BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1754c Length=563 Score E Sequences producing significant alignments: (Bits) Value gi|15608892|ref|NP_216270.1| hypothetical protein Rv1754c [Mycob... 1140 0.0 gi|121637662|ref|YP_977885.1| hypothetical protein BCG_1793c [My... 1138 0.0 gi|254364589|ref|ZP_04980635.1| conserved hypothetical protein [... 1108 0.0 gi|289745806|ref|ZP_06505184.1| conserved hypothetical protein [... 1106 0.0 gi|340626762|ref|YP_004745214.1| hypothetical protein MCAN_17681... 1039 0.0 gi|289554472|ref|ZP_06443682.1| conserved hypothetical protein [... 1036 0.0 gi|148822961|ref|YP_001287715.1| hypothetical protein TBFG_11772... 1009 0.0 gi|308369519|ref|ZP_07666747.1| hypothetical protein TMBG_00297 ... 915 0.0 gi|118618533|ref|YP_906865.1| hypothetical protein MUL_3174 [Myc... 706 0.0 gi|254550769|ref|ZP_05141216.1| hypothetical protein Mtube_09969... 692 0.0 gi|240169476|ref|ZP_04748135.1| hypothetical protein MkanA1_0919... 650 0.0 gi|289757865|ref|ZP_06517243.1| predicted protein [Mycobacterium... 645 0.0 gi|333989925|ref|YP_004522539.1| hypothetical protein JDM601_128... 619 5e-175 gi|289569813|ref|ZP_06450040.1| conserved hypothetical protein [... 603 3e-170 gi|41406945|ref|NP_959781.1| hypothetical protein MAP0847 [Mycob... 588 1e-165 gi|118466701|ref|YP_880291.1| hypothetical protein MAV_1035 [Myc... 588 1e-165 gi|296169674|ref|ZP_06851292.1| conserved hypothetical protein [... 574 2e-161 gi|254822969|ref|ZP_05227970.1| hypothetical protein MintA_23779... 571 1e-160 gi|342860523|ref|ZP_08717174.1| hypothetical protein MCOL_16651 ... 508 1e-141 gi|15828346|ref|NP_302609.1| hypothetical protein ML2491 [Mycoba... 499 5e-139 gi|169630535|ref|YP_001704184.1| hypothetical protein MAB_3454 [... 488 1e-135 gi|118469123|ref|YP_886464.1| hypothetical protein MSMEG_2107 [M... 484 2e-134 gi|333919107|ref|YP_004492688.1| hypothetical protein AS9A_1436 ... 378 1e-102 gi|118469648|ref|YP_888636.1| hypothetical protein MSMEG_4360 [M... 335 2e-89 gi|126435985|ref|YP_001071676.1| hypothetical protein Mjls_3407 ... 328 1e-87 gi|229491537|ref|ZP_04385358.1| conserved hypothetical protein [... 305 2e-80 gi|226308959|ref|YP_002768919.1| hypothetical protein RER_54720 ... 304 3e-80 gi|325048880|dbj|BAJ79307.1| hypothetical protein [Rhodococcus e... 304 3e-80 gi|333918903|ref|YP_004492484.1| hypothetical protein AS9A_1232 ... 301 2e-79 gi|226308967|ref|YP_002768927.1| hypothetical protein RER_54800 ... 300 6e-79 gi|229491489|ref|ZP_04385310.1| conserved hypothetical protein [... 294 3e-77 gi|108800362|ref|YP_640559.1| hypothetical protein Mmcs_3396 [My... 290 4e-76 gi|108797391|ref|YP_637588.1| hypothetical protein Mmcs_0411 [My... 289 1e-75 gi|120406128|ref|YP_955957.1| hypothetical protein Mvan_5180 [My... 288 1e-75 gi|226360708|ref|YP_002778486.1| hypothetical protein ROP_12940 ... 288 2e-75 gi|111018589|ref|YP_701561.1| hypothetical protein RHA1_ro01590 ... 286 7e-75 gi|229493990|ref|ZP_04387759.1| conserved hypothetical protein [... 283 4e-74 gi|226307332|ref|YP_002767292.1| hypothetical protein RER_38450 ... 283 7e-74 gi|343925444|ref|ZP_08764964.1| hypothetical protein GOALK_045_0... 282 1e-73 gi|315442606|ref|YP_004075485.1| hypothetical protein Mspyr1_096... 278 2e-72 gi|145222168|ref|YP_001132846.1| hypothetical protein Mflv_1576 ... 278 2e-72 gi|319950986|ref|ZP_08024857.1| hypothetical protein ES5_15248 [... 274 4e-71 gi|326383694|ref|ZP_08205379.1| hypothetical protein SCNU_12182 ... 273 7e-71 gi|312141404|ref|YP_004008740.1| hypothetical protein REQ_40930 ... 272 1e-70 gi|325673176|ref|ZP_08152869.1| carbohydrate-binding protein [Rh... 270 6e-70 gi|319950985|ref|ZP_08024856.1| hypothetical protein ES5_15243 [... 267 4e-69 gi|343925303|ref|ZP_08764828.1| hypothetical protein GOALK_040_0... 260 4e-67 gi|312140405|ref|YP_004007741.1| hypothetical protein REQ_30500 ... 259 7e-67 gi|262204393|ref|YP_003275601.1| hypothetical protein Gbro_4575 ... 259 8e-67 gi|325675985|ref|ZP_08155668.1| hypothetical protein HMPREF0724_... 257 4e-66 >gi|15608892|ref|NP_216270.1| hypothetical protein Rv1754c [Mycobacterium tuberculosis H37Rv] gi|15841219|ref|NP_336256.1| hypothetical protein MT1797 [Mycobacterium tuberculosis CDC1551] gi|31792942|ref|NP_855435.1| hypothetical protein Mb1783c [Mycobacterium bovis AF2122/97] 30 more sequence titles Length=563 Score = 1140 bits (2948), Expect = 0.0, Method: Compositional matrix adjust. Identities = 563/563 (100%), Positives = 563/563 (100%), Gaps = 0/563 (0%) Query 1 MYRYQVRVQQRRSEMNRWVATRSRRHTYQWITDHKSPRDHYRHISELRTSIATSSPGRCD 60 MYRYQVRVQQRRSEMNRWVATRSRRHTYQWITDHKSPRDHYRHISELRTSIATSSPGRCD Sbjct 1 MYRYQVRVQQRRSEMNRWVATRSRRHTYQWITDHKSPRDHYRHISELRTSIATSSPGRCD 60 Query 61 MSPIPRIVSVSLAWAAAIGLMVPIGLAPPAMAAPCSGDAANAPPPPSAIVTDPGATALGP 120 MSPIPRIVSVSLAWAAAIGLMVPIGLAPPAMAAPCSGDAANAPPPPSAIVTDPGATALGP Sbjct 61 MSPIPRIVSVSLAWAAAIGLMVPIGLAPPAMAAPCSGDAANAPPPPSAIVTDPGATALGP 120 Query 121 VRPGHGPIPTGRKPRGANDRAPLPKLGPLISALLNPGARNAAPLQQQALVPRANPGPNPA 180 VRPGHGPIPTGRKPRGANDRAPLPKLGPLISALLNPGARNAAPLQQQALVPRANPGPNPA Sbjct 121 VRPGHGPIPTGRKPRGANDRAPLPKLGPLISALLNPGARNAAPLQQQALVPRANPGPNPA 180 Query 181 PNPPATGPQPPNATQLTPNPAPAPDPAPAAAPDPGATLAGATTSLAEWVTGPDSPNKTLE 240 PNPPATGPQPPNATQLTPNPAPAPDPAPAAAPDPGATLAGATTSLAEWVTGPDSPNKTLE Sbjct 181 PNPPATGPQPPNATQLTPNPAPAPDPAPAAAPDPGATLAGATTSLAEWVTGPDSPNKTLE 240 Query 241 RFGISGTDLGIPWDNGDPANRQVLMIFGDTFGYCAVDGHQWRYNTLFRSQDRDLGNGVHV 300 RFGISGTDLGIPWDNGDPANRQVLMIFGDTFGYCAVDGHQWRYNTLFRSQDRDLGNGVHV Sbjct 241 RFGISGTDLGIPWDNGDPANRQVLMIFGDTFGYCAVDGHQWRYNTLFRSQDRDLGNGVHV 300 Query 301 TSGDASNRYSGSPVRQPGFSKQLINSIKWARDETGIIPTAGIAVGKTQYVNFMSIRNWGR 360 TSGDASNRYSGSPVRQPGFSKQLINSIKWARDETGIIPTAGIAVGKTQYVNFMSIRNWGR Sbjct 301 TSGDASNRYSGSPVRQPGFSKQLINSIKWARDETGIIPTAGIAVGKTQYVNFMSIRNWGR 360 Query 361 DGEWTTNYSGIAVSKDNGQTWGVFPGTIRASGPDSGGKARFVPGNENFQMGAYLKSNDGY 420 DGEWTTNYSGIAVSKDNGQTWGVFPGTIRASGPDSGGKARFVPGNENFQMGAYLKSNDGY Sbjct 361 DGEWTTNYSGIAVSKDNGQTWGVFPGTIRASGPDSGGKARFVPGNENFQMGAYLKSNDGY 420 Query 421 LYSFGTPPGRGGSAYLARVPQRFVPDLTKYQYWNGDSNSWVPNKPDAATPVIPGPVGEMS 480 LYSFGTPPGRGGSAYLARVPQRFVPDLTKYQYWNGDSNSWVPNKPDAATPVIPGPVGEMS Sbjct 421 LYSFGTPPGRGGSAYLARVPQRFVPDLTKYQYWNGDSNSWVPNKPDAATPVIPGPVGEMS 480 Query 481 VQYNTYLKQYLALYTNGMNDVVARTAPAPQGPWSAEQMLVSSWQMPGGIYAPMMHPWSTG 540 VQYNTYLKQYLALYTNGMNDVVARTAPAPQGPWSAEQMLVSSWQMPGGIYAPMMHPWSTG Sbjct 481 VQYNTYLKQYLALYTNGMNDVVARTAPAPQGPWSAEQMLVSSWQMPGGIYAPMMHPWSTG 540 Query 541 KDVYFNLSLWSAYNVMLMHTVLP 563 KDVYFNLSLWSAYNVMLMHTVLP Sbjct 541 KDVYFNLSLWSAYNVMLMHTVLP 563 >gi|121637662|ref|YP_977885.1| hypothetical protein BCG_1793c [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224990137|ref|YP_002644824.1| hypothetical protein JTY_1768 [Mycobacterium bovis BCG str. Tokyo 172] gi|121493309|emb|CAL71780.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224773250|dbj|BAH26056.1| hypothetical protein JTY_1768 [Mycobacterium bovis BCG str. Tokyo 172] gi|341601680|emb|CCC64353.1| conserved hypothetical protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=563 Score = 1138 bits (2943), Expect = 0.0, Method: Compositional matrix adjust. Identities = 562/563 (99%), Positives = 563/563 (100%), Gaps = 0/563 (0%) Query 1 MYRYQVRVQQRRSEMNRWVATRSRRHTYQWITDHKSPRDHYRHISELRTSIATSSPGRCD 60 MYRYQVRVQQRRSEMNRWVATRSRRHTYQWITDHKSPRDHYRHISELRTSIATSSPGRCD Sbjct 1 MYRYQVRVQQRRSEMNRWVATRSRRHTYQWITDHKSPRDHYRHISELRTSIATSSPGRCD 60 Query 61 MSPIPRIVSVSLAWAAAIGLMVPIGLAPPAMAAPCSGDAANAPPPPSAIVTDPGATALGP 120 MSPIPRIVSVSLAWAAAIGLMVPIGLAPPAMAAPCSGDAANAPPPPSAIVTDPGATALGP Sbjct 61 MSPIPRIVSVSLAWAAAIGLMVPIGLAPPAMAAPCSGDAANAPPPPSAIVTDPGATALGP 120 Query 121 VRPGHGPIPTGRKPRGANDRAPLPKLGPLISALLNPGARNAAPLQQQALVPRANPGPNPA 180 VRPGHGPIPTGRKPRGANDRAPLPKLGPLISALLNPGARNAAPLQQQALVPRANPGPNPA Sbjct 121 VRPGHGPIPTGRKPRGANDRAPLPKLGPLISALLNPGARNAAPLQQQALVPRANPGPNPA 180 Query 181 PNPPATGPQPPNATQLTPNPAPAPDPAPAAAPDPGATLAGATTSLAEWVTGPDSPNKTLE 240 PNPPATGPQPPNATQLTPNPAPAPDPAPAAAPDPGATLAGATTSLAEWVTGPDSPNKTLE Sbjct 181 PNPPATGPQPPNATQLTPNPAPAPDPAPAAAPDPGATLAGATTSLAEWVTGPDSPNKTLE 240 Query 241 RFGISGTDLGIPWDNGDPANRQVLMIFGDTFGYCAVDGHQWRYNTLFRSQDRDLGNGVHV 300 RFGISGTDLGIPWDNGDPANRQVLMIFGDTFGYCAVDGHQWRYNTLFRSQDRDLGNGVHV Sbjct 241 RFGISGTDLGIPWDNGDPANRQVLMIFGDTFGYCAVDGHQWRYNTLFRSQDRDLGNGVHV 300 Query 301 TSGDASNRYSGSPVRQPGFSKQLINSIKWARDETGIIPTAGIAVGKTQYVNFMSIRNWGR 360 TSGDASNRYSGSPVRQPGFSKQLINSIKWARDETGIIPTAGIAVGKTQYVNFMSIRNWGR Sbjct 301 TSGDASNRYSGSPVRQPGFSKQLINSIKWARDETGIIPTAGIAVGKTQYVNFMSIRNWGR 360 Query 361 DGEWTTNYSGIAVSKDNGQTWGVFPGTIRASGPDSGGKARFVPGNENFQMGAYLKSNDGY 420 DGEWTTNYSGIAVSKDNGQTWGVFPGTIRASGPDSGGKARFVPGNENFQMGAYLKSNDGY Sbjct 361 DGEWTTNYSGIAVSKDNGQTWGVFPGTIRASGPDSGGKARFVPGNENFQMGAYLKSNDGY 420 Query 421 LYSFGTPPGRGGSAYLARVPQRFVPDLTKYQYWNGDSNSWVPNKPDAATPVIPGPVGEMS 480 LYSFGTPPGRGGSAYLARVPQRFVPDLTKYQYWNGDSNSWVPNKPDAATPVIPGPVGEMS Sbjct 421 LYSFGTPPGRGGSAYLARVPQRFVPDLTKYQYWNGDSNSWVPNKPDAATPVIPGPVGEMS 480 Query 481 VQYNTYLKQYLALYTNGMNDVVARTAPAPQGPWSAEQMLVSSWQMPGGIYAPMMHPWSTG 540 VQYNTYLKQYLALYTNGMNDVVARTAPAPQGPWSAEQMLVSSWQMPGGIYAPMMHPWSTG Sbjct 481 VQYNTYLKQYLALYTNGMNDVVARTAPAPQGPWSAEQMLVSSWQMPGGIYAPMMHPWSTG 540 Query 541 KDVYFNLSLWSAYNVMLMHTVLP 563 KDVYF+LSLWSAYNVMLMHTVLP Sbjct 541 KDVYFSLSLWSAYNVMLMHTVLP 563 >gi|254364589|ref|ZP_04980635.1| conserved hypothetical protein [Mycobacterium tuberculosis str. Haarlem] gi|134150103|gb|EBA42148.1| conserved hypothetical protein [Mycobacterium tuberculosis str. Haarlem] Length=566 Score = 1108 bits (2867), Expect = 0.0, Method: Compositional matrix adjust. Identities = 548/548 (100%), Positives = 548/548 (100%), Gaps = 0/548 (0%) Query 16 NRWVATRSRRHTYQWITDHKSPRDHYRHISELRTSIATSSPGRCDMSPIPRIVSVSLAWA 75 NRWVATRSRRHTYQWITDHKSPRDHYRHISELRTSIATSSPGRCDMSPIPRIVSVSLAWA Sbjct 19 NRWVATRSRRHTYQWITDHKSPRDHYRHISELRTSIATSSPGRCDMSPIPRIVSVSLAWA 78 Query 76 AAIGLMVPIGLAPPAMAAPCSGDAANAPPPPSAIVTDPGATALGPVRPGHGPIPTGRKPR 135 AAIGLMVPIGLAPPAMAAPCSGDAANAPPPPSAIVTDPGATALGPVRPGHGPIPTGRKPR Sbjct 79 AAIGLMVPIGLAPPAMAAPCSGDAANAPPPPSAIVTDPGATALGPVRPGHGPIPTGRKPR 138 Query 136 GANDRAPLPKLGPLISALLNPGARNAAPLQQQALVPRANPGPNPAPNPPATGPQPPNATQ 195 GANDRAPLPKLGPLISALLNPGARNAAPLQQQALVPRANPGPNPAPNPPATGPQPPNATQ Sbjct 139 GANDRAPLPKLGPLISALLNPGARNAAPLQQQALVPRANPGPNPAPNPPATGPQPPNATQ 198 Query 196 LTPNPAPAPDPAPAAAPDPGATLAGATTSLAEWVTGPDSPNKTLERFGISGTDLGIPWDN 255 LTPNPAPAPDPAPAAAPDPGATLAGATTSLAEWVTGPDSPNKTLERFGISGTDLGIPWDN Sbjct 199 LTPNPAPAPDPAPAAAPDPGATLAGATTSLAEWVTGPDSPNKTLERFGISGTDLGIPWDN 258 Query 256 GDPANRQVLMIFGDTFGYCAVDGHQWRYNTLFRSQDRDLGNGVHVTSGDASNRYSGSPVR 315 GDPANRQVLMIFGDTFGYCAVDGHQWRYNTLFRSQDRDLGNGVHVTSGDASNRYSGSPVR Sbjct 259 GDPANRQVLMIFGDTFGYCAVDGHQWRYNTLFRSQDRDLGNGVHVTSGDASNRYSGSPVR 318 Query 316 QPGFSKQLINSIKWARDETGIIPTAGIAVGKTQYVNFMSIRNWGRDGEWTTNYSGIAVSK 375 QPGFSKQLINSIKWARDETGIIPTAGIAVGKTQYVNFMSIRNWGRDGEWTTNYSGIAVSK Sbjct 319 QPGFSKQLINSIKWARDETGIIPTAGIAVGKTQYVNFMSIRNWGRDGEWTTNYSGIAVSK 378 Query 376 DNGQTWGVFPGTIRASGPDSGGKARFVPGNENFQMGAYLKSNDGYLYSFGTPPGRGGSAY 435 DNGQTWGVFPGTIRASGPDSGGKARFVPGNENFQMGAYLKSNDGYLYSFGTPPGRGGSAY Sbjct 379 DNGQTWGVFPGTIRASGPDSGGKARFVPGNENFQMGAYLKSNDGYLYSFGTPPGRGGSAY 438 Query 436 LARVPQRFVPDLTKYQYWNGDSNSWVPNKPDAATPVIPGPVGEMSVQYNTYLKQYLALYT 495 LARVPQRFVPDLTKYQYWNGDSNSWVPNKPDAATPVIPGPVGEMSVQYNTYLKQYLALYT Sbjct 439 LARVPQRFVPDLTKYQYWNGDSNSWVPNKPDAATPVIPGPVGEMSVQYNTYLKQYLALYT 498 Query 496 NGMNDVVARTAPAPQGPWSAEQMLVSSWQMPGGIYAPMMHPWSTGKDVYFNLSLWSAYNV 555 NGMNDVVARTAPAPQGPWSAEQMLVSSWQMPGGIYAPMMHPWSTGKDVYFNLSLWSAYNV Sbjct 499 NGMNDVVARTAPAPQGPWSAEQMLVSSWQMPGGIYAPMMHPWSTGKDVYFNLSLWSAYNV 558 Query 556 MLMHTVLP 563 MLMHTVLP Sbjct 559 MLMHTVLP 566 >gi|289745806|ref|ZP_06505184.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] gi|289686334|gb|EFD53822.