BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv1759c

Length=914
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|57116905|ref|YP_177831.1|  PE-PGRS family protein [Mycobacteri...  1458    0.0  
gi|344219580|gb|AEN00211.1|  PE-PGRS family protein [Mycobacteriu...  1456    0.0  
gi|289554468|ref|ZP_06443678.1|  predicted protein [Mycobacterium...  1451    0.0  
gi|253799200|ref|YP_003032201.1|  PE-PGRS family protein [Mycobac...  1447    0.0  
gi|297634316|ref|ZP_06952096.1|  PE-PGRS family protein [Mycobact...   167    1e-38
gi|339294426|gb|AEJ46537.1|  putative PE family protein [Mycobact...   138    5e-30
gi|339631517|ref|YP_004723159.1|  PE-PGRS family protein [Mycobac...   136    2e-29
gi|31792644|ref|NP_855137.1|  PE-PGRS family protein [Mycobacteri...   136    2e-29
gi|183984370|ref|YP_001852661.1|  PE-PGRS family protein [Mycobac...   135    3e-29
gi|339298064|gb|AEJ50174.1|  putative PE family protein [Mycobact...   135    3e-29
gi|183982116|ref|YP_001850407.1|  PE-PGRS family protein [Mycobac...   134    5e-29
gi|183981229|ref|YP_001849520.1|  PE-PGRS family protein [Mycobac...   130    1e-27
gi|183981230|ref|YP_001849521.1|  PE-PGRS family protein [Mycobac...   129    2e-27
gi|340626466|ref|YP_004744918.1|  PE-PGRS family protein [Mycobac...   129    3e-27
gi|253797511|ref|YP_003030512.1|  PE-PGRS family protein [Mycobac...   129    3e-27
gi|340628625|ref|YP_004747077.1|  PE-PGRS family protein [Mycobac...   129    3e-27
gi|289552831|ref|ZP_06442041.1|  LOW QUALITY PROTEIN: predicted p...   129    4e-27
gi|183982114|ref|YP_001850405.1|  PE-PGRS family protein [Mycobac...   128    4e-27
gi|253799501|ref|YP_003032502.1|  hypothetical protein TBMG_02531...   128    6e-27
gi|183983306|ref|YP_001851597.1|  PE-PGRS family protein [Mycobac...   127    7e-27
gi|183982951|ref|YP_001851242.1|  PE-PGRS family protein [Mycobac...   127    7e-27
gi|183985312|ref|YP_001853603.1|  PE-PGRS family protein [Mycobac...   127    8e-27
gi|57116865|ref|YP_177812.1|  PE-PGRS family protein [Mycobacteri...   127    1e-26
gi|15840909|ref|NP_335946.1|  PE_PGRS family protein [Mycobacteri...   127    1e-26
gi|148661242|ref|YP_001282765.1|  PE-PGRS family protein [Mycobac...   126    2e-26
gi|148822669|ref|YP_001287423.1|  PE-PGRS family protein [Mycobac...   126    2e-26
gi|183985012|ref|YP_001853303.1|  PE-PGRS family protein [Mycobac...   125    3e-26
gi|253797204|ref|YP_003030205.1|  PE-PGRS family protein [Mycobac...   125    4e-26
gi|183982702|ref|YP_001850993.1|  PE-PGRS family protein, PE_PGRS...   123    1e-25
gi|328456993|gb|AEB02416.1|  PE family protein [Mycobacterium tub...   123    1e-25
gi|31791457|ref|NP_853950.1|  PE-PGRS family protein [Mycobacteri...   122    2e-25
gi|148660044|ref|YP_001281567.1|  PE-PGRS family protein [Mycobac...   122    2e-25
gi|57116712|ref|YP_177707.1|  PE-PGRS family protein [Mycobacteri...   122    3e-25
gi|253797205|ref|YP_003030206.1|  hypothetical protein TBMG_00283...   122    3e-25
gi|121636193|ref|YP_976416.1|  PE-PGRS family protein [Mycobacter...   122    3e-25
gi|148821476|ref|YP_001286230.1|  PE-PGRS family protein [Mycobac...   122    4e-25
gi|224988667|ref|YP_002643354.1|  PE-PGRS family protein [Mycobac...   120    8e-25
gi|121636194|ref|YP_976417.1|  PE-PGRS family protein [Mycobacter...   120    1e-24
gi|121636192|ref|YP_976415.1|  PE-PGRS family protein [Mycobacter...   120    1e-24
gi|31791458|ref|NP_853951.1|  PE-PGRS family protein [Mycobacteri...   120    2e-24
gi|31791456|ref|NP_853949.1|  hypothetical protein Mb0285c [Mycob...   119    3e-24
gi|183981609|ref|YP_001849900.1|  PE-PGRS family protein [Mycobac...   117    8e-24
gi|118618448|ref|YP_906780.1|  PE-PGRS family protein [Mycobacter...   117    1e-23
gi|339293336|gb|AEJ45447.1|  PE-PGRS family protein [Mycobacteriu...   117    1e-23
gi|340625315|ref|YP_004743767.1|  PE-PGRS family protein [Mycobac...   117    1e-23
gi|341603451|emb|CCC66132.1|  PE-PGRS family protein [Mycobacteri...   117    1e-23
gi|224991926|ref|YP_002646615.1|  PE-PGRS family protein [Mycobac...   117    1e-23
gi|121639430|ref|YP_979654.1|  PE-PGRS family protein [Mycobacter...   116    2e-23
gi|31794687|ref|NP_857180.1|  PE-PGRS family protein [Mycobacteri...   116    2e-23
gi|339633513|ref|YP_004725155.1|  PE-PGRS family protein [Mycobac...   116    2e-23


