BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1749c
Length=185
Score E
Sequences producing significant alignments: (Bits) Value
gi|15608887|ref|NP_216265.1| integral membrane protein [Mycobact... 370 6e-101
gi|289554477|ref|ZP_06443687.1| membrane protein [Mycobacterium ... 369 1e-100
gi|340626757|ref|YP_004745209.1| putative integral membrane prot... 368 2e-100
gi|289574420|ref|ZP_06454647.1| membrane protein [Mycobacterium ... 361 3e-98
gi|308231920|ref|ZP_07663957.1| membrane protein [Mycobacterium ... 328 2e-88
gi|118618590|ref|YP_906922.1| hypothetical protein MUL_3243 [Myc... 231 3e-59
gi|183982115|ref|YP_001850406.1| hypothetical protein MMAR_2101 ... 228 3e-58
gi|307352974|ref|YP_003894025.1| hypothetical protein Mpet_0814 ... 80.9 8e-14
gi|331698093|ref|YP_004334332.1| hypothetical protein Psed_4318 ... 79.0 3e-13
gi|282890446|ref|ZP_06298969.1| hypothetical protein pah_c022o00... 79.0 3e-13
gi|262203346|ref|YP_003274554.1| hypothetical protein Gbro_3467 ... 73.6 1e-11
gi|15679874|ref|NP_276992.1| hypothetical protein MTH1892 [Metha... 72.0 4e-11
gi|212213514|ref|YP_002304450.1| hypothetical membrane spanning ... 68.9 3e-10
gi|29655349|ref|NP_821041.1| hypothetical protein [Coxiella burn... 68.9 3e-10
gi|333987750|ref|YP_004520357.1| hypothetical protein MSWAN_1542... 67.8 6e-10
gi|87308104|ref|ZP_01090246.1| hypothetical protein DSM3645_2094... 67.0 1e-09
gi|149174351|ref|ZP_01852978.1| hypothetical protein PM8797T_033... 66.6 2e-09
gi|270157551|ref|ZP_06186208.1| conserved hypothetical protein [... 65.5 4e-09
gi|325957815|ref|YP_004289281.1| hypothetical protein Metbo_0056... 64.7 5e-09
gi|217978582|ref|YP_002362729.1| hypothetical protein Msil_2438 ... 64.7 7e-09
gi|110633292|ref|YP_673500.1| hypothetical protein Meso_0938 [Me... 63.9 1e-08
gi|78185680|ref|YP_378114.1| hypothetical protein Syncc9902_2113... 62.4 3e-08
gi|343924868|ref|ZP_08764405.1| hypothetical protein GOALK_028_0... 62.4 3e-08
gi|300023018|ref|YP_003755629.1| hypothetical protein Hden_1496 ... 60.1 2e-07
gi|316935562|ref|YP_004110544.1| hypothetical protein Rpdx1_4259... 58.9 4e-07
gi|302343485|ref|YP_003808014.1| hypothetical protein Deba_2055 ... 58.5 4e-07
gi|282891256|ref|ZP_06299758.1| hypothetical protein pah_c050o02... 58.5 4e-07
gi|336119925|ref|YP_004574703.1| hypothetical protein MLP_42860 ... 58.5 5e-07
gi|323700696|ref|ZP_08112608.1| hypothetical protein DND132_3290... 56.6 2e-06
gi|312140285|ref|YP_004007621.1| integral membrane protein [Rhod... 56.2 2e-06
gi|325677057|ref|ZP_08156727.1| integral membrane protein [Rhodo... 56.2 2e-06
gi|338175104|ref|YP_004651914.1| hypothetical protein PUV_11100 ... 55.5 3e-06
gi|338739363|ref|YP_004676325.1| hypothetical protein HYPMC_2540... 54.3 9e-06
gi|268325224|emb|CBH38812.1| conserved hypothetical membrane pro... 53.1 2e-05
gi|197106380|ref|YP_002131757.1| hypothetical protein PHZ_c2919 ... 52.4 3e-05
gi|303246229|ref|ZP_07332509.1| hypothetical protein DesfrDRAFT_... 52.0 4e-05
gi|124023501|ref|YP_001017808.1| hypothetical protein P9303_1801... 52.0 4e-05
gi|343925070|ref|ZP_08764602.1| hypothetical protein GOALK_033_0... 50.1 2e-04
gi|326335464|ref|ZP_08201651.1| hypothetical protein HMPREF9071_... 48.5 5e-04
gi|298290799|ref|YP_003692738.1| hypothetical protein Snov_0791 ... 47.8 7e-04
gi|134098395|ref|YP_001104056.1| hypothetical protein SACE_1816 ... 47.4 0.001
gi|269795412|ref|YP_003314867.1| hypothetical protein Sked_21130... 45.4 0.004
gi|256818876|ref|YP_003140155.1| hypothetical protein Coch_0028 ... 44.3 0.008
gi|336115911|ref|YP_004570677.1| hypothetical protein MLP_02600 ... 44.3 0.009
gi|312864752|ref|ZP_07724983.1| conserved hypothetical protein [... 43.9 0.012
gi|338733298|ref|YP_004671771.1| hypothetical protein SNE_A14030... 43.1 0.019
gi|315224250|ref|ZP_07866089.1| conserved hypothetical protein [... 42.0 0.039
gi|158422072|ref|YP_001523364.1| hypothetical protein AZC_0448 [... 41.2 0.065
gi|297621121|ref|YP_003709258.1| conserved putative membrane pro... 41.2 0.071
gi|340350823|ref|ZP_08673797.1| hypothetical protein HMPREF9419_... 39.7 0.20
>gi|15608887|ref|NP_216265.1| integral membrane protein [Mycobacterium tuberculosis H37Rv]
gi|15841214|ref|NP_336251.1| hypothetical protein MT1792 [Mycobacterium tuberculosis CDC1551]
gi|31792937|ref|NP_855430.1| integral membrane protein [Mycobacterium bovis AF2122/97]
48 more sequence titles
Length=185
Score = 370 bits (949), Expect = 6e-101, Method: Compositional matrix adjust.
Identities = 184/185 (99%), Positives = 185/185 (100%), Gaps = 0/185 (0%)
Query 1 VLRAVNEIRQHDGTLKLGKGVGMFTIVGVIVALIGAFVQSRRHRHRPAADIHMLWWMVLI 60
+LRAVNEIRQHDGTLKLGKGVGMFTIVGVIVALIGAFVQSRRHRHRPAADIHMLWWMVLI
Sbjct 1 MLRAVNEIRQHDGTLKLGKGVGMFTIVGVIVALIGAFVQSRRHRHRPAADIHMLWWMVLI 60
Query 61 VGVVSIIGAGYHVFDGERTAELIGYTRGDGGFQWENAMGDLAIGVVGLMAYRFRGHFWLA 120
VGVVSIIGAGYHVFDGERTAELIGYTRGDGGFQWENAMGDLAIGVVGLMAYRFRGHFWLA
Sbjct 61 VGVVSIIGAGYHVFDGERTAELIGYTRGDGGFQWENAMGDLAIGVVGLMAYRFRGHFWLA 120
Query 121 TIVVLTIQYVGDAAGHIYYWVVENNTNPYNIGVPLWTDILLPIVMWALYAWSWHSNGDAV 180
TIVVLTIQYVGDAAGHIYYWVVENNTNPYNIGVPLWTDILLPIVMWALYAWSWHSNGDAV
Sbjct 121 TIVVLTIQYVGDAAGHIYYWVVENNTNPYNIGVPLWTDILLPIVMWALYAWSWHSNGDAV 180
Query 181 PKGQP 185
PKGQP
Sbjct 181 PKGQP 185
>gi|289554477|ref|ZP_06443687.1| membrane protein [Mycobacterium tuberculosis KZN 605]
gi|289439109|gb|EFD21602.1| membrane protein [Mycobacterium tuberculosis KZN 605]
Length=184
Score = 369 bits (947), Expect = 1e-100, Method: Compositional matrix adjust.
Identities = 183/184 (99%), Positives = 184/184 (100%), Gaps = 0/184 (0%)
Query 2 LRAVNEIRQHDGTLKLGKGVGMFTIVGVIVALIGAFVQSRRHRHRPAADIHMLWWMVLIV 61
+RAVNEIRQHDGTLKLGKGVGMFTIVGVIVALIGAFVQSRRHRHRPAADIHMLWWMVLIV
Sbjct 1 MRAVNEIRQHDGTLKLGKGVGMFTIVGVIVALIGAFVQSRRHRHRPAADIHMLWWMVLIV 60
Query 62 GVVSIIGAGYHVFDGERTAELIGYTRGDGGFQWENAMGDLAIGVVGLMAYRFRGHFWLAT 121
GVVSIIGAGYHVFDGERTAELIGYTRGDGGFQWENAMGDLAIGVVGLMAYRFRGHFWLAT
Sbjct 61 GVVSIIGAGYHVFDGERTAELIGYTRGDGGFQWENAMGDLAIGVVGLMAYRFRGHFWLAT 120
Query 122 IVVLTIQYVGDAAGHIYYWVVENNTNPYNIGVPLWTDILLPIVMWALYAWSWHSNGDAVP 181
IVVLTIQYVGDAAGHIYYWVVENNTNPYNIGVPLWTDILLPIVMWALYAWSWHSNGDAVP
Sbjct 121 IVVLTIQYVGDAAGHIYYWVVENNTNPYNIGVPLWTDILLPIVMWALYAWSWHSNGDAVP 180
Query 182 KGQP 185
KGQP
Sbjct 181 KGQP 184
>gi|340626757|ref|YP_004745209.1| putative integral membrane protein [Mycobacterium canettii CIPT
140010059]
gi|340004947|emb|CCC44095.1| putative integral membrane protein [Mycobacterium canettii CIPT
140010059]
Length=185
Score = 368 bits (944), Expect = 2e-100, Method: Compositional matrix adjust.
