BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1738
Length=94
Score E
Sequences producing significant alignments: (Bits) Value
gi|289745822|ref|ZP_06505200.1| conserved hypothetical protein [... 194 3e-48
gi|148661537|ref|YP_001283060.1| hypothetical protein MRA_1749 [... 194 5e-48
gi|148822945|ref|YP_001287699.1| hypothetical protein TBFG_11756... 192 1e-47
gi|15841202|ref|NP_336239.1| hypothetical protein MT1780 [Mycoba... 192 1e-47
gi|15608876|ref|NP_216254.1| hypothetical protein Rv1738 [Mycoba... 192 1e-47
gi|289443201|ref|ZP_06432945.1| conserved hypothetical protein [... 149 1e-34
gi|289750297|ref|ZP_06509675.1| LOW QUALITY PROTEIN: conserved h... 148 3e-34
gi|289569795|ref|ZP_06450022.1| LOW QUALITY PROTEIN: conserved h... 147 4e-34
gi|9653922|gb|AAF93174.1| unknown [Mycobacterium bovis BCG] 119 2e-25
gi|15609769|ref|NP_217148.1| hypothetical protein Rv2632c [Mycob... 100 8e-20
gi|312139731|ref|YP_004007067.1| hypothetical protein REQ_23370 ... 100 1e-19
gi|325676818|ref|ZP_08156491.1| hypothetical protein HMPREF0724_... 99.4 1e-19
gi|340627653|ref|YP_004746105.1| hypothetical protein MCAN_26781... 99.0 2e-19
gi|90109355|pdb|2FGG|A Chain A, Crystal Structure Of Rv2632c 99.0 2e-19
gi|120402425|ref|YP_952254.1| hypothetical protein Mvan_1414 [My... 97.1 9e-19
gi|226306893|ref|YP_002766853.1| hypothetical protein RER_34060 ... 96.3 1e-18
gi|254232745|ref|ZP_04926072.1| conserved hypothetical protein [... 92.8 2e-17
gi|240170615|ref|ZP_04749274.1| hypothetical protein MkanA1_1497... 92.0 2e-17
gi|183982082|ref|YP_001850373.1| hypothetical protein MMAR_2068 ... 90.1 9e-17
gi|296170916|ref|ZP_06852453.1| conserved hypothetical protein [... 87.4 7e-16
gi|111017060|ref|YP_700032.1| hypothetical protein RHA1_ro00038 ... 86.3 1e-15
gi|118618617|ref|YP_906949.1| hypothetical protein MUL_3277 [Myc... 85.9 2e-15
gi|119714550|ref|YP_921515.1| hypothetical protein Noca_0283 [No... 84.7 4e-15
gi|134098988|ref|YP_001104649.1| hypothetical protein SACE_2426 ... 81.3 4e-14
gi|291006772|ref|ZP_06564745.1| hypothetical protein SeryN2_1980... 81.3 4e-14
gi|229818977|ref|YP_002880503.1| hypothetical protein Bcav_0478 ... 80.1 9e-14
gi|226366469|ref|YP_002784252.1| hypothetical protein ROP_70600 ... 77.8 4e-13
gi|271966199|ref|YP_003340395.1| hypothetical protein Sros_4833 ... 77.4 6e-13
gi|336178356|ref|YP_004583731.1| hypothetical protein FsymDg_243... 77.4 6e-13
gi|331698631|ref|YP_004334870.1| hypothetical protein Psed_4873 ... 73.2 1e-11
gi|345011497|ref|YP_004813851.1| hypothetical protein Strvi_3910... 70.5 7e-11
gi|328880396|emb|CCA53635.1| hypothetical protein SVEN_0348 [Str... 69.3 2e-10
gi|333918867|ref|YP_004492448.1| hypothetical protein AS9A_1196 ... 69.3 2e-10
gi|86740264|ref|YP_480664.1| hypothetical protein Francci3_1559 ... 69.3 2e-10
gi|254393777|ref|ZP_05008894.1| hypothetical protein SSCG_06180 ... 68.9 2e-10
gi|226359603|ref|YP_002777381.1| hypothetical protein ROP_01890 ... 67.8 6e-10
gi|291441659|ref|ZP_06581049.1| predicted protein [Streptomyces ... 67.0 8e-10
gi|297154474|gb|ADI04186.1| hypothetical protein SBI_01065 [Stre... 66.2 2e-09
gi|302539906|ref|ZP_07292248.1| conserved hypothetical protein [... 65.9 2e-09
gi|269127102|ref|YP_003300472.1| hypothetical protein Tcur_2889 ... 65.9 2e-09
gi|302557031|ref|ZP_07309373.1| conserved hypothetical protein [... 64.3 6e-09
gi|311895311|dbj|BAJ27719.1| hypothetical protein KSE_18950 [Kit... 62.4 2e-08
gi|226359502|ref|YP_002777279.1| hypothetical protein ROP_00870 ... 62.4 2e-08
gi|254381632|ref|ZP_04996996.1| hypothetical protein SSAG_01298 ... 58.5 3e-07
gi|294628509|ref|ZP_06707069.1| conserved hypothetical protein [... 57.0 1e-06
gi|337764661|emb|CCB73370.1| conserved protein of unknown functi... 56.6 1e-06
gi|72162361|ref|YP_290018.1| hypothetical protein Tfu_1962 [Ther... 56.6 1e-06
gi|332670397|ref|YP_004453405.1| hypothetical protein Celf_1888 ... 55.1 3e-06
gi|297560903|ref|YP_003679877.1| hypothetical protein Ndas_1944 ... 55.1 3e-06
gi|345011290|ref|YP_004813644.1| hypothetical protein Strvi_3699... 53.9 8e-06
>gi|289745822|ref|ZP_06505200.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|289686350|gb|EFD53838.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
Length=121
