BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1742
Length=245
Score E
Sequences producing significant alignments: (Bits) Value
gi|308380165|ref|ZP_07669134.1| hypothetical protein TMKG_02250 ... 503 9e-141
gi|15608880|ref|NP_216258.1| hypothetical protein Rv1742 [Mycoba... 497 7e-139
gi|340626750|ref|YP_004745202.1| hypothetical protein MCAN_17561... 484 5e-135
gi|31792930|ref|NP_855423.1| hypothetical protein Mb1771 [Mycoba... 448 4e-124
gi|289574413|ref|ZP_06454640.1| conserved hypothetical protein [... 447 6e-124
gi|289447358|ref|ZP_06437102.1| conserved hypothetical protein [... 443 8e-123
gi|183982590|ref|YP_001850881.1| hypothetical protein MMAR_2580 ... 397 1e-108
gi|118618540|ref|YP_906872.1| hypothetical protein MUL_3181 [Myc... 397 1e-108
gi|240169467|ref|ZP_04748126.1| hypothetical protein MkanA1_0914... 373 2e-101
gi|226308822|ref|YP_002768782.1| hypothetical protein RER_53350 ... 263 2e-68
gi|229488950|ref|ZP_04382816.1| conserved hypothetical protein [... 254 8e-66
gi|217976573|ref|YP_002360720.1| hypothetical protein Msil_0383 ... 184 8e-45
gi|334342955|ref|YP_004555559.1| hypothetical protein Sphch_3462... 173 2e-41
gi|120403373|ref|YP_953202.1| hypothetical protein Mvan_2382 [My... 170 2e-40
gi|158423009|ref|YP_001524301.1| hypothetical protein AZC_1385 [... 170 2e-40
gi|294146947|ref|YP_003559613.1| hypothetical protein SJA_C2-051... 169 2e-40
gi|161521715|ref|YP_001585142.1| hypothetical protein Bmul_5180 ... 169 4e-40
gi|256425693|ref|YP_003126346.1| hypothetical protein Cpin_6744 ... 160 2e-37
gi|254252664|ref|ZP_04945982.1| hypothetical protein BDAG_01903 ... 159 3e-37
gi|298241165|ref|ZP_06964972.1| conserved hypothetical protein [... 158 5e-37
gi|197294926|ref|YP_002153467.1| hypothetical protein BCAS0074 [... 158 8e-37
gi|338975437|ref|ZP_08630789.1| hypothetical protein CSIRO_3899 ... 155 6e-36
gi|298251606|ref|ZP_06975409.1| conserved hypothetical protein [... 154 1e-35
gi|197294928|ref|YP_002153469.1| hypothetical protein BCAS0076 [... 154 1e-35
gi|118471056|ref|YP_891034.1| hypothetical protein MSMEG_6830 [M... 154 1e-35
gi|254252662|ref|ZP_04945980.1| hypothetical protein BDAG_01901 ... 152 3e-35
gi|161521713|ref|YP_001585140.1| hypothetical protein Bmul_5178 ... 152 6e-35
gi|330821768|ref|YP_004350630.1| hypothetical protein bgla_2g270... 148 6e-34
gi|256421252|ref|YP_003121905.1| hypothetical protein Cpin_2212 ... 146 3e-33
gi|294010135|ref|YP_003543595.1| hypothetical protein SJA_C1-014... 144 1e-32
gi|107025526|ref|YP_623037.1| hypothetical protein Bcen_3168 [Bu... 139 3e-31
gi|330821766|ref|YP_004350628.1| hypothetical protein bgla_2g269... 138 8e-31
gi|300785511|ref|YP_003765802.1| hypothetical protein AMED_3617 ... 137 2e-30
gi|297156017|gb|ADI05729.1| hypothetical protein SBI_02608 [Stre... 128 9e-28
gi|27381379|ref|NP_772908.1| hypothetical protein blr6268 [Brady... 120 1e-25
gi|189345793|ref|YP_001942322.1| hypothetical protein Clim_0248 ... 113 3e-23
gi|110597646|ref|ZP_01385931.1| conserved hypothetical protein [... 107 1e-21
gi|194337611|ref|YP_002019405.1| hypothetical protein Ppha_2628 ... 104 9e-21
gi|116330489|ref|YP_800207.1| hypothetical protein LBJ_0784 [Lep... 92.0 7e-17
gi|333814327|gb|AEG06995.1| hypothetical protein SinmeB_5780 [Si... 91.7 8e-17
gi|116328904|ref|YP_798624.1| hypothetical protein LBL_2295 [Lep... 91.7 8e-17
gi|92116326|ref|YP_576055.1| hypothetical protein Nham_0710 [Nit... 90.9 2e-16
gi|45657069|ref|YP_001155.1| hypothetical protein LIC11185 [Lept... 89.7 4e-16
gi|227818802|ref|YP_002822773.1| hypothetical protein NGR_b05610... 88.6 7e-16
gi|15616370|ref|NP_244675.1| arginyl-tRNA synthetase [Bacillus h... 40.8 0.18
gi|242077724|ref|XP_002448798.1| hypothetical protein SORBIDRAFT... 40.8 0.19
gi|319954253|ref|YP_004165520.1| hypothetical protein Celal_2740... 39.3 0.52
gi|300775562|ref|ZP_07085423.1| prolyl oligopeptidase [Chryseoba... 38.9 0.60
gi|312112663|ref|YP_003990979.1| arginyl-tRNA synthetase [Geobac... 38.9 0.67
gi|321313283|ref|YP_004205570.1| arginyl-tRNA synthetase [Bacill... 38.5 0.98
>gi|308380165|ref|ZP_07669134.1| hypothetical protein TMKG_02250 [Mycobacterium tuberculosis SUMu011]
gi|308362396|gb|EFP51247.1| hypothetical protein TMKG_02250 [Mycobacterium tuberculosis SUMu011]
Length=330
Score = 503 bits (1295), Expect = 9e-141, Method: Compositional matrix adjust.
Identities = 245/245 (100%), Positives = 245/245 (100%), Gaps = 0/245 (0%)
Query 1 MSALLDGVLDAHGGLQRWRAAETVHGRVRTGGLLLRTRVPGNRFADYRITVHVQQARTVL 60
MSALLDGVLDAHGGLQRWRAAETVHGRVRTGGLLLRTRVPGNRFADYRITVHVQQARTVL
Sbjct 86 MSALLDGVLDAHGGLQRWRAAETVHGRVRTGGLLLRTRVPGNRFADYRITVHVQQARTVL 145
Query 61 DPFPRDGYRGVFESGQVRIESHDGAVISSRAHPRAAFFGRSGLRRNIRWDPLDSVYFAGY 120
DPFPRDGYRGVFESGQVRIESHDGAVISSRAHPRAAFFGRSGLRRNIRWDPLDSVYFAGY
Sbjct 146 DPFPRDGYRGVFESGQVRIESHDGAVISSRAHPRAAFFGRSGLRRNIRWDPLDSVYFAGY 205
Query 121 AMWNYLTTPYLLTREGVAVEEGAPWQQEGETWRRLIVSFPPDIDTHSPRQTFYVDASGLL 180
AMWNYLTTPYLLTREGVAVEEGAPWQQEGETWRRLIVSFPPDIDTHSPRQTFYVDASGLL
Sbjct 206 AMWNYLTTPYLLTREGVAVEEGAPWQQEGETWRRLIVSFPPDIDTHSPRQTFYVDASGLL 265
Query 181 RRHDYVPEVVGHWARAAHYCADPVDVDGFVFPTCRWVHPIGPGNRSLPFPTLVSILLTDI 240
RRHDYVPEVVGHWARAAHYCADPVDVDGFVFPTCRWVHPIGPGNRSLPFPTLVSILLTDI
Sbjct 266 RRHDYVPEVVGHWARAAHYCADPVDVDGFVFPTCRWVHPIGPGNRSLPFPTLVSILLTDI 325
Query 241 RVETD 245
RVETD
Sbjct 326 RVETD 330
>gi|15608880|ref|NP_216258.1| hypothetical protein Rv1742 [Mycobacterium tuberculosis H37Rv]
gi|15841206|ref|NP_336243.1| hypothetical protein MT1784 [Mycobacterium tuberculosis CDC1551]
gi|148661541|ref|YP_001283064.1| hypothetical protein MRA_1753 [Mycobacterium tuberculosis H37Ra]
63 more sequence titles
Length=245
Score = 497 bits (1279), Expect = 7e-139, Method: Compositional matrix adjust.
Identities = 245/245 (100%), Positives = 245/245 (100%), Gaps = 0/245 (0%)
Query 1 MSALLDGVLDAHGGLQRWRAAETVHGRVRTGGLLLRTRVPGNRFADYRITVHVQQARTVL 60
MSALLDGVLDAHGGLQRWRAAETVHGRVRTGGLLLRTRVPGNRFADYRITVHVQQARTVL
Sbjct 1 MSALLDGVLDAHGGLQRWRAAETVHGRVRTGGLLLRTRVPGNRFADYRITVHVQQARTVL 60
Query 61 DPFPRDGYRGVFESGQVRIESHDGAVISSRAHPRAAFFGRSGLRRNIRWDPLDSVYFAGY 120
DPFPRDGYRGVFESGQVRIESHDGAVISSRAHPRAAFFGRSGLRRNIRWDPLDSVYFAGY
Sbjct 61 DPFPRDGYRGVFESGQVRIESHDGAVISSRAHPRAAFFGRSGLRRNIRWDPLDSVYFAGY 120
Query 121 AMWNYLTTPYLLTREGVAVEEGAPWQQEGETWRRLIVSFPPDIDTHSPRQTFYVDASGLL 180
AMWNYLTTPYLLTREGVAVEEGAPWQQEGETWRRLIVSFPPDIDTHSPRQTFYVDASGLL
Sbjct 121 AMWNYLTTPYLLTREGVAVEEGAPWQQEGETWRRLIVSFPPDIDTHSPRQTFYVDASGLL 180
Query 181 RRHDYVPEVVGHWARAAHYCADPVDVDGFVFPTCRWVHPIGPGNRSLPFPTLVSILLTDI 240
RRHDYVPEVVGHWARAAHYCADPVDVDGFVFPTCRWVHPIGPGNRSLPFPTLVSILLTDI
Sbjct 181 RRHDYVPEVVGHWARAAHYCADPVDVDGFVFPTCRWVHPIGPGNRSLPFPTLVSILLTDI 240
Query 241 RVETD 245
RVETD
Sbjct 241 RVETD 245
>gi|340626750|ref|YP_004745202.1| hypothetical protein MCAN_17561 [Mycobacterium canettii CIPT
140010059]
gi|340004940|emb|CCC44088.1| hypothetical protein MCAN_17561 [Mycobacterium canettii CIPT
140010059]
Length=245
Score = 484 bits (1246), Expect = 5e-135, Method: Compositional matrix adjust.
Identities = 239/245 (98%), Positives = 240/245 (98%), Gaps = 0/245 (0%)
Query 1 MSALLDGVLDAHGGLQRWRAAETVHGRVRTGGLLLRTRVPGNRFADYRITVHVQQARTVL 60
MS LLD VLDAHGGLQRWRAAETVHGRVRTGGLLLRTRVPGNRFADYRITVHVQQARTVL
Sbjct 1 MSTLLDEVLDAHGGLQRWRAAETVHGRVRTGGLLLRTRVPGNRFADYRITVHVQQARTVL 60
Query 61 DPFPRDGYRGVFESGQVRIESHDGAVISSRAHPRAAFFGRSGLRRNIRWDPLDSVYFAGY 120
DPFPRDGYRGVFESGQVRIESHDGAVISSRAHPRAAFFG SGLRRNIRWDPLDSVYFAGY
Sbjct 61 DPFPRDGYRGVFESGQVRIESHDGAVISSRAHPRAAFFGGSGLRRNIRWDPLDSVYFAGY 120
Query 121 AMWNYLTTPYLLTREGVAVEEGAPWQQEGETWRRLIVSFPPDIDTHSPRQTFYVDASGLL 180
AMWNYLTTPYLLTREGVAVEEGAPWQQEGETWRRLIVSFPPDI THSPRQTFYVDASGLL
Sbjct 121 AMWNYLTTPYLLTREGVAVEEGAPWQQEGETWRRLIVSFPPDIHTHSPRQTFYVDASGLL 180
Query 181 RRHDYVPEVVGHWARAAHYCADPVDVDGFVFPTCRWVHPIGPGNRSLPFPTLVSILLTDI 240
RRHDYVPEVVGHWARAAHYCADPVDVDGFVFPTCRWV PIGPGNRSLPFPTLVSILLTD+
Sbjct 181 RRHDYVPEVVGHWARAAHYCADPVDVDGFVFPTCRWVQPIGPGNRSLPFPTLVSILLTDM 240
Query 241 RVETD 245
RVETD
Sbjct 241 RVETD 245
>gi|31792930|ref|NP_855423.1| hypothetical protein Mb1771 [Mycobacterium bovis AF2122/97]
gi|121637650|ref|YP_977873.1| hypothetical protein BCG_1781 [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224990125|ref|YP_002644812.1| hypothetical protein JTY_1756 [Mycobacterium bovis BCG str. Tokyo
172]
gi|31618521|emb|CAD94473.1| HYPOTHETICAL PROTEIN [SECOND PART] [Mycobacterium bovis AF2122/97]
gi|121493297|emb|CAL71768.1| Hypothetical protein BCG_1781 [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224773238|dbj|BAH26044.1| hypothetical protein JTY_1756 [Mycobacterium bovis BCG str. Tokyo
172]
gi|341601668|emb|CCC64341.1| hypothetical protein BCGM_1748 [Mycobacterium bovis BCG str.