Identities = 183/185 (99%), Positives = 184/185 (99%), Gaps = 0/185 (0%)
Query 1 VLRAVNEIRQHDGTLKLGKGVGMFTIVGVIVALIGAFVQSRRHRHRPAADIHMLWWMVLI 60
+LRAVNEIRQHDGTLKLGKGVGMFTIVGVIVALIGAFVQSRRHRHRPAADIHMLWWMVLI
Sbjct 1 MLRAVNEIRQHDGTLKLGKGVGMFTIVGVIVALIGAFVQSRRHRHRPAADIHMLWWMVLI 60
Query 61 VGVVSIIGAGYHVFDGERTAELIGYTRGDGGFQWENAMGDLAIGVVGLMAYRFRGHFWLA 120
VGVVSIIGAGYHVFDGERTAELIGYTRGDGGFQWENAMGDLAIGVVGLMAYRFRGHFWLA
Sbjct 61 VGVVSIIGAGYHVFDGERTAELIGYTRGDGGFQWENAMGDLAIGVVGLMAYRFRGHFWLA 120
Query 121 TIVVLTIQYVGDAAGHIYYWVVENNTNPYNIGVPLWTDILLPIVMWALYAWSWHSNGDAV 180
TIVVLTIQYVGDAAGHIYYWVVENNTNPYNIGVPLWTDILLPIVMWALYAWSWHS GDAV
Sbjct 121 TIVVLTIQYVGDAAGHIYYWVVENNTNPYNIGVPLWTDILLPIVMWALYAWSWHSKGDAV 180
Query 181 PKGQP 185
PKGQP
Sbjct 181 PKGQP 185
>gi|289574420|ref|ZP_06454647.1| membrane protein [Mycobacterium tuberculosis K85]
gi|289538851|gb|EFD43429.1| membrane protein [Mycobacterium tuberculosis K85]
Length=206
Score = 361 bits (926), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 180/182 (99%), Positives = 181/182 (99%), Gaps = 0/182 (0%)
Query 1 VLRAVNEIRQHDGTLKLGKGVGMFTIVGVIVALIGAFVQSRRHRHRPAADIHMLWWMVLI 60
+LRAVNEIRQHDGTLKLGKGVGMFTIVGVIVALIGAFVQSRRHRHRPAADIHMLWWMVLI
Sbjct 1 MLRAVNEIRQHDGTLKLGKGVGMFTIVGVIVALIGAFVQSRRHRHRPAADIHMLWWMVLI 60
Query 61 VGVVSIIGAGYHVFDGERTAELIGYTRGDGGFQWENAMGDLAIGVVGLMAYRFRGHFWLA 120
VGVVSIIGAGYHVFDGERTAELIGYTRGDGGFQWENAMGDLAIGVVGLMAYRFRGHFWLA
Sbjct 61 VGVVSIIGAGYHVFDGERTAELIGYTRGDGGFQWENAMGDLAIGVVGLMAYRFRGHFWLA 120
Query 121 TIVVLTIQYVGDAAGHIYYWVVENNTNPYNIGVPLWTDILLPIVMWALYAWSWHSNGDAV 180
TIVVLTIQYVGDAAGHIYYWVVENNTNPYNIGVPLWTDILLPIVMWALYAWSWHSNGDAV
Sbjct 121 TIVVLTIQYVGDAAGHIYYWVVENNTNPYNIGVPLWTDILLPIVMWALYAWSWHSNGDAV 180
Query 181 PK 182
K
Sbjct 181 RK 182
>gi|308231920|ref|ZP_07663957.1| membrane protein [Mycobacterium tuberculosis SUMu001]
gi|308369517|ref|ZP_07666746.1| membrane protein [Mycobacterium tuberculosis SUMu002]
gi|308370812|ref|ZP_07667024.1| membrane protein [Mycobacterium tuberculosis SUMu003]
23 more sequence titles
Length=163
Score = 328 bits (841), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 163/163 (100%), Positives = 163/163 (100%), Gaps = 0/163 (0%)
Query 23 MFTIVGVIVALIGAFVQSRRHRHRPAADIHMLWWMVLIVGVVSIIGAGYHVFDGERTAEL 82
MFTIVGVIVALIGAFVQSRRHRHRPAADIHMLWWMVLIVGVVSIIGAGYHVFDGERTAEL
Sbjct 1 MFTIVGVIVALIGAFVQSRRHRHRPAADIHMLWWMVLIVGVVSIIGAGYHVFDGERTAEL 60
Query 83 IGYTRGDGGFQWENAMGDLAIGVVGLMAYRFRGHFWLATIVVLTIQYVGDAAGHIYYWVV 142
IGYTRGDGGFQWENAMGDLAIGVVGLMAYRFRGHFWLATIVVLTIQYVGDAAGHIYYWVV
Sbjct 61 IGYTRGDGGFQWENAMGDLAIGVVGLMAYRFRGHFWLATIVVLTIQYVGDAAGHIYYWVV 120
Query 143 ENNTNPYNIGVPLWTDILLPIVMWALYAWSWHSNGDAVPKGQP 185
ENNTNPYNIGVPLWTDILLPIVMWALYAWSWHSNGDAVPKGQP
Sbjct 121 ENNTNPYNIGVPLWTDILLPIVMWALYAWSWHSNGDAVPKGQP 163
>gi|118618590|ref|YP_906922.1| hypothetical protein MUL_3243 [Mycobacterium ulcerans Agy99]
gi|118570700|gb|ABL05451.1| conserved hypothetical membrane protein [Mycobacterium ulcerans
Agy99]
Length=170
Score = 231 bits (590), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 112/164 (69%), Positives = 134/164 (82%), Gaps = 0/164 (0%)
Query 19 KGVGMFTIVGVIVALIGAFVQSRRHRHRPAADIHMLWWMVLIVGVVSIIGAGYHVFDGER 78
+ V MFTI V+VA++G FVQS R + R AAD+HM+WWMV +VG S++GAG+HV DG
Sbjct 2 RKVDMFTIAAVLVAVVGGFVQSWRSKDRLAADVHMVWWMVAVVGFNSLLGAGFHVLDGPH 61
Query 79 TAELIGYTRGDGGFQWENAMGDLAIGVVGLMAYRFRGHFWLATIVVLTIQYVGDAAGHIY 138
A LIGYTRGDGGFQWENAMGDLAIGVVG+MAY FRGHFWLATIVVL++QY+GDAAGHIY
Sbjct 62 IATLIGYTRGDGGFQWENAMGDLAIGVVGIMAYWFRGHFWLATIVVLSVQYLGDAAGHIY 121
Query 139 YWVVENNTNPYNIGVPLWTDILLPIVMWALYAWSWHSNGDAVPK 182
+W+ E+N P NIGVPLW D++LPI++WALY S GDAVP
Sbjct 122 FWIAEHNVEPDNIGVPLWIDVVLPIIVWALYVGSRRHGGDAVPD 165
>gi|183982115|ref|YP_001850406.1| hypothetical protein MMAR_2101 [Mycobacterium marinum M]
gi|183175441|gb|ACC40551.1| conserved hypothetical membrane protein [Mycobacterium marinum
M]
Length=165
Score = 228 bits (581), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 110/160 (69%), Positives = 132/160 (83%), Gaps = 0/160 (0%)
Query 23 MFTIVGVIVALIGAFVQSRRHRHRPAADIHMLWWMVLIVGVVSIIGAGYHVFDGERTAEL 82
MFTI V+VA++G FVQS R + R AAD+H++WWMV +VG S++GAG+HV DG A L
Sbjct 1 MFTIAAVLVAVVGGFVQSWRSKDRLAADVHLVWWMVAVVGFNSLLGAGFHVLDGPHIATL 60
Query 83 IGYTRGDGGFQWENAMGDLAIGVVGLMAYRFRGHFWLATIVVLTIQYVGDAAGHIYYWVV 142
IGYTRGDGGFQWENAMGDLAIGVVG+MAY FRGHFWLATIVVL++QY+GDAAGHIY+W+
Sbjct 61 IGYTRGDGGFQWENAMGDLAIGVVGIMAYWFRGHFWLATIVVLSVQYLGDAAGHIYFWIA 120
Query 143 ENNTNPYNIGVPLWTDILLPIVMWALYAWSWHSNGDAVPK 182
E+N P NIGVPLW D++LPI++WALY S GDAVP
Sbjct 121 EHNVEPDNIGVPLWIDVVLPIIVWALYIGSRRHGGDAVPD 160
>gi|307352974|ref|YP_003894025.1| hypothetical protein Mpet_0814 [Methanoplanus petrolearius DSM
11571]
gi|307156207|gb|ADN35587.1| conserved hypothetical protein [Methanoplanus petrolearius DSM
11571]
Length=158
Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/148 (36%), Positives = 77/148 (53%), Gaps = 2/148 (1%)
Query 22 GMFTIVGVIVALIGAFVQSRRHRHRPAADIHMLWWMVLIVGVVSIIGAGYHVFDGERTAE 81
M I+ V+VA+I + + H + W +V+ VGV II H F + AE
Sbjct 7 AMMLILSVLVAIISLLLTGTMNIHNVVYA-FLFWLLVIGVGVTGIIAFSGHFFKADGIAE 65
Query 82 LIGYTRGDGGFQWENAMGDLAIGVVGLMAYRFRGHFWLATIVVLTIQYVGDAAGHIYYWV 141
IG+ +G+ FQ E A +L IG+ G++ + + FWLA IV+ +I G GHIY
Sbjct 66 KIGWPKGNP-FQREIAFTNLGIGIAGVLCFFLKDGFWLAVIVMYSIFSAGAGFGHIYEQR 124
Query 142 VENNTNPYNIGVPLWTDILLPIVMWALY 169
N YN G + DIL+P+V+ AL+
Sbjct 125 KNENAAEYNTGAVVAFDILMPVVLIALW 152
>gi|331698093|ref|YP_004334332.1| hypothetical protein Psed_4318 [Pseudonocardia dioxanivorans