Score = 194 bits (493), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 94/94 (100%), Positives = 94/94 (100%), Gaps = 0/94 (0%)
Query 1 MCGDQSDHVLQHWTVDISIDEHEGLTRAKARLRWREKELVGVGLARLNPADRNVPEIGDE 60
MCGDQSDHVLQHWTVDISIDEHEGLTRAKARLRWREKELVGVGLARLNPADRNVPEIGDE
Sbjct 28 MCGDQSDHVLQHWTVDISIDEHEGLTRAKARLRWREKELVGVGLARLNPADRNVPEIGDE 87
Query 61 LSVARALSDLGKRMLKVSTHDIEAVTHQPARLLY 94
LSVARALSDLGKRMLKVSTHDIEAVTHQPARLLY
Sbjct 88 LSVARALSDLGKRMLKVSTHDIEAVTHQPARLLY 121
>gi|148661537|ref|YP_001283060.1| hypothetical protein MRA_1749 [Mycobacterium tuberculosis H37Ra]
gi|167968648|ref|ZP_02550925.1| hypothetical protein MtubH3_11653 [Mycobacterium tuberculosis
H37Ra]
gi|254231931|ref|ZP_04925258.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
24 more sequence titles
Length=110
Score = 194 bits (492), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 94/94 (100%), Positives = 94/94 (100%), Gaps = 0/94 (0%)
Query 1 MCGDQSDHVLQHWTVDISIDEHEGLTRAKARLRWREKELVGVGLARLNPADRNVPEIGDE 60
MCGDQSDHVLQHWTVDISIDEHEGLTRAKARLRWREKELVGVGLARLNPADRNVPEIGDE
Sbjct 17 MCGDQSDHVLQHWTVDISIDEHEGLTRAKARLRWREKELVGVGLARLNPADRNVPEIGDE 76
Query 61 LSVARALSDLGKRMLKVSTHDIEAVTHQPARLLY 94
LSVARALSDLGKRMLKVSTHDIEAVTHQPARLLY
Sbjct 77 LSVARALSDLGKRMLKVSTHDIEAVTHQPARLLY 110
>gi|148822945|ref|YP_001287699.1| hypothetical protein TBFG_11756 [Mycobacterium tuberculosis F11]
gi|148721472|gb|ABR06097.1| conserved hypothetical protein [Mycobacterium tuberculosis F11]
Length=153
Score = 192 bits (489), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 94/94 (100%), Positives = 94/94 (100%), Gaps = 0/94 (0%)
Query 1 MCGDQSDHVLQHWTVDISIDEHEGLTRAKARLRWREKELVGVGLARLNPADRNVPEIGDE 60
MCGDQSDHVLQHWTVDISIDEHEGLTRAKARLRWREKELVGVGLARLNPADRNVPEIGDE
Sbjct 60 MCGDQSDHVLQHWTVDISIDEHEGLTRAKARLRWREKELVGVGLARLNPADRNVPEIGDE 119
Query 61 LSVARALSDLGKRMLKVSTHDIEAVTHQPARLLY 94
LSVARALSDLGKRMLKVSTHDIEAVTHQPARLLY
Sbjct 120 LSVARALSDLGKRMLKVSTHDIEAVTHQPARLLY 153
>gi|15841202|ref|NP_336239.1| hypothetical protein MT1780 [Mycobacterium tuberculosis CDC1551]
gi|253799220|ref|YP_003032221.1| hypothetical protein TBMG_02257 [Mycobacterium tuberculosis KZN
1435]
gi|289554488|ref|ZP_06443698.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
605]
6 more sequence titles
Length=153
Score = 192 bits (489), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 94/94 (100%), Positives = 94/94 (100%), Gaps = 0/94 (0%)
Query 1 MCGDQSDHVLQHWTVDISIDEHEGLTRAKARLRWREKELVGVGLARLNPADRNVPEIGDE 60
MCGDQSDHVLQHWTVDISIDEHEGLTRAKARLRWREKELVGVGLARLNPADRNVPEIGDE
Sbjct 60 MCGDQSDHVLQHWTVDISIDEHEGLTRAKARLRWREKELVGVGLARLNPADRNVPEIGDE 119
Query 61 LSVARALSDLGKRMLKVSTHDIEAVTHQPARLLY 94
LSVARALSDLGKRMLKVSTHDIEAVTHQPARLLY
Sbjct 120 LSVARALSDLGKRMLKVSTHDIEAVTHQPARLLY 153
>gi|15608876|ref|NP_216254.1| hypothetical protein Rv1738 [Mycobacterium tuberculosis H37Rv]
gi|31792926|ref|NP_855419.1| hypothetical protein Mb1767 [Mycobacterium bovis AF2122/97]
gi|121637646|ref|YP_977869.1| hypothetical protein BCG_1777 [Mycobacterium bovis BCG str. Pasteur
1173P2]
36 more sequence titles
Length=94
Score = 192 bits (488), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 94/94 (100%), Positives = 94/94 (100%), Gaps = 0/94 (0%)
Query 1 MCGDQSDHVLQHWTVDISIDEHEGLTRAKARLRWREKELVGVGLARLNPADRNVPEIGDE 60
MCGDQSDHVLQHWTVDISIDEHEGLTRAKARLRWREKELVGVGLARLNPADRNVPEIGDE
Sbjct 1 MCGDQSDHVLQHWTVDISIDEHEGLTRAKARLRWREKELVGVGLARLNPADRNVPEIGDE 60
Query 61 LSVARALSDLGKRMLKVSTHDIEAVTHQPARLLY 94
LSVARALSDLGKRMLKVSTHDIEAVTHQPARLLY
Sbjct 61 LSVARALSDLGKRMLKVSTHDIEAVTHQPARLLY 94
>gi|289443201|ref|ZP_06432945.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
gi|289416120|gb|EFD13360.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
Length=116
Score = 149 bits (376), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/72 (100%), Positives = 72/72 (100%), Gaps = 0/72 (0%)
Query 1 MCGDQSDHVLQHWTVDISIDEHEGLTRAKARLRWREKELVGVGLARLNPADRNVPEIGDE 60
MCGDQSDHVLQHWTVDISIDEHEGLTRAKARLRWREKELVGVGLARLNPADRNVPEIGDE
Sbjct 17 MCGDQSDHVLQHWTVDISIDEHEGLTRAKARLRWREKELVGVGLARLNPADRNVPEIGDE 76
Query 61 LSVARALSDLGK 72
LSVARALSDLGK
Sbjct 77 LSVARALSDLGK 88
>gi|289750297|ref|ZP_06509675.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Mycobacterium
tuberculosis T92]
gi|289690884|gb|EFD58313.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Mycobacterium