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] Length=549 Score = 1106 bits (2860), Expect = 0.0, Method: Compositional matrix adjust. Identities = 548/549 (99%), Positives = 548/549 (99%), Gaps = 0/549 (0%) Query 15 MNRWVATRSRRHTYQWITDHKSPRDHYRHISELRTSIATSSPGRCDMSPIPRIVSVSLAW 74 MNRWVATRSRRHTYQWITDHKSPRDHYRHISELRTSIATSSPGRC MSPIPRIVSVSLAW Sbjct 1 MNRWVATRSRRHTYQWITDHKSPRDHYRHISELRTSIATSSPGRCGMSPIPRIVSVSLAW 60 Query 75 AAAIGLMVPIGLAPPAMAAPCSGDAANAPPPPSAIVTDPGATALGPVRPGHGPIPTGRKP 134 AAAIGLMVPIGLAPPAMAAPCSGDAANAPPPPSAIVTDPGATALGPVRPGHGPIPTGRKP Sbjct 61 AAAIGLMVPIGLAPPAMAAPCSGDAANAPPPPSAIVTDPGATALGPVRPGHGPIPTGRKP 120 Query 135 RGANDRAPLPKLGPLISALLNPGARNAAPLQQQALVPRANPGPNPAPNPPATGPQPPNAT 194 RGANDRAPLPKLGPLISALLNPGARNAAPLQQQALVPRANPGPNPAPNPPATGPQPPNAT Sbjct 121 RGANDRAPLPKLGPLISALLNPGARNAAPLQQQALVPRANPGPNPAPNPPATGPQPPNAT 180 Query 195 QLTPNPAPAPDPAPAAAPDPGATLAGATTSLAEWVTGPDSPNKTLERFGISGTDLGIPWD 254 QLTPNPAPAPDPAPAAAPDPGATLAGATTSLAEWVTGPDSPNKTLERFGISGTDLGIPWD Sbjct 181 QLTPNPAPAPDPAPAAAPDPGATLAGATTSLAEWVTGPDSPNKTLERFGISGTDLGIPWD 240 Query 255 NGDPANRQVLMIFGDTFGYCAVDGHQWRYNTLFRSQDRDLGNGVHVTSGDASNRYSGSPV 314 NGDPANRQVLMIFGDTFGYCAVDGHQWRYNTLFRSQDRDLGNGVHVTSGDASNRYSGSPV Sbjct 241 NGDPANRQVLMIFGDTFGYCAVDGHQWRYNTLFRSQDRDLGNGVHVTSGDASNRYSGSPV 300 Query 315 RQPGFSKQLINSIKWARDETGIIPTAGIAVGKTQYVNFMSIRNWGRDGEWTTNYSGIAVS 374 RQPGFSKQLINSIKWARDETGIIPTAGIAVGKTQYVNFMSIRNWGRDGEWTTNYSGIAVS Sbjct 301 RQPGFSKQLINSIKWARDETGIIPTAGIAVGKTQYVNFMSIRNWGRDGEWTTNYSGIAVS 360 Query 375 KDNGQTWGVFPGTIRASGPDSGGKARFVPGNENFQMGAYLKSNDGYLYSFGTPPGRGGSA 434 KDNGQTWGVFPGTIRASGPDSGGKARFVPGNENFQMGAYLKSNDGYLYSFGTPPGRGGSA Sbjct 361 KDNGQTWGVFPGTIRASGPDSGGKARFVPGNENFQMGAYLKSNDGYLYSFGTPPGRGGSA 420 Query 435 YLARVPQRFVPDLTKYQYWNGDSNSWVPNKPDAATPVIPGPVGEMSVQYNTYLKQYLALY 494 YLARVPQRFVPDLTKYQYWNGDSNSWVPNKPDAATPVIPGPVGEMSVQYNTYLKQYLALY Sbjct 421 YLARVPQRFVPDLTKYQYWNGDSNSWVPNKPDAATPVIPGPVGEMSVQYNTYLKQYLALY 480 Query 495 TNGMNDVVARTAPAPQGPWSAEQMLVSSWQMPGGIYAPMMHPWSTGKDVYFNLSLWSAYN 554 TNGMNDVVARTAPAPQGPWSAEQMLVSSWQMPGGIYAPMMHPWSTGKDVYFNLSLWSAYN Sbjct 481 TNGMNDVVARTAPAPQGPWSAEQMLVSSWQMPGGIYAPMMHPWSTGKDVYFNLSLWSAYN 540 Query 555 VMLMHTVLP 563 VMLMHTVLP Sbjct 541 VMLMHTVLP 549 >gi|340626762|ref|YP_004745214.1| hypothetical protein MCAN_17681 [Mycobacterium canettii CIPT 140010059] gi|340004952|emb|CCC44100.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059] Length=565 Score = 1039 bits (2687), Expect = 0.0, Method: Compositional matrix adjust. Identities = 550/565 (98%), Positives = 554/565 (99%), Gaps = 2/565 (0%) Query 1 MYRYQVRVQQRRSEMNRWVATRSRRHTYQWITDHKSPRDHYRHISELRTSIATSSPGRCD 60 MY +VRVQQRRSEMNRWVATRSRRHTYQWITDHKSPRDHYRHISELRTSIATSSPGRCD Sbjct 1 MYPCRVRVQQRRSEMNRWVATRSRRHTYQWITDHKSPRDHYRHISELRTSIATSSPGRCD 60 Query 61 MSPIPRIVSVSLAWAAAIGLMVPIGLAPPAMAAPCSGDAANAPPPPSAIVTDPGATALGP 120 MSPIPRIVSVSLAWAAA+GLMVPIGLAPPAMAAPCSGDAANAPPPPSAIVTDPGATALGP Sbjct 61 MSPIPRIVSVSLAWAAAVGLMVPIGLAPPAMAAPCSGDAANAPPPPSAIVTDPGATALGP 120 Query 121 VRPGHGPIPTGRKPRGANDRAPLPKLGPLISALLNPGARNAAPLQQQALVPRANPGPNPA 180 VRPGHGPIPTGRKPRGAN+RAPLPKLGPLISALLNPGARNAAPLQQQALVPRANPGP+PA Sbjct 121 VRPGHGPIPTGRKPRGANERAPLPKLGPLISALLNPGARNAAPLQQQALVPRANPGPSPA 180 Query 181 PNPPATGPQPPNATQLTPNPAPAPDPAPAAAPDPGA--TLAGATTSLAEWVTGPDSPNKT 238 PNPPATGPQPPNATQLTPNPAPAP P PA A P TLAGATTSLAEWVTGPDSPNKT Sbjct 181 PNPPATGPQPPNATQLTPNPAPAPAPDPAPAAAPDPGATLAGATTSLAEWVTGPDSPNKT 240 Query 239 LERFGISGTDLGIPWDNGDPANRQVLMIFGDTFGYCAVDGHQWRYNTLFRSQDRDLGNGV 298 LERFGISGTDLGIPWDNGDPANRQVLMIFGDTFGYCAVDGHQWRYNTLFRSQDRDLGNGV Sbjct 241 LERFGISGTDLGIPWDNGDPANRQVLMIFGDTFGYCAVDGHQWRYNTLFRSQDRDLGNGV 300 Query 299 HVTSGDASNRYSGSPVRQPGFSKQLINSIKWARDETGIIPTAGIAVGKTQYVNFMSIRNW 358 HVTSGDASNRYSGSPVRQPGFSKQLINSIKWARDETGIIPTAGIAVGKTQYVNFMSIRNW Sbjct 301 HVTSGDASNRYSGSPVRQPGFSKQLINSIKWARDETGIIPTAGIAVGKTQYVNFMSIRNW 360 Query 359 GRDGEWTTNYSGIAVSKDNGQTWGVFPGTIRASGPDSGGKARFVPGNENFQMGAYLKSND 418 GRDGEWTTNYSGIAVSKDNGQTWGVFPGTIRASGPDSGGKARFVPGNENFQMGAYLKSND Sbjct 361 GRDGEWTTNYSGIAVSKDNGQTWGVFPGTIRASGPDSGGKARFVPGNENFQMGAYLKSND 420 Query 419 GYLYSFGTPPGRGGSAYLARVPQRFVPDLTKYQYWNGDSNSWVPNKPDAATPVIPGPVGE 478 GYLYSFGTPPGRGGSAYLARVPQRFVPDLTKYQYWNGDSNSWVPNKPDAATPVIPGPVGE Sbjct 421 GYLYSFGTPPGRGGSAYLARVPQRFVPDLTKYQYWNGDSNSWVPNKPDAATPVIPGPVGE 480 Query 479 MSVQYNTYLKQYLALYTNGMNDVVARTAPAPQGPWSAEQMLVSSWQMPGGIYAPMMHPWS 538 MSVQYNTYLKQYLALYTNGMNDVVARTAPAPQGPWSAEQMLVSSWQMPGGIYAPMMHPWS Sbjct 481 MSVQYNTYLKQYLALYTNGMNDVVARTAPAPQGPWSAEQMLVSSWQMPGGIYAPMMHPWS 540 Query 539 TGKDVYFNLSLWSAYNVMLMHTVLP 563 TGKDVYFNLSLWSAYNVMLMHTVLP Sbjct 541 TGKDVYFNLSLWSAYNVMLMHTVLP 565 >gi|289554472|ref|ZP_06443682.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605] gi|289439104|gb|EFD21597.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605] Length=517 Score = 1036 bits (2680), Expect = 0.0, Method: Compositional matrix adjust. Identities = 516/517 (99%), Positives = 517/517 (100%), Gaps = 0/517 (0%) Query 47 LRTSIATSSPGRCDMSPIPRIVSVSLAWAAAIGLMVPIGLAPPAMAAPCSGDAANAPPPP 106 +RTSIATSSPGRCDMSPIPRIVSVSLAWAAAIGLMVPIGLAPPAMAAPCSGDAANAPPPP Sbjct 1 MRTSIATSSPGRCDMSPIPRIVSVSLAWAAAIGLMVPIGLAPPAMAAPCSGDAANAPPPP 60 Query 107 SAIVTDPGATALGPVRPGHGPIPTGRKPRGANDRAPLPKLGPLISALLNPGARNAAPLQQ 166 SAIVTDPGATALGPVRPGHGPIPTGRKPRGANDRAPLPKLGPLISALLNPGARNAAPLQQ Sbjct 61 SAIVTDPGATALGPVRPGHGPIPTGRKPRGANDRAPLPKLGPLISALLNPGARNAAPLQQ 120 Query 167 QALVPRANPGPNPAPNPPATGPQPPNATQLTPNPAPAPDPAPAAAPDPGATLAGATTSLA 226 QALVPRANPGPNPAPNPPATGPQPPNATQLTPNPAPAPDPAPAAAPDPGATLAGATTSLA Sbjct 121 QALVPRANPGPNPAPNPPATGPQPPNATQLTPNPAPAPDPAPAAAPDPGATLAGATTSLA 180 Query 227 EWVTGPDSPNKTLERFGISGTDLGIPWDNGDPANRQVLMIFGDTFGYCAVDGHQWRYNTL 286 EWVTGPDSPNKTLERFGISGTDLGIPWDNGDPANRQVLMIFGDTFGYCAVDGHQWRYNTL Sbjct 181 EWVTGPDSPNKTLERFGISGTDLGIPWDNGDPANRQVLMIFGDTFGYCAVDGHQWRYNTL 240 Query 287 FRSQDRDLGNGVHVTSGDASNRYSGSPVRQPGFSKQLINSIKWARDETGIIPTAGIAVGK 346 FRSQDRDLGNGVHVTSGDASNRYSGSPVRQPGFSKQLINSIKWARDETGIIPTAGIAVGK Sbjct 241 FRSQDRDLGNGVHVTSGDASNRYSGSPVRQPGFSKQLINSIKWARDETGIIPTAGIAVGK 300 Query 347 TQYVNFMSIRNWGRDGEWTTNYSGIAVSKDNGQTWGVFPGTIRASGPDSGGKARFVPGNE 406 TQYVNFMSIRNWGRDGEWTTNYSGIAVSKDNGQTWGVFPGTIRASGPDSGGKARFVPGNE Sbjct 301 TQYVNFMSIRNWGRDGEWTTNYSGIAVSKDNGQTWGVFPGTIRASGPDSGGKARFVPGNE 360 Query 407 NFQMGAYLKSNDGYLYSFGTPPGRGGSAYLARVPQRFVPDLTKYQYWNGDSNSWVPNKPD 466 NFQMGAYLKSNDGYLYSFGTPPGRGGSAYLARVPQRFVPDLTKYQYWNGDSNSWVPNKPD Sbjct 361 NFQMGAYLKSNDGYLYSFGTPPGRGGSAYLARVPQRFVPDLTKYQYWNGDSNSWVPNKPD 420 Query 467 AATPVIPGPVGEMSVQYNTYLKQYLALYTNGMNDVVARTAPAPQGPWSAEQMLVSSWQMP 526 AATPVIPGPVGEMSVQYNTYLKQYLALYTNGMNDVVARTAPAPQGPWSAEQMLVSSWQMP Sbjct 421 AATPVIPGPVGEMSVQYNTYLKQYLALYTNGMNDVVARTAPAPQGPWSAEQMLVSSWQMP 480 Query 527 GGIYAPMMHPWSTGKDVYFNLSLWSAYNVMLMHTVLP 563 GGIYAPMMHPWSTGKDVYFNLSLWSAYNVMLMHTVLP Sbjct 481 GGIYAPMMHPWSTGKDVYFNLSLWSAYNVMLMHTVLP 517 >gi|148822961|ref|YP_001287715.1| hypothetical protein TBFG_11772 [Mycobacterium tuberculosis F11] gi|253799204|ref|YP_003032205.1| hypothetical protein TBMG_02241 [Mycobacterium tuberculosis KZN 1435] gi|289761913|ref|ZP_06521291.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] 9 more sequence titles Length=503 Score = 1009 bits (2608), Expect = 0.0, Method: Compositional matrix adjust. Identities = 503/503 (100%), Positives = 503/503 (100%), Gaps = 0/503 (0%) Query 61 MSPIPRIVSVSLAWAAAIGLMVPIGLAPPAMAAPCSGDAANAPPPPSAIVTDPGATALGP 120 MSPIPRIVSVSLAWAAAIGLMVPIGLAPPAMAAPCSGDAANAPPPPSAIVTDPGATALGP Sbjct 1 MSPIPRIVSVSLAWAAAIGLMVPIGLAPPAMAAPCSGDAANAPPPPSAIVTDPGATALGP 60 Query 121 VRPGHGPIPTGRKPRGANDRAPLPKLGPLISALLNPGARNAAPLQQQALVPRANPGPNPA 180 VRPGHGPIPTGRKPRGANDRAPLPKLGPLISALLNPGARNAAPLQQQALVPRANPGPNPA Sbjct 61 VRPGHGPIPTGRKPRGANDRAPLPKLGPLISALLNPGARNAAPLQQQALVPRANPGPNPA 120 Query 181 PNPPATGPQPPNATQLTPNPAPAPDPAPAAAPDPGATLAGATTSLAEWVTGPDSPNKTLE 240 PNPPATGPQPPNATQLTPNPAPAPDPAPAAAPDPGATLAGATTSLAEWVTGPDSPNKTLE Sbjct 121 PNPPATGPQPPNATQLTPNPAPAPDPAPAAAPDPGATLAGATTSLAEWVTGPDSPNKTLE 180 Query 241 RFGISGTDLGIPWDNGDPANRQVLMIFGDTFGYCAVDGHQWRYNTLFRSQDRDLGNGVHV 300 RFGISGTDLGIPWDNGDPANRQVLMIFGDTFGYCAVDGHQWRYNTLFRSQDRDLGNGVHV Sbjct 181 RFGISGTDLGIPWDNGDPANRQVLMIFGDTFGYCAVDGHQWRYNTLFRSQDRDLGNGVHV 240 Query 301 TSGDASNRYSGSPVRQPGFSKQLINSIKWARDETGIIPTAGIAVGKTQYVNFMSIRNWGR 360 TSGDASNRYSGSPVRQPGFSKQLINSIKWARDETGIIPTAGIAVGKTQYVNFMSIRNWGR Sbjct 241 TSGDASNRYSGSPVRQPGFSKQLINSIKWARDETGIIPTAGIAVGKTQYVNFMSIRNWGR 300 Query 361 DGEWTTNYSGIAVSKDNGQTWGVFPGTIRASGPDSGGKARFVPGNENFQMGAYLKSNDGY 420 DGEWTTNYSGIAVSKDNGQTWGVFPGTIRASGPDSGGKARFVPGNENFQMGAYLKSNDGY Sbjct 301 DGEWTTNYSGIAVSKDNGQTWGVFPGTIRASGPDSGGKARFVPGNENFQMGAYLKSNDGY 360 Query 421 LYSFGTPPGRGGSAYLARVPQRFVPDLTKYQYWNGDSNSWVPNKPDAATPVIPGPVGEMS 480 LYSFGTPPGRGGSAYLARVPQRFVPDLTKYQYWNGDSNSWVPNKPDAATPVIPGPVGEMS Sbjct 361 LYSFGTPPGRGGSAYLARVPQRFVPDLTKYQYWNGDSNSWVPNKPDAATPVIPGPVGEMS 420 Query 481 VQYNTYLKQYLALYTNGMNDVVARTAPAPQGPWSAEQMLVSSWQMPGGIYAPMMHPWSTG 540 VQYNTYLKQYLALYTNGMNDVVARTAPAPQGPWSAEQMLVSSWQMPGGIYAPMMHPWSTG Sbjct 421 VQYNTYLKQYLALYTNGMNDVVARTAPAPQGPWSAEQMLVSSWQMPGGIYAPMMHPWSTG 480 Query 541 KDVYFNLSLWSAYNVMLMHTVLP 563 KDVYFNLSLWSAYNVMLMHTVLP Sbjct 481 KDVYFNLSLWSAYNVMLMHTVLP 503 >gi|308369519|ref|ZP_07666747.1| hypothetical protein TMBG_00297 [Mycobacterium tuberculosis SUMu002] gi|308374396|ref|ZP_07667776.1| hypothetical protein TMFG_00841 [Mycobacterium tuberculosis SUMu006] gi|308376817|ref|ZP_07668360.1| hypothetical protein TMHG_00936 [Mycobacterium tuberculosis SUMu008] 11 more sequence titles Length=454 Score = 915 bits (2366), Expect = 0.0, Method: Compositional matrix adjust. Identities = 453/454 (99%), Positives = 454/454 (100%), Gaps = 0/454 (0%) Query 110 VTDPGATALGPVRPGHGPIPTGRKPRGANDRAPLPKLGPLISALLNPGARNAAPLQQQAL 169 +TDPGATALGPVRPGHGPIPTGRKPRGANDRAPLPKLGPLISALLNPGARNAAPLQQQAL Sbjct 1 MTDPGATALGPVRPGHGPIPTGRKPRGANDRAPLPKLGPLISALLNPGARNAAPLQQQAL 60 Query 170 VPRANPGPNPAPNPPATGPQPPNATQLTPNPAPAPDPAPAAAPDPGATLAGATTSLAEWV 229 VPRANPGPNPAPNPPATGPQPPNATQLTPNPAPAPDPAPAAAPDPGATLAGATTSLAEWV Sbjct 61 VPRANPGPNPAPNPPATGPQPPNATQLTPNPAPAPDPAPAAAPDPGATLAGATTSLAEWV 120 Query 230 TGPDSPNKTLERFGISGTDLGIPWDNGDPANRQVLMIFGDTFGYCAVDGHQWRYNTLFRS 289 TGPDSPNKTLERFGISGTDLGIPWDNGDPANRQVLMIFGDTFGYCAVDGHQWRYNTLFRS Sbjct 121 TGPDSPNKTLERFGISGTDLGIPWDNGDPANRQVLMIFGDTFGYCAVDGHQWRYNTLFRS 180 Query 290 QDRDLGNGVHVTSGDASNRYSGSPVRQPGFSKQLINSIKWARDETGIIPTAGIAVGKTQY 349 QDRDLGNGVHVTSGDASNRYSGSPVRQPGFSKQLINSIKWARDETGIIPTAGIAVGKTQY Sbjct 181 QDRDLGNGVHVTSGDASNRYSGSPVRQPGFSKQLINSIKWARDETGIIPTAGIAVGKTQY 240 Query 350 VNFMSIRNWGRDGEWTTNYSGIAVSKDNGQTWGVFPGTIRASGPDSGGKARFVPGNENFQ 409 VNFMSIRNWGRDGEWTTNYSGIAVSKDNGQTWGVFPGTIRASGPDSGGKARFVPGNENFQ Sbjct 241 VNFMSIRNWGRDGEWTTNYSGIAVSKDNGQTWGVFPGTIRASGPDSGGKARFVPGNENFQ 300 Query 410 MGAYLKSNDGYLYSFGTPPGRGGSAYLARVPQRFVPDLTKYQYWNGDSNSWVPNKPDAAT 469 MGAYLKSNDGYLYSFGTPPGRGGSAYLARVPQRFVPDLTKYQYWNGDSNSWVPNKPDAAT Sbjct 301 MGAYLKSNDGYLYSFGTPPGRGGSAYLARVPQRFVPDLTKYQYWNGDSNSWVPNKPDAAT 360 Query 470 PVIPGPVGEMSVQYNTYLKQYLALYTNGMNDVVARTAPAPQGPWSAEQMLVSSWQMPGGI 529 PVIPGPVGEMSVQYNTYLKQYLALYTNGMNDVVARTAPAPQGPWSAEQMLVSSWQMPGGI Sbjct 361 PVIPGPVGEMSVQYNTYLKQYLALYTNGMNDVVARTAPAPQGPWSAEQMLVSSWQMPGGI 420 Query 530 YAPMMHPWSTGKDVYFNLSLWSAYNVMLMHTVLP 563 YAPMMHPWSTGKDVYFNLSLWSAYNVMLMHTVLP Sbjct 421 YAPMMHPWSTGKDVYFNLSLWSAYNVMLMHTVLP 454 >gi|118618533|ref|YP_906865.1| hypothetical protein MUL_3174 [Mycobacterium ulcerans Agy99] gi|183982596|ref|YP_001850887.1| hypothetical protein MMAR_2586 [Mycobacterium marinum M] gi|118570643|gb|ABL05394.1| conserved secreted protein [Mycobacterium ulcerans Agy99] gi|183175922|gb|ACC41032.1| conserved secreted protein [Mycobacterium marinum M] Length=489 Score = 706 bits (1821), Expect = 0.0, Method: Compositional matrix adjust. Identities = 384/502 (77%), Positives = 411/502 (82%), Gaps = 14/502 (2%) Query 61 MSPIPRIVSVSLAWAAAIGLMVPIGLAPPAMAAPCSGDAANAPPPPSAIVTDPGATALGP 120 MS I R+VS+S+A AAA G + +GLAP A A PCSGDAANAPPP +A+VT P + LGP Sbjct 1 