BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv1735c

Length=165
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15841198|ref|NP_336235.1|  hypothetical protein MT1776 [Mycoba...   328    2e-88
gi|15608873|ref|NP_216251.1|  hypothetical protein Rv1735c [Mycob...   328    2e-88
gi|289447350|ref|ZP_06437094.1|  hypothetical membrane protein [M...   326    6e-88
gi|340626740|ref|YP_004745192.1|  hypothetical protein MCAN_17461...   315    1e-84
gi|289745827|ref|ZP_06505205.1|  conserved hypothetical protein [...   299    1e-79
gi|333990723|ref|YP_004523337.1|  hypothetical protein JDM601_208...   178    3e-43
gi|119718198|ref|YP_925163.1|  C4-dicarboxylate transporter/malic...   148    2e-34
gi|226361379|ref|YP_002779157.1|  hypothetical protein ROP_19650 ...   146    8e-34
gi|317126461|ref|YP_004100573.1|  C4-dicarboxylate transporter/ma...   144    3e-33
gi|326383787|ref|ZP_08205472.1|  C4-dicarboxylate transporter/mal...   139    1e-31
gi|296118347|ref|ZP_06836927.1|  C4-dicarboxylate transporter/mal...   132    1e-29
gi|258653843|ref|YP_003202999.1|  C4-dicarboxylate transporter/ma...   125    2e-27
gi|260906474|ref|ZP_05914796.1|  C4-dicarboxylate transporter/mal...   116    1e-24
gi|308177988|ref|YP_003917394.1|  permease [Arthrobacter arilaite...   113    1e-23
gi|257069384|ref|YP_003155639.1|  tellurite resistance protein-li...   110    9e-23
gi|75674976|ref|YP_317397.1|  C4-dicarboxylate transporter/malic ...  91.3    4e-17
gi|138896768|ref|YP_001127221.1|  putative C4-dicarboxylate trans...  91.3    5e-17
gi|198283635|ref|YP_002219956.1|  C4-dicarboxylate transporter/ma...  90.5    6e-17
gi|344199614|ref|YP_004783940.1|  C4-dicarboxylate transporter/ma...  89.7    1e-16
gi|209884283|ref|YP_002288140.1|  putative C4-dicarboxylate trans...  89.7    1e-16
gi|337742030|ref|YP_004633758.1|  C4-dicarboxylate transporter/ma...  89.7    1e-16
gi|85717102|ref|ZP_01048062.1|  C4-dicarboxylate transporter/mali...  89.7    1e-16
gi|33595939|ref|NP_883582.1|  putative C4-dicarboxylate transport...  89.4    1e-16
gi|92118903|ref|YP_578632.1|  C4-dicarboxylate transporter/malic ...  87.8    4e-16
gi|258591537|emb|CBE67838.1|  putative C4-dicarboxylate transport...  87.4    6e-16
gi|33601315|ref|NP_888875.1|  C4-dicarboxylate ABC transporter pe...  87.4    6e-16
gi|224367186|ref|YP_002601349.1|  predicted C4-dicarboxylate tran...  84.0    8e-15
gi|126665812|ref|ZP_01736793.1|  putative C4-dicarboxylate transp...  83.2    1e-14
gi|91201161|emb|CAJ74220.1|  conserved hypothetical protein [Cand...  83.2    1e-14
gi|332284057|ref|YP_004415968.1|  hypothetical protein PT7_0804 [...  83.2    1e-14
gi|126666281|ref|ZP_01737260.1|  putative C4-dicarboxylate transp...  83.2    1e-14
gi|284035072|ref|YP_003385002.1|  C4-dicarboxylate transporter/ma...  82.8    1e-14
gi|149176066|ref|ZP_01854683.1|  putative C4-dicarboxylate transp...  82.4    2e-14
gi|299132119|ref|ZP_07025314.1|  C4-dicarboxylate transporter/mal...  82.4    2e-14
gi|253574390|ref|ZP_04851731.1|  C4-dicarboxylate transporter/mal...  81.3    5e-14
gi|304312345|ref|YP_003811943.1|  Putative C4-dicarboxylate trans...  80.1    1e-13
gi|340782670|ref|YP_004749277.1|  C4-dicarboxylate transporter/ma...  79.7    1e-13
gi|163855939|ref|YP_001630237.1|  hypothetical protein Bpet1629 [...  79.7    1e-13
gi|111019245|ref|YP_702217.1|  hypothetical protein RHA1_ro02252 ...  77.0    8e-13
gi|297161368|gb|ADI11080.1|  C4-dicarboxylate transporter/malic a...  76.6    1e-12
gi|241764665|ref|ZP_04762678.1|  C4-dicarboxylate transporter/mal...  76.3    1e-12
gi|89902896|ref|YP_525367.1|  C4-dicarboxylate transporter/malic ...  75.1    3e-12
gi|319764070|ref|YP_004128007.1|  c4-dicarboxylate transporter/ma...  74.7    4e-12
gi|222111971|ref|YP_002554235.1|  c4-dicarboxylate transporter/ma...  73.9    7e-12
gi|326800091|ref|YP_004317910.1|  C4-dicarboxylate transporter/ma...  73.2    1e-11
gi|196231244|ref|ZP_03130103.1|  C4-dicarboxylate transporter/mal...  72.8    2e-11
gi|77163619|ref|YP_342144.1|  C4-dicarboxylate transporter/malic ...  71.6    4e-11
gi|86158186|ref|YP_464971.1|  C4-dicarboxylate transporter/malic ...  70.9    6e-11
gi|254436118|ref|ZP_05049625.1|  C4-dicarboxylate transporter/mal...  70.5    8e-11
gi|56476536|ref|YP_158125.1|  putative C4-dicarboxylate transport...  70.5    8e-11


>gi|15841198|ref|NP_336235.1| hypothetical protein MT1776 [Mycobacterium tuberculosis CDC1551]
 gi|148822941|ref|YP_001287695.1| hypothetical protein TBFG_11752 [Mycobacterium tuberculosis F11]
 gi|167968652|ref|ZP_02550929.1| hypothetical membrane protein [Mycobacterium tuberculosis H37Ra]
 38 more sequence titles
 Length=197

 Score =  328 bits (841),  Expect = 2e-88, Method: Compositional matrix adjust.
 Identities = 165/165 (100%), Positives = 165/165 (100%), Gaps = 0/165 (0%)

Query  1    MGATAITVLAGAHIVEMADAPMAIVTSGLVAGASVVFWAFGPWLIPPLVAASIWKHVVHR  60
            MGATAITVLAGAHIVEMADAPMAIVTSGLVAGASVVFWAFGPWLIPPLVAASIWKHVVHR
Sbjct  33   MGATAITVLAGAHIVEMADAPMAIVTSGLVAGASVVFWAFGPWLIPPLVAASIWKHVVHR  92

Query  61   VPLRYEATLWSVVFPLGMYGVGAYRLGLAAHLPIVESIGEFEGWVALAVWTITFVAMLHH  120
            VPLRYEATLWSVVFPLGMYGVGAYRLGLAAHLPIVESIGEFEGWVALAVWTITFVAMLHH
Sbjct  93   VPLRYEATLWSVVFPLGMYGVGAYRLGLAAHLPIVESIGEFEGWVALAVWTITFVAMLHH  152

Query  121  LAATIGRSGRSSHAIGAADDTHAIICRPPRSFDHQVRAFRRNQPM  165
            LAATIGRSGRSSHAIGAADDTHAIICRPPRSFDHQVRAFRRNQPM
Sbjct  153  LAATIGRSGRSSHAIGAADDTHAIICRPPRSFDHQVRAFRRNQPM  197


>gi|15608873|ref|NP_216251.1| hypothetical protein Rv1735c [Mycobacterium tuberculosis H37Rv]
 gi|31792923|ref|NP_855416.1| hypothetical protein Mb1764c [Mycobacterium bovis AF2122/97]
 gi|121637643|ref|YP_977866.1| hypothetical protein BCG_1774c [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 24 more sequence titles
 Length=165

 Score =  328 bits (840),  Expect = 2e-88, Method: Compositional matrix adjust.
 Identities = 165/165 (100%), Positives = 165/165 (100%), Gaps = 0/165 (0%)

Query  1    MGATAITVLAGAHIVEMADAPMAIVTSGLVAGASVVFWAFGPWLIPPLVAASIWKHVVHR  60
            MGATAITVLAGAHIVEMADAPMAIVTSGLVAGASVVFWAFGPWLIPPLVAASIWKHVVHR
Sbjct  1    MGATAITVLAGAHIVEMADAPMAIVTSGLVAGASVVFWAFGPWLIPPLVAASIWKHVVHR  60

Query  61   VPLRYEATLWSVVFPLGMYGVGAYRLGLAAHLPIVESIGEFEGWVALAVWTITFVAMLHH  120
            VPLRYEATLWSVVFPLGMYGVGAYRLGLAAHLPIVESIGEFEGWVALAVWTITFVAMLHH
Sbjct  61   VPLRYEATLWSVVFPLGMYGVGAYRLGLAAHLPIVESIGEFEGWVALAVWTITFVAMLHH  120

Query  121  LAATIGRSGRSSHAIGAADDTHAIICRPPRSFDHQVRAFRRNQPM  165
            LAATIGRSGRSSHAIGAADDTHAIICRPPRSFDHQVRAFRRNQPM
Sbjct  121  LAATIGRSGRSSHAIGAADDTHAIICRPPRSFDHQVRAFRRNQPM  165


>gi|289447350|ref|ZP_06437094.1| hypothetical membrane protein [Mycobacterium tuberculosis CPHL_A]
 gi|289420308|gb|EFD17509.1| hypothetical membrane protein [Mycobacterium tuberculosis CPHL_A]
Length=165