>gi|57116905|ref|YP_177831.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv]
 gi|61249984|sp|P0A686.1|WA22_MYCTU RecName: Full=WAG22 antigen; Flags: Precursor
 gi|61249985|sp|P0A687.1|WA22_MYCBO RecName: Full=WAG22 antigen; Flags: Precursor
 gi|38684054|emb|CAE55417.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv]
Length=914

 Score = 1458 bits (3775),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 914/914 (100%), Positives = 914/914 (100%), Gaps = 0/914 (0%)

Query  1    MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR  60
            MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR
Sbjct  1    MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR  60

Query  61   AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPLLNSINAPVLAATGRPLIGNGAN  120
            AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPLLNSINAPVLAATGRPLIGNGAN
Sbjct  61   AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPLLNSINAPVLAATGRPLIGNGAN  120

Query  121  GAPGTGANGGDAGWLIGNGGAGGSGAKGANGGAGGPGGAAGLFGNGGAGGAGGTATANNG  180
            GAPGTGANGGDAGWLIGNGGAGGSGAKGANGGAGGPGGAAGLFGNGGAGGAGGTATANNG
Sbjct  121  GAPGTGANGGDAGWLIGNGGAGGSGAKGANGGAGGPGGAAGLFGNGGAGGAGGTATANNG  180

Query  181  IGGAGGAGGSAMLFGAGGAGGAGGAATSLVGGIGGTGGTGGNAGMLAGAAGAGGAGGFSF  240
            IGGAGGAGGSAMLFGAGGAGGAGGAATSLVGGIGGTGGTGGNAGMLAGAAGAGGAGGFSF
Sbjct  181  IGGAGGAGGSAMLFGAGGAGGAGGAATSLVGGIGGTGGTGGNAGMLAGAAGAGGAGGFSF  240

Query  241  STAGGAGGAGGAGGLFTTGGVGGAGGQGHTGGAGGAGGAGGLFGAGGMGGAGGFGDHGTL  300
            STAGGAGGAGGAGGLFTTGGVGGAGGQGHTGGAGGAGGAGGLFGAGGMGGAGGFGDHGTL
Sbjct  241  STAGGAGGAGGAGGLFTTGGVGGAGGQGHTGGAGGAGGAGGLFGAGGMGGAGGFGDHGTL  300

Query  301  GTGGAGGDGGGGGLFGAGGDGGAGGSGLTTGGAAGNGGNAGTLSLGAAGGAGGTGGAGGT  360
            GTGGAGGDGGGGGLFGAGGDGGAGGSGLTTGGAAGNGGNAGTLSLGAAGGAGGTGGAGGT
Sbjct  301  GTGGAGGDGGGGGLFGAGGDGGAGGSGLTTGGAAGNGGNAGTLSLGAAGGAGGTGGAGGT  360

Query  361  VFGGGKGGAGGAGGNAGMLFGSGGGGGTGGFGFAAGGQGGVGGSAGMLSGSGGSGGAGGS  420
            VFGGGKGGAGGAGGNAGMLFGSGGGGGTGGFGFAAGGQGGVGGSAGMLSGSGGSGGAGGS
Sbjct  361  VFGGGKGGAGGAGGNAGMLFGSGGGGGTGGFGFAAGGQGGVGGSAGMLSGSGGSGGAGGS  420

Query  421  GGPAGTAAGGAGGAGGAPGLIGNGGNGGNGGESGGTGGVGGAGGNAVLIGNGGEGGIGAL  480
            GGPAGTAAGGAGGAGGAPGLIGNGGNGGNGGESGGTGGVGGAGGNAVLIGNGGEGGIGAL
Sbjct  421  GGPAGTAAGGAGGAGGAPGLIGNGGNGGNGGESGGTGGVGGAGGNAVLIGNGGEGGIGAL  480

Query  481  AGKSGFGGFGGLLLGADGYNAPESTSPWHNLQQDILSFINEPTEALTGRPLIGNGDSGTP  540
            AGKSGFGGFGGLLLGADGYNAPESTSPWHNLQQDILSFINEPTEALTGRPLIGNGDSGTP
Sbjct  481  AGKSGFGGFGGLLLGADGYNAPESTSPWHNLQQDILSFINEPTEALTGRPLIGNGDSGTP  540

Query  541  GTGDDGGAGGWLFGNGGNGGAGAAGTNGSAGGAGGAGGILFGTGGAGGAGGVGTAGAGGA  600
            GTGDDGGAGGWLFGNGGNGGAGAAGTNGSAGGAGGAGGILFGTGGAGGAGGVGTAGAGGA
Sbjct  541  GTGDDGGAGGWLFGNGGNGGAGAAGTNGSAGGAGGAGGILFGTGGAGGAGGVGTAGAGGA  600

Query  601  GGAGGSAFLIGSGGTGGVGGAATTTGGVGGAGGNAGLLIGAAGLGGCGGGAFTAGVTTGG  660
            GGAGGSAFLIGSGGTGGVGGAATTTGGVGGAGGNAGLLIGAAGLGGCGGGAFTAGVTTGG
Sbjct  601  GGAGGSAFLIGSGGTGGVGGAATTTGGVGGAGGNAGLLIGAAGLGGCGGGAFTAGVTTGG  660