tuberculosis T92]
Length=95
Score = 148 bits (373), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 72/72 (100%), Positives = 72/72 (100%), Gaps = 0/72 (0%)
Query 1 MCGDQSDHVLQHWTVDISIDEHEGLTRAKARLRWREKELVGVGLARLNPADRNVPEIGDE 60
MCGDQSDHVLQHWTVDISIDEHEGLTRAKARLRWREKELVGVGLARLNPADRNVPEIGDE
Sbjct 1 MCGDQSDHVLQHWTVDISIDEHEGLTRAKARLRWREKELVGVGLARLNPADRNVPEIGDE 60
Query 61 LSVARALSDLGK 72
LSVARALSDLGK
Sbjct 61 LSVARALSDLGK 72
>gi|289569795|ref|ZP_06450022.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Mycobacterium
tuberculosis T17]
gi|289543549|gb|EFD47197.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Mycobacterium
tuberculosis T17]
Length=72
Score = 147 bits (372), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 72/72 (100%), Positives = 72/72 (100%), Gaps = 0/72 (0%)
Query 1 MCGDQSDHVLQHWTVDISIDEHEGLTRAKARLRWREKELVGVGLARLNPADRNVPEIGDE 60
MCGDQSDHVLQHWTVDISIDEHEGLTRAKARLRWREKELVGVGLARLNPADRNVPEIGDE
Sbjct 1 MCGDQSDHVLQHWTVDISIDEHEGLTRAKARLRWREKELVGVGLARLNPADRNVPEIGDE 60
Query 61 LSVARALSDLGK 72
LSVARALSDLGK
Sbjct 61 LSVARALSDLGK 72
>gi|9653922|gb|AAF93174.1| unknown [Mycobacterium bovis BCG]
Length=56
Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/56 (100%), Positives = 56/56 (100%), Gaps = 0/56 (0%)
Query 1 MCGDQSDHVLQHWTVDISIDEHEGLTRAKARLRWREKELVGVGLARLNPADRNVPE 56
MCGDQSDHVLQHWTVDISIDEHEGLTRAKARLRWREKELVGVGLARLNPADRNVPE
Sbjct 1 MCGDQSDHVLQHWTVDISIDEHEGLTRAKARLRWREKELVGVGLARLNPADRNVPE 56
>gi|15609769|ref|NP_217148.1| hypothetical protein Rv2632c [Mycobacterium tuberculosis H37Rv]
gi|15842172|ref|NP_337209.1| hypothetical protein MT2708 [Mycobacterium tuberculosis CDC1551]
gi|31793818|ref|NP_856311.1| hypothetical protein Mb2665c [Mycobacterium bovis AF2122/97]
75 more sequence titles
Length=93
Score = 100 bits (249), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 48/89 (54%), Positives = 67/89 (76%), Gaps = 0/89 (0%)
Query 6 SDHVLQHWTVDISIDEHEGLTRAKARLRWREKELVGVGLARLNPADRNVPEIGDELSVAR 65
S+HV + +D+ I+EH+ TRAKARL W +++VGVGLARL+PAD V +IGDEL++AR
Sbjct 4 SEHVGKTCQIDVLIEEHDERTRAKARLSWAGRQMVGVGLARLDPADEPVAQIGDELAIAR 63
Query 66 ALSDLGKRMLKVSTHDIEAVTHQPARLLY 94
ALSDL ++ +++ DIEA THQP L+
Sbjct 64 ALSDLANQLFALTSSDIEASTHQPVTGLH 92
>gi|312139731|ref|YP_004007067.1| hypothetical protein REQ_23370 [Rhodococcus equi 103S]
gi|311889070|emb|CBH48383.1| hypothetical protein REQ_23370 [Rhodococcus equi 103S]
Length=87
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/82 (60%), Positives = 61/82 (75%), Gaps = 0/82 (0%)
Query 11 QHWTVDISIDEHEGLTRAKARLRWREKELVGVGLARLNPADRNVPEIGDELSVARALSDL 70
++W+VDISIDEH+ TR+ ARL E +VGVGLAR NP DRNVP IGDEL+ ARAL+DL
Sbjct 4 KNWSVDISIDEHDAQTRSTARLHTVESTIVGVGLARRNPVDRNVPSIGDELATARALADL 63
Query 71 GKRMLKVSTHDIEAVTHQPARL 92
+++ + DIEAVTH A L
Sbjct 64 AHQLIDSTVGDIEAVTHARAHL 85
>gi|325676818|ref|ZP_08156491.1| hypothetical protein HMPREF0724_14274 [Rhodococcus equi ATCC
33707]
gi|325552366|gb|EGD22055.1| hypothetical protein HMPREF0724_14274 [Rhodococcus equi ATCC
33707]
Length=87
Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/82 (60%), Positives = 61/82 (75%), Gaps = 0/82 (0%)
Query 11 QHWTVDISIDEHEGLTRAKARLRWREKELVGVGLARLNPADRNVPEIGDELSVARALSDL 70
++W+VDISIDEH+ TR+ ARL E +VGVGLAR NP DRNVP IGDEL+ ARAL+DL
Sbjct 4 KNWSVDISIDEHDTQTRSTARLHTVESTIVGVGLARRNPVDRNVPSIGDELATARALADL 63
Query 71 GKRMLKVSTHDIEAVTHQPARL 92
+++ + DIEAVTH A L
Sbjct 64 AHQLIDSTVGDIEAVTHARAHL 85
>gi|340627653|ref|YP_004746105.1| hypothetical protein MCAN_26781 [Mycobacterium canettii CIPT
140010059]
gi|340005843|emb|CCC45009.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=93
Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/89 (53%), Positives = 67/89 (76%), Gaps = 0/89 (0%)
Query 6 SDHVLQHWTVDISIDEHEGLTRAKARLRWREKELVGVGLARLNPADRNVPEIGDELSVAR 65
++HV + +D+ I+EH+ TRAKARL W +++VGVGLARL+PAD V +IGDEL++AR
Sbjct 4 NEHVGKTCQIDVLIEEHDERTRAKARLSWAGRQMVGVGLARLDPADEPVAQIGDELAIAR 63
Query 66 ALSDLGKRMLKVSTHDIEAVTHQPARLLY 94
ALSDL ++ +++ DIEA THQP L+
Sbjct 64 ALSDLANQLFALTSSDIEASTHQPVTGLH 92
>gi|90109355|pdb|2FGG|A Chain A, Crystal Structure Of Rv2632c
Length=101
Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/84 (56%), Positives = 64/84 (77%), Gaps = 0/84 (0%)
Query 6 SDHVLQHWTVDISIDEHEGLTRAKARLRWREKELVGVGLARLNPADRNVPEIGDELSVAR 65