Moreau RDJ]
Length=221
Score = 448 bits (1152), Expect = 4e-124, Method: Compositional matrix adjust.
Identities = 220/220 (100%), Positives = 220/220 (100%), Gaps = 0/220 (0%)
Query 26 GRVRTGGLLLRTRVPGNRFADYRITVHVQQARTVLDPFPRDGYRGVFESGQVRIESHDGA 85
GRVRTGGLLLRTRVPGNRFADYRITVHVQQARTVLDPFPRDGYRGVFESGQVRIESHDGA
Sbjct 2 GRVRTGGLLLRTRVPGNRFADYRITVHVQQARTVLDPFPRDGYRGVFESGQVRIESHDGA 61
Query 86 VISSRAHPRAAFFGRSGLRRNIRWDPLDSVYFAGYAMWNYLTTPYLLTREGVAVEEGAPW 145
VISSRAHPRAAFFGRSGLRRNIRWDPLDSVYFAGYAMWNYLTTPYLLTREGVAVEEGAPW
Sbjct 62 VISSRAHPRAAFFGRSGLRRNIRWDPLDSVYFAGYAMWNYLTTPYLLTREGVAVEEGAPW 121
Query 146 QQEGETWRRLIVSFPPDIDTHSPRQTFYVDASGLLRRHDYVPEVVGHWARAAHYCADPVD 205
QQEGETWRRLIVSFPPDIDTHSPRQTFYVDASGLLRRHDYVPEVVGHWARAAHYCADPVD
Sbjct 122 QQEGETWRRLIVSFPPDIDTHSPRQTFYVDASGLLRRHDYVPEVVGHWARAAHYCADPVD 181
Query 206 VDGFVFPTCRWVHPIGPGNRSLPFPTLVSILLTDIRVETD 245
VDGFVFPTCRWVHPIGPGNRSLPFPTLVSILLTDIRVETD
Sbjct 182 VDGFVFPTCRWVHPIGPGNRSLPFPTLVSILLTDIRVETD 221
>gi|289574413|ref|ZP_06454640.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
gi|289538844|gb|EFD43422.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
Length=240
Score = 447 bits (1150), Expect = 6e-124, Method: Compositional matrix adjust.
Identities = 220/220 (100%), Positives = 220/220 (100%), Gaps = 0/220 (0%)
Query 26 GRVRTGGLLLRTRVPGNRFADYRITVHVQQARTVLDPFPRDGYRGVFESGQVRIESHDGA 85
GRVRTGGLLLRTRVPGNRFADYRITVHVQQARTVLDPFPRDGYRGVFESGQVRIESHDGA
Sbjct 21 GRVRTGGLLLRTRVPGNRFADYRITVHVQQARTVLDPFPRDGYRGVFESGQVRIESHDGA 80
Query 86 VISSRAHPRAAFFGRSGLRRNIRWDPLDSVYFAGYAMWNYLTTPYLLTREGVAVEEGAPW 145
VISSRAHPRAAFFGRSGLRRNIRWDPLDSVYFAGYAMWNYLTTPYLLTREGVAVEEGAPW
Sbjct 81 VISSRAHPRAAFFGRSGLRRNIRWDPLDSVYFAGYAMWNYLTTPYLLTREGVAVEEGAPW 140
Query 146 QQEGETWRRLIVSFPPDIDTHSPRQTFYVDASGLLRRHDYVPEVVGHWARAAHYCADPVD 205
QQEGETWRRLIVSFPPDIDTHSPRQTFYVDASGLLRRHDYVPEVVGHWARAAHYCADPVD
Sbjct 141 QQEGETWRRLIVSFPPDIDTHSPRQTFYVDASGLLRRHDYVPEVVGHWARAAHYCADPVD 200
Query 206 VDGFVFPTCRWVHPIGPGNRSLPFPTLVSILLTDIRVETD 245
VDGFVFPTCRWVHPIGPGNRSLPFPTLVSILLTDIRVETD
Sbjct 201 VDGFVFPTCRWVHPIGPGNRSLPFPTLVSILLTDIRVETD 240
>gi|289447358|ref|ZP_06437102.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
gi|289420316|gb|EFD17517.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
Length=240
Score = 443 bits (1140), Expect = 8e-123, Method: Compositional matrix adjust.
Identities = 219/220 (99%), Positives = 219/220 (99%), Gaps = 0/220 (0%)
Query 26 GRVRTGGLLLRTRVPGNRFADYRITVHVQQARTVLDPFPRDGYRGVFESGQVRIESHDGA 85
GRVRTGGLLLRT VPGNRFADYRITVHVQQARTVLDPFPRDGYRGVFESGQVRIESHDGA
Sbjct 21 GRVRTGGLLLRTWVPGNRFADYRITVHVQQARTVLDPFPRDGYRGVFESGQVRIESHDGA 80
Query 86 VISSRAHPRAAFFGRSGLRRNIRWDPLDSVYFAGYAMWNYLTTPYLLTREGVAVEEGAPW 145
VISSRAHPRAAFFGRSGLRRNIRWDPLDSVYFAGYAMWNYLTTPYLLTREGVAVEEGAPW
Sbjct 81 VISSRAHPRAAFFGRSGLRRNIRWDPLDSVYFAGYAMWNYLTTPYLLTREGVAVEEGAPW 140
Query 146 QQEGETWRRLIVSFPPDIDTHSPRQTFYVDASGLLRRHDYVPEVVGHWARAAHYCADPVD 205
QQEGETWRRLIVSFPPDIDTHSPRQTFYVDASGLLRRHDYVPEVVGHWARAAHYCADPVD
Sbjct 141 QQEGETWRRLIVSFPPDIDTHSPRQTFYVDASGLLRRHDYVPEVVGHWARAAHYCADPVD 200
Query 206 VDGFVFPTCRWVHPIGPGNRSLPFPTLVSILLTDIRVETD 245
VDGFVFPTCRWVHPIGPGNRSLPFPTLVSILLTDIRVETD
Sbjct 201 VDGFVFPTCRWVHPIGPGNRSLPFPTLVSILLTDIRVETD 240
>gi|183982590|ref|YP_001850881.1| hypothetical protein MMAR_2580 [Mycobacterium marinum M]
gi|183175916|gb|ACC41026.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=245
Score = 397 bits (1019), Expect = 1e-108, Method: Compositional matrix adjust.
Identities = 194/245 (80%), Positives = 206/245 (85%), Gaps = 0/245 (0%)
Query 1 MSALLDGVLDAHGGLQRWRAAETVHGRVRTGGLLLRTRVPGNRFADYRITVHVQQARTVL 60
MSALLD VLDAHGGL RWR A T+H RVRTGGLLLRTRVPGNR ADYRITV V + R VL
Sbjct 1 MSALLDEVLDAHGGLTRWRNAATIHARVRTGGLLLRTRVPGNRLADYRITVTVARQRVVL 60
Query 61 DPFPRDGYRGVFESGQVRIESHDGAVISSRAHPRAAFFGRSGLRRNIRWDPLDSVYFAGY 120
DPFPR G RGVFE QVRIES DG V+SSR + RAAFFGRSGLRRNIRWDPLDSVYFAGY
Sbjct 61 DPFPRAGQRGVFERPQVRIESDDGQVLSSRTNARAAFFGRSGLRRNIRWDPLDSVYFAGY 120
Query 121 AMWNYLTTPYLLTREGVAVEEGAPWQQEGETWRRLIVSFPPDIDTHSPRQTFYVDASGLL 180
AMWNYLTTPYLLTREGV V E PWQQ G+TWRRL SFP IDTHSPRQTFY D GLL
Sbjct 121 AMWNYLTTPYLLTREGVEVSEAQPWQQGGQTWRRLRASFPATIDTHSPRQTFYFDGDGLL 180
Query 181 RRHDYVPEVVGHWARAAHYCADPVDVDGFVFPTCRWVHPIGPGNRSLPFPTLVSILLTDI 240
RRHDYVPEV+GHWARAAHYC +P++ DG VFPT RWVHPIGP NRSL FPTLVSI L D+
Sbjct 181 RRHDYVPEVIGHWARAAHYCVEPIEADGLVFPTRRWVHPIGPRNRSLSFPTLVSIQLADV 240
Query 241 RVETD 245
V+T+
Sbjct 241 HVDTE 245
>gi|118618540|ref|YP_906872.1| hypothetical protein MUL_3181 [Mycobacterium ulcerans Agy99]
gi|118570650|gb|ABL05401.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=245
Score = 397 bits (1019), Expect = 1e-108, Method: Compositional matrix adjust.
Identities = 194/245 (80%), Positives = 206/245 (85%), Gaps = 0/245 (0%)
Query 1 MSALLDGVLDAHGGLQRWRAAETVHGRVRTGGLLLRTRVPGNRFADYRITVHVQQARTVL 60
MSALLD VLDAHGGL RWR A T+H RVRTGGLLLRTRVPGNR ADYRITV V + R VL
Sbjct 1 MSALLDEVLDAHGGLTRWRNAATIHARVRTGGLLLRTRVPGNRLADYRITVTVARQRVVL 60
Query 61 DPFPRDGYRGVFESGQVRIESHDGAVISSRAHPRAAFFGRSGLRRNIRWDPLDSVYFAGY 120
DPFPR G RGVFE QVRIES DG V+SSR + RAAFFGRSGLRRNIRWDPLDSVYFAGY
Sbjct 61 DPFPRAGQRGVFERPQVRIESDDGQVLSSRTNARAAFFGRSGLRRNIRWDPLDSVYFAGY 120
Query 121 AMWNYLTTPYLLTREGVAVEEGAPWQQEGETWRRLIVSFPPDIDTHSPRQTFYVDASGLL 180
AMWNYLTTPYLLTREGV V E PWQQ G+TWRRL SF IDTHSPRQTFY D GLL
Sbjct 121 AMWNYLTTPYLLTREGVEVSEAQPWQQGGQTWRRLRASFSATIDTHSPRQTFYFDGDGLL 180
Query 181 RRHDYVPEVVGHWARAAHYCADPVDVDGFVFPTCRWVHPIGPGNRSLPFPTLVSILLTDI 240
RRHDYVPEV+GHWARAAHYC +P++ DG VFPT RWVHPIGP NRSLPFPTLVSI L D+
Sbjct 181 RRHDYVPEVIGHWARAAHYCVEPIEADGLVFPTRRWVHPIGPRNRSLPFPTLVSIQLADV 240
Query 241 RVETD 245
V+T+
Sbjct 241 HVDTE 245
>gi|240169467|ref|ZP_04748126.1| hypothetical protein MkanA1_09149 [Mycobacterium kansasii ATCC
12478]
Length=263
Score = 373 bits (957), Expect = 2e-101, Method: Compositional matrix adjust.