Query  661  AGGTGGAAGLFANGGAGGAGGTGSTAGGAGGAGGAGGLYAHGGTGGPGGNGGSTGAGGTG  720
            AGGTGGAAGLFANGGAGGAGGTGSTAGGAGGAGGAGGLYAHGGTGGPGGNGGSTGAGGTG
Sbjct  661  AGGTGGAAGLFANGGAGGAGGTGSTAGGAGGAGGAGGLYAHGGTGGPGGNGGSTGAGGTG  720

Query  721  GAGGPGGLYGAGGSGGAGGHGGMAGGGGGVGGNAGSLTLNASGGAGGSGGSSLSGKAGAG  780
            GAGGPGGLYGAGGSGGAGGHGGMAGGGGGVGGNAGSLTLNASGGAGGSGGSSLSGKAGAG
Sbjct  721  GAGGPGGLYGAGGSGGAGGHGGMAGGGGGVGGNAGSLTLNASGGAGGSGGSSLSGKAGAG  780

Query  781  GAGGSAGLFYGSGGAGGNGGYSLNGTGGDGGTGGAGQITGLRSGFGGAGGAGGASDTGAG  840
            GAGGSAGLFYGSGGAGGNGGYSLNGTGGDGGTGGAGQITGLRSGFGGAGGAGGASDTGAG
Sbjct  781  GAGGSAGLFYGSGGAGGNGGYSLNGTGGDGGTGGAGQITGLRSGFGGAGGAGGASDTGAG  840

Query  841  GNGGAGGKAGLYGNGGDGGAGGDGATSGKGGAGGNAVVIGNGGNGGNAGKAGGTAGAGGA  900
            GNGGAGGKAGLYGNGGDGGAGGDGATSGKGGAGGNAVVIGNGGNGGNAGKAGGTAGAGGA
Sbjct  841  GNGGAGGKAGLYGNGGDGGAGGDGATSGKGGAGGNAVVIGNGGNGGNAGKAGGTAGAGGA  900

Query  901  GGLVLGRDGQHGLT  914
            GGLVLGRDGQHGLT
Sbjct  901  GGLVLGRDGQHGLT  914


>gi|344219580|gb|AEN00211.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2]
Length=914

 Score = 1456 bits (3768),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 913/914 (99%), Positives = 913/914 (99%), Gaps = 0/914 (0%)

Query  1    MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR  60
            MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR
Sbjct  1    MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR  60

Query  61   AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPLLNSINAPVLAATGRPLIGNGAN  120
            AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPLLNSINAPVLAATGRPLIGNGAN
Sbjct  61   AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPLLNSINAPVLAATGRPLIGNGAN  120

Query  121  GAPGTGANGGDAGWLIGNGGAGGSGAKGANGGAGGPGGAAGLFGNGGAGGAGGTATANNG  180
            GAPGTGANGGDAGWLIGNGGAGGSGAKGANGGAGGPGGAAGLFGNGGAGGAGGTATANNG
Sbjct  121  GAPGTGANGGDAGWLIGNGGAGGSGAKGANGGAGGPGGAAGLFGNGGAGGAGGTATANNG  180

Query  181  IGGAGGAGGSAMLFGAGGAGGAGGAATSLVGGIGGTGGTGGNAGMLAGAAGAGGAGGFSF  240
            IGGAGGAGGSAMLFGAGGAGGAGGAATSLVGGIGGTGGTGGNAGMLAGAAGAGGAGGFSF
Sbjct  181  IGGAGGAGGSAMLFGAGGAGGAGGAATSLVGGIGGTGGTGGNAGMLAGAAGAGGAGGFSF  240

Query  241  STAGGAGGAGGAGGLFTTGGVGGAGGQGHTGGAGGAGGAGGLFGAGGMGGAGGFGDHGTL  300
            STAGGAGGAGGAGGLFTTGGVGGAGGQGHTGGAGGAGGAGGLFGAGGMGGAGGFGDHGTL
Sbjct  241  STAGGAGGAGGAGGLFTTGGVGGAGGQGHTGGAGGAGGAGGLFGAGGMGGAGGFGDHGTL  300

Query  301  GTGGAGGDGGGGGLFGAGGDGGAGGSGLTTGGAAGNGGNAGTLSLGAAGGAGGTGGAGGT  360
            GTGGAGGDGGGGGLFGAGGDGGAGGSGLTTGGAAGNGGNAGTLSLGAAGGAGGTGGAGGT
Sbjct  301  GTGGAGGDGGGGGLFGAGGDGGAGGSGLTTGGAAGNGGNAGTLSLGAAGGAGGTGGAGGT  360

Query  361  VFGGGKGGAGGAGGNAGMLFGSGGGGGTGGFGFAAGGQGGVGGSAGMLSGSGGSGGAGGS  420
            VFGGGKGGAGGAGGNAGMLFGSGGGGGTGGFGFAAGGQGGVGGSAGMLSGSGGSGGAGGS
Sbjct  361  VFGGGKGGAGGAGGNAGMLFGSGGGGGTGGFGFAAGGQGGVGGSAGMLSGSGGSGGAGGS  420