 Score =  326 bits (836),  Expect = 6e-88, Method: Compositional matrix adjust.
 Identities = 164/165 (99%), Positives = 164/165 (99%), Gaps = 0/165 (0%)

Query  1    MGATAITVLAGAHIVEMADAPMAIVTSGLVAGASVVFWAFGPWLIPPLVAASIWKHVVHR  60
            MGATAITVLAGAHIVEMAD PMAIVTSGLVAGASVVFWAFGPWLIPPLVAASIWKHVVHR
Sbjct  1    MGATAITVLAGAHIVEMADVPMAIVTSGLVAGASVVFWAFGPWLIPPLVAASIWKHVVHR  60

Query  61   VPLRYEATLWSVVFPLGMYGVGAYRLGLAAHLPIVESIGEFEGWVALAVWTITFVAMLHH  120
            VPLRYEATLWSVVFPLGMYGVGAYRLGLAAHLPIVESIGEFEGWVALAVWTITFVAMLHH
Sbjct  61   VPLRYEATLWSVVFPLGMYGVGAYRLGLAAHLPIVESIGEFEGWVALAVWTITFVAMLHH  120

Query  121  LAATIGRSGRSSHAIGAADDTHAIICRPPRSFDHQVRAFRRNQPM  165
            LAATIGRSGRSSHAIGAADDTHAIICRPPRSFDHQVRAFRRNQPM
Sbjct  121  LAATIGRSGRSSHAIGAADDTHAIICRPPRSFDHQVRAFRRNQPM  165


>gi|340626740|ref|YP_004745192.1| hypothetical protein MCAN_17461 [Mycobacterium canettii CIPT 
140010059]
 gi|340004930|emb|CCC44078.1| hypothetical membrane protein [Mycobacterium canettii CIPT 140010059]
Length=165

 Score =  315 bits (807),  Expect = 1e-84, Method: Compositional matrix adjust.
 Identities = 160/165 (97%), Positives = 160/165 (97%), Gaps = 0/165 (0%)

Query  1    MGATAITVLAGAHIVEMADAPMAIVTSGLVAGASVVFWAFGPWLIPPLVAASIWKHVVHR  60
            MGATAITVLAGAHIVEMADAPMAIVTSGLVAGASVVFWAF  WLIPPLVAASIWKHVVHR
Sbjct  1    MGATAITVLAGAHIVEMADAPMAIVTSGLVAGASVVFWAFLTWLIPPLVAASIWKHVVHR  60

Query  61   VPLRYEATLWSVVFPLGMYGVGAYRLGLAAHLPIVESIGEFEGWVALAVWTITFVAMLHH  120
            VPLRYEATLWSVVFPLGMYGVG YRLGLAAHLPIVESI EFEGWVALAVWTITFVAMLHH
Sbjct  61   VPLRYEATLWSVVFPLGMYGVGVYRLGLAAHLPIVESISEFEGWVALAVWTITFVAMLHH  120

Query  121  LAATIGRSGRSSHAIGAADDTHAIICRPPRSFDHQVRAFRRNQPM  165
            LAATIG SGRSSHAIGAADDTHAIICRPPRSFDHQVRAFRRNQPM
Sbjct  121  LAATIGPSGRSSHAIGAADDTHAIICRPPRSFDHQVRAFRRNQPM  165


>gi|289745827|ref|ZP_06505205.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289686355|gb|EFD53843.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
Length=149

 Score =  299 bits (765),  Expect = 1e-79, Method: Compositional matrix adjust.
 Identities = 149/149 (100%), Positives = 149/149 (100%), Gaps = 0/149 (0%)

Query  17   MADAPMAIVTSGLVAGASVVFWAFGPWLIPPLVAASIWKHVVHRVPLRYEATLWSVVFPL  76
            MADAPMAIVTSGLVAGASVVFWAFGPWLIPPLVAASIWKHVVHRVPLRYEATLWSVVFPL
Sbjct  1    MADAPMAIVTSGLVAGASVVFWAFGPWLIPPLVAASIWKHVVHRVPLRYEATLWSVVFPL  60

Query  77   GMYGVGAYRLGLAAHLPIVESIGEFEGWVALAVWTITFVAMLHHLAATIGRSGRSSHAIG  136
            GMYGVGAYRLGLAAHLPIVESIGEFEGWVALAVWTITFVAMLHHLAATIGRSGRSSHAIG
Sbjct  61   GMYGVGAYRLGLAAHLPIVESIGEFEGWVALAVWTITFVAMLHHLAATIGRSGRSSHAIG  120

Query  137  AADDTHAIICRPPRSFDHQVRAFRRNQPM  165
            AADDTHAIICRPPRSFDHQVRAFRRNQPM
Sbjct  121  AADDTHAIICRPPRSFDHQVRAFRRNQPM  149


>gi|333990723|ref|YP_004523337.1| hypothetical protein JDM601_2083 [Mycobacterium sp. JDM601]
 gi|333486691|gb|AEF36083.1| conserved hypothetical membrane protein [Mycobacterium sp. JDM601]
Length=341

 Score =  178 bits (451),  Expect = 3e-43, Method: Compositional matrix adjust.
 Identities = 87/125 (70%), Positives = 101/125 (81%), Gaps = 0/125 (0%)

Query  1    MGATAITVLAGAHIVEMADAPMAIVTSGLVAGASVVFWAFGPWLIPPLVAASIWKHVVHR  60
            MGA +ITVLAGA IVEMA+APM   T GL+AG SV+FWAFG WLIPPL+AA +W+HVVHR
Sbjct  208  MGAASITVLAGARIVEMAEAPMVTATRGLIAGTSVLFWAFGTWLIPPLIAAGVWRHVVHR  267

Query  61   VPLRYEATLWSVVFPLGMYGVGAYRLGLAAHLPIVESIGEFEGWVALAVWTITFVAMLHH  120
            + LRYEA  WSV+FPLGMYGVG++ LG A HLPIV  IG  + W+ALA W ITFV MLHH
Sbjct  268  ISLRYEAPWWSVIFPLGMYGVGSHYLGQADHLPIVYYIGSVQSWIALAAWAITFVLMLHH  327

Query  121  LAATI  125
            LA T+
Sbjct  328  LAVTL  332


>gi|119718198|ref|YP_925163.1| C4-dicarboxylate transporter/malic acid transport protein [Nocardioides 
sp. JS614]
 gi|119538859|gb|ABL83476.1| C4-dicarboxylate transporter/malic acid transport protein [Nocardioides 
sp. JS614]
Length=352

 Score =  148 bits (374),  Expect = 2e-34, Method: Compositional matrix adjust.
 Identities = 75/127 (60%), Positives = 90/127 (71%), Gaps = 0/127 (0%)

Query  1    MGATAITVLAGAHIVEMADAPMAIVTSGLVAGASVVFWAFGPWLIPPLVAASIWKHVVHR  60
            MGA AITVLAGA IVEMADAPM   T  L+AG +VVFWAF  WLIPPLVAA +W+H++ +
Sbjct  220  MGALAITVLAGARIVEMADAPMVDATRDLIAGLAVVFWAFATWLIPPLVAAGVWRHMIRK  279

Query  61   VPLRYEATLWSVVFPLGMYGVGAYRLGLAAHLPIVESIGEFEGWVALAVWTITFVAMLHH  120
            +PLRY+ TLWS++FPLGMY      LG A +LP+V  I   E WVA A     F+AML H
Sbjct  280  IPLRYDPTLWSMIFPLGMYAAAGIYLGRADNLPLVHRIASIELWVAFAAALTVFIAMLVH  339

Query  121  LAATIGR  127
            L  T+ R
Sbjct  340  LDRTVRR  346


>gi|226361379|ref|YP_002779157.1| hypothetical protein ROP_19650 [Rhodococcus opacus B4]
 gi|226239864|dbj|BAH50212.1| hypothetical membrane protein [Rhodococcus opacus B4]
Length=356

 Score =  146 bits (369),  Expect = 8e-34, Method: Compositional matrix adjust.
 Identities = 73/129 (57%), Positives = 91/129 (71%), Gaps = 0/129 (0%)

Query  1    MGATAITVLAGAHIVEMADAPMAIVTSGLVAGASVVFWAFGPWLIPPLVAASIWKHVVHR  60
            MGA AITVLAGA IVEM DAPM   T GL+ G +VVFW+F  WLIP LVAA  W+H+ ++
Sbjct  218  MGACAITVLAGARIVEMEDAPMVNATRGLIGGFAVVFWSFATWLIPVLVAAGWWRHIANK  277

Query  61   VPLRYEATLWSVVFPLGMYGVGAYRLGLAAHLPIVESIGEFEGWVALAVWTITFVAMLHH  120
            VPLRY+AT+WS+VFPLGMY V    LG A H+P+V  +G  E W A  VW + FV M+ H
Sbjct  278  VPLRYDATVWSIVFPLGMYAVAGIYLGRADHIPLVGMVGSAELWCAFTVWCVAFVVMVVH  337

Query  121  LAATIGRSG  129
            L  ++  +G
Sbjct  338  LWRSVVHAG  346


>gi|317126461|ref|YP_004100573.1| C4-dicarboxylate transporter/malic acid transport protein [Intrasporangium 
calvum DSM 43043]
 gi|315590549|gb|ADU49846.1| C4-dicarboxylate transporter/malic acid transport protein [Intrasporangium 
calvum DSM 43043]
Length=354

 Score =  144 bits (364),  Expect = 3e-33, Method: Compositional matrix adjust.
 Identities = 76/131 (59%), Positives = 89/131 (68%), Gaps = 0/131 (0%)

Query  1    MGATAITVLAGAHIVEMADAPMAIVTSGLVAGASVVFWAFGPWLIPPLVAASIWKHVVHR  60
            MGA AITV+AGA IVEM  APMA  T GLVAG SVVFWAF  WLIP LVAA +W+H V +
Sbjct  224  MGAVAITVVAGARIVEMESAPMADATQGLVAGLSVVFWAFATWLIPVLVAAGVWRHYVRK  283

