BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1745c
Length=203
Score E
Sequences producing significant alignments: (Bits) Value
gi|15608883|ref|NP_216261.1| isopentenyl-diphosphate delta-isome... 416 1e-114
gi|121637653|ref|YP_977876.1| isopentenyl-diphosphate delta-isom... 359 2e-97
gi|31792933|ref|NP_855426.1| isopentenyl-diphosphate delta-isome... 356 1e-96
gi|134101715|ref|YP_001107376.1| isopentenyl-diphosphate delta-i... 226 2e-57
gi|296271518|ref|YP_003654150.1| isopentenyl-diphosphate delta-i... 224 7e-57
gi|256379301|ref|YP_003102961.1| isopentenyl-diphosphate delta-i... 223 1e-56
gi|271970531|ref|YP_003344727.1| Isopentenyl-diphosphate delta-i... 222 2e-56
gi|284029849|ref|YP_003379780.1| isopentenyl-diphosphate delta-i... 218 5e-55
gi|158317320|ref|YP_001509828.1| isopentenyl-diphosphate delta-i... 217 8e-55
gi|312138399|ref|YP_004005735.1| isopentenyl-diphosphate delta-i... 211 5e-53
gi|325674605|ref|ZP_08154292.1| isopentenyl-diphosphate delta-is... 210 8e-53
gi|336178074|ref|YP_004583449.1| Isopentenyl-diphosphate delta-i... 206 2e-51
gi|288918613|ref|ZP_06412962.1| isopentenyl-diphosphate delta-is... 204 6e-51
gi|257057686|ref|YP_003135518.1| isopentenyl-diphosphate delta-i... 201 7e-50
gi|10954699|ref|NP_066634.1| isopentenyl-diphosphate delta-isome... 197 7e-49
gi|256395060|ref|YP_003116624.1| isopentenyl-diphosphate delta-i... 194 5e-48
gi|190404370|ref|YP_001961001.1| rcorf26 [Agrobacterium rhizogen... 193 1e-47
gi|317126610|ref|YP_004100722.1| isopentenyl-diphosphate delta-i... 184 6e-45
gi|269125996|ref|YP_003299366.1| isopentenyl-diphosphate delta-i... 175 3e-42
gi|84497359|ref|ZP_00996181.1| isopentenyl-diphosphate delta-iso... 168 4e-40
gi|88854359|ref|ZP_01129026.1| isopentenyl-diphosphate delta-iso... 166 2e-39
gi|269794595|ref|YP_003314050.1| isopentenyl-diphosphate delta-i... 165 4e-39
gi|145222432|ref|YP_001133110.1| isopentenyl-diphosphate delta-i... 163 1e-38
gi|323359582|ref|YP_004225978.1| isopentenyldiphosphate isomeras... 163 1e-38
gi|86742865|ref|YP_483265.1| isopentenyl-diphosphate delta-isome... 162 2e-38
gi|325001608|ref|ZP_08122720.1| isopentenyl-diphosphate delta-is... 162 3e-38
gi|170782927|ref|YP_001711261.1| isopentenyl-diphosphate delta-i... 161 5e-38
gi|297563786|ref|YP_003682759.1| isopentenyl-diphosphate delta-i... 161 7e-38
gi|148274073|ref|YP_001223634.1| isopentenyl-diphosphate delta-i... 160 1e-37
gi|322835319|ref|YP_004215345.1| isopentenyl-diphosphate delta-i... 159 2e-37
gi|30913023|sp|Q8KP37.1|IDI_AGRME RecName: Full=Isopentenyl-diph... 157 6e-37
gi|319951365|ref|ZP_08025190.1| isopentenyl-diphosphate delta-is... 157 9e-37
gi|120402589|ref|YP_952418.1| isopentenyl-diphosphate delta-isom... 156 2e-36
gi|258652245|ref|YP_003201401.1| isopentenyl-diphosphate delta-i... 154 6e-36
gi|334338311|ref|YP_004543463.1| Isopentenyl-diphosphate Delta-i... 154 8e-36
gi|111225839|ref|YP_716633.1| isopentenyl-diphosphate delta-isom... 153 2e-35
gi|119960796|ref|YP_946138.1| isopentenyl-diphosphate delta-isom... 153 2e-35
gi|257067656|ref|YP_003153911.1| isopentenyl-diphosphate delta-i... 152 3e-35
gi|152967934|ref|YP_001363718.1| isopentenyl-diphosphate delta-i... 151 5e-35
gi|300780704|ref|ZP_07090558.1| isopentenyl-diphosphate delta-is... 150 7e-35
gi|227504518|ref|ZP_03934567.1| isopentenyl-diphosphate delta-is... 150 9e-35
gi|227833643|ref|YP_002835350.1| isopentenyl-diphosphate delta-i... 150 1e-34
gi|337291247|ref|YP_004630268.1| isopentenyl-diphosphate delta-i... 150 1e-34
gi|256831590|ref|YP_003160317.1| isopentenyl-diphosphate delta-i... 150 1e-34
gi|262202468|ref|YP_003273676.1| isopentenyl-diphosphate delta-i... 149 2e-34
gi|50955836|ref|YP_063124.1| isopentenyl-diphosphate delta-isome... 149 3e-34
gi|306836646|ref|ZP_07469612.1| isopentenyl-diphosphate delta-is... 148 5e-34
gi|260906388|ref|ZP_05914710.1| isopentenyl-diphosphate delta-is... 148 5e-34
gi|170765907|ref|ZP_02900718.1| isopentenyl-diphosphate delta-is... 147 6e-34
gi|311741344|ref|ZP_07715168.1| isopentenyl-diphosphate delta-is... 147 9e-34
>gi|15608883|ref|NP_216261.1| isopentenyl-diphosphate delta-isomerase [Mycobacterium tuberculosis
H37Rv]
gi|15841209|ref|NP_336246.1| isopentenyl-diphosphate delta-isomerase [Mycobacterium tuberculosis
CDC1551]
gi|148661544|ref|YP_001283067.1| isopentenyl-diphosphate delta-isomerase [Mycobacterium tuberculosis
H37Ra]
75 more sequence titles
Length=203
Score = 416 bits (1069), Expect = 1e-114, Method: Compositional matrix adjust.
Identities = 203/203 (100%), Positives = 203/203 (100%), Gaps = 0/203 (0%)
Query 1 MTRSYRPAPPIERVVLLNDRGDATGVADKATVHTGDTPLHLAFSSYVFDLHDQLLITRRA 60
MTRSYRPAPPIERVVLLNDRGDATGVADKATVHTGDTPLHLAFSSYVFDLHDQLLITRRA
Sbjct 1 MTRSYRPAPPIERVVLLNDRGDATGVADKATVHTGDTPLHLAFSSYVFDLHDQLLITRRA 60
Query 61 ATKRTWPAVWTNSCCGHPLPGESLPGAIRRRLAAELGLTPDRVDLILPGFRYRAAMADGT 120
ATKRTWPAVWTNSCCGHPLPGESLPGAIRRRLAAELGLTPDRVDLILPGFRYRAAMADGT
Sbjct 61 ATKRTWPAVWTNSCCGHPLPGESLPGAIRRRLAAELGLTPDRVDLILPGFRYRAAMADGT 120
Query 121 VENEICPVYRVQVDQQPRPNSDEVDAIRWLSWEQFVRDVTAGVIAPVSPWCRSQLGYLTK 180
VENEICPVYRVQVDQQPRPNSDEVDAIRWLSWEQFVRDVTAGVIAPVSPWCRSQLGYLTK
Sbjct 121 VENEICPVYRVQVDQQPRPNSDEVDAIRWLSWEQFVRDVTAGVIAPVSPWCRSQLGYLTK 180
Query 181 LGPCPAQWPVADDCRLPKAAHGN 203
LGPCPAQWPVADDCRLPKAAHGN
Sbjct 181 LGPCPAQWPVADDCRLPKAAHGN 203
>gi|121637653|ref|YP_977876.1| isopentenyl-diphosphate delta-isomerase [Mycobacterium bovis
BCG str. Pasteur 1173P2]
gi|224990128|ref|YP_002644815.1| isopentenyl-diphosphate delta-isomerase [Mycobacterium bovis
BCG str. Tokyo 172]
gi|166226215|sp|A1KJG2.1|IDI_MYCBP RecName: Full=Isopentenyl-diphosphate Delta-isomerase; Short=IPP
isomerase; AltName: Full=IPP:DMAPP isomerase; AltName: Full=Isopentenyl
pyrophosphate isomerase
gi|254803432|sp|C1AP18.1|IDI_MYCBT RecName: Full=Isopentenyl-diphosphate Delta-isomerase; Short=IPP
isomerase; AltName: Full=IPP:DMAPP isomerase; AltName: Full=Isopentenyl
pyrophosphate isomerase
gi|121493300|emb|CAL71771.1| Probable isopentenyl-diphosphate delta-isomerase idi [Mycobacterium
bovis BCG str. Pasteur 1173P2]
gi|224773241|dbj|BAH26047.1| isopentenyl-diphosphate delta-isomerase [Mycobacterium bovis
BCG str. Tokyo 172]
gi|341601671|emb|CCC64344.1| probable isopentenyl-diphosphate delta-isomerase idi [Mycobacterium
bovis BCG str. Moreau RDJ]
Length=176
Score = 359 bits (921), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 176/176 (100%), Positives = 176/176 (100%), Gaps = 0/176 (0%)
Query 1 MTRSYRPAPPIERVVLLNDRGDATGVADKATVHTGDTPLHLAFSSYVFDLHDQLLITRRA 60
MTRSYRPAPPIERVVLLNDRGDATGVADKATVHTGDTPLHLAFSSYVFDLHDQLLITRRA
Sbjct 1 MTRSYRPAPPIERVVLLNDRGDATGVADKATVHTGDTPLHLAFSSYVFDLHDQLLITRRA 60
Query 61 ATKRTWPAVWTNSCCGHPLPGESLPGAIRRRLAAELGLTPDRVDLILPGFRYRAAMADGT 120
ATKRTWPAVWTNSCCGHPLPGESLPGAIRRRLAAELGLTPDRVDLILPGFRYRAAMADGT
Sbjct 61 ATKRTWPAVWTNSCCGHPLPGESLPGAIRRRLAAELGLTPDRVDLILPGFRYRAAMADGT 120
Query 121 VENEICPVYRVQVDQQPRPNSDEVDAIRWLSWEQFVRDVTAGVIAPVSPWCRSQLG 176
VENEICPVYRVQVDQQPRPNSDEVDAIRWLSWEQFVRDVTAGVIAPVSPWCRSQLG