CB1190]
gi|326952782|gb|AEA26479.1| hypothetical protein Psed_4318 [Pseudonocardia dioxanivorans
CB1190]
Length=182
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/125 (40%), Positives = 68/125 (55%), Gaps = 4/125 (3%)
Query 31 VALIGAFVQSRRHRHRPAA---DIHMLWWMVLIVGVVSIIGAGYHVFDGERTAELIGYTR 87
+ALIGA V RHR I +LW +V+ +GV I+ AG H+ G TA IG+
Sbjct 13 IALIGALVHIGLTRHRTPERTLTIALLWGLVVALGVGEIVTAGSHLLFGPATAAQIGFPA 72
Query 88 GDGGFQWENAMGDLAIGVVGLMAYRFRGHFWLATIVVLTIQYVGDAAGHIYYWVVENNTN 147
G+ FQ E + +L+ GV+G+ Y RG FW AT++ + + G HIY + NT
Sbjct 73 GNP-FQTEVGVANLSYGVLGIACYWLRGGFWTATVLGYLVYFWGCGIDHIYQYAAHGNTA 131
Query 148 PYNIG 152
PYN G
Sbjct 132 PYNWG 136
>gi|282890446|ref|ZP_06298969.1| hypothetical protein pah_c022o004 [Parachlamydia acanthamoebae
str. Hall's coccus]
gi|338175422|ref|YP_004652232.1| hypothetical protein PUV_14280 [Parachlamydia acanthamoebae UV7]
gi|281499443|gb|EFB41739.1| hypothetical protein pah_c022o004 [Parachlamydia acanthamoebae
str. Hall's coccus]
gi|336479780|emb|CCB86378.1| putative uncharacterized protein [Parachlamydia acanthamoebae
UV7]
Length=162
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 79/140 (57%), Gaps = 4/140 (2%)
Query 40 SRRHRHR-PAADIHMLWWMVLIVGVVSIIGAGYHVFDGERTAELIGYTRGDGGFQWENAM 98
S+ R A++ +L+ +V VG++S + +F E AE +G+ FQ E
Sbjct 22 SKEERTLGEKAELFLLYQIVFNVGLISFLSFYGFIFLPELVAEKLGWPTCP--FQHEMGN 79
Query 99 GDLAIGVVGLMAYRFRGHFWLATIVVLTIQYVGDAAGHIYYWVVENNTNPYNIGVPLWTD 158
+LA GV+G++A RG+FW A ++ ++I +GDA GH+ V NN N+G+PL+TD
Sbjct 80 VNLAFGVLGILAIWLRGNFWTAIVIGVSIWLLGDAVGHVVDMVQNNNYAEGNVGIPLYTD 139
Query 159 ILLPIVMW-ALYAWSWHSNG 177
I +P+V+ A Y W + G
Sbjct 140 IAIPVVLLIAFYFWKKYQPG 159
>gi|262203346|ref|YP_003274554.1| hypothetical protein Gbro_3467 [Gordonia bronchialis DSM 43247]
gi|262086693|gb|ACY22661.1| hypothetical protein Gbro_3467 [Gordonia bronchialis DSM 43247]
Length=168
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/145 (34%), Positives = 74/145 (52%), Gaps = 10/145 (6%)
Query 31 VALIGAFVQSRRHRHRPAADI------HMLWWMVLIVGVVSIIGAGYHVFDGERTAELIG 84
V + G V + P D+ + + WM+ + G ++ G H+F GE AE IG
Sbjct 24 VGIAGTIVSTALDAATPGGDLGRDLLENSILWMIGVQGWMTGFG---HMFFGEPIAESIG 80
Query 85 YTRGDGGFQWENAMGDLAIGVVGLMAYRFRGHFWLATIVVLTIQYVGDAAGHIYYWVVEN 144
+ +QWE + LA GV+G+MA F FWLATI+ + Y+G A GH+ +V
Sbjct 81 WP-AKTPWQWEVGLASLATGVLGVMASGFGTQFWLATIIAFAVFYLGAAIGHVREMIVHK 139
Query 145 NTNPYNIGVPLWTDILLPIVMWALY 169
N P N G + D+++P+ + LY
Sbjct 140 NFAPGNAGPIFFFDVVVPVYLIILY 164
>gi|15679874|ref|NP_276992.1| hypothetical protein MTH1892 [Methanothermobacter thermautotrophicus
str. Delta H]
gi|2623024|gb|AAB86352.1| conserved protein [Methanothermobacter thermautotrophicus str.
Delta H]
Length=168
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/108 (39%), Positives = 66/108 (62%), Gaps = 1/108 (0%)
Query 49 ADIHMLWWMVLIVGVVSIIGAGYHVFDGERTAELIGYTRGDGGFQWENAMGDLAIGVVGL 108
A+I +L + + VG+ S+ H F + A IG+ G FQ E A +L+ GV+GL
Sbjct 37 AEIALLSILTVQVGLGSLWAFLGHAFMPDVIATYIGWPTGSP-FQLEVAFANLSFGVMGL 95
Query 109 MAYRFRGHFWLATIVVLTIQYVGDAAGHIYYWVVENNTNPYNIGVPLW 156
++++FRG FW+ATI+ ++ Y+G A GHI ++ N +P NIG PL+
Sbjct 96 LSWKFRGEFWMATIIGFSVFYLGAAYGHIMDALINLNYSPGNIGAPLY 143
>gi|212213514|ref|YP_002304450.1| hypothetical membrane spanning protein [Coxiella burnetii CbuG_Q212]
gi|212011924|gb|ACJ19305.1| hypothetical membrane spanning protein [Coxiella burnetii CbuG_Q212]
Length=160
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/127 (31%), Positives = 73/127 (58%), Gaps = 1/127 (0%)
Query 26 IVGVIVALIGAFVQSRRHRHRPAADIHMLWWMVLIVGVVSIIGAGYHVFDGERTAELIGY 85
++ +++A+I +++ ++ + D+++ +++ VG+V +IG HVF ++TA +IG+
Sbjct 8 LLCILLAVIHHWIKRNQYSKKQIVDLYLSYFLFFTVGLVGLIGFISHVFYADQTARMIGW 67
Query 86 TRGDGGFQWENAMGDLAIGVVGLMAYRFRGHFWLATIVVLTIQYVGDAAGHIYYWVVENN 145
G FQ+E D A G++G+++ R FWLAT + + +G GHI+ V N
Sbjct 68 APGSP-FQFEVGFHDGAWGLLGILSLWIRDKFWLATGLGWSFFMLGATYGHIHQMAVHGN 126
Query 146 TNPYNIG 152
PYN G
Sbjct 127 FAPYNAG 133
>gi|29655349|ref|NP_821041.1| hypothetical protein [Coxiella burnetii RSA 493]
gi|153206881|ref|ZP_01945699.1| putative membrane protein [Coxiella burnetii 'MSU Goat Q177']
gi|154706283|ref|YP_001425467.1| hypothetical membrane spanning protein [Coxiella burnetii Dugway
5J108-111]
9 more sequence titles
Length=160
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/127 (31%), Positives = 73/127 (58%), Gaps = 1/127 (0%)
Query 26 IVGVIVALIGAFVQSRRHRHRPAADIHMLWWMVLIVGVVSIIGAGYHVFDGERTAELIGY 85
++ +++A+I +++ ++ + D+++ +++ VG+V +IG HVF ++TA +IG+
Sbjct 8 LLCILLAVIHHWIKRNQYSKKQIVDLYLSYFLFFTVGLVGLIGFISHVFYADQTARMIGW 67
Query 86 TRGDGGFQWENAMGDLAIGVVGLMAYRFRGHFWLATIVVLTIQYVGDAAGHIYYWVVENN 145
G FQ+E D A G++G+++ R FWLAT + + +G GHI+ V N
Sbjct 68 APGSP-FQFEVGFHDGAWGLLGILSLWIRDKFWLATGLGWSFFMLGATYGHIHQMAVHGN 126
Query 146 TNPYNIG 152
PYN G
Sbjct 127 FAPYNAG 133
>gi|333987750|ref|YP_004520357.1| hypothetical protein MSWAN_1542 [Methanobacterium sp. SWAN-1]
gi|333825894|gb|AEG18556.1| hypothetical protein MSWAN_1542 [Methanobacterium sp. SWAN-1]
Length=161
Score = 67.8 bits (164), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/112 (34%), Positives = 62/112 (56%), Gaps = 1/112 (0%)
Query 26 IVGVIVALIGAFVQSRRHRHRPAADIHMLWWMVLIVGVVSIIGAGYHVFDGERTAELIGY 85
I+ VI AL F+ ++ +++ +V++VG SI H F + A IG+
Sbjct 7 ILAVICALAHLFLSKTPKTKNRVIELFLMYTLVVMVGFTSIWAFLGHAFLANQIAAYIGW 66
Query 86 TRGDGGFQWENAMGDLAIGVVGLMAYRFRGHFWLATIVVLTIQYVGDAAGHI 137
