRITRRSQAAWSTVRDLNAELSTFIGVMPAGQALAIITFSTVVHGW 127
SG D +G+DP+ ++ A+ L + G PA + A +T VH W
Sbjct 80 SG-DQLGEDPVATWDAAAAVARTAFQEPGALERTVDLSYGASPATEYCAQMTADATVHAW 138
Query 128 DLAVATGQAGELPEHLAEAAQQVAAELVPVLRPRGLFAHDVDLAGEATPTQRLVALTGRK 187
DLA A G LP L + + + A L GLFA VD A +L+AL GR+
Sbjct 139 DLARAIGADERLPRPLVDFSVREVAPYAADLEKSGLFAAPVDPPPNADAQTKLLALLGRE 198
>gi|256378429|ref|YP_003102089.1| hypothetical protein Amir_4394 [Actinosynnema mirum DSM 43827]
gi|255922732|gb|ACU38243.1| hypothetical protein Amir_4394 [Actinosynnema mirum DSM 43827]
Length=186
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/192 (32%), Positives = 83/192 (44%), Gaps = 12/192 (6%)
Query 1 MDLYSNLVEAEQRLVALVSSIEADSYSSPTPCDRWDVRALLSHALASIDAFAAAVDGAPG 60
M +L +V+ I D SPTPC +DVRAL +H L + A++GA
Sbjct 1 MSTAQHLAATNAAFAKVVAGIRPDQLDSPTPCAEFDVRALGAHVLR----YGPALEGA-- 54
Query 61 PDMAQVFSGADIVGDDPLGATQRI-TRRSQAAWSTVRDLNAELSTFIGV--MPAGQALAI 117
++ S GD P R R +AW++ ++T G +PA +
Sbjct 55 --ASKGASTPAQPGDGPWADEVRAQVERCTSAWASPEAWEG-VTTMGGPDPLPAPLIGNM 111
Query 118 ITFSTVVHGWDLAVATGQAGELPEHLAEAAQQVAAELVPVLRPRGLFAHDVDLAGEATPT 177
+ VVH WDLA ATGQ EL L A P+ R RG F + + +A
Sbjct 112 VLCEYVVHAWDLARATGQEVELDPDLVAAVHAELVRTAPMGRERGAFGPEAPVPHDAPVL 171
Query 178 QRLVALTGRKPR 189
RL+ L GR PR
Sbjct 172 DRLLGLAGRDPR 183
>gi|158318360|ref|YP_001510868.1| hypothetical protein Franean1_6625 [Frankia sp. EAN1pec]
gi|158113765|gb|ABW15962.1| conserved hypothetical protein [Frankia sp. EAN1pec]
Length=189
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/179 (32%), Positives = 81/179 (46%), Gaps = 19/179 (10%)
Query 16 ALVSSIEADSYSSPTPCDRWDVRALLSHALASIDAFAAAVDGAPGPDMAQVFSGADIVGD 75
A+V I D ++PTPC +WDVR L+H + + FAA + A AD +G
Sbjct 17 AIVKGITDDQLAAPTPCPKWDVRTELNHLVGGMRIFAAELTTTD----AGADHDADWLGT 72
Query 76 DPLGATQRITRRSQAAWSTVRDLNAELSTFIGVMPAGQALAIITFSTVVHGWDLAVATGQ 135
P A +AAW L+ + G +P A I +VHG DLA+ATGQ
Sbjct 73 GPQAAFATAADLDRAAWHRRNALDTTVRLGFGAVPGPMAALIHLTEVLVHGADLAIATGQ 132
Query 136 AGELPEHLAEAAQQVAAELVP--------VLRPRGLFAHDVDLAGEATPTQRLVALTGR 186
EHL + + EL+ V R G+F V ++ +A ++L+A GR
Sbjct 133 -----EHLVD--ECACGELLTTTHGMDFDVFRRPGMFGPAVSVSADAPAHRQLLAFLGR 184
>gi|134101454|ref|YP_001107115.1| hypothetical protein SACE_4924 [Saccharopolyspora erythraea NRRL
2338]
gi|291008101|ref|ZP_06566074.1| hypothetical protein SeryN2_26571 [Saccharopolyspora erythraea
NRRL 2338]
gi|133914077|emb|CAM04190.1| hypothetical protein SACE_4924 [Saccharopolyspora erythraea NRRL
2338]
Length=196
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/192 (32%), Positives = 89/192 (47%), Gaps = 7/192 (3%)