Query  421  GGPAGTAAGGAGGAGGAPGLIGNGGNGGNGGESGGTGGVGGAGGNAVLIGNGGEGGIGAL  480
            GGPAGTAAGGAGGAGGAPGLIGNGGNGGNGGESGGTGGVGGAGGNAVLIGNGGEGGIGAL
Sbjct  421  GGPAGTAAGGAGGAGGAPGLIGNGGNGGNGGESGGTGGVGGAGGNAVLIGNGGEGGIGAL  480

Query  481  AGKSGFGGFGGLLLGADGYNAPESTSPWHNLQQDILSFINEPTEALTGRPLIGNGDSGTP  540
            AGKSGFGGFGGLLLGADGYNAPESTSPWHNLQQDILSFINEPTEALTGRPLIGNGDSGTP
Sbjct  481  AGKSGFGGFGGLLLGADGYNAPESTSPWHNLQQDILSFINEPTEALTGRPLIGNGDSGTP  540

Query  541  GTGDDGGAGGWLFGNGGNGGAGAAGTNGSAGGAGGAGGILFGTGGAGGAGGVGTAGAGGA  600
            GTGDDGGAGGWL GNGGNGGAGAAGTNGSAGGAGGAGGILFGTGGAGGAGGVGTAGAGGA
Sbjct  541  GTGDDGGAGGWLLGNGGNGGAGAAGTNGSAGGAGGAGGILFGTGGAGGAGGVGTAGAGGA  600

Query  601  GGAGGSAFLIGSGGTGGVGGAATTTGGVGGAGGNAGLLIGAAGLGGCGGGAFTAGVTTGG  660
            GGAGGSAFLIGSGGTGGVGGAATTTGGVGGAGGNAGLLIGAAGLGGCGGGAFTAGVTTGG
Sbjct  601  GGAGGSAFLIGSGGTGGVGGAATTTGGVGGAGGNAGLLIGAAGLGGCGGGAFTAGVTTGG  660

Query  661  AGGTGGAAGLFANGGAGGAGGTGSTAGGAGGAGGAGGLYAHGGTGGPGGNGGSTGAGGTG  720
            AGGTGGAAGLFANGGAGGAGGTGSTAGGAGGAGGAGGLYAHGGTGGPGGNGGSTGAGGTG
Sbjct  661  AGGTGGAAGLFANGGAGGAGGTGSTAGGAGGAGGAGGLYAHGGTGGPGGNGGSTGAGGTG  720

Query  721  GAGGPGGLYGAGGSGGAGGHGGMAGGGGGVGGNAGSLTLNASGGAGGSGGSSLSGKAGAG  780
            GAGGPGGLYGAGGSGGAGGHGGMAGGGGGVGGNAGSLTLNASGGAGGSGGSSLSGKAGAG
Sbjct  721  GAGGPGGLYGAGGSGGAGGHGGMAGGGGGVGGNAGSLTLNASGGAGGSGGSSLSGKAGAG  780

Query  781  GAGGSAGLFYGSGGAGGNGGYSLNGTGGDGGTGGAGQITGLRSGFGGAGGAGGASDTGAG  840
            GAGGSAGLFYGSGGAGGNGGYSLNGTGGDGGTGGAGQITGLRSGFGGAGGAGGASDTGAG
Sbjct  781  GAGGSAGLFYGSGGAGGNGGYSLNGTGGDGGTGGAGQITGLRSGFGGAGGAGGASDTGAG  840

Query  841  GNGGAGGKAGLYGNGGDGGAGGDGATSGKGGAGGNAVVIGNGGNGGNAGKAGGTAGAGGA  900
            GNGGAGGKAGLYGNGGDGGAGGDGATSGKGGAGGNAVVIGNGGNGGNAGKAGGTAGAGGA
Sbjct  841  GNGGAGGKAGLYGNGGDGGAGGDGATSGKGGAGGNAVVIGNGGNGGNAGKAGGTAGAGGA  900

Query  901  GGLVLGRDGQHGLT  914
            GGLVLGRDGQHGLT
Sbjct  901  GGLVLGRDGQHGLT  914


>gi|289554468|ref|ZP_06443678.1| predicted protein [Mycobacterium tuberculosis KZN 605]
 gi|289439100|gb|EFD21593.1| predicted protein [Mycobacterium tuberculosis KZN 605]
Length=954

 Score = 1451 bits (3756),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 913/914 (99%), Positives = 913/914 (99%), Gaps = 0/914 (0%)

Query  1    MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR  60
            MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR
Sbjct  41   MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR  100

Query  61   AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPLLNSINAPVLAATGRPLIGNGAN  120
            AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPLLNSINAPVLAATGRPLIGNGAN
Sbjct  101  AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPLLNSINAPVLAATGRPLIGNGAN  160

Query  121  GAPGTGANGGDAGWLIGNGGAGGSGAKGANGGAGGPGGAAGLFGNGGAGGAGGTATANNG  180
            GAPGTGANGGDAGWLIGNGGAGGSGAKGANGGAGGPGGAAGLFGNGGAGGAGGTATANNG
Sbjct  161  GAPGTGANGGDAGWLIGNGGAGGSGAKGANGGAGGPGGAAGLFGNGGAGGAGGTATANNG  220