G+ FQ+E AM +L+ G++G++ +FR +FW AT+V T Y G A GH+
Sbjct 67 PAGNP-FQFEVAMANLSYGILGILCIKFRDNFWTATVVAFTTFYWGAAYGHV 117
>gi|87308104|ref|ZP_01090246.1| hypothetical protein DSM3645_20942 [Blastopirellula marina DSM
3645]
gi|87289186|gb|EAQ81078.1| hypothetical protein DSM3645_20942 [Blastopirellula marina DSM
3645]
Length=180
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/160 (32%), Positives = 70/160 (44%), Gaps = 3/160 (1%)
Query 24 FTIVGVIVALIGAFVQSRRHRHRPAADIHMLWWMVLIVGVVSIIGAGYHVFDGERTAELI 83
F ++G+ + V + + + ++ + VG+ I HVF GE A+ I
Sbjct 17 FFLIGLFCSAASLAVHRQTLTQHRVFEALLAYYCLCGVGLFYIYNFVMHVFFGEIAAKFI 76
Query 84 GYTRGDGGFQWENAMGDLAIGVVGLMAYRFRGHFWLATIVVLTIQYVGDAAGHIYYWVVE 143
G+ D FQ E L GVVGL+A++ LA V G AAGHIY V
Sbjct 77 GWA--DSPFQLEVGFASLGFGVVGLLAFQKDFGLRLAANVGPACFMWGAAAGHIYQMVAR 134
Query 144 NNTNPYNIGVPLWTDILLPIV-MWALYAWSWHSNGDAVPK 182
+N P N GV W DI LP + + L WS S P
Sbjct 135 HNFAPGNAGVMFWADIFLPAIGFFFLIGWSCSSPDLPTPP 174
>gi|149174351|ref|ZP_01852978.1| hypothetical protein PM8797T_03354 [Planctomyces maris DSM 8797]
gi|148846896|gb|EDL61232.1| hypothetical protein PM8797T_03354 [Planctomyces maris DSM 8797]
Length=179
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/153 (31%), Positives = 74/153 (49%), Gaps = 6/153 (3%)
Query 24 FTIVGVIVALIGAFVQSRRHRHRPAADIHMLWWMVLIVGVVSIIGAGYHVFDGERTAELI 83
F ++G+IV+ I + Q R + ++++ VG H F GE A I
Sbjct 16 FLVLGLIVSGISLWRQKRPRNAAVIIEACFAYFLLFSVGCSFFYNFIMHSFFGETAARYI 75
Query 84 GYTRGDGGFQWENAMGDLAIGVVGLMAYRFRGHFWL--ATIVVLTIQYVGDAAGHIYYWV 141
G+ + FQ+E L VVG +A FRG F + A +V ++ +G A GHIY +
Sbjct 76 GWEQSP--FQFEVGTASLGYAVVGFLA--FRGSFGMRAAAVVGPSMFLLGAAGGHIYQMI 131
Query 142 VENNTNPYNIGVPLWTDILLPIVMWALYAWSWH 174
+N P N G+ +TDIL+PI+ + L +
Sbjct 132 TAHNFAPGNAGIIFYTDILIPIIGFVLLGMQYQ 164
>gi|270157551|ref|ZP_06186208.1| conserved hypothetical protein [Legionella longbeachae D-4968]
gi|289164068|ref|YP_003454206.1| Hypothetical integral membrane protein [Legionella longbeachae
NSW150]
gi|269989576|gb|EEZ95830.1| conserved hypothetical protein [Legionella longbeachae D-4968]
gi|288857241|emb|CBJ11066.1| Hypothetical integral membrane protein [Legionella longbeachae
NSW150]
Length=170
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/139 (31%), Positives = 67/139 (49%), Gaps = 2/139 (1%)
Query 26 IVGVIVALIGAFVQSRRHRHRPAADIHMLWWMVLIVGVVSIIGAGYHVFDGERTAELIGY 85
I+ I A I +Q DI ++++ +G+ I HVF G+ A IG+
Sbjct 18 ILSAIFAGISISLQKNPMSKAKYIDILFAYFLLFNIGISFIYNFIVHVFFGDMAAAFIGW 77
Query 86 TRGDGGFQWENAMGDLAIGVVGLMAYRFRGHFWLATIVVLTIQYVGDAAGHIYYWVVENN 145
++ FQ E L GVVG+ ++ F AT++ ++ G A GH+Y +V NN
Sbjct 78 SQSP--FQLEVGFASLGFGVVGIFSFWAGLGFRAATMIAPSMFLWGAAGGHMYQMIVANN 135
Query 146 TNPYNIGVPLWTDILLPIV 164
P N G W+DI LP++
Sbjct 136 FAPGNAGFIFWSDIFLPLI 154
>gi|325957815|ref|YP_004289281.1| hypothetical protein Metbo_0056 [Methanobacterium sp. AL-21]
gi|325329247|gb|ADZ08309.1| hypothetical protein Metbo_0056 [Methanobacterium sp. AL-21]
Length=166
Score = 64.7 bits (156), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/131 (32%), Positives = 71/131 (55%), Gaps = 1/131 (0%)
Query 38 VQSRRHRHRPAADIHMLWWMVLIVGVVSIIGAGYHVFDGERTAELIGYTRGDGGFQWENA 97
+++R +L ++V+ VG+ SI H F AE IG+ G FQ E A
Sbjct 24 IKNRSLNGLIIIKTFLLSFLVIFVGIGSIWAFIGHAFMPVLVAESIGWATGSP-FQTEVA 82
Query 98 MGDLAIGVVGLMAYRFRGHFWLATIVVLTIQYVGDAAGHIYYWVVENNTNPYNIGVPLWT 157
+LAIG++G++ Y FR +FW+AT++ +I +G A H+ + +N + N+G +
Sbjct 83 FANLAIGILGILCYFFRDNFWVATVIASSIFLLGAAYVHLINIISYSNHSVGNVGTIFFM 142
Query 158 DILLPIVMWAL 168
DI+ P+++ L
Sbjct 143 DIIGPVILVVL 153
>gi|217978582|ref|YP_002362729.1| hypothetical protein Msil_2438 [Methylocella silvestris BL2]
gi|217503958|gb|ACK51367.1| hypothetical protein Msil_2438 [Methylocella silvestris BL2]
Length=164
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/121 (35%), Positives = 64/121 (53%), Gaps = 2/121 (1%)
Query 44 RHRPAADIHMLWWMVLIVGVVSIIGAGYHVFDGERTAELIGYTRGDGGFQWENAMGDLAI 103
R +P AD + W ++L +G+ + A +H+ E A IG+ D FQ+E M DL I
Sbjct 33 RGKPLADRTLSWLLLLPIGLGGLWSAFFHLAFPEVAARAIGWM--DSPFQFEVGMADLGI 90
Query 104 GVVGLMAYRFRGHFWLATIVVLTIQYVGDAAGHIYYWVVENNTNPYNIGVPLWTDILLPI 163
GV G +A+R F A +V+ I + GD+ GH+ +V N N G W D+ LP+
Sbjct 91 GVAGCLAFRASWGFRAAVVVISAIFFFGDSIGHLRQMIVARNFAIDNAGPVFWLDVALPV 150
Query 164 V 164
+
Sbjct 151 L 151
>gi|110633292|ref|YP_673500.1| hypothetical protein Meso_0938 [Mesorhizobium sp. BNC1]
gi|110284276|gb|ABG62335.1| hypothetical protein Meso_0938 [Chelativorans sp. BNC1]
Length=173
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/144 (29%), Positives = 70/144 (49%), Gaps = 5/144 (3%)
Query 24 FTIVGVIVALIG---AFVQSRRHRHRPAADIHMLWWMVLIVGVVSIIGAGYHVFDGERTA 80
FT+ +I+A I + ++R R + + ++ + ++G + HVF G+ A
Sbjct 12 FTLTFLIIAAIATVISLARARGSREHQLPEKALAFYALFVIGFTFLYNFVMHVFFGDMAA 71
Query 81 ELIGYTRGDGGFQWENAMGDLAIGVVGLMAYRFRGHFWLATIVVLTIQYVGDAAGHIYYW 140
IG+ + FQ E L +VG +AY+ LA +V +G AAGH+Y
Sbjct 72 SFIGWE--NSPFQAEVGWASLGFAIVGFLAYKGGFEMRLAAVVGPASFLLGAAAGHVYQM 129
Query 141 VVENNTNPYNIGVPLWTDILLPIV 164
+ N P N G+ +TDIL+P++
Sbjct 130 ITAGNFAPGNAGIIFYTDILVPLL 153
>gi|78185680|ref|YP_378114.1| hypothetical protein Syncc9902_2113 [Synechococcus sp. CC9902]
gi|78169974|gb|ABB27071.1| hypothetical protein Syncc9902_2113 [Synechococcus sp. CC9902]
Length=168
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/137 (32%), Positives = 72/137 (53%), Gaps = 4/137 (2%)
Query 31 VALIGAFVQSRRHRHRPA-ADIHMLWWMVLIVGVVSIIGAGYHVFDGERTAELIGYTRGD 89
+AL+ ++Q+RR A+ +LW ++GV + G H+ G AE IG+ +