Identities = 181/243 (75%), Positives = 204/243 (84%), Gaps = 0/243 (0%)
Query 2 SALLDGVLDAHGGLQRWRAAETVHGRVRTGGLLLRTRVPGNRFADYRITVHVQQARTVLD 61
S LLD L+AHGGLQRW++A +H RVR+GGLL+RTRVPGNRF DYRITV VQ+ RTV+D
Sbjct 20 STLLDEALEAHGGLQRWQSAAEIHSRVRSGGLLVRTRVPGNRFEDYRITVDVQEPRTVID 79
Query 62 PFPRDGYRGVFESGQVRIESHDGAVISSRAHPRAAFFGRSGLRRNIRWDPLDSVYFAGYA 121
PFP DG RGVF++G VRIESHDG VISSRA+PR AFFGRSGLRRN RWDPLDSVYFAGYA
Sbjct 80 PFPVDGQRGVFDNGTVRIESHDGHVISSRANPRPAFFGRSGLRRNFRWDPLDSVYFAGYA 139
Query 122 MWNYLTTPYLLTREGVAVEEGAPWQQEGETWRRLIVSFPPDIDTHSPRQTFYVDASGLLR 181
MWNYLTTPYLLTR+GV V+E W++ GETWRRL +FP I THSPRQ+FY DA G LR
Sbjct 140 MWNYLTTPYLLTRDGVEVDEAGTWREGGETWRRLNATFPAHIHTHSPRQSFYFDAGGRLR 199
Query 182 RHDYVPEVVGHWARAAHYCADPVDVDGFVFPTCRWVHPIGPGNRSLPFPTLVSILLTDIR 241
RHDYV EVVGHWARAAHYC +PVD G VF T R V+PIGPGNR LP PTLVS+ L+D+R
Sbjct 200 RHDYVAEVVGHWARAAHYCTEPVDAGGLVFQTRRRVYPIGPGNRPLPAPTLVSMQLSDLR 259
Query 242 VET 244
V+T
Sbjct 260 VDT 262
>gi|226308822|ref|YP_002768782.1| hypothetical protein RER_53350 [Rhodococcus erythropolis PR4]
gi|226187939|dbj|BAH36043.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
Length=243
Score = 263 bits (672), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 129/243 (54%), Positives = 162/243 (67%), Gaps = 1/243 (0%)
Query 1 MSALLDGVLDAHGGLQRWRAAETVHGRVRTGGLLLRTRVPGNRFADYRITVHVQQARTVL 60
M+ LLD VL AHGG++ W++ + R R GGLL + R PGN+ A + + V V + RTVL
Sbjct 1 MNELLDEVLTAHGGVEHWQSVSAITARGRLGGLLPQ-RFPGNKLAKFTVEVEVAEQRTVL 59
Query 61 DPFPRDGYRGVFESGQVRIESHDGAVISSRAHPRAAFFGRSGLRRNIRWDPLDSVYFAGY 120
FPR G VF+ G VRIE+ DG + SR PR+AFFG SG+RRN+ WD LD+ YFAGY
Sbjct 60 QDFPRVGECAVFDKGVVRIETRDGEELGSRTDPRSAFFGLSGVRRNLHWDALDTAYFAGY 119
Query 121 AMWNYLTTPYLLTREGVAVEEGAPWQQEGETWRRLIVSFPPDIDTHSPRQTFYVDASGLL 180
A WNYLT P LL R+ + V E PWQ+ G+ WRRL +F P IDTH +QTFYVD GL+
Sbjct 120 AFWNYLTAPLLLARDDITVTEAEPWQESGQQWRRLQATFAPAIDTHCRQQTFYVDNGGLI 179
Query 181 RRHDYVPEVVGHWARAAHYCADPVDVDGFVFPTCRWVHPIGPGNRSLPFPTLVSILLTDI 240
RRHD+V E VG WA+AA YC + DG FPT R V P GPG R L PTL+++ DI
Sbjct 180 RRHDFVAEPVGSWAKAALYCDQHREFDGLTFPTRRRVLPRGPGGRVLSRPTLLALDFDDI 239
Query 241 RVE 243
++
Sbjct 240 EIK 242
>gi|229488950|ref|ZP_04382816.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
gi|229324454|gb|EEN90209.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
Length=243
Score = 254 bits (649), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 125/243 (52%), Positives = 158/243 (66%), Gaps = 1/243 (0%)
Query 1 MSALLDGVLDAHGGLQRWRAAETVHGRVRTGGLLLRTRVPGNRFADYRITVHVQQARTVL 60
M+ LLD VL AHGG++RW++ + R R GGLL + R PGN+ A + + V V + RTVL
Sbjct 1 MTELLDEVLTAHGGVERWQSVSAITARGRLGGLLPQ-RFPGNKLAKFTVEVEVAEQRTVL 59
Query 61 DPFPRDGYRGVFESGQVRIESHDGAVISSRAHPRAAFFGRSGLRRNIRWDPLDSVYFAGY 120
FPR G VF+ G VRIE+ DG + SR R FFG G+RRN+ WD LD+ YFAGY
Sbjct 60 QDFPRVGECAVFDKGVVRIEARDGEELGSRTDLRPEFFGLKGVRRNLHWDALDTAYFAGY 119
Query 121 AMWNYLTTPYLLTREGVAVEEGAPWQQEGETWRRLIVSFPPDIDTHSPRQTFYVDASGLL 180
A WNYL P LL R+ + V E PWQ+ G+ WRRL +F P+IDTH +QTFYVD GL+
Sbjct 120 AFWNYLNAPLLLARDDITVTEAEPWQESGQQWRRLQATFAPEIDTHCRQQTFYVDNGGLI 179
Query 181 RRHDYVPEVVGHWARAAHYCADPVDVDGFVFPTCRWVHPIGPGNRSLPFPTLVSILLTDI 240
RRHD+V E VG WA+AA YC + DG FPT R V P GPG R PTL+++ DI
Sbjct 180 RRHDFVAEPVGSWAKAALYCDQHREFDGLTFPTRRRVLPRGPGGRVPSRPTLLALDFDDI 239
Query 241 RVE 243
++
Sbjct 240 EIK 242
>gi|217976573|ref|YP_002360720.1| hypothetical protein Msil_0383 [Methylocella silvestris BL2]
gi|217501949|gb|ACK49358.1| conserved hypothetical protein [Methylocella silvestris BL2]
Length=238
Score = 184 bits (468), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 103/241 (43%), Positives = 142/241 (59%), Gaps = 5/241 (2%)
Query 1 MSALLDGVLDAHGGLQRWRAAETVHGRVRTGGLLLRTRVPGNRFADYRITVHVQQARTVL 60
MS LL+ + AHGG +RW+ +T++ V GG + + + FAD R+T +
Sbjct 1 MSDLLELAIAAHGGWERWQHLKTLYAHVTIGGGIWPLKGWPDVFADARVTADPHRQHIEY 60
Query 61 DPFPRDGYRGVFESGQVRIESHDGAVISSRAHPRAAFFGRSGLRRNIRWDPLDSVYFAGY 120
PF G +FE+G+ I + G +I R PRAAF G S RWD +Y +GY
Sbjct 61 TPFVEAGRHSLFEAGRTAIVTDGGELIEQREAPRAAFEGHS---VTTRWDAHHLIY-SGY 116
Query 121 AMWNYLTTPYLLTREGVAVEEGAPWQQEGETWRRLIVSFPPDIDTHSPRQTFYVDASGLL 180
AMW YLTTP+L G EE PW ++GETWRRL V+FP DI++HS QTFY +A+G+L
Sbjct 117 AMWTYLTTPFLFKLPGFQTEEVEPWSEDGETWRRLKVTFPTDIESHSTDQTFYFNAAGIL 176
Query 181 RRHDYVPEVVGHWARAAHYCADPVDVDGFVFPTCRWVHPIGPGNRSLPFPTLVSILLTDI 240
+RHDY EV+G A +A+Y +P + GF+FPT R V+ IGP NR + V+I +I
Sbjct 177 QRHDYSVEVMGGTA-SANYATEPKEFGGFIFPTKRPVYSIGPDNRPVRDRVFVAIDFHNI 235
Query 241 R 241
Sbjct 236 E 236
>gi|334342955|ref|YP_004555559.1| hypothetical protein Sphch_3462 [Sphingobium chlorophenolicum
L-1]
gi|334103630|gb|AEG51053.1| hypothetical protein Sphch_3462 [Sphingobium chlorophenolicum
L-1]
Length=239
Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 92/242 (39%), Positives = 129/242 (54%), Gaps = 4/242 (1%)
Query 1 MSALLDGVLDAHGGLQRWRAAETVHGRVRTGGLLLRTRVPGNRFADYRITVHVQQARTVL 60
MS LLD + AHGG +RW + + + GG + + + D ++ ++ T
Sbjct 1 MSDLLDLAIAAHGGWERWEQIKGLKAHINAGGTVWHVKQWPGAYGDIHCSIDTREPHTEF 60
Query 61 DPFPRDGYRGVFESGQVRIESHDGAVISSRAHPRAAFFGRSGLRRNIRWDPLDSVYFAGY 120
PF + G V+E G + + DG +I R +PR AF G + WD +YF GY
Sbjct 61 SPFLKAGQHCVWEPGSTSVVADDGQIIERRENPRVAFEGHT---IPTPWDQQHLIYFTGY 117
Query 121 AMWNYLTTPYLLTREGVAVEEGAPWQQEGETWRRLIVSFPPDIDTHSPRQTFYVDASGLL 180
AMW YLTTP+L G EE W + GETWRRL V+FP ++ +HS QTFY D SGLL
Sbjct 118 AMWTYLTTPFLFKMPGFKSEEVESWDENGETWRRLKVTFPENVPSHSTVQTFYFDESGLL 177
Query 181 RRHDYVPEVVGHWARAAHYCADPVDVDGFVFPTCRWVHPIGPGNRSLPFPTLVSILLTDI 240
RRHDY +++G +A+Y +D DG VFPT R V+ NR + + I + DI
Sbjct 178 RRHDYSVDIMGG-TTSANYASDHKTFDGLVFPTKRKVYSADADNRPILDRVAIDIDILDI 236
Query 241 RV 242
+
Sbjct 237 KA 238
>gi|120403373|ref|YP_953202.1| hypothetical protein Mvan_2382 [Mycobacterium vanbaalenii PYR-1]
gi|119956191|gb|ABM13196.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=240
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/241 (42%), Positives = 129/241 (54%), Gaps = 6/241 (2%)
Query 4 LLDGVLDAHGGLQRWRAAETVHGRVRTGGLLLRTRVPGNRFADYRITVHVQQARTVLDPF 63
LLD VL A+GG RWR ET+ GG+L + D + + VQ+ R P
Sbjct 3 LLDEVLAAYGGTDRWRQIETIAIHQNVGGVLWSLKNVDGILDDSTVEIRVQEQRAWHRPL 62
Query 64 PRDGYRGVFESGQVRIESHDGA--VISSRAHPRAAFFGRSGLRRNIRWDPLDSVYFAGYA 121
P G R + +V I+S DGA + + + PRA+F G + W PL YFAGYA
Sbjct 63 PEPGMRSEYTPDRVGIQSDDGAHREVQTLSDPRASFAGHT---LTTPWSPLQLAYFAGYA 119
Query 122 MWNYLTTPYLLTREGVAVEEGAPWQQEGETWRRLIVSFPPDIDTHSPRQTFYVDASGLLR 181
MW YL+ PY LT GV EE W+++G+TWRRL V +P I THS Q YVD+ GLLR
Sbjct 120 MWTYLSEPYSLTFPGVYTEELGEWREDGQTWRRLGVRYPDTIATHSADQVLYVDSDGLLR 179
Query 182 RHDYVPEVVGHWARAAHYCADPVDVDGFVFPTCRWVHPIGPGNRSLPFPTLVSILLTDIR 241
R DY ++ G AAHY + DG V P R VH R +P P VSI + D+R
Sbjct 180 RRDYQVDIAGG-TPAAHYMDGHREYDGIVLPVTRVVHGRDDDGRKVPEPITVSIDIDDVR 238
Query 242 V 242
V
Sbjct 239 V 239
>gi|158423009|ref|YP_001524301.1| hypothetical protein AZC_1385 [Azorhizobium caulinodans ORS 571]
gi|158329898|dbj|BAF87383.1| hypothetical protein [Azorhizobium caulinodans ORS 571]
Length=239
Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 97/243 (40%), Positives = 127/243 (53%), Gaps = 4/243 (1%)
Query 1 MSALLDGVLDAHGGLQRWRAAETVHGRVRTGGLLLRTRVPGNRFADYRITVHVQQARTVL 60
M L ++ AHGGL RWR + +R GG+L + + +TV +
Sbjct 1 MDPLAQKIIAAHGGLDRWRTFTQLSAHLRQGGVLWPLKGHAGTLDETNVTVGLGTEWASH 60
Query 61 DPFPRDGYRGVFESGQVRIESHDGAVISSRAHPRAAFFGRSGLRRNIRWDPLDSVYFAGY 120
PF DG FE G+V I G ++ A PRA+F G + W YFAG
Sbjct 61 APFGPDGNVTRFEPGKVEIRDAAGTLLKQLAEPRASFAGHT---LETPWTEPQLAYFAGI 117
Query 121 AMWNYLTTPYLLTREGVAVEEGAPWQQEGETWRRLIVSFPPDIDTHSPRQTFYVDASGLL 180
AMW YL P+LL GV PW+++GE W++L V+FP DI THS QT YVD +GLL