Query 1 MDLYSNLVEAEQRLVALVSSIEADSYSSPTPCDRWDVRALLSHALASIDAFAAAVDGAPG 60
MDL ++ A + L++++ + PTPC W V LL H ++ FAAA G
Sbjct 1 MDLRASNRRALALVSELIAALRPEQLGLPTPCSAWTVGDLLRHMISQNKRFAAAARGEDA 60
Query 61 PDMAQVFSGADIVGDDPLGATQRITRRSQAAWSTVRDLNAE---LSTFIGVMPAGQALAI 117
D A G ++ GDDP AT R + A V D+ L G +PA A++
Sbjct 61 -DAACPLDGGEL-GDDP-AATYRDSADLAVAAYLVEDIAGRRMVLEELPGPLPALVAISF 117
Query 118 ITFSTVVHGWDLAVATGQAGELPEHLAEAAQQVAAELVPVLR-PRGLFAHDVDLAGEATP 176
++VHGWD+A + G + P+ L+ AA + + + R P G F V+ A
Sbjct 118 HFTDSLVHGWDVARSIGVPFQPPDELSGAALGIGSRIPDGARGPGGAFGPAVEPVSSAGD 177
Query 177 TQRLVALTGRKP 188
RL+ L GR P
Sbjct 178 FDRLLCLVGRDP 189
>gi|342860029|ref|ZP_08716681.1| hypothetical protein MCOL_14160 [Mycobacterium colombiense CECT
3035]
gi|342132407|gb|EGT85636.1| hypothetical protein MCOL_14160 [Mycobacterium colombiense CECT
3035]
Length=194
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/176 (33%), Positives = 80/176 (46%), Gaps = 11/176 (6%)
Query 14 LVALVSSIEADSYSSPTPCDRWDVRALLSHALASIDAFAAAVDGAPGPDMAQVFSGADIV 73
L ++ +I AD S TPC ++DV AL H L SI A V GA P +
Sbjct 27 LQRVLHTIAADDLSRRTPCAQFDVSALTGHLLNSISALGGMV-GAQIPPREE-------- 77
Query 74 GDDPLGATQRITRRSQAAWSTVRDLNAELSTFIGVMPAGQALAIITFSTVVHGWDLAVAT 133
GD R + AW L+ + G MPA A I++ +VH WD A A
Sbjct 78 GDSVERQVIAAARPALDAWHR-HGLDGSVPFGKGEMPAKSACGILSIEFLVHAWDYAAAV 136
Query 134 GQAGELPEHLAEAAQQVAAELV-PVLRPRGLFAHDVDLAGEATPTQRLVALTGRKP 188
G PE L+E +A + + P LR + F V++ +A ++LVA TGR P
Sbjct 137 GHDIHAPEPLSEYVLGLARQTIRPELRGQAGFDDPVEVPADAGALEQLVAFTGRNP 192
>gi|169629516|ref|YP_001703165.1| hypothetical protein MAB_2430c [Mycobacterium abscessus ATCC
19977]
gi|169241483|emb|CAM62511.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=198
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/191 (33%), Positives = 86/191 (46%), Gaps = 3/191 (1%)
Query 1 MDLYSNLVEAEQRLVALVSSIEADSYSSPTPCDRWDVRALLSHALASIDAFAAAVDGAPG 60
M++ +L A + AL+ I + +PTPC VRAL++H + AF A A
Sbjct 1 MEIPFSLRPAASAVAALLPGISDSALDNPTPCTELTVRALVNHVMGLSLAFRYAAAPAEA 60
Query 61 PDMAQVFSGADIVGD-DPLGATQRITRRSQAAWSTVRDLNAELSTFI--GVMPAGQALAI 117
V SG D DP T R + R ++ E ++ I VMP Q +
Sbjct 61 AAAGFVSSGPSFTEDLDPQWRTSLPRRLADLVEVWERPVSWEGTSTIAGNVMPNHQVAMV 120
Query 118 ITFSTVVHGWDLAVATGQAGELPEHLAEAAQQVAAELVPVLRPRGLFAHDVDLAGEATPT 177
V+HGWDLAVATGQ ELPE +L GLF V +A +A
Sbjct 121 ALDELVLHGWDLAVATGQPFELPEGTDPGLFGFITDLASDGGIPGLFGPRVSVAPDAPRF 180
Query 178 QRLVALTGRKP 188
R++A++GR P
Sbjct 181 DRMLAMSGRDP 191
>gi|296166899|ref|ZP_06849316.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295897776|gb|EFG77365.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=197