Query  61   VPLRYEATLWSVVFPLGMYGVGAYRLGLAAHLPIVESIGEFEGWVALAVWTITFVAMLHH  120
            VPL Y  TLWS++FPLGMY V    LG A  LPIVE+IG    WVA+  W + F+AM   
Sbjct  284  VPLVYVPTLWSIIFPLGMYAVAGIYLGRADRLPIVEAIGSSWLWVAVTAWLLVFIAMTRS  343

Query  121  LAATIGRSGRS  131
            +   + R  R+
Sbjct  344  VGTALVRPDRT  354


>gi|326383787|ref|ZP_08205472.1| C4-dicarboxylate transporter/malic acid transport protein [Gordonia 
neofelifaecis NRRL B-59395]
 gi|326197551|gb|EGD54740.1| C4-dicarboxylate transporter/malic acid transport protein [Gordonia 
neofelifaecis NRRL B-59395]
Length=350

 Score =  139 bits (350),  Expect = 1e-31, Method: Compositional matrix adjust.
 Identities = 68/130 (53%), Positives = 91/130 (70%), Gaps = 3/130 (2%)

Query  1    MGATAITVLAGAHIVEMADAPMAIVTSGLVAGASVVFWAFGPWLIPPLVAASIWKHVVHR  60
            MGATAITV+AGA+I  MAD P+     G +   SV+FWAFG WLIPPLV A  W+HV HR
Sbjct  214  MGATAITVVAGANIGAMADVPVLSTVRGTIEAGSVLFWAFGTWLIPPLVFAGYWRHVRHR  273

Query  61   VPLRYEATLWSVVFPLGMYGVGAYRLGLAAHLPIVESIGEFEGWVALAVWTITFVAMLHH  120
            VPLRY+ +LW++VFPL MYGVG +++G    LP++E++G  E W+A+  W +TF      
Sbjct  274  VPLRYDVSLWAIVFPLAMYGVGCHQIGSVNDLPLLENLGLVEIWIAIVAWVLTFCGF---  330

Query  121  LAATIGRSGR  130
            +A+ +GR  R
Sbjct  331  VASLVGRRPR  340


>gi|296118347|ref|ZP_06836927.1| C4-dicarboxylate transporter/malic acid transport protein [Corynebacterium 
ammoniagenes DSM 20306]
 gi|295968625|gb|EFG81870.1| C4-dicarboxylate transporter/malic acid transport protein [Corynebacterium 
ammoniagenes DSM 20306]
Length=374

 Score =  132 bits (333),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 65/131 (50%), Positives = 84/131 (65%), Gaps = 0/131 (0%)

Query  1    MGATAITVLAGAHIVEMADAPMAIVTSGLVAGASVVFWAFGPWLIPPLVAASIWKHVVHR  60
            MGA AI V+AG +IV M   PM   T  L+ G  VVFW+F  WLIP LV A +W+H + +
Sbjct  231  MGALAIAVVAGTNIVNMESTPMVEATRTLIEGTIVVFWSFCLWLIPMLVGAGVWRHFIRK  290

Query  61   VPLRYEATLWSVVFPLGMYGVGAYRLGLAAHLPIVESIGEFEGWVALAVWTITFVAMLHH  120
            +PL Y  TLWS+VFP+GM+ V +  LG    LP VE++GE   W+A+AVW I F+AML H
Sbjct  291  IPLAYTPTLWSMVFPIGMFSVASVTLGRVDSLPTVEALGEVAVWIAVAVWAIVFIAMLRH  350

Query  121  LAATIGRSGRS  131
                  R+GR 
Sbjct  351  FVLLFIRTGRE  361


>gi|258653843|ref|YP_003202999.1| C4-dicarboxylate transporter/malic acid transport protein [Nakamurella 
multipartita DSM 44233]
 gi|258557068|gb|ACV80010.1| C4-dicarboxylate transporter/malic acid transport protein [Nakamurella 
multipartita DSM 44233]
Length=348

 Score =  125 bits (315),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 65/116 (57%), Positives = 76/116 (66%), Gaps = 0/116 (0%)

Query  1    MGATAITVLAGAHIVEMADAPMAIVTSGLVAGASVVFWAFGPWLIPPLVAASIWKHVVHR  60
            MGA AIT +AGA I EM  APM   T  ++AG SV+ W    WLIP LVA   W+H+ HR
Sbjct  215  MGALAITAVAGAQITEMDSAPMVNATRAVIAGLSVIAWCVATWLIPVLVAVGWWRHIRHR  274

Query  61   VPLRYEATLWSVVFPLGMYGVGAYRLGLAAHLPIVESIGEFEGWVALAVWTITFVA  116
            +PLRYE  LWS+VFPLGMY V    LG A HLP+V++IG    WVA AVW    VA
Sbjct  275  IPLRYEPGLWSLVFPLGMYAVAGIDLGRADHLPLVQTIGAAWSWVATAVWATVLVA  330


>gi|260906474|ref|ZP_05914796.1| C4-dicarboxylate transporter/malic acid transport protein [Brevibacterium 
linens BL2]
Length=338

 Score =  116 bits (290),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 62/136 (46%), Positives = 84/136 (62%), Gaps = 0/136 (0%)

Query  1    MGATAITVLAGAHIVEMADAPMAIVTSGLVAGASVVFWAFGPWLIPPLVAASIWKHVVHR  60
            MGA AI+V+AG+ I+E   AP+   T+ ++AGAS + W+   WLIP LV A +W+H  HR
Sbjct  203  MGALAISVVAGSKILEGGTAPILAATTVIIAGASAILWSISTWLIPALVIAGLWRHFGHR  262

Query  61   VPLRYEATLWSVVFPLGMYGVGAYRLGLAAHLPIVESIGEFEGWVALAVWTITFVAMLHH  120
            +PL Y A LWS+VFPLGMY   +  +G    +PI+  IG    W+ALAVW I F AM+  
Sbjct  263  IPLGYSAGLWSMVFPLGMYSGASTNVGKVDDVPIISWIGAQWYWIALAVWAIVFAAMVWS  322

Query  121  LAATIGRSGRSSHAIG  136
               ++   G S  A G
Sbjct  323  FVKSMSARGSSGVAAG  338


>gi|308177988|ref|YP_003917394.1| permease [Arthrobacter arilaitensis Re117]
 gi|307745451|emb|CBT76423.1| putative permease [Arthrobacter arilaitensis Re117]
Length=360

 Score =  113 bits (282),  Expect = 1e-23, Method: Compositional matrix adjust.
 Identities = 62/120 (52%), Positives = 79/120 (66%), Gaps = 0/120 (0%)

Query  1    MGATAITVLAGAHIVEMADAPMAIVTSGLVAGASVVFWAFGPWLIPPLVAASIWKHVVHR  60
            MGA AI V+AG  I+ M   PM   T  L+AG    FW +  WLIP LV A +W+HVVHR
Sbjct  228  MGAMAIAVVAGTKIIAMESTPMVAATRVLIAGTVAAFWGYCLWLIPVLVGAGVWRHVVHR  287

Query  61   VPLRYEATLWSVVFPLGMYGVGAYRLGLAAHLPIVESIGEFEGWVALAVWTITFVAMLHH  120
            +PL Y  TLWS+VFP+GM+ V +  LG A  LP+VE+IG+    VA+ VW + FVAM+ H
Sbjct  288  IPLGYTPTLWSIVFPVGMFAVASINLGRADSLPVVEAIGDGSLVVAVLVWALVFVAMIRH  347


>gi|257069384|ref|YP_003155639.1| tellurite resistance protein-like permease [Brachybacterium faecium 
DSM 4810]
 gi|256560202|gb|ACU86049.1| tellurite resistance protein-like permease [Brachybacterium faecium 
DSM 4810]
Length=357

 Score =  110 bits (274),  Expect = 9e-23, Method: Compositional matrix adjust.
 Identities = 52/100 (52%), Positives = 67/100 (67%), Gaps = 0/100 (0%)

Query  1    MGATAITVLAGAHIVEMADAPMAIVTSGLVAGASVVFWAFGPWLIPPLVAASIWKHVVHR  60
            MGA AI V+AGA I  M   PM     GL+ G  V+FW F  W +P L  A +W+H++HR
Sbjct  225  MGALAIAVVAGAGIYAMDSVPMVDAARGLIGGTVVIFWCFALWQLPLLAGAGLWRHLIHR  284

Query  61   VPLRYEATLWSVVFPLGMYGVGAYRLGLAAHLPIVESIGE  100
            VPLRY  +LWS+VFPLGM+ V + RLG   HLP+VE +G+
Sbjct  285  VPLRYVPSLWSIVFPLGMFAVASMRLGRVEHLPMVEIVGD  324


>gi|75674976|ref|YP_317397.1| C4-dicarboxylate transporter/malic acid transport protein [Nitrobacter 
winogradskyi Nb-255]
 gi|74419846|gb|ABA04045.1| C4-dicarboxylate transporter/malic acid transport protein [Nitrobacter 
winogradskyi Nb-255]
Length=357

 Score = 91.3 bits (225),  Expect = 4e-17, Method: Compositional matrix adjust.
 Identities = 50/126 (40%), Positives = 69/126 (55%), Gaps = 1/126 (0%)

Query  1    MGATAITVLAGAHIVEMA-DAPMAIVTSGLVAGASVVFWAFGPWLIPPLVAASIWKHVVH  59
            MGA AI+ LAG+ ++E A DA         + G ++ FWA G W IP L+   +W+H   
Sbjct  225  MGAMAISTLAGSLLIENAADAWFLEELLPFLKGFTIFFWAAGTWWIPLLIILFVWRHFYR  284