Sbjct 118 AMWTYLNMPFLLAAPGVVSRSLGPWEEKGEVWQKLEVTFPRDIATHSTVQTLYVDDAGLL 177
Query 181 RRHDYVPEVVGHWARAAHYCADPVDVDGFVFPTCRWVHPIGPGNRSLPFPTLVSILLTDI 240
+RHDY E+ G+ AHY V+V G FPT R + P SLP P +VSI L+DI
Sbjct 178 KRHDYDVEIAGN-TPGAHYIGGYVEVQGLKFPTQRRIFPRQADGTSLPEPLVVSIDLSDI 236
Query 241 RVE 243
R+
Sbjct 237 RLN 239
>gi|294146947|ref|YP_003559613.1| hypothetical protein SJA_C2-05180 [Sphingobium japonicum UT26S]
gi|292677364|dbj|BAI98881.1| hypothetical protein SJA_C2-05180 [Sphingobium japonicum UT26S]
Length=239
Score = 169 bits (429), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 93/242 (39%), Positives = 127/242 (53%), Gaps = 4/242 (1%)
Query 1 MSALLDGVLDAHGGLQRWRAAETVHGRVRTGGLLLRTRVPGNRFADYRITVHVQQARTVL 60
MS LLD + AHGG RW + G + + +AD ++ ++ T
Sbjct 1 MSELLDLAIGAHGGWDRWEQINELKAHFHAEGTVWHVKQWPGAYADMHCSISTRKPHTEF 60
Query 61 DPFPRDGYRGVFESGQVRIESHDGAVISSRAHPRAAFFGRSGLRRNIRWDPLDSVYFAGY 120
PF ++G V+E I + G +I R +PR+ F G S WD VYF GY
Sbjct 61 TPFLKEGQHCVWEPDSTAIVADSGELIDKRENPRSFFEGHS---IPTPWDEQHLVYFTGY 117
Query 121 AMWNYLTTPYLLTREGVAVEEGAPWQQEGETWRRLIVSFPPDIDTHSPRQTFYVDASGLL 180
AMW YLTTP+L G EE PW + GETWRRL V+FP + +HS +QTFY D SGLL
Sbjct 118 AMWTYLTTPFLFRLPGFTSEEVEPWDENGETWRRLKVTFPEGVPSHSTQQTFYFDQSGLL 177
Query 181 RRHDYVPEVVGHWARAAHYCADPVDVDGFVFPTCRWVHPIGPGNRSLPFPTLVSILLTDI 240
RRHDY E++G +A+Y D DG +FPT R V+ G NR + ++I + D+
Sbjct 178 RRHDYSVEIMGG-TTSANYATDHKAFDGLIFPTKRRVYAAGADNRPILDRIAIAIDIWDV 236
Query 241 RV 242
+
Sbjct 237 QA 238
>gi|161521715|ref|YP_001585142.1| hypothetical protein Bmul_5180 [Burkholderia multivorans ATCC
17616]
gi|189352120|ref|YP_001947747.1| hypothetical protein BMULJ_03338 [Burkholderia multivorans ATCC
17616]
gi|160345765|gb|ABX18850.1| conserved hypothetical protein [Burkholderia multivorans ATCC
17616]
gi|189336142|dbj|BAG45211.1| conserved hypothetical protein [Burkholderia multivorans ATCC
17616]
Length=239
Score = 169 bits (427), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 95/243 (40%), Positives = 131/243 (54%), Gaps = 4/243 (1%)
Query 1 MSALLDGVLDAHGGLQRWRAAETVHGRVRTGGLLLRTRVPGNRFADYRITVHVQQARTVL 60
M L+D + A GG+ R+R+ +V ++ G + + + D R+TV + + R
Sbjct 1 MDDLVDRAIRAAGGMDRYRSFRSVSAQLHHTGAIWKLKQRDGVLTDSRVTVQLHEQRVSH 60
Query 61 DPFPRDGYRGVFESGQVRIESHDGAVISSRAHPRAAFFGRSGLRRNIRWDPLDSVYFAGY 120
PF V+ +V I DG+V+ + PRA+F G W YFAGY
Sbjct 61 APFAPTTDHSVYTPARVEIRRADGSVVEALDAPRASF---DGYEMETPWSNAQLAYFAGY 117
Query 121 AMWNYLTTPYLLTREGVAVEEGAPWQQEGETWRRLIVSFPPDIDTHSPRQTFYVDASGLL 180
MW YLT+P+LL +GV+ E PW+ +G WRRL V FPP+I THS QTFY DA GLL
Sbjct 118 TMWTYLTSPFLLRHDGVSSREIEPWRVDGLPWRRLRVEFPPEIATHSAVQTFYFDADGLL 177
Query 181 RRHDYVPEVVGHWARAAHYCADPVDVDGFVFPTCRWVHPIGPGNRSLPFPTLVSILLTDI 240
RRHDY ++ G A A Y D VDV G PT ++P NR+LP P +V + L++
Sbjct 178 RRHDYEVDIQGRNA-AVRYLGDYVDVQGIRMPTRFRIYPRTAENRALPAPLIVGVDLSNF 236
Query 241 RVE 243
R E
Sbjct 237 RFE 239
>gi|256425693|ref|YP_003126346.1| hypothetical protein Cpin_6744 [Chitinophaga pinensis DSM 2588]
gi|256040601|gb|ACU64145.1| conserved hypothetical protein [Chitinophaga pinensis DSM 2588]
Length=240
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/245 (36%), Positives = 124/245 (51%), Gaps = 7/245 (2%)
Query 1 MSALLDGVLDAHGGLQRWRAAETVHGRVRTGGLLLR-TRVPGNRFADYRITVHVQQARTV 59
M+ LL +DAHGGL W+ E + ++ GG+ +VPG D + +
Sbjct 1 MNDLLKFTIDAHGGLDNWKKFENLSAHLKVGGVTWAFKQVPG-IMDDINVLSSTTKQHVS 59
Query 60 LDPFPRDGYRGVFESGQVRIESHDGAVISSRAHPRAAFFGRSGLRRNIRWDPLDSVYFAG 119
PF +DG+ FE+ +V + ++ PR +F G W L YF G
Sbjct 60 FSPFLKDGWHNTFEADKVAVIDDRDVLVDQLYFPRNSF---KGYVTETPWSKLQVTYFTG 116
Query 120 YAMWNYLTTPYLLTREGVAVEEGAPWQQEGETWRRLIVSFPPDIDTHSPRQTFYVDASGL 179
YAMW YL P+ G V+E W ++G+ RRL V+FP +I TH Q FY+D GL
Sbjct 117 YAMWTYLNAPFCFAEPGYQVKEIETWTEKGQVLRRLHVTFPENIATHCREQVFYIDEEGL 176
Query 180 LRRHDYVPEVVGHWARAAHYCADPVDVDGFVFPTCRWVHPIGPGNRSL-PFPTLVSILLT 238
RRHDY E++ + A + HY AD +V G FPT R V+ N +L P +SI L+
Sbjct 177 FRRHDYNVEILNN-AASVHYVADYTEVQGIKFPTSRHVYKRNEDNTALVSGPLFISIELS 235
Query 239 DIRVE 243
DIR++
Sbjct 236 DIRLK 240
>gi|254252664|ref|ZP_04945982.1| hypothetical protein BDAG_01903 [Burkholderia dolosa AUO158]
gi|124895273|gb|EAY69153.1| hypothetical protein BDAG_01903 [Burkholderia dolosa AUO158]
Length=510
Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 93/243 (39%), Positives = 129/243 (54%), Gaps = 4/243 (1%)
Query 1 MSALLDGVLDAHGGLQRWRAAETVHGRVRTGGLLLRTRVPGNRFADYRITVHVQQARTVL 60
M L+D + A GG++R+R+ +V ++ G++ + + D R+TV + + R
Sbjct 272 MEDLVDFAIRAAGGMERFRSFRSVSAQLHHTGVIWKLKQRDGVLTDSRVTVQLHEQRVSH 331
Query 61 DPFPRDGYRGVFESGQVRIESHDGAVISSRAHPRAAFFGRSGLRRNIRWDPLDSVYFAGY 120
PF V+ +V I D +V+ + PRA+F G W YFAGY
Sbjct 332 APFAPTTDHSVYTPSRVEIRRADDSVVDTLDDPRASF---DGYDMETPWSNAQLAYFAGY 388
Query 121 AMWNYLTTPYLLTREGVAVEEGAPWQQEGETWRRLIVSFPPDIDTHSPRQTFYVDASGLL 180
MW YLT+P+LL GV E PW+ +G WRRL V F P+I THS QTFY DA GLL
Sbjct 389 TMWTYLTSPFLLRHSGVRSREIEPWKVDGLPWRRLRVEFAPEIATHSAVQTFYFDADGLL 448
Query 181 RRHDYVPEVVGHWARAAHYCADPVDVDGFVFPTCRWVHPIGPGNRSLPFPTLVSILLTDI 240
RRHDY ++ G A AA Y D VDV G PT ++P N +LP P +V + L++
Sbjct 449 RRHDYEVDIQGRNA-AARYLDDYVDVQGIRMPTRFRIYPRTADNVALPAPLIVGVDLSNF 507
Query 241 RVE 243
R E
Sbjct 508 RFE 510
>gi|298241165|ref|ZP_06964972.1| conserved hypothetical protein [Ktedonobacter racemifer DSM 44963]
gi|297554219|gb|EFH88083.1| conserved hypothetical protein [Ktedonobacter racemifer DSM 44963]
Length=252
Score = 158 bits (400), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 94/227 (42%), Positives = 122/227 (54%), Gaps = 4/227 (1%)
Query 1 MSALLDGVLDAHGGLQRWRAAETVHGRVRTGGLLLRTRVPGNRFADYRITVHVQQARTVL 60
M+ LL + AHGGL RW V V GG L + N TV + + T +
Sbjct 13 MNDLLARAIAAHGGLDRWNTFNKVTATVVAGGGLRPMKGLENDPNPRERTVTLHEETTFI 72
Query 61 DPFPRDGYRGVFESGQVRIESHDGAVISSRAHPRAAFFGRSGLRRNIRWDPLDSVYFAGY 120
PF + +R F +V IE+ GAV+S R++PRAAF +G WDPL + Y++GY
Sbjct 73 SPFGQPDWRMAFTPDRVAIETSTGAVVSERSNPRAAF---AGHVLETVWDPLHNAYWSGY 129
Query 121 AMWNYLTTPYLLTREGVAVEEGAPWQQEGETWRRLIVSFPPDIDTHSPRQTFYVDASGLL 180
+W YLTTP+L+ G V E APWQ++GE WR L FP I +HS Q FY LL
Sbjct 130 TIWTYLTTPFLMAMPGFQVAEIAPWQEDGELWRGLRARFPDAIASHSQEQDFYFGDDFLL 189
Query 181 RRHDYVPEVVGHWARAAHYCADPVDVDGFVFPTCRWVHPIGPGNRSL 227
RRHDY +V G A Y D V+ DGF FPT R + GPG + +
Sbjct 190 RRHDYHLDVAGS-VPVAQYVHDIVEADGFRFPTRRRAYVRGPGRKPI 235
>gi|197294926|ref|YP_002153467.1| hypothetical protein BCAS0074 [Burkholderia cenocepacia J2315]
gi|195944405|emb|CAR57007.1| conserved hypothetical protein [Burkholderia cenocepacia J2315]
Length=239
Score = 158 bits (399), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 92/243 (38%), Positives = 126/243 (52%), Gaps = 4/243 (1%)
Query 1 MSALLDGVLDAHGGLQRWRAAETVHGRVRTGGLLLRTRVPGNRFADYRITVHVQQARTVL 60
M L+D + A GG++R++ +V ++ G + + D R+TV + +
Sbjct 1 MEDLVDLAIRAAGGMERFKRFRSVSAQLHHTGAIWALKQRDGVLTDSRVTVQLHEQHVSH 60
Query 61 DPFPRDGYRGVFESGQVRIESHDGAVISSRAHPRAAFFGRSGLRRNIRWDPLDSVYFAGY 120
PF V+ +V I DG V+ + PRA+F G W YFAGY
Sbjct 61 APFAPTTDHSVYTPARVEIRRDDGTVVDTLDAPRASF---DGYEMETPWSNAQLAYFAGY 117
Query 121 AMWNYLTTPYLLTREGVAVEEGAPWQQEGETWRRLIVSFPPDIDTHSPRQTFYVDASGLL 180
MW YLT+P+LL GV E PW +G WRRL V F P+I THS QTFY DA GLL
Sbjct 118 TMWTYLTSPFLLRHGGVRSREIKPWIVDGLPWRRLHVEFAPEIATHSAVQTFYFDADGLL 177
Query 181 RRHDYVPEVVGHWARAAHYCADPVDVDGFVFPTCRWVHPIGPGNRSLPFPTLVSILLTDI 240
RRHDY ++ G A AA Y +D VDV G + PT ++P N +LP P +V + L++
Sbjct 178 RRHDYEVDIQGRNA-AARYISDYVDVQGILMPTRFRIYPRTDANVALPAPLIVGVDLSNF 236
Query 241 RVE 243
R E
Sbjct 237 RFE 239
>gi|338975437|ref|ZP_08630789.1| hypothetical protein CSIRO_3899 [Bradyrhizobiaceae bacterium
SG-6C]
gi|338231368|gb|EGP06506.1| hypothetical protein CSIRO_3899 [Bradyrhizobiaceae bacterium
SG-6C]
Length=239