Sbjct 121 VENEICPVYRVQVDQQPRPNSDEVDAIRWLSWEQFVRDVTAGVIAPVSPWCRSQLG 176
>gi|31792933|ref|NP_855426.1| isopentenyl-diphosphate delta-isomerase [Mycobacterium bovis
AF2122/97]
gi|46395585|sp|Q7VEU0.1|IDI_MYCBO RecName: Full=Isopentenyl-diphosphate Delta-isomerase; Short=IPP
isomerase; AltName: Full=IPP:DMAPP isomerase; AltName: Full=Isopentenyl
pyrophosphate isomerase
gi|31618524|emb|CAD94476.1| Probable isopentenyl-diphosphate delta-isomerase IDI (IPP isomerase)
(Isopentenyl pyrophosphate isomerase) [Mycobacterium
bovis AF2122/97]
Length=176
Score = 356 bits (913), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 175/176 (99%), Positives = 175/176 (99%), Gaps = 0/176 (0%)
Query 1 MTRSYRPAPPIERVVLLNDRGDATGVADKATVHTGDTPLHLAFSSYVFDLHDQLLITRRA 60
MTRSYRPAPPIERVVLLNDRGDATGVADKATVHTGDTPLHLAFSSYV DLHDQLLITRRA
Sbjct 1 MTRSYRPAPPIERVVLLNDRGDATGVADKATVHTGDTPLHLAFSSYVSDLHDQLLITRRA 60
Query 61 ATKRTWPAVWTNSCCGHPLPGESLPGAIRRRLAAELGLTPDRVDLILPGFRYRAAMADGT 120
ATKRTWPAVWTNSCCGHPLPGESLPGAIRRRLAAELGLTPDRVDLILPGFRYRAAMADGT
Sbjct 61 ATKRTWPAVWTNSCCGHPLPGESLPGAIRRRLAAELGLTPDRVDLILPGFRYRAAMADGT 120
Query 121 VENEICPVYRVQVDQQPRPNSDEVDAIRWLSWEQFVRDVTAGVIAPVSPWCRSQLG 176
VENEICPVYRVQVDQQPRPNSDEVDAIRWLSWEQFVRDVTAGVIAPVSPWCRSQLG
Sbjct 121 VENEICPVYRVQVDQQPRPNSDEVDAIRWLSWEQFVRDVTAGVIAPVSPWCRSQLG 176
>gi|134101715|ref|YP_001107376.1| isopentenyl-diphosphate delta-isomerase [Saccharopolyspora erythraea
NRRL 2338]
gi|291003114|ref|ZP_06561087.1| isopentenyl-diphosphate delta-isomerase [Saccharopolyspora erythraea
NRRL 2338]
gi|172044129|sp|A4FK76.1|IDI_SACEN RecName: Full=Isopentenyl-diphosphate Delta-isomerase; Short=IPP
isomerase; AltName: Full=IPP:DMAPP isomerase; AltName: Full=Isopentenyl
pyrophosphate isomerase
gi|133914338|emb|CAM04451.1| isopentenyl-diphosphate delta-isomerase [Saccharopolyspora erythraea
NRRL 2338]
Length=194
Score = 226 bits (576), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 111/190 (59%), Positives = 130/190 (69%), Gaps = 1/190 (0%)
Query 11 IERVVLLNDRGDATGVADKATVHTGDTPLHLAFSSYVFDLHDQLLITRRAATKRTWPAVW 70
+E+VVLLND G A GV DKATVH DTPLHLAFS YVF+ QLL+T+RA KRTWP VW
Sbjct 1 MEQVVLLNDSGQAIGVTDKATVHHLDTPLHLAFSCYVFNGRGQLLLTQRAHEKRTWPGVW 60
Query 71 TNSCCGHPLPGESLPGAIRRRLAAELGLTPDRVDLILPGFRYRAAMADGTVENEICPVYR 130
TN+CCGHP P E++P AI RRL ELGLT + L+LP FRYRA M +G VENEICPV+
Sbjct 61 TNTCCGHPAPQEAMPEAITRRLGEELGLTVRDLTLVLPRFRYRAVMGNGVVENEICPVFA 120
Query 131 VQVDQQPRPNSDEVDAIRWLSWEQFVRDVTAGVIAPVSPWCRSQLGYLTKLGPCPAQWPV 190
D +P PN +EV W W F +V AG +SPWCR Q+ L +LG PA+WP
Sbjct 121 AFTDDEPAPNREEVAGTAWADWSGFSAEVLAGTT-DISPWCRQQVAELVELGANPAEWPA 179
Query 191 ADDCRLPKAA 200
AD LP AA
Sbjct 180 ADPADLPDAA 189
>gi|296271518|ref|YP_003654150.1| isopentenyl-diphosphate delta-isomerase, type 1 [Thermobispora
bispora DSM 43833]
gi|296094305|gb|ADG90257.1| isopentenyl-diphosphate delta-isomerase, type 1 [Thermobispora
bispora DSM 43833]
Length=197
Score = 224 bits (570), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 111/189 (59%), Positives = 132/189 (70%), Gaps = 1/189 (0%)
Query 12 ERVVLLNDRGDATGVADKATVHTGDTPLHLAFSSYVFDLHDQLLITRRAATKRTWPAVWT 71
E VVL++ G+A G A KA VH +TPLHLAFS YVFD H ++L++RRA K TWP VWT
Sbjct 5 ELVVLVDREGNAIGTAPKAQVHGPETPLHLAFSCYVFDEHGRVLVSRRALHKITWPGVWT 64
Query 72 NSCCGHPLPGESLPGAIRRRLAAELGLTPDRVDLILPGFRYRAAMADGTVENEICPVYRV 131
NSCCGHPLPGE + A+ RRLA ELGL +RVDL+LP F YRA M +GTVE+EICPVYR
Sbjct 65 NSCCGHPLPGEPVHAAVIRRLAFELGLQVERVDLLLPDFSYRAVMENGTVEHEICPVYRA 124
Query 132 QVDQQPRPNSDEVDAIRWLSWEQFVRDVTAGVIAPVSPWCRSQLGYLTKLGPCPAQWPVA 191
V RPN DEV ++WL W F V +G + P+SPW R Q+ L LGP P WPVA
Sbjct 125 VVSVDARPNPDEVAEVKWLPWGSFAEGVLSGAM-PISPWAREQIPLLVALGPDPLAWPVA 183
Query 192 DDCRLPKAA 200
D+ RLP A
Sbjct 184 DEDRLPPVA 192
>gi|256379301|ref|YP_003102961.1| isopentenyl-diphosphate delta-isomerase [Actinosynnema mirum
DSM 43827]
gi|255923604|gb|ACU39115.1| isopentenyl-diphosphate delta-isomerase, type 1 [Actinosynnema
mirum DSM 43827]
Length=190
Score = 223 bits (568), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 110/189 (59%), Positives = 133/189 (71%), Gaps = 1/189 (0%)
Query 11 IERVVLLNDRGDATGVADKATVHTGDTPLHLAFSSYVFDLHDQLLITRRAATKRTWPAVW 70
+ERVVLL++ G A G ADKATVH +TPLHLAFSSY+FD +LL++RRA K+TWP VW
Sbjct 1 MERVVLLDETGAAVGEADKATVHHEETPLHLAFSSYLFDRGGRLLLSRRALHKKTWPGVW 60
Query 71 TNSCCGHPLPGESLPGAIRRRLAAELGLTPDRVDLILPGFRYRAAMADGTVENEICPVYR 130
TNSCCGHP PGE L +RRRLA ELGL +DL+LPGFRYRA M +G VENE+CPVYR
Sbjct 61 TNSCCGHPAPGEDLEAGVRRRLAEELGLPDVGLDLVLPGFRYRAVMDNGVVENEMCPVYR 120
Query 131 VQVDQQPRPNSDEVDAIRWLSWEQFVRDVTAGVIAPVSPWCRSQLGYLTKLGPCPAQWPV 190
+D +P PN DEVD + W+ W F V +G P+SPWC Q+ L +LG P +WPV
Sbjct 121 GVIDTEPAPNPDEVDDVEWVPWADFAPAVLSGA-RPISPWCLLQVEALAELGDDPLKWPV 179
Query 191 ADDCRLPKA 199
LP A
Sbjct 180 GSPADLPLA 188
>gi|271970531|ref|YP_003344727.1| Isopentenyl-diphosphate delta-isomerase [Streptosporangium roseum
DSM 43021]
gi|270513706|gb|ACZ91984.1| Isopentenyl-diphosphate Delta-isomerase [Streptosporangium roseum
DSM 43021]
Length=193
Score = 222 bits (566), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 113/191 (60%), Positives = 134/191 (71%), Gaps = 1/191 (0%)
Query 10 PIERVVLLNDRGDATGVADKATVHTGDTPLHLAFSSYVFDLHDQLLITRRAATKRTWPAV 69
P E VVL++ G+A G A KA VH +TPLHLAFSSYVFD ++L+TRRA+ K TWP V
Sbjct 3 PQEHVVLVDAEGNAIGTAPKAVVHGPETPLHLAFSSYVFDGQGRVLLTRRASHKITWPGV 62
Query 70 WTNSCCGHPLPGESLPGAIRRRLAAELGLTPDRVDLILPGFRYRAAMADGTVENEICPVY 129
WTNSCCGHPLPGE + A+ RRL+ ELGL+ VDL+LP F YRA M G VE+E+CPVY
Sbjct 63 WTNSCCGHPLPGEPMAEAVTRRLSHELGLSAGGVDLLLPRFSYRAVMDSGIVEHELCPVY 122
Query 130 RVQVDQQPRPNSDEVDAIRWLSWEQFVRDVTAGVIAPVSPWCRSQLGYLTKLGPCPAQWP 189
RV V PN DEVD +RW+ W++FV V A +A VSPWCR QL L +LG P WP
Sbjct 123 RVVVGSDAAPNPDEVDDVRWMPWKEFVDGVLAHRLA-VSPWCREQLPQLVELGADPLGWP 181
Query 190 VADDCRLPKAA 200
VAD LP AA
Sbjct 182 VADPAELPAAA 192
>gi|284029849|ref|YP_003379780.1| isopentenyl-diphosphate delta-isomerase, type 1 [Kribbella flavida
DSM 17836]
gi|283809142|gb|ADB30981.1| isopentenyl-diphosphate delta-isomerase, type 1 [Kribbella flavida
DSM 17836]
Length=188
Score = 218 bits (554), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 111/189 (59%), Positives = 129/189 (69%), Gaps = 6/189 (3%)
Query 12 ERVVLLNDRGDATGVADKATVHTGDTPLHLAFSSYVFDLHDQLLITRRAATKRTWPAVWT 71
E+VVL+++ G A G DKATVH TPLHLAFSSYV D D+LL+T+RA +K TWP VWT
Sbjct 4 EKVVLVDEAGRAIGSQDKATVHHRSTPLHLAFSSYVLDRQDRLLLTQRAHSKTTWPGVWT 63
Query 72 NSCCGHPLPGESLPGAIRRRLAAELGLTPDRVDLILPGFRYRAAMADGTVENEICPVYRV 131
NSCCGHPLPGE L A+RRRL ELG+ PD V+L+LP FRYRA M G VENE+CPVYRV
Sbjct 64 NSCCGHPLPGEPLADAVRRRLGDELGVVPDDVELVLPEFRYRAEMPAGIVENELCPVYRV 123
Query 132 QVDQQPRPNSDEVDAIRWLSWEQFVRDVTAGVIAPVSPWCRSQLGYLTKLGPCPAQWPVA 191
+ P P+ EV A W+ W Q G +SPWC QL L+ LGP PA WPVA
Sbjct 124 RWSGDPSPDPAEVAAYEWVEWSQV------GARPGLSPWCELQLAALSGLGPTPADWPVA 177
Query 192 DDCRLPKAA 200
D LP AA
Sbjct 178 DPELLPPAA 186
>gi|158317320|ref|YP_001509828.1| isopentenyl-diphosphate delta-isomerase [Frankia sp. EAN1pec]
gi|158112725|gb|ABW14922.1| isopentenyl-diphosphate delta-isomerase, type 1 [Frankia sp.