Query  60   RVPLRYEATLWSVVFPLGMYGVGAYRLGLAAHLPIVESIGEFEGWVALAVWTITFVAMLH  119
            R PLRY+   WS VFPLGMY V  Y +  A  L  +  I +   +VAL  WT  F+ ++ 
Sbjct  285  RFPLRYDPAYWSAVFPLGMYTVCTYEMAGAMRLEFLRPIADVFVYVALLAWTAAFIGLVK  344

Query  120  HLAATI  125
             LA  +
Sbjct  345  KLAGNL  350


>gi|138896768|ref|YP_001127221.1| putative C4-dicarboxylate transporter [Geobacillus thermodenitrificans 
NG80-2]
 gi|134268281|gb|ABO68476.1| Putative C4-dicarboxylate transporter [Geobacillus thermodenitrificans 
NG80-2]
Length=368

 Score = 91.3 bits (225),  Expect = 5e-17, Method: Compositional matrix adjust.
 Identities = 49/138 (36%), Positives = 76/138 (56%), Gaps = 4/138 (2%)

Query  1    MGATAITVLAGAHIVEMADAPMAIVTSGL--VAGASVVFWAFGPWLIPPLVAASIWKHVV  58
            MGA AIT LAG+ ++   D   + ++  L  + G ++ FW  G W IP L    IW+H+ 
Sbjct  225  MGAVAITTLAGSTLMLHVDN-WSFLSELLPFLKGFTLFFWITGTWWIPLLFILMIWRHLY  283

Query  59   HRVPLRYEATLWSVVFPLGMYGVGAYRLGLAAHLPIVESIGEFEGWVALAVWTITFVAML  118
            H  PL+Y+   W + FPL MY    Y+L  A  LP ++ I  F  +VA+  W + F+ ++
Sbjct  284  HHYPLKYDPQFWGMAFPLAMYTTSTYQLSKALSLPFLQVIPRFMVYVAMTAWLMVFLGLI  343

Query  119  HHLAATIGRS-GRSSHAI  135
            HHL A+  +  G  S ++
Sbjct  344  HHLYASFRQQRGEESSSL  361


>gi|198283635|ref|YP_002219956.1| C4-dicarboxylate transporter/malic acid transport protein [Acidithiobacillus 
ferrooxidans ATCC 53993]
 gi|218667748|ref|YP_002426261.1| C4-dicarboxylate transporter/malic acid transport protein, putative 
[Acidithiobacillus ferrooxidans ATCC 23270]
 gi|198248156|gb|ACH83749.1| C4-dicarboxylate transporter/malic acid transport protein [Acidithiobacillus 
ferrooxidans ATCC 53993]
 gi|218519961|gb|ACK80547.1| C4-dicarboxylate transporter/malic acid transport protein, putative 
[Acidithiobacillus ferrooxidans ATCC 23270]
Length=362

 Score = 90.5 bits (223),  Expect = 6e-17, Method: Compositional matrix adjust.
 Identities = 50/121 (42%), Positives = 68/121 (57%), Gaps = 1/121 (0%)

Query  1    MGATAITVLAGAH-IVEMADAPMAIVTSGLVAGASVVFWAFGPWLIPPLVAASIWKHVVH  59
            MGA AI+ LAG+  IV  A AP        + G +V +WA G W IP L+A   W+H V 
Sbjct  224  MGAMAISTLAGSLLIVNAAKAPYLHSLLPFLKGFTVFYWATGSWWIPLLIALEFWRHGVK  283

Query  60   RVPLRYEATLWSVVFPLGMYGVGAYRLGLAAHLPIVESIGEFEGWVALAVWTITFVAMLH  119
            R+P+RY+   W VVFPLGMY +    +  +  LP +  +G    ++AL  W IT   M+H
Sbjct  284  RLPVRYDPLYWGVVFPLGMYSLCTLHMAQSMDLPFLLPLGHVFLYLALLAWVITLAGMIH  343

Query  120  H  120
            H
Sbjct  344  H  344


>gi|344199614|ref|YP_004783940.1| C4-dicarboxylate transporter/malic acid transport protein [Acidithiobacillus 
ferrivorans SS3]
 gi|343775058|gb|AEM47614.1| C4-dicarboxylate transporter/malic acid transport protein [Acidithiobacillus 
ferrivorans SS3]
Length=372

 Score = 89.7 bits (221),  Expect = 1e-16, Method: Compositional matrix adjust.
 Identities = 53/138 (39%), Positives = 73/138 (53%), Gaps = 3/138 (2%)

Query  1    MGATAITVLAGAH-IVEMADAPMAIVTSGLVAGASVVFWAFGPWLIPPLVAASIWKHVVH  59
            MGA AI+ LAG+  IV  A AP        + G +V +W  G W IP LV   IW+H + 
Sbjct  234  MGAMAISTLAGSLLIVNAAKAPYLHSLLPFLKGFTVFYWVTGSWWIPLLVTLEIWRHGIK  293

Query  60   RVPLRYEATLWSVVFPLGMYGVGAYRLGLAAHLPIVESIGEFEGWVALAVWTITFVAMLH  119
            R+P+RY+   WSVVFPLGMY +    +  +  L  +  +G    ++AL  W IT   M+H
Sbjct  294  RLPIRYDPLYWSVVFPLGMYSLCTIHMAQSMDLSFLLPLGYAFFYLALLAWAITLAGMIH  353

Query  120  HLAATI--GRSGRSSHAI  135
            HL   +  G   R  H +
Sbjct  354  HLGLGLRAGTENRIPHPL  371


>gi|209884283|ref|YP_002288140.1| putative C4-dicarboxylate transporter/malic acid transport protein 
[Oligotropha carboxidovorans OM5]
 gi|209872479|gb|ACI92275.1| putative C4-dicarboxylate transporter/malic acid transport protein 
[Oligotropha carboxidovorans OM5]
Length=397

 Score = 89.7 bits (221),  Expect = 1e-16, Method: Compositional matrix adjust.
 Identities = 52/119 (44%), Positives = 69/119 (58%), Gaps = 1/119 (0%)

Query  1    MGATAITVLAGA-HIVEMADAPMAIVTSGLVAGASVVFWAFGPWLIPPLVAASIWKHVVH  59
            MGA AI+  AGA  IV     P        V GA++V WA+  W IP LVA  IW H+VH
Sbjct  250  MGAAAISTNAGAVLIVTDVAQPFLTAMRPFVEGATLVMWAWATWWIPLLVAFGIWTHIVH  309

Query  60   RVPLRYEATLWSVVFPLGMYGVGAYRLGLAAHLPIVESIGEFEGWVALAVWTITFVAML  118
            R PL Y    WS+VFPLGMY + + RL  AA +  + ++     W+ALA W++T V ++
Sbjct  310  RQPLTYTPLFWSLVFPLGMYALASLRLAQAADIGALAALSRVMVWIALAAWSLTAVGLV  368


>gi|337742030|ref|YP_004633758.1| C4-dicarboxylate transporter/malic acid transport protein [Oligotropha 
carboxidovorans OM5]
 gi|336096114|gb|AEI03940.1| C4-dicarboxylate transporter/malic acid transport protein [Oligotropha 
carboxidovorans OM4]
 gi|336099694|gb|AEI07517.1| C4-dicarboxylate transporter/malic acid transport protein [Oligotropha 
carboxidovorans OM5]
Length=372

 Score = 89.7 bits (221),  Expect = 1e-16, Method: Compositional matrix adjust.
 Identities = 53/122 (44%), Positives = 70/122 (58%), Gaps = 1/122 (0%)

Query  1    MGATAITVLAGA-HIVEMADAPMAIVTSGLVAGASVVFWAFGPWLIPPLVAASIWKHVVH  59
            MGA AI+  AGA  IV     P        V GA++V WA+  W IP LVA  IW H+VH
Sbjct  225  MGAAAISTNAGAVLIVTDVAQPFLTAMRPFVEGATLVMWAWATWWIPLLVAFGIWTHIVH  284

Query  60   RVPLRYEATLWSVVFPLGMYGVGAYRLGLAAHLPIVESIGEFEGWVALAVWTITFVAMLH  119
            R PL Y    WS+VFPLGMY + + RL  AA +  + ++     W+ALA W++T V ++ 
Sbjct  285  RQPLTYTPLFWSLVFPLGMYALASLRLAQAADIGALAALSRVMVWIALAAWSLTAVGLVV  344

Query  120  HL  121
             L
Sbjct  345  TL  346


>gi|85717102|ref|ZP_01048062.1| C4-dicarboxylate transporter/malic acid transport protein [Nitrobacter 
sp. Nb-311A]
 gi|85696062|gb|EAQ33960.1| C4-dicarboxylate transporter/malic acid transport protein [Nitrobacter 
sp. Nb-311A]
Length=258

 Score = 89.7 bits (221),  Expect = 1e-16, Method: Compositional matrix adjust.
 Identities = 48/126 (39%), Positives = 69/126 (55%), Gaps = 1/126 (0%)

Query  1    MGATAITVLAGAHIVEMA-DAPMAIVTSGLVAGASVVFWAFGPWLIPPLVAASIWKHVVH  59
            MGA AI+ LAG+ ++E A DA         + G ++ FWA G W IP L+   +W+H   
Sbjct  126  MGAMAISTLAGSLLIENAADAWFLEELLPFLKGFTIFFWAAGTWWIPLLIVLVVWRHFYR  185

Query  60   RVPLRYEATLWSVVFPLGMYGVGAYRLGLAAHLPIVESIGEFEGWVALAVWTITFVAMLH  119
            R PLRY+   WS VFPLGMY V  Y +  A  L  +  I +   ++AL  WT  F+ ++ 
Sbjct  186  RFPLRYDPAYWSAVFPLGMYTVCTYEMAGAMRLEFLRPIADVCVYIALLAWTAAFIGLVR  245