Score = 155 bits (391), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 89/241 (37%), Positives = 126/241 (53%), Gaps = 4/241 (1%)
Query 1 MSALLDGVLDAHGGLQRWRAAETVHGRVRTGGLLLRTRVPGNRFADYRITVHVQQARTVL 60
M+ LL +++AHGG+ RW + V + +GG L + R+TV + + +
Sbjct 1 MNDLLTNIINAHGGIDRWNSFRKVDATIVSGGALWGMKGLVQDANPRRMTVALHEEFASV 60
Query 61 DPFPRDGYRGVFESGQVRIESHDGAVISSRAHPRAAFFGRSGLRRNIRWDPLDSVYFAGY 120
PF R F ++ IE DG V++ R PRA F G L W PL YF GY
Sbjct 61 TPFGAADQRTSFTPDRIAIEKLDGTVVAERREPRALFDGHEKL---TPWGPLHRAYFNGY 117
Query 121 AMWNYLTTPYLLTREGVAVEEGAPWQQEGETWRRLIVSFPPDIDTHSPRQTFYVDASGLL 180
A+W YLTTP+ L +GV V E PW++ ETWR L FP I THS Q F+ LL
Sbjct 118 ALWTYLTTPFHLVMKGVEVSELEPWREGSETWRVLRARFPTSIATHSDIQDFFFGEDFLL 177
Query 181 RRHDYVPEVVGHWARAAHYCADPVDVDGFVFPTCRWVHPIGPGNRSLPFPTLVSILLTDI 240
RRHDY +V G + AA + D ++ D P+ R + GP +R + P +VSI ++++
Sbjct 178 RRHDYNVDVAGGF-DAAQHVFDYIEADSIKLPSKRLAYTRGPDHRPMLDPLMVSIDISNV 236
Query 241 R 241
R
Sbjct 237 R 237
>gi|298251606|ref|ZP_06975409.1| conserved hypothetical protein [Ktedonobacter racemifer DSM 44963]
gi|297546198|gb|EFH80066.1| conserved hypothetical protein [Ktedonobacter racemifer DSM 44963]
Length=241
Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/227 (40%), Positives = 119/227 (53%), Gaps = 4/227 (1%)
Query 1 MSALLDGVLDAHGGLQRWRAAETVHGRVRTGGLLLRTRVPGNRFADYRITVHVQQARTVL 60
M+ LL V+ AHGGL RW + V V GG L+ + + TV + + + +
Sbjct 1 MNDLLAQVIAAHGGLDRWNTYKKVTATVVAGGGLIPLKGLDDSPIPRERTVSLHEEMSYI 60
Query 61 DPFPRDGYRGVFESGQVRIESHDGAVISSRAHPRAAFFGRSGLRRNIRWDPLDSVYFAGY 120
PF + + VF +V IE+ G ++S R++PRAAF G WD L YF GY
Sbjct 61 SPFGQPDWHMVFTPERVVIENATGEIVSERSNPRAAF---KGHVLETVWDSLHRAYFNGY 117
Query 121 AMWNYLTTPYLLTREGVAVEEGAPWQQEGETWRRLIVSFPPDIDTHSPRQTFYVDASGLL 180
A+W YLTTP+ +T G V E PWQ++GETWR L V FP +HS Q FY LL
Sbjct 118 AIWTYLTTPFFMTMPGFEVTEITPWQEDGETWRGLRVRFPDAFASHSKEQDFYFGDDFLL 177
Query 181 RRHDYVPEVVGHWARAAHYCADPVDVDGFVFPTCRWVHPIGPGNRSL 227
RRHDY E+ G A Y D V+ DG FPT R + GP + +
Sbjct 178 RRHDYHLEIAGG-TPVAQYVYDSVEADGIRFPTKRRAYVCGPQMKPI 223
>gi|197294928|ref|YP_002153469.1| hypothetical protein BCAS0076 [Burkholderia cenocepacia J2315]
gi|195944407|emb|CAR57009.1| conserved hypothetical protein [Burkholderia cenocepacia J2315]
Length=239
Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 88/240 (37%), Positives = 124/240 (52%), Gaps = 4/240 (1%)
Query 1 MSALLDGVLDAHGGLQRWRAAETVHGRVRTGGLLLRTRVPGNRFADYRITVHVQQARTVL 60
M+A+ +LDAHGGL +WR V R+ GG L + D +TV +
Sbjct 1 MNAIAQSILDAHGGLAQWRKFRQVRARLVQGGALWGLKGHAGVLDDTMVTVATDRQWASH 60
Query 61 DPFPRDGYRGVFESGQVRIESHDGAVISSRAHPRAAFFGRSGLRRNIRWDPLDSVYFAGY 120
PF R F ++ + G V+++R PR +F G + WD L +FAG
Sbjct 61 APFGAPAARSEFTGERIALLDSAGHVLAAREQPRGSFDGHT---LETPWDELQLAFFAGC 117
Query 121 AMWNYLTTPYLLTREGVAVEEGAPWQQEGETWRRLIVSFPPDIDTHSPRQTFYVDASGLL 180
AMW YL P++L +GV EE W ++GE WRR+ V +P ++ S QT YV GL+
Sbjct 118 AMWTYLNAPFVLAWDGVHCEEDGVWNEQGEAWRRIRVHYPDTLEVFSKAQTIYVGPDGLV 177
Query 181 RRHDYVPEVVGHWARAAHYCADPVDVDGFVFPTCRWVHPIGPGNRSLPFPTLVSILLTDI 240
RR DY E+ G+ AHY +D V V G FPT R ++P +++P P +VSI L DI
Sbjct 178 RRLDYDVEIAGN-TPGAHYVSDYVTVSGIRFPTKRRIYPRAADGQAVPEPLVVSIDLHDI 236
>gi|118471056|ref|YP_891034.1| hypothetical protein MSMEG_6830 [Mycobacterium smegmatis str.
MC2 155]
gi|118172343|gb|ABK73239.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=242
Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/242 (37%), Positives = 120/242 (50%), Gaps = 4/242 (1%)
Query 2 SALLDGVLDAHGGLQRWRAAETVHGRVRTGGLLLRTRVPGNRFADYRITVHVQQARTVLD 61
S LL L AHGGL RW+ ++ GG + + D TV ++ RT L
Sbjct 5 SDLLQTTLRAHGGLDRWKKLTSISAHRSFGGAIWDIKQVPGIVDDGEFTVWIKDQRTSLR 64
Query 62 PFPRDGYRGVFESGQVRIESHDGAVISSRAHPRAAFFGRSGLRRNIRWDPLDSVYFAGYA 121
PF G + + G+V IE+ DG V+ PR++F G S W L YF GYA
Sbjct 65 PFTAPGLKTAYTPGRVGIETLDGDVVEVLEEPRSSFTGHS---LETPWTALQLAYFTGYA 121
Query 122 MWNYLTTPYLLTREGVAVEEGAPWQQEGETWRRLIVSFPPDIDTHSPRQTFYVDASGLLR 181
MW Y P+ LT GV EEG PW + G WRRL V +P + THS Q Y+D GL+R
Sbjct 122 MWTYTAEPFNLTLPGVQTEEGEPWAENGRRWRRLHVHYPATVATHSSHQVLYIDDDGLIR 181
Query 182 RHDYVPEVVGHWARAAHYCADPVDVDGFVFPTCRWVHPIGPGNRSLPFPTLVSILLTDIR 241
R DY ++ G + AA Y +D +DG V P R ++ N + +VSI LT +
Sbjct 182 RRDYEVDIAGG-SPAAQYVSDHDAIDGIVVPRTRMIYVRAADNHPIHEQLVVSIELTGVT 240
Query 242 VE 243
+
Sbjct 241 LN 242
>gi|254252662|ref|ZP_04945980.1| hypothetical protein BDAG_01901 [Burkholderia dolosa AUO158]
gi|124895271|gb|EAY69151.1| hypothetical protein BDAG_01901 [Burkholderia dolosa AUO158]
Length=239
Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 87/240 (37%), Positives = 123/240 (52%), Gaps = 4/240 (1%)
Query 1 MSALLDGVLDAHGGLQRWRAAETVHGRVRTGGLLLRTRVPGNRFADYRITVHVQQARTVL 60
M+A+ ++DAHGGL++WR V R+ GG L + D +TV +
Sbjct 1 MNAIARSIIDAHGGLEQWRRFRQVRARLVQGGALWSLKGQAGVLDDTTVTVATDRQWASH 60
Query 61 DPFPRDGYRGVFESGQVRIESHDGAVISSRAHPRAAFFGRSGLRRNIRWDPLDSVYFAGY 120
P R F +V + G V++ R HPR +F G + WD L +FAG
Sbjct 61 APVGTVAARSEFTGERVALLDSSGRVLAEREHPRRSFDGHT---LETAWDELQLAFFAGC 117
Query 121 AMWNYLTTPYLLTREGVAVEEGAPWQQEGETWRRLIVSFPPDIDTHSPRQTFYVDASGLL 180
AMW YL P++L +GV+ +E W + GE+WRR+ V +P ++ S QT YV L+
Sbjct 118 AMWTYLNAPFVLAWDGVSCDEDGIWNEHGESWRRIRVRYPDTLEVFSKTQTIYVGPDDLI 177
Query 181 RRHDYVPEVVGHWARAAHYCADPVDVDGFVFPTCRWVHPIGPGNRSLPFPTLVSILLTDI 240
RR DY E+ G+ AHY +D V G FPT R ++P P +LP P +VSI L DI
Sbjct 178 RRLDYDVEIAGN-TPGAHYVSDYTTVSGIRFPTKRRIYPRTPDGHALPEPLVVSIDLHDI 236
>gi|161521713|ref|YP_001585140.1| hypothetical protein Bmul_5178 [Burkholderia multivorans ATCC
17616]
gi|189352122|ref|YP_001947749.1| hypothetical protein BMULJ_03340 [Burkholderia multivorans ATCC
17616]
gi|160345763|gb|ABX18848.1| conserved hypothetical protein [Burkholderia multivorans ATCC
17616]
gi|189336144|dbj|BAG45213.1| conserved hypothetical protein [Burkholderia multivorans ATCC
17616]
Length=239
Score = 152 bits (383), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 87/240 (37%), Positives = 124/240 (52%), Gaps = 4/240 (1%)
Query 1 MSALLDGVLDAHGGLQRWRAAETVHGRVRTGGLLLRTRVPGNRFADYRITVHVQQARTVL 60
M+ + V+DAHGGL +WR V R+ GG L + + +TV +
Sbjct 1 MNTIAQSVIDAHGGLAQWRKFRQVSARLVQGGALWGLKGFAGVLDETTVTVATDRQWASH 60
Query 61 DPFPRDGYRGVFESGQVRIESHDGAVISSRAHPRAAFFGRSGLRRNIRWDPLDSVYFAGY 120
P R F ++ + G V++ R PR +F G + RWD L +FAG
Sbjct 61 APVGALAARSEFTGDRIALLDSAGRVLAEREDPRGSFDGHA---LETRWDELQLAFFAGC 117
Query 121 AMWNYLTTPYLLTREGVAVEEGAPWQQEGETWRRLIVSFPPDIDTHSPRQTFYVDASGLL 180
AMW YL P++L +GV ++ W+++GETWRR+ V +P ++ S QT YV GL+
Sbjct 118 AMWTYLNVPFVLAWDGVRCDDDGVWEEQGETWRRIRVHYPDTLEVFSKAQTIYVGPDGLI 177
Query 181 RRHDYVPEVVGHWARAAHYCADPVDVDGFVFPTCRWVHPIGPGNRSLPFPTLVSILLTDI 240
RR DY E+ G+ A AHY +D V G FPT R ++P P +LP P +VSI L DI
Sbjct 178 RRLDYDVEIAGNTA-GAHYVSDYTTVSGIRFPTKRRIYPRTPDGHALPEPLVVSIDLHDI 236
>gi|330821768|ref|YP_004350630.1| hypothetical protein bgla_2g27000 [Burkholderia gladioli BSR3]
gi|327373763|gb|AEA65118.1| hypothetical protein bgla_2g27000 [Burkholderia gladioli BSR3]
Length=239
Score = 148 bits (374), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 84/243 (35%), Positives = 122/243 (51%), Gaps = 4/243 (1%)
Query 1 MSALLDGVLDAHGGLQRWRAAETVHGRVRTGGLLLRTRVPGNRFADYRITVHVQQARTVL 60
MS L+D ++A GGL ++R +V + G++ R + + R+ V + + R
Sbjct 1 MSDLIDLAIEAAGGLDKFRGFRSVSANLHHSGVIWRLKQREGVLTNSRVKVQLHEQRVSH 60
Query 61 DPFPRDGYRGVFESGQVRIESHDGAVISSRAHPRAAFFGRSGLRRNIRWDPLDSVYFAGY 120
F V+ +V I D +++ + PR +F G W YFAGY
Sbjct 61 TAFAPSSNHSVYTPSRVEIRREDDSLVEALDAPRDSF---DGFEMETPWSNAQLAYFAGY 117
Query 121 AMWNYLTTPYLLTREGVAVEEGAPWQQEGETWRRLIVSFPPDIDTHSPRQTFYVDASGLL 180
MW YL +P+LL GV +E PW+ +G WRRL V FP + THS QTFY D LL
Sbjct 118 TMWTYLNSPFLLRHAGVQAKEVEPWRVDGLPWRRLRVEFPRHLATHSAVQTFYFDRDHLL 177