MSTIHRLVSLSVASAAAFGFIGAVGLAPMASAVPCSGDAANAPPPANAVVTAPSSKTLGP 60 Query 121 VRPGHGPIPTGRKPRGANDRAPLPKLGPLISALLNPGARNAAPLQQQALVPRANPGPNPA 180 + G +PRGAN+RAPLPKLGPL S LLNPGAR +AP+QQQA VP P Sbjct 61 -------MTRGLRPRGANERAPLPKLGPL-SRLLNPGARRSAPVQQQAAVPAPAPPNPAN 112 Query 181 PNPPATGPQPPNATQLTPNPAPAPDPAPAAAPDPGATLAGATTSLAEWVTGPDSPNKTLE 240 P AT P P D G L GATTSLAEWVTGPDSPNKTLE Sbjct 113 QAPNAT-----QIAPDAAPIPAPAPPPPPDGSDAGGALGGATTSLAEWVTGPDSPNKTLE 167 Query 241 RFGISGTDLGIPWDNGDPANRQVLMIFGDTFGYCAVDGHQWRYNTLFRSQDRDLGNGVHV 300 RFGISGTDLGI WDNGDPAN QVLM FGDTFGYCAV HQWRYNTLFRSQDR+L +G+HV Sbjct 168 RFGISGTDLGILWDNGDPANHQVLMAFGDTFGYCAVREHQWRYNTLFRSQDRNLADGLHV 227 Query 301 TSGDASNRYSGSPVRQPGFSKQLINSIKWARDETGIIPTAGIAVGKTQYVNFMSIRNWGR 360 T GD NRYSGSP+ QPGFSKQ+I+SIKWA DETGIIPT+GIAVGKTQYV+FMSIR+WGR Sbjct 228 TPGDPVNRYSGSPISQPGFSKQIISSIKWAPDETGIIPTSGIAVGKTQYVSFMSIRDWGR 287 Query 361 DGEWTTNYSGIAVSKDNGQTWGVFPGTIRASGPDSGGKARFVPGNENFQMGAYLKSNDGY 420 DGEWTTNYSGIAVSKDNGQ WGVFPGTIRASGPDS G+ RFVPGNENFQMGA++K+NDGY Sbjct 288 DGEWTTNYSGIAVSKDNGQNWGVFPGTIRASGPDS-GRVRFVPGNENFQMGAFVKANDGY 346 Query 421 LYSFGTPPGRGGSAYLARVPQRFVPDLTKYQYWNGDSNSWVPNKPDAATPVIPGPVGEMS 480 LYSFGTPPGRGGSAYLARVPQRFVPDLTKYQYWNGDSNSWV KP AATPVIPGPVGEMS Sbjct 347 LYSFGTPPGRGGSAYLARVPQRFVPDLTKYQYWNGDSNSWVAGKPGAATPVIPGPVGEMS 406 Query 481 VQYNTYLKQYLALYTNGMNDVVARTAPAPQGPWSAEQMLVSSWQMPGGIYAPMMHPWSTG 540 QYNTYLKQYL +YTNG NDVVARTAP PQGPWS EQMLVSSWQMPGGIYAPMMHPWSTG Sbjct 407 AQYNTYLKQYLVMYTNGGNDVVARTAPTPQGPWSPEQMLVSSWQMPGGIYAPMMHPWSTG 466 Query 541 KDVYFNLSLWSAYNVMLMHTVL 562 KDVYFNLSLWSAYNVMLMHT L Sbjct 467 KDVYFNLSLWSAYNVMLMHTEL 488 >gi|254550769|ref|ZP_05141216.1| hypothetical protein Mtube_09969 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|294996672|ref|ZP_06802363.1| hypothetical protein Mtub2_19738 [Mycobacterium tuberculosis 210] gi|297634311|ref|ZP_06952091.1| hypothetical protein MtubK4_09327 [Mycobacterium tuberculosis KZN 4207] gi|297731298|ref|ZP_06960416.1| hypothetical protein MtubKR_09417 [Mycobacterium tuberculosis KZN R506] gi|313658630|ref|ZP_07815510.1| hypothetical protein MtubKV_09432 [Mycobacterium tuberculosis KZN V2475] gi|339294706|gb|AEJ46817.1| hypothetical protein CCDC5079_1627 [Mycobacterium tuberculosis CCDC5079] gi|339298335|gb|AEJ50445.1| hypothetical protein CCDC5180_1608 [Mycobacterium tuberculosis CCDC5180] Length=335 Score = 692 bits (1785), Expect = 0.0, Method: Compositional matrix adjust. Identities = 334/335 (99%), Positives = 335/335 (100%), Gaps = 0/335 (0%) Query 229 VTGPDSPNKTLERFGISGTDLGIPWDNGDPANRQVLMIFGDTFGYCAVDGHQWRYNTLFR 288 +TGPDSPNKTLERFGISGTDLGIPWDNGDPANRQVLMIFGDTFGYCAVDGHQWRYNTLFR Sbjct 1 MTGPDSPNKTLERFGISGTDLGIPWDNGDPANRQVLMIFGDTFGYCAVDGHQWRYNTLFR 60 Query 289 SQDRDLGNGVHVTSGDASNRYSGSPVRQPGFSKQLINSIKWARDETGIIPTAGIAVGKTQ 348 SQDRDLGNGVHVTSGDASNRYSGSPVRQPGFSKQLINSIKWARDETGIIPTAGIAVGKTQ Sbjct 61 SQDRDLGNGVHVTSGDASNRYSGSPVRQPGFSKQLINSIKWARDETGIIPTAGIAVGKTQ 120 Query 349 YVNFMSIRNWGRDGEWTTNYSGIAVSKDNGQTWGVFPGTIRASGPDSGGKARFVPGNENF 408 YVNFMSIRNWGRDGEWTTNYSGIAVSKDNGQTWGVFPGTIRASGPDSGGKARFVPGNENF Sbjct 121 YVNFMSIRNWGRDGEWTTNYSGIAVSKDNGQTWGVFPGTIRASGPDSGGKARFVPGNENF 180 Query 409 QMGAYLKSNDGYLYSFGTPPGRGGSAYLARVPQRFVPDLTKYQYWNGDSNSWVPNKPDAA 468 QMGAYLKSNDGYLYSFGTPPGRGGSAYLARVPQRFVPDLTKYQYWNGDSNSWVPNKPDAA Sbjct 181 QMGAYLKSNDGYLYSFGTPPGRGGSAYLARVPQRFVPDLTKYQYWNGDSNSWVPNKPDAA 240 Query 469 TPVIPGPVGEMSVQYNTYLKQYLALYTNGMNDVVARTAPAPQGPWSAEQMLVSSWQMPGG 528 TPVIPGPVGEMSVQYNTYLKQYLALYTNGMNDVVARTAPAPQGPWSAEQMLVSSWQMPGG Sbjct 241 TPVIPGPVGEMSVQYNTYLKQYLALYTNGMNDVVARTAPAPQGPWSAEQMLVSSWQMPGG 300 Query 529 IYAPMMHPWSTGKDVYFNLSLWSAYNVMLMHTVLP 563 IYAPMMHPWSTGKDVYFNLSLWSAYNVMLMHTVLP Sbjct 301 IYAPMMHPWSTGKDVYFNLSLWSAYNVMLMHTVLP 335 >gi|240169476|ref|ZP_04748135.1| hypothetical protein MkanA1_09194 [Mycobacterium kansasii ATCC 12478] Length=372 Score = 650 bits (1676), Expect = 0.0, Method: Compositional matrix adjust. Identities = 311/348 (90%), Positives = 332/348 (96%), Gaps = 1/348 (0%) Query 215 GATLAGATTSLAEWVTGPDSPNKTLERFGISGTDLGIPWDNGDPANRQVLMIFGDTFGYC 274 GA L GATTSLAEWVTGPDSPNKTL++FGISGTDLGI WDNGDPAN QVLM FGDTFGYC Sbjct 25 GAALGGATTSLAEWVTGPDSPNKTLQQFGISGTDLGIIWDNGDPANHQVLMAFGDTFGYC 84 Query 275 AVDGHQWRYNTLFRSQDRDLGNGVHVTSGDASNRYSGSPVRQPGFSKQLINSIKWARDET 334 AV+ HQWRYNTLFRSQDRDLG+G+HV GDA+NRYSGSPVRQPGFSKQ+I+SIKWA +ET Sbjct 85 AVNEHQWRYNTLFRSQDRDLGDGIHVAPGDAANRYSGSPVRQPGFSKQIISSIKWAPNET 144 Query 335 GIIPTAGIAVGKTQYVNFMSIRNWGRDGEWTTNYSGIAVSKDNGQTWGVFPGTIRASGPD 394 GIIPT+G++VGKTQYV+FMSIR+WGRDGEWTTNYSGIAVSKDNGQ WGV+PGTIRASGPD Sbjct 145 GIIPTSGVSVGKTQYVSFMSIRDWGRDGEWTTNYSGIAVSKDNGQNWGVYPGTIRASGPD 204 Query 395 SGGKARFVPGNENFQMGAYLKSNDGYLYSFGTPPGRGGSAYLARVPQRFVPDLTKYQYWN 454 S G+ARFVPGNENFQMGA++KSNDGYLYSFGTPPGRGGSAYLARVPQ+FVPDL+KYQYWN Sbjct 205 S-GRARFVPGNENFQMGAFVKSNDGYLYSFGTPPGRGGSAYLARVPQQFVPDLSKYQYWN 263 Query 455 GDSNSWVPNKPDAATPVIPGPVGEMSVQYNTYLKQYLALYTNGMNDVVARTAPAPQGPWS 514 GDSNSWVP KPDAATPVIPGPVGEMS QYNTYLKQYL +YTNGMNDVVARTAPAPQGPWS Sbjct 264 GDSNSWVPGKPDAATPVIPGPVGEMSAQYNTYLKQYLVMYTNGMNDVVARTAPAPQGPWS 323 Query 515 AEQMLVSSWQMPGGIYAPMMHPWSTGKDVYFNLSLWSAYNVMLMHTVL 562 EQMLVSSWQMPGGIYAPMMHPWSTGKDVYFNLSLWSAYNVMLMHT L Sbjct 324 PEQMLVSSWQMPGGIYAPMMHPWSTGKDVYFNLSLWSAYNVMLMHTTL 371 >gi|289757865|ref|ZP_06517243.1| predicted protein [Mycobacterium tuberculosis T85] gi|289713429|gb|EFD77441.1| predicted protein [Mycobacterium tuberculosis T85] Length=437 Score = 645 bits (1664), Expect = 0.0, Method: Compositional matrix adjust. Identities = 323/323 (100%), Positives = 323/323 (100%), Gaps = 0/323 (0%) Query 61 MSPIPRIVSVSLAWAAAIGLMVPIGLAPPAMAAPCSGDAANAPPPPSAIVTDPGATALGP 120 MSPIPRIVSVSLAWAAAIGLMVPIGLAPPAMAAPCSGDAANAPPPPSAIVTDPGATALGP Sbjct 1 MSPIPRIVSVSLAWAAAIGLMVPIGLAPPAMAAPCSGDAANAPPPPSAIVTDPGATALGP 60 Query 121 VRPGHGPIPTGRKPRGANDRAPLPKLGPLISALLNPGARNAAPLQQQALVPRANPGPNPA 180 VRPGHGPIPTGRKPRGANDRAPLPKLGPLISALLNPGARNAAPLQQQALVPRANPGPNPA Sbjct 61 VRPGHGPIPTGRKPRGANDRAPLPKLGPLISALLNPGARNAAPLQQQALVPRANPGPNPA 120 Query 181 PNPPATGPQPPNATQLTPNPAPAPDPAPAAAPDPGATLAGATTSLAEWVTGPDSPNKTLE 240 PNPPATGPQPPNATQLTPNPAPAPDPAPAAAPDPGATLAGATTSLAEWVTGPDSPNKTLE Sbjct 121 PNPPATGPQPPNATQLTPNPAPAPDPAPAAAPDPGATLAGATTSLAEWVTGPDSPNKTLE 180 Query 241 RFGISGTDLGIPWDNGDPANRQVLMIFGDTFGYCAVDGHQWRYNTLFRSQDRDLGNGVHV 300 RFGISGTDLGIPWDNGDPANRQVLMIFGDTFGYCAVDGHQWRYNTLFRSQDRDLGNGVHV Sbjct 181 RFGISGTDLGIPWDNGDPANRQVLMIFGDTFGYCAVDGHQWRYNTLFRSQDRDLGNGVHV 240 Query 301 TSGDASNRYSGSPVRQPGFSKQLINSIKWARDETGIIPTAGIAVGKTQYVNFMSIRNWGR 360 TSGDASNRYSGSPVRQPGFSKQLINSIKWARDETGIIPTAGIAVGKTQYVNFMSIRNWGR Sbjct 241 TSGDASNRYSGSPVRQPGFSKQLINSIKWARDETGIIPTAGIAVGKTQYVNFMSIRNWGR 300 Query 361 DGEWTTNYSGIAVSKDNGQTWGV 383 DGEWTTNYSGIAVSKDNGQTWGV Sbjct 301 DGEWTTNYSGIAVSKDNGQTWGV 323 >gi|333989925|ref|YP_004522539.1| hypothetical protein JDM601_1285 [Mycobacterium sp. JDM601] gi|333485893|gb|AEF35285.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=479 Score = 619 bits (1596), Expect = 5e-175, Method: Compositional matrix adjust. Identities = 315/503 (63%), Positives = 379/503 (76%), Gaps = 26/503 (5%) Query 61 MSPIPRIVSVSLAWAAAIGLMVPIGLAPPAMAAPCSGDAANAPPPPSAIVTDPGATALGP 120 MS IVS ++ A A+G+++ APPA AA C+ AN PPP + T Sbjct 1 MSATRAIVSAAMVPAVALGMVLATEFAPPASAATCNAPEANIEPPPGSPTT--------- 51 Query 121 VRPGHGPIPTGRKPRGANDRAPLPKLGPLISALLNPGARNAAPLQQQALVPRANPGPNPA 180 G G +PTGR+PRG ND APLPKLGPLI+AL+NP N A QQ A+VP P P+ Sbjct 52 ---GAGQLPTGRRPRGTNDSAPLPKLGPLIAALINP---NGAIRQQAAVVP-----PVPS 100 Query 181 PNPPATGPQPPNATQ-LTPNPAPAPDPAPAAAPDPGATLAGATTSLAEWVTGPDSPNKTL 239 P+ G PNA Q + P P DP + A D +AG+ TSL EWVTGP+SPN+TL Sbjct 101 PD----GQVAPNAAQPVQPVPNAGADPGLSTA-DAAGAIAGSQTSLVEWVTGPNSPNQTL 155 Query 240 ERFGISGTDLGIPWDNGDPANRQVLMIFGDTFGYCAVDGHQWRYNTLFRSQDRDLGNGVH 299 +RFGISGTDLGIPWDNGDPANRQ+LM FGDTFGYC + GHQWR N LFR+QD +L +G+ Sbjct 156 QRFGISGTDLGIPWDNGDPANRQILMAFGDTFGYCRIPGHQWRQNVLFRTQDNNLADGIT 215 Query 300 VTSGDASNRYSGSPVRQPGFSKQLINSIKWARDETGIIPTAGIAVGKTQYVNFMSIRNWG 359 V G N+YSGSP+RQ FSKQ++ +++ A + G+IPTA I + QY++FMSI+ WG Sbjct 216 VGPGGIGNKYSGSPLRQANFSKQILPAVQLAPHQEGMIPTAAIGIAGNQYMSFMSIKQWG 275 Query 360 RDGEWTTNYSGIAVSKDNGQTWGVFPGTIRASGPDSGGKARFVPGNENFQMGAYLKSNDG 419 RDGEW+TNYS IAVS DNG+TWGV+PGT+R++ P++ +ARF+PGNENFQMGA+L+ DG Sbjct 276 RDGEWSTNYSAIAVSNDNGETWGVYPGTVRSTSPENVPRARFIPGNENFQMGAFLRGGDG 335 Query 420 YLYSFGTPPGRGGSAYLARVPQRFVPDLTKYQYWNGDSNSWVPNKPDAATPVIPGPVGEM 479 YLYS+GTP GRGGSAYLARVP+R +PDLT YQYWNGDS SWVPN P AATPVIPGPVGEM Sbjct 336 YLYSYGTPAGRGGSAYLARVPERTIPDLTTYQYWNGDSGSWVPNNPAAATPVIPGPVGEM 395 Query 480 SVQYNTYLKQYLALYTNGMNDVVARTAPAPQGPWSAEQMLVSSWQMPGGIYAPMMHPWST 539 SVQYNTYL+QYLALY NG NDVVARTAP PQGPWSAEQ L+ + Q+PGGIYAP +HPWST Sbjct 396 SVQYNTYLRQYLALYGNGGNDVVARTAPTPQGPWSAEQTLIPTGQIPGGIYAPYVHPWST 455 Query 540 GKDVYFNLSLWSAYNVMLMHTVL 562 GK+VYF LSLW+AY+VMLM TVL Sbjct 456 GKEVYFTLSLWNAYDVMLMRTVL 478 >gi|289569813|ref|ZP_06450040.1| conserved hypothetical protein [Mycobacterium tuberculosis T17] gi|289543567|gb|EFD47215.1| conserved hypothetical protein [Mycobacterium tuberculosis T17] Length=358 Score = 603 bits (1554), Expect = 3e-170, Method: Compositional matrix adjust. Identities = 347/350 (99%), Positives = 347/350 (99%), Gaps = 1/350 (0%) Query 1 MYRYQVRVQQRRSEMNRWVATRSRRHTYQWITDHKSPRDHYRHISELRTSIATSSPGRCD 60 MYRYQVRVQQRRSEMNRWVATRSRRHTYQWITDHKSPRDHYRHISELRTSIATSSPGRCD Sbjct 1 MYRYQVRVQQRRSEMNRWVATRSRRHTYQWITDHKSPRDHYRHISELRTSIATSSPGRCD 60 Query 61 MSPIPRIVSVSLAWAAAIGLMVPIGLAPPAMAAPCSGDAANAPPPPSAIVTDPGATALGP 120 MSPIPRIVSVSLAWAAAIGLMVPIGLAPPAMAAPCSGDAANAPPPPSAIVTDPGATALGP Sbjct 61 MSPIPRIVSVSLAWAAAIGLMVPIGLAPPAMAAPCSGDAANAPPPPSAIVTDPGATALGP 120 Query 121 VRPGHGPIPTGRKPRGANDRAPLPKLGPLISALLNPGARNAAPLQQQALVPRANPGPNPA 180 VRPGHGPIPTGRKPRGANDRAPLPKLGPLISALLNPGARNAAPLQQQALVPRANPGPNPA Sbjct 121 VRPGHGPIPTGRKPRGANDRAPLPKLGPLISALLNPGARNAAPLQQQALVPRANPGPNPA 180 Query 181 PNPPATGPQPPNATQLTPNPAPAPDPAPAAAPDPGATLAGATTSLAEWVTGPDSPNKTLE 240 PNPPATGPQPPNATQLTPNPAPAPDPAPAAAPDPGATLAGATTSLAEWVTGPDSPNKTLE Sbjct 181 PNPPATGPQPPNATQLTPNPAPAPDPAPAAAPDPGATLAGATTSLAEWVTGPDSPNKTLE 240 Query 241 RFGISGTDLGIPWDNGDPANRQVLMIFGDTFGYCAVDGHQWRYNTLFRSQDRDLGNGVHV 300 RFGISGTDLGIPWDNGDPANRQVLMIFGDTFGYCAVDGHQWRYNTLFRSQDRDLGNGVHV Sbjct 241 RFGISGTDLGIPWDNGDPANRQVLMIFGDTFGYCAVDGHQWRYNTLFRSQDRDLGNGVHV 300 Query 301 TSGDASNRYSGSPVRQPGFSKQLINSIKWARDETGIIPTAGIAVGKTQYV 350 TSGDASNRYSGSPVRQPGFSKQLINSIKWARDETGIIPTAGIAV QYV Sbjct 301 TSGDASNRYSGSPVRQPGFSKQLINSIKWARDETGIIPTAGIAVAN-QYV 349 >gi|41406945|ref|NP_959781.1| hypothetical protein MAP0847 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395295|gb|AAS03164.1| hypothetical protein MAP_0847 [Mycobacterium avium subsp. paratuberculosis K-10] Length=539 Score = 588 bits (1515), Expect = 1e-165, Method: Compositional matrix adjust. Identities = 327/531 (62%), Positives = 382/531 (72%), Gaps = 40/531 (7%) Query 58 RCDMSPIPRIVSVSLAWAAAIGLMVPIGLAPPAMAAPCSGDAANAPPPPSAIVTDPGATA 117 RC MS R VS+S+A AAA+G ++ +G AP A A PC P A V P A Sbjct 24 RCYMSAFLRSVSLSMASAAAVGFVLVVGPAPTANATPCGA--------PEANVDPPAAPP 75 Query 118 LGPVRPGHGPIPTGRKPRGANDRAPLPKLGPLISALLNP---GARNAAPLQQQALVPRAN 174 P PTGR+P ND+APLPKLGPLIS+LL P G + +AP+ PRA Sbjct 76 AMPAPQPVVQPPTGRRPTHTNDQAPLPKLGPLISSLLKPSAPGRQYSAPVH-----PRAE 130 Query 175 PGPNPAPNPPATGPQ-----------------PPNATQLTPNPAPAPDPAPAAAPDPGA- 216 GP P P+ P PQ PPNA QL PN AP P P P P PG Sbjct 131 -GPGPDPSAPMY-PQAEVLPPGPNPPTPGGAVPPNANQLRPNAAPMPQPQPQPQPAPGPP 188 Query 217 --TLAGATTSLAEWVTGPDSPNKTLERFGISGTDLGIPWDNGDPANRQVLMIFGDTFGYC 274 ++AGA TSL +WVTGP+ PNKTL+RF ISGTDLGI WDNGDPANRQVLM FGDTFGYC Sbjct 189 PPSIAGAPTSLVDWVTGPNGPNKTLQRFSISGTDLGIAWDNGDPANRQVLMAFGDTFGYC 248 Query 275 AVDGHQWRYNTLFRSQDRDLGNGVHVTSGDASNRYSGSPVRQPGFSKQLINSIKWARDET 334 V G QWRYNTLFRS D DL +G+H+ G ++RYSGSPV PG SKQ++N+I A ET Sbjct 249 KVHGQQWRYNTLFRSNDHDLSHGIHIADGVPNDRYSGSPVWAPGLSKQVVNTIHKAAHET 308 