Query  120  HLAATI  125
             L + +
Sbjct  246  KLVSNL  251


>gi|33595939|ref|NP_883582.1| putative C4-dicarboxylate transporter [Bordetella parapertussis 
12822]
 gi|33566018|emb|CAE36573.1| putative C4-dicarboxylate transporter [Bordetella parapertussis]
Length=363

 Score = 89.4 bits (220),  Expect = 1e-16, Method: Compositional matrix adjust.
 Identities = 48/129 (38%), Positives = 72/129 (56%), Gaps = 1/129 (0%)

Query  1    MGATAITVLAGAHIVEMADA-PMAIVTSGLVAGASVVFWAFGPWLIPPLVAASIWKHVVH  59
            MGA AI+ LAG  +++ + A P+       V G +++FWA G W IP L+   +W+H + 
Sbjct  228  MGAMAISTLAGTLLLQQSHAWPLLQTVQPFVQGVTLLFWAGGSWWIPLLLVLGVWRHGLQ  287

Query  60   RVPLRYEATLWSVVFPLGMYGVGAYRLGLAAHLPIVESIGEFEGWVALAVWTITFVAMLH  119
            R PLRYE   W++VFPLGMY +  + L LA     +E +     WVAL  WT+  + ++ 
Sbjct  288  RHPLRYEGLYWAMVFPLGMYAMATHHLALALEQAWLEPLARAFMWVALGAWTLAALGLVG  347

Query  120  HLAATIGRS  128
             L   + R 
Sbjct  348  ALGQMLRRQ  356


>gi|92118903|ref|YP_578632.1| C4-dicarboxylate transporter/malic acid transport protein [Nitrobacter 
hamburgensis X14]
 gi|91801797|gb|ABE64172.1| C4-dicarboxylate transporter/malic acid transport protein [Nitrobacter 
hamburgensis X14]
Length=357

 Score = 87.8 bits (216),  Expect = 4e-16, Method: Compositional matrix adjust.
 Identities = 49/126 (39%), Positives = 66/126 (53%), Gaps = 1/126 (0%)

Query  1    MGATAITVLAGAHIVEMA-DAPMAIVTSGLVAGASVVFWAFGPWLIPPLVAASIWKHVVH  59
            MGA AI+ LAG+ ++E A DA         + G ++ FWA G W IP L+    W+H   
Sbjct  225  MGAMAISTLAGSILIENAADAWFLEELLPFLKGFTIFFWAAGTWWIPLLIVLVFWRHFYR  284

Query  60   RVPLRYEATLWSVVFPLGMYGVGAYRLGLAAHLPIVESIGEFEGWVALAVWTITFVAMLH  119
            R PLRY+   WS VFPLGMY V  Y +  A  L  +  I +   +VAL  W   FV ++ 
Sbjct  285  RFPLRYDPAYWSAVFPLGMYTVCTYEMAGAMRLEFLRPIADVFVYVALLAWAAAFVGLVK  344

Query  120  HLAATI  125
             L   +
Sbjct  345  KLVGNL  350


>gi|258591537|emb|CBE67838.1| putative C4-dicarboxylate transporter [NC10 bacterium 'Dutch 
sediment']
Length=348

 Score = 87.4 bits (215),  Expect = 6e-16, Method: Compositional matrix adjust.
 Identities = 47/126 (38%), Positives = 68/126 (54%), Gaps = 1/126 (0%)

Query  1    MGATAITVLAGAHIVEMA-DAPMAIVTSGLVAGASVVFWAFGPWLIPPLVAASIWKHVVH  59
            MGA AI+ LAG  ++  A D  +       + G +++FWA   W IP LV   +W+HV+ 
Sbjct  218  MGAMAISTLAGTVLIGKAPDFDLLQRMLPFLYGMTLLFWATATWWIPMLVTVGVWRHVMR  277

Query  60   RVPLRYEATLWSVVFPLGMYGVGAYRLGLAAHLPIVESIGEFEGWVALAVWTITFVAMLH  119
            R PL Y+   W  VFPLGMY V  +RL     LPI+  I  +  +VA   W   F+ ++H
Sbjct  278  RFPLAYDPLYWGAVFPLGMYTVCTFRLAEVTELPILMMIPHYFVYVAFGAWAAVFIGLMH  337

Query  120  HLAATI  125
             L+  +
Sbjct  338  QLSRCL  343


>gi|33601315|ref|NP_888875.1| C4-dicarboxylate ABC transporter permease [Bordetella bronchiseptica 
RB50]
 gi|33575751|emb|CAE32828.1| putative C4-dicarboxylate transporter [Bordetella bronchiseptica 
RB50]
Length=359

 Score = 87.4 bits (215),  Expect = 6e-16, Method: Compositional matrix adjust.
 Identities = 50/132 (38%), Positives = 75/132 (57%), Gaps = 1/132 (0%)

Query  1    MGATAITVLAGAHIVEMADA-PMAIVTSGLVAGASVVFWAFGPWLIPPLVAASIWKHVVH  59
            MGA AI+ LAG  +++ + A P+       V G +++FWA G W IP L+   +W+H + 
Sbjct  228  MGAMAISTLAGTLLLQQSHAWPLLQTVQPFVQGVTLLFWAGGSWWIPLLLVLGVWRHGLQ  287

Query  60   RVPLRYEATLWSVVFPLGMYGVGAYRLGLAAHLPIVESIGEFEGWVALAVWTITFVAMLH  119
            R PLRYE   W++VFPLGMY +  + L LA     +E +     WVAL  WT+  + +L 
Sbjct  288  RHPLRYEGLYWAMVFPLGMYAMATHHLALALEQAWLEPLARAFMWVALGAWTLAALGLLG  347

Query  120  HLAATIGRSGRS  131
             L+  + R  R+
Sbjct  348  ALSQALRRPARA  359


>gi|224367186|ref|YP_002601349.1| predicted C4-dicarboxylate transporter/malic acid transport protein 
[Desulfobacterium autotrophicum HRM2]
 gi|223689902|gb|ACN13185.1| predicted C4-dicarboxylate transporter/malic acid transport protein 
[Desulfobacterium autotrophicum HRM2]
Length=379

 Score = 84.0 bits (206),  Expect = 8e-15, Method: Compositional matrix adjust.
 Identities = 52/140 (38%), Positives = 72/140 (52%), Gaps = 3/140 (2%)

Query  1    MGATAITVLAGAH-IVEMADAPMAIVTSGLVAGASVVFWAFGPWLIPPLVAASIWKHVVH  59
            MGA AI+ LAGA  IV  +             G S+ FW+   W IP L    IWK VV 
Sbjct  242  MGAVAISTLAGATLIVNSSQFQFFEHLLPFTMGVSIFFWSAATWWIPFLFVLEIWKLVVR  301

Query  60   RVPLRYEATLWSVVFPLGMYGVGAYRLGLAAHLPIVESIGEFEGWVALAVWTITFVAMLH  119
            RV ++YE   W +VFPLGMY    Y+L +A  L  +  I  +  ++AL VW  TF+ +L 
Sbjct  302  RVRIKYEPQYWGMVFPLGMYTTCTYQLAIALDLKFLTVIPRYFIYLALFVWLFTFMGLLR  361

Query  120  HLAATIGRSGRSSHAIGAAD  139
             L+ ++  SG     +G  +
Sbjct  362  MLSRSV--SGIYHKKLGDGN  379


>gi|126665812|ref|ZP_01736793.1| putative C4-dicarboxylate transporter [Marinobacter sp. ELB17]
 gi|126629746|gb|EBA00363.1| putative C4-dicarboxylate transporter [Marinobacter sp. ELB17]
Length=343

 Score = 83.2 bits (204),  Expect = 1e-14, Method: Compositional matrix adjust.
 Identities = 48/120 (40%), Positives = 64/120 (54%), Gaps = 1/120 (0%)

Query  1    MGATAITVLAGAH-IVEMADAPMAIVTSGLVAGASVVFWAFGPWLIPPLVAASIWKHVVH  59
            MGA AI+ LAG+  IV + DAP        + G SV +WA G W IP L    IW+HV  
Sbjct  215  MGAMAISTLAGSLLIVNVKDAPFLDSLLPFLKGFSVFYWATGTWWIPMLFILGIWRHVYK  274

Query  60   RVPLRYEATLWSVVFPLGMYGVGAYRLGLAAHLPIVESIGEFEGWVALAVWTITFVAMLH  119
            R PL Y+   W  VFPLGMY    + +  A     ++ I     ++ALA W +TFV ++ 
Sbjct  275  RFPLEYDPLYWGAVFPLGMYAASTHEMAAALGFHFLDFIPISFFYLALAAWAVTFVGLVR  334


>gi|91201161|emb|CAJ74220.1| conserved hypothetical protein [Candidatus Kuenenia stuttgartiensis]
Length=344

 Score = 83.2 bits (204),  Expect = 1e-14, Method: Compositional matrix adjust.
 Identities = 48/124 (39%), Positives = 64/124 (52%), Gaps = 6/124 (4%)

Query  2    GATAITVLAGAHIV----EMADAPMAIVTSGLVAGASVVFWAFGPWLIPPLVAASIWKHV  57
            GA AIT LAGA I     ++ D  + I   G + G SV FW+FG W IP LV   IWK+V
Sbjct  215  GAVAITTLAGATISLSIPKIEDPFLDI--DGFIKGFSVFFWSFGTWWIPLLVIIGIWKYV  272

Query  58   VHRVPLRYEATLWSVVFPLGMYGVGAYRLGLAAHLPIVESIGEFEGWVALAVWTITFVAM  117
             H  P +Y    W + FPLG Y  G  +L  A  +  + +I +   ++A   W I FV M
Sbjct  273  YHMTPYKYNPLYWGLAFPLGTYTAGTLKLAEALGIGYISNISKVFIYIAYIAWLIVFVTM  332