S+HV + +D+ I+EH+ TRAKARL W ++ VGVGLARL+PAD V +IGDEL++AR
Sbjct 4 SEHVGKTCQIDVLIEEHDERTRAKARLSWAGRQXVGVGLARLDPADEPVAQIGDELAIAR 63
Query 66 ALSDLGKRMLKVSTHDIEAVTHQP 89
ALSDL ++ +++ DIEA THQP
Sbjct 64 ALSDLANQLFALTSSDIEASTHQP 87
>gi|120402425|ref|YP_952254.1| hypothetical protein Mvan_1414 [Mycobacterium vanbaalenii PYR-1]
gi|119955243|gb|ABM12248.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=92
Score = 97.1 bits (240), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 46/78 (59%), Positives = 60/78 (77%), Gaps = 0/78 (0%)
Query 11 QHWTVDISIDEHEGLTRAKARLRWREKELVGVGLARLNPADRNVPEIGDELSVARALSDL 70
+ WTV +++DEHE TRA A L W E+++ GVGLAR NP D +VP IGDEL+VARALSDL
Sbjct 9 KEWTVGVAVDEHEDQTRATAWLVWDERDVTGVGLARRNPKDEDVPVIGDELAVARALSDL 68
Query 71 GKRMLKVSTHDIEAVTHQ 88
+++L V+ DIE VTH+
Sbjct 69 ARQLLAVTARDIEGVTHE 86
>gi|226306893|ref|YP_002766853.1| hypothetical protein RER_34060 [Rhodococcus erythropolis PR4]
gi|226186010|dbj|BAH34114.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
Length=92
Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/87 (59%), Positives = 67/87 (78%), Gaps = 5/87 (5%)
Query 11 QHWTVDISIDEH---EG-LTRAKARLRWRE-KELVGVGLARLNPADRNVPEIGDELSVAR 65
+HWTVDI+IDEH EG TRA ARLR R+ +VG G AR NP+D +VPEIGDEL+VAR
Sbjct 4 KHWTVDITIDEHTAEEGNRTRAIARLRSRDDTHIVGSGFARCNPSDHDVPEIGDELAVAR 63
Query 66 ALSDLGKRMLKVSTHDIEAVTHQPARL 92
ALS L +++++ + D+E+VTH+PA L
Sbjct 64 ALSHLARQLIEATAADLESVTHEPAHL 90
>gi|254232745|ref|ZP_04926072.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
gi|124601804|gb|EAY60814.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
gi|323718784|gb|EGB27942.1| hypothetical protein TMMG_02644 [Mycobacterium tuberculosis CDC1551A]
Length=79
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/76 (58%), Positives = 59/76 (78%), Gaps = 0/76 (0%)
Query 19 IDEHEGLTRAKARLRWREKELVGVGLARLNPADRNVPEIGDELSVARALSDLGKRMLKVS 78
I+EH+ TRAKARL W +++VGVGLARL+PAD V +IGDEL++ARALSDL ++ ++
Sbjct 3 IEEHDERTRAKARLSWAGRQMVGVGLARLDPADEPVAQIGDELAIARALSDLANQLFALT 62
Query 79 THDIEAVTHQPARLLY 94
+ DIEA THQP L+
Sbjct 63 SSDIEASTHQPVTGLH 78
>gi|240170615|ref|ZP_04749274.1| hypothetical protein MkanA1_14975 [Mycobacterium kansasii ATCC
12478]
Length=96
Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/80 (58%), Positives = 60/80 (75%), Gaps = 0/80 (0%)
Query 15 VDISIDEHEGLTRAKARLRWREKELVGVGLARLNPADRNVPEIGDELSVARALSDLGKRM 74
VD+ I+E + TRAKARL W + LVGVGLARL+PAD V EIGDEL++ARAL+DL ++
Sbjct 16 VDVLIEERDERTRAKARLVWGDHTLVGVGLARLDPADEPVAEIGDELAIARALTDLANQL 75
Query 75 LKVSTHDIEAVTHQPARLLY 94
V++ DI+A THQP L+
Sbjct 76 FAVTSADIQASTHQPVTGLH 95
>gi|183982082|ref|YP_001850373.1| hypothetical protein MMAR_2068 [Mycobacterium marinum M]
gi|183175408|gb|ACC40518.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=93
Score = 90.1 bits (222), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 46/94 (49%), Positives = 66/94 (71%), Gaps = 2/94 (2%)
Query 1 MCGDQSDHVLQHWTVDISIDEHEGLTRAKARLRWREKELVGVGLARLNPADRNVPEIGDE 60
M G+ ++ H VD+ I+E + TRAKARL W ++ LVG+GLARL+PAD V +IGDE
Sbjct 1 MTGNTTNAKSCH--VDVLIEERDERTRAKARLVWGDQTLVGIGLARLDPADEPVAQIGDE 58
Query 61 LSVARALSDLGKRMLKVSTHDIEAVTHQPARLLY 94
L++ARALSDL ++ ++ DI+A TH+P L+
Sbjct 59 LAIARALSDLANQLFAATSADIQASTHEPVSGLH 92
>gi|296170916|ref|ZP_06852453.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295894465|gb|EFG74209.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=93
Score = 87.4 bits (215), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/90 (49%), Positives = 60/90 (67%), Gaps = 0/90 (0%)
Query 5 QSDHVLQHWTVDISIDEHEGLTRAKARLRWREKELVGVGLARLNPADRNVPEIGDELSVA 64
+SD + +D+ ++E E TRAKARL W LVGVG+ARL+PAD V IGDEL+VA
Sbjct 3 KSDQGTKSCHIDVLVEEREEKTRAKARLSWAGSTLVGVGVARLDPADPPVAAIGDELAVA 62
Query 65 RALSDLGKRMLKVSTHDIEAVTHQPARLLY 94
RAL DL ++ ++ DI+A TH+P L+
Sbjct 63 RALYDLANQLFAATSTDIQASTHEPVTGLH 92
>gi|111017060|ref|YP_700032.1| hypothetical protein RHA1_ro00038 [Rhodococcus jostii RHA1]
gi|110816590|gb|ABG91874.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=93
Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/86 (54%), Positives = 61/86 (71%), Gaps = 6/86 (6%)
Query 13 WTVDISIDEHEG-----LTRAKARLRWREKE-LVGVGLARLNPADRNVPEIGDELSVARA 66
W+V+I IDEH+ TRA+ARLR R+ LVGVGLAR NPAD +PEIGDEL+ ARA
Sbjct 6 WSVEIVIDEHDADEGGSRTRAQARLRTRDTHTLVGVGLARRNPADTEIPEIGDELATARA 65