Query  181  IGGAGGAGGSAMLFGAGGAGGAGGAATSLVGGIGGTGGTGGNAGMLAGAAGAGGAGGFSF  240
            IGGAGGAGGSAMLFGAGGAGGAGGAATSLVGGIGGTGGTGGNAGMLAGAAGAGGAGGFSF
Sbjct  221  IGGAGGAGGSAMLFGAGGAGGAGGAATSLVGGIGGTGGTGGNAGMLAGAAGAGGAGGFSF  280

Query  241  STAGGAGGAGGAGGLFTTGGVGGAGGQGHTGGAGGAGGAGGLFGAGGMGGAGGFGDHGTL  300
            STAGGAGGAGGAGGLFTTGGVGGAGGQGHTGGAGGAGGAGGLFGAGGMGGAGGFGDHGTL
Sbjct  281  STAGGAGGAGGAGGLFTTGGVGGAGGQGHTGGAGGAGGAGGLFGAGGMGGAGGFGDHGTL  340

Query  301  GTGGAGGDGGGGGLFGAGGDGGAGGSGLTTGGAAGNGGNAGTLSLGAAGGAGGTGGAGGT  360
            GTGGAGGDGGGGGLFGAGGDGGAGGSGLTTGGAAGNGGNAGTLSLGAAGGAGGTGGAGGT
Sbjct  341  GTGGAGGDGGGGGLFGAGGDGGAGGSGLTTGGAAGNGGNAGTLSLGAAGGAGGTGGAGGT  400

Query  361  VFGGGKGGAGGAGGNAGMLFGSGGGGGTGGFGFAAGGQGGVGGSAGMLSGSGGSGGAGGS  420
            VFGGGKGGAGGAGGNAGMLFGSGGGGGTGGFGFAAGGQGGVGGSAGMLSGSGGSGGAGGS
Sbjct  401  VFGGGKGGAGGAGGNAGMLFGSGGGGGTGGFGFAAGGQGGVGGSAGMLSGSGGSGGAGGS  460

Query  421  GGPAGTAAGGAGGAGGAPGLIGNGGNGGNGGESGGTGGVGGAGGNAVLIGNGGEGGIGAL  480
            GGPAGTAAGGAGGAGGAPGLIGNGGNGGNGGESGGTGGVGGAGGNAVLIGNGGEGGIGAL
Sbjct  461  GGPAGTAAGGAGGAGGAPGLIGNGGNGGNGGESGGTGGVGGAGGNAVLIGNGGEGGIGAL  520

Query  481  AGKSGFGGFGGLLLGADGYNAPESTSPWHNLQQDILSFINEPTEALTGRPLIGNGDSGTP  540
            AGKSGFGGFGGLLLGADGYNAPESTSPWHNLQQDILSFINEPTEALTGRPLIGNGDSGTP
Sbjct  521  AGKSGFGGFGGLLLGADGYNAPESTSPWHNLQQDILSFINEPTEALTGRPLIGNGDSGTP  580

Query  541  GTGDDGGAGGWLFGNGGNGGAGAAGTNGSAGGAGGAGGILFGTGGAGGAGGVGTAGAGGA  600
            GTGDDGGAGGWL GNGGNGGAGAAGTNGSAGGAGGAGGILFGTGGAGGAGGVGTAGAGGA
Sbjct  581  GTGDDGGAGGWLLGNGGNGGAGAAGTNGSAGGAGGAGGILFGTGGAGGAGGVGTAGAGGA  640

Query  601  GGAGGSAFLIGSGGTGGVGGAATTTGGVGGAGGNAGLLIGAAGLGGCGGGAFTAGVTTGG  660
            GGAGGSAFLIGSGGTGGVGGAATTTGGVGGAGGNAGLLIGAAGLGGCGGGAFTAGVTTGG
Sbjct  641  GGAGGSAFLIGSGGTGGVGGAATTTGGVGGAGGNAGLLIGAAGLGGCGGGAFTAGVTTGG  700

Query  661  AGGTGGAAGLFANGGAGGAGGTGSTAGGAGGAGGAGGLYAHGGTGGPGGNGGSTGAGGTG  720
            AGGTGGAAGLFANGGAGGAGGTGSTAGGAGGAGGAGGLYAHGGTGGPGGNGGSTGAGGTG
Sbjct  701  AGGTGGAAGLFANGGAGGAGGTGSTAGGAGGAGGAGGLYAHGGTGGPGGNGGSTGAGGTG  760

Query  721  GAGGPGGLYGAGGSGGAGGHGGMAGGGGGVGGNAGSLTLNASGGAGGSGGSSLSGKAGAG  780
            GAGGPGGLYGAGGSGGAGGHGGMAGGGGGVGGNAGSLTLNASGGAGGSGGSSLSGKAGAG
Sbjct  761  GAGGPGGLYGAGGSGGAGGHGGMAGGGGGVGGNAGSLTLNASGGAGGSGGSSLSGKAGAG  820

Query  781  GAGGSAGLFYGSGGAGGNGGYSLNGTGGDGGTGGAGQITGLRSGFGGAGGAGGASDTGAG  840
            GAGGSAGLFYGSGGAGGNGGYSLNGTGGDGGTGGAGQITGLRSGFGGAGGAGGASDTGAG
Sbjct  821  GAGGSAGLFYGSGGAGGNGGYSLNGTGGDGGTGGAGQITGLRSGFGGAGGAGGASDTGAG  880