EAN1pec]
Length=227
Score = 217 bits (552), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 112/192 (59%), Positives = 127/192 (67%), Gaps = 1/192 (0%)
Query 12 ERVVLLNDRGDATGVADKATVHTGDTPLHLAFSSYVFDLHDQLLITRRAATKRTWPAVWT 71
E V+LL+ GD TG KATVH TPLHLAFSSYVFD D++L+TRRA K TWP V T
Sbjct 31 ELVILLSPSGDITGTTPKATVHGPQTPLHLAFSSYVFDDMDRILVTRRALEKPTWPGVLT 90
Query 72 NSCCGHPLPGESLPGAIRRRLAAELGLTPDRVDLILPGFRYRAAMADGTVENEICPVYRV 131
N+CCGHP PGE AI RRL ELGL R+DL LP FRYR M DG VENEICPV+
Sbjct 91 NTCCGHPAPGEDFREAISRRLQEELGLQVQRIDLALPAFRYRCVMDDGMVENEICPVFFT 150
Query 132 QVDQQPRPNSDEVDAIRWLSWEQFVRDVTAGVIAPVSPWCRSQLGYLTKLGPCPAQWPVA 191
+ R N DEV WL W +FV DVT+G +A +SPWCR Q+ L KLGP P WP A
Sbjct 151 RASGPFRINPDEVAEAFWLPWSKFVDDVTSGALA-ISPWCRLQVEQLRKLGPSPRHWPSA 209
Query 192 DDCRLPKAAHGN 203
D +LP AA N
Sbjct 210 PDDQLPPAARQN 221
>gi|312138399|ref|YP_004005735.1| isopentenyl-diphosphate delta-isomerase [Rhodococcus equi 103S]
gi|311887738|emb|CBH47050.1| isopentenyl-diphosphate delta-isomerase [Rhodococcus equi 103S]
Length=197
Score = 211 bits (537), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 114/194 (59%), Positives = 130/194 (68%), Gaps = 3/194 (1%)
Query 11 IERVVLLNDRGDATGVADKATVHTGDTPLHLAFSSYVFDLHDQLLITRRAATKRTWPAVW 70
+E VVLL++ G A G KATVHT TPLHLAFSSYVFD H +LL+TRRA K TWP VW
Sbjct 1 MEHVVLLDEAGRAVGTEPKATVHTTATPLHLAFSSYVFDRHGRLLMTRRALDKATWPGVW 60
Query 71 TNSCCGHPLPGESLPGAIRRRLAAELGLTPDRVDLILPGFRYRAAMADGTVENEICPVYR 130
TN+CCGHP GE L A+RRRL ELG+ VDL+LP FRYRA M G VENEICPV+R
Sbjct 61 TNTCCGHPALGEPLREAVRRRLHHELGIDSSEVDLVLPDFRYRAVMDSGVVENEICPVFR 120
Query 131 VQVDQ-QPRPNSDEVDAIRWLSWEQFVRDVTAGVIAPVSPWCRSQLGYLTKLGPCPAQWP 189
V+ D P P EVD + W+ W F +V AG A VSPWCR Q+ L +LGP PA W
Sbjct 121 VRYDGPPPVPRRGEVDDVDWVDWSTFSAEVDAGARA-VSPWCREQVQQLRRLGPDPAAWT 179
Query 190 VADDCRLPKAA-HG 202
A LP AA HG
Sbjct 180 AAPLTALPPAARHG 193
>gi|325674605|ref|ZP_08154292.1| isopentenyl-diphosphate delta-isomerase [Rhodococcus equi ATCC
33707]
gi|325554191|gb|EGD23866.1| isopentenyl-diphosphate delta-isomerase [Rhodococcus equi ATCC
33707]
Length=197
Score = 210 bits (535), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 112/191 (59%), Positives = 128/191 (68%), Gaps = 2/191 (1%)
Query 11 IERVVLLNDRGDATGVADKATVHTGDTPLHLAFSSYVFDLHDQLLITRRAATKRTWPAVW 70
+E VVLL++ G A G KATVHT TPLHLAFSSYVFD H +LL+TRRA K TWP VW
Sbjct 1 MEHVVLLDEAGRAVGTEPKATVHTTATPLHLAFSSYVFDRHGRLLMTRRALDKATWPGVW 60
Query 71 TNSCCGHPLPGESLPGAIRRRLAAELGLTPDRVDLILPGFRYRAAMADGTVENEICPVYR 130
TN+CCGHP GE L A+RRRL ELG+ VDL+LP FRYRA M G VENEICPV+R
Sbjct 61 TNTCCGHPALGEPLREAVRRRLHHELGIDSSEVDLVLPDFRYRAVMDSGVVENEICPVFR 120
Query 131 VQVDQ-QPRPNSDEVDAIRWLSWEQFVRDVTAGVIAPVSPWCRSQLGYLTKLGPCPAQWP 189
V+ D P P EVD + W+ W F +V AG A VSPWCR Q+ L +LGP PA W
Sbjct 121 VRYDGPPPVPRRGEVDDVDWVDWSTFSAEVDAGARA-VSPWCREQVQQLRRLGPDPAAWT 179
Query 190 VADDCRLPKAA 200
A LP AA
Sbjct 180 AAPLTALPPAA 190
>gi|336178074|ref|YP_004583449.1| Isopentenyl-diphosphate delta-isomerase [Frankia symbiont of
Datisca glomerata]
gi|334859054|gb|AEH09528.1| Isopentenyl-diphosphate Delta-isomerase [Frankia symbiont of
Datisca glomerata]
Length=224
Score = 206 bits (523), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 107/188 (57%), Positives = 120/188 (64%), Gaps = 1/188 (0%)
Query 12 ERVVLLNDRGDATGVADKATVHTGDTPLHLAFSSYVFDLHDQLLITRRAATKRTWPAVWT 71
E VVLL+ G+A GV KATVH TPLHLAFS YVFD D++L+TRRA KRTWP V T
Sbjct 28 ELVVLLSPSGEAVGVTPKATVHGPRTPLHLAFSCYVFDAADRILVTRRAYAKRTWPGVLT 87
Query 72 NSCCGHPLPGESLPGAIRRRLAAELGLTPDRVDLILPGFRYRAAMADGTVENEICPVYRV 131
N+CCGHP PGE A+ RRLA EL L R+DL LP FRYR M DGTVENEICPV+
Sbjct 88 NTCCGHPAPGEDFRTAVSRRLAEELNLRVQRIDLALPTFRYRCVMTDGTVENEICPVFFT 147
Query 132 QVDQQPRPNSDEVDAIRWLSWEQFVRDVTAGVIAPVSPWCRSQLGYLTKLGPCPAQWPVA 191
QV R N +EV W W F V G + +SPWCR Q+ L LGP P WPVA
Sbjct 148 QVSGDFRINPEEVAEAYWTPWSTFSDGVLNGSLE-ISPWCRLQVARLHTLGPSPRHWPVA 206
Query 192 DDCRLPKA 199
D LP A
Sbjct 207 PDEALPPA 214
>gi|288918613|ref|ZP_06412962.1| isopentenyl-diphosphate delta-isomerase, type 1 [Frankia sp.
EUN1f]
gi|288350013|gb|EFC84241.1| isopentenyl-diphosphate delta-isomerase, type 1 [Frankia sp.
EUN1f]
Length=227
Score = 204 bits (519), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 106/192 (56%), Positives = 120/192 (63%), Gaps = 1/192 (0%)
Query 12 ERVVLLNDRGDATGVADKATVHTGDTPLHLAFSSYVFDLHDQLLITRRAATKRTWPAVWT 71
E V+LL+ GD G KATVH TPLHLAFSSYVFD D+LL+TRRA K TWP V T
Sbjct 31 ELVILLSPSGDIIGTTPKATVHGPQTPLHLAFSSYVFDDLDRLLVTRRALEKTTWPGVLT 90
Query 72 NSCCGHPLPGESLPGAIRRRLAAELGLTPDRVDLILPGFRYRAAMADGTVENEICPVYRV 131
N+CCGHP PGE AI RRL ELGL R+DL LP FRYR M DG VENEICPV+
Sbjct 91 NTCCGHPAPGEDFREAITRRLVQELGLRVGRIDLALPKFRYRCVMDDGMVENEICPVFFT 150
Query 132 QVDQQPRPNSDEVDAIRWLSWEQFVRDVTAGVIAPVSPWCRSQLGYLTKLGPCPAQWPVA 191
+ + N +EV W W FV DV +G +A +SPW R Q+ L LGP P WP A
Sbjct 151 RTSGPFQINPEEVAEAFWFPWSNFVEDVMSGALA-ISPWARLQVEQLRALGPSPRNWPSA 209
Query 192 DDCRLPKAAHGN 203
D LP AA N
Sbjct 210 PDEELPPAARQN 221
>gi|257057686|ref|YP_003135518.1| isopentenyl-diphosphate delta-isomerase [Saccharomonospora viridis
DSM 43017]
gi|256587558|gb|ACU98691.1| isopentenyl-diphosphate delta-isomerase [Saccharomonospora viridis
DSM 43017]
Length=212
Score = 201 bits (510), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 105/194 (55%), Positives = 126/194 (65%), Gaps = 3/194 (1%)
Query 9 PPIERVVLLNDRGDATGVADKATVHTGDTPLHLAFSSYVFDLHDQLLITRRAATKRTWPA 68
P +E VVL R + G A KA VH TPLHLAFS Y+FD L+T RA K T+P
Sbjct 13 PEVEYVVLCGTRHERIGYAPKAEVHHQSTPLHLAFSCYLFDADGNFLVTWRAKHKPTFPG 72
Query 69 VWTNSCCGHPLPGESLPGAIRRRLAAELGLTPDRVDLILPGFRYRAAMADGTVENEICPV 128
V TNSCCGHP PGES+P AI RRL ELG+ DR++L+LP F Y AAM DGT ENE+CPV
Sbjct 73 VRTNSCCGHPGPGESIPDAIARRLTDELGIAADRIELMLPEFTYEAAMPDGTRENEVCPV 132
Query 129 YRVQVDQ--QPRPNSDEVDAIRWLSWEQFVRDVTAGVIAPVSPWCRSQLGYLTKLGPCPA 186
YR V +P PN DEV W+ WE+F+ +V A + VSPWC Q+ L LGP P
Sbjct 133 YRATVATRPEPEPNPDEVHDTEWVPWEKFLAEVDADPTS-VSPWCALQVEQLRALGPDPL 191
Query 187 QWPVADDCRLPKAA 200
WPVA++ RLP+ A
Sbjct 192 TWPVAENQRLPEVA 205
>gi|10954699|ref|NP_066634.1| isopentenyl-diphosphate delta-isomerase [Agrobacterium rhizogenes]
gi|13878537|sp|Q9KWD1.1|IDI_AGRRH RecName: Full=Isopentenyl-diphosphate Delta-isomerase; Short=IPP
isomerase; AltName: Full=IPP:DMAPP isomerase; AltName: Full=Isopentenyl
pyrophosphate isomerase
gi|8918699|dbj|BAA97764.1| riorf53 [Agrobacterium rhizogenes]
gi|10567363|dbj|BAB16172.1| riorf53 [Agrobacterium rhizogenes]
Length=209
Score = 197 bits (501), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 97/190 (52%), Positives = 127/190 (67%), Gaps = 2/190 (1%)
Query 12 ERVVLLNDRGDATGVADKATVHTGDTPLHLAFSSYVFDLHDQLLITRRAATKRTWPAVWT 71
E V+L N+ G+ATG A K+ +H DTPLHLAFS Y+F+ ++LL+TRRA+ K TWP V +
Sbjct 10 EMVILCNELGEATGTAPKSEIHHSDTPLHLAFSVYIFNGDNKLLVTRRASDKITWPGVLS 69
Query 72 NSCCGHPLPGESLPGAIRRRLAAELGLTPDRVDLILPGFRYRAAMADGTVENEICPVYRV 131
NSCCGHP PGE L AI RR+ EL + D + L+LP F YRA+M +G ENE+CPV+
Sbjct 70 NSCCGHPQPGEPLTEAIERRVHEELRIRADDIRLVLPEFSYRASMTNGITENELCPVFAA 129
Query 132 QVDQQP-RPNSDEVDAIRWLSWEQFVRDVTAGVIAPVSPWCRSQLGYLTKLGPCPAQWPV 190