Query 67 LSDLGKRMLKVSTHDIEAVTHQPARL 92
L+DL ++++++ D+EA TH L
Sbjct 66 LADLAHQLIELTAADVEAATHSRVHL 91
>gi|118618617|ref|YP_906949.1| hypothetical protein MUL_3277 [Mycobacterium ulcerans Agy99]
gi|118570727|gb|ABL05478.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=93
Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/94 (48%), Positives = 65/94 (70%), Gaps = 2/94 (2%)
Query 1 MCGDQSDHVLQHWTVDISIDEHEGLTRAKARLRWREKELVGVGLARLNPADRNVPEIGDE 60
M G+ ++ H VD+ I+E + TRAKARL W ++ LVG+GLARL+ AD V +IGDE
Sbjct 1 MTGNTTNAKSCH--VDVLIEERDERTRAKARLVWGDQTLVGIGLARLDRADEPVAQIGDE 58
Query 61 LSVARALSDLGKRMLKVSTHDIEAVTHQPARLLY 94
L++ARALSDL ++ ++ DI+A TH+P L+
Sbjct 59 LAIARALSDLANQLFAATSADIQASTHEPVSGLH 92
>gi|119714550|ref|YP_921515.1| hypothetical protein Noca_0283 [Nocardioides sp. JS614]
gi|119535211|gb|ABL79828.1| hypothetical protein Noca_0283 [Nocardioides sp. JS614]
Length=109
Score = 84.7 bits (208), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/84 (54%), Positives = 58/84 (70%), Gaps = 2/84 (2%)
Query 13 WTVDISIDEHEGLTRAKARLRWREKE--LVGVGLARLNPADRNVPEIGDELSVARALSDL 70
W+V+I I EH+G TRA+ARL L G G+ARLNPAD VPEIGDEL+ ARAL+DL
Sbjct 26 WSVEIFIGEHDGQTRAEARLATEPSATRLTGWGIARLNPADPEVPEIGDELATARALADL 85
Query 71 GKRMLKVSTHDIEAVTHQPARLLY 94
++L+ + DI AVT +P L +
Sbjct 86 AHQLLETAAVDIGAVTSKPVHLTH 109
>gi|134098988|ref|YP_001104649.1| hypothetical protein SACE_2426 [Saccharopolyspora erythraea NRRL
2338]
gi|133911611|emb|CAM01724.1| hypothetical protein SACE_2426 [Saccharopolyspora erythraea NRRL
2338]
Length=89
Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/83 (52%), Positives = 58/83 (70%), Gaps = 1/83 (1%)
Query 11 QHWTVDISIDEHEGLTRAKARLRWRE-KELVGVGLARLNPADRNVPEIGDELSVARALSD 69
+HW+VDI +DE E T A+ARL R+ +L G GLA+ NP DR+VPEIG EL+ ARAL +
Sbjct 5 EHWSVDIYLDEDEERTHAEARLHTRDATDLRGRGLAKRNPHDRDVPEIGAELAAARALFE 64
Query 70 LGKRMLKVSTHDIEAVTHQPARL 92
L +L+ +T D+E T +PA L
Sbjct 65 LAHHLLRAATEDVEQATGRPAHL 87
>gi|291006772|ref|ZP_06564745.1| hypothetical protein SeryN2_19808 [Saccharopolyspora erythraea
NRRL 2338]
Length=103
Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/83 (52%), Positives = 58/83 (70%), Gaps = 1/83 (1%)
Query 11 QHWTVDISIDEHEGLTRAKARLRWRE-KELVGVGLARLNPADRNVPEIGDELSVARALSD 69
+HW+VDI +DE E T A+ARL R+ +L G GLA+ NP DR+VPEIG EL+ ARAL +
Sbjct 19 EHWSVDIYLDEDEERTHAEARLHTRDATDLRGRGLAKRNPHDRDVPEIGAELAAARALFE 78
Query 70 LGKRMLKVSTHDIEAVTHQPARL 92
L +L+ +T D+E T +PA L
Sbjct 79 LAHHLLRAATEDVEQATGRPAHL 101
>gi|229818977|ref|YP_002880503.1| hypothetical protein Bcav_0478 [Beutenbergia cavernae DSM 12333]
gi|229564890|gb|ACQ78741.1| Domain of unknown function DUF1876 [Beutenbergia cavernae DSM
12333]
Length=89
Score = 80.1 bits (196), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 41/83 (50%), Positives = 57/83 (69%), Gaps = 1/83 (1%)
Query 11 QHWTVDISIDEHEGLTRAKARLRWRE-KELVGVGLARLNPADRNVPEIGDELSVARALSD 69
+HW++ + IDEH+ TRA+ARL +E+ G+G A+ NP D +VPEIGDEL+VARAL +
Sbjct 5 KHWSIAVEIDEHDDTTRAQARLETAAGREVRGLGHAQRNPLDASVPEIGDELAVARALRN 64
Query 70 LGKRMLKVSTHDIEAVTHQPARL 92
L +L + DIE T +PA L
Sbjct 65 LADHLLHTTEKDIEGATGEPAHL 87
>gi|226366469|ref|YP_002784252.1| hypothetical protein ROP_70600 [Rhodococcus opacus B4]
gi|226244959|dbj|BAH55307.1| hypothetical protein [Rhodococcus opacus B4]
Length=93
Score = 77.8 bits (190), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/82 (49%), Positives = 56/82 (69%), Gaps = 6/82 (7%)
Query 13 WTVDISIDEHEG-----LTRAKARLRWRE-KELVGVGLARLNPADRNVPEIGDELSVARA 66
W V++ IDEH+ TRA+ARLR R+ + VG GLAR NP D +PEIG+EL+ ARA
Sbjct 6 WLVEVVIDEHDSDEGGSRTRAQARLRTRDTRTFVGSGLARRNPDDTEIPEIGEELATARA 65
Query 67 LSDLGKRMLKVSTHDIEAVTHQ 88
LSDL ++++ + D+E+ TH
Sbjct 66 LSDLAHQLIEATAADVESATHS 87
>gi|271966199|ref|YP_003340395.1| hypothetical protein Sros_4833 [Streptosporangium roseum DSM
43021]
gi|270509374|gb|ACZ87652.1| hypothetical protein Sros_4833 [Streptosporangium roseum DSM
43021]
Length=85
Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/77 (55%), Positives = 52/77 (68%), Gaps = 1/77 (1%)
Query 11 QHWTVDISIDEHEGLTRAKARLRWREK-ELVGVGLARLNPADRNVPEIGDELSVARALSD 69
+ WTV + I E T A+A L R+K + GVG AR NPAD+ PEIGDEL+VARALSD
Sbjct 4 KQWTVQVYITEEGDDTSARAVLSTRDKTRITGVGHARRNPADQPAPEIGDELAVARALSD 63
Query 70 LGKRMLKVSTHDIEAVT 86
LG R+L V++ DI T
Sbjct 64 LGNRLLTVTSEDIAQFT 80