Query  841  GNGGAGGKAGLYGNGGDGGAGGDGATSGKGGAGGNAVVIGNGGNGGNAGKAGGTAGAGGA  900
            GNGGAGGKAGLYGNGGDGGAGGDGATSGKGGAGGNAVVIGNGGNGGNAGKAGGTAGAGGA
Sbjct  881  GNGGAGGKAGLYGNGGDGGAGGDGATSGKGGAGGNAVVIGNGGNGGNAGKAGGTAGAGGA  940

Query  901  GGLVLGRDGQHGLT  914
            GGLVLGRDGQHGLT
Sbjct  941  GGLVLGRDGQHGLT  954


>gi|253799200|ref|YP_003032201.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
 gi|253320703|gb|ACT25306.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
 gi|328458955|gb|AEB04378.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207]
Length=950

 Score = 1447 bits (3746),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 913/914 (99%), Positives = 913/914 (99%), Gaps = 0/914 (0%)

Query  1    MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR  60
            MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR
Sbjct  37   MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR  96

Query  61   AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPLLNSINAPVLAATGRPLIGNGAN  120
            AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPLLNSINAPVLAATGRPLIGNGAN
Sbjct  97   AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPLLNSINAPVLAATGRPLIGNGAN  156

Query  121  GAPGTGANGGDAGWLIGNGGAGGSGAKGANGGAGGPGGAAGLFGNGGAGGAGGTATANNG  180
            GAPGTGANGGDAGWLIGNGGAGGSGAKGANGGAGGPGGAAGLFGNGGAGGAGGTATANNG
Sbjct  157  GAPGTGANGGDAGWLIGNGGAGGSGAKGANGGAGGPGGAAGLFGNGGAGGAGGTATANNG  216

Query  181  IGGAGGAGGSAMLFGAGGAGGAGGAATSLVGGIGGTGGTGGNAGMLAGAAGAGGAGGFSF  240
            IGGAGGAGGSAMLFGAGGAGGAGGAATSLVGGIGGTGGTGGNAGMLAGAAGAGGAGGFSF
Sbjct  217  IGGAGGAGGSAMLFGAGGAGGAGGAATSLVGGIGGTGGTGGNAGMLAGAAGAGGAGGFSF  276

Query  241  STAGGAGGAGGAGGLFTTGGVGGAGGQGHTGGAGGAGGAGGLFGAGGMGGAGGFGDHGTL  300
            STAGGAGGAGGAGGLFTTGGVGGAGGQGHTGGAGGAGGAGGLFGAGGMGGAGGFGDHGTL
Sbjct  277  STAGGAGGAGGAGGLFTTGGVGGAGGQGHTGGAGGAGGAGGLFGAGGMGGAGGFGDHGTL  336

Query  301  GTGGAGGDGGGGGLFGAGGDGGAGGSGLTTGGAAGNGGNAGTLSLGAAGGAGGTGGAGGT  360
            GTGGAGGDGGGGGLFGAGGDGGAGGSGLTTGGAAGNGGNAGTLSLGAAGGAGGTGGAGGT
Sbjct  337  GTGGAGGDGGGGGLFGAGGDGGAGGSGLTTGGAAGNGGNAGTLSLGAAGGAGGTGGAGGT  396

Query  361  VFGGGKGGAGGAGGNAGMLFGSGGGGGTGGFGFAAGGQGGVGGSAGMLSGSGGSGGAGGS  420
            VFGGGKGGAGGAGGNAGMLFGSGGGGGTGGFGFAAGGQGGVGGSAGMLSGSGGSGGAGGS
Sbjct  397  VFGGGKGGAGGAGGNAGMLFGSGGGGGTGGFGFAAGGQGGVGGSAGMLSGSGGSGGAGGS  456

Query  421  GGPAGTAAGGAGGAGGAPGLIGNGGNGGNGGESGGTGGVGGAGGNAVLIGNGGEGGIGAL  480
            GGPAGTAAGGAGGAGGAPGLIGNGGNGGNGGESGGTGGVGGAGGNAVLIGNGGEGGIGAL
Sbjct  457  GGPAGTAAGGAGGAGGAPGLIGNGGNGGNGGESGGTGGVGGAGGNAVLIGNGGEGGIGAL  516

Query  481  AGKSGFGGFGGLLLGADGYNAPESTSPWHNLQQDILSFINEPTEALTGRPLIGNGDSGTP  540
            AGKSGFGGFGGLLLGADGYNAPESTSPWHNLQQDILSFINEPTEALTGRPLIGNGDSGTP
Sbjct  517  AGKSGFGGFGGLLLGADGYNAPESTSPWHNLQQDILSFINEPTEALTGRPLIGNGDSGTP  576

Query  541  GTGDDGGAGGWLFGNGGNGGAGAAGTNGSAGGAGGAGGILFGTGGAGGAGGVGTAGAGGA  600
            GTGDDGGAGGWL GNGGNGGAGAAGTNGSAGGAGGAGGILFGTGGAGGAGGVGTAGAGGA
Sbjct  577  GTGDDGGAGGWLLGNGGNGGAGAAGTNGSAGGAGGAGGILFGTGGAGGAGGVGTAGAGGA  636