Query  118  LHHL  121
            +   
Sbjct  333  IRSF  336


>gi|332284057|ref|YP_004415968.1| hypothetical protein PT7_0804 [Pusillimonas sp. T7-7]
 gi|330428010|gb|AEC19344.1| hypothetical protein PT7_0804 [Pusillimonas sp. T7-7]
Length=359

 Score = 83.2 bits (204),  Expect = 1e-14, Method: Compositional matrix adjust.
 Identities = 46/123 (38%), Positives = 67/123 (55%), Gaps = 1/123 (0%)

Query  1    MGATAITVLAGAHIVE-MADAPMAIVTSGLVAGASVVFWAFGPWLIPPLVAASIWKHVVH  59
            MGA AI+ LAG+ ++E  A AP        + G ++ +WA G W IP L+   +W++V  
Sbjct  232  MGAMAISTLAGSLLIEHSAGAPYLSSLQPFIKGFTIFYWAAGTWWIPMLLMLGVWRYVYK  291

Query  60   RVPLRYEATLWSVVFPLGMYGVGAYRLGLAAHLPIVESIGEFEGWVALAVWTITFVAMLH  119
            R PLRY+   W  VFPLGMY    Y L  A    ++  +      +A+  WT+TFV +L 
Sbjct  292  RFPLRYDPLYWGAVFPLGMYAACTYHLNQAMGFDLLAYLPPVFFSLAVLAWTLTFVGLLV  351

Query  120  HLA  122
             +A
Sbjct  352  RIA  354


>gi|126666281|ref|ZP_01737260.1| putative C4-dicarboxylate transporter [Marinobacter sp. ELB17]
 gi|126629082|gb|EAZ99700.1| putative C4-dicarboxylate transporter [Marinobacter sp. ELB17]
Length=186

 Score = 83.2 bits (204),  Expect = 1e-14, Method: Compositional matrix adjust.
 Identities = 48/118 (41%), Positives = 63/118 (54%), Gaps = 1/118 (0%)

Query  1    MGATAITVLAGAH-IVEMADAPMAIVTSGLVAGASVVFWAFGPWLIPPLVAASIWKHVVH  59
            MGA AI+ LAG+  IV + DAP        + G SV +WA G W IP L    IW+HV  
Sbjct  58   MGAMAISTLAGSLLIVNVKDAPFLDSLLPFLKGFSVFYWATGTWWIPMLFILGIWRHVYK  117

Query  60   RVPLRYEATLWSVVFPLGMYGVGAYRLGLAAHLPIVESIGEFEGWVALAVWTITFVAM  117
            R PL Y+   W  VFPLGMY    + +  A     ++ I     ++ALA W +TFV +
Sbjct  118  RFPLEYDPLYWGAVFPLGMYAASTHEMAAALGFHFLDFIPISFFYLALAAWAVTFVGL  175


>gi|284035072|ref|YP_003385002.1| C4-dicarboxylate transporter/malic acid transport protein [Spirosoma 
linguale DSM 74]
 gi|283814365|gb|ADB36203.1| C4-dicarboxylate transporter/malic acid transport protein [Spirosoma 
linguale DSM 74]
Length=351

 Score = 82.8 bits (203),  Expect = 1e-14, Method: Compositional matrix adjust.
 Identities = 54/139 (39%), Positives = 70/139 (51%), Gaps = 13/139 (9%)

Query  1    MGATAITVLAGAHIVEMADAPMAIVTSGL------VAGASVVFWAFGPWLIPPLVAASIW  54
            MGA AIT LAGA + E        V +GL      + G S++ W+   W IP ++   IW
Sbjct  217  MGAVAITTLAGATLTETIQT---TVGTGLADVLPFIKGISILAWSTATWWIPLIILLEIW  273

Query  55   KHVVHRVPLRYEATLWSVVFPLGMYGVGAYRLGLAAHLPIVESIGEFEGWVALAVWTITF  114
            +H V  VPL Y    WS+VFPLGMY V  +RL  A  +P +  I     +VAL  W +TF
Sbjct  274  RHGVKNVPLTYSPPYWSLVFPLGMYMVCTWRLSEALRMPFLRPISHACLYVALIAWGLTF  333

Query  115  VAMLHHLAATIGRSGRSSH  133
            +     L A I RS     
Sbjct  334  LG----LGAQIARSFSQQQ  348


>gi|149176066|ref|ZP_01854683.1| putative C4-dicarboxylate transporter [Planctomyces maris DSM 
8797]
 gi|148845220|gb|EDL59566.1| putative C4-dicarboxylate transporter [Planctomyces maris DSM 
8797]
Length=332

 Score = 82.4 bits (202),  Expect = 2e-14, Method: Compositional matrix adjust.
 Identities = 44/119 (37%), Positives = 67/119 (57%), Gaps = 3/119 (2%)

Query  1    MGATAITVLAGAHIVEMADAPMAIVTSGL--VAGASVVFWAFGPWLIPPLVAASIWKHVV  58
            MGA AI+ LAGA ++ +A   M I++  L  V G +++ W    W IP LV   +W+H++
Sbjct  203  MGAMAISTLAGASLISIARDSM-ILSQILPFVKGLTLLCWVTATWWIPLLVILGVWRHIL  261

Query  59   HRVPLRYEATLWSVVFPLGMYGVGAYRLGLAAHLPIVESIGEFEGWVALAVWTITFVAM  117
             RV   Y++  WS+VFPLGMY V  +RL +  +   +        ++AL  W IT + M
Sbjct  262  QRVSFSYDSQFWSIVFPLGMYSVSTHRLAVELNFSPLMQGANLVAYLALGAWLITIIKM  320


>gi|299132119|ref|ZP_07025314.1| C4-dicarboxylate transporter/malic acid transport protein [Afipia 
sp. 1NLS2]
 gi|298592256|gb|EFI52456.1| C4-dicarboxylate transporter/malic acid transport protein [Afipia 
sp. 1NLS2]
Length=349

 Score = 82.4 bits (202),  Expect = 2e-14, Method: Compositional matrix adjust.
 Identities = 47/123 (39%), Positives = 65/123 (53%), Gaps = 1/123 (0%)

Query  1    MGATAITVLAGAHIVEMA-DAPMAIVTSGLVAGASVVFWAFGPWLIPPLVAASIWKHVVH  59
            MGA AI+ LAG+ +++ A  AP        + G +V +WA G W IP L+   IW++   
Sbjct  222  MGAMAISTLAGSLLIQNAPHAPYLASLLPFLKGFTVFYWATGTWWIPMLLLLGIWRYGYK  281

Query  60   RVPLRYEATLWSVVFPLGMYGVGAYRLGLAAHLPIVESIGEFEGWVALAVWTITFVAMLH  119
            R P  Y+   W  VFPLGMY    +++  A     +  +     +VAL  WTITFV ML 
Sbjct  282  RFPFEYDPLYWGAVFPLGMYAACTWQMDRAMEFGFLAGLPRVFFYVALVAWTITFVGMLR  341

Query  120  HLA  122
             LA
Sbjct  342  TLA  344


>gi|253574390|ref|ZP_04851731.1| C4-dicarboxylate transporter/malic acid transporter [Paenibacillus 
sp. oral taxon 786 str. D14]
 gi|251846095|gb|EES74102.1| C4-dicarboxylate transporter/malic acid transporter [Paenibacillus 
sp. oral taxon 786 str. D14]
Length=237

 Score = 81.3 bits (199),  Expect = 5e-14, Method: Compositional matrix adjust.
 Identities = 47/122 (39%), Positives = 64/122 (53%), Gaps = 3/122 (2%)

Query  1    MGATAITVLAGAHIVEMADAPMAIVTS--GLVAGASVVFWAFGPWLIPPLVAASIWKHVV  58
            MGA AIT LAG+ ++  A A  + +T     + G ++ FW  G W IP L    IW+HV 
Sbjct  108  MGAVAITTLAGSTLMLHA-AKWSFLTELVPFLRGFTLFFWITGSWWIPLLFILMIWRHVY  166

Query  59   HRVPLRYEATLWSVVFPLGMYGVGAYRLGLAAHLPIVESIGEFEGWVALAVWTITFVAML  118
            HR PL Y+   W +VFPL MY    Y+L  A  LP +  I  F   +A++ W +     L
Sbjct  167  HRYPLMYDPQFWGMVFPLAMYTTSTYQLSQALDLPFLVVIPRFMVVIAISAWLVVLAGFL  226

Query  119  HH  120
             H
Sbjct  227  RH  228


>gi|304312345|ref|YP_003811943.1| Putative C4-dicarboxylate transporter [gamma proteobacterium 
HdN1]
 gi|301798078|emb|CBL46300.1| Putative C4-dicarboxylate transporter [gamma proteobacterium 
HdN1]
Length=365

 Score = 80.1 bits (196),  Expect = 1e-13, Method: Compositional matrix adjust.
 Identities = 45/118 (39%), Positives = 65/118 (56%), Gaps = 1/118 (0%)

Query  1    MGATAITVLAGAH-IVEMADAPMAIVTSGLVAGASVVFWAFGPWLIPPLVAASIWKHVVH  59
            MGA AI+ LAGA  I+ +  + +       + G +++FWA   W IP LV   +W++V H
Sbjct  226  MGAVAISTLAGALLILNVEKSELLQSLLPFLKGFTLLFWATATWWIPMLVILGVWRYVYH  285

Query  60   RVPLRYEATLWSVVFPLGMYGVGAYRLGLAAHLPIVESIGEFEGWVALAVWTITFVAM  117
            R+PL Y+   W  VFPLGMY V   RL  + HL  + +I      +AL  W  TF+ +
Sbjct  286  RLPLTYDPLYWGAVFPLGMYTVATIRLSESFHLKFLLTIPSIFVGLALTAWLFTFLGL  343