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/176 (33%), Positives = 78/176 (45%), Gaps = 11/176 (6%)
Query 14 LVALVSSIEADSYSSPTPCDRWDVRALLSHALASIDAFAAAVDGAPGPDMAQVFSGADIV 73
L ++ I AD S PTPC +DV L H L SI A V GA P+
Sbjct 30 LQRVLHPIAADDLSRPTPCAEFDVAQLTDHLLKSITALGGMV-GAQIPERD--------A 80
Query 74 GDDPLGATQRITRRSQAAWSTVRDLNAELSTFIGVMPAGQALAIITFSTVVHGWDLAVAT 133
GD R + AW L+ + G MPA A A+++ +VH WD A A
Sbjct 81 GDSVEAQVVTAARPALDAWHR-HGLDGSVPFGKGEMPAKGACAVLSIEFLVHAWDYATAV 139
Query 134 GQAGELPEHLAEAAQQVAAELV-PVLRPRGLFAHDVDLAGEATPTQRLVALTGRKP 188
G P L+E +A +++ P R FA VD+ +A ++LVA +GR P
Sbjct 140 GHEINAPVPLSEYVLGLARQVIRPEFRGGAGFADPVDVPEDAGALEQLVAFSGRNP 195
>gi|300789626|ref|YP_003769917.1| hypothetical protein AMED_7807 [Amycolatopsis mediterranei U32]
gi|299799140|gb|ADJ49515.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
gi|340531283|gb|AEK46488.1| hypothetical protein RAM_40105 [Amycolatopsis mediterranei S699]
Length=179
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/176 (31%), Positives = 76/176 (44%), Gaps = 1/176 (0%)
Query 14 LVALVSSIEADSYSSPTPCDRWDVRALLSHALASIDAFAAAVDGAPGPDMAQVFSGADIV 73
+ A +I D ++ TPC +DVRAL++H L + A A P A S D+
Sbjct 1 MAAAARTITDDQLANKTPCTEYDVRALVNHLLFWGPSLAGAGRKESVPQPAAAESDVDLA 60
Query 74 GDDPLGATQRITRRSQAAWSTVRDLNAELSTFI-GVMPAGQALAIITFSTVVHGWDLAVA 132
D G + ++W+ E S +PA +I VHGWDLAVA
Sbjct 61 AGDWRGRLLALLDDITSSWAQPSAWEGETSMGTPHTLPAPVMGDMIVGELAVHGWDLAVA 120
Query 133 TGQAGELPEHLAEAAQQVAAELVPVLRPRGLFAHDVDLAGEATPTQRLVALTGRKP 188
TGQ ELP L V R G++ +V + +A R++ LTGR P
Sbjct 121 TGQRLELPADLLAHLHDTVVAGVEQGREMGMYGPEVAVPADAPTLDRIIGLTGRDP 176
>gi|134100251|ref|YP_001105912.1| hypothetical protein SACE_3715 [Saccharopolyspora erythraea NRRL
2338]
gi|291006525|ref|ZP_06564498.1| hypothetical protein SeryN2_18561 [Saccharopolyspora erythraea
NRRL 2338]
gi|133912874|emb|CAM02987.1| hypothetical protein SACE_3715 [Saccharopolyspora erythraea NRRL
2338]
Length=197
Score = 67.4 bits (163), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/202 (33%), Positives = 96/202 (48%), Gaps = 24/202 (11%)
Query 1 MDLYSNLVEAEQRLVALVSSIEADSYSSPTPCDRWDVRALLSH--------ALASIDAFA 52
M ++L A ++L LV ++ S+PTPC + V LLSH LA+ F
Sbjct 1 MAARTDLQPATRQLAGLVRAVGDGQLSAPTPCRDYTVGDLLSHIDDLAMAFTLAAGKEFG 60
Query 53 AAVDGAPGPDMAQVFSGADIVGDDPLGATQRITRRSQAAWSTVRDLNA-ELSTFIGV--M 109
A+D AP PD +++ G+D +RI RR + R +A E T G +
Sbjct 61 EALDRAPSPDASRL--GSDW--------RERIPRRLEGLAQAWRRPDAWEGMTRAGGLDL 110
Query 110 PAGQALAIITFSTVVHGWDLAVATGQAGEL-PEHLAEAAQQVAAELVPVLRP--RGLFAH 166