Query  601  GGAGGSAFLIGSGGTGGVGGAATTTGGVGGAGGNAGLLIGAAGLGGCGGGAFTAGVTTGG  660
            GGAGGSAFLIGSGGTGGVGGAATTTGGVGGAGGNAGLLIGAAGLGGCGGGAFTAGVTTGG
Sbjct  637  GGAGGSAFLIGSGGTGGVGGAATTTGGVGGAGGNAGLLIGAAGLGGCGGGAFTAGVTTGG  696

Query  661  AGGTGGAAGLFANGGAGGAGGTGSTAGGAGGAGGAGGLYAHGGTGGPGGNGGSTGAGGTG  720
            AGGTGGAAGLFANGGAGGAGGTGSTAGGAGGAGGAGGLYAHGGTGGPGGNGGSTGAGGTG
Sbjct  697  AGGTGGAAGLFANGGAGGAGGTGSTAGGAGGAGGAGGLYAHGGTGGPGGNGGSTGAGGTG  756

Query  721  GAGGPGGLYGAGGSGGAGGHGGMAGGGGGVGGNAGSLTLNASGGAGGSGGSSLSGKAGAG  780
            GAGGPGGLYGAGGSGGAGGHGGMAGGGGGVGGNAGSLTLNASGGAGGSGGSSLSGKAGAG
Sbjct  757  GAGGPGGLYGAGGSGGAGGHGGMAGGGGGVGGNAGSLTLNASGGAGGSGGSSLSGKAGAG  816

Query  781  GAGGSAGLFYGSGGAGGNGGYSLNGTGGDGGTGGAGQITGLRSGFGGAGGAGGASDTGAG  840
            GAGGSAGLFYGSGGAGGNGGYSLNGTGGDGGTGGAGQITGLRSGFGGAGGAGGASDTGAG
Sbjct  817  GAGGSAGLFYGSGGAGGNGGYSLNGTGGDGGTGGAGQITGLRSGFGGAGGAGGASDTGAG  876

Query  841  GNGGAGGKAGLYGNGGDGGAGGDGATSGKGGAGGNAVVIGNGGNGGNAGKAGGTAGAGGA  900
            GNGGAGGKAGLYGNGGDGGAGGDGATSGKGGAGGNAVVIGNGGNGGNAGKAGGTAGAGGA
Sbjct  877  GNGGAGGKAGLYGNGGDGGAGGDGATSGKGGAGGNAVVIGNGGNGGNAGKAGGTAGAGGA  936

Query  901  GGLVLGRDGQHGLT  914
            GGLVLGRDGQHGLT
Sbjct  937  GGLVLGRDGQHGLT  950


>gi|297634316|ref|ZP_06952096.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207]
Length=657

 Score =  167 bits (422),  Expect = 1e-38, Method: Compositional matrix adjust.
 Identities = 136/136 (100%), Positives = 136/136 (100%), Gaps = 0/136 (0%)

Query  1    MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR  60
            MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR
Sbjct  37   MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR  96

Query  61   AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPLLNSINAPVLAATGRPLIGNGAN  120
            AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPLLNSINAPVLAATGRPLIGNGAN
Sbjct  97   AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPLLNSINAPVLAATGRPLIGNGAN  156

Query  121  GAPGTGANGGDAGWLI  136
            GAPGTGANGGDAGWLI
Sbjct  157  GAPGTGANGGDAGWLI  172


>gi|339294426|gb|AEJ46537.1| putative PE family protein [Mycobacterium tuberculosis CCDC5079]
Length=1330

 Score =  138 bits (347),  Expect = 5e-30, Method: Compositional matrix adjust.
 Identities = 71/122 (59%), Positives = 87/122 (72%), Gaps = 7/122 (5%)

Query  1    MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR  60
            MS VI  PET+AAAA+D+A +GS+I  AN+AAA +TTS+LAAGADE+SAAIA LFG+H R
Sbjct  2    MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR  61

Query  61   AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPL-------LNSINAPVLAATGRP  113
             YQA S + AAFH RF Q L+   G+Y +AEA    PL       LN++NAP  A  GRP
Sbjct  62   EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP  121

Query  114  LI  115
            LI
Sbjct  122  LI  123


>gi|339631517|ref|YP_004723159.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
 gi|339330873|emb|CCC26544.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
Length=1389

 Score =  136 bits (343),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 71/122 (59%), Positives = 86/122 (71%), Gaps = 7/122 (5%)

Query  1    MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR  60
            MS VI  PET+AAAA D+A +GS+I  AN+AAA +TTS+LAAGADE+SAAIA LFG+H R
Sbjct  1    MSLVIVAPETVAAAALDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR  60

Query  61   AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPL-------LNSINAPVLAATGRP  113
             YQA S + AAFH RF Q L+   G+Y +AEA    PL       LN++NAP  A  GRP
Sbjct  61   EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP  120

Query  114  LI  115
            LI
Sbjct  121  LI  122


>gi|31792644|ref|NP_855137.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97]
 gi|31618234|emb|CAD96152.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
Length=1408

 Score =  136 bits (342),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 71/122 (59%), Positives = 86/122 (71%), Gaps = 7/122 (5%)

Query  1    MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR  60
            MS VI  PET+AAAA D+A +GS+I  AN+AAA +TTS+LAAGADE+SAAIA LFG+H R
Sbjct  1    MSLVIVAPETVAAAALDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR  60

Query  61   AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPL-------LNSINAPVLAATGRP  113
             YQA S + AAFH RF Q L+   G+Y +AEA    PL       LN++NAP  A  GRP
Sbjct  61   EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP  120