Query 181 RRHDYVPEVVGHWARAAHYCADPVDVDGFVFPTCRWVHPIGPGNRSLPFPTLVSILLTDI 240
RRHDY ++ G A AA Y +D V+V G PT ++P P N +L P +V + L++
Sbjct 178 RRHDYEVDIQGRNA-AARYLSDYVEVQGIRMPTRFRIYPRTPANEALAEPLIVGVDLSNF 236
Query 241 RVE 243
E
Sbjct 237 HFE 239
>gi|256421252|ref|YP_003121905.1| hypothetical protein Cpin_2212 [Chitinophaga pinensis DSM 2588]
gi|256036160|gb|ACU59704.1| conserved hypothetical protein [Chitinophaga pinensis DSM 2588]
Length=243
Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/242 (36%), Positives = 123/242 (51%), Gaps = 5/242 (2%)
Query 1 MSALLDGVLDAHGGLQRWRAAETVHGRVRTGGLLLRTRVPGNRFADYRITVHVQQARTVL 60
++ LL VL+AHGG++RW A + + V+ GGL + +D + + + +
Sbjct 4 INELLSRVLEAHGGMERWNALQHIKAHVQIGGLTWTIKGHEGILSDIVFSGALHEQKASW 63
Query 61 DPFPRDGYRGVFESGQVRIESHDGAVISSRAHPRAAFFGRSGLRRNIRWDPLDSVYFAGY 120
G+ F++ +V + +G ++ +P A+F G + W + +YF Y
Sbjct 64 ASIYAPGWTSAFDANRVALLDAEGKLVEELHNPSASFAGHT---IETPWSRMQLIYFCSY 120
Query 121 AMWNYLTTPYLLTREGVAVEEGAPWQQEGETWRRLIVSFPPDIDTHSPRQTFYVDASGLL 180
A WNYLTTP+ T G V E PWQ+E ETWRRL V FP I THS +Q FY D L
Sbjct 121 ATWNYLTTPFNFTLHGYQVNEIEPWQEEKETWRRLEVIFPDTIATHSKKQLFYFDQDFHL 180
Query 181 RRHDYVPEVVGHWARAAHYCADPVDVDGFVFPTCRWVHPIGPGNRSLPF-PTLVSILLTD 239
RRHDY PEV+G A A + D G T R ++ + + S P LVSI + D
Sbjct 181 RRHDYWPEVLGG-AAATQIISGYKDFSGIKTGTERRIYILNDADNSYQTEPVLVSIDVLD 239
Query 240 IR 241
I+
Sbjct 240 IQ 241
>gi|294010135|ref|YP_003543595.1| hypothetical protein SJA_C1-01490 [Sphingobium japonicum UT26S]
gi|292673465|dbj|BAI94983.1| hypothetical protein SJA_C1-01490 [Sphingobium japonicum UT26S]
Length=238
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/243 (38%), Positives = 128/243 (53%), Gaps = 8/243 (3%)
Query 1 MSALLDGVLDAHGGLQRWRAAETVHGRVRTGGLLL-RTRVPGNRFADYRITVHVQQARTV 59
M+ L+ +DAHGG +RW A ++V V TGG LL R PG+ RIT Q+
Sbjct 1 MNKLIADAIDAHGGWERWEALKSVQVDVVTGGELLDRKTAPGS--GTLRITAKTQRQECR 58
Query 60 LDPFPRDGYRGVFESGQVRIESHDGAVISSRAHPRAAFFGRSGLRRNIRWDPLDSVYFAG 119
+ P D + E G+V IE+ DG +++ R PRAAF +G + WDPL YF
Sbjct 59 MGPIDGDMIT-ILEPGRVAIETADGTLVAERHDPRAAF---NGHELDTPWDPLHRTYFGC 114
Query 120 YAMWNYLTTPYLLTREGVAVEEGAPWQQEGETWRRLIVSFPPDIDTHSPRQTFYVDASGL 179
YAMW+YLT P+ L GV V + P +++GE W+ + V P +I THS Q FY L
Sbjct 115 YAMWSYLTVPFSLAMPGVQVWDIDPLEEDGELWQGVRVVMPDEIATHSRAQEFYFGDDML 174
Query 180 LRRHDYVPEVVGHWARAAHYCADPVDVDGFVFPTCRWVHPIGPGNRSLPFPTLVSILLTD 239
+RR DY ++ G R A+Y D V VDG F + R + L L+ + L++
Sbjct 175 IRRQDYTLDIAGG-HRIANYALDIVSVDGLKFASKRRAYMCNKKYEVLRDRLLIRLDLSN 233
Query 240 IRV 242
++
Sbjct 234 FQL 236
>gi|107025526|ref|YP_623037.1| hypothetical protein Bcen_3168 [Burkholderia cenocepacia AU 1054]
gi|116693293|ref|YP_838826.1| hypothetical protein Bcen2424_5200 [Burkholderia cenocepacia
HI2424]
gi|170737437|ref|YP_001778697.1| hypothetical protein Bcenmc03_5077 [Burkholderia cenocepacia
MC0-3]
gi|105894900|gb|ABF78064.1| conserved hypothetical protein [Burkholderia cenocepacia AU 1054]
gi|116651293|gb|ABK11933.1| conserved hypothetical protein [Burkholderia cenocepacia HI2424]
gi|169819625|gb|ACA94207.1| conserved hypothetical protein [Burkholderia cenocepacia MC0-3]
Length=239
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/242 (33%), Positives = 120/242 (50%), Gaps = 4/242 (1%)
Query 1 MSALLDGVLDAHGGLQRWRAAETVHGRVRTGGLLLRTRVPGNRFADYRITVHVQQARTVL 60
M+ + ++DAHGG+++WR V + GG L + R++V +
Sbjct 1 MNKVAQSIIDAHGGIEQWRKFREVRADLIQGGALWGLKGQSGVLDRTRVSVATDRQWASH 60
Query 61 DPFPRDGYRGVFESGQVRIESHDGAVISSRAHPRAAFFGRSGLRRNIRWDPLDSVYFAGY 120
PF R F ++ + G VI ++A PR F G + W+ L +FAG
Sbjct 61 APFATVAARSEFTGDRIALLDDSGRVIEAQAQPRELFAGHT---LETPWNALQLAFFAGC 117
Query 121 AMWNYLTTPYLLTREGVAVEEGAPWQQEGETWRRLIVSFPPDIDTHSPRQTFYVDASGLL 180
AMW YL +P+LL +GV E+ PW ++GE WR++ V +P ++ S Q YV L+
Sbjct 118 AMWTYLNSPFLLAFDGVECEDVGPWSEQGERWRKIHVVYPATLEVFSKVQAMYVGPDNLI 177
Query 181 RRHDYVPEVVGHWARAAHYCADPVDVDGFVFPTCRWVHPIGPGNRSLPFPTLVSILLTDI 240
RR DY E+ G+ AHY +D V V G P R ++P P S+ P +VSI L +I
Sbjct 178 RRLDYDVEIAGN-TPGAHYVSDYVTVSGIRVPMRRRIYPRMPDGTSISEPLVVSIDLENI 236
Query 241 RV 242
+
Sbjct 237 EL 238
>gi|330821766|ref|YP_004350628.1| hypothetical protein bgla_2g26980 [Burkholderia gladioli BSR3]
gi|327373761|gb|AEA65116.1| hypothetical protein bgla_2g26980 [Burkholderia gladioli BSR3]
Length=240
Score = 138 bits (347), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 82/243 (34%), Positives = 120/243 (50%), Gaps = 5/243 (2%)
Query 1 MSALLDGVLDAHGGLQRWRAAETVHGRVRTGGLLLRTRVPGNRFADYRITVHVQQARTVL 60
M+ + ++DAHGGL +WR T+ + GG L + +TV +
Sbjct 1 MNPIAKSIIDAHGGLAQWRKFHTIRADLVQGGALWGLKGQSGVLDRTGVTVATDRQWASH 60
Query 61 DPFPRDGYRGVFESGQVRI-ESHDGAVISSRAHPRAAFFGRSGLRRNIRWDPLDSVYFAG 119
PF R F + + + + V+ + PRA+F G + W PL +FAG
Sbjct 61 APFGALAARSEFTGESIALLDDAEHVVVEAHGAPRASFDGHT---LETPWSPLQLAFFAG 117
Query 120 YAMWNYLTTPYLLTREGVAVEEGAPWQQEGETWRRLIVSFPPDIDTHSPRQTFYVDASGL 179
AMW YL TP+LL EGV E+ WQ+ GETWR++ + +P ++ S Q YV L
Sbjct 118 CAMWTYLNTPFLLAWEGVECEDAGDWQEHGETWRKIELHYPSSLEVFSQAQAIYVGPDKL 177
Query 180 LRRHDYVPEVVGHWARAAHYCADPVDVDGFVFPTCRWVHPIGPGNRSLPFPTLVSILLTD 239
+RR DY E+ G+ AHY +D V G PT R ++P P SL P +VSI L++
Sbjct 178 VRRLDYDVEIAGN-TPGAHYVSDYATVSGIRIPTRRRIYPRLPDGGSLAEPLVVSIDLSN 236
Query 240 IRV 242
I +
Sbjct 237 ITL 239
>gi|300785511|ref|YP_003765802.1| hypothetical protein AMED_3617 [Amycolatopsis mediterranei U32]
gi|299795025|gb|ADJ45400.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
gi|340526958|gb|AEK42163.1| hypothetical protein RAM_18385 [Amycolatopsis mediterranei S699]
Length=235
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/240 (35%), Positives = 116/240 (49%), Gaps = 8/240 (3%)
Query 1 MSALLDGVLDAHGGLQRWRAAETVHGRVRTGGLLLRTRVPGNRFADYRITVHVQQARTVL 60
M+ LL + AHGGL RW + G + + + D R V + R +
Sbjct 1 MNDLLATAVAAHGGLDRWNRIRAIRVAATITGAFWQVKGKSDAMKDVRFEVDTTRERLTM 60
Query 61 DPFPRDGYRGVFESGQVRIESHDGAVISSRAHPRAAFFGRSGLRRNIRWDPLDSVYFAGY 120
D F R +FE G+V ++ DG + +R P +F G WD L YF G
Sbjct 61 D-FAGQNRRSIFEPGRVVLQQPDGTIADARDDPERSFDGHG---FQTPWDDLHLAYFTGE 116
Query 121 AMWNYLTTPYLLTREGVAVEEGAPWQQEGETWRRLIVSFPPDIDTHSPRQTFYVDASGLL 180
A+W YLTTP+L T G +E AP + +GETWRRL V+FP I +HS Q F GLL
Sbjct 117 ALWTYLTTPFLFTWPGFVCDEIAPIEGDGETWRRLKVTFPGHIKSHSREQVFCFGPDGLL 176
Query 181 RRHDYVPEVVGHWARAAHYCADPVDVDGFVFPTCRWVHPIGPGNRSLPFPTLVSILLTDI 240
RRHD+ ++V A + D+DG + P R + +R++ LV+I + DI
Sbjct 177 RRHDFTIDIVDPDTEAQLHAGGYRDIDGIIIPATRRAYTTTGEDRTV----LVAIDMADI 232
>gi|297156017|gb|ADI05729.1| hypothetical protein SBI_02608 [Streptomyces bingchenggensis
BCW-1]
Length=245
Score = 128 bits (321), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 87/216 (41%), Positives = 116/216 (54%), Gaps = 18/216 (8%)
Query 2 SALLDGVLDAHGGLQRWRAAETVHGRVRTGGLLLR-TRVPGNRFADYRITVHVQQARTVL 60
+A+LD L A+GG RW +AE + + GGLL R R F IT V + R
Sbjct 10 AAVLDRTLAAYGGAGRWASAERIEAELSCGGLLFRWKRGSAGTFDRMHITAEVARQRIRF 69
Query 61 DPFPRDG-YRGVFESGQVRIESHDGAVISSRAHPRAAFFGRSGLRRNIRWDPLDSVYFAG 119
F DG GV E +VR+E DGAV++ R RA F G RR +RWD LD +YF G
Sbjct 70 HGF--DGPLDGVLEGHEVRLE-RDGAVVARRVDARAPF---PGGRRLLRWDSLDMMYFLG 123
Query 120 YAMWNYLTTPYLLTREGVAVEEGAPWQQEGETWRRLIVSFPPDIDTHSPRQTFYVD-ASG 178
YA+WNYL P LL RE ++ W+ +G L+ FP + TH P+Q F +D A+G
Sbjct 124 YALWNYLAFPALLRREDMS------WRADGPD--ALLARFPEHLATHCPQQRFRLDPATG 175
Query 179 LLRRHDYVPEVVGH-WARAAHYCADPVDVDGFVFPT 213
L+ H+Y EV G WA A H ++ D DG + +
Sbjct 176 LVTEHEYTAEVFGRSWAHACHLTSEYRDADGVPYAS 211
>gi|27381379|ref|NP_772908.1| hypothetical protein blr6268 [Bradyrhizobium japonicum USDA 110]
gi|27354546|dbj|BAC51533.1| blr6268 [Bradyrhizobium japonicum USDA 110]
Length=235
Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/241 (34%), Positives = 110/241 (46%), Gaps = 7/241 (2%)