Sbjct 19 IALLLGWIQTRRQWDVGRWAEASLLWIAFWVLGVAGVYGFVCHLAFGPFIAEQIGWP--N 76
Query 90 GGFQWENAMGDLAIGVVGLMAYRFRGH-FWLATIVVLTIQYVGDAAGHIYYWVVENNTNP 148
FQ E A +L IG++GL ++ +R H + LA +V + D GH+ +V N+ P
Sbjct 77 SPFQNEVAYANLTIGILGLSSFFYRRHDYLLAAMVGYCSWFFADGVGHVVSLLVSNDVAP 136
Query 149 YNIGVPLWTDILLPIVM 165
N G L+TD+ P ++
Sbjct 137 SNAGSVLYTDLFTPFLV 153
>gi|343924868|ref|ZP_08764405.1| hypothetical protein GOALK_028_00090 [Gordonia alkanivorans NBRC
16433]
gi|343765214|dbj|GAA11331.1| hypothetical protein GOALK_028_00090 [Gordonia alkanivorans NBRC
16433]
Length=160
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/134 (33%), Positives = 66/134 (50%), Gaps = 10/134 (7%)
Query 31 VALIGAFVQSRRHRHRPAADI------HMLWWMVLIVGVVSIIGAGYHVFDGERTAELIG 84
V L+G V + P D+ + + WM+ + G ++ G H+F GE AE IG
Sbjct 16 VGLVGTIVMTVIDLLSPGGDLGRDLLENSVLWMIGVQGWMTGCG---HMFFGEPIAESIG 72
Query 85 YTRGDGGFQWENAMGDLAIGVVGLMAYRFRGHFWLATIVVLTIQYVGDAAGHIYYWVVEN 144
+ +QWE + LA GV+G++A F F LATI+ ++ Y+G A GH+ V
Sbjct 73 WPS-KTPWQWEVGLASLATGVLGVIASGFDDEFTLATIIAFSVFYLGAAVGHVREMVTRR 131
Query 145 NTNPYNIGVPLWTD 158
N P N G + D
Sbjct 132 NFKPGNAGPIFFFD 145
>gi|300023018|ref|YP_003755629.1| hypothetical protein Hden_1496 [Hyphomicrobium denitrificans
ATCC 51888]
gi|299524839|gb|ADJ23308.1| conserved hypothetical protein [Hyphomicrobium denitrificans
ATCC 51888]
Length=176
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/154 (30%), Positives = 67/154 (44%), Gaps = 3/154 (1%)
Query 24 FTIVGVIVALIGAFVQSRRHRHRPAADIHMLWWMVLIVGVVSIIGAGYHVFDGERTAELI 83
F +VG AL+ + + + W++ +GV H F GE A I
Sbjct 20 FLVVGFAFALVAIARAEKPVSSATVVEKLLSWYVFWSIGVGYFYNFVMHAFFGEMVASFI 79
Query 84 GYTRGDGGFQWENAMGDLAIGVVGLMAYRFRGHFWLATIVVLTIQYVGDAAGHIYYWVVE 143
G+ D FQ+E A L VG +A LA +V + +G AAGH+Y V
Sbjct 80 GWP--DSPFQFEVATASLGFSAVGFLAAFRSFDLRLAAVVGPALFMLGAAAGHVYQMVEH 137
Query 144 NNTNPYNIGVPLWTDILLPIVMWALYAWSWHSNG 177
N P N GV + DI +P++ + L W H +G
Sbjct 138 RNFAPGNAGVVFYMDIAIPLIGFGLL-WLRHRSG 170
>gi|316935562|ref|YP_004110544.1| hypothetical protein Rpdx1_4259 [Rhodopseudomonas palustris DX-1]
gi|315603276|gb|ADU45811.1| hypothetical protein Rpdx1_4259 [Rhodopseudomonas palustris DX-1]
Length=183
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/145 (31%), Positives = 66/145 (46%), Gaps = 2/145 (1%)
Query 24 FTIVGVIVALIGAFVQSRRHRHRPAADIHMLWWMVLIVGVVSIIGAGYHVFDGERTAELI 83
F ++G++ L+ + R D + W + +GV H F G+ +A I
Sbjct 20 FFVIGLLFGLVAIARAPKPLRFPEVIDRLLAWHLFWSIGVCYFYNFVMHGFFGKMSAAFI 79
Query 84 GYTRGDGGFQWENAMGDLAIGVVGLMAYRFRGHFWLATIVVLTIQYVGDAAGHIYYWVVE 143
G+ D FQ+E A L VG +A LA IV ++ +G A GHI V
Sbjct 80 GW--ADSPFQFEVATASLGFSAVGFLAAFRSFDLRLAAIVGPSLFTLGAAVGHINQMVTH 137
Query 144 NNTNPYNIGVPLWTDILLPIVMWAL 168
+N P N GV +TDI++P+ AL
Sbjct 138 HNFAPGNAGVVFYTDIIIPLFGAAL 162
>gi|302343485|ref|YP_003808014.1| hypothetical protein Deba_2055 [Desulfarculus baarsii DSM 2075]
gi|301640098|gb|ADK85420.1| hypothetical protein Deba_2055 [Desulfarculus baarsii DSM 2075]
Length=175
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/139 (31%), Positives = 68/139 (49%), Gaps = 5/139 (3%)
Query 23 MFTIVGVIVALIGAFVQSR---RHRHRPAADIHMLWWMVLIVGVVSIIGAGYHVFDGERT 79
M T + ++ LIGAF ++ H+ R + + + +G S+ A +H
Sbjct 16 MSTSLLLLALLIGAFFAAKVKGTHKRRAVTECFLRPLLFFSLGCASLWNAYWHAVQPAEV 75
Query 80 AELIGYTRGDGGFQWENAMGDLAIGVVGLMAYRFRGHFWLATIVVLTIQYVGDAAGHIYY 139
A IG+ FQWE AM +L + + GL+A++ F LAT + + G AAGHI+
Sbjct 76 ARFIGWQPSP--FQWEIAMTNLGLSLAGLIAWQASRGFRLATALFAAVFLWGAAAGHIWQ 133
Query 140 WVVENNTNPYNIGVPLWTD 158
V +T P N G ++TD
Sbjct 134 LVYLQDTAPGNAGGIVYTD 152
>gi|282891256|ref|ZP_06299758.1| hypothetical protein pah_c050o023 [Parachlamydia acanthamoebae
str. Hall's coccus]
gi|281498753|gb|EFB41070.1| hypothetical protein pah_c050o023 [Parachlamydia acanthamoebae
str. Hall's coccus]
Length=181
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/153 (30%), Positives = 77/153 (51%), Gaps = 6/153 (3%)
Query 16 KLGKGVGMFTIVGVIVALIGAFV---QSRRHRHRPAADIHMLWWMVLIVGVVSIIGAGYH 72
+ K V M I ++ALI A V Q + + I + + +G + +IG H
Sbjct 14 SINKEVDMLPIFLFVIALIYAIVKIFQDKVTTKKEQLAILLKSIIFFNIGCMGLIGFYAH 73
Query 73 VFDGERTAELIGYTRGDGGFQWENAMGDLAIGVVGLMAYRFRGHFWLATIVVLTIQYVGD 132
F + TA IG+ G+ FQ+E A+ +LA G++G+++ F FW+ T++ + G
Sbjct 74 TFMPDETARNIGWPTGNP-FQFEVAVANLAFGILGVLSPWFPSLFWVPTVLGSVVFLFGC 132
Query 133 AAGHIYYWVVENNTNPYNIGVPLWT-DILLPIV 164
A GH W + + PYN G +W D ++P++
Sbjct 133 AWGHFVQW-GKGDVAPYNAGPFVWFGDGVIPLI 164
>gi|336119925|ref|YP_004574703.1| hypothetical protein MLP_42860 [Microlunatus phosphovorus NM-1]
gi|334687715|dbj|BAK37300.1| hypothetical protein MLP_42860 [Microlunatus phosphovorus NM-1]
Length=194
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/159 (28%), Positives = 74/159 (47%), Gaps = 5/159 (3%)
Query 26 IVGVIVALIGAFVQSRRHRHRPAADIHMLWWMVLIVGVVSIIGAGYHVFDGERTAELIGY 85
++G++VAL+ + + + + +++ +G+ ++ +H F GE A LIG+
Sbjct 18 VLGMLVALVLIAIGPKPITAARVYETLLRQFLLFGIGLAYVVNFIFHSFFGELAASLIGW 77
Query 86 TRGDGGFQWENAMGDLAIGVVGLMAYRFRGHFWLATIVVLTIQYVGDAAGHIYYWVVENN 145
D FQ+E + L G+VG A A ++ G A GHI V N
Sbjct 78 E--DSPFQFEVGVASLGFGLVGFFAISRDTAVRFAALLGPAAFVWGAAVGHIIQIVTAGN 135
Query 146 TNPYNIGVPLWTDILLPIVMWALYAWSWHSNGDAVPKGQ 184
+P N G L+ DILLP + + L W + +P+GQ
Sbjct 136 HSPGNAGFMLYADILLPFISFVLL---WLAARHPLPEGQ 171
>gi|323700696|ref|ZP_08112608.1| hypothetical protein DND132_3290 [Desulfovibrio sp. ND132]
gi|323460628|gb|EGB16493.1| hypothetical protein DND132_3290 [Desulfovibrio desulfuricans