Query 335 GIIPTAGIAVGKTQYVNFMSIRNWGRDGEWTTNYSGIAVSKDNGQTWGVFPGTIRASGPD 394 GIIPT+G+++G+TQY+++MSIR WGRDGEW+TNYS IA S DNGQ WG+FP +IR + PD Sbjct 309 GIIPTSGMSMGRTQYMSYMSIRQWGRDGEWSTNYSAIARSTDNGQNWGIFPTSIRTASPD 368 Query 395 SGGKARFVPGNENFQMGAYLKSNDGYLYSFGTPPGRGGSAYLARVPQRFVPDLTKYQYWN 454 + A F PGNENFQMGA+LK NDGY+Y FGTP GRGG+A+L+RVP +PDLTKYQYWN Sbjct 369 AIPGAGFTPGNENFQMGAFLKGNDGYIYQFGTPSGRGGAAFLSRVPPNQLPDLTKYQYWN 428 Query 455 GDS-NSWVPNKPDAATPVIPGPVGEMSVQYNTYLKQYLALYTN-GMNDVVARTAPAPQGP 512 GD+ WV N P AATP+ PGPVGEMS QYN+YLKQYL LYT+ G NDVVARTAP PQGP Sbjct 429 GDNGGHWVANNPGAATPIFPGPVGEMSAQYNSYLKQYLVLYTDGGSNDVVARTAPTPQGP 488 Query 513 WSAEQMLVSSWQMPGGIYAPMMHPWSTGKDVYFNLSLWSAYNVMLMHTVLP 563 WS EQ LVSS+QMPGGIYAPM+HPWS+G+D+YFNLSLWSAY+VMLMHTVLP Sbjct 489 WSPEQPLVSSFQMPGGIYAPMIHPWSSGRDLYFNLSLWSAYDVMLMHTVLP 539 >gi|118466701|ref|YP_880291.1| hypothetical protein MAV_1035 [Mycobacterium avium 104] gi|254773922|ref|ZP_05215438.1| hypothetical protein MaviaA2_04497 [Mycobacterium avium subsp. avium ATCC 25291] gi|118167988|gb|ABK68885.1| conserved hypothetical protein [Mycobacterium avium 104] gi|336461273|gb|EGO40147.1| hypothetical protein MAPs_32180 [Mycobacterium avium subsp. paratuberculosis S397] Length=527 Score = 588 bits (1515), Expect = 1e-165, Method: Compositional matrix adjust. Identities = 327/531 (62%), Positives = 382/531 (72%), Gaps = 40/531 (7%) Query 58 RCDMSPIPRIVSVSLAWAAAIGLMVPIGLAPPAMAAPCSGDAANAPPPPSAIVTDPGATA 117 RC MS R VS+S+A AAA+G ++ +G AP A A PC P A V P A Sbjct 12 RCYMSAFLRSVSLSMASAAAVGFVLVVGPAPTANATPCGA--------PEANVDPPAAPP 63 Query 118 LGPVRPGHGPIPTGRKPRGANDRAPLPKLGPLISALLNP---GARNAAPLQQQALVPRAN 174 P PTGR+P ND+APLPKLGPLIS+LL P G + +AP+ PRA Sbjct 64 AMPAPQPVVQPPTGRRPTHTNDQAPLPKLGPLISSLLKPSAPGRQYSAPVH-----PRAE 118 Query 175 PGPNPAPNPPATGPQ-----------------PPNATQLTPNPAPAPDPAPAAAPDPGA- 216 GP P P+ P PQ PPNA QL PN AP P P P P PG Sbjct 119 -GPGPDPSAPMY-PQAEVLPPGPNPPTPGGAVPPNANQLRPNAAPMPQPQPQPQPAPGPP 176 Query 217 --TLAGATTSLAEWVTGPDSPNKTLERFGISGTDLGIPWDNGDPANRQVLMIFGDTFGYC 274 ++AGA TSL +WVTGP+ PNKTL+RF ISGTDLGI WDNGDPANRQVLM FGDTFGYC Sbjct 177 PPSIAGAPTSLVDWVTGPNGPNKTLQRFSISGTDLGIAWDNGDPANRQVLMAFGDTFGYC 236 Query 275 AVDGHQWRYNTLFRSQDRDLGNGVHVTSGDASNRYSGSPVRQPGFSKQLINSIKWARDET 334 V G QWRYNTLFRS D DL +G+H+ G ++RYSGSPV PG SKQ++N+I A ET Sbjct 237 KVHGQQWRYNTLFRSNDHDLSHGIHIADGVPNDRYSGSPVWAPGLSKQVVNTIHKAAHET 296 Query 335 GIIPTAGIAVGKTQYVNFMSIRNWGRDGEWTTNYSGIAVSKDNGQTWGVFPGTIRASGPD 394 GIIPT+G+++G+TQY+++MSIR WGRDGEW+TNYS IA S DNGQ WG+FP +IR + PD Sbjct 297 GIIPTSGMSMGRTQYMSYMSIRQWGRDGEWSTNYSAIARSTDNGQNWGIFPTSIRTASPD 356 Query 395 SGGKARFVPGNENFQMGAYLKSNDGYLYSFGTPPGRGGSAYLARVPQRFVPDLTKYQYWN 454 + A F PGNENFQMGA+LK NDGY+Y FGTP GRGG+A+L+RVP +PDLTKYQYWN Sbjct 357 AIPGAGFTPGNENFQMGAFLKGNDGYIYQFGTPSGRGGAAFLSRVPPNQLPDLTKYQYWN 416 Query 455 GDS-NSWVPNKPDAATPVIPGPVGEMSVQYNTYLKQYLALYTN-GMNDVVARTAPAPQGP 512 GD+ WV N P AATP+ PGPVGEMS QYN+YLKQYL LYT+ G NDVVARTAP PQGP Sbjct 417 GDNGGHWVANNPGAATPIFPGPVGEMSAQYNSYLKQYLVLYTDGGSNDVVARTAPTPQGP 476 Query 513 WSAEQMLVSSWQMPGGIYAPMMHPWSTGKDVYFNLSLWSAYNVMLMHTVLP 563 WS EQ LVSS+QMPGGIYAPM+HPWS+G+D+YFNLSLWSAY+VMLMHTVLP Sbjct 477 WSPEQPLVSSFQMPGGIYAPMIHPWSSGRDLYFNLSLWSAYDVMLMHTVLP 527 >gi|296169674|ref|ZP_06851292.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895671|gb|EFG75367.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=492 Score = 574 bits (1479), Expect = 2e-161, Method: Compositional matrix adjust. Identities = 323/506 (64%), Positives = 373/506 (74%), Gaps = 17/506 (3%) Query 61 MSPIPRIVSVSLAWAAAIGLMVPIGLAPPAMAAPCSGDAANAPPPPSAIVTDPGATALGP 120 MS I R +S+S+A AAA+GL+ +G AP A A PC P A V P A P Sbjct 1 MSAILRSLSLSMASAAAVGLVYVVGPAPSANATPCGA--------PEANVEPPAAPPAMP 52 Query 121 VRPGHGPIPTGRKPRGANDRAPLPKLGPLISALLNPGA-RNAAPLQQQALVPRANPGPNP 179 PTGR+P ND+APLPKLGPLIS+ L P R AAP++ P+A P Sbjct 53 APQPVVQPPTGRRPTHTNDQAPLPKLGPLISSFLKPAIPRQAAPMR-----PQAGVLPPG 107 Query 180 APNPPATGPQPPNATQLTPNPAPAPDPAPAAAPDPGATLAGATTSLAEWVTGPDSPNKTL 239 P PQPPNA QL PN AP P P PA AP ++AGA TSL +WVTGP+ PNKTL Sbjct 108 PNPPVPGLPQPPNAGQLQPNAAPVPQPQPAPAPP-PPSIAGAPTSLVDWVTGPEGPNKTL 166 Query 240 ERFGISGTDLGIPWDNGDPANRQVLMIFGDTFGYCAVDGHQWRYNTLFRSQDRDLGNGVH 299 +RF ISGTDLGI WDNGDP NRQVLM FGDTFGYC V G QWRYNTLFRS DRDL +G+H Sbjct 167 QRFSISGTDLGIAWDNGDPVNRQVLMAFGDTFGYCKVRGQQWRYNTLFRSSDRDLSHGIH 226 Query 300 VTSGDASNRYSGSPVRQPGFSKQLINSIKWARDETGIIPTAGIAVGKTQYVNFMSIRNWG 359 ++ G ++RYSGSPV P SKQ++N+I A ETGIIPTAGI++G+TQY+++MSIR WG Sbjct 227 ISDGIPNDRYSGSPVWAPSLSKQVVNTIHKAAHETGIIPTAGISIGRTQYMSYMSIRQWG 286 Query 360 RDGEWTTNYSGIAVSKDNGQTWGVFPGTIRASGPDSGGKARFVPGNENFQMGAYLKSNDG 419 RDGEW+TNYS IA S DNGQ WG+FP +IR + D+ A F PGNENFQMGA++K NDG Sbjct 287 RDGEWSTNYSAIARSNDNGQNWGIFPTSIRTASADAIPGAGFTPGNENFQMGAFMKGNDG 346 Query 420 YLYSFGTPPGRGGSAYLARVPQRFVPDLTKYQYWNGDSNS-WVPNKPDAATPVIPGPVGE 478 YLY FGTP GRGG+A+L+RVP +PDLTKYQYWNGD WVPN P AATP+ PGPVGE Sbjct 347 YLYQFGTPSGRGGAAFLSRVPPAQLPDLTKYQYWNGDEGGRWVPNNPGAATPIFPGPVGE 406 Query 479 MSVQYNTYLKQYLALYTN-GMNDVVARTAPAPQGPWSAEQMLVSSWQMPGGIYAPMMHPW 537 MS QYN YLKQYL LYTN G NDVVARTAP PQGPWS EQ LVSS+ MPGGIYAPM+HPW Sbjct 407 MSAQYNNYLKQYLVLYTNGGSNDVVARTAPTPQGPWSPEQPLVSSFSMPGGIYAPMIHPW 466 Query 538 STGKDVYFNLSLWSAYNVMLMHTVLP 563 S+G+D+YFNLSLWSAY+VMLMHTVLP Sbjct 467 SSGRDLYFNLSLWSAYDVMLMHTVLP 492 >gi|254822969|ref|ZP_05227970.1| hypothetical protein MintA_23779 [Mycobacterium intracellulare ATCC 13950] Length=498 Score = 571 bits (1472), Expect = 1e-160, Method: Compositional matrix adjust. Identities = 315/513 (62%), Positives = 364/513 (71%), Gaps = 36/513 (7%) Query 72 LAWAAAIGLMVPIGLAPPAMAAPCSGDAANAPPPPSAIVTDPGATALGPVRPGHGPIPTG 131 +A AAA+G ++ +G AP A A PC P A V P A P PTG Sbjct 1 MASAAAVGFVLVVGPAPTAHATPCGA--------PEANVDPPAAQPAMPAPQPVVQPPTG 52 Query 132 RKPRGANDRAPLPKLGPLISALLNP---GARNAAPLQQQALVPRANPGPNPAPNPPA--- 185 R+P ND+APLP+LGPLIS+LL P G R +AP+ PRA GP P P P A Sbjct 53 RRPSHTNDQAPLPRLGPLISSLLKPATPGQRYSAPVH-----PRAE-GPTPGPGPSAPLQ 106 Query 186 -------------TGPQPPNATQLTPNPAPAPDPAPAAAPDPGATLAGATTSLAEWVTGP 232 PQ PNA L PN AP P P P P ++AGA TSL +WVTGP Sbjct 107 QQAEVLPPAPNPPAVPQLPNANPLRPNAAPVPQPQPEPGPP-PPSIAGAPTSLVDWVTGP 165 Query 233 DSPNKTLERFGISGTDLGIPWDNGDPANRQVLMIFGDTFGYCAVDGHQWRYNTLFRSQDR 292 D PNKTL+RFGISGTDLGI WDNGDP NRQVLM FGDTFGYC V G QWRYNTLFRS DR Sbjct 166 DGPNKTLQRFGISGTDLGIAWDNGDPVNRQVLMAFGDTFGYCKVHGQQWRYNTLFRSNDR 225 Query 293 DLGNGVHVTSGDASNRYSGSPVRQPGFSKQLINSIKWARDETGIIPTAGIAVGKTQYVNF 352 DL G+H+ G +++YSGSPV PG SKQ++N+I A ETGIIPT +++G+TQY+++ Sbjct 226 DLSKGIHIADGVPNDKYSGSPVWAPGLSKQVVNTIHKAAHETGIIPTGAMSMGRTQYMSY 285 Query 353 MSIRNWGRDGEWTTNYSGIAVSKDNGQTWGVFPGTIRASGPDSGGKARFVPGNENFQMGA 412 MSIR WGRDGEWTTNYS IA S DNGQ WG+FP TIR + D+ A F PGNENFQMGA Sbjct 286 MSIRQWGRDGEWTTNYSAIARSNDNGQNWGIFPTTIRTASADAIPGAGFTPGNENFQMGA 345 Query 413 YLKSNDGYLYSFGTPPGRGGSAYLARVPQRFVPDLTKYQYWNGDSNS-WVPNKPDAATPV 471 +LK DGY+Y FGTP GRGG+A+L+RVP +PDLTKYQYWNGD WVPN P AATP+ Sbjct 346 FLKGKDGYIYQFGTPSGRGGAAFLSRVPPNQLPDLTKYQYWNGDEGGRWVPNNPGAATPI 405 Query 472 IPGPVGEMSVQYNTYLKQYLALYTN-GMNDVVARTAPAPQGPWSAEQMLVSSWQMPGGIY 530 P PVGEMS QYN+YLKQYL LYT+ G NDV+ARTAPAPQGPWS Q LVSS+QMPGGIY Sbjct 406 FPAPVGEMSAQYNSYLKQYLVLYTDGGSNDVIARTAPAPQGPWSPPQPLVSSFQMPGGIY 465 Query 531 APMMHPWSTGKDVYFNLSLWSAYNVMLMHTVLP 563 APM+HPWS+G+D+YFNLSLWSAY+VMLMHTVLP Sbjct 466 APMIHPWSSGRDLYFNLSLWSAYDVMLMHTVLP 498 >gi|342860523|ref|ZP_08717174.1| hypothetical protein MCOL_16651 [Mycobacterium colombiense CECT 3035] gi|342132178|gb|EGT85419.1| hypothetical protein MCOL_16651 [Mycobacterium colombiense CECT 3035] Length=337 Score = 508 bits (1308), Expect = 1e-141, Method: Compositional matrix adjust. Identities = 244/337 (73%), Positives = 280/337 (84%), Gaps = 2/337 (0%) Query 229 VTGPDSPNKTLERFGISGTDLGIPWDNGDPANRQVLMIFGDTFGYCAVDGHQWRYNTLFR 288 +TGP+ PNKTL+RF ISGTDLGI WDNGDP NRQVLM FGDTFGYC V G QWRYNTLFR Sbjct 1 MTGPNGPNKTLQRFSISGTDLGIAWDNGDPGNRQVLMAFGDTFGYCKVHGQQWRYNTLFR 60 Query 289 SQDRDLGNGVHVTSGDASNRYSGSPVRQPGFSKQLINSIKWARDETGIIPTAGIAVGKTQ 348 S D DL G+H+ G ++RYSGSPV PG SKQ++N+I A ETGIIPTA +++G+TQ Sbjct 61 SNDHDLSKGIHIADGVPNDRYSGSPVWAPGLSKQVVNTIHKAAHETGIIPTAAMSMGRTQ 120 Query 349 YVNFMSIRNWGRDGEWTTNYSGIAVSKDNGQTWGVFPGTIRASGPDSGGKARFVPGNENF 408 Y+++MSIR WGRDGEW+TNYS IA S DNGQ WG+FP TIR + PD+ A F PGNENF Sbjct 121 YMSYMSIRQWGRDGEWSTNYSAIARSNDNGQNWGIFPTTIRTASPDAIPGAGFTPGNENF 180 Query 409 QMGAYLKSNDGYLYSFGTPPGRGGSAYLARVPQRFVPDLTKYQYWNGDS-NSWVPNKPDA 467 QMGA+LK NDGYLY FGTP GRGG+A+L+RVP +PDLTKYQYWNGD+ WV N P A Sbjct 181 QMGAFLKGNDGYLYQFGTPSGRGGAAFLSRVPPNQLPDLTKYQYWNGDNGGHWVANNPGA 240 Query 468 ATPVIPGPVGEMSVQYNTYLKQYLALYTN-GMNDVVARTAPAPQGPWSAEQMLVSSWQMP 526 ATP+ PGPVGEMS QYN+YLKQYL LYT+ G NDVVARTAP PQGPWS EQ LVSS+QMP Sbjct 241 ATPIFPGPVGEMSAQYNSYLKQYLVLYTDGGSNDVVARTAPTPQGPWSPEQPLVSSFQMP 300 Query 527 GGIYAPMMHPWSTGKDVYFNLSLWSAYNVMLMHTVLP 563 GGIYAPM+HPWS+G+D+YFNLSLWSAY+VMLMHTVLP Sbjct 301 GGIYAPMIHPWSSGRDLYFNLSLWSAYDVMLMHTVLP 337 >gi|15828346|ref|NP_302609.1| hypothetical protein ML2491 [Mycobacterium leprae TN] gi|221230823|ref|YP_002504239.1| hypothetical protein MLBr_02491 [Mycobacterium leprae Br4923] gi|13094039|emb|CAC32008.1| hypothetical protein [Mycobacterium leprae] gi|219933930|emb|CAR72590.1| hypothetical protein MLBr02491 [Mycobacterium leprae Br4923] Length=333 Score = 499 bits (1285), Expect = 5e-139, Method: Compositional matrix adjust. Identities = 238/336 (71%), Positives = 281/336 (84%), Gaps = 4/336 (1%) Query 229 VTGPDSPNKTLERFGISGTDLGIPWDNGDPANRQVLMIFGDTFGYCAVDGHQWRYNTLFR 288 +TGP+SPNKTL+RFGISGTDLGIPWDNGDP N QVLM FGD+FGYC+V G Q RYN LFR Sbjct 1 MTGPNSPNKTLQRFGISGTDLGIPWDNGDPTNHQVLMAFGDSFGYCSVKGQQRRYNILFR 60 Query 289 SQDRDLGNGVHVTSGDASNRYSGSPVRQPGFSKQLINSIKWARDETGIIPTAGIAVGKTQ 348 S ++DL +G+ + G +++YSGSPV G +KQ++N+I A ETGIIPT I++GKTQ Sbjct 61 SSNQDLSHGIRIADGVPNDKYSGSPVWTTGLAKQVVNTIHRAPHETGIIPTTAISIGKTQ 120 Query 349 YVNFMSIRNWGRDGEWTTNYSGIAVSKDNGQTWGVFPGTIRASGPDSGGKARFVPGNENF 408 Y+N+MSI+ WGRDGEWTTNYS IA S DNGQ+WG +PGTIR + PD+ FVPGN+NF Sbjct 121 YMNYMSIKKWGRDGEWTTNYSAIARSIDNGQSWGTYPGTIRTASPDAIPGTHFVPGNQNF 180 Query 409 QMGAYLKSNDGYLYSFGTPPGRGGSAYLARVPQRFVPDLTKYQYWNGDSNSWVPNKPDAA 468 QMGA+++ NDGYLYSFGTP GR G+AYLARVPQ VPDL+KYQYWNG+ WVPN P AA Sbjct 181 QMGAFMRGNDGYLYSFGTPSGRSGAAYLARVPQNLVPDLSKYQYWNGN---WVPNNPGAA 237 Query 469 TPVIPGPVGEMSVQYNTYLKQYLALYTNG-MNDVVARTAPAPQGPWSAEQMLVSSWQMPG 527 TP+ GPVGEMS QYN YLKQY+ LY+NG NDVVARTAPAPQGPWS EQ LVSS+QMPG Sbjct 238 TPLFSGPVGEMSAQYNDYLKQYIILYSNGDSNDVVARTAPAPQGPWSPEQPLVSSFQMPG 297 Query 528 GIYAPMMHPWSTGKDVYFNLSLWSAYNVMLMHTVLP 563 GIYAPM+HPWS+G+D+YFNLSLWSAY+V+LMHTVLP Sbjct 298 GIYAPMIHPWSSGRDLYFNLSLWSAYDVVLMHTVLP 333 >gi|169630535|ref|YP_001704184.1| hypothetical protein MAB_3454 [Mycobacterium abscessus ATCC 19977] gi|169242502|emb|CAM63530.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=488 Score = 488 bits (1255), Expect = 1e-135, Method: Compositional matrix adjust. Identities = 268/500 (54%), Positives = 327/500 (66%), Gaps = 18/500 (3%) Query 66 RIVSVSLAWAAAIGLMVPIGLAPPAMAAPCSGDAANAPPPPSAIVTDPGATALGPVRPGH 125 R +SV L +A IG V + +AP A A PC+G AA PP V D G PG Sbjct 5 RRISVVLMTSAVIGSSVAVDVAPVAYADPCAGPAAGLQPP--TPVPDDGI-------PGQ 55 Query 126 GPIPTGRKPRGANDRAPLPKLGPLISALLNPGARNAAPLQQQALVPR-ANPGPNPA-PNP 183 P P GR+P GAND+APLP+LG L A+L + P Q P A PA PNP Sbjct 56 AP-PIGRRPAGANDKAPLPELGKLPLAIL----KQVLPQQSAKKKPGWAQELARPALPNP 110 Query 184 PATGPQPPNATQLTPNPAPAPDPAPAAAPDPGATLAGATTSLAEWVTGPDSPNKTLERFG 243 P P PN Q A AP P A TTS+ WVTG D+ TL++F Sbjct 111 PE--PGSPNNLQDQQAAAVAPAPPAPAVGPAADAAVSPTTSVVGWVTGVDTGANTLQKFS 168 Query 244 ISGTDLGIPWDNGDPANRQVLMIFGDTFGYCAVDGHQWRYNTLFRSQDRDLGNGVHVTSG 303 ISGTDLGI WDNGD A RQVLM FGDT+GYC + QWRYNTL R+QD+ L G+ V G Sbjct 169 ISGTDLGIMWDNGDNAGRQVLMAFGDTYGYCGMKSQQWRYNTLLRTQDKSLSRGLAVAEG 228 Query 304 DASNRYSGSPVRQPGFSKQLINSIKWARDETGIIPTAGIAVGKTQYVNFMSIRNWGRDGE 363 +N Y+GSP +PG+SKQ+I IKWA E GIIPTA I+VG+TQY+N+MSI++W GE Sbjct 229 STTNPYAGSPQSRPGYSKQIIPPIKWAAQERGIIPTAAISVGRTQYMNYMSIKSWDSAGE 288 Query 364 WTTNYSGIAVSKDNGQTWGVFPGTIRASGPDSGGKARFVPGNENFQMGAYLKSNDGYLYS 423 WTTNYS AVS DNGQ W FP +IR + PD+ + F PGNENFQ AY+K NDGY+Y Sbjct 289 WTTNYSATAVSNDNGQNWKTFPQSIRPASPDAISQVPFTPGNENFQQAAYVKGNDGYIYI 348 Query 424 FGTPPGRGGSAYLARVPQRFVPDLTKYQYWNGDSNSWVPNKPDAATPVIPGPVGEMSVQY 483 FGTP GR GS +++R +PD K+++WN D +WVP P+AATP++ GPVGEMS QY Sbjct 349 FGTPSGRSGSGFVSRALPGNLPDAAKHEFWNTDRGTWVPGDPNAATPILSGPVGEMSAQY 408 Query 484 NTYLKQYLALYTNGMNDVVARTAPAPQGPWSAEQMLVSSWQMPGGIYAPMMHPWSTGKDV 543 NTYLK+YL +Y + DV+ T+PAPQGPWS Q++V+ QMPGG YAP +HPW+TGK++ Sbjct 409 NTYLKKYLVMYGDKSGDVLLSTSPAPQGPWSPPQIIVTESQMPGGPYAPYLHPWTTGKEL 468 Query 544 YFNLSLWSAYNVMLMHTVLP 563 YFNLSLWSAYNVMLM T LP Sbjct 469 YFNLSLWSAYNVMLMRTTLP 488 >gi|118469123|ref|YP_886464.1| hypothetical protein MSMEG_2107 [Mycobacterium smegmatis str. MC2 155] gi|118170410|gb|ABK71306.