P+ +EV A W+ W+ F V A + VSPWCR+Q+ L LG P+QWPV
Sbjct 130 HCKTSGVNPDLNEVSAWEWVHWQWFFESVQAERLL-VSPWCRAQVDLLAPLGANPSQWPV 188
Query 191 ADDCRLPKAA 200
A++ RLPKAA
Sbjct 189 AEERRLPKAA 198
>gi|256395060|ref|YP_003116624.1| isopentenyl-diphosphate delta-isomerase, type 1 [Catenulispora
acidiphila DSM 44928]
gi|256361286|gb|ACU74783.1| isopentenyl-diphosphate delta-isomerase, type 1 [Catenulispora
acidiphila DSM 44928]
Length=181
Score = 194 bits (494), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 99/170 (59%), Positives = 117/170 (69%), Gaps = 3/170 (1%)
Query 11 IERVVLLNDRGDATGVADKATVHTGDTPLHLAFSSYVFDLHDQLLITRRAATKRTWPAVW 70
+E VVLL + G G A KATVHT +TPLHLAFS YVFD +QLL+TRRA +KRTWP VW
Sbjct 3 VEEVVLLAEDGTPIGTAPKATVHTENTPLHLAFSCYVFDEENQLLVTRRADSKRTWPGVW 62
Query 71 TNSCCGHPLPGESLPGAIRRRLAAELGLTPDRVDLILPGFRYRAAMADGTVENEICPVYR 130
TNS CGHP PGES+ A+RRRLA+ELGL + +LP FRYRA M +G VENE+CPV+R
Sbjct 63 TNSACGHPGPGESIEDAVRRRLASELGLDITTILPLLPEFRYRAVMPNGIVENEVCPVFR 122
Query 131 --VQVDQQPRPNSDEVDAIRWLSWEQFVRDVTAGVIAPVSPWCRSQLGYL 178
V P P+ DEV RW+ W F R V +G VSPWCR Q+ L
Sbjct 123 AVVATGITPSPDPDEVGEYRWIPWADFSRQVLSGAFE-VSPWCRLQVEQL 171
>gi|190404370|ref|YP_001961001.1| rcorf26 [Agrobacterium rhizogenes]
gi|158322166|gb|ABW33583.1| rcorf26 [Agrobacterium rhizogenes]
Length=199
Score = 193 bits (491), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 96/188 (52%), Positives = 125/188 (67%), Gaps = 2/188 (1%)
Query 14 VVLLNDRGDATGVADKATVHTGDTPLHLAFSSYVFDLHDQLLITRRAATKRTWPAVWTNS 73
V+L N+ G+ATG A K+ +H DTPLHLAFS Y+F+ ++LL+TRRA+ K TWP V +NS
Sbjct 2 VILCNELGEATGTAPKSEIHHSDTPLHLAFSVYIFNGDNKLLVTRRASDKITWPGVLSNS 61
Query 74 CCGHPLPGESLPGAIRRRLAAELGLTPDRVDLILPGFRYRAAMADGTVENEICPVYRVQV 133
CCGHP PGE L AI RR EL + D + L+LP F YRA+M +G ENE+CPV+
Sbjct 62 CCGHPQPGEPLTEAIERRGHEELRIRADDIRLVLPEFSYRASMTNGITENELCPVFAAHC 121
Query 134 DQQP-RPNSDEVDAIRWLSWEQFVRDVTAGVIAPVSPWCRSQLGYLTKLGPCPAQWPVAD 192
P+ +EV A W+ W+ F V A + VSPWCR+Q+ L LG P+QWPVA+
Sbjct 122 KTSGVNPDLNEVSAWEWVHWQWFFESVQAERLL-VSPWCRAQVDLLAPLGANPSQWPVAE 180
Query 193 DCRLPKAA 200
+ RLPKAA
Sbjct 181 ERRLPKAA 188
>gi|317126610|ref|YP_004100722.1| isopentenyl-diphosphate delta-isomerase [Intrasporangium calvum
DSM 43043]
gi|315590698|gb|ADU49995.1| isopentenyl-diphosphate delta-isomerase [Intrasporangium calvum
DSM 43043]
Length=212
Score = 184 bits (467), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 102/191 (54%), Positives = 121/191 (64%), Gaps = 2/191 (1%)
Query 12 ERVVLLNDRGDATGVADKATVHTGDTPLHLAFSSYVFDLHDQLLITRRAATKRTWPAVWT 71
E VVLL+ G A G A KA+VH DTPLHLAFS+Y+F+ QLL+T+RA K T+P+VWT
Sbjct 17 ELVVLLSLDGRAIGTAPKASVHGADTPLHLAFSAYLFNDQGQLLLTQRAHDKATFPSVWT 76
Query 72 NSCCGHPLPGESLPGAIRRRLAAELGLTPDRVDLILPGFRYRAAMADGTVENEICPVYRV 131
NS CGHP PGE L A+ RR A ELGL D + L+LP F YRA M DG VE E+CPV
Sbjct 77 NSACGHPAPGEGLAEAVHRRAATELGLRVDDLRLVLPRFSYRAEM-DGVVEWELCPVLVG 135
Query 132 QVDQQPRPNSDEVDAIRWLSWEQFVRDVTAGVIAPVSPWCRSQLGYLTKLGPCPAQWPVA 191
+VD P+ EV W+ W +FV V AG VS WCR Q+ L +LGP P WP A
Sbjct 136 RVDGVLSPDPAEVAGTDWVDWREFVVQVLAGR-RDVSAWCREQVEALERLGPGPDAWPTA 194
Query 192 DDCRLPKAAHG 202
D LP A G
Sbjct 195 DPAELPPALDG 205
>gi|269125996|ref|YP_003299366.1| isopentenyl-diphosphate delta-isomerase, type 1 [Thermomonospora
curvata DSM 43183]
gi|268310954|gb|ACY97328.1| isopentenyl-diphosphate delta-isomerase, type 1 [Thermomonospora
curvata DSM 43183]
Length=191
Score = 175 bits (444), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 99/190 (53%), Positives = 118/190 (63%), Gaps = 5/190 (2%)
Query 11 IERVVLLNDRGDATGVADKATVHTGDTPLHLAFSSYVFDLHDQLLITRRAATKRTWPAVW 70
IE +VLLN G+A G A KA H +TP HLAFS YV D ++LITRRA K T+P VW
Sbjct 3 IEEIVLLNPAGEAIGTAPKAASHHRNTPYHLAFSCYVTDGEGRVLITRRALDKATFPGVW 62
Query 71 TNSCCGHPLPGESLPGAIRRRLAAELGLTPDRVDLILPGFRYRAAMADGTVENEICPVYR 130
TN+CCGHP PGESL A+ RRL ELGLT + + L+LP F YRA DGTVE+E CPV R
Sbjct 63 TNTCCGHPAPGESLRQAVARRLETELGLTAEDLTLVLPEFDYRATAPDGTVEHERCPVVR 122
Query 131 VQ-VDQQPRPNSDEVDAIRWLSWEQFVRDVTAGVIAPVSPWCRSQLGYLTKLGPCPAQWP 189
+ ++ RPN EV RW +W + + A SPW R Q+ L LG P QWP
Sbjct 123 ARWSGRRLRPNPAEVADARWQTWAECLELAGA---PEASPWFRMQMAQLAPLG-SPEQWP 178
Query 190 VADDCRLPKA 199
AD RLP A
Sbjct 179 GADPSRLPPA 188
>gi|84497359|ref|ZP_00996181.1| isopentenyl-diphosphate delta-isomerase [Janibacter sp. HTCC2649]
gi|84382247|gb|EAP98129.1| isopentenyl-diphosphate delta-isomerase [Janibacter sp. HTCC2649]
Length=186
Score = 168 bits (425), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 92/172 (54%), Positives = 108/172 (63%), Gaps = 5/172 (2%)
Query 12 ERVVLLNDRGDATGVADKATVHTGDTPLHLAFSSYVFDLHDQLLITRRAATKRTWPAVWT 71
E VVLL D G G A KATVH +TPLHLAFS YVFD + L+TRRA TK+TWP VWT
Sbjct 7 ELVVLLGDDGRPIGTAPKATVHHSETPLHLAFSCYVFDPAGRFLLTRRALTKKTWPGVWT 66
Query 72 NSCCGHPLPGESLPGAIRRRLAAELGLTPDRVDLILPGFRYRAAMADGTVENEICPVYRV 131
NSCCGHP PGE + A++RR+ ELG + L+LP FRYRA M DGTVENE+CPVY
Sbjct 67 NSCCGHPGPGEPVEEAVQRRVRQELGTELTGIRLVLPDFRYRAIMDDGTVENELCPVYAA 126
Query 132 QVDQQPRP---NSDEVDAIRWLSWEQFVRDVTAGVIAPVSPWCRSQLGYLTK 180
PR + EV + W+ W F RDV VSPWC Q+ L +
Sbjct 127 TC-PDPRALVLDPAEVAEVEWVDWAAFRRDVLVSG-RDVSPWCGLQVAALDE 176
>gi|88854359|ref|ZP_01129026.1| isopentenyl-diphosphate delta-isomerase [marine actinobacterium
PHSC20C1]
gi|88816167|gb|EAR26022.1| isopentenyl-diphosphate delta-isomerase [marine actinobacterium
PHSC20C1]
Length=174
Score = 166 bits (420), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 85/167 (51%), Positives = 104/167 (63%), Gaps = 1/167 (0%)
Query 12 ERVVLLNDRGDATGVADKATVHTGDTPLHLAFSSYVFDLHDQLLITRRAATKRTWPAVWT 71
E+VVLL+D GD GVADKA VHT +T LHLAFS ++++ ++L+TRRA +K TWP VWT
Sbjct 6 EQVVLLSDAGDHIGVADKARVHTKETALHLAFSCHIYNAEGEVLVTRRALSKLTWPGVWT 65
Query 72 NSCCGHPLPGESLPGAIRRRLAAELGLTPDRVDLILPGFRYRAAMADGTVENEICPVYRV 131
NS CGHP PGE + AI RR ELG+ + L+LP FRYRA + G VENEICPVYR
Sbjct 66 NSFCGHPSPGEDMADAITRRAKYELGIAISELQLVLPDFRYRAVDSSGIVENEICPVYRA 125
Query 132 QVDQQPRPNSDEVDAIRWLSWEQFVRDVTAGVIAPVSPWCRSQLGYL 178
+ PN DEV W+ Q + A SPW QL L
Sbjct 126 VTADEIAPNPDEVAEFDWVD-PQSLHSAVAATPFAFSPWLGWQLEQL 171
>gi|269794595|ref|YP_003314050.1| isopentenyl-diphosphate delta-isomerase [Sanguibacter keddieii
DSM 10542]
gi|269096780|gb|ACZ21216.1| isopentenyl-diphosphate delta-isomerase [Sanguibacter keddieii
DSM 10542]
Length=196
Score = 165 bits (417), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 87/170 (52%), Positives = 106/170 (63%), Gaps = 1/170 (0%)
Query 12 ERVVLLNDRGDATGVADKATVHTGDTPLHLAFSSYVFDLHDQLLITRRAATKRTWPAVWT 71
+ V+LL + G G +ATVH DTPLHLAFS Y+ Q+L+TRRA KRTWP VWT
Sbjct 21 DHVILLAEDGTRIGHTPRATVHGLDTPLHLAFSCYLLRADGQVLLTRRALAKRTWPGVWT 80
Query 72 NSCCGHPLPGESLPGAIRRRLAAELGLTPDRVDLILPGFRYRAAMADGTVENEICPVYRV 131
NS CGHP GE + A+RR A ELGL D ++L+LP FRYRA A G VENEICPV+
Sbjct 81 NSFCGHPRFGEEMSDAVRRHAAHELGLEVDGIELVLPDFRYRAVDASGVVENEICPVFFA 140
Query 132 QVDQQPRPNSDEVDAIRWLSWEQFVRDVTAGVIAPVSPWCRSQLGYLTKL 181
Q P+PN DEV + W S + +TA A SPW SQL L ++
Sbjct 141 TTTQDPQPNPDEVMDLAWTSMQDLGTAITATPWA-FSPWMVSQLNQLGEI 189
>gi|145222432|ref|YP_001133110.1| isopentenyl-diphosphate delta-isomerase [Mycobacterium gilvum