Query 3 ALLDGVLDAHGGLQRWRAAETVHGRVRTGGLLLRTRVPGNRFADYRITVHVQQARTVLDP 62
ALL V+DA GGL RW + + GG+L + F D +
Sbjct 2 ALLHDVIDASGGLDRWSSLNRFTLHLSVGGMLFSSAGHAREFKDVTAEGSTRTQSVRFTG 61
Query 63 FPRDGYRGVFESGQVRIESHDGAVISSRAHPRAAFFGRSGLRRNIRWDPLDSVYFAGYAM 122
+ G F+ + IES DG V+ + +P AF S D L V+F G A+
Sbjct 62 ITGGEHSGSFQPDAITIESLDGEVLRTWRNPSLAFPEASAPALA---DELHLVFFCGVAI 118
Query 123 WNYLTTPYLLTREGVAVEEGAPWQQEGETWRRLIVSFPPDIDTHSPRQTFYVDASGLLRR 182
WNYLT P+LL V +EE +PW + ETWRRL FP + T +P Q FY D S L RR
Sbjct 119 WNYLTIPFLLAHPDVVLEELSPWSEGTETWRRLRAQFPAHLITLAPEQIFYFDQSALQRR 178
Query 183 HDYVPEVVGHWARAAHYCADPVDVDGFVFPTCRWVHPIGPGNRSLPFPTLVSILLTDIRV 242
D+ ++ G + AHY + G V PT R V + + P L+ + + D
Sbjct 179 TDH--DLFG--MKVAHYSWAHDNFAGIVVPTLRRVQTLQADGTVIARPVLMDVEIFDAVF 234
Query 243 E 243
E
Sbjct 235 E 235
>gi|189345793|ref|YP_001942322.1| hypothetical protein Clim_0248 [Chlorobium limicola DSM 245]
gi|189339940|gb|ACD89343.1| conserved hypothetical protein [Chlorobium limicola DSM 245]
Length=240
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/246 (35%), Positives = 119/246 (49%), Gaps = 17/246 (6%)
Query 1 MSALLDGVLDAHGGLQRWRAAETVHGRVRTGGLLLR-TRVPGNRFADYRITVHVQQARTV 59
++ + ++A+GG W+ A T+ V GL R P R A RI V + +V
Sbjct 3 LTETAEKAIEAYGGCSLWQNAGTLETEVSAYGLAFTLKRRPFFRHA--RIVEEVHRPFSV 60
Query 60 LDPFPRD-GYRGVFESGQVRIESHDGAVISSRAHPRAAFFGRSGLRRNIRWDPLDSVYFA 118
L P R+ G G+ + VR+E +G VI+ R R F R G RR + WD LD YFA
Sbjct 61 LTPIGRNPGVTGILDGHSVRLEDENGRVIAERRSARDYF--RIG-RRLLWWDDLDMSYFA 117
Query 119 GYAMWNYLTTPYLLTREGVAVEEGAPWQQEGETWRRLIVSFPPDIDTHSPRQTFYVD-AS 177
YA WNY T P LL E +A E P E FP I THS Q F + S
Sbjct 118 NYASWNYFTLPALLMNEEIAWRELEPGLLEAR--------FPDGIPTHSSVQRFRFERES 169
Query 178 GLLRRHDYVPEVVGHWARAAHYCADPV-DVDGFVFPTCRWVHPIGPGNRSLPFPTLVSIL 236
G L +HDY E++ ARA++ + G ++P+ R V P GP R L P L+ +
Sbjct 170 GRLLQHDYTAEIISPLARASNVVLQHARNSAGLLYPSVRRVTPRGPKGRPLARPVLIHLD 229
Query 237 LTDIRV 242
+ + R+
Sbjct 230 IHEYRL 235
>gi|110597646|ref|ZP_01385931.1| conserved hypothetical protein [Chlorobium ferrooxidans DSM 13031]
gi|110340766|gb|EAT59243.1| conserved hypothetical protein [Chlorobium ferrooxidans DSM 13031]
Length=240
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/247 (35%), Positives = 115/247 (47%), Gaps = 17/247 (6%)
Query 1 MSALLDGVLDAHGGLQRWRAAETVHGRVRTGGL-LLRTRVPGNRFADYRITVHVQQARTV 59
+S + + A+GG + W+ A T+ V GL + R P F R+ + V + +
Sbjct 3 LSDTAEKAVAAYGGREFWQNAGTLEVEVSAKGLAFILKRRPF--FNHARMVLDVHRPYST 60
Query 60 LDPFPRD-GYRGVFESGQVRIESHDGAVISSRAHPRAAFFGRSGLRRNIRWDPLDSVYFA 118
L P D GV + VR+E+ DG VI R R F + G RR WD LD YFA
Sbjct 61 LIPIGLDPAITGVLDGPDVRLENEDGEVIVERRKARDYF--KVG-RRLFYWDDLDMSYFA 117
Query 119 GYAMWNYLTTPYLLTREGVAVEEGAPWQQEGETWRRLIVSFPPDIDTHSPRQTFYVD-AS 177
YA WNY T P LL RE + E P E FP I THS Q F D +
Sbjct 118 NYASWNYFTLPALLMREDINWREVEPGLLEAR--------FPDKIPTHSRVQRFRFDRKT 169
Query 178 GLLRRHDYVPEVVGHWARAAHYCA-DPVDVDGFVFPTCRWVHPIGPGNRSLPFPTLVSIL 236
GLL +HDY +++ A A++ + G ++P+ R V P GP L P L+ +
Sbjct 170 GLLIQHDYTAQIISPLAAASNVVLHHAKNSAGILYPSVRRVTPTGPNGMPLGGPVLIHLD 229
Query 237 LTDIRVE 243
+ D RV
Sbjct 230 IHDYRVN 236
>gi|194337611|ref|YP_002019405.1| hypothetical protein Ppha_2628 [Pelodictyon phaeoclathratiforme
BU-1]
gi|194310088|gb|ACF44788.1| conserved hypothetical protein [Pelodictyon phaeoclathratiforme
BU-1]
Length=239
Score = 104 bits (260), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 79/241 (33%), Positives = 115/241 (48%), Gaps = 17/241 (7%)
Query 6 DGVLDAHGGLQRWRAAETVHGRVRTGGLLLRTRVPGNRFADY-RITVHVQQARTVLDPFP 64
+ + A+GG + W+ A+ V + GL + G F + ++ + + T L P
Sbjct 8 EKAIAAYGGRELWQNAKRVEVEMSASGLAFTLK--GRPFFHHAKMVLDAHRPFTSLTPIG 65
Query 65 RD-GYRGVFESGQVRIESHDGAVISSRAHPRAAFFGRSGLRRNIRWDPLDSVYFAGYAMW 123
R+ RGV + VR+E G VI+ R + R F + G RR WD LD YFA YA W
Sbjct 66 RNPAVRGVLDGLDVRLEDEQGKVIADRRNARDYF--KIG-RRLFWWDDLDMSYFANYASW 122
Query 124 NYLTTPYLLTREGVAVEEGAPWQQEGETWRRLIVSFPPDIDTHSPRQTFYVD-ASGLLRR 182
NY T P LL E + +E P E + FP I THS Q F D +GLL +
Sbjct 123 NYFTLPALLMSEEILWKELEPGFLEAQ--------FPDAIPTHSRVQQFRFDLQTGLLIQ 174
Query 183 HDYVPEVVGHWARAAHYCAD-PVDVDGFVFPTCRWVHPIGPGNRSLPFPTLVSILLTDIR 241
HDY +++ A A++ + G V+P+ R V P GP + P L+ + + D R
Sbjct 175 HDYTAQIISPLAIASNVVLQHAKNSTGLVYPSIRRVTPKGPKGKPFGAPVLIRLDIHDYR 234
Query 242 V 242
V
Sbjct 235 V 235
>gi|116330489|ref|YP_800207.1| hypothetical protein LBJ_0784 [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|116124178|gb|ABJ75449.1| Hypothetical protein LBJ_0784 [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length=236
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/235 (31%), Positives = 113/235 (49%), Gaps = 13/235 (5%)
Query 5 LDGVLDAHGGLQRWRAAETVHGRVR-TGGLLLRTRVPGNRFADY-RITVHVQQARTVLDP 62
L+ ++D +GG + W + V R GG L + G F Y + V ++
Sbjct 4 LEKIVDRYGGWKLWDRLDFVEFYFRHLGGPLPLLKGLGKTFGKYGNVRVFPKKFIAEFLE 63
Query 63 FPRDGYRGVFESGQVRI-ESHDGAVISSRAHPRAAFFGRSGLRRNIRWDPLDSVYFAGYA 121
+P G + VF++ +V I + D + + + R +F GLR+ RW+ LD+ YF GYA
Sbjct 64 YPAPGKKIVFQNVKVGIFNADDDSDTFTIPNYRDSF---RGLRKYRRWNSLDASYFFGYA 120
Query 122 MWNYLTTPYLLTREGVAVEEGAPWQQEGETWRRLIVSFPPDIDTHSPRQTFYVDASGLLR 181
+ YL+ P++L V E A + + V FP + TH +Q++ D GLL
Sbjct 121 VTQYLSVPFILKEYTVREVELA------DGGAHIDVEFPQYLHTHCEKQSYRFDKEGLLV 174
Query 182 RHDYVPEVVGHWARAAHYCADPVDVDGFVFPTCRWVHPIGPGNRSLPFPTLVSIL 236
R+DY ++VG WA+ AH+ ++ G PT R V + G P P L + L
Sbjct 175 RNDYTADIVGPWAKGAHFTTHFQEIGGLPIPTKRNVF-VRLGGFVTPIPVLSAEL 228
>gi|333814327|gb|AEG06995.1| hypothetical protein SinmeB_5780 [Sinorhizobium meliloti BL225C]
Length=238
Score = 91.7 bits (226), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/185 (33%), Positives = 82/185 (45%), Gaps = 6/185 (3%)
Query 1 MSALLDGVLDAHGGLQRWRAAETVHGRVRTGGLLLRTRVPGNRFADYRITVHVQQARTVL 60
M+ LLD V+ AHG RW + V G L V G +ITV+ AR ++
Sbjct 1 MNKLLDKVMVAHGSPSRWNDHQVVRAAALIAGDLCGNGVSGTT---RQITVYPHLARALV 57
Query 61 DPFPRDGYRGVFESGQVRIESHDGAVISSRAHPRAAFFGRSGLRRNIRWDPLDSVYFAGY 120
+P R + ++ I DG VIS R R D + + A
Sbjct 58 EPSGSPSCRSDLVANRLSIIREDGTVISEIEDVRTMPMNYDP---KARTDKVFGAFLACC 114
Query 121 AMWNYLTTPYLLTREGVAVEEGAPWQQEGETWRRLIVSFPPDIDTHSPRQTFYVDASGLL 180
+ LTTP+LL +GV V E PW ++G+ WR L FPP DT + F+ LL
Sbjct 115 TVRTLLTTPFLLAMKGVEVNELIPWNEDGDRWRVLRAEFPPGFDTAARVHDFFFGGDFLL 174
Query 181 RRHDY 185
RRHDY
Sbjct 175 RRHDY 179
>gi|116328904|ref|YP_798624.1| hypothetical protein LBL_2295 [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116121648|gb|ABJ79691.1| Hypothetical protein LBL_2295 [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
Length=236
Score = 91.7 bits (226), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/235 (31%), Positives = 113/235 (49%), Gaps = 13/235 (5%)
Query 5 LDGVLDAHGGLQRWRAAETVHGRVR-TGGLLLRTRVPGNRFADY-RITVHVQQARTVLDP 62
L+ ++D +GG + W + V R GG L + G F Y + V ++
Sbjct 4 LEKIVDRYGGWKLWDRLDFVEFYFRHLGGPLPLLKGLGKTFGKYGNVRVFPKKFIAEFLE 63
Query 63 FPRDGYRGVFESGQVRI-ESHDGAVISSRAHPRAAFFGRSGLRRNIRWDPLDSVYFAGYA 121
+P G + VF++ +V I + D + + + R +F GLR+ RW+ LD+ YF GYA
Sbjct 64 YPAPGKKIVFQNVKVGIFNADDDSDTFTIPNYRDSF---RGLRKYRRWNSLDASYFFGYA 120
Query 122 MWNYLTTPYLLTREGVAVEEGAPWQQEGETWRRLIVSFPPDIDTHSPRQTFYVDASGLLR 181
+ YL+ P++L V E A + + V FP + TH +Q++ D GLL
Sbjct 121 VTQYLSVPFILKEYTVREVELA------DGGVHIDVEFPQYLHTHCEKQSYRFDKEGLLV 174
Query 182 RHDYVPEVVGHWARAAHYCADPVDVDGFVFPTCRWVHPIGPGNRSLPFPTLVSIL 236
R+DY ++VG WA+ AH+ ++ G PT R V + G P P L + L
Sbjct 175 RNDYTADIVGPWAKGAHFTTHFQEIGGLPIPTKRNVF-VRLGGFVTPIPVLSAEL 228
>gi|92116326|ref|YP_576055.1| hypothetical protein Nham_0710 [Nitrobacter hamburgensis X14]