P A ++ V+HGWDLA A+GQ ++ PE L + VAA P GLF
Sbjct 111 PGEIAGQVVVDELVLHGWDLARASGQPFDVDPELLRVCGEFVAAMSTPGQEASREGLFGP 170
Query 167 DVDLAGEATPTQRLVALTGRKP 188
V +AG+ +R++ + GR P
Sbjct 171 AVPVAGDRPELERVLGMAGRDP 192
>gi|108801947|ref|YP_642144.1| hypothetical protein Mmcs_4984 [Mycobacterium sp. MCS]
gi|119871099|ref|YP_941051.1| hypothetical protein Mkms_5072 [Mycobacterium sp. KMS]
gi|126437928|ref|YP_001073619.1| hypothetical protein Mjls_5365 [Mycobacterium sp. JLS]
gi|108772366|gb|ABG11088.1| conserved hypothetical protein [Mycobacterium sp. MCS]
gi|119697188|gb|ABL94261.1| conserved hypothetical protein [Mycobacterium sp. KMS]
gi|126237728|gb|ABO01129.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=194
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/179 (30%), Positives = 80/179 (45%), Gaps = 19/179 (10%)
Query 14 LVALVSSIEADSYSSPTPCDRWDVRALLSHALASIDAFAAAVDGAPGPDMAQVFSGADIV 73
L +V SI D TPC +DV L H + SI A +GA++
Sbjct 27 LHQVVRSIAEDDLGKQTPCSEFDVAGLTEHLVRSITILGGA-------------AGAEMP 73
Query 74 GDDPLGATQR----ITRRSQAAWSTVRDLNAELSTFIGVMPAGQALAIITFSTVVHGWDL 129
DP + +R R + AW R ++ + MPA + I++ +VH WD
Sbjct 74 ERDPSDSVERQVILAARPALDAWHR-RGIDGAVDVGGTTMPATVLVGILSLEFLVHAWDY 132
Query 130 AVATGQAGELPEHLAEAAQQVAAELV-PVLRPRGLFAHDVDLAGEATPTQRLVALTGRK 187
A A G P+ L++ +A ++V P R R F V++ +A P QRL+A TGR+
Sbjct 133 ATAIGHTVPAPDSLSDYVLAMAEKIVTPQGRARAGFDDPVEVPDDAPPLQRLLAFTGRR 191
>gi|226364559|ref|YP_002782341.1| hypothetical protein ROP_51490 [Rhodococcus opacus B4]
gi|226243048|dbj|BAH53396.1| hypothetical protein [Rhodococcus opacus B4]
Length=188
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/168 (32%), Positives = 70/168 (42%), Gaps = 12/168 (7%)
Query 26 YSSPTPCDRWDVRALLSHALASIDA----FAAAVDGAPGPDMAQVFSGADIVGDDPLGAT 81
+S+PTP WDV L+ H + A G PD+ + D
Sbjct 26 WSAPTPDREWDVTQLVRHVIEEQQWVPPLLAGKTVGEATPDIEPLHG-------DMRAEW 78
Query 82 QRITRRSQAAWSTVRDLNAELSTFIGVMPAGQALAIITFSTVVHGWDLAVATGQAGELPE 141
QR + + AWS+ D + G +P L T +H WDLAVATG L
Sbjct 79 QRYSDAAIRAWSST-DRQTHVHLSYGTVPLEPYLRQQTADVTIHAWDLAVATGSDDALDP 137
Query 142 HLAEAAQQVAAELVPVLRPRGLFAHDVDLAGEATPTQRLVALTGRKPR 189
L + +L GLFA VD+ G+A RL+ALTGR PR
Sbjct 138 QLVAGVWSDLDDQREMLSESGLFADPVDVPGDAPLQDRLIALTGRDPR 185
>gi|302548167|ref|ZP_07300509.1| basic proline-rich protein [Streptomyces hygroscopicus ATCC 53653]
gi|302465785|gb|EFL28878.1| basic proline-rich protein [Streptomyces himastatinicus ATCC
53653]
Length=237
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/136 (32%), Positives = 67/136 (50%), Gaps = 9/136 (6%)