PYR-GCK]
gi|315442879|ref|YP_004075758.1| isopentenyl-diphosphate delta-isomerase [Mycobacterium sp. Spyr1]
gi|145214918|gb|ABP44322.1| isopentenyl-diphosphate delta-isomerase [Mycobacterium gilvum
PYR-GCK]
gi|315261182|gb|ADT97923.1| isopentenyl-diphosphate delta-isomerase [Mycobacterium sp. Spyr1]
Length=181
Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 85/171 (50%), Positives = 105/171 (62%), Gaps = 2/171 (1%)
Query 12 ERVVLLNDRGDATGVADKATVHTGDTPLHLAFSSYVFDLHDQLLITRRAATKRTWPAVWT 71
E+VVLL+ G + G A K+TVH GDTPLHL FS Y+FD ++L+TRRA K+TWP VWT
Sbjct 4 EQVVLLDPDGSSVGTAAKSTVHHGDTPLHLGFSCYLFDSSGRVLLTRRALGKKTWPGVWT 63
Query 72 NSCCGHPLPGESLPGAIRRRLAAELGLTPDRVDLILPGFRYRAAMADGTVENEICPVYRV 131
NS CGHP PGE + A+ RR ELG V +LP FRY A ADGTVENEICPV+
Sbjct 64 NSFCGHPAPGEDVTDAVHRRAGRELGAALADVVCVLPDFRYWARAADGTVENEICPVFCA 123
Query 132 QVDQQPRPNSDEVDAIRWLSWEQFVRDVTAGVIAPVSPWCRSQLGYLTKLG 182
+D P DEV + W+ W A + +SPW +SQ+ L G
Sbjct 124 LIDGTVSPAPDEVMDLEWVEWSDLRS--AAALRWAISPWAQSQVPLLEAAG 172
>gi|323359582|ref|YP_004225978.1| isopentenyldiphosphate isomerase [Microbacterium testaceum StLB037]
gi|323275953|dbj|BAJ76098.1| isopentenyldiphosphate isomerase [Microbacterium testaceum StLB037]
Length=183
Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 88/175 (51%), Positives = 105/175 (60%), Gaps = 1/175 (0%)
Query 12 ERVVLLNDRGDATGVADKATVHTGDTPLHLAFSSYVFDLHDQLLITRRAATKRTWPAVWT 71
E VVLL++RG G+A KA+VH DT LHLAFS +V + Q+L+TRRA K+TWP VWT
Sbjct 5 ENVVLLDERGKEIGIAPKASVHGADTALHLAFSCHVMNADGQVLVTRRALDKKTWPGVWT 64
Query 72 NSCCGHPLPGESLPGAIRRRLAAELGLTPDRVDLILPGFRYRAAMADGTVENEICPVYRV 131
NS CGHP P E+L A+ RR E+GL ++L LP FRYRA A G VENEICPVY
Sbjct 65 NSFCGHPAPAETLTDAVHRRAGFEVGLRVRDLELALPHFRYRAVDASGIVENEICPVYLA 124
Query 132 QVDQQPRPNSDEVDAIRWLSWEQFVRDVTAGVIAPVSPWCRSQLGYLTKLGPCPA 186
D +PRPN EV RW+ + A A SPW Q L G PA
Sbjct 125 YTDDEPRPNPSEVAEHRWVDPLDLAASLEATPWA-FSPWLVLQAQQLHLFGTPPA 178
>gi|86742865|ref|YP_483265.1| isopentenyl-diphosphate delta-isomerase [Frankia sp. CcI3]
gi|86569727|gb|ABD13536.1| isopentenyl-diphosphate delta-isomerase [Frankia sp. CcI3]
Length=219
Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 86/179 (49%), Positives = 106/179 (60%), Gaps = 1/179 (0%)
Query 1 MTRSYRPAPPIERVVLLNDRGDATGVADKATVHTGDTPLHLAFSSYVFDLHDQLLITRRA 60
++R PP + VVLL+ G A + VH DTPLHLAFSSY+FD +LL+TRRA
Sbjct 23 VSRDTASVPPADEVVLLDAERRPCGTAPRIAVHGLDTPLHLAFSSYLFDPSGRLLVTRRA 82
Query 61 ATKRTWPAVWTNSCCGHPLPGESLPGAIRRRLAAELGLTPDRVDLILPGFRYRAAMADGT 120
KRTWP VWTNSCCGHP PGE L A+ RR+ EL L + LP F YRA ADG
Sbjct 83 LDKRTWPGVWTNSCCGHPRPGEDLARAVERRVGQELRLELTDLHCALPDFAYRATAADGL 142
Query 121 VENEICPVYRVQVDQQPRPNSDEVDAIRWLSWEQFVRDVTAGVIAPVSPWCRSQLGYLT 179
VENE+CPVY + P P+ EV RW+ W+ + R V A +SPW Q+ +
Sbjct 143 VENEVCPVYVARALGDPDPDPAEVVEWRWVEWDDY-RRVAAAAPWALSPWSVDQMAAFS 200
>gi|325001608|ref|ZP_08122720.1| isopentenyl-diphosphate delta-isomerase, type 1 [Pseudonocardia
sp. P1]
Length=176
Score = 162 bits (410), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 83/164 (51%), Positives = 108/164 (66%), Gaps = 2/164 (1%)
Query 11 IERVVLLNDRGDATGVADKATVHTGDTPLHLAFSSYVFDLHDQLLITRRAATKRTWPAVW 70
+E+VVLL+D G GVADKATVH TP HLAFS Y D +LL+TRR+ +K +P VW
Sbjct 1 MEQVVLLDDDGAPVGVADKATVHGATTPRHLAFSCYGVDDAGRLLVTRRSRSKTAFPLVW 60
Query 71 TNSCCGHPLPGESLPGAIRRRLAAELGLTPDRVDLILPGFRYRAAMADGTVENEICPVYR 130
TN+CCGHP PGE + A+ RRL+ ELG+ + L+LP F YRA+ DG ENE+CPV+
Sbjct 61 TNTCCGHPAPGEDMADAVHRRLSDELGIRATELRLVLPDFSYRASQ-DGIEENELCPVFV 119
Query 131 VQVDQQPRPNSDEVDAIRWLSWEQFVRDVTAGVIAPVSPWCRSQ 174
++ +P P DEV+ RW SWE+F R + +SPW R Q
Sbjct 120 ARITGEPDPRPDEVEETRWWSWERF-RAAADDPDSGLSPWARLQ 162
>gi|170782927|ref|YP_001711261.1| isopentenyl-diphosphate delta-isomerase [Clavibacter michiganensis
subsp. sepedonicus]
gi|189044248|sp|B0RIB7.1|IDI_CLAMS RecName: Full=Isopentenyl-diphosphate Delta-isomerase; Short=IPP
isomerase; AltName: Full=IPP:DMAPP isomerase; AltName: Full=Isopentenyl
pyrophosphate isomerase
gi|169157497|emb|CAQ02688.1| isopentenyl-diphosphate delta-isomerase [Clavibacter michiganensis
subsp. sepedonicus]
Length=190
Score = 161 bits (408), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 88/167 (53%), Positives = 104/167 (63%), Gaps = 1/167 (0%)
Query 12 ERVVLLNDRGDATGVADKATVHTGDTPLHLAFSSYVFDLHDQLLITRRAATKRTWPAVWT 71
E VVLL+D G+ G A KATVHT DT LHLAFS +VFD ++L+TRRA K TWP VWT
Sbjct 6 ELVVLLDDDGETIGTAPKATVHTRDTALHLAFSCHVFDAEGRILVTRRAIGKLTWPGVWT 65
Query 72 NSCCGHPLPGESLPGAIRRRLAAELGLTPDRVDLILPGFRYRAAMADGTVENEICPVYRV 131
NS CGHP P E + A+ RR ELGLT + V+L+LP FRYRA A G VENEICPV+R
Sbjct 66 NSFCGHPAPDEDMLEAVHRRAEQELGLTLESVELVLPDFRYRATDAAGVVENEICPVFRA 125
Query 132 QVDQQPRPNSDEVDAIRWLSWEQFVRDVTAGVIAPVSPWCRSQLGYL 178
P +EV +W+ EQ + V A SPW QL L
Sbjct 126 VAATPVDPRPEEVGEYQWVDPEQLIPAVAHTPWA-FSPWLTLQLPLL 171
>gi|297563786|ref|YP_003682759.1| isopentenyl-diphosphate delta-isomerase, type 1 [Nocardiopsis
dassonvillei subsp. dassonvillei DSM 43111]
gi|296848235|gb|ADH70253.1| isopentenyl-diphosphate delta-isomerase, type 1 [Nocardiopsis
dassonvillei subsp. dassonvillei DSM 43111]
Length=185
Score = 161 bits (407), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 86/168 (52%), Positives = 102/168 (61%), Gaps = 1/168 (0%)
Query 14 VVLLNDRGDATGVADKATVHTGDTPLHLAFSSYVFDLHDQLLITRRAATKRTWPAVWTNS 73
VVLL++ GVADKATVHT +TPLHLAFS YV D ++LITRRA K TWP VWTNS
Sbjct 19 VVLLDEEHQRVGVADKATVHTRETPLHLAFSCYVLDADGRVLITRRALGKTTWPGVWTNS 78
Query 74 CCGHPLPGESLPGAIRRRLAAELGLTPDRVDLILPGFRYRAAMADGTVENEICPVYRVQV 133
CCGHP P E L A+RRR+ ELG+ V LP FRYRA A+G VENE CPV+ +
Sbjct 79 CCGHPGPDEDLDAAVRRRVGQELGMRVSGVRPALPDFRYRAVSAEGIVENEFCPVFWARA 138
Query 134 DQQPRPNSDEVDAIRWLSWEQFVRDVTAGVIAPVSPWCRSQLGYLTKL 181
++ P P+ EV W W V V +SPW Q+ L L
Sbjct 139 EEGPDPDPSEVAEYAWTEWADLVA-VAERTPWLLSPWAVEQIPRLDAL 185
>gi|148274073|ref|YP_001223634.1| isopentenyl-diphosphate delta-isomerase [Clavibacter michiganensis
subsp. michiganensis NCPPB 382]
gi|172047233|sp|A5CV36.1|IDI_CLAM3 RecName: Full=Isopentenyl-diphosphate Delta-isomerase; Short=IPP
isomerase; AltName: Full=IPP:DMAPP isomerase; AltName: Full=Isopentenyl
pyrophosphate isomerase
gi|147832003|emb|CAN02975.1| putative isopentenyl-diphosphate delta-isomerase [Clavibacter
michiganensis subsp. michiganensis NCPPB 382]
Length=194
Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 87/167 (53%), Positives = 103/167 (62%), Gaps = 1/167 (0%)
Query 12 ERVVLLNDRGDATGVADKATVHTGDTPLHLAFSSYVFDLHDQLLITRRAATKRTWPAVWT 71
E VVLL+D G+ G A KATVHT DT LHLAFS +VFD ++L+TRRA K TWP VWT
Sbjct 6 ELVVLLDDDGETIGTAPKATVHTRDTALHLAFSCHVFDAQGRILVTRRAIGKLTWPGVWT 65
Query 72 NSCCGHPLPGESLPGAIRRRLAAELGLTPDRVDLILPGFRYRAAMADGTVENEICPVYRV 131
NS CGHP P E + A+ RR ELGL + V+L+LP FRYRA A G VENEICPV+R
Sbjct 66 NSFCGHPAPDEDMREAVHRRAEQELGLELESVELVLPDFRYRATDAAGVVENEICPVFRA 125
Query 132 QVDQQPRPNSDEVDAIRWLSWEQFVRDVTAGVIAPVSPWCRSQLGYL 178
P +EV +W+ EQ + V A SPW QL L
Sbjct 126 VAASPVDPRPEEVGEYQWVDPEQLIPAVAHTPWA-FSPWLTLQLPLL 171
>gi|322835319|ref|YP_004215345.1| isopentenyl-diphosphate delta-isomerase, type 1 [Rahnella sp.