>gi|336178356|ref|YP_004583731.1| hypothetical protein FsymDg_2432 [Frankia symbiont of Datisca
glomerata]
gi|334859336|gb|AEH09810.1| Domain of unknown function DUF1876 [Frankia symbiont of Datisca
glomerata]
Length=102
Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/85 (52%), Positives = 58/85 (69%), Gaps = 5/85 (5%)
Query 13 WTVDISIDEHEGLTRAKARLRW-----REKELVGVGLARLNPADRNVPEIGDELSVARAL 67
WTVD+ + E +G TRA+A LR E+EL GVG AR +PAD +P+IGDE++ +RAL
Sbjct 7 WTVDVLLTEDDGHTRAEAALRPGPRSDSERELRGVGHARRHPADAEIPKIGDEVAASRAL 66
Query 68 SDLGKRMLKVSTHDIEAVTHQPARL 92
S+L +L V+ IEAVTHQ A L
Sbjct 67 SELAHLLLDVAAGHIEAVTHQTAHL 91
>gi|331698631|ref|YP_004334870.1| hypothetical protein Psed_4873 [Pseudonocardia dioxanivorans
CB1190]
gi|326953320|gb|AEA27017.1| Domain of unknown function DUF1876 [Pseudonocardia dioxanivorans
CB1190]
Length=87
Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/59 (65%), Positives = 44/59 (75%), Gaps = 1/59 (1%)
Query 8 HVLQHWTVDISIDEHEGLTRAKARLRWRE-KELVGVGLARLNPADRNVPEIGDELSVAR 65
H + W V + IDEHEG TRA A L R+ + L G GLARLNPADR+VPEIGDEL+VAR
Sbjct 2 HEAKRWNVTLDIDEHEGRTRAVAHLHTRDARSLTGEGLARLNPADRDVPEIGDELAVAR 60
>gi|345011497|ref|YP_004813851.1| hypothetical protein Strvi_3910 [Streptomyces violaceusniger
Tu 4113]
gi|344037846|gb|AEM83571.1| Domain of unknown function DUF1876 [Streptomyces violaceusniger
Tu 4113]
Length=96
Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/78 (48%), Positives = 49/78 (63%), Gaps = 0/78 (0%)
Query 13 WTVDISIDEHEGLTRAKARLRWREKELVGVGLARLNPADRNVPEIGDELSVARALSDLGK 72
W V + + E EG T A+ L L G GLAR NP D +VP IGDEL+ ARALSDLG+
Sbjct 7 WRVHLYLSEDEGRTMARVELDTGSAALTGRGLARCNPDDEDVPVIGDELAAARALSDLGQ 66
Query 73 RMLKVSTHDIEAVTHQPA 90
+++ + D+E+V PA
Sbjct 67 QLVHAAERDLESVGAPPA 84
>gi|328880396|emb|CCA53635.1| hypothetical protein SVEN_0348 [Streptomyces venezuelae ATCC
10712]
Length=99
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/74 (45%), Positives = 49/74 (67%), Gaps = 0/74 (0%)
Query 12 HWTVDISIDEHEGLTRAKARLRWREKELVGVGLARLNPADRNVPEIGDELSVARALSDLG 71
WTV + + E +G T+A+ARL L G G AR NPAD +VP IGDEL+ +RA+ DL
Sbjct 6 EWTVGVELVEEDGTTKAEARLLTGNSNLTGHGSARCNPADVDVPAIGDELAASRAMKDLA 65
Query 72 KRMLKVSTHDIEAV 85
++++ + ++EAV
Sbjct 66 GKLMREANREMEAV 79
>gi|333918867|ref|YP_004492448.1| hypothetical protein AS9A_1196 [Amycolicicoccus subflavus DQS3-9A1]
gi|333481088|gb|AEF39648.1| hypothetical protein AS9A_1196 [Amycolicicoccus subflavus DQS3-9A1]
Length=89
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/84 (53%), Positives = 61/84 (73%), Gaps = 2/84 (2%)
Query 11 QHWTVDISIDEHEGLTRAKARLRWRE--KELVGVGLARLNPADRNVPEIGDELSVARALS 68
+HW+V+I IDE G T A+ARL E ++LVG G+AR NP DR+VP IGDEL+ ARAL+
Sbjct 4 KHWSVEILIDERNGQTHAEARLHADEGSRKLVGTGVARKNPDDRDVPLIGDELAAARALA 63
Query 69 DLGKRMLKVSTHDIEAVTHQPARL 92
DL ++++ + DIE+ TH PA +
Sbjct 64 DLSHQLIEQTASDIESSTHVPAHV 87
>gi|86740264|ref|YP_480664.1| hypothetical protein Francci3_1559 [Frankia sp. CcI3]
gi|86567126|gb|ABD10935.1| conserved hypothetical protein [Frankia sp. CcI3]
Length=88
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/82 (44%), Positives = 51/82 (63%), Gaps = 1/82 (1%)
Query 13 WTVDISIDEHEGLTRAKARLRWREKE-LVGVGLARLNPADRNVPEIGDELSVARALSDLG 71
WTV IS+ E G T+A A L ++ L G G ARL+P + +VPEIGDE++ ARALS+L
Sbjct 7 WTVQISLTEQHGRTQADAALHGSARDDLHGTGQARLHPGESDVPEIGDEVAAARALSELA 66
Query 72 KRMLKVSTHDIEAVTHQPARLL 93
R+ + +I+A P R +
Sbjct 67 HRLFDAAAENIQAAMAGPDRTM 88
>gi|254393777|ref|ZP_05008894.1| hypothetical protein SSCG_06180 [Streptomyces clavuligerus ATCC
27064]
gi|294814612|ref|ZP_06773255.1| DUF1876 domain-containing protein [Streptomyces clavuligerus
ATCC 27064]
gi|326442998|ref|ZP_08217732.1| hypothetical protein SclaA2_18123 [Streptomyces clavuligerus
ATCC 27064]
gi|197707381|gb|EDY53193.1| hypothetical protein SSCG_06180 [Streptomyces clavuligerus ATCC
27064]
gi|294327211|gb|EFG08854.1| DUF1876 domain-containing protein [Streptomyces clavuligerus
ATCC 27064]
Length=101
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/81 (41%), Positives = 50/81 (62%), Gaps = 0/81 (0%)
Query 10 LQHWTVDISIDEHEGLTRAKARLRWREKELVGVGLARLNPADRNVPEIGDELSVARALSD 69
++ WTV + + E +G T A+A L L G G A NP D ++P+IG+EL+ RA+ D
Sbjct 5 IREWTVGLQLVEEDGTTTARAVLDTGTATLTGRGAAHCNPQDVDIPQIGEELAAGRAMRD 64
Query 70 LGKRMLKVSTHDIEAVTHQPA 90