>gi|340782670|ref|YP_004749277.1| C4-dicarboxylate transporter/malic acid transport protein [Acidithiobacillus 
caldus SM-1]
 gi|340556822|gb|AEK58576.1| C4-dicarboxylate transporter/malic acid transport protein [Acidithiobacillus 
caldus SM-1]
Length=353

 Score = 79.7 bits (195),  Expect = 1e-13, Method: Compositional matrix adjust.
 Identities = 43/129 (34%), Positives = 70/129 (55%), Gaps = 1/129 (0%)

Query  1    MGATAITVLAGAHIVEMADAPMAIVTS-GLVAGASVVFWAFGPWLIPPLVAASIWKHVVH  59
            MGA AI+ LAG+ ++E   +   + +    V G +V +WA G W IP L+A  +W+H  H
Sbjct  224  MGAMAISTLAGSLLIEHGGSASYLHSLLPFVRGFTVFYWAAGSWWIPLLIALEVWRHGHH  283

Query  60   RVPLRYEATLWSVVFPLGMYGVGAYRLGLAAHLPIVESIGEFEGWVALAVWTITFVAMLH  119
             +P RY+   W +VFPLGMY +  + +  +  LP ++ I  F   +A   W    ++ML 
Sbjct  284  GLPFRYDPQYWGMVFPLGMYSLATHDMAKSMTLPFLQPISSFFFILAWCAWIFVVISMLR  343

Query  120  HLAATIGRS  128
              + +I  +
Sbjct  344  RYSVSIASN  352


>gi|163855939|ref|YP_001630237.1| hypothetical protein Bpet1629 [Bordetella petrii DSM 12804]
 gi|163259667|emb|CAP41968.1| hypothetical protein Bpet1629 [Bordetella petrii]
Length=392

 Score = 79.7 bits (195),  Expect = 1e-13, Method: Compositional matrix adjust.
 Identities = 43/122 (36%), Positives = 65/122 (54%), Gaps = 1/122 (0%)

Query  1    MGATAITVLAGAHIVEMA-DAPMAIVTSGLVAGASVVFWAFGPWLIPPLVAASIWKHVVH  59
            MGA AI+ LAG+ ++  A  AP  +     + G +V++WA G W IP L+   +W++V  
Sbjct  241  MGAMAISTLAGSLLILNAPQAPYLVSLLPFLKGFTVLYWATGTWWIPMLLCLGVWRYVFQ  300

Query  60   RVPLRYEATLWSVVFPLGMYGVGAYRLGLAAHLPIVESIGEFEGWVALAVWTITFVAMLH  119
            R P RY+   W  +FPLGMY    +++  A     +  +     +VAL  W +TF AM  
Sbjct  301  RFPFRYDPLYWGAIFPLGMYAACTWQMNRAMGFDFLGLLPPVFLYVALLGWLLTFTAMAR  360

Query  120  HL  121
             L
Sbjct  361  RL  362


>gi|111019245|ref|YP_702217.1| hypothetical protein RHA1_ro02252 [Rhodococcus jostii RHA1]
 gi|110818775|gb|ABG94059.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=88

 Score = 77.0 bits (188),  Expect = 8e-13, Method: Compositional matrix adjust.
 Identities = 37/77 (49%), Positives = 50/77 (65%), Gaps = 0/77 (0%)

Query  53   IWKHVVHRVPLRYEATLWSVVFPLGMYGVGAYRLGLAAHLPIVESIGEFEGWVALAVWTI  112
            I +HV ++VP+RY+AT+WS+VFPLGM  V    LG A HLP+V  +G  E W A  VW +
Sbjct  2    IGRHVANKVPVRYDATVWSIVFPLGMDAVAGIYLGRADHLPLVGIVGSAELWCAFTVWCV  61

Query  113  TFVAMLHHLAATIGRSG  129
             FV M+ HL  ++   G
Sbjct  62   AFVVMVVHLRRSVVHVG  78


>gi|297161368|gb|ADI11080.1| C4-dicarboxylate transporter/malic acid transport protein [Streptomyces 
bingchenggensis BCW-1]
Length=342

 Score = 76.6 bits (187),  Expect = 1e-12, Method: Compositional matrix adjust.
 Identities = 53/134 (40%), Positives = 71/134 (53%), Gaps = 10/134 (7%)

Query  1    MGATAITVLAGAHIVEMADAPMAIVTS---GLVAGASVVFWAFGPWLIPPLVAASIWKHV  57
            MGA AI++LAGA +V     P  +  S    +VAG  +V W +   L+P L+AA +W+H 
Sbjct  203  MGACAISLLAGARLV-----PQGLDASPPGDVVAGFLLVIWGWMTCLLPVLLAAGVWRHG  257

Query  58   VHRVPLRYEATLWSVVFPLGMYGVGAYRLGLAAHLPIVESIGEFEGWVALAVWTITFVAM  117
            VHRV L YE T W++VFPLGMY V    LG A     + ++G    W A   W +     
Sbjct  258  VHRVSLAYEPTWWTIVFPLGMYAVSTAALGTAEGPHRLVAVGHVMAWTASGAWAMVMFGA  317

Query  118  LHHLAATIGRSGRS  131
            L      IG+  RS
Sbjct  318  LG--GRGIGQKMRS  329


>gi|241764665|ref|ZP_04762678.1| C4-dicarboxylate transporter/malic acid transport protein [Acidovorax 
delafieldii 2AN]
 gi|241365885|gb|EER60528.1| C4-dicarboxylate transporter/malic acid transport protein [Acidovorax 
delafieldii 2AN]
Length=365

 Score = 76.3 bits (186),  Expect = 1e-12, Method: Compositional matrix adjust.
 Identities = 45/126 (36%), Positives = 64/126 (51%), Gaps = 1/126 (0%)

Query  1    MGATAITVLAGAH-IVEMADAPMAIVTSGLVAGASVVFWAFGPWLIPPLVAASIWKHVVH  59
            MGA AI+ LAG+  IV   DAP  +     + G +V +WA G W IP L+  ++W++   
Sbjct  231  MGAMAISTLAGSLLIVNAPDAPFLLSLQPFLKGFTVFYWATGTWWIPMLLVLAVWRYGFQ  290

Query  60   RVPLRYEATLWSVVFPLGMYGVGAYRLGLAAHLPIVESIGEFEGWVALAVWTITFVAMLH  119
            R  LRY+   W  VFPLGMY    + + LA     +  + +    VAL  W   F   +H
Sbjct  291  RFALRYDPLYWGAVFPLGMYAASTHEMRLAMGFDFLALVPQVFLGVALVAWLGAFTGAMH  350

Query  120  HLAATI  125
               AT+
Sbjct  351  SAFATL  356


>gi|89902896|ref|YP_525367.1| C4-dicarboxylate transporter/malic acid transport protein [Rhodoferax 
ferrireducens T118]
 gi|89347633|gb|ABD71836.1| C4-dicarboxylate transporter/malic acid transport protein [Rhodoferax 
ferrireducens T118]
Length=374

 Score = 75.1 bits (183),  Expect = 3e-12, Method: Compositional matrix adjust.
 Identities = 47/116 (41%), Positives = 65/116 (57%), Gaps = 1/116 (0%)

Query  1    MGATAITVLAGAH-IVEMADAPMAIVTSGLVAGASVVFWAFGPWLIPPLVAASIWKHVVH  59
            MGA AI+ LAG+  I+   DAP  +     + G +V +WA G W IP LV  SIW+HV  
Sbjct  235  MGAMAISTLAGSLLIINAPDAPFLLSLLPFLKGFTVFYWATGTWWIPMLVLLSIWRHVYK  294

Query  60   RVPLRYEATLWSVVFPLGMYGVGAYRLGLAAHLPIVESIGEFEGWVALAVWTITFV  115
            R P+RY+   W  VFPLGMY    +++  A    ++E +      VAL  W++ FV
Sbjct  295  RFPMRYDPLYWGAVFPLGMYATCTHQMLHAMEFELLEFLPPLFLIVALVTWSLAFV  350


>gi|319764070|ref|YP_004128007.1| c4-dicarboxylate transporter/malic acid transport protein [Alicycliphilus 
denitrificans BC]
 gi|330823655|ref|YP_004386958.1| C4-dicarboxylate transporter/malic acid transport protein [Alicycliphilus 
denitrificans K601]
 gi|317118631|gb|ADV01120.1| C4-dicarboxylate transporter/malic acid transport protein [Alicycliphilus 
denitrificans BC]
 gi|329309027|gb|AEB83442.1| C4-dicarboxylate transporter/malic acid transport protein [Alicycliphilus 
denitrificans K601]
Length=357

 Score = 74.7 bits (182),  Expect = 4e-12, Method: Compositional matrix adjust.
 Identities = 39/99 (40%), Positives = 56/99 (57%), Gaps = 1/99 (1%)

Query  1    MGATAITVLAGAHIVEMA-DAPMAIVTSGLVAGASVVFWAFGPWLIPPLVAASIWKHVVH  59
            MGA AI+ LAG+ ++  A  AP  +     + G +V +WA G W IP LV   IW+H V 
Sbjct  229  MGAMAISTLAGSLLILNAPQAPFLVSLLPFLKGFTVFYWASGTWWIPMLVLLGIWRHGVR  288

Query  60   RVPLRYEATLWSVVFPLGMYGVGAYRLGLAAHLPIVESI  98
            R PLRY+   W  VFPLGMY    +++  A     ++++
Sbjct  289  RFPLRYDPLYWGAVFPLGMYAACTWQMDKAMEFGFLDAL  327


>gi|222111971|ref|YP_002554235.1| c4-dicarboxylate transporter/malic acid transport protein [Acidovorax 
ebreus TPSY]
 gi|221731415|gb|ACM34235.1| C4-dicarboxylate transporter/malic acid transport protein [Acidovorax 
ebreus TPSY]
Length=356