Y9602]
gi|321170520|gb|ADW76218.1| isopentenyl-diphosphate delta-isomerase, type 1 [Rahnella sp.
Y9602]
Length=177
Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 82/170 (49%), Positives = 106/170 (63%), Gaps = 1/170 (0%)
Query 11 IERVVLLNDRGDATGVADKATVHTGDTPLHLAFSSYVFDLHDQLLITRRAATKRTWPAVW 70
IE VVLL+ + G DKA VHTG TPLHLAFS Y+ + ++L+TRRA +K WP VW
Sbjct 2 IEEVVLLDGKNQPAGTMDKALVHTGQTPLHLAFSCYIHNDRGEILLTRRALSKVAWPGVW 61
Query 71 TNSCCGHPLPGESLPGAIRRRLAAELGLTPDRVDLILPGFRYRAAMADGTVENEICPVYR 130
TNS CGHPLPGESL A+ RR ELGL+ +++ ++ F+YRA A G VENE CP++
Sbjct 62 TNSVCGHPLPGESLRAAVCRRCQYELGLSVEQITSLVDEFQYRATDASGIVENEFCPIFA 121
Query 131 VQVDQQPRPNSDEVDAIRWLSWEQFVRDVTAGVIAPVSPWCRSQLGYLTK 180
Q P P + EV +W+ E + V A A SPW QLG +T+
Sbjct 122 AFTRQLPVPRASEVMDYQWVKPEDLLNSVRATPWA-FSPWMVLQLGQITQ 170
>gi|30913023|sp|Q8KP37.1|IDI_AGRME RecName: Full=Isopentenyl-diphosphate Delta-isomerase; Short=IPP
isomerase; AltName: Full=IPP:DMAPP isomerase; AltName: Full=Isopentenyl
pyrophosphate isomerase
gi|22296797|gb|AAM94361.1| Isopentenyl pyrophosphate Isomerase [Agromyces mediolanus]
Length=206
Score = 157 bits (398), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 88/177 (50%), Positives = 106/177 (60%), Gaps = 1/177 (0%)
Query 6 RPAPPIERVVLLNDRGDATGVADKATVHTGDTPLHLAFSSYVFDLHDQLLITRRAATKRT 65
+PA E VVLL++ G+ G A K++VH DT LHLAFS +VFD +LL+TRRA K
Sbjct 17 QPASSAELVVLLDEAGNQIGTAPKSSVHGADTALHLAFSCHVFDDDGRLLVTRRALGKVA 76
Query 66 WPAVWTNSCCGHPLPGESLPGAIRRRLAAELGLTPDRVDLILPGFRYRAAMADGTVENEI 125
WP VWTNS CGHP P E LP A+RRR ELGL V+ +LP FRYRA A G VE+EI
Sbjct 77 WPGVWTNSFCGHPAPAEPLPHAVRRRAEFELGLELRDVEPVLPFFRYRATDASGIVEHEI 136
Query 126 CPVYRVQVDQQPRPNSDEVDAIRWLSWEQFVRDVTAGVIAPVSPWCRSQLGYLTKLG 182
CPVY + P P+ DEV + W+ + V A A SPW Q L LG
Sbjct 137 CPVYTARTSSVPAPHPDEVLDLAWVEPGELATAVRAAPWA-FSPWLVLQAQLLPFLG 192
>gi|319951365|ref|ZP_08025190.1| isopentenyl-diphosphate delta-isomerase [Dietzia cinnamea P4]
gi|319434962|gb|EFV90257.1| isopentenyl-diphosphate delta-isomerase [Dietzia cinnamea P4]
Length=187
Score = 157 bits (397), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 85/169 (51%), Positives = 105/169 (63%), Gaps = 1/169 (0%)
Query 10 PIERVVLLNDRGDATGVADKATVHTGDTPLHLAFSSYVFDLHDQLLITRRAATKRTWPAV 69
P+E VVLL++ G TG ADKATVHT DTPLHLAFS ++ D ++L+TRRA KRTWP +
Sbjct 15 PVELVVLLDEDGTPTGTADKATVHTADTPLHLAFSCHIVDDEGRVLLTRRALGKRTWPGI 74
Query 70 WTNSCCGHPLPGESLPGAIRRRLAAELGLTPDRVDLILPGFRYRAAMADGTVENEICPVY 129
WTNS CGHP PGE AI RR ELG D ++ +P FRYRA G VENEICPV+
Sbjct 75 WTNSFCGHPGPGEDPVEAIVRRAEQELGTRVDSIEPAVPDFRYRAVDDSGIVENEICPVF 134
Query 130 RVQVDQQPRPNSDEVDAIRWLSWEQFVRDVTAGVIAPVSPWCRSQLGYL 178
++ P +DEV A W E V A A SPW +Q+ ++
Sbjct 135 TARIRADLNPRADEVCAHHWARPEDVRTAVDATPFA-FSPWLVAQVPHM 182
>gi|120402589|ref|YP_952418.1| isopentenyl-diphosphate delta-isomerase [Mycobacterium vanbaalenii
PYR-1]
gi|171769209|sp|A1T5G2.1|IDI_MYCVP RecName: Full=Isopentenyl-diphosphate Delta-isomerase; Short=IPP
isomerase; AltName: Full=IPP:DMAPP isomerase; AltName: Full=Isopentenyl
pyrophosphate isomerase
gi|119955407|gb|ABM12412.1| isopentenyl-diphosphate delta-isomerase [Mycobacterium vanbaalenii
PYR-1]
Length=181
Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/171 (48%), Positives = 104/171 (61%), Gaps = 2/171 (1%)
Query 12 ERVVLLNDRGDATGVADKATVHTGDTPLHLAFSSYVFDLHDQLLITRRAATKRTWPAVWT 71
E VVLL+D G G A KA VH TPLHLAFS Y+FD ++L+TRRA KRT+P +WT
Sbjct 8 ELVVLLDDDGRTIGSAPKAQVHHASTPLHLAFSCYLFDDAGRVLLTRRAVHKRTFPGIWT 67
Query 72 NSCCGHPLPGESLPGAIRRRLAAELGLTPDRVDLILPGFRYRAAMADGTVENEICPVYRV 131
N+CCGHP PGE+L A+ RR+ ELG+ + +LP FRYRA ADG VENE+CPV+
Sbjct 68 NTCCGHPAPGEALQDAVTRRVREELGVGITDLRCVLPDFRYRAVAADGVVENEVCPVFCG 127
Query 132 QVDQQPRPNSDEVDAIRWLSWEQFVRDVTAGVIAPVSPWCRSQLGYLTKLG 182
+ Q P+ DEV W+ W+ G +SPW Q+ L G
Sbjct 128 RAVGQVHPDRDEVADHVWVPWQHMRAAAEFG--WAISPWAAEQVPLLDAAG 176
>gi|258652245|ref|YP_003201401.1| isopentenyl-diphosphate delta-isomerase, type 1 [Nakamurella
multipartita DSM 44233]
gi|258555470|gb|ACV78412.1| isopentenyl-diphosphate delta-isomerase, type 1 [Nakamurella
multipartita DSM 44233]
Length=210
Score = 154 bits (390), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 89/179 (50%), Positives = 111/179 (63%), Gaps = 10/179 (5%)
Query 3 RSYRPAPPI------ERVVLLNDRGDATGVADKATVHTGDTPLHLAFSSYVFDLHDQLLI 56
R +RP P+ E+VVL+++ G A G ADKATVH TP HLAFS Y F +LL+
Sbjct 16 RLHRPPFPLSPLDENEQVVLVDEAGTAIGTADKATVHGAHTPRHLAFSCYGFRADGRLLV 75
Query 57 TRRAATKRTWPAVWTNSCCGHPLPGESLPGAIRRRLAAELGLTPDRVDLILPGFRYRAAM 116
TRRA K T+P+VWTN+ CGHP PGES A RRL ELG+ P + + LP F YRA
Sbjct 76 TRRAHDKATFPSVWTNTACGHPAPGESPAQAATRRLRYELGVQPRELTMALPDFSYRA-- 133
Query 117 ADGTV-ENEICPVYRVQVDQQPRPNSDEVDAIRWLSWEQFVRDVTAGVIAPVSPWCRSQ 174
DGTV ENE+CPV ++D P+P +DEV W SW QF+ A + +SPW R Q
Sbjct 134 FDGTVEENELCPVLVCRIDDDPQPRADEVGEWAWWSWAQFLA-AAADPESGLSPWSREQ 191
>gi|334338311|ref|YP_004543463.1| Isopentenyl-diphosphate Delta-isomerase [Isoptericola variabilis
225]
gi|334108679|gb|AEG45569.1| Isopentenyl-diphosphate Delta-isomerase [Isoptericola variabilis
225]
Length=182
Score = 154 bits (389), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 85/167 (51%), Positives = 102/167 (62%), Gaps = 1/167 (0%)
Query 10 PIERVVLLNDRGDATGVADKATVHTGDTPLHLAFSSYVFDLHDQLLITRRAATKRTWPAV 69
P + VVLL D G G A +ATVH DTPLHLAFS Y+ D ++L+TRRA KR WP V
Sbjct 4 PPDEVVLLADDGTPVGTAPRATVHHEDTPLHLAFSCYLLDDDGRVLLTRRALVKRAWPGV 63
Query 70 WTNSCCGHPLPGESLPGAIRRRLAAELGLTPDRVDLILPGFRYRAAMADGTVENEICPVY 129
WTN+ CGHP PGE+ AI R ELG T + +LP FRYRA A G VENE+CPVY
Sbjct 64 WTNAFCGHPRPGETFEDAIHRYARHELGTTVTGLRPLLPDFRYRAVDASGVVENEVCPVY 123
Query 130 RVQVDQQPRPNSDEVDAIRWLSWEQFVRDVTAGVIAPVSPWCRSQLG 176
+V PN DEV RW+ ++ V D A V +SPW Q+G
Sbjct 124 VARVGGPLEPNPDEVMDHRWVGADEMV-DAVARVPWALSPWMVLQVG 169
>gi|111225839|ref|YP_716633.1| isopentenyl-diphosphate delta-isomerase [Frankia alni ACN14a]
gi|123142532|sp|Q0RBQ7.1|IDI_FRAAA RecName: Full=Isopentenyl-diphosphate Delta-isomerase; Short=IPP
isomerase; AltName: Full=IPP:DMAPP isomerase; AltName: Full=Isopentenyl
pyrophosphate isomerase
gi|111153371|emb|CAJ65127.1| isopentenyl diphosphate isomerase [Frankia alni ACN14a]
Length=194
Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/164 (50%), Positives = 100/164 (61%), Gaps = 1/164 (0%)
Query 12 ERVVLLNDRGDATGVADKATVHTGDTPLHLAFSSYVFDLHDQLLITRRAATKRTWPAVWT 71
+ VVLL+ G A + VH DTPLHLAFSSY+FD +LL+TRRA KRTWP VWT
Sbjct 14 DEVVLLDPDRRPCGTAPRLAVHGLDTPLHLAFSSYLFDAAGRLLVTRRALGKRTWPGVWT 73
Query 72 NSCCGHPLPGESLPGAIRRRLAAELGLTPDRVDLILPGFRYRAAMADGTVENEICPVYRV 131
NSCCGHP PGE + A+ RR+ EL L + LP F YRA ADG VENE+CPVY
Sbjct 74 NSCCGHPRPGEDIALAVERRVDQELRLALTDLHCALPDFAYRATAADGLVENEVCPVYVA 133
Query 132 QVDQQPRPNSDEVDAIRWLSWEQFVRDVTAGVIAPVSPWCRSQL 175
+ P P+ EV RW+ WE + + A A +SPW Q+
Sbjct 134 RAVGDPDPDPAEVVEWRWVDWESYRQAALAAPWA-LSPWSVDQM 176