L R+++ + HD+EAV PA
Sbjct 65 LSGRLMRAADHDLEAVGAGPA 85
>gi|226359603|ref|YP_002777381.1| hypothetical protein ROP_01890 [Rhodococcus opacus B4]
gi|226238088|dbj|BAH48436.1| hypothetical protein [Rhodococcus opacus B4]
Length=114
Score = 67.8 bits (164), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/82 (47%), Positives = 54/82 (66%), Gaps = 6/82 (7%)
Query 13 WTVDISIDEH---EGLTR--AKARLRWRE-KELVGVGLARLNPADRNVPEIGDELSVARA 66
W V++ +DEH EG +R A+ARLR R+ + VG GLAR NP D + EIG+ L+ ARA
Sbjct 27 WLVEVVVDEHDSDEGGSRIRAQARLRTRDTRTFVGSGLARRNPDDAEISEIGEVLATARA 86
Query 67 LSDLGKRMLKVSTHDIEAVTHQ 88
LSDL ++++ + D+E TH
Sbjct 87 LSDLAHQLIEATAADVETATHS 108
>gi|291441659|ref|ZP_06581049.1| predicted protein [Streptomyces ghanaensis ATCC 14672]
gi|291344554|gb|EFE71510.1| predicted protein [Streptomyces ghanaensis ATCC 14672]
Length=94
Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/73 (44%), Positives = 49/73 (68%), Gaps = 0/73 (0%)
Query 13 WTVDISIDEHEGLTRAKARLRWREKELVGVGLARLNPADRNVPEIGDELSVARALSDLGK 72
W V + + E G T+A+A + +EL G G+A NPAD +VPEIGDEL+ RA+ DLG+
Sbjct 7 WKVRLHLFEDGGTTKARAVIDTGTRELTGHGVAHRNPADTDVPEIGDELAAGRAMQDLGR 66
Query 73 RMLKVSTHDIEAV 85
++++++ DIE
Sbjct 67 QLVEIAERDIEGT 79
>gi|297154474|gb|ADI04186.1| hypothetical protein SBI_01065 [Streptomyces bingchenggensis
BCW-1]
Length=95
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/79 (44%), Positives = 48/79 (61%), Gaps = 2/79 (2%)
Query 13 WTVDISIDEHEGLTRAKARLRWREKELVGVGLARLNPADRNVPEIGDELSVARALSDLGK 72
W V + + E +G T+A+ L E G G+AR +P D VPEIGDEL+ RA+ DLG+
Sbjct 7 WKVHLYLYEDQGTTKARVVLDTEETSFTGRGVARCSPDDHEVPEIGDELAAGRAMHDLGE 66
Query 73 RMLKVSTHDIEA--VTHQP 89
++L + DIE TH+P
Sbjct 67 QLLIAAERDIEGEIATHRP 85
>gi|302539906|ref|ZP_07292248.1| conserved hypothetical protein [Streptomyces hygroscopicus ATCC
53653]
gi|302457524|gb|EFL20617.1| conserved hypothetical protein [Streptomyces himastatinicus ATCC
53653]
Length=96
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/73 (47%), Positives = 48/73 (66%), Gaps = 1/73 (1%)
Query 13 WTVDISI-DEHEGLTRAKARLRWREKELVGVGLARLNPADRNVPEIGDELSVARALSDLG 71
W V + + ++ EG T+A+ L L G G AR NP DR++P IGDEL+ RALSDLG
Sbjct 7 WKVHLYVFEDDEGRTKARVELDTGAAALTGRGTARRNPEDRDIPVIGDELAAGRALSDLG 66
Query 72 KRMLKVSTHDIEA 84
++L+ + HDIE+
Sbjct 67 HQLLRAAEHDIES 79
>gi|269127102|ref|YP_003300472.1| hypothetical protein Tcur_2889 [Thermomonospora curvata DSM 43183]
gi|268312060|gb|ACY98434.1| Domain of unknown function DUF1876 [Thermomonospora curvata DSM
43183]
Length=88
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/87 (40%), Positives = 51/87 (59%), Gaps = 0/87 (0%)
Query 8 HVLQHWTVDISIDEHEGLTRAKARLRWREKELVGVGLARLNPADRNVPEIGDELSVARAL 67
H + W + + I E + T A+A+L L G G+AR NP D +VP IGDEL+V+RAL
Sbjct 2 HQDKDWQLTVHISEQDRYTEAEAKLSTPNGTLTGRGVARRNPRDADVPSIGDELAVSRAL 61
Query 68 SDLGKRMLKVSTHDIEAVTHQPARLLY 94
S+L +L + +I + H+ RL +
Sbjct 62 SELSHGLLDAAAREISQIEHRKVRLTH 88
>gi|302557031|ref|ZP_07309373.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000]
gi|302474649|gb|EFL37742.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000]
Length=94
Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query 8 HVLQHWTVDISIDEHEGLTRAKARLRWREKELVGVGLARLNPADRNVPEIGDELSVARAL 67
H L+ W + + E +G T+A+A + L G G AR NPAD +VPEIGDEL+ RAL
Sbjct 3 HTLE-WKTRLYLFEEDGTTKARAMVDTGTTVLTGHGAARRNPADPDVPEIGDELAAGRAL 61
Query 68 SDLGKRMLKVSTHDI 82
DLG+++L ++ D+
Sbjct 62 QDLGRQLLDIAERDV 76
>gi|311895311|dbj|BAJ27719.1| hypothetical protein KSE_18950 [Kitasatospora setae KM-6054]
Length=87
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/85 (38%), Positives = 47/85 (56%), Gaps = 1/85 (1%)
Query 11 QHWTVDISIDEHEGLTRAKARLR-WREKELVGVGLARLNPADRNVPEIGDELSVARALSD 69
HW VD++ DE E T A L + G G AR NPAD +G+EL+ ARA D
Sbjct 3 NHWIVDLTFDEDESRTTCTAALSGFSAPGARGTGTARRNPADEADSTVGEELAAARACDD 62
Query 70 LGKRMLKVSTHDIEAVTHQPARLLY 94
L ++++ + +E+ TH PA+L +
Sbjct 63 LARQLIGHAARGVESHTHTPAQLSF 87
>gi|226359502|ref|YP_002777279.1| hypothetical protein ROP_00870 [Rhodococcus opacus B4]
gi|226237986|dbj|BAH48334.1| hypothetical protein [Rhodococcus opacus B4]
Length=103
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (64%), Gaps = 7/80 (8%)
Query 13 WTVDISIDEHEGL-----TRAKARLRWREKE-LVGVGLARLNPADRNVPEIGDELSVARA 66
W+V+I IDEH+ TRA+ARLR + VG GLAR NP +VPE+ D+++ ARA