Query 18 VSSIEADSYSSPTPCDRWDVRALLSHALASIDAFAAAVDGAPGPDMAQVFSGADIVGDDP 77
+ ++ +D +++PTPC WDVR L++H + A +DG D ++ D +G DP
Sbjct 61 LRTVRSDQWTAPTPCAEWDVRHLVNHMTRGNLNYIALLDGGSAADFLRL-RDEDALGGDP 119
Query 78 LGATQRITRRSQAAWSTVRDLNAELSTFIGVMPAGQALAIITFSTVVHGWDLAVA----- 132
+GA R R A+ L L +G + QALA+ T +++H WDLA A
Sbjct 120 VGAYTRSVRDCAEAFRRPGALQQILDYPLGPVTGDQALAVRTTDSLIHTWDLARALDAPE 179
Query 133 ---TGQAGELPEHLAE 145
G + +HLAE
Sbjct 180 GLEPGLVAWVEDHLAE 195
>gi|134100366|ref|YP_001106027.1| hypothetical protein SACE_3831 [Saccharopolyspora erythraea NRRL
2338]
gi|291007663|ref|ZP_06565636.1| hypothetical protein SeryN2_24319 [Saccharopolyspora erythraea
NRRL 2338]
gi|133912989|emb|CAM03102.1| hypothetical protein SACE_3831 [Saccharopolyspora erythraea NRRL
2338]
Length=195
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/172 (29%), Positives = 76/172 (45%), Gaps = 1/172 (0%)
Query 18 VSSIEADSYSSPTPCDRWDVRALLSHALASIDAFAAAVDGAPGPDMAQVFSGADIVGDDP 77
V +I D + + TPC +W VR L+ H ++ +DGA ++ F G D++G DP
Sbjct 18 VRAIGDDQWDNGTPCAQWTVRDLVQHLVSEQLWAPRLLDGATLEEVGDRFDG-DVLGADP 76
Query 78 LGATQRITRRSQAAWSTVRDLNAELSTFIGVMPAGQALAIITFSTVVHGWDLAVATGQAG 137
GA + +++ AW E+ GV+PA +T VH WDLA
Sbjct 77 KGAWTEASAQARQAWDRPGAATGEVHVTGGVIPAEDYGWQMTLDLTVHAWDLACGIRSDT 136
Query 138 ELPEHLAEAAQQVAAELVPVLRPRGLFAHDVDLAGEATPTQRLVALTGRKPR 189
L L + V V + G+F + + +A RL+A+ GR R
Sbjct 137 SLDPDLVAVVRTVFEPQVASWQDMGIFDPPLPVPDDADEQTRLLAMLGRDAR 188
>gi|290955159|ref|YP_003486341.1| hypothetical protein SCAB_5731 [Streptomyces scabiei 87.22]
gi|260644685|emb|CBG67770.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
Length=209
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/164 (32%), Positives = 73/164 (45%), Gaps = 2/164 (1%)
Query 4 YSNLVEAEQRLVALVSSIEADSYSSPTPCDRWDVRALLSHALASIDAFAAAVDGAPGPDM 63
+ L + + L V ++ AD + PTPC W V + HA+ FAAA+ G PGPD
Sbjct 10 WDVLDASHEALRTAVRAVPADGWDLPTPCGEWTVTQVFQHAVGDQIGFAAALTGEPGPDF 69
Query 64 AQVFSGADIVGDDPLGATQRITRRSQAAWSTVRDLNAELSTFIGV--MPAGQALAIITFS 121
++ G DP + R+ AW+ V AE+ + + A
Sbjct 70 DPFAPSGELEGADPAVLLEDALARAAKAWAGVDRDTAEVPVPVPPHRLSPWSGSAACGLD 129
Query 122 TVVHGWDLAVATGQAGELPEHLAEAAQQVAAELVPVLRPRGLFA 165
VH WD+A ATG+ L A +VA E+V LRP G +A
Sbjct 130 AAVHAWDIARATGRPSPLTPESARPLLEVAREIVEPLRPYGAYA 173
>gi|320010151|gb|ADW05001.1| hypothetical protein Sfla_3581 [Streptomyces flavogriseus ATCC
33331]
Length=190
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/183 (34%), Positives = 82/183 (45%), Gaps = 8/183 (4%)
Query 7 LVEAEQRLVALVSSIEADSYSSPTPCDRWDVRALLSHALASIDAFAAAVDGAPGPDMAQV 66