>gi|119960796|ref|YP_946138.1| isopentenyl-diphosphate delta-isomerase [Arthrobacter aurescens
TC1]
gi|189044247|sp|A1R1M6.1|IDI_ARTAT RecName: Full=Isopentenyl-diphosphate Delta-isomerase; Short=IPP
isomerase; AltName: Full=IPP:DMAPP isomerase; AltName: Full=Isopentenyl
pyrophosphate isomerase
gi|119947655|gb|ABM06566.1| isopentenyl-diphosphate delta-isomerase, type 1 [Arthrobacter
aurescens TC1]
Length=184
Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/176 (47%), Positives = 103/176 (59%), Gaps = 1/176 (0%)
Query 12 ERVVLLNDRGDATGVADKATVHTGDTPLHLAFSSYVFDLHDQLLITRRAATKRTWPAVWT 71
E VVLL+D G G A KA VHT DTPLHLAFS Y+ + ++L+TRR+ K+TWP VWT
Sbjct 5 EMVVLLDDAGTPIGEAPKAGVHTLDTPLHLAFSCYLINDVGEVLLTRRSPEKKTWPGVWT 64
Query 72 NSCCGHPLPGESLPGAIRRRLAAELGLTPDRVDLILPGFRYRAAMADGTVENEICPVYRV 131
NS CGHP PGE AI RR ELG+ ++++L+LP FRYRA G VENE+CPVY
Sbjct 65 NSFCGHPGPGEEFEDAILRRAQFELGVDANKIELVLPHFRYRAIDPTGIVENEVCPVYVA 124
Query 132 QVDQQPRPNSDEVDAIRWLSWEQFVRDVTAGVIAPVSPWCRSQLGYLTKLGPCPAQ 187
++ PN EV W+S + D + SPW Q L + P Q
Sbjct 125 RITGVLNPNPAEVADWAWIS-PALLADALEHTPSAFSPWLGLQFPQLLEANALPLQ 179
>gi|257067656|ref|YP_003153911.1| isopentenyl-diphosphate delta-isomerase [Brachybacterium faecium
DSM 4810]
gi|256558474|gb|ACU84321.1| isopentenyl-diphosphate delta-isomerase [Brachybacterium faecium
DSM 4810]
Length=200
Score = 152 bits (383), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 84/166 (51%), Positives = 104/166 (63%), Gaps = 5/166 (3%)
Query 12 ERVVLLNDRGDATGVADKATVHTGDTPLHLAFSSYVFDLHDQLLITRRAATKRTWPAVWT 71
+ VVLL + G G+A +ATVH+ TPLHLAFS ++ Q+L+TRRA KRTWP VWT
Sbjct 12 DHVVLLCEDGSPCGLAPRATVHSATTPLHLAFSCHLRRPDGQVLLTRRALGKRTWPGVWT 71
Query 72 NSCCGHPLPGESLPGAIRRRLAAELGLTPDRVDLILPGFRYRAAMADGTVENEICPVYRV 131
NS CGHP GES P AI R ELGL V +LP FRYRA A G VENE+CPV+
Sbjct 72 NSFCGHPRQGESFPEAIARHARHELGLEIRDVRSVLPDFRYRAVDASGIVENEVCPVFIA 131
Query 132 QVDQQPRPNSDEVDAIRWLSWEQFVRDVTAGVIAP--VSPWCRSQL 175
D P PN +EV +RW++ E+F V +AP +SPW Q+
Sbjct 132 TTDGAPAPNPEEVMDLRWVAPEEFTALVD---LAPWTLSPWAVEQV 174
>gi|152967934|ref|YP_001363718.1| isopentenyl-diphosphate delta-isomerase [Kineococcus radiotolerans
SRS30216]
gi|151362451|gb|ABS05454.1| isopentenyl-diphosphate delta-isomerase, type 1 [Kineococcus
radiotolerans SRS30216]
Length=186
Score = 151 bits (382), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 83/169 (50%), Positives = 103/169 (61%), Gaps = 4/169 (2%)
Query 9 PPIERVVLLNDRGDATGVADKATVHTGDTPLHLAFSSYVFDLHDQLLITRRAATKRTWPA 68
P E VVLL + G G A K+ VH TPLHLAFS ++ D + L+TRRAA+KRTWP
Sbjct 13 PATELVVLLTEDGTPCGTAPKSGVHHRTTPLHLAFSCWILDDAGRTLLTRRAASKRTWPG 72
Query 69 VWTNSCCGHPLPGESLPGAIRRRLAAELGLTPDRVDLILPGFRYRAAMADGTVENEICPV 128
VWTNS CGHP PGE A+ RR ELG+ V +LP FRYRA M DGTVENE+CPV
Sbjct 73 VWTNSFCGHPGPGEEPADAVLRRSVQELGVQVGDVSPLLPSFRYRAVMDDGTVENEVCPV 132
Query 129 YRVQV---DQQPRPNSDEVDAIRWLSWEQFVRDVTAGVIAPVSPWCRSQ 174
+ ++ + + P+ EVDA RW+ + V A +P SPW Q
Sbjct 133 FTARIAPGEGELAPDPAEVDAFRWVHLDDLAAQVAADP-SPFSPWMLWQ 180
>gi|300780704|ref|ZP_07090558.1| isopentenyl-diphosphate delta-isomerase [Corynebacterium genitalium
ATCC 33030]
gi|300532411|gb|EFK53472.1| isopentenyl-diphosphate delta-isomerase [Corynebacterium genitalium
ATCC 33030]
Length=181
Score = 150 bits (380), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 85/171 (50%), Positives = 109/171 (64%), Gaps = 6/171 (3%)
Query 11 IERVVLLNDRGDATGVADKATVHTGDTPLHLAFSSYVFDLHDQLLITRRAATKRTWPAVW 70
+E+VVL +D G TG ADK VHT DTPLHLAFS+++FD LLI+RRA K+TWP VW
Sbjct 1 MEQVVLCDDDGRPTGTADKFEVHTTDTPLHLAFSAWLFDASGHLLISRRALGKKTWPGVW 60
Query 71 TNSCCGHPLPGESLPGAIRRRLAAELGLTPDRV-DL--ILPGFRYRAAMADGTVENEICP 127
TNS CGHP PGE+ A+ RR ELGL + DL +LP FRYRA + G VE+EICP
Sbjct 61 TNSFCGHPAPGEATEDAVVRRAQQELGLPASALADLRCVLPDFRYRAVDSSGIVEHEICP 120
Query 128 VYRVQV--DQQPRPNSDEVDAIRWLSWEQFVRDVTAGVIAPVSPWCRSQLG 176
VY V++ + PN DEVD+ + ++ + A + A SPW +L
Sbjct 121 VYVVRLAGGAEAAPNPDEVDSTKGVNPADLITAAEA-MPAVFSPWLVEELA 170
>gi|227504518|ref|ZP_03934567.1| isopentenyl-diphosphate delta-isomerase [Corynebacterium striatum
ATCC 6940]
gi|227198895|gb|EEI78943.1| isopentenyl-diphosphate delta-isomerase [Corynebacterium striatum
ATCC 6940]
Length=176
Score = 150 bits (380), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 80/167 (48%), Positives = 102/167 (62%), Gaps = 4/167 (2%)
Query 12 ERVVLLNDRGDATGVADKATVHTGDTPLHLAFSSYVFDLHDQLLITRRAATKRTWPAVWT 71
E VVL G G ADKA VHT DTPLH AFS++V ++L+TRRA +K+TWP VWT
Sbjct 3 ELVVLAGSDGLPAGTADKAAVHTTDTPLHFAFSAWVLR-EGKVLVTRRALSKKTWPGVWT 61
Query 72 NSCCGHPLPGESLPGAIRRRLAAELGLTPDRVDLILPGFRYRAAMADGTVENEICPVYRV 131
N+ CGHP PGE A+ RR ELGL V +LP F YRA + G VE+EICPV+ V
Sbjct 62 NAFCGHPAPGEENAAAVIRRAHFELGLAISEVREVLPDFSYRAVDSSGIVEHEICPVFLV 121
Query 132 QVD--QQPRPNSDEVDAIRWLSWEQFVRDVTAGVIAPVSPWCRSQLG 176
++ +P+PN DEVD+ W+ + +R A A SPW +L
Sbjct 122 ELAPRVEPQPNPDEVDSYEWVEPAELIRAAEATPFA-FSPWMVEELA 167
>gi|227833643|ref|YP_002835350.1| isopentenyl-diphosphate delta-isomerase [Corynebacterium aurimucosum
ATCC 700975]
gi|262184648|ref|ZP_06044069.1| isopentenyl-diphosphate delta-isomerase [Corynebacterium aurimucosum
ATCC 700975]
gi|227454659|gb|ACP33412.1| isopentenyl-diphosphate delta-isomerase [Corynebacterium aurimucosum
ATCC 700975]
Length=174
Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/169 (53%), Positives = 101/169 (60%), Gaps = 9/169 (5%)
Query 12 ERVVLLNDRGDATGVADKATVHTGDTPLHLAFSSYVFDLHDQLLITRRAATKRTWPAVWT 71
E VVL + G G ADKA VHT DTPLH AFS++V QLL+TRRA +K TWP VWT
Sbjct 3 ELVVLASPEGKPAGTADKAAVHTADTPLHFAFSAWVVR-DGQLLLTRRALSKLTWPGVWT 61
Query 72 NSCCGHPLPGESLPGAIRRRLAAELGLTPDRVDLILPGFRYRAAMADGTVENEICPVYRV 131
NS CGHP P E A+ RR ELGLT L+LP F YRA + G VENEICPVY
Sbjct 62 NSFCGHPGPDEPTADAVLRRGRFELGLT-GTPRLVLPDFAYRAVDSSGVVENEICPVYLF 120
Query 132 QVDQQPRPNSDEVDAIRWLSWEQFVRDVTAGVIA---PVSPWCRSQLGY 177
Q + P PN +EVD+ W VRDV A V A SPW +L +
Sbjct 121 QTEDDPAPNPEEVDSFAWAP----VRDVLAAVDATPFAFSPWMVEELTH 165
>gi|337291247|ref|YP_004630268.1| isopentenyl-diphosphate delta-isomerase [Corynebacterium ulcerans
BR-AD22]
gi|334697357|gb|AEG82154.1| isopentenyl-diphosphate delta-isomerase [Corynebacterium ulcerans
809]
gi|334699553|gb|AEG84349.1| isopentenyl-diphosphate delta-isomerase [Corynebacterium ulcerans
BR-AD22]
Length=187
Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/174 (48%), Positives = 110/174 (64%), Gaps = 10/174 (5%)
Query 11 IERVVLLNDRGDATGVADKATVHTGDTPLHLAFSSYVFDLHDQLLITRRAATKRTWPAVW 70
++ VVL++ +G+ TG A K+TVHT DTPLHLAFS YV ++L+TRRA +K+TWP VW
Sbjct 7 VDLVVLVDAQGNPTGTAPKSTVHTHDTPLHLAFSCYVLGPDGKILVTRRALSKKTWPGVW 66
Query 71 TNSCCGHPLPGESLPGAIRRRLAAELGLT---PDRVDLILPGFRYRAAMADGTVENEICP 127
TNS CGH LP E+ A RR+ E+GL+ ++ +LP FRYRA + GTVE EICP
Sbjct 67 TNSACGHLLPNETSAEAAIRRVPHEIGLSRGELKNLECVLPDFRYRAIDSQGTVEWEICP 126
Query 128 VYRVQVDQ----QPRPNSDEVDAIRWLSWEQFVRDVTAGVIAPVSPWCRSQLGY 177
V+ +D QPRP DE+D++ W+ E V A A SPW QL +