Sbjct 6 WSVNIVIDEHKSAETGAQTRARARLRTSGRAAFVGTGLARRNPHHTDVPEVSDDMAAARA 65
Query 67 LSDLGKRMLKVSTHDIEAVT 86
L+DL ++ + + EAVT
Sbjct 66 LADLSHQLYEAAAQR-EAVT 84
>gi|254381632|ref|ZP_04996996.1| hypothetical protein SSAG_01298 [Streptomyces sp. Mg1]
gi|194340541|gb|EDX21507.1| hypothetical protein SSAG_01298 [Streptomyces sp. Mg1]
Length=99
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/81 (40%), Positives = 45/81 (56%), Gaps = 0/81 (0%)
Query 13 WTVDISIDEHEGLTRAKARLRWREKELVGVGLARLNPADRNVPEIGDELSVARALSDLGK 72
W V + + + T+A+ L L G G AR P D +VPEIGDEL+VARA+ DL
Sbjct 7 WKVRLYLFGDDHTTKARLELDTGTNRLTGHGTARCAPRDNDVPEIGDELAVARAMEDLAL 66
Query 73 RMLKVSTHDIEAVTHQPARLL 93
+M + + D++A P R L
Sbjct 67 QMKRAAYGDMQAAGAPPCRSL 87
>gi|294628509|ref|ZP_06707069.1| conserved hypothetical protein [Streptomyces sp. e14]
gi|292831842|gb|EFF90191.1| conserved hypothetical protein [Streptomyces sp. e14]
Length=103
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/83 (39%), Positives = 46/83 (56%), Gaps = 0/83 (0%)
Query 3 GDQSDHVLQHWTVDISIDEHEGLTRAKARLRWREKELVGVGLARLNPADRNVPEIGDELS 62
D ++ W +++ + EH+ T A+ L + L AR NP D VPEIGDEL+
Sbjct 5 ADSRPPSVREWRLNLYLSEHDPDTTARIVLDTGDNVLESCAEARRNPYDPAVPEIGDELA 64
Query 63 VARALSDLGKRMLKVSTHDIEAV 85
RAL LG+ +L+ + DIEAV
Sbjct 65 AGRALIALGRDLLRAAAGDIEAV 87
>gi|337764661|emb|CCB73370.1| conserved protein of unknown function [Streptomyces cattleya
NRRL 8057]
Length=89
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/71 (39%), Positives = 40/71 (57%), Gaps = 0/71 (0%)
Query 13 WTVDISIDEHEGLTRAKARLRWREKELVGVGLARLNPADRNVPEIGDELSVARALSDLGK 72
W D+ + E + +T AK L L G G+A NP D VP IGDEL+ RA +DL +
Sbjct 7 WNADVFLVEDDDVTEAKVTLHTLNTALTGHGVAHRNPLDPQVPRIGDELATGRAFADLAR 66
Query 73 RMLKVSTHDIE 83
+++ + DI+
Sbjct 67 QLIGTAQEDID 77
>gi|72162361|ref|YP_290018.1| hypothetical protein Tfu_1962 [Thermobifida fusca YX]
gi|71916093|gb|AAZ55995.1| hypothetical protein Tfu_1962 [Thermobifida fusca YX]
Length=169
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/87 (41%), Positives = 53/87 (61%), Gaps = 4/87 (4%)
Query 5 QSDHVLQHWTVDISIDE-HEG---LTRAKARLRWREKELVGVGLARLNPADRNVPEIGDE 60
Q L+ +D+++ E HE T A+A+L + L G G AR +P D ++PEIG+E
Sbjct 78 QPGQSLKRIQIDVAVSEVHENGSVRTLAEAQLPSTKWNLRGHGEARKHPTDADIPEIGEE 137
Query 61 LSVARALSDLGKRMLKVSTHDIEAVTH 87
L+VARALSDL ++ +V+ DIE +
Sbjct 138 LAVARALSDLAHKLRRVAAEDIEQASQ 164
>gi|332670397|ref|YP_004453405.1| hypothetical protein Celf_1888 [Cellulomonas fimi ATCC 484]
gi|332339435|gb|AEE46018.1| Domain of unknown function DUF1876 [Cellulomonas fimi ATCC 484]
Length=90
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/51 (51%), Positives = 36/51 (71%), Gaps = 0/51 (0%)
Query 39 LVGVGLARLNPADRNVPEIGDELSVARALSDLGKRMLKVSTHDIEAVTHQP 89
L+G G AR P+D +VPEIG EL+VARAL L ++L+ ++ DI A+ H P
Sbjct 35 LLGTGRARRRPSDTDVPEIGGELAVARALRSLADQLLEATSGDIAAIEHHP 85
>gi|297560903|ref|YP_003679877.1| hypothetical protein Ndas_1944 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296845351|gb|ADH67371.1| Domain of unknown function DUF1918 [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
Length=168
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/93 (41%), Positives = 55/93 (60%), Gaps = 13/93 (13%)
Query 8 HVLQHWTVDISI-DEHEGLTRAKARLRWREKELV--------GVGLARLNPADRNVPEIG 58
+ W VD+ + +E+EG + AR W E LV G G+AR +P D +VPEIG
Sbjct 78 QTTKRWNVDVVVAEENEGDS---ART-WAEVGLVADDGTALRGHGMARKHPTDLDVPEIG 133
Query 59 DELSVARALSDLGKRMLKVSTHDIEAVTHQPAR 91
+EL+V+RALSDL +++ +V+ DI T P R
Sbjct 134 EELAVSRALSDLSRQLRQVAAEDITDNTGTPWR 166
>gi|345011290|ref|YP_004813644.1| hypothetical protein Strvi_3699 [Streptomyces violaceusniger
Tu 4113]
gi|344037639|gb|AEM83364.1| Domain of unknown function DUF1876 [Streptomyces violaceusniger
Tu 4113]
Length=89
Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/80 (39%), Positives = 47/80 (59%), Gaps = 1/80 (1%)
Query 15 VDISIDEHEGLTRAKARLRWRE-KELVGVGLARLNPADRNVPEIGDELSVARALSDLGKR 73
+++ E LT A RLR + E++ G A NP D + P +G+E++ ARAL++L R
Sbjct 9 IEMEFREIGPLTEAVVRLRMHDGTEMLAQGRANRNPEDPSQPRVGEEIAAARALTNLAHR 68
Query 74 MLKVSTHDIEAVTHQPARLL 93
++ + DIE VTH A LL
Sbjct 69 LIGKAGGDIEEVTHSKAHLL 88
Lambda K H
0.319 0.135 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 127354591080
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40