gi|91799220|gb|ABE61595.1| hypothetical protein Nham_0710 [Nitrobacter hamburgensis X14]
Length=241
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/147 (36%), Positives = 78/147 (54%), Gaps = 6/147 (4%)
Query 48 RITVHVQQARTVLDPFPRDGYRGVFESGQVRIESHDGAVISSRAHPRAAFFGRSGLRRNI 107
R+ +H Q ++PF + G R F ++ I + + ++ R +PR +F G
Sbjct 14 RVDLHRQWGS--VEPFGKTGQRIDFTPERIAIITRE-TTVAERRNPRDSFAGHD---MRT 67
Query 108 RWDPLDSVYFAGYAMWNYLTTPYLLTREGVAVEEGAPWQQEGETWRRLIVSFPPDIDTHS 167
WD L YF+G A+W Y+TTP+LL +G V E PW++ E R L +FP I +H
Sbjct 68 SWDVLHHAYFSGCALWTYMTTPFLLVMDGFQVREIEPWREGIEIRRGLRATFPATIASHC 127
Query 168 PRQTFYVDASGLLRRHDYVPEVVGHWA 194
Q FY L+RRHDY E+ G++A
Sbjct 128 VEQDFYFGPDMLMRRHDYKVEIAGNFA 154
>gi|45657069|ref|YP_001155.1| hypothetical protein LIC11185 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|45600306|gb|AAS69792.1| conserved hypothetical protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
Length=236
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/216 (28%), Positives = 108/216 (50%), Gaps = 16/216 (7%)
Query 5 LDGVLDAHGGLQRWRAAETVHGRVRT-GGLLLRTRVPGNRFADY-RITVHVQQARTVLDP 62
+ +++ +GG + W + V ++ G L + G F + ++ + ++ T
Sbjct 4 FEKIVNRYGGWELWNRLDFVEFYFQSLSGPLPFLKGLGKTFNKHGKVRIFPKEFITEFLD 63
Query 63 FPRDGYRGVFESGQVRIES-HDGAVISSRAHPRAAFFGRSGLRRNIRWDPLDSVYFAGYA 121
+P G + +F++G+V I + + ++ + +F SGL++ W+PLD YF GYA
Sbjct 64 YPNPGKKIIFKNGKVGIVNISENLSEFGLSNYKDSF---SGLKKYRLWNPLDVSYFFGYA 120
Query 122 MWNYLTTPYLLTREGV-AVE-EGAPWQQEGETWRRLIVSFPPDIDTHSPRQTFYVDASGL 179
Y++ P++L V E E +Q E E FP + TH +Q++ D+ GL
Sbjct 121 TTQYVSIPFILKEYSVRKFELENGDFQIEAE--------FPSYLHTHCKKQSYRFDSEGL 172
Query 180 LRRHDYVPEVVGHWARAAHYCADPVDVDGFVFPTCR 215
L R+DY ++VG WA+ AH+ D++GF T R
Sbjct 173 LIRNDYTADIVGSWAKGAHFTTHFQDIEGFPMATKR 208
>gi|227818802|ref|YP_002822773.1| hypothetical protein NGR_b05610 [Sinorhizobium fredii NGR234]
gi|36959058|gb|AAQ87483.1| Hypothetical protein RNGR00358 [Sinorhizobium fredii NGR234]
gi|227337801|gb|ACP22020.1| hypothetical protein NGR_b05610 [Sinorhizobium fredii NGR234]
Length=187
Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 81/160 (51%), Gaps = 4/160 (2%)
Query 1 MSALLDGVLDAHGGLQRWRAAETVHGRVRTGGLLLRTRVPGNRFADYRITVHVQQARTVL 60
+ LL+ L+AHGG RWR + + +RTGG L + R T ++ T +
Sbjct 5 LHPLLEEALEAHGGHDRWRKFKGIASTIRTGGKLWELKGAPLIPVPRRATSEFRRQWTRV 64
Query 61 DPFPRDGYRGVFESGQVRIESHDGAVISSRAHPRAAFFGRSGLRRNIRWDPLDSVYFAGY 120
PF + + V I + DG++I+ R + R AF RS N +WDPL+ YF GY
Sbjct 65 TPFGEPDWTMSWTPEHVEIRAGDGSIIAERDNGREAF-DRS---FNGQWDPLNLAYFNGY 120
Query 121 AMWNYLTTPYLLTREGVAVEEGAPWQQEGETWRRLIVSFP 160
AMW Y TP++ G + AP + +GET R + V FP
Sbjct 121 AMWTYHATPFVFGEPGYEARDVAPIENDGETLRGVAVRFP 160
>gi|15616370|ref|NP_244675.1| arginyl-tRNA synthetase [Bacillus halodurans C-125]
gi|20139930|sp|Q9K6C1.1|SYR1_BACHD RecName: Full=Arginyl-tRNA synthetase 1; AltName: Full=Arginine--tRNA
ligase 1; Short=ArgRS 1
gi|10176433|dbj|BAB07527.1| arginyl-tRNA synthetase [Bacillus halodurans C-125]
Length=556
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/123 (26%), Positives = 53/123 (44%), Gaps = 9/123 (7%)
Query 41 GNRFADYRITVHVQ--QARTVLDPFPRDGYRG--VFESGQVRIESHDGAVISSRAHPRAA 96
GN+ + +++ + QA + P DGY G + + G+ E+H + + R A
Sbjct 173 GNQINNLALSLEARYFQALGMEKDMPEDGYHGEDIIQFGKDLAETHGDKFVHESSEERLA 232
Query 97 FFGRSGLRRNIRWDPLDSVYFAG-----YAMWNYLTTPYLLTREGVAVEEGAPWQQEGET 151
FF GL+R + D F Y+ + TT + V E+G ++Q+G
Sbjct 233 FFREYGLKRELEKIKSDLEEFRVPFDNWYSETSLYTTGKVEKTLNVLKEKGKTYEQDGAL 292
Query 152 WRR 154
W R
Sbjct 293 WFR 295
>gi|242077724|ref|XP_002448798.1| hypothetical protein SORBIDRAFT_06g033370 [Sorghum bicolor]
gi|241939981|gb|EES13126.1| hypothetical protein SORBIDRAFT_06g033370 [Sorghum bicolor]
Length=577
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 40/134 (30%), Positives = 55/134 (42%), Gaps = 21/134 (15%)
Query 8 VLDAHGGLQRWRAAETVHGRVRTGGLLLRTRVPGNRFADYRITVHVQQARTVLDPFPRDG 67
V+DA L+ WRAAE VH RV GL V + A Y + AR V D F RD
Sbjct 122 VVDACARLRMWRAAEAVHCRVLKEGLAAVPAVSSSLLAFYVARGSLGDARRVFDGF-RDK 180
Query 68 YRGVFESGQVRIESHDGAVISSRAHPRAAFFGRSGLRRNIRWDPLDSVYFAGYAMWNYLT 127
G+ + V + G V S+R + D++ WN +
Sbjct 181 SIGL-SNRMVSVYVRAGDVTSAR-------------------EVFDAMETRDVVSWNAML 220
Query 128 TPYLLTREGVAVEE 141
T Y+ T + VA +E
Sbjct 221 TAYVRTADIVAAKE 234
>gi|319954253|ref|YP_004165520.1| hypothetical protein Celal_2740 [Cellulophaga algicola DSM 14237]
gi|319422913|gb|ADV50022.1| hypothetical protein Celal_2740 [Cellulophaga algicola DSM 14237]
Length=270
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 41/167 (25%), Positives = 64/167 (39%), Gaps = 41/167 (24%)
Query 8 VLDAHGGLQRWRAAETVHGRVRTGGLLLRTRVPGNRFADYRITVHVQQARTVLDPFPRDG 67
VL+ HGG+ WRA +T L + F Y I +H + + V + R
Sbjct 52 VLEVHGGIAAWRAQKT----------LTFVKPNDEGFEHYTIDLHTRNEKVVSEEVERGN 101
Query 68 YRGVFESGQVRIESHDGAVISSRAHPRAAFFGRSGLRRNIRWDPLDSVYFAGYAMWNYLT 127
E V+ P F G + +N+ YF YAM
Sbjct 102 ------------EGDKTWVLD----PENNFKGDAVFYKNL--------YFYFYAM----- 132
Query 128 TPYLLTREGVAVEEGAPWQQEGETWRRLIVSFPPDIDTHSPRQTFYV 174
P++L +GV E + +G ++ + VSF + T SP+ +YV
Sbjct 133 -PFVLADKGVNYSETEALEVDGVSYPGIKVSFDQGVGT-SPKDNYYV 177
>gi|300775562|ref|ZP_07085423.1| prolyl oligopeptidase [Chryseobacterium gleum ATCC 35910]
gi|300505589|gb|EFK36726.1| prolyl oligopeptidase [Chryseobacterium gleum ATCC 35910]
Length=716
Score = 38.9 bits (89), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 25/95 (27%), Positives = 42/95 (45%), Gaps = 18/95 (18%)
Query 68 YRGVFESGQVRIESHDGAVISSRAHPRAAFFGRSGLRRNIRWDPLDSVYFAGYAMWNYLT 127
Y ++E +V ++SHDGA++ P + + +NI+ D Y GY +
Sbjct 443 YNALYEVKEVEVKSHDGAIV-----PLSIIY-----PKNIKMDGSTPAYITGYGGYGISY 492
Query 128 TPYLLTREGVAVEEGAPWQ--------QEGETWRR 154
TP TR V +E+G ++G+ W R
Sbjct 493 TPRFSTRLSVLLEQGVVLAVAHVRGGGEKGDKWHR 527
>gi|312112663|ref|YP_003990979.1| arginyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
gi|336237125|ref|YP_004589741.1| Arginyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93]
gi|311217764|gb|ADP76368.1| arginyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
gi|335363980|gb|AEH49660.1| Arginyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93]
Length=556
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 38/133 (29%), Positives = 57/133 (43%), Gaps = 10/133 (7%)
Query 41 GNRFADYRITVHVQ--QARTVLDPFPRDGYRG--VFESGQVRIESHDGAVISSRAHPRAA 96
GN+ + +V + QA + P DGY G + E G+ E H + R A
Sbjct 173 GNQIYNLAKSVEARYFQALGIDKEMPEDGYYGDDIIEIGKKLAEEHGDKYVHMDEQERLA 232
Query 97 FFGRSGLRRNIRWDPLDSVYF-AGYAMWNYLTTPYLLTR--EGVAV--EEGAPWQQEGET 151
FF GLR + D F + +W T+ Y + E +AV E G ++++G T
Sbjct 233 FFREYGLRYELEKIKKDLADFRVTFDVWYSETSLYKSGKIDEALAVLRERGHIYEKDGAT 292
Query 152 WRRLIVSFPPDID 164
W R +F D D
Sbjct 293 WFR-STTFGDDKD 304
>gi|321313283|ref|YP_004205570.1| arginyl-tRNA synthetase [Bacillus subtilis BSn5]
gi|320019557|gb|ADV94543.1| arginyl-tRNA synthetase [Bacillus subtilis BSn5]
Length=556
Score = 38.5 bits (88), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 35/133 (27%), Positives = 60/133 (46%), Gaps = 10/133 (7%)
Query 41 GNRFADYRITVHVQ--QARTVLDPFPRDGYRG--VFESGQVRIESHDGAVISSRAHPRAA 96
GN+ + ++V V+ +A + P P DGYRG + G+ E + ++ R A
Sbjct 173 GNQINNLALSVEVRYFEALGLEKPMPEDGYRGEDIIAIGKRLAEEYGDRFVNEEESERLA 232
Query 97 FFGRSGLRRNIRWDPLDSVYF-AGYAMWNYLTTPYLLTREGVAV----EEGAPWQQEGET 151
FF GL+ + D F + +W T+ Y + A+ E+G ++++G T
Sbjct 233 FFREYGLKYELDKLRKDLENFRVPFDVWYSETSLYQNGKIDTALEALREKGHVYEEDGAT 292
Query 152 WRRLIVSFPPDID 164
W R +F D D
Sbjct 293 WFR-STTFGDDKD 304
Lambda K H
0.324 0.141 0.461
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 343201993260
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40