ND132]
Length=153
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/103 (36%), Positives = 51/103 (50%), Gaps = 6/103 (5%)
Query 72 HVFDGERTAELIGYTRGDGGFQWENAMGDLAIGVVGLMAY-----RFRGHFWLATIVVLT 126
H + + A IG+ G FQ E A +LA+GV G++A+ R FWLATI+ T
Sbjct 49 HYYKSDEVAAYIGWRPGSP-FQKEIAFTNLALGVCGVLAFFLRHSPLRDGFWLATILFAT 107
Query 127 IQYVGDAAGHIYYWVVENNTNPYNIGVPLWTDILLPIVMWALY 169
VG H V N P N G + DI +P+++W LY
Sbjct 108 CFLVGAFTVHARDLRVGGNKKPGNAGPVFFADIGMPVILWVLY 150
>gi|312140285|ref|YP_004007621.1| integral membrane protein [Rhodococcus equi 103S]
gi|311889624|emb|CBH48941.1| putative integral membrane protein [Rhodococcus equi 103S]
Length=176
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 51/90 (57%), Gaps = 5/90 (5%)
Query 77 ERTAELIGYTRGDGGFQWENAMGDLAIGVVGL-MAYRF-RGHFWLATIVVLTIQYVGDAA 134
+ A+ IGYT+ FQWE D+AIG G+ A++ RG + A + VL + + GD
Sbjct 62 DEIADGIGYTQSM--FQWEVGWADIAIGAAGVACAWKANRGGWMSAAVFVLLVSFWGDGI 119
Query 135 GHIYYWVVENNTNPYNIGVPLWTDILLPIV 164
GHI W +NT P N+ L TD LLP++
Sbjct 120 GHIMQWAAHDNTEPMNVWA-LPTDFLLPLI 148
>gi|325677057|ref|ZP_08156727.1| integral membrane protein [Rhodococcus equi ATCC 33707]
gi|325552128|gb|EGD21820.1| integral membrane protein [Rhodococcus equi ATCC 33707]
Length=176
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/90 (39%), Positives = 51/90 (57%), Gaps = 5/90 (5%)
Query 77 ERTAELIGYTRGDGGFQWENAMGDLAIGVVGL-MAYRFRGHFWLATIV-VLTIQYVGDAA 134
+ A+ IGYT+ FQWE D+AIG G+ A++ W++ +V VL + + GD
Sbjct 62 DEIADGIGYTQSM--FQWEVGWADIAIGAAGVACAWKANRGGWMSAVVFVLLVSFWGDGI 119
Query 135 GHIYYWVVENNTNPYNIGVPLWTDILLPIV 164
GHI W +NT P N+ L TD LLP++
Sbjct 120 GHIMQWAAHDNTEPMNVWA-LPTDFLLPLI 148
>gi|338175104|ref|YP_004651914.1| hypothetical protein PUV_11100 [Parachlamydia acanthamoebae UV7]
gi|336479462|emb|CCB86060.1| putative uncharacterized protein [Parachlamydia acanthamoebae
UV7]
Length=161
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/146 (30%), Positives = 74/146 (51%), Gaps = 6/146 (4%)
Query 23 MFTIVGVIVALIGAFV---QSRRHRHRPAADIHMLWWMVLIVGVVSIIGAGYHVFDGERT 79
M I ++ALI A V Q + + I + + +G + +IG H F + T
Sbjct 1 MLPIFLFVIALIYAIVKIFQDKVTTKKEQLAILLKSIIFFNIGCMGLIGFYAHTFMPDET 60
Query 80 AELIGYTRGDGGFQWENAMGDLAIGVVGLMAYRFRGHFWLATIVVLTIQYVGDAAGHIYY 139
A IG+ G+ FQ+E A+ +LA G++G+++ F FW+ T++ + G A GH
Sbjct 61 ARNIGWPTGNP-FQFEVAVANLAFGILGVLSPWFPSLFWVPTVLGSVVFLFGCAWGHFVQ 119
Query 140 WVVENNTNPYNIGVPLWT-DILLPIV 164
W + + PYN G +W D ++P++
Sbjct 120 W-GKGDVAPYNAGPFVWFGDGVIPLI 144
>gi|338739363|ref|YP_004676325.1| hypothetical protein HYPMC_2540 [Hyphomicrobium sp. MC1]
gi|337759926|emb|CCB65757.1| conserved membrane protein of unknown function [Hyphomicrobium
sp. MC1]
Length=169
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/154 (29%), Positives = 67/154 (44%), Gaps = 3/154 (1%)
Query 24 FTIVGVIVALIGAFVQSRRHRHRPAADIHMLWWMVLIVGVVSIIGAGYHVFDGERTAELI 83
F ++G++ +L S+ + + W + +GV H F G+ A+ I
Sbjct 17 FLVIGLLFSLAAIMRASKPVTAAVVVEKLISWHVFWAIGVCFFYNFVMHSFFGQMAAQFI 76
Query 84 GYTRGDGGFQWENAMGDLAIGVVGLMAYRFRGHFWLATIVVLTIQYVGDAAGHIYYWVVE 143
G+ D FQ+E L VVG +A LA IV + +G GHIY V +
Sbjct 77 GW--ADSPFQFEVGTASLGFSVVGFLAAFRSFDLRLAAIVGPALFALGAGFGHIYQIVTQ 134
Query 144 NNTNPYNIGVPLWTDILLPIVMWALYAWSWHSNG 177
+N P N GV + D L+P+ + L W H G
Sbjct 135 HNFAPGNAGVIFYLDFLIPLFGF-LLLWLQHRLG 167
>gi|268325224|emb|CBH38812.1| conserved hypothetical membrane protein [uncultured archaeon]
Length=165
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/147 (32%), Positives = 72/147 (49%), Gaps = 4/147 (2%)
Query 24 FTIVGVIVALIGAFVQSRRHRHRPAADI--HMLWWMVLIVGVVSIIGAGYHVFDGERTAE 81
F++V V+VA+I A V + + L+W V G+ + + Y ++ AE
Sbjct 13 FSVVFVLVAIIYATVNVLVYDVKAVEAFLGSFLFWCVGCQGIGACVLHWYRP-TADKIAE 71
Query 82 LIGYTRGDGGFQWENAMGDLAIGVVGLMAYRFRGHFWLATIVVLTIQYVGDAAGHIYYWV 141
IG+ G FQ E A A GV+G++ G FW AT + + + GH+ V
Sbjct 72 GIGWAPGSP-FQKEVAAAGGAFGVLGVLCGWIGGDFWTATAIGASFMFFLMGIGHVLDIV 130
Query 142 VENNTNPYNIGVPLWTDILLPIVMWAL 168
N + YN G L+TD+L+P+V+ AL
Sbjct 131 RNKNISIYNAGSVLYTDLLVPVVLIAL 157
>gi|197106380|ref|YP_002131757.1| hypothetical protein PHZ_c2919 [Phenylobacterium zucineum HLK1]
gi|196479800|gb|ACG79328.1| hypothetical protein PHZ_c2919 [Phenylobacterium zucineum HLK1]
Length=169
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/116 (32%), Positives = 52/116 (45%), Gaps = 2/116 (1%)
Query 55 WWMVLIVGVVSIIGAGYHVFDGERTAELIGYTRGDGGFQWENAMGDLAIGVVGLMAYRFR 114
W +++ VG+ HVF E A IG+ FQ E L V+G +A+R
Sbjct 47 WGLLVSVGIGFFYNFVMHVFFSETAAAFIGWETSP--FQKEVGFASLGFSVLGFLAFRGG 104
Query 115 GHFWLATIVVLTIQYVGDAAGHIYYWVVENNTNPYNIGVPLWTDILLPIVMWALYA 170
LA + + G AAGH+ V N P N G +TD+ LP+ +AL A
Sbjct 105 FEMRLAAVSGIACFLWGAAAGHVVQMVEARNFAPGNAGPIFYTDLFLPLAGFALLA 160
>gi|303246229|ref|ZP_07332509.1| hypothetical protein DesfrDRAFT_0984 [Desulfovibrio fructosovorans
JJ]
gi|302492292|gb|EFL52164.1| hypothetical protein DesfrDRAFT_0984 [Desulfovibrio fructosovorans
JJ]
Length=180
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/97 (35%), Positives = 48/97 (50%), Gaps = 3/97 (3%)
Query 74 FDGERTAELIGYTRGDGGFQWENAMGDLAIGVVGLMAYRFRGHFWLATIVVLTIQYVGDA 133
F ++ A IG+ FQ+E M + G+ G++ FR +W V + +G A
Sbjct 76 FFADKIAASIGWAPSP--FQFEVGMANFGFGLAGILVPFFRPGYWFGAAVGQCVFMLGAA 133
Query 134 AGHIYYWVVENNTNPYNIGVPLWTDILLPIVMWALYA 170
AGHI + N P N GV +TDIL P+ M L+A
Sbjct 134 AGHI-ASMRAGNFAPNNAGVIFYTDILGPVAMLVLFA 169
>gi|124023501|ref|YP_001017808.1| hypothetical protein P9303_18011 [Prochlorococcus marinus str.