 Score = 73.9 bits (180),  Expect = 7e-12, Method: Compositional matrix adjust.
 Identities = 47/126 (38%), Positives = 68/126 (54%), Gaps = 1/126 (0%)

Query  1    MGATAITVLAGAHIVEMA-DAPMAIVTSGLVAGASVVFWAFGPWLIPPLVAASIWKHVVH  59
            MGA AI+ LAG+ ++  A  AP  +     + G +V +WA G W IP LV   IW+H V 
Sbjct  228  MGAMAISTLAGSLLILNAPQAPFLVSLLPFLKGFTVFYWAAGTWWIPMLVLLGIWRHGVR  287

Query  60   RVPLRYEATLWSVVFPLGMYGVGAYRLGLAAHLPIVESIGEFEGWVALAVWTITFVAMLH  119
            R PLRY+   W  VFPLGMY    +++  A     ++++      VAL  W + F+ ML 
Sbjct  288  RFPLRYDPLYWGAVFPLGMYAACTWQMDQAMAFGFLDALPRLFFAVALLAWLLAFIGMLR  347

Query  120  HLAATI  125
             +A  +
Sbjct  348  SVARQL  353


>gi|326800091|ref|YP_004317910.1| C4-dicarboxylate transporter/malic acid transport protein [Sphingobacterium 
sp. 21]
 gi|326550855|gb|ADZ79240.1| C4-dicarboxylate transporter/malic acid transport protein [Sphingobacterium 
sp. 21]
Length=353

 Score = 73.2 bits (178),  Expect = 1e-11, Method: Compositional matrix adjust.
 Identities = 44/138 (32%), Positives = 75/138 (55%), Gaps = 8/138 (5%)

Query  1    MGATAITVLAGAHIVEMADAPMAIVTSGL--VAGASVVFWAFGPWLIPPLVAASIWKHVV  58
            MGATAI+ LAG+ ++ +     A ++  L  + G ++ +WA G W IP L+    W+H +
Sbjct  217  MGATAISTLAGSMLI-LHTGDFAFLSQILPFLKGFTLFYWAAGTWWIPLLLLLGFWRHAI  275

Query  59   HRVPL-----RYEATLWSVVFPLGMYGVGAYRLGLAAHLPIVESIGEFEGWVALAVWTIT  113
             RVP+      Y+ T W++VFPLGMY V  YRL  A  +  ++ I     ++AL  W   
Sbjct  276  KRVPVPTSAKGYDPTYWAMVFPLGMYTVCTYRLSEALSITFLKFIPAAFIYIALFAWVAV  335

Query  114  FVAMLHHLAATIGRSGRS  131
             +  + +L + + +  ++
Sbjct  336  ALGFIRYLLSLVQKETQT  353


>gi|196231244|ref|ZP_03130103.1| C4-dicarboxylate transporter/malic acid transport protein [Chthoniobacter 
flavus Ellin428]
 gi|196224580|gb|EDY19091.1| C4-dicarboxylate transporter/malic acid transport protein [Chthoniobacter 
flavus Ellin428]
Length=350

 Score = 72.8 bits (177),  Expect = 2e-11, Method: Compositional matrix adjust.
 Identities = 44/132 (34%), Positives = 69/132 (53%), Gaps = 2/132 (1%)

Query  1    MGATAITVLAGAHIVEM-ADAPMAIVTSGLVAGASVVFWAFGPWLIPPLVAASIWKHVVH  59
            MGA AIT LAG++++ + ++ P        + G +++ WA   W +P L     W+HVV 
Sbjct  218  MGAVAITALAGSNLMLLTSEWPGIADLRVFIKGMTMLAWAVATWWLPLLCIVGFWRHVVQ  277

Query  60   RVPLRYEATLWSVVFPLGMYGVGAYRLGLAAHLPIVESIGEFEGWVALAVWTITFVAMLH  119
            +V L Y+ + WS+VFPLGMY +    L  A + P +  + +     AL  W I F     
Sbjct  278  KVRLSYDPSYWSMVFPLGMYSLATATLAKAINFPWINWLSQLFLVFALLAWVIVFAGFGR  337

Query  120  HLAATI-GRSGR  130
             + A I G++ R
Sbjct  338  RVLAVIRGKAQR  349


>gi|77163619|ref|YP_342144.1| C4-dicarboxylate transporter/malic acid transport protein [Nitrosococcus 
oceani ATCC 19707]
 gi|76881933|gb|ABA56614.1| C4-dicarboxylate transporter/malic acid transport protein [Nitrosococcus 
oceani ATCC 19707]
Length=360

 Score = 71.6 bits (174),  Expect = 4e-11, Method: Compositional matrix adjust.
 Identities = 42/127 (34%), Positives = 65/127 (52%), Gaps = 1/127 (0%)

Query  1    MGATAITVLAGAHIV-EMADAPMAIVTSGLVAGASVVFWAFGPWLIPPLVAASIWKHVVH  59
            MGA AI+ L G+ +V   A+AP        + G ++ +WA   W IP L+  S+W++   
Sbjct  230  MGAMAISTLGGSLLVSNAANAPFLHSLLPFIKGFTLFYWATSTWWIPILLILSVWRYACM  289

Query  60   RVPLRYEATLWSVVFPLGMYGVGAYRLGLAAHLPIVESIGEFEGWVALAVWTITFVAMLH  119
            R+ L Y+   W VVFPLGMY   ++ +     L  +  +     + AL VW + FV+ + 
Sbjct  290  RLSLNYDPLHWGVVFPLGMYAASSHEMATVMALEFLSFLPPLFLYAALLVWVVVFVSWIL  349

Query  120  HLAATIG  126
             L   IG
Sbjct  350  TLLRRIG  356


>gi|86158186|ref|YP_464971.1| C4-dicarboxylate transporter/malic acid transport protein [Anaeromyxobacter 
dehalogenans 2CP-C]
 gi|85774697|gb|ABC81534.1| C4-dicarboxylate transporter/malic acid transport protein [Anaeromyxobacter 
dehalogenans 2CP-C]
Length=387

 Score = 70.9 bits (172),  Expect = 6e-11, Method: Compositional matrix adjust.
 Identities = 47/136 (35%), Positives = 69/136 (51%), Gaps = 2/136 (1%)

Query  1    MGATAITVLAGAHIVEMADAPMAI-VTSGLVAGASVVFWAFGPWLIPPLVAASIWKHV-V  58
            MGA AI+V+AG  +  +A     +      V G +++FWA   W IP LV   IW+H   
Sbjct  233  MGAVAISVVAGTSLAALAPGSAFLGALLPFVKGLTLMFWATATWWIPMLVLLGIWRHGGP  292

Query  59   HRVPLRYEATLWSVVFPLGMYGVGAYRLGLAAHLPIVESIGEFEGWVALAVWTITFVAML  118
             R+ + Y+   W +VFPLGMY +  YRLG    +P++  +      VALA W +T   + 
Sbjct  293  SRIRIAYDPLYWGLVFPLGMYALCTYRLGELFAMPVLPWVARTFATVALAAWLLTAFGLA  352

Query  119  HHLAATIGRSGRSSHA  134
                  +  + RS HA
Sbjct  353  GRFLQLVVLAVRSLHA  368


>gi|254436118|ref|ZP_05049625.1| C4-dicarboxylate transporter/malic acid transport protein [Nitrosococcus 
oceani AFC27]
 gi|207089229|gb|EDZ66501.1| C4-dicarboxylate transporter/malic acid transport protein [Nitrosococcus 
oceani AFC27]
Length=339

 Score = 70.5 bits (171),  Expect = 8e-11, Method: Compositional matrix adjust.
 Identities = 42/127 (34%), Positives = 65/127 (52%), Gaps = 1/127 (0%)

Query  1    MGATAITVLAGAHIV-EMADAPMAIVTSGLVAGASVVFWAFGPWLIPPLVAASIWKHVVH  59
            MGA AI+ L G+ +V   A+AP        + G ++ +WA   W IP L+  S+W++   
Sbjct  209  MGAMAISTLGGSLLVSNAANAPFLHSLLPFIKGFTLFYWATSTWWIPILLILSVWRYACM  268

Query  60   RVPLRYEATLWSVVFPLGMYGVGAYRLGLAAHLPIVESIGEFEGWVALAVWTITFVAMLH  119
            R+ L Y+   W VVFPLGMY   ++ +     L  +  +     + AL VW + FV+ + 
Sbjct  269  RLSLNYDPLHWGVVFPLGMYAASSHEMATVMALEFLSFLPPLFLYAALLVWVVVFVSWIL  328

Query  120  HLAATIG  126
             L   IG
Sbjct  329  TLLRRIG  335


>gi|56476536|ref|YP_158125.1| putative C4-dicarboxylate transporter [Aromatoleum aromaticum 
EbN1]
 gi|56312579|emb|CAI07224.1| putative C4-dicarboxylate transporter [Aromatoleum aromaticum 
EbN1]
Length=358

 Score = 70.5 bits (171),  Expect = 8e-11, Method: Compositional matrix adjust.
 Identities = 36/80 (45%), Positives = 48/80 (60%), Gaps = 1/80 (1%)

Query  1    MGATAITVLAGAHIVEMA-DAPMAIVTSGLVAGASVVFWAFGPWLIPPLVAASIWKHVVH  59
            MGA AI+ LAG+ ++  A DAP        + G +V +WA G W IP L+   +W+HV  
Sbjct  227  MGAMAISTLAGSLLIANAPDAPFLHSLLPFLKGFTVFYWATGTWWIPMLLILGLWRHVYK  286

Query  60   RVPLRYEATLWSVVFPLGMY  79
            R PL+Y+   W  VFPLGMY
Sbjct  287  RFPLKYDPLYWGAVFPLGMY  306



Lambda     K      H
   0.327    0.137    0.449 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 128736477480


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40