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=486 Score = 484 bits (1246), Expect = 2e-134, Method: Compositional matrix adjust. Identities = 235/343 (69%), Positives = 268/343 (79%), Gaps = 2/343 (0%) Query 223 TSLAEWVTGPDSPNKTLERFGISGTDLGIPWDNGDPANRQVLMIFGDTFGYCAVDGHQWR 282 T+L WVTGP+SPN T +F I+GTDLGI WDNG+P RQVLM FGDT+GYC V G QWR Sbjct 144 TTLVGWVTGPESPNDTARKFAITGTDLGIMWDNGNPGARQVLMAFGDTYGYCGVRGQQWR 203 Query 283 YNTLFRSQDRDLGNGVHVTSGDASNRYSGSPVRQPGFSKQLINSIKWARDETGIIPTAGI 342 YN LFRSQD L N + V +G N++SGSPV PG SKQ+INS KWA E GIIPTAG+ Sbjct 204 YNVLFRSQDGALSNTIAVPNGVPRNKFSGSPVWAPGISKQIINSTKWAATEKGIIPTAGV 263 Query 343 AVGKTQYVNFMSIRNWGRDGEWTTNYSGIAVSKDNGQTWGVFPGTIRASGPDSGGKARFV 402 AVG+TQY+NFMSIRNW DG W+TNYS IAVS DNG+ WGV+PGT+R AR+V Sbjct 264 AVGQTQYLNFMSIRNWDSDGRWSTNYSAIAVSPDNGENWGVYPGTVRTPADGVVSGARYV 323 Query 403 PGNENFQMGAYLKSNDG--YLYSFGTPPGRGGSAYLARVPQRFVPDLTKYQYWNGDSNSW 460 GNENFQ GA+LK G YLY+FGTP GRGG+AY+ARV VPDL +Y+YWN ++NSW Sbjct 324 RGNENFQQGAFLKPGPGDPYLYTFGTPSGRGGAAYIARVAPGAVPDLNRYEYWNSNTNSW 383 Query 461 VPNKPDAATPVIPGPVGEMSVQYNTYLKQYLALYTNGMNDVVARTAPAPQGPWSAEQMLV 520 VP P AATPVIPGPVGE+S QYNTYLKQY+ LY NG NDVV RTA APQGPW EQ+LV Sbjct 384 VPRDPGAATPVIPGPVGELSAQYNTYLKQYVVLYCNGANDVVMRTAQAPQGPWGPEQLLV 443 Query 521 SSWQMPGGIYAPMMHPWSTGKDVYFNLSLWSAYNVMLMHTVLP 563 S Q PGGIYAP +HPWSTGK++YFNLSLWSAYNVMLM TVLP Sbjct 444 PSTQYPGGIYAPFLHPWSTGKELYFNLSLWSAYNVMLMRTVLP 486 >gi|333919107|ref|YP_004492688.1| hypothetical protein AS9A_1436 [Amycolicicoccus subflavus DQS3-9A1] gi|333481328|gb|AEF39888.1| hypothetical protein AS9A_1436 [Amycolicicoccus subflavus DQS3-9A1] Length=455 Score = 378 bits (971), Expect = 1e-102, Method: Compositional matrix adjust. Identities = 193/346 (56%), Positives = 245/346 (71%), Gaps = 10/346 (2%) Query 224 SLAEWVTGPDSPNKTLERFGISGTDLGIPWDNGDP-ANRQVLMIFGDTFGYCAVDGHQWR 282 SL +TGP S N T+ERFGISGTDLGI WDNG A RQVL+ +GDTFG C++ G++WR Sbjct 84 SLVGMLTGPRSDNATVERFGISGTDLGIMWDNGGSGAERQVLIAYGDTFGDCSLPGNEWR 143 Query 283 YNTLFRSQDRDLGNGVHV----TSGDASNRYSGSPVR--QPGFSKQLINSIKWARDETGI 336 YNTL RS D L +G+ V T DA GSPV +P FSKQ+I+S++ A E + Sbjct 144 YNTLMRSGDTTLSDGMSVPDPLTEEDADYLQGGSPVTVDRPNFSKQIIDSLELAPTEITV 203 Query 337 IPTAGIAVGKTQYVNFMSIRNWGRDGEWTTNYSGIAVSKDNGQTWGVFPGTIRASGPDSG 396 IPTAGI+VG TQY+NFMS+R WG G+WTTN+S IAVS+DNG+ W V PGTIR + Sbjct 204 IPTAGISVGTTQYINFMSVRQWGTPGQWTTNFSAIAVSEDNGENWEVDPGTIRFNQNSGI 263 Query 397 GKARFVPGNENFQMGAYLKSNDGYLYSFGTPPGRGGSAYLARVPQRFVPDLTKYQYWNGD 456 A F+ GN+NFQM AY+K DGY+Y+FGTP GR G+A +ARV + + +L KY YWNG Sbjct 264 SGATFIAGNQNFQMTAYVK-RDGYVYTFGTPSGRSGAARVARVLEEEILELQKYDYWNG- 321 Query 457 SNSWVPNKPDAATPVIPGPVGEMSVQYNTYLKQYLALYTNGMNDVVARTAPAPQGPWSAE 516 +SWV P AA+ VI PV EMSVQ+N YL +Y+A+YTNG+ VV RTA PQGPWS+ Sbjct 322 -SSWVNADPGAASNVIGAPVSEMSVQWNDYLGKYIAMYTNGVGSVVMRTASQPQGPWSSA 380 Query 517 QMLVSSWQMPGGIYAPMMHPWSTGKDVYFNLSLWSAYNVMLMHTVL 562 Q ++++ PGG+YAP +HPWS+G +YF +S WS YNV+ M T L Sbjct 381 QTIMTAAAWPGGLYAPYIHPWSSGNQLYFTVSRWSDYNVLFMRTTL 426 >gi|118469648|ref|YP_888636.1| hypothetical protein MSMEG_4360 [Mycobacterium smegmatis str. MC2 155] gi|118170935|gb|ABK71831.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=448 Score = 335 bits (858), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 197/412 (48%), Positives = 250/412 (61%), Gaps = 27/412 (6%) Query 173 ANPGPNPAPNPPATGPQP-------------------PNATQLTPNPAPAPDPAPAAAPD 213 A+P P PN A G P P T TP A AP A Sbjct 39 ADPCSVPTPNASARGLTPSMPDIISKLPVLHLPIGRKPVQTASTPEEAKDTAVAPNTAAR 98 Query 214 PGATLAGATTSLAEWVTGPDSPNKTLERFGISGTDLGIPWDNGDP-ANRQVLMIFGDTFG 272 A A +T + WVTGP+S + RFGISG DLGI WDNG ANRQVL+ FGDTFG Sbjct 99 AAAEPAASTATTVGWVTGPNS--DSYSRFGISGADLGIMWDNGQTGANRQVLIAFGDTFG 156 Query 273 YCAVDGHQWRYNTLFRSQDRDLGNGVHVTSGDASNRYSGSPVR--QPGFSKQLINSIKWA 330 C V +WR NTLFRS DR+L +G+ + + N Y+GSPV +P FS+Q+I S+ A Sbjct 157 NCNVAAQEWRKNTLFRSADRNLADGMSIPNPVPGNIYAGSPVDAARPNFSRQVIKSLGLA 216 Query 331 RDETGIIPTAGIAVGKTQYVNFMSIRNWGRDGEWTTNYSGIAVSKDNGQTWGVFPGTIRA 390 E +IPTAGIAVG TQYVNFMS+ WG G+W+TN+S +AVS DNG+TW V +IR Sbjct 217 GTEVTVIPTAGIAVGTTQYVNFMSVSRWGAPGQWSTNFSAVAVSGDNGETWTVPATSIRP 276 Query 391 SGPDSGGKARFVPGNENFQMGAYLKSNDGYLYSFGTPPGRGGSAYLARVPQRFVPDLTKY 450 S ++ FV G++NFQM AYL+ N GY+Y++ T GRGG +L RV + V D + Y Sbjct 277 SWFNTVPGVPFVWGDQNFQMAAYLRHN-GYVYAYSTGAGRGGMPFLYRVVETAVADKSAY 335 Query 451 QYWNGDSNSWVPNKPDAATPVIPGPVGEMSVQYNTYLKQYLALYTNGMNDVVARTAPAPQ 510 +Y+ W+ P A V+ P EMSV +N +LK+++ LYTN + VV RTA P+ Sbjct 336 EYFT--PFGWIKGFPFLALQVVWAPGSEMSVAWNDHLKKFVMLYTNTTSSVVMRTADKPE 393 Query 511 GPWSAEQMLVSSWQMPGGIYAPMMHPWSTGKDVYFNLSLWSAYNVMLMHTVL 562 GPWS + +VSS +PGGIYAP +HPWS GKD+YF LS WS Y+VMLM T L Sbjct 394 GPWSRAKTIVSSTAVPGGIYAPYIHPWSEGKDLYFTLSRWSDYSVMLMRTSL 445 >gi|126435985|ref|YP_001071676.1| hypothetical protein Mjls_3407 [Mycobacterium sp. JLS] gi|126235785|gb|ABN99185.1| hypothetical protein Mjls_3407 [Mycobacterium sp. JLS] Length=438 Score = 328 bits (841), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 170/341 (50%), Positives = 231/341 (68%), Gaps = 8/341 (2%) Query 225 LAEWVTGPDSPNKTLERFGISGTDLGIPWDNGDP-ANRQVLMIFGDTFGYCAVDGHQWRY 283 + + + GP+S + RFGISG DLGI WDNG+ A RQVL+ FGDTFG C++ +WR Sbjct 102 IVDTIAGPNS--SSYPRFGISGADLGILWDNGNSGAQRQVLIAFGDTFGNCSLQDQEWRK 159 Query 284 NTLFRSQDRDLGNGVHVTSGDASNRYSGSPVR--QPGFSKQLINSIKWARDETGIIPTAG 341 NTLFRS DL NG+ VT +R+ GSPV +P FS+Q+I S+ A E +IPTAG Sbjct 160 NTLFRSATTDLSNGMTVTDPVPGDRFGGSPVNADRPSFSRQVIQSLNLAATEVTVIPTAG 219 Query 342 IAVGKTQYVNFMSIRNWGRDGEWTTNYSGIAVSKDNGQTWGVFPGTIRASGPDSGGKARF 401 I+VG QYVNFMS+ WG G+W+TN+S +AVS DNG+TW V +IR S ++ +F Sbjct 220 ISVGTRQYVNFMSVSQWGAPGQWSTNFSAVAVSDDNGETWTVPRTSIRPSWFNTVPGVQF 279 Query 402 VPGNENFQMGAYLKSNDGYLYSFGTPPGRGGSAYLARVPQRFVPDLTKYQYWNGDSNSWV 461 V G++NFQMGAYL+ GY+Y++GT GRGG +L+RV + V D + Y+Y+ W+ Sbjct 280 VWGDQNFQMGAYLRYK-GYVYAYGTGAGRGGMPFLSRVNENAVADKSAYEYYT--PFGWL 336 Query 462 PNKPDAATPVIPGPVGEMSVQYNTYLKQYLALYTNGMNDVVARTAPAPQGPWSAEQMLVS 521 P A V+ P EMSV +N +L +++ LYTN ++DVV RTA P+GPWS+ + +V+ Sbjct 337 RGFPFLAVQVVWAPGSEMSVAWNDHLNKFVMLYTNTVSDVVMRTADKPEGPWSSAKTVVT 396 Query 522 SWQMPGGIYAPMMHPWSTGKDVYFNLSLWSAYNVMLMHTVL 562 S +PGGIYAP +HPWS G+D+YF LS WS Y+ +LMHT L Sbjct 397 SAAVPGGIYAPYIHPWSKGRDLYFTLSRWSDYSTLLMHTSL 437 >gi|229491537|ref|ZP_04385358.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] gi|229321218|gb|EEN87018.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] Length=389 Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 163/345 (48%), Positives = 221/345 (65%), Gaps = 29/345 (8%) Query 223 TSLAEWVTGPDSPNKTLERFGISGTDLGIPWDNGDPANRQVLMIFGDTFG-----YCAVD 277 TS E++TG SPN+T+ERF + GTDLGI WDNG + QVL FGDT G C+ Sbjct 67 TSAVEYITGALSPNQTVERFNVLGTDLGIMWDNG---SGQVLTAFGDTVGIGSDPLCSGV 123 Query 278 GHQWRYNTLFRSQDRDLGNGVHVTSGDASNRYSGSPVRQPGFSKQLINSIKWARDETGII 337 WR N LFRS D +L +G+++ S SP +P S+++I S+K ET I Sbjct 124 VGDWRSNVLFRSSDGNLSDGMNIDS---------SPTDRPNHSREIIGSLKVTGVETSSI 174 Query 338 PTAGIAVGKTQYVNFMSIRNWGRDGEWTTNYSGIAVSKDNGQTWGVFPGTIRASGPDSGG 397 PT GI+VG QYVN+MSIR+WG GEW TN+S IA S DNG+TW + P + R + P Sbjct 175 PTTGISVGGVQYVNYMSIRSWGGSGEWVTNFSQIASSHDNGETWQIEPASSRPNLP---- 230 Query 398 KARFVPGNENFQMGAYLKSNDGYLYSFGTPPGRGGSAYLARVPQRFVPDLTKYQYWNGDS 457 + GN+NFQMG+++K + GY+Y+FGTP GR G L+RV + + D+ Y+YW+G Sbjct 231 ----LTGNDNFQMGSFVK-DGGYVYNFGTPAGRFGEGRLSRVKEASIADVAAYEYWDG-- 283 Query 458 NSWVPNKPDAATPVIPGPVGEMSVQYNTYLKQYLALYTNGMNDVVARTAPAPQGPWSAEQ 517 +WVPN P AA V+ G V E+SVQYN YL +++A+Y+N +V RTA GPWSA Sbjct 284 KAWVPNNPAAAAVVLDGDVSELSVQYNNYLGKFVAMYSNEWGALVLRTASDLTGPWSAPD 343 Query 518 MLVSSWQMPGGIYAPMMHPWSTGKDVYFNLSLWSAYNVMLMHTVL 562 +++ + ++P G+Y MHPWS G+D+YF + WS YNVMLM T L Sbjct 344 VVIGTDEVP-GLYGAYMHPWSQGQDLYFLATTWSDYNVMLMKTTL 387 >gi|226308959|ref|YP_002768919.1| hypothetical protein RER_54720 [Rhodococcus erythropolis PR4] gi|226188076|dbj|BAH36180.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] Length=389 Score = 304 bits (779), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 164/345 (48%), Positives = 220/345 (64%), Gaps = 29/345 (8%) Query 223 TSLAEWVTGPDSPNKTLERFGISGTDLGIPWDNGDPANRQVLMIFGDTFG-----YCAVD 277 TS E++TG SPN+T+ERF + GTDLGI WDNG QVL FGDT G C+ Sbjct 67 TSAVEYITGALSPNQTVERFNVLGTDLGIMWDNGAG---QVLTAFGDTVGIGSDPLCSGV 123 Query 278 GHQWRYNTLFRSQDRDLGNGVHVTSGDASNRYSGSPVRQPGFSKQLINSIKWARDETGII 337 WR N LFRS D +L +G+++ S SP +P S+++I S+K ET I Sbjct 124 VGDWRSNVLFRSSDGNLSDGMNIDS---------SPTDRPNHSREIIGSLKVTGVETSSI 174 Query 338 PTAGIAVGKTQYVNFMSIRNWGRDGEWTTNYSGIAVSKDNGQTWGVFPGTIRASGPDSGG 397 PT GI+VG QYVN+MSIR+WG GEW TN+S IA S DNG+TW V P + R + P Sbjct 175 PTTGISVGGVQYVNYMSIRSWGGSGEWVTNFSQIASSHDNGETWQVEPASSRPNLP---- 230 Query 398 KARFVPGNENFQMGAYLKSNDGYLYSFGTPPGRGGSAYLARVPQRFVPDLTKYQYWNGDS 457 + GN+NFQMG+++K + GY+Y+FGTP GR G L+RV + + D+ Y+YW+G Sbjct 231 ----LTGNDNFQMGSFVK-DGGYVYNFGTPAGRFGEGRLSRVKEASIADVAAYEYWDG-- 283 Query 458 NSWVPNKPDAATPVIPGPVGEMSVQYNTYLKQYLALYTNGMNDVVARTAPAPQGPWSAEQ 517 +WVPN P AA V+ G V E+SVQYN YL +++A+Y+N +V RTA GPWSA Sbjct 284 KAWVPNNPAAAAVVLDGDVSELSVQYNDYLGKFVAMYSNEWGALVLRTASDLTGPWSAPD 343 Query 518 MLVSSWQMPGGIYAPMMHPWSTGKDVYFNLSLWSAYNVMLMHTVL 562 +++ + ++P G+Y MHPWS G+D+YF + WS YNVMLM T L Sbjct 344 VVIGTDEVP-GLYGAYMHPWSQGQDLYFLATTWSDYNVMLMKTTL 387 >gi|325048880|dbj|BAJ79307.1| hypothetical protein [Rhodococcus erythropolis] Length=386 Score = 304 bits (778), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 163/345 (48%), Positives = 220/345 (64%), Gaps = 29/345 (8%) Query 223 TSLAEWVTGPDSPNKTLERFGISGTDLGIPWDNGDPANRQVLMIFGDTFG-----YCAVD 277 TS E++TG SPN+T+ERF + GTDLGI WDNG QVL FGDT G C+ Sbjct 64 TSAVEYITGALSPNQTVERFNVLGTDLGIMWDNGAG---QVLTAFGDTVGIGSDPLCSGV 120 Query 278 GHQWRYNTLFRSQDRDLGNGVHVTSGDASNRYSGSPVRQPGFSKQLINSIKWARDETGII 337 WR N LFRS D +L +G+++ S SP +P S+++I S+K ET I Sbjct 121 VGDWRSNVLFRSSDGNLSDGMNIDS---------SPTDRPNHSREIIGSLKVTGVETSSI 171 Query 338 PTAGIAVGKTQYVNFMSIRNWGRDGEWTTNYSGIAVSKDNGQTWGVFPGTIRASGPDSGG 397 PT GI+VG QYVN+MSIR+WG GEW TN+S IA S DNG+TW + P + R + P Sbjct 172 PTTGISVGGVQYVNYMSIRSWGGSGEWVTNFSQIASSHDNGETWQIEPASSRPNLP---- 227 Query 398 KARFVPGNENFQMGAYLKSNDGYLYSFGTPPGRGGSAYLARVPQRFVPDLTKYQYWNGDS 457 + GN+NFQMG+++K + GY+Y+FGTP GR G L+RV + + D+ Y+YW+G Sbjct 228 ----LTGNDNFQMGSFVK-DGGYVYNFGTPAGRFGEGRLSRVKEASIADVAAYEYWDG-- 280 Query 458 NSWVPNKPDAATPVIPGPVGEMSVQYNTYLKQYLALYTNGMNDVVARTAPAPQGPWSAEQ 517 +WVPN P AA V+ G V E+SVQYN YL +++A+Y+N +V RTA GPWSA Sbjct 281 KAWVPNNPAAAAVVLDGDVSELSVQYNNYLGKFVAMYSNEWGALVLRTASDLTGPWSAPD 340 Query 518 MLVSSWQMPGGIYAPMMHPWSTGKDVYFNLSLWSAYNVMLMHTVL 562 +++ + ++P G+Y MHPWS G+D+YF + WS YNVMLM T L Sbjct 341 VVIGTDEVP-GLYGAYMHPWSQGQDLYFLATTWSDYNVMLMKTTL 384 >gi|333918903|ref|YP_004492484.1| hypothetical protein AS9A_1232 [Amycolicicoccus subflavus DQS3-9A1] gi|333481124|gb|AEF39684.1| hypothetical protein AS9A_1232 [Amycolicicoccus subflavus DQS3-9A1] Length=433 Score = 301 bits (772), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 162/345 (47%), Positives = 217/345 (63%), Gaps = 10/345 (2%) Query 223 TSLAEWVTGPDSPNKTLERFGISGTDLGIPWDNG-DPANRQVLMIFGDTFGYCAVDGHQW 281 T W+TG +SPN T RFGI+GTDLGI WDNG ++Q+L+ FGDT G C G QW Sbjct 70 TQSVSWMTGANSPNDTFSRFGITGTDLGIMWDNGGSEDDQQLLVAFGDTVGDCRQPGGQW 129 Query 282 RYNTLFRSQDRDLGNGVHVTSGDASNRYSGSPVRQPG--FSKQLINSIKWARDETGIIPT 339 R N L RS D DL +GV + + ++ + V G F+ Q+I + + E IIPT Sbjct 130 RSNALLRSVDTDLSDGVDLLAPGHTDSLVAASVAPEGQDFAHQIIEGLGLSGVEVTIIPT 189 Query 340 AGIAVGKTQYVNFMSIRNWGRDGEWTTNYSGIAVSKDNGQTWGVFPGTIRASGPDS-GGK 398 A +A+ QY+N+MS+R WG G+W TN+S IAVS DNG TW TIR + S G Sbjct 190 AAVAIDGKQYINYMSVREWGDHGDWRTNFSAIAVSDDNGHTWETALSTIRLNSDVSFEGV 249 Query 399 ARFVPGNENFQMGAYLKSNDGYLYSFGTPPGRGGSAYLARVPQRFVPDLTKYQYWNGDSN 458 +F G+ENFQM AY++S + YLY GTPPGR G+A+L+RV + DL+ Y+YWNG Sbjct 250 PQFDAGHENFQMHAYVRSGE-YLYGLGTPPGRFGAAHLSRVAVGDILDLSAYEYWNG--V 306 Query 459 SWVPNKPDAATPVIPGPVGEMSVQYNTYLKQYLALYTNG-MNDVVARTAPAPQGPWSAEQ 517 SW + PVIP PV E+SVQ+N YL +++A+Y + +V RTA +P+GPWS Sbjct 307 SWAVEAAQ-SEPVIPAPVSELSVQWNEYLGKFVAMYADEPAGTIVLRTAESPEGPWSDAT 365 Query 518 MLVSSWQMPGGIYAPMMHPWSTGKDVYFNLSLWSAYNVMLMHTVL 562 L+ S + G+YAP +HPWS+G +YF +S WS YNV+LM T L Sbjct 366 ALIDSSDIS-GLYAPYIHPWSSGNTLYFAISRWSDYNVLLMRTDL 409 >gi|226308967|ref|YP_002768927.1| hypothetical protein RER_54800 [Rhodococcus erythropolis PR4] gi|226188084|dbj|BAH36188.