L EA R V +V I+ + TPC +DVRALL+H + I F V A G +
Sbjct 8 LEEATARAVPVVRGIDDAQLAGGTPCSEYDVRALLNHLFSVIGNF--RVLAAKG--TSDF 63
Query 67 FSGADIVGDDPLGATQRITRRSQAAWSTVRDLNAELSTFIGV-MPAGQALAIITFSTVVH 125
D+V D G T R AW + AE T G+ MPA ++ VH
Sbjct 64 SRTEDVVTGDWRGRFDDETARLVRAWG---EPGAEEGTTGGMAMPARTVGLMVLGDLTVH 120
Query 126 GWDLAVATGQAGELPEHLAEAAQQVAAELVPVLRPRGLFAHDVDLAGEATPTQRLVALTG 185
WDLA ATGQ + + A + P R +F +A EAT +R++A+TG
Sbjct 121 AWDLARATGQDYVPDPAVVAELEPGMAGMAPKAREMKVFGEPFPVAPEATAFERVLAMTG 180
Query 186 RKP 188
R P
Sbjct 181 RDP 183
>gi|300784522|ref|YP_003764813.1| hypothetical protein AMED_2616 [Amycolatopsis mediterranei U32]
gi|299794036|gb|ADJ44411.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
gi|340525943|gb|AEK41148.1| hypothetical protein RAM_13290 [Amycolatopsis mediterranei S699]
Length=187
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/176 (33%), Positives = 87/176 (50%), Gaps = 12/176 (6%)
Query 16 ALVSSIEADSYSSPTPCDRWDVRALLSHALASIDAFAA--AVDGAPGPDMAQVFSGADIV 73
ALVS++ AD ++ PT C WDVRA+++H LA +A A A G P PD D +
Sbjct 16 ALVSAVRADQWALPTACADWDVRAVINH-LAHGNAKVAFWAGTGPPAPD-------GDYL 67
Query 74 GDDPLGATQRITRRSQAAWSTVRDLNAELSTFIGVMPAGQALAIITFSTVVHGWDLAVAT 133
G P+ A ++A + + +++T +G +P + + + HGWD+A AT
Sbjct 68 GSAPVEAFAASVTAARAVLAAPGLFSRQVTTPLGEVPGVFLVHMRVNEYLAHGWDIADAT 127
Query 134 GQAGEL-PEHLAEAAQQVAAELVPVLR-PRGLFAHDVDLAGEATPTQRLVALTGRK 187
G+ +L PE A A +Q + R P G F ++ +AT L A GRK
Sbjct 128 GRPTDLAPELAARALEQWRSRFAATPRQPGGPFGPELPPPRDATAADELAAFLGRK 183
>gi|256397980|ref|YP_003119544.1| hypothetical protein Caci_8890 [Catenulispora acidiphila DSM
44928]
gi|256364206|gb|ACU77703.1| conserved hypothetical protein [Catenulispora acidiphila DSM
44928]
Length=199
Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/188 (29%), Positives = 78/188 (42%), Gaps = 3/188 (1%)
Query 4 YSNLVEAEQRLVALVSSIEADSYSSPTPCDRWDVRALLSHALASIDAFAAAVDGAPGPDM 63
++ L + L +V S+ A PTPC W V +L HA FA+ +DG GP+
Sbjct 6 FAALDASHHALRTVVGSLAAGDLGRPTPCTDWTVTQVLRHAAGDQLGFASFLDGGSGPEE 65
Query 64 AQVFSGADIVGDDPLGATQRITRRSQAAWSTVRDLNAELSTFI--GVMPAGQALAIITFS 121
F+ + DP ++ RS AAWS V E++ + + A
Sbjct 66 -NPFTPSATPPQDPKAYVEQAVTRSAAAWSAVDPDTEEVAVPVPPNKLSARVGAGACALD 124
Query 122 TVVHGWDLAVATGQAGELPEHLAEAAQQVAAELVPVLRPRGLFAHDVDLAGEATPTQRLV 181
VH WD+A+A G L L+ VA ++V LR G +A + L+
Sbjct 125 AAVHAWDIAMAVGAPSPLTPELSAELLDVARQIVEPLRQYGAYATALTPQPGDDAEAELL 184
Query 182 ALTGRKPR 189
GR PR
Sbjct 185 RYLGRDPR 192
Lambda K H
0.318 0.131 0.381
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 187037746340
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40