MIT 9303]
gi|123963787|gb|ABM78543.1| Hypothetical protein P9303_18011 [Prochlorococcus marinus str.
MIT 9303]
Length=87
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/70 (38%), Positives = 43/70 (62%), Gaps = 1/70 (1%)
Query 97 AMGDLAIGVVGLMAY-RFRGHFWLATIVVLTIQYVGDAAGHIYYWVVENNTNPYNIGVPL 155
A +L IG++GL ++ R + +A+IV + D GH+Y VV++N P N+G L
Sbjct 2 AFANLTIGILGLSSFWRRSRDYLVASIVAYPSWFFADGLGHVYSLVVQSNDAPSNVGTIL 61
Query 156 WTDILLPIVM 165
+TD L+PI++
Sbjct 62 FTDFLMPILV 71
>gi|343925070|ref|ZP_08764602.1| hypothetical protein GOALK_033_00610 [Gordonia alkanivorans NBRC
16433]
gi|343765001|dbj|GAA11528.1| hypothetical protein GOALK_033_00610 [Gordonia alkanivorans NBRC
16433]
Length=186
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/156 (31%), Positives = 76/156 (49%), Gaps = 11/156 (7%)
Query 23 MFTIVGVIVALIGAFVQSRRHRHRPAADIH--MLWWMVLIVGVVSIIGAGYHVFDGERTA 80
+F + ++V I + R R R + +L W+++ GV ++ HV G A
Sbjct 5 LFQLALMVVGAIVHILVDRSARRRTTGRVAELVLLWILVPGGVFGVLAGVGHV--GPNAA 62
Query 81 EL---IGYTRGDGGFQWENAMGDLAIGVVGLMAYRFRGH-FWL-ATIVVLTIQYVGDAAG 135
EL IG G FQWE D+AIG++ ++ +R R WL A + L I Y GD AG
Sbjct 63 ELAKDIGPDYVPGMFQWELGWNDIAIGLLCVLTFRVRNRGGWLDAAVWALAISYGGDLAG 122
Query 136 HIYYWVVENNTNPYNI-GVPLWTDIL-LPIVMWALY 169
HI + + +N N +P I+ + ++ WA+Y
Sbjct 123 HISQYYLHDNHATNNAWAIPAEIYIVGVTVIAWAIY 158
>gi|326335464|ref|ZP_08201651.1| hypothetical protein HMPREF9071_1117 [Capnocytophaga sp. oral
taxon 338 str. F0234]
gi|325692230|gb|EGD34182.1| hypothetical protein HMPREF9071_1117 [Capnocytophaga sp. oral
taxon 338 str. F0234]
Length=149
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/108 (32%), Positives = 52/108 (49%), Gaps = 6/108 (5%)
Query 62 GVVSIIGAGYHVFDGERTAELIGYTRGDGGFQWENAMGDLAIGVVGLMAYRFRGHFWLAT 121
G+ + IG H E+ A IG+ GFQ E L IG+ G++ + R FW+AT
Sbjct 43 GIFNFIG---HTILSEKVARTIGWV--SNGFQKELGFVSLGIGICGILCHWVRDCFWIAT 97
Query 122 IVVLTIQYVGDAAGHIYYWVVENNTNPYNIGVPLWTDILLPIVMWALY 169
+ + +G HI +NN N N+ + L D L+PI + L+
Sbjct 98 AIPFCVFLIGAGILHIIEIKQKNNFNKGNVWIIL-PDFLMPITLIILF 144
>gi|298290799|ref|YP_003692738.1| hypothetical protein Snov_0791 [Starkeya novella DSM 506]
gi|296927310|gb|ADH88119.1| conserved hypothetical protein [Starkeya novella DSM 506]
Length=168
Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/110 (32%), Positives = 55/110 (50%), Gaps = 6/110 (5%)
Query 61 VGVVSIIGAGYHVFDGERTAELIGYTRGDGGFQWENAMGDLAIGVVGLMAYRFRGHFWLA 120
VG S++ YH+F + AE IG+ FQ+E + +LA+GVV + A+ F A
Sbjct 46 VGAASLLAGIYHLFFPQIAAESIGWQVSP--FQFEIGIANLALGVVAVAAFWRSRSFQAA 103
Query 121 TIVVLTIQYVGDAAGHIYYWVVENNTNPYNIGVPL----WTDILLPIVMW 166
+ G A GH+ VV ++ P N G+ L +LLP+++W
Sbjct 104 IAWCAALFCAGLAVGHVRDAVVAHDFAPNNFGLLLPVMAIQAVLLPVLVW 153
>gi|134098395|ref|YP_001104056.1| hypothetical protein SACE_1816 [Saccharopolyspora erythraea NRRL
2338]
gi|291006903|ref|ZP_06564876.1| hypothetical protein SeryN2_20478 [Saccharopolyspora erythraea
NRRL 2338]
gi|133911018|emb|CAM01131.1| hypothetical protein SACE_1816 [Saccharopolyspora erythraea NRRL
2338]
Length=164
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/155 (31%), Positives = 77/155 (50%), Gaps = 16/155 (10%)
Query 23 MFTIVGVIVALIGAFVQ---SRRH-RHRPAADIHMLWWMVLIVGVVSIIGAGYHVFDGER 78
M+ + ++VAL+G VQ RRH R D+ + W ++ VG+ ++GA H
Sbjct 1 MYMLFWLVVALVGFGVQYALRRRHDRSVSVPDLLLGWLLLSAVGLAGLLGAFAHTAFAAE 60
Query 79 TAELIGYTRGDGGFQWENAMGDLAIGVVGLMAYRFRGHFWLATI-----VVLTIQYVGDA 133
TA+ IG+ G+ FQ+E A+ +LA V+ L+ FW + +V I GDA
Sbjct 61 TAQGIGFPAGN-PFQYEVAVANLAFAVLALVG------FWNPDVRPVAGLVSGIWLGGDA 113
Query 134 AGHIYYWVVENNTNPYNIGVPLWTDILLPIVMWAL 168
H + V +NT P N G+ L + ++ + + L
Sbjct 114 IVHTHELVAHDNTAPNNAGLFLVIETVIALALLGL 148
>gi|269795412|ref|YP_003314867.1| hypothetical protein Sked_21130 [Sanguibacter keddieii DSM 10542]
gi|269097597|gb|ACZ22033.1| hypothetical protein Sked_21130 [Sanguibacter keddieii DSM 10542]
Length=175
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/108 (35%), Positives = 50/108 (47%), Gaps = 5/108 (4%)
Query 67 IGAG-YHVFDGERTAELIGYTRGDGGFQWENAMGDLAIGVVGLMAYRFRGHFWLATIVVL 125
IGAG H+F + IG+ R F+ E LA GV G++A +WLA I+
Sbjct 71 IGAGISHLFFSGAISRSIGFDRSP--FELEVGFAGLAFGVTGVLAGSHGTEYWLAIIIAS 128
Query 126 TIQYVGDAAGHIYYWVVENNTNPYNIGVPLWTDILLPIVMWALY-AWS 172
++ VG GH+ V N N + L D LLP + Y AWS
Sbjct 129 SVYRVGCGLGHVRSIVRSRNYAVNNTAI-LVIDFLLPAFLVVAYVAWS 175
>gi|256818876|ref|YP_003140155.1| hypothetical protein Coch_0028 [Capnocytophaga ochracea DSM 7271]
gi|256580459|gb|ACU91594.1| conserved hypothetical membrane spanning protein [Capnocytophaga
ochracea DSM 7271]
Length=147
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/84 (34%), Positives = 43/84 (52%), Gaps = 2/84 (2%)
Query 72 HVFDGERTAELIGYTRGDGGFQWENAMGDLAIGVVGLMAYRFRGHFWLATIVVLTIQYVG 131
H E+ A+ IG+ GFQ E L IG+ G++ + FR FWLAT + ++ +G
Sbjct 50 HSVLSEKVAKTIGWV--SNGFQKELGFVSLGIGICGILCHWFRDGFWLATAIPFSVFLIG 107
Query 132 DAAGHIYYWVVENNTNPYNIGVPL 155
A HI ++N N N+ + L
Sbjct 108 AALLHIAEMKRKHNFNKGNVWIIL 131
>gi|336115911|ref|YP_004570677.1| hypothetical protein MLP_02600 [Microlunatus phosphovorus NM-1]