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] Length=399 Score = 300 bits (767), Expect = 6e-79, Method: Compositional matrix adjust. Identities = 164/354 (47%), Positives = 230/354 (65%), Gaps = 29/354 (8%) Query 218 LAGATTSLAEWVTGPDSPNKTLERFGISGTDLGIPWDNGDPANRQVLMIFGDTFGYC--- 274 L+G TT++ E +TG SPNKT++RF + GTDLGI WDNG Q+L FGDT G Sbjct 64 LSGRTTAI-EKITGTYSPNKTVDRFNVLGTDLGIMWDNGAG---QILTAFGDTTGLSRNP 119 Query 275 AVDG--HQWRYNTLFRSQDRDLGNGVHVTSGDASNRYSGSPVRQPGFSKQLINSIKWARD 332 DG +WR N LFRS DR L +G+ + S +P G ++++I+ +K Sbjct 120 TCDGLVGEWRSNVLFRSSDRVLADGMRIDS---------APKDGTGQAREIISGLKIPGV 170 Query 333 ETGIIPTAGIAVGKTQYVNFMSIRNWGRDGEWTTNYSGIAVSKDNGQTWGVFPGTIRASG 392 E IPT+GIAV QY+++MS+RNWG G+W+TNYS IA S DNG+TW + P T+R Sbjct 171 EASSIPTSGIAVNGVQYLSYMSVRNWGEAGQWSTNYSQIATSSDNGETWTMRPETLR--- 227 Query 393 PDSGG----KARFVPGNENFQMGAYLKSNDGYLYSFGTPPGRGGSAYLARVPQRFVPDLT 448 P+ GG V G+ENFQM + +K + G++Y++GTP GR G L+RVP+ + DL+ Sbjct 228 PNIGGVLPAGVAPVAGSENFQMSSMVK-DGGFVYNYGTPAGRSGEVRLSRVPEGAILDLS 286 Query 449 KYQYWNGDSNSWVPNKPDAATPVIPGPVGEMSVQYNTYLKQYLALYTNGMNDVVARTAPA 508 Y+YWNG N W+ P AA PV+ G +GE+SVQYN +L +++A+Y + + +V RTAP+ Sbjct 287 AYEYWNG--NGWIRADPAAAVPVMGGRIGEISVQYNEFLGKFVAMYADAFSSIVMRTAPS 344 Query 509 PQGPWSAEQMLVSSWQMPGGIYAPMMHPWSTGKDVYFNLSLWSAYNVMLMHTVL 562 P GPW+A + LV+ ++P GIYA +HPWS+G D+YF + W+ YNVMLM T L Sbjct 345 PVGPWTAPETLVNLVEVP-GIYAAYIHPWSSGSDLYFLATTWADYNVMLMRTTL 397 >gi|229491489|ref|ZP_04385310.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] gi|229321170|gb|EEN86970.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] Length=390 Score = 294 bits (753), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 161/354 (46%), Positives = 227/354 (65%), Gaps = 29/354 (8%) Query 218 LAGATTSLAEWVTGPDSPNKTLERFGISGTDLGIPWDNGDPANRQVLMIFGDTFGYC--- 274 L+G T ++ E VTG SPNKT++RF + GTDLGI WDNG Q+L FGDT G Sbjct 55 LSGRTAAI-EKVTGTYSPNKTVDRFNVLGTDLGIMWDNGAG---QILTAFGDTTGLSRNP 110 Query 275 AVDGH--QWRYNTLFRSQDRDLGNGVHVTSGDASNRYSGSPVRQPGFSKQLINSIKWARD 332 DG +WR N LFRS DR L +G+ + S +P+ ++++I+ +K Sbjct 111 GCDGLVGEWRSNVLFRSSDRVLADGMRIDS---------APMDGTAQAREIISGLKIPGV 161 Query 333 ETGIIPTAGIAVGKTQYVNFMSIRNWGRDGEWTTNYSGIAVSKDNGQTWGVFPGTIRASG 392 E IPT+GIAV QY+++MS+RNWG G+W+TNYS IA S DNG+TW P T+R Sbjct 162 EASSIPTSGIAVNGVQYLSYMSVRNWGEAGQWSTNYSQIATSSDNGETWTTRPETLR--- 218 Query 393 PDSGG----KARFVPGNENFQMGAYLKSNDGYLYSFGTPPGRGGSAYLARVPQRFVPDLT 448 P+ GG V G+ENFQM + +K + G++Y++GTP GR G L+R P+ + DL+ Sbjct 219 PNIGGVLPAGVAPVAGSENFQMSSMVK-DGGFVYNYGTPAGRSGEVRLSRAPEGAILDLS 277 Query 449 KYQYWNGDSNSWVPNKPDAATPVIPGPVGEMSVQYNTYLKQYLALYTNGMNDVVARTAPA 508 Y+YWNG + W+ P AA PV+ G +GE+SVQYN +L +++A+Y + + +V RTAP+ Sbjct 278 AYEYWNG--SGWILADPAAAVPVMDGRIGEVSVQYNEFLGKFVAMYADAFSSIVMRTAPS 335 Query 509 PQGPWSAEQMLVSSWQMPGGIYAPMMHPWSTGKDVYFNLSLWSAYNVMLMHTVL 562 P GPW+A + LV+ ++P GIYA +HPWS+G D+YF + W+ YNVMLM T L Sbjct 336 PVGPWTAPETLVNLVEVP-GIYAAYIHPWSSGSDLYFLATTWADYNVMLMRTTL 388 >gi|108800362|ref|YP_640559.1| hypothetical protein Mmcs_3396 [Mycobacterium sp. MCS] gi|119869491|ref|YP_939443.1| hypothetical protein Mkms_3459 [Mycobacterium sp. KMS] gi|108770781|gb|ABG09503.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119695580|gb|ABL92653.1| conserved hypothetical protein [Mycobacterium sp. KMS] Length=300 Score = 290 bits (742), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 149/302 (50%), Positives = 205/302 (68%), Gaps = 5/302 (1%) Query 263 VLMIFGDTFGYCAVDGHQWRYNTLFRSQDRDLGNGVHVTSGDASNRYSGSPVR--QPGFS 320 +L+ FGDTFG C++ +WR NTLFRS DL NG+ VT +R+ GSPV +P FS Sbjct 1 MLIAFGDTFGNCSLQDQEWRKNTLFRSATTDLSNGMTVTDPVPGDRFGGSPVNADRPSFS 60 Query 321 KQLINSIKWARDETGIIPTAGIAVGKTQYVNFMSIRNWGRDGEWTTNYSGIAVSKDNGQT 380 +Q+I S+ A E +IPTAGI+VG QYVNFMS+ WG G+W+TN+S +AVS DNG+T Sbjct 61 RQVIQSLNLAATEVTVIPTAGISVGTRQYVNFMSVSQWGAPGQWSTNFSAVAVSDDNGET 120 Query 381 WGVFPGTIRASGPDSGGKARFVPGNENFQMGAYLKSNDGYLYSFGTPPGRGGSAYLARVP 440 W V +IR S ++ +FV G++NFQMGAYL+ GY+Y++GT GRGG +L+RV Sbjct 121 WTVPRTSIRPSWFNTVPGVQFVWGDQNFQMGAYLRYK-GYVYAYGTGAGRGGMPFLSRVN 179 Query 441 QRFVPDLTKYQYWNGDSNSWVPNKPDAATPVIPGPVGEMSVQYNTYLKQYLALYTNGMND 500 + V D + Y+Y+ W+ P A V+ P EMSV +N +L +++ LYTN ++D Sbjct 180 ENAVADKSAYEYYT--PFGWLRGFPFLAVQVVWAPGSEMSVAWNDHLNKFVMLYTNTVSD 237 Query 501 VVARTAPAPQGPWSAEQMLVSSWQMPGGIYAPMMHPWSTGKDVYFNLSLWSAYNVMLMHT 560 VV RTA P+GPWS+ + +V+S +PGGIYAP +HPWS G+D+YF LS WS Y+ +LMHT Sbjct 238 VVMRTADKPEGPWSSAKTVVTSAAVPGGIYAPYIHPWSKGRDLYFTLSRWSDYSTLLMHT 297 Query 561 VL 562 L Sbjct 298 SL 299 >gi|108797391|ref|YP_637588.1| hypothetical protein Mmcs_0411 [Mycobacterium sp. MCS] gi|119866475|ref|YP_936427.1| hypothetical protein Mkms_0420 [Mycobacterium sp. KMS] gi|126433012|ref|YP_001068703.1| hypothetical protein Mjls_0399 [Mycobacterium sp. JLS] gi|108767810|gb|ABG06532.1| hypothetical protein Mmcs_0411 [Mycobacterium sp. MCS] gi|119692564|gb|ABL89637.1| conserved hypothetical protein [Mycobacterium sp. KMS] gi|126232812|gb|ABN96212.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=701 Score = 289 bits (739), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 182/422 (44%), Positives = 237/422 (57%), Gaps = 72/422 (17%) Query 205 DPAPAAAPDPGATLAGATTSLAEWVTGPDSPNKTLERFGISGTDLGIPWDNGDPAN---- 260 DPA P +++G T + VTGP N T RFGI GTDLGI WDNG N Sbjct 285 DPAKDYVVTP-VSVSGNTVRITN-VTGPGGLNNTTTRFGIGGTDLGIMWDNGIKDNPNTA 342 Query 261 ---RQVLMIFGDTFG-YCAVDGHQWRYNTLFRSQDRDLGNGVHVTSGDASN--RYSGSPV 314 QVL+ FGDTF V WR NTLFRS D L NG++V G + YSGSP+ Sbjct 343 VNEHQVLIAFGDTFSNRTPVRTGVWRMNTLFRSTDTVLSNGMYVADGIPHDPGMYSGSPM 402 Query 315 RQPGFSKQLINSIKWARD-ETGIIPTAGIAV---GKT----QYVNFMSIRNWGRDGEWTT 366 P FS+++I + + E +IPTA I+V GK QY+N+M++++W G WTT Sbjct 403 SDPNFSREIIGNYHYGIGPEVTMIPTAAISVPGAGKDGATRQYINYMAVKSWDSPGRWTT 462 Query 367 NYSGIAVSKDNGQTWGVFP-GTIRASGPDSGGKAR--FVPGNENFQMGAYLKS------- 416 NYS IA S DNGQ W V P ++R P + G+ FV G++NFQ GAY++ Sbjct 463 NYSAIAYSDDNGQNWTVVPQSSVR---PAAAGRTILPFVNGDQNFQQGAYVRKYTVDPVT 519 Query 417 ------------NDGYLYSFGTPPGRGGSAYLARVPQRFVPDLTKYQYWNGDSNSWVPNK 464 DGY+YS+GTP GR G+AY++RV + + D TKY+YWNG SW P Sbjct 520 GKPLKNAAGQEITDGYIYSYGTPAGRTGTAYVSRVAEADILDKTKYEYWNG--TSWTPGN 577 Query 465 PDAATPVIPGP----------------VGEMSVQYNTYLKQYLALYTNGMNDVVARTAPA 508 P AA P++P V EMSVQYN+Y K+Y+ LY + N++V R A + Sbjct 578 PAAAKPILPSTTTTSFFGLIKTTTYPTVSEMSVQYNSYEKKYIMLYGDKNNNIVMRKADS 637 Query 509 PQGPWSAEQMLVSSWQMPGGIYAPMMHPWSTGKDV--------YFNLSLWSAYNVMLMHT 560 P+GPWSA LV+S +MP G+YAPM+HPWS+ +V Y+NLS W Y V LM T Sbjct 638 PEGPWSAPITLVTSSKMP-GLYAPMIHPWSSTDNVSAADQQYLYWNLSTWDDYQVKLMRT 696 Query 561 VL 562 L Sbjct 697 DL 698 >gi|120406128|ref|YP_955957.1| hypothetical protein Mvan_5180 [Mycobacterium vanbaalenii PYR-1] gi|119958946|gb|ABM15951.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=692 Score = 288 bits (738), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 197/542 (37%), Positives = 266/542 (50%), Gaps = 91/542 (16%) Query 96 SGDAANAPPPPSAIVTDPGATALGPVRPGHGPIPTGRKPRGANDRAPLPKLGPLISALLN 155 S D A P P + AT+L P D A K LI+A++N Sbjct 164 SDDPAVPPQEPKKVAVFATATSLAESSPKTLSPKVAALLTTEQDEAAAAKKPNLITAVVN 223 Query 156 PGARNAAPLQQQALVPRANPGPNPAPNPPA-------------------TGPQPPNATQL 196 +Q +A+ P AP PP + P T + Sbjct 224 VVTSMLDWARQ-----KADAKPGDAPQPPFLWALLSFARRELDNLFAARSTTNAPRTTSV 278 Query 197 TPNPAPAPDPAPAAAPDPGAT-----LAGATTSLAEWVTGP------DSPNKTLERFGIS 245 TP D A AA P + +T WVTG D+ TL RF + Sbjct 279 TPTSLALTDDATTAALIPSYSPWLNPQVSPSTRFVSWVTGKYVYLDDDTLANTLARFSVY 338 Query 246 GTDLGIPWDNG--------DPANRQVLMIFGDTFGYCAVDGHQWRYNTLFRSQDRDLGNG 297 GTD+G+ WDNG D Q+L+ GDTFG + G YNTLFRS D DL +G Sbjct 339 GTDVGVMWDNGMVDDPSTPDINEHQILIAVGDTFGAKGMTGRH-IYNTLFRSSDTDLSDG 397 Query 298 VHVTSGD--ASNRYSGSPVRQPGFSKQLINSIKWARDETGIIPTAGIAV----------G 345 + + G+ N + G+P+ P ++ +IN W + +IPTAG+++ G Sbjct 398 MTIPDGEWFNGNMFGGAPLDGPTQARPIINRPSWLPNSVTLIPTAGVSLPTEVTEDTPFG 457 Query 346 KTQYVNFMSIRNWGRDGEWTTNYSGIAVSKDNGQTWGVFPGTIRASGPDSGGKARFVPGN 405 QYV+FMS+ NWG G WTTNYS IA S DNG+ + V P ++R + GN Sbjct 458 TIQYVSFMSVSNWGSSGRWTTNYSAIAYSTDNGENFKVAPESVRYN--------SIFSGN 509 Query 406 ENFQMGAYLKSNDGYLYSFGTPPGRGGSAYLARVPQRFVPDLTKYQY-------WNGDSN 458 NFQ A++K +DGY+Y +GTP GR G+AY+ARV + D+++Y+Y W G S Sbjct 510 RNFQQSAFVKGDDGYVYVYGTPNGRQGAAYVARVNNENILDVSEYEYYKAASTGWFGSSE 569 Query 459 S-WVPNKPDAATPVI-----------PG-PVGEMSVQYNTYLKQYLALYTNGMNDVVART 505 + WV P +A+ VI PG V EMSVQYN YL++Y+ LY + N++V RT Sbjct 570 ARWVKGNPSSASAVIGKTGGACGSTEPGYTVSEMSVQYNEYLQKYIVLYGDQFNNIVMRT 629 Query 506 APAPQGPWSAEQMLVSSWQMPGGIYAPMMHPWS-----TGKDVYFNLSLWSAYNVMLMHT 560 + P+G WS +L+ Q GGIYAPM+HPWS TG D+Y+NLSLWS YNVMLM T Sbjct 630 SDTPEGAWSDATVLMG--QQSGGIYAPMLHPWSPSTQGTGSDLYWNLSLWSDYNVMLMKT 687 Query 561 VL 562 L Sbjct 688 DL 689 >gi|226360708|ref|YP_002778486.1| hypothetical protein ROP_12940 [Rhodococcus opacus B4] gi|226239193|dbj|BAH49541.1| hypothetical protein [Rhodococcus opacus B4] Length=396 Score = 288 bits (736), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 168/373 (46%), Positives = 226/373 (61%), Gaps = 39/373 (10%) Query 199 NPAPAPDPAPAAAPDPGATLAGATTSLAEWVTGPDSPNKTLERFGISGTDLGIPWDNGDP 258 NP P + + P+ L G T ++A +TGP SPN T+ RF + GTDLGI WDNG Sbjct 52 NPIPWLNGSDGRLPE----LRGKTQAIAH-ITGPRSPNDTIGRFRVLGTDLGIMWDNG-- 104 Query 259 ANRQVLMIFGDTFGY-----CAVDGHQWRYNTLFRSQDRDLGNGVHVTSGDASNRYSGSP 313 ++L FGDT G C + G WR N L RS D+DL +G+ + + SP Sbjct 105 -RGEILTAFGDTVGLSDNPLCGLVG-DWRSNILLRSSDKDLTDGMGIDN---------SP 153 Query 314 VRQPGFSKQLINSIKWARDETGIIPTAGIAVGK----TQYVNFMSIRNWGRDGEWTTNYS 369 V P SK++I S K E +IPT GI+VG+ TQY+N+MS+R+WG GEW TN S Sbjct 154 VDGPNHSKEIIQSKKIPGVEQTVIPTTGISVGEGPASTQYINYMSVRSWGAPGEWDTNAS 213 Query 370 GIAVSKDNGQTWGVFPGTIRASGPDSGGKARFVPGNENFQMGAYLKSNDGYLYSFGTPPG 429 GIA S DNG+ W P T+R + P +G ENFQMG+Y+K +DG++Y+FGTP G Sbjct 214 GIAYSVDNGENWITDPLTLRPNVPGTGA--------ENFQMGSYVK-HDGFVYAFGTPSG 264 Query 430 RGGSAYLARVPQRFVPDLTKYQYWNGDSNSWVPNKPDAATPVIPGPVGEMSVQYNTYLKQ 489 R G A L+RV + + +LT Y+YW+G +WV A PVIPGPV E+SV++N YL Q Sbjct 265 RSGDARLSRVKEADIRNLTLYEYWDG--KAWVKANATVAAPVIPGPVSELSVRFNEYLGQ 322 Query 490 YLALYTNGMNDVVARTAPAPQGPWSAEQMLVSSWQMPGGIYAPMMHPWSTGKDVYFNLSL 549 ++A+YT+ N VV R + + WS ++LVSS +P +Y MHPWS G D+YF + Sbjct 323 FVAMYTDAGNSVVMRRSDHLESGWSEPEVLVSSRDVP-ELYGAYMHPWSKGSDLYFLATT 381 Query 550 WSAYNVMLMHTVL 562 WS YNVML+ T L Sbjct 382 WSDYNVMLLRTNL 394 >gi|111018589|ref|YP_701561.1| hypothetical protein RHA1_ro01590 [Rhodococcus jostii RHA1] gi|110818119|gb|ABG93403.