Sbjct 127 VFIAYIDDPLLLQPRP--DEIDSLAWMKPEDLFNAVDAAPFA-FSPWMVEQLEH 177
>gi|256831590|ref|YP_003160317.1| isopentenyl-diphosphate delta-isomerase, type 1 [Jonesia denitrificans
DSM 20603]
gi|256685121|gb|ACV08014.1| isopentenyl-diphosphate delta-isomerase, type 1 [Jonesia denitrificans
DSM 20603]
Length=198
Score = 150 bits (378), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/172 (47%), Positives = 101/172 (59%), Gaps = 6/172 (3%)
Query 14 VVLLNDRGDATGVADKATVHTGDTPLHLAFSSYVFDLHDQLLITRRAATKRTWPAVWTNS 73
V+LL++ A G A +ATVHT TP HLAFS Y+ + +LL+TRRA +K+TWP VWTNS
Sbjct 25 VILLDEDHQAIGTAPRATVHTPTTPRHLAFSCYLLNDDGELLVTRRALSKKTWPGVWTNS 84
Query 74 CCGHPLPGESLPGAIRRRLAAELGLTP-DRVDLILPGFRYRAAMADGTVENEICPVYRVQ 132
CGHP PGES A+ R ELG+T + + LP F Y A A G +ENE CPV+ +
Sbjct 85 FCGHPRPGESFHDALTRYAQLELGITDIHSISVALPDFEYTATDASGIIENEYCPVFYAR 144
Query 133 VDQQPRPNSDEVDAIRWLSWEQFVRDVTAGVIAP--VSPWCRSQLGYLTKLG 182
QQP PN DEV W + +V A I P +SPW +Q L G
Sbjct 145 TSQQPTPNPDEVAEYAWTPFPTYVH---AASITPFLLSPWSVAQTAQLHNRG 193
>gi|262202468|ref|YP_003273676.1| isopentenyl-diphosphate delta-isomerase, type 1 [Gordonia bronchialis
DSM 43247]
gi|262085815|gb|ACY21783.1| isopentenyl-diphosphate delta-isomerase, type 1 [Gordonia bronchialis
DSM 43247]
Length=181
Score = 149 bits (376), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/174 (50%), Positives = 104/174 (60%), Gaps = 4/174 (2%)
Query 14 VVLLNDRGDATGVADKATVHTGDTPLHLAFSSYVFDLHDQLLITRRAATKRTWPAVWTNS 73
VVLL++R G A + +VH DTPLHLAFS ++ D HD++L+TRRA K TWP VWTNS
Sbjct 6 VVLLDERRRPCGTAPRRSVHGTDTPLHLAFSCHIVDSHDRILMTRRALAKTTWPGVWTNS 65
Query 74 CCGHPLPGESLPGAIRRRLAAELGLTPDRVDLILPGFRYRAAMADGTVENEICPVYRVQV 133
CGHP PGES+ A+RR ELGL D + +LP F YRA ADG VENEICPVY +
Sbjct 66 YCGHPRPGESVEDAVRRYAPRELGLEVDGLHCVLPDFDYRAVDADGVVENEICPVYWARP 125
Query 134 DQQPRPNSDEVDAIRWLSWEQFVRDVTAGVIAPVSPWCRSQLGYLTKLGPCPAQ 187
P+PN DEV W + V A SPW Q + LGP P +
Sbjct 126 IGAPQPNPDEVMDHVWAPIDD-VWAAAANTPWAFSPWFVEQ---VRALGPRPLE 175
>gi|50955836|ref|YP_063124.1| isopentenyl-diphosphate delta-isomerase [Leifsonia xyli subsp.
xyli str. CTCB07]
gi|71648686|sp|Q6AC73.1|IDI_LEIXX RecName: Full=Isopentenyl-diphosphate Delta-isomerase; Short=IPP
isomerase; AltName: Full=IPP:DMAPP isomerase; AltName: Full=Isopentenyl
pyrophosphate isomerase
gi|50952318|gb|AAT90019.1| isopentenyldiphosphate isomerase [Leifsonia xyli subsp. xyli
str. CTCB07]
Length=185
Score = 149 bits (375), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/169 (52%), Positives = 103/169 (61%), Gaps = 3/169 (1%)
Query 9 PPIERVVLLNDRGDATGVADKATVHTGDTPLHLAFSSYVFDLHDQLLITRRAATKRTWPA 68
PP E VVLL + G G ADKATVH+ TPLHLAFS ++FD ++L+TRRA K TWP
Sbjct 3 PPREEVVLLAEDGAPIGTADKATVHSESTPLHLAFSCHLFDGDGRILVTRRALGKATWPG 62
Query 69 VWTNSCCGHPLPGESLPGAIRRRLAAELGLTPD--RVDLILPGFRYRAAMADGTVENEIC 126
VWTNS CGHP GESL AI RR ELG + D + L LP FRYRA A G VE+E+C
Sbjct 63 VWTNSFCGHPALGESLEEAIARRAHEELGTSVDALALALALPDFRYRAVDATGVVEHEMC 122
Query 127 PVYRVQVDQQPRPNSDEVDAIRWLSWEQFVRDVTAGVIAPVSPWCRSQL 175
PVY + + RP++DEV W + V A A SPW QL
Sbjct 123 PVYTATIAWELRPSADEVAEWEWADPRALLSSVAATPWA-FSPWLTLQL 170
>gi|306836646|ref|ZP_07469612.1| isopentenyl-diphosphate delta-isomerase [Corynebacterium accolens
ATCC 49726]
gi|304567476|gb|EFM43075.1| isopentenyl-diphosphate delta-isomerase [Corynebacterium accolens
ATCC 49726]
Length=183
Score = 148 bits (373), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 86/170 (51%), Positives = 104/170 (62%), Gaps = 7/170 (4%)
Query 12 ERVVLLNDRGDATGVADKATVHTGDTPLHLAFSSYVFDLHDQLLITRRAATKRTWPAVWT 71
ERVVL G A G A K+ VHT DT LH AFS++V H ++LITRRA K+TWP VWT
Sbjct 3 ERVVLAGADGKAIGTALKSEVHTTDTALHFAFSAWV-TCHGKVLITRRALGKQTWPGVWT 61
Query 72 NSCCGHPLPGESLPGAIRRRLAAELGLTPDRVD---LILPGFRYRAAMADGTVENEICPV 128
NS CGHP PGE+ AI RR ELG+ D + +LP F YRA + G VENEICPV
Sbjct 62 NSFCGHPGPGEATADAIIRRAEFELGIPADALSNLREVLPNFSYRAVDSSGLVENEICPV 121
Query 129 YRVQVDQQP--RPNSDEVDAIRWLSWEQFVRDVTAGVIAPVSPWCRSQLG 176
Y V++D Q +PN DEVD+ W+ Q + A V A SPW +L
Sbjct 122 YCVELDSQAQWQPNPDEVDSWEWVDPAQLIAAADA-VPAVFSPWMCEELA 170
>gi|260906388|ref|ZP_05914710.1| isopentenyl-diphosphate delta-isomerase [Brevibacterium linens
BL2]
Length=186
Score = 148 bits (373), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 78/157 (50%), Positives = 95/157 (61%), Gaps = 1/157 (0%)
Query 14 VVLLNDRGDATGVADKATVHTGDTPLHLAFSSYVFDLHDQLLITRRAATKRTWPAVWTNS 73
VVL++ GD GV DKA VH TP HLAFS +V D H +LL+TRRA TK+TWP VWTNS
Sbjct 2 VVLVDHTGDPIGVQDKAEVHGLSTPRHLAFSCHVVDEHGRLLVTRRALTKKTWPGVWTNS 61
Query 74 CCGHPLPGESLPGAIRRRLAAELGLTPDRVDLILPGFRYRAAMADGTVENEICPVYRVQV 133
CGHP PGE+L A+RRR ELGL+ D + LPGF Y A A G ENE CPV+ +
Sbjct 62 FCGHPGPGETLEAAVRRRAEFELGLSIDHITCALPGFAYVARDASGIEENEHCPVFIARA 121
Query 134 DQQPRPNSDEVDAIRWLSWEQFVRDVTAGVIAPVSPW 170
PN EV +W + + + + A SPW
Sbjct 122 TSSLTPNPAEVAETQWTTVAELAAAIDSAPWA-FSPW 157
>gi|170765907|ref|ZP_02900718.1| isopentenyl-diphosphate delta-isomerase, type 1 [Escherichia
albertii TW07627]
gi|170125053|gb|EDS93984.1| isopentenyl-diphosphate delta-isomerase, type 1 [Escherichia
albertii TW07627]
Length=182
Score = 147 bits (372), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 76/163 (47%), Positives = 99/163 (61%), Gaps = 1/163 (0%)
Query 12 ERVVLLNDRGDATGVADKATVHTGDTPLHLAFSSYVFDLHDQLLITRRAATKRTWPAVWT 71
E V+LLN +G +G +K HT DTPLHLAFS ++F+ QLL+TRRA +K+ WP VWT
Sbjct 4 EHVILLNAQGVPSGTLEKYAAHTADTPLHLAFSCWLFNCEKQLLVTRRALSKKAWPGVWT 63
Query 72 NSCCGHPLPGESLPGAIRRRLAAELGLTPDRVDLILPGFRYRAAMADGTVENEICPVYRV 131
NS CGHP GES A+ RR ELG+ + I P F YRA +G VENE+CPV+
Sbjct 64 NSVCGHPQQGESNEEAVIRRCRFELGVEITPPEPIYPDFYYRATDPNGIVENEVCPVFAA 123
Query 132 QVDQQPRPNSDEVDAIRWLSWEQFVRDVTAGVIAPVSPWCRSQ 174
++ +PN+DEV +W Q +R + A A SPW Q
Sbjct 124 RITSALQPNNDEVMDYQWCDLAQVLRGIDATPWA-FSPWMVMQ 165
>gi|311741344|ref|ZP_07715168.1| isopentenyl-diphosphate delta-isomerase [Corynebacterium pseudogenitalium
ATCC 33035]
gi|311303514|gb|EFQ79593.1| isopentenyl-diphosphate delta-isomerase [Corynebacterium pseudogenitalium
ATCC 33035]
Length=178
Score = 147 bits (371), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 83/172 (49%), Positives = 104/172 (61%), Gaps = 11/172 (6%)
Query 12 ERVVLLNDRGDATGVADKATVHTGDTPLHLAFSSYVFDLHDQLLITRRAATKRTWPAVWT 71
E VVL + G+ G A KA VHT DTPLH AFS+++ ++L+TRRA +KRTWP VWT
Sbjct 3 ELVVLASAEGEPIGTAPKAEVHTTDTPLHFAFSAWL-TCGGKVLVTRRALSKRTWPGVWT 61
Query 72 NSCCGHPLPGESLPGAIRRRLAAELGLTPDRVD---LILPGFRYRAAMADGTVENEICPV 128
N+ CGHP PGE A+ RR + ELG+ P + LILP F YRA + GTVENEICPV
Sbjct 62 NAFCGHPAPGEETADAVLRRASFELGIAPADLSAPRLILPDFSYRAVDSSGTVENEICPV 121
Query 129 YRVQV--DQQPRPNSDEVDAIRWLSWEQFV--RDVTAGVIAPVSPWCRSQLG 176
Y V++ D PN DEVD+ +W+ D GV SPW +L
Sbjct 122 YTVELAADAAWEPNPDEVDSFQWVEPANLFAAADAMPGVF---SPWMIDELA 170
Lambda K H
0.321 0.137 0.452
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 223603106580
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40