gi|334683689|dbj|BAK33274.1| hypothetical protein MLP_02600 [Microlunatus phosphovorus NM-1]
Length=162
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/66 (38%), Positives = 41/66 (63%), Gaps = 2/66 (3%)
Query 62 GVVSIIGAGYHVFDGERTAELIGYTRGDGGFQWENAMGDLAIGVVGLMAYRFRGHFWLAT 121
G+++++G +V E+TA +G+ G FQ + L +GV+G+MA F+G+FW AT
Sbjct 44 GIIAVLGFIINVLIPEKTAAQLGWPGGP--FQVKYGFAQLGLGVMGVMAIWFQGNFWAAT 101
Query 122 IVVLTI 127
+V L I
Sbjct 102 LVTLYI 107
>gi|312864752|ref|ZP_07724983.1| conserved hypothetical protein [Streptococcus downei F0415]
gi|311099879|gb|EFQ58092.1| conserved hypothetical protein [Streptococcus downei F0415]
Length=136
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/94 (35%), Positives = 46/94 (49%), Gaps = 4/94 (4%)
Query 76 GERTAELIGYTRGDGGFQWENAMGDLAIGVVGLMA-YRFRGHFWLATIVVLTIQYVGDAA 134
ER A IG+T GFQ E + L IGV G+ G L ++VL+ +G
Sbjct 42 SERVARSIGWT--SNGFQKELGLITLGIGVSGVYCGLSNNGQNSLPLLIVLSFFLIGAGI 99
Query 135 GHIYYWVVENNTNPYNIGVPLWTDILLPIVMWAL 168
HI ++ +NTN N+ V + D L+PI + L
Sbjct 100 NHIRELIISHNTNAGNV-VIILPDFLIPITLLVL 132
>gi|338733298|ref|YP_004671771.1| hypothetical protein SNE_A14030 [Simkania negevensis Z]
gi|336482681|emb|CCB89280.1| putative uncharacterized protein [Simkania negevensis Z]
Length=153
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/139 (24%), Positives = 67/139 (49%), Gaps = 4/139 (2%)
Query 33 LIGAFVQ---SRRHRHRPAADIHMLWWMVLIVGVVSIIGAGYHVFDGERTAELIGYTRGD 89
IG F+ ++ R L W + G + + +VF E A+ +G+ +
Sbjct 2 FIGGFIHIVCLKKDRSAQNKLKMFLIWALTSAGAIGLEKFYANVFYPELYAKFLGWNP-N 60
Query 90 GGFQWENAMGDLAIGVVGLMAYRFRGHFWLATIVVLTIQYVGDAAGHIYYWVVENNTNPY 149
+Q+E ++ + I +G+++ FW+A+++ LTI+ G A GH ++ +
Sbjct 61 VAWQFEVSIINFIIATLGILSIWLHDLFWVASVITLTIRDWGIAIGHYLELILHYDVASG 120
Query 150 NIGVPLWTDILLPIVMWAL 168
N+G+ ++ +I PI+ AL
Sbjct 121 NVGLAVYIEIFHPIIAIAL 139
>gi|315224250|ref|ZP_07866089.1| conserved hypothetical protein [Capnocytophaga ochracea F0287]
gi|314945798|gb|EFS97808.1| conserved hypothetical protein [Capnocytophaga ochracea F0287]
Length=147
Score = 42.0 bits (97), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 27/84 (33%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query 72 HVFDGERTAELIGYTRGDGGFQWENAMGDLAIGVVGLMAYRFRGHFWLATIVVLTIQYVG 131
H E+ A+ IG+ GFQ E L IG+ G++ + FR FWLAT + ++ +G
Sbjct 50 HSVLSEKVAKTIGWV--SNGFQKELGFVSLGIGICGILCHWFRDGFWLATAIPFSVFLMG 107
Query 132 DAAGHIYYWVVENNTNPYNIGVPL 155
HI ++N N N+ + L
Sbjct 108 AVLLHIAEMKRKHNFNKGNVWIIL 131
>gi|158422072|ref|YP_001523364.1| hypothetical protein AZC_0448 [Azorhizobium caulinodans ORS 571]
gi|158328961|dbj|BAF86446.1| hypothetical protein [Azorhizobium caulinodans ORS 571]
Length=151
Score = 41.2 bits (95), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 37/123 (31%), Positives = 62/123 (51%), Gaps = 6/123 (4%)
Query 41 RRHRHRPAADI--HMLWWMVLI-VGVVSIIGAGYHVFDGERTAELIGYTRGDGGFQWENA 97
RR + R A + ++ +++L VG+V + A H+ + A IG+ FQ+E
Sbjct 12 RRTQTRTAGFVLERLIAYILLFPVGLVGLWAALGHIVFAAQAAASIGWAPSP--FQFEVG 69
Query 98 MGDLAIGVVGLMAYRFRGHFWLATIVVLTIQYVGDAA-GHIYYWVVENNTNPYNIGVPLW 156
+ +L IGV GL+ +R + + V+T ++G AA GH+ V N N G L+
Sbjct 70 VANLGIGVAGLIGVWYRNWGYRLAVAVMTGGFLGGAAVGHVVQIVSTGNLAAGNAGPILY 129
Query 157 TDI 159
TD+
Sbjct 130 TDV 132
>gi|297621121|ref|YP_003709258.1| conserved putative membrane protein [Waddlia chondrophila WSU
86-1044]
gi|297376422|gb|ADI38252.1| conserved putative membrane protein [Waddlia chondrophila WSU
86-1044]
gi|337293344|emb|CCB91333.1| Conserved putative membrane protein [Waddlia chondrophila 2032/99]
Length=150
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 30/114 (27%), Positives = 59/114 (52%), Gaps = 6/114 (5%)
Query 55 WWMVLIVGVVSIIGAGYHVFDGERTAELIGYTRGDGGFQWENAMGDLAIGVVGLMAYRFR 114
++M+L +G+ I + F E A+L G+ + FQ+ A L +G+ G++A++
Sbjct 34 YFMLLPIGLGGIWAFYLYAFHTELGAKLAGWNVCN--FQYSAAAAFLGLGINGIIAFKKG 91
Query 115 GHFWLATIVVLTIQYVGDAAGHIY--YWVVENNTNPYNIGVPLWTDILLPIVMW 166
F L+ I+ + + GD H Y Y++ E+ ++ N ++ D L+P +W
Sbjct 92 RDFRLSVILFASALFWGDLIAHFYQAYYIGESASS--NTAFIMYGDFLIPSALW 143
>gi|340350823|ref|ZP_08673797.1| hypothetical protein HMPREF9419_2029 [Prevotella nigrescens ATCC
33563]
gi|339607200|gb|EGQ12150.1| hypothetical protein HMPREF9419_2029 [Prevotella nigrescens ATCC
33563]
Length=228
Score = 39.7 bits (91), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 46/171 (27%), Positives = 73/171 (43%), Gaps = 16/171 (9%)
Query 23 MFTIVGVIVALIGAFVQSRRHRHRPAADIHMLWWMVLIVGVVSIIGAGYHVFDGERTAEL 82
+ I GV VAL + A+ + L M ++V V++++GA + T
Sbjct 59 LLRICGVAVALCSVVAWEQLRHALLKANHYWLQLMQIVVMVLTVLGAAVAIMPSGATQTA 118
Query 83 IGYTRGDGGFQWENAM---GDLAIGVVGL-----MAYRFRGHFWLATIVVLTIQYVGDAA 134
G T G +++ A+ D+AIGV L +A +F G L IV+ + +
Sbjct 119 AGATLLSGFGKFQMALPFYNDMAIGVASLCLGIGIARKFGGRIRLYGIVLAVLPVLSMLV 178
Query 135 GHIY---YWVVENNTNP----YNIGVPLWTDILLPIVMWALYAWSWHSNGD 178
G Y Y V T P Y + V L + + +V+W L S+ SN D
Sbjct 179 GEFYTYLYTSVGGLTLPELENYRV-VKLIVQLCIQVVLWVLLYRSFASNED 228
Lambda K H
0.326 0.143 0.481
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 174138591420
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40