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=396 Score = 286 bits (732), Expect = 7e-75, Method: Compositional matrix adjust. Identities = 168/373 (46%), Positives = 222/373 (60%), Gaps = 39/373 (10%) Query 199 NPAPAPDPAPAAAPDPGATLAGATTSLAEWVTGPDSPNKTLERFGISGTDLGIPWDNGDP 258 NP P + + P+ L G T ++A +TGP S N T+ RF + GTDLGI WDNG Sbjct 52 NPIPWLNGSDGRLPE----LRGKTQAIAH-ITGPRSSNDTIGRFRVLGTDLGIMWDNG-- 104 Query 259 ANRQVLMIFGDTFGY-----CAVDGHQWRYNTLFRSQDRDLGNGVHVTSGDASNRYSGSP 313 ++L FGDT G C + G WR N L RS D+DL +G+ R SP Sbjct 105 -GGEILTAFGDTVGLSDNPLCGLVG-DWRSNILLRSSDKDLTDGM---------RIDNSP 153 Query 314 VRQPGFSKQLINSIKWARDETGIIPTAGIAVGK----TQYVNFMSIRNWGRDGEWTTNYS 369 V P SK++I S K E +IPT GI+VG+ TQY+N+MS+R+WG GEW TN S Sbjct 154 VDTPNHSKEIIQSKKIPGVEQTVIPTTGISVGEGPGATQYINYMSVRSWGAPGEWDTNAS 213 Query 370 GIAVSKDNGQTWGVFPGTIRASGPDSGGKARFVPGNENFQMGAYLKSNDGYLYSFGTPPG 429 GIA S DNG+ W P T+R + P +G ENFQMG+Y+K +DG++Y FGTP G Sbjct 214 GIAYSVDNGENWVTDPLTLRPNVPGTGA--------ENFQMGSYVK-HDGFVYGFGTPSG 264 Query 430 RGGSAYLARVPQRFVPDLTKYQYWNGDSNSWVPNKPDAATPVIPGPVGEMSVQYNTYLKQ 489 R G A L+RV + + +LT Y+YW+G +W A PVIPGPV E+SVQ+N YL Q Sbjct 265 RSGDARLSRVKEADIRNLTLYEYWDG--KAWAKANATVAAPVIPGPVSELSVQFNQYLGQ 322 Query 490 YLALYTNGMNDVVARTAPAPQGPWSAEQMLVSSWQMPGGIYAPMMHPWSTGKDVYFNLSL 549 ++A+YT+ N VV R + + WS ++LVSS +P +Y MHPWS G D+YF + Sbjct 323 FVAMYTDAGNSVVMRRSDHLESGWSEPEVLVSSRDVP-ELYGAYMHPWSQGSDLYFLATT 381 Query 550 WSAYNVMLMHTVL 562 WS YNVML+ T L Sbjct 382 WSDYNVMLLRTNL 394 >gi|229493990|ref|ZP_04387759.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] gi|229319059|gb|EEN84911.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] Length=444 Score = 283 bits (725), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 158/349 (46%), Positives = 207/349 (60%), Gaps = 18/349 (5%) Query 217 TLAGATTSLAEWVTGPDSPNKTLERFGISGTDLGIPWDNGDPA-NRQVLMIFGDTFGYCA 275 L G T ++ E VTGP SPN T+ERF +SGTDLGI WDNG + VLM FGDT G C Sbjct 78 VLTGRTKAI-EMVTGPGSPNNTIERFNVSGTDLGIMWDNGLSGPDHDVLMAFGDTVGDCD 136 Query 276 VDGHQWRYNTLFRSQDRDLGNGVHVTSGDASNRYSGSPVRQPGFSKQLINSIKWARDETG 335 G WR N LFRS D + +G+ + S SP+ P +SK++I + T Sbjct 137 TPGDDWRSNVLFRSNDTAIADGMKIDS---------SPLDGPNYSKEIIPGFGIPGEFT- 186 Query 336 IIPTAGIAVGKTQYVNFMSIRNWGRDGEWTTNYSGIAVSKDNGQTWGVFPGTIRASGPDS 395 IPTAGI+ G QY+ FMS+R+W G WTTNYS +A S DNG+ W + P T+RA+ Sbjct 187 TIPTAGISYGGVQYIRFMSVRSWDEPGAWTTNYSALAFSTDNGENWELDPATVRANTEGL 246 Query 396 G--GKARFVPGNENFQMGAYLKSNDGYLYSFGTPPGRGGSAYLARVPQRFVPDLTKYQYW 453 G G P N NFQ A+L DGY+Y +GTP GR G A LARV + +L Y+YW Sbjct 247 GIPGIPAVSPINSNFQQSAFLDGRDGYIYEYGTPSGRFGKAVLARVAGADIRNLGAYEYW 306 Query 454 NGDSNSWVPNKPDAATPVIPGPVGEMSVQYNTYLKQYLALYTNGMNDVVARTAPAPQGPW 513 +G + W P DA VI PV E++VQ+N YL +Y+A+YT+ ++V R A PQGPW Sbjct 307 DG--SGWSPRDTDAVQ-VIKAPVSELAVQWNDYLNKYVAMYTSAEGNLVIRQADQPQGPW 363 Query 514 SAEQMLVSSWQMPGGIYAPMMHPWSTGKDVYFNLSLWSAYNVMLMHTVL 562 S Q L+S +P +Y MHPW++G+ + F + W YNV+ M T L Sbjct 364 SGTQTLLSGITLP-ALYGGFMHPWASGQFLEFVATTWDRYNVIYMRTDL 411 >gi|226307332|ref|YP_002767292.1| hypothetical protein RER_38450 [Rhodococcus erythropolis PR4] gi|226186449|dbj|BAH34553.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] Length=450 Score = 283 bits (723), Expect = 7e-74, Method: Compositional matrix adjust. Identities = 158/349 (46%), Positives = 206/349 (60%), Gaps = 18/349 (5%) Query 217 TLAGATTSLAEWVTGPDSPNKTLERFGISGTDLGIPWDNGDPA-NRQVLMIFGDTFGYCA 275 L G T ++ E VTGP SPN T+ERF +SGTDLGI WDNG + VLM FGDT G C Sbjct 84 VLTGRTKAI-EMVTGPGSPNNTIERFNVSGTDLGIMWDNGLSGPDHDVLMAFGDTVGDCD 142 Query 276 VDGHQWRYNTLFRSQDRDLGNGVHVTSGDASNRYSGSPVRQPGFSKQLINSIKWARDETG 335 G WR N LFRS D + +G+ + S SP+ P SK++I + T Sbjct 143 TPGDDWRSNVLFRSNDTAIADGMKIDS---------SPLDGPNHSKEIIPGFGIPGEFT- 192 Query 336 IIPTAGIAVGKTQYVNFMSIRNWGRDGEWTTNYSGIAVSKDNGQTWGVFPGTIRASGPDS 395 IPTAGI+ G QY+ FMS+R+W G WTTNYS +A S DNG+ W + P T+RA+ Sbjct 193 TIPTAGISYGGVQYIRFMSVRSWDEPGAWTTNYSALAFSTDNGENWELDPATVRANTEGL 252 Query 396 G--GKARFVPGNENFQMGAYLKSNDGYLYSFGTPPGRGGSAYLARVPQRFVPDLTKYQYW 453 G G P N NFQ A+L DGY+Y +GTP GR G A LARV + +L Y+YW Sbjct 253 GIPGIPAVSPINSNFQQSAFLDGRDGYIYEYGTPSGRFGKAVLARVAGADIRNLGAYEYW 312 Query 454 NGDSNSWVPNKPDAATPVIPGPVGEMSVQYNTYLKQYLALYTNGMNDVVARTAPAPQGPW 513 +G + W P DA VI PV E++VQ+N YL +Y+A+YT+ ++V R A PQGPW Sbjct 313 DG--SGWSPRDTDAVQ-VIKAPVSELAVQWNDYLNKYVAMYTSAEGNLVIRQADQPQGPW 369 Query 514 SAEQMLVSSWQMPGGIYAPMMHPWSTGKDVYFNLSLWSAYNVMLMHTVL 562 S Q L+S +P +Y MHPW++G+ + F + W YNV+ M T L Sbjct 370 SGTQTLLSGITLP-ALYGGFMHPWASGQFLEFVATTWDRYNVIYMRTDL 417 >gi|343925444|ref|ZP_08764964.1| hypothetical protein GOALK_045_00850 [Gordonia alkanivorans NBRC 16433] gi|343764710|dbj|GAA11890.1| hypothetical protein GOALK_045_00850 [Gordonia alkanivorans NBRC 16433] Length=428 Score = 282 bits (722), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 165/349 (48%), Positives = 224/349 (65%), Gaps = 14/349 (4%) Query 218 LAGATTSLAEWVTGPDSPNKTLERFGISGTDLGIPWDNGDPANRQVLMIFGDTFGYCAVD 277 L GATT+++ WVTGP SP +T RFGI+ TD+G+PWDNG QVLM FGDT+G CA Sbjct 87 LKGATTAVS-WVTGPRSPERTDARFGITATDVGVPWDNGSG---QVLMAFGDTWGKCA-G 141 Query 278 GHQWRYNTLFRSQ-DRDLGNGVHVTSGDASNRYSGSPVR--QPGFSKQLINSIKWARDET 334 WR+NT+ RS + +L + + + SG+ V P +S+ + N+I E Sbjct 142 QMVWRHNTMLRSDANSNLDKAIRFPTAIPGSVRSGASVTPAHPTYSQPMFNAIGVRNTEV 201 Query 335 GIIPTAGIAVGKTQYVNFMSIRNWGRDGEWTTNYSGIAVSKDNGQTWGVFPGTIRASGPD 394 G IPT GI++ TQ+++FMSI W G W TNYS IAVS++NGQTW V TIRA+ Sbjct 202 GRIPTGGISINGTQFLSFMSIHKWLGPGRWATNYSAIAVSRNNGQTWTVDNNTIRANLEL 261 Query 395 SG-GKARFVPGNENFQMGAYLKSNDGYLYSFGTPPGRGGSAYLARVPQRFVPDLTKYQYW 453 + G + G+ FQMGA+L+S D Y+Y +GTP GR GSA++AR + +L++YQY+ Sbjct 262 TVPGVPQIAQGHSRFQMGAFLRSGD-YIYQYGTPNGRHGSAFVARFRPADILNLSRYQYF 320 Query 454 NGDSNSWVPNKPDAATPVIPGPVGEMSVQYNTYLKQYLALYTNGMNDVVARTAPAPQGPW 513 G N+W PN DAA P++ PV EMSV YN YLK+++ L T V+ RT+P P GPW Sbjct 321 RG-GNAWSPNPADAA-PIVGRPVSEMSVAYNNYLKKFVML-TERAGTVMMRTSPTPVGPW 377 Query 514 SAEQMLVSSWQMPGGIYAPMMHPWSTGKDVYFNLSLWSAYNVMLMHTVL 562 S E++LVS+ Q G+Y P +HP S+GK++YF +S W YNVML T L Sbjct 378 SGERVLVSNKQ-SSGLYTPYIHPRSSGKNLYFVVSRWDDYNVMLARTDL 425 >gi|315442606|ref|YP_004075485.1| hypothetical protein Mspyr1_09600 [Mycobacterium sp. Spyr1] gi|315260909|gb|ADT97650.1| hypothetical protein Mspyr1_09600 [Mycobacterium sp. Spyr1] Length=671 Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 163/392 (42%), Positives = 222/392 (57%), Gaps = 61/392 (15%) Query 221 ATTSLAEWVTGPDSPN------KTLERFGISGTDLGIPWDNG--------DPANRQVLMI 266 A+T WVTG TL+RF + GTD+G+ WDNG D RQVL+ Sbjct 288 ASTKFISWVTGAFYDGDYALLANTLKRFNVYGTDVGVMWDNGMVDDPSTPDIDERQVLIA 347 Query 267 FGDTFGYCAVDGHQWRYNTLFRSQDRDLGNGVHVTSGD--ASNRYSGSPVRQPGFSKQLI 324 GDTFG + G YN+LFRS DRDL +G+ + G+ N + G+P+ +P S+ +I Sbjct 348 VGDTFGGPGMTGRH-IYNSLFRSSDRDLADGMTIPDGEWFNGNMFGGAPLDKPDQSRPII 406 Query 325 NSIKWARDETGIIPTAGIAV----------GKTQYVNFMSIRNWGRDGEWTTNYSGIAVS 374 W +IPTAG+++ G QYV+FMS+ WG+ G W+TNYSGIA S Sbjct 407 ERPAWLPGSVTLIPTAGVSLPTEVSEDTPFGTIQYVSFMSVTRWGQSGRWSTNYSGIAYS 466 Query 375 KDNGQTWGVFPGTIRASGPDSGGKARFVPGNENFQMGAYLKSNDGYLYSFGTPPGRGGSA 434 DNG+ + V P ++R + F GN NFQ A++K +DGY+Y +GTP GR G+A Sbjct 467 TDNGENFTVAPSSVRYNS--------FFSGNRNFQQSAFVKGDDGYVYMYGTPNGRQGAA 518 Query 435 YLARVPQRFVPDLTKYQYWNGDSNSWV-------PNKPDAATPVI-----------PG-P 475 YLARV + + +KY+Y+ S+ W P +A+ +I PG Sbjct 519 YLARVAPEDILNASKYEYYKKASSGWFGGSPARWVGSPSSASAIIGKSGGLFGFTKPGYT 578 Query 476 VGEMSVQYNTYLKQYLALYTNGMNDVVARTAPAPQGPWSAEQMLVSSWQMPGGIYAPMMH 535 V EMSVQYN YLK+Y+ LY + N++V RT+ P+G WS +L+ Q GGIYAPM+H Sbjct 579 VSEMSVQYNEYLKKYIVLYGDQSNNIVMRTSDTPEGGWSDATVLMR--QQTGGIYAPMLH 636 Query 536 PWS-----TGKDVYFNLSLWSAYNVMLMHTVL 562 PWS TG +Y+NLSLWS YN+MLM T L Sbjct 637 PWSPSTEGTGSTLYWNLSLWSEYNIMLMETDL 668 >gi|145222168|ref|YP_001132846.1| hypothetical protein Mflv_1576 [Mycobacterium gilvum PYR-GCK] gi|145214654|gb|ABP44058.1| hypothetical protein Mflv_1576 [Mycobacterium gilvum PYR-GCK] Length=676 Score = 278 bits (710), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 163/392 (42%), Positives = 222/392 (57%), Gaps = 61/392 (15%) Query 221 ATTSLAEWVTGPDSPNK------TLERFGISGTDLGIPWDNG--------DPANRQVLMI 266 A+T WVTG TL+RF + GTD+G+ WDNG D RQVL+ Sbjct 293 ASTKFISWVTGAFYDGDYALLANTLKRFNVYGTDVGVMWDNGMVDDPSTPDIDERQVLIA 352 Query 267 FGDTFGYCAVDGHQWRYNTLFRSQDRDLGNGVHVTSGD--ASNRYSGSPVRQPGFSKQLI 324 GDTFG + G YN+LFRS DRDL +G+ + G+ N + G+P+ +P S+ +I Sbjct 353 VGDTFGGPGMTGRH-IYNSLFRSSDRDLADGMTIPDGEWFNGNMFGGAPLDKPDQSRPII 411 Query 325 NSIKWARDETGIIPTAGIAV----------GKTQYVNFMSIRNWGRDGEWTTNYSGIAVS 374 W +IPTAG+++ G QYV+FMS+ WG+ G W+TNYSGIA S Sbjct 412 ERPAWLPGSVTLIPTAGVSLPTEVSEDTPFGTIQYVSFMSVTRWGQSGRWSTNYSGIAYS 471 Query 375 KDNGQTWGVFPGTIRASGPDSGGKARFVPGNENFQMGAYLKSNDGYLYSFGTPPGRGGSA 434 DNG+ + V P ++R + F GN NFQ A++K +DGY+Y +GTP GR G+A Sbjct 472 TDNGENFTVAPSSVRYNS--------FFSGNRNFQQSAFVKGDDGYVYMYGTPNGRQGAA 523 Query 435 YLARVPQRFVPDLTKYQYWNGDSNSWV-------PNKPDAATPVI-----------PG-P 475 YLARV + + +KY+Y+ S+ W P +A+ +I PG Sbjct 524 YLARVAPEDILNASKYEYYKKASSGWFGGSPARWVGSPSSASAIIGKSGGLFGFTKPGYT 583 Query 476 VGEMSVQYNTYLKQYLALYTNGMNDVVARTAPAPQGPWSAEQMLVSSWQMPGGIYAPMMH 535 V EMSVQYN YLK+Y+ LY + N++V RT+ P+G WS +L+ Q GGIYAPM+H Sbjct 584 VSEMSVQYNEYLKKYIVLYGDQSNNIVMRTSDTPEGGWSDATVLMR--QQTGGIYAPMLH 641 Query 536 PWS-----TGKDVYFNLSLWSAYNVMLMHTVL 562 PWS TG +Y+NLSLWS YN+MLM T L Sbjct 642 PWSPSTEGTGSTLYWNLSLWSEYNIMLMETDL 673 >gi|319950986|ref|ZP_08024857.1| hypothetical protein ES5_15248 [Dietzia cinnamea P4] gi|319435368|gb|EFV90617.1| hypothetical protein ES5_15248 [Dietzia cinnamea P4] Length=455 Score = 274 bits (700), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 158/356 (45%), Positives = 210/356 (59%), Gaps = 24/356 (6%) Query 218 LAGATTSLAEWVTGPDSPNKTLERFGISGTDLGIPWDNGDPANR-QVLMIFGDTFGYCAV 276 L G TT++ E +TGP SPN T++RFGI GTDLGI W+NG QV M GDT G C+V Sbjct 67 LEGRTTTV-ELLTGPTSPNDTVDRFGIWGTDLGIMWENGGAGGEDQVHMALGDTMGDCSV 125 Query 277 DGHQWRYNTLFRSQDRDLGNGVHVTSGDASNRYSGSPVRQPGFSKQLINSIKWARDETGI 336 G QWR N LFRS+DR L +G+ R +P+ +PG +K ++ ET + Sbjct 126 PGDQWRSNILFRSRDRTLHDGM---------RIKNAPMERPGMAKSILPRSN-MPGETTV 175 Query 337 IPTAGIAVGKTQYVNFMSIRNWGRDGEWTTNYSGIAVSKDNGQTWGVFPGTIR---ASGP 393 IPTAG+ VG QY+ +MS+ +WG GEWTTNYS +A S DNG+ W GT R A P Sbjct 176 IPTAGVEVGGVQYLRYMSVEHWGAPGEWTTNYSALARSADNGENWQPVSGTARRGTAPMP 235 Query 394 DSGGKARFVPGNENFQMGAYLKSNDGYLYSFGTPPGRGGSAYLARVPQRFVPDLTKYQYW 453 + + QM A+LK ++G+LY + TP GR GSA LARVP+ + D+ Y+YW Sbjct 236 LPAELGEEFTRHTDGQMSAFLK-HEGFLYEYLTPSGRSGSARLARVPEADIEDMDAYEYW 294 Query 454 NGD--SNSWVPNKPDAATPVIPGPVGEMSVQYNTYLKQYLALYTNGMNDVVARTAPAPQG 511 G S +P P I V E+SV Y+ +L +++ALY N N++V A P G Sbjct 295 TGAGWSREHRDARPVLGAPTINTTVSELSVTYSEHLDRFIALYNNRQNNIVMAQAENPWG 354 Query 512 PWSAEQMLVSSWQMPGGIYAPMMHPWS-----TGKDVYFNLSLWSAYNVMLMHTVL 562 PWS E +LVS Q+P +Y +HPWS G+D+Y+ +S W AYNV LMHT L Sbjct 355 PWSGEDILVSYSQVP-TLYGAFVHPWSPAVETDGEDLYYTMSTWDAYNVFLMHTDL 409 >gi|326383694|ref|ZP_08205379.1| hypothetical protein SCNU_12182 [Gordonia neofelifaecis NRRL B-59395] gi|326197458|gb|EGD54647.1| hypothetical protein SCNU_12182 [Gordonia neofelifaecis NRRL B-59395] Length=448 Score = 273 bits (697), Expect = 7e-71, Method: Compositional matrix adjust. Identities = 167/361 (47%), Positives = 207/361 (58%), Gaps = 32/361 (8%) Query 222 TTSLAEWVTGPDSPNKTLERFGISGTDLGIPWDNGDPANRQVLMIFGDTFGYCAVDGHQW 281 TTSL WVTGP S N+T RF ISGTDLGI WDNG Q LM FGDTFG C+ G QW Sbjct 98 TTSLRSWVTGPRSRNRTFSRFAISGTDLGIAWDNG---AGQTLMAFGDTFGDCSASGQQW 154 Query 282 RYNTLFRSQDRDLGNGVHVTSGDASNRYSGSPVRQ--PGFSKQLINSIKWARDETGIIPT 339 R+N L R+ D DL +G+ V G + SG+ V P ++Q+I +I W E IPT Sbjct 155 RHNVLLRTTDDDLADGITVPDGVPGDIASGASVSADAPQLARQMIGAIGWNGVEITTIPT 214 Query 340 AGIAVGKTQYVNFMSIRNWGRDGEWTTNYSGIAVSKDNGQTWGVFPGTIRASG----PDS 395 A IA+ QY+N+MS+R+WG G W TN+S IAVS DNGQTW TIR + P Sbjct 215 AAIAIDGKQYLNYMSVRHWGPAGVWDTNFSAIAVSSDNGQTWTTALDTIRVNANVTVPLP 274 Query 396 GGKARFVPGNENFQMGAYLKSND---GYLYSFGTPPGRGGSAYLARVPQRFVPDLTKYQY 452 G N NFQ AY+ + G+ Y FGTP GR G+A+L R V DL KYQY Sbjct 275 DGWPSVHAANTNFQQSAYVAGHGDEAGWTYQFGTPNGRFGAAFLTRFRSADVLDLGKYQY 334 Query 453 WNGDSNSWVPNKPDA----ATPVIPGPVGEMSVQYNTYLKQYLALYTNGMNDVVARTAPA 508 W GD W + + A V+ P+ E+SV ++ YL +Y+ L + V RTA Sbjct 335 WTGD--RWADSIDELPAGDAAAVVRAPISELSVAWSPYLNKYVML--DSTTAVRIRTADH 390 Query 509 PQGPWSAEQMLVSSWQMPG--GIYAPMMHPWS-----TGKDVYFNLSLWSAYNVMLMHTV 561 P+GPWSA + LV PG G+YAPMM P S TG D+YFN SLW YNV L+ + Sbjct 391 PEGPWSAPRTLV-----PGTVGLYAPMMLPQSPALRGTGPDLYFNGSLWKDYNVALVRSR 445 Query 562 L 562 L Sbjct 446 L 446 >gi|312141404|ref|YP_004008740.1| hypothetical protein REQ_40930 [Rhodococcus equi 103S] gi|311890743|emb|CBH50062.1| putative secreted protein [Rhodococcus equi 103S] Length=376 Score = 272 bits (696), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 161/351 (46%), Positives = 211/351 (61%), Gaps = 33/351 (9%) Query 217 TLAGATTSLAEWVTGPDSPNKTLERFGISGTDLGIPWDNGDPANRQVLMIFGDTFGY--- 273 +L G + ++A+ TG S N+T + + GTDLGI WDNG N QVL FGDT G Sbjct 52 SLQGRSRAVAQ-ATGLLSANRTQDS-NVLGTDLGIMWDNG---NGQVLTAFGDTAGLGIP 106 Query 274 --CAVDGHQWRYNTLFRSQDRDLGNGVHVTSGDASNRYSGSPVRQPGFSKQLINSIKWAR 331 WR N LFRS DRDL +G+ + +P G SK+LI S K Sbjct 107 NLLVGSLWSWRSNVLFRSSDRDLADGM---------TFDSTPRDIVGQSKELIPSPKIPF 157 Query 332 DETGIIPTAGIAVGKTQYVNFMSIRNWGRDGEWTTNYSGIAVSKDNGQTWGVFPGTIRAS 391 E IPTAGIA QY++ MS++NWG G+W TNYS +A S DNG+ W T R Sbjct 158 VEISRIPTAGIAADGMQYMSIMSVKNWGEPGKWETNYSSLAFSTDNGENWVEATETRRPP 217 Query 392 GPDSGGKARFVPGNENFQMGAYLKSNDGYLYSFGTPPGRGGSAYLARVPQRFVPDLTKYQ 451 V GN NFQMGA++K + ++Y +GTPPGRGG YL RVP++ + DL Y+ Sbjct 218 ----------VGGNLNFQMGAFVKDGE-FVYQYGTPPGRGGLVYLTRVPEKQMRDLNAYE 266 Query 452 YWNGDSNSWVPNKPDAATPVIPGPVGEMSVQYNTYLKQYLALYTNGMNDVVARTAPAPQG 511 YW+G WVP PD A P++ G VGE+SVQYN+YL QYL L T+ N VV R AP+P G Sbjct 267 YWDG--GKWVPKNPDVAAPIVFGGVGEISVQYNSYLGQYLMLTTDDHNSVVMRRAPSPTG 324 Query 512 PWSAEQMLVSSWQMPGGIYAPMMHPWSTGKDVYFNLSLWSAYNVMLMHTVL 562 PWSA ++L++ ++P +Y +HPWS+G D+YF ++ S YNV+LMHT L Sbjct 325 PWSAPEVLIAGPELP-SMYGAYIHPWSSGPDLYFLTTVHSNYNVLLMHTTL 374 >gi|325673176|ref|ZP_08152869.1| carbohydrate-binding protein [Rhodococcus equi ATCC 33707] gi|325556011|gb|EGD25680.1| carbohydrate-binding protein [Rhodococcus equi ATCC 33707] Length=315 Score = 270 bits (689), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 158/338 (47%), Positives = 203/338 (61%), Gaps = 32/338 (9%) Query 230 TGPDSPNKTLERFGISGTDLGIPWDNGDPANRQVLMIFGDTFGY-----CAVDGHQWRYN 284 TG S N+T + + GTDLGI WDNG N QVL FGDT G WR N Sbjct 5 TGLLSANRTQDS-NVLGTDLGIMWDNG---NGQVLTAFGDTAGLGIPNLLVGSLWSWRSN 60 Query 285 TLFRSQDRDLGNGVHVTSGDASNRYSGSPVRQPGFSKQLINSIKWARDETGIIPTAGIAV 344 LFRS DRDL +G+ + +P G SK+LI S K E IPTAGIA Sbjct 61 VLFRSSDRDLADGM---------TFDSTPRDIVGQSKELIPSPKIPFVEISRIPTAGIAA 111 Query 345 GKTQYVNFMSIRNWGRDGEWTTNYSGIAVSKDNGQTWGVFPGTIRASGPDSGGKARFVPG 404 QY++ MS++NWG G+W TNYS +A S DNG+ W T R V G Sbjct 112 DGMQYMSIMSVKNWGEPGKWETNYSSLAFSTDNGENWVEATETRRPP----------VGG 161 Query 405 NENFQMGAYLKSNDGYLYSFGTPPGRGGSAYLARVPQRFVPDLTKYQYWNGDSNSWVPNK 464 N NFQMGA++K + ++Y +GTPPGRGG YL RVP++ + DL Y+YW+G WVP Sbjct 162 NLNFQMGAFVKDGE-FVYQYGTPPGRGGLVYLTRVPEKQMRDLNAYEYWDG--GKWVPKN 218 Query 465 PDAATPVIPGPVGEMSVQYNTYLKQYLALYTNGMNDVVARTAPAPQGPWSAEQMLVSSWQ 524 PD A P++ G VGE+SVQYN+YL QYL L T+ N VV R AP+P GPWSA ++L++ + Sbjct 219 PDVAAPIVFGGVGEISVQYNSYLGQYLMLTTDDHNSVVMRRAPSPTGPWSAPEVLIAGPE 278 Query 525 MPGGIYAPMMHPWSTGKDVYFNLSLWSAYNVMLMHTVL 562 +P +Y +HPWS+G D+YF ++ S YNV+LMHT L Sbjct 279 LP-SMYGAYIHPWSSGPDLYFLTTVHSNYNVLLMHTTL 315 >gi|319950985|ref|ZP_08024856.1| hypothetical protein ES5_15243 [Dietzia cinnamea P4] gi|319435367|gb|EFV90616.1| hypothetical protein ES5_15243 [Dietzia cinnamea P4] Length=520 Score = 267 bits (682), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 153/361 (43%), Positives = 204/361 (57%), Gaps = 35/361 (9%) Query 223 TSLAEWVTGPDSPNKTLERFGISGTDLGIPWDNGDPANRQVLMIFGDTFGYCAVDGHQWR 282 T + VTGP SP++++ RFG+ GTDLGI WDNGDP +VLM FGDT G C V G QWR Sbjct 136 TRFEQLVTGPTSPSESVSRFGVGGTDLGIMWDNGDPDEPRVLMAFGDTMGDCTVPGTQWR 195 Query 283 YNTLFRSQDRDLGNGVHVTSGDASNRYSGSPVRQPGFSKQLINSIKWARDETGIIPTAGI 342 N LFRS D DL +G+ + S + + G +K ++ + T IIPTAGI Sbjct 196 SNVLFRSADTDLTDGITIDS---------AAMGADGLAKSIVPRSGLPGEVT-IIPTAGI 245 Query 343 AVGKTQYVNFMSIRNWGRDGEWTTNYSGIAVSKDNGQTWGVFPGTIR---ASGPDSGGKA 399 AV QY+ FMS+ +WG+ G WTTNYSG+A S D+G+ W V P R + P G Sbjct 246 AVNGVQYLRFMSVAHWGQPGSWTTNYSGLAYSTDDGENWTVVPSMARPITDTVPTGAGSP 305 Query 400 RFVPGNENFQMGAYLKSNDGYLYSFGTPPGRGGSAYLARVPQRFVP-------------- 445 QM ++L + D YLY + TP GR G A +ARVP P Sbjct 306 GVDAAWRGAQMSSFL-TTDEYLYEYLTPSGRQGGAIIARVPLDGSPGADDLDAPGAPPSA 364 Query 446 ---DLTKYQYWNGDSNSWVPNKPDAATPVIPGPVGEMSVQYNTYLKQYLALYTNGMNDVV 502 D Y+YW+G WV + AA V+P P E+S +N +L +Y A+Y+ G + VV Sbjct 365 GVLDPGAYEYWDG--TEWVSDI-RAARRVLPAPASEISTMWNEHLGKYTAMYSQGFDSVV 421 Query 503 ARTAPAPQGPWSAEQMLVSSWQMPGGIYAPMMHPWSTGKDVYFNLSLWSAYNVMLMHTVL 562 RTA P+GPWSA LV +P G+Y MHPW+ G+D+Y+ ++ W+AYNV L+ T L Sbjct 422 LRTADRPEGPWSAPTTLVDYSMLP-GVYGAFMHPWAQGEDLYYLVTTWNAYNVFLVRTRL 480 Query 563 P 563 P Sbjct 481 P 481 >gi|343925303|ref|ZP_08764828.1| hypothetical protein GOALK_040_00070 [Gordonia alkanivorans NBRC 16433] gi|343764742|dbj|GAA11754.1| hypothetical protein GOALK_040_00070 [Gordonia alkanivorans NBRC 16433] Length=435 Score = 260 bits (665), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 160/369 (44%), Positives = 216/369 (59%), Gaps = 35/369 (9%) Query 220 GATTSLAEWVTGPDSPNKTLERFGISGTDLGIPWDNGDPANRQVLMIFGDTFGYCAVDGH 279 G + + WVTGP S N T +RFGISGTDLGI WDNG Q LM FGDTFG C+V G Sbjct 73 GNISKVLSWVTGPRSNNDTYDRFGISGTDLGIAWDNG---RGQTLMAFGDTFGNCSVAGQ 129 Query 280 QWRYNTLFRSQDRDLGNG-VHVTSGDASNRYSGSPVR-QPGFSKQLINSIKWARDETGII 337 +WR+N L R+ D D +G + + G A + SG+ +R + ++++LI S+ A E I Sbjct 130 EWRHNVLLRTNDDDFTDGKITIPDGVAGDVNSGTVIRGRANYAEELIPSLGIANIEVTTI 189 Query 338 PTAGIAV----GKTQYVNFMSIRNWGRDGEWTTNYSGIAVSKDNGQTWGVFPGTIRASGP 393 PTA I++ G QY+N+MS+R+WG G W TNYSGIA S DNGQTW P TI + P Sbjct 190 PTAAISLPHDNGFRQYINYMSVRSWGSAGNWITNYSGIAYSDDNGQTWNSDPDTILINAP 249 Query 394 DS----GGKARFVPGNENFQMGAYLK-----SNDG-YLYSFGTPPGRGGSAYLARVPQRF 443 G N FQ AY++ +N+ Y+Y FGTP GR G+A+LAR Sbjct 250 IDLALPGNLRAIDVNNGKFQQNAYMRGRPDTANEAKYVYQFGTPNGRFGAAFLARFEPGD 309 Query 444 VPDLTKYQYWNGDSNSWVPNKP---DAATPVIPGPVGEMSVQYNTYLKQYLALYTNGMND 500 + +L Y+YW+G+ WV + D V+ PV E+SV ++ L +YL L +G N Sbjct 310 IRNLDNYEYWSGERIGWVDDISKIHDTEGVVVRQPVSELSVAWSPSLNKYLML--DGDNG 367 Query 501 VVARTAPAPQGPWSAEQMLVSSWQMPGG--IYAPMMHPWS-----TGKDVYFNLSLWSAY 553 + RTA P+GPWS+ + +V+ PG +Y PMM P S TGK++YFN S WS Y Sbjct 368 IRLRTADHPEGPWSSPRNIVA----PGNPVVYGPMMLPSSPALTGTGKELYFNASRWSDY 423 Query 554 NVMLMHTVL 562 NVML+ + L Sbjct 424 NVMLIRSDL 432 >gi|312140405|ref|YP_004007741.1| hypothetical protein REQ_30500 [Rhodococcus equi 103S] gi|311889744|emb|CBH49061.1| putative secreted protein [Rhodococcus equi 103S] Length=470 Score = 259 bits (663), Expect = 7e-67, Method: Compositional matrix adjust. Identities = 160/365 (44%), Positives = 214/365 (59%), Gaps = 38/365 (10%) Query 217 TLAGATTSLAEWVTGPDSPNKTLERFGISGTDLGIPWDNGDPANRQVLMIFGDTFGYCAV 276 L+G T +L E VTGP SPN T++RF ++GTDLGI WDNG QVLM FGDT G C + Sbjct 85 VLSGPTKAL-EMVTGPGSPNDTIDRFSVAGTDLGIMWDNGAG---QVLMAFGDTVGDCGI 140 Query 277 DGHQWRYNTLFRSQDRDLGNGVHVTSGDASNRYSGSPVRQPG--FSKQLINSIK----WA 330 DG QWR N LFRS D +L +G+ + S SP+ PG FS+Q+I + Sbjct 141 DGDQWRSNVLFRSNDANLTDGMRIDS---------SPLDTPGGNFSRQVIKGLLNLPPGT 191 Query 331 RDETGIIPTAGIAVGKTQYVNFMSIRNWGRDGEWTTNYSGIAVSKDNGQTWGVFPGTIRA 390 E +IPT G+AV QYV +MS+R+W GEWTTNYSG+A S DNG+ W P T+R Sbjct 192 MPEFTVIPTGGVAVDGVQYVRWMSVRSWDVPGEWTTNYSGLAFSTDNGENWTTDPATVRL 251 Query 391 S------GPDSGGKARFVPGNENFQMGAYL---KSNDGYLYSFGTPPGRGGSAYLARVPQ 441 + G D G N+N+QM A++ ++ Y+Y FGTP GR G A LARVP+ Sbjct 252 NREGVLDGLDLPGVPNLATSNKNWQMSAFVPGRGADSNYVYEFGTPSGRSGEARLARVPK 311 Query 442 RFVPDLTKYQYWNGDSNSWVPNKPDAATPVIPGPVGEMSVQYNTYLKQYLALYTNGMNDV 501 + +L Y+Y G + W + DA PVI G V E+SVQ+N YL +Y+A+YT+ M + Sbjct 312 ADIRNLNAYEYRTG--SGWSQDIADAV-PVIRGNVSELSVQWNPYLGKYVAMYTD-MGGL 367 Query 502 VARTAPAPQGPWSAEQMLVSSWQMPGGIYAPMMHPWS----TGKDVYFNLSLWSAYNVML 557 R + + WS Q L+ S +P +Y MHPW+ T K++YF L+ W YNV+ Sbjct 368 KIRQS-SDLINWSGTQTLIGSTALP-SLYGGFMHPWTNKNGTDKNLYFVLTTWDRYNVIY 425 Query 558 MHTVL 562 M T L Sbjct 426 MKTDL 430 >gi|262204393|ref|YP_003275601.1| hypothetical protein Gbro_4575 [Gordonia bronchialis DSM 43247] gi|262087740|gb|ACY23708.1| hypothetical protein Gbro_4575 [Gordonia bronchialis DSM 43247] Length=429 Score = 259 bits (663), Expect = 8e-67, Method: Compositional matrix adjust. Identities = 152/342 (45%), Positives = 212/342 (62%), Gaps = 16/342 (4%) Query 226 AEWVTGPDSPNKTLERFGISGTDLGIPWDNGDPANRQVLMIFGDTFGYCAVDGHQWRYNT 285 EWVTGP SPN T +RF I+ TD+G+ WDNG QVLM FGDT+G CA WR+NT Sbjct 95 VEWVTGPRSPNHTDKRFSITATDVGVMWDNGSG---QVLMAFGDTWGKCAGQ-MVWRHNT 150 Query 286 LFRSQ-DRDLGNGVHVTSGDASNRYSGSPV--RQPGFSKQLINSIKWARDETGIIPTAGI 342 + RS + DL G+ + SG+ V + P F++ ++N++ E G IPT GI Sbjct 151 MLRSNGNADLDKGITFPDAIPGSVRSGASVTPQHPTFAQPMMNAVAVRNIEVGRIPTGGI 210 Query 343 AVGKTQYVNFMSIRNWGRDGEWTTNYSGIAVSKDNGQTWGVFPGTIRASGPDSG--GKAR 400 ++G Q++++MSI W G W TN+S IAVS +NGQTW TIRA+ D G G + Sbjct 211 SLGGVQFMSYMSIHRWTGPGTWETNFSAIAVSHNNGQTWTTNNNTIRAN-LDLGIPGVPQ 269 Query 401 FVPGNENFQMGAYLKSNDGYLYSFGTPPGRGGSAYLARVPQRFVPDLTKYQYWNGDSNSW 460 G+ FQMGA+L+S Y+Y +GTP GR G+A+++RV + DL +Y+Y+ N W Sbjct 270 VQRGHGRFQMGAFLRSGS-YIYQYGTPNGRRGAAFISRVLPADILDLNRYEYF--ALNRW 326 Query 461 VPNKPDAATPVIPGPVGEMSVQYNTYLKQYLALYTNGMNDVVARTAPAPQGPWSAEQMLV 520 P+ P AA P++ PV EMSV YN +L +++ L T ++ RTAP P GPWS E++++ Sbjct 327 SPD-PFAAVPIVRAPVSEMSVAYNNFLGKFVML-TERAGTIMLRTAPNPAGPWSGERVVI 384 Query 521 SSWQMPGGIYAPMMHPWSTGKDVYFNLSLWSAYNVMLMHTVL 562 + Q G+YAP +HP STG+ +YF S W YNVML+ T L Sbjct 385 PARQ-SAGLYAPYIHPRSTGQMLYFVASRWDDYNVMLIRTDL 425 >gi|325675985|ref|ZP_08155668.1| hypothetical protein HMPREF0724_13450 [Rhodococcus equi ATCC 33707] gi|325553223|gb|EGD22902.1| hypothetical protein HMPREF0724_13450 [Rhodococcus equi ATCC 33707] Length=474 Score = 257 bits (657), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 158/365 (44%), Positives = 213/365 (59%), Gaps = 38/365 (10%) Query 217 TLAGATTSLAEWVTGPDSPNKTLERFGISGTDLGIPWDNGDPANRQVLMIFGDTFGYCAV 276 L+G T +L E VTGP SPN T++RF ++GTDLGI WDNG QVLM FGDT G C + Sbjct 89 VLSGPTKAL-EMVTGPGSPNDTIDRFSVAGTDLGIMWDNGAG---QVLMAFGDTVGDCGI 144 Query 277 DGHQWRYNTLFRSQDRDLGNGVHVTSGDASNRYSGSPVRQPG--FSKQLINSIK----WA 330 DG QWR N LFRS D +L +G+ + S SP+ PG FS+Q+I + Sbjct 145 DGDQWRSNVLFRSNDANLADGMRIDS---------SPLDTPGGNFSRQVIKGLLNLPPGT 195 Query 331 RDETGIIPTAGIAVGKTQYVNFMSIRNWGRDGEWTTNYSGIAVSKDNGQTWGVFPGTIRA 390 E +IPT G+AV QYV +MS+R+W GEWTTNYSG+A S DNG+ W P T+R Sbjct 196 MPEFTVIPTGGVAVDGVQYVRWMSVRSWDVPGEWTTNYSGLAFSTDNGENWTTDPATVRL 255 Query 391 S------GPDSGGKARFVPGNENFQMGAYL---KSNDGYLYSFGTPPGRGGSAYLARVPQ 441 + G D N+N+QM A++ ++ Y+Y FGTP GR G A LARVP+ Sbjct 256 NREGVLDGLDLPDVPNLATSNKNWQMSAFVPGRGADSNYVYEFGTPSGRSGEARLARVPK 315 Query 442 RFVPDLTKYQYWNGDSNSWVPNKPDAATPVIPGPVGEMSVQYNTYLKQYLALYTNGMNDV 501 + +L Y+Y ++ W N DA PVI G V E+SVQ+N YL +Y+++YT+ M + Sbjct 316 ADIRNLNAYEYRT--NSGWSHNIADAV-PVIRGNVSELSVQWNPYLNKYVSMYTD-MGGL 371 Query 502 VARTAPAPQGPWSAEQMLVSSWQMPGGIYAPMMHPWS----TGKDVYFNLSLWSAYNVML 557 R + + WS Q L+ S +P +Y MHPW+ T K++YF L+ W YNV+ Sbjct 372 KIRQS-SDLINWSGTQTLIGSTALP-SLYGGFMHPWTNKNGTDKNLYFVLTTWDRYNVIY 429 Query 558 MHTVL 562 M T L Sbjct 430 MKTDL 434 Lambda K H 0.316 0.134 0.431 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1258839720204 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40