Query  114  LI  115
            LI
Sbjct  121  LI  122


>gi|183984370|ref|YP_001852661.1| PE-PGRS family protein [Mycobacterium marinum M]
 gi|183177696|gb|ACC42806.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=910

 Score =  135 bits (341),  Expect = 3e-29, Method: Compositional matrix adjust.
 Identities = 82/132 (63%), Positives = 103/132 (79%), Gaps = 3/132 (2%)

Query  1    MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR  60
            MS+VIAVP+ +A AA++LA +GST++ A  AAAA TT +LAA  DE+SAAIAA+F AHG+
Sbjct  1    MSYVIAVPDLVAGAASELAGVGSTLSTATTAAAAQTTGVLAAAGDEVSAAIAAVFSAHGQ  60

Query  61   AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTP---LLNSINAPVLAATGRPLIGN  117
            +YQ  SA+A  FH +FVQAL+ G  AY  AEAA+ +P   LL +INAPV + TGRPLIGN
Sbjct  61   SYQTLSAQAETFHAQFVQALSAGASAYTQAEAASASPLAGLLAAINAPVQSLTGRPLIGN  120

Query  118  GANGAPGTGANG  129
            GANG PGTGA+G
Sbjct  121  GANGTPGTGADG  132


 Score = 39.7 bits (91),  Expect = 2.4, Method: Compositional matrix adjust.
 Identities = 18/23 (79%), Positives = 20/23 (87%), Gaps = 0/23 (0%)

Query  99   LNSINAPVLAATGRPLIGNGANG  121
            LN+INAP+ AATGRPLIGNG  G
Sbjct  498  LNAINAPIQAATGRPLIGNGTPG  520


>gi|339298064|gb|AEJ50174.1| putative PE family protein [Mycobacterium tuberculosis CCDC5180]
Length=1330

 Score =  135 bits (341),  Expect = 3e-29, Method: Compositional matrix adjust.
 Identities = 70/122 (58%), Positives = 87/122 (72%), Gaps = 7/122 (5%)

Query  1    MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR  60
            MS VI  PET+AAAA+D+A +GS+I  AN+AAA +TTS+LAAGAD++SAAIA LFG+H R
Sbjct  2    MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADDVSAAIATLFGSHAR  61

Query  61   AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPL-------LNSINAPVLAATGRP  113
             YQA S + AAFH RF Q L+   G+Y +AEA    PL       LN++NAP  A  GRP
Sbjct  62   EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP  121

Query  114  LI  115
            LI
Sbjct  122  LI  123


>gi|183982116|ref|YP_001850407.1| PE-PGRS family protein [Mycobacterium marinum M]
 gi|183175442|gb|ACC40552.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=1386

 Score =  134 bits (338),  Expect = 5e-29, Method: Compositional matrix adjust.
 Identities = 72/123 (59%), Positives = 85/123 (70%), Gaps = 9/123 (7%)

Query  1    MSFV-IAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHG  59
            MSFV +A PE +A AA+DL  LGSTI+ AN AAA +TT++LAAGADE+SA IAALFG H 
Sbjct  1    MSFVGVA-PEMVAVAASDLERLGSTISAANVAAAGSTTTILAAGADEVSAVIAALFGTHA  59

Query  60   RAYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTP-------LLNSINAPVLAATGR  112
              YQA S + + FH +FVQ LT G GAY+AAE   V P       LLN +NAP  A  GR
Sbjct  60   LEYQAISTQLSVFHEQFVQTLTNGVGAYSAAELVNVLPLQNVEQDLLNLVNAPTQALFGR  119

Query  113  PLI  115
            PLI
Sbjct  120  PLI  122


 Score = 42.0 bits (97),  Expect = 0.47, Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 26/36 (73%), Gaps = 2/36 (5%)

Query  499  YNAPESTS--PWHNLQQDILSFINEPTEALTGRPLI  532
            Y+A E  +  P  N++QD+L+ +N PT+AL GRPLI
Sbjct  87   YSAAELVNVLPLQNVEQDLLNLVNAPTQALFGRPLI  122


>gi|183981229|ref|YP_001849520.1| PE-PGRS family protein [Mycobacterium marinum M]
 gi|183174555|gb|ACC39665.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=946

 Score =  130 bits (326),  Expect = 1e-27, Method: Compositional matrix adjust.
 Identities = 71/123 (58%), Positives = 86/123 (70%), Gaps = 3/123 (2%)

Query  1    MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR  60
            M+FV+  PE + AAA+DLA++GS I  AN A AA T  LLAAG DE+S AIA+LF  H  
Sbjct  1    MAFVLVAPEMVTAAASDLANIGSAINTANTAVAAPTAELLAAGTDEVSEAIASLFSGHAL  60

Query  61   AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTP---LLNSINAPVLAATGRPLIGN  117
             YQ+  A   AFH +FV ALT GGG Y++AEAAA TP   LLN +NAP  A  GRPLIG+
Sbjct  61   DYQSLGARMTAFHDQFVAALTAGGGLYSSAEAAAATPLQDLLNVVNAPTQALLGRPLIGD  120

Query  118  GAN  120
            GA+
Sbjct  121  GAD  123


 Score = 40.0 bits (92),  Expect = 1.9, Method: Compositional matrix adjust.
 Identities = 15/23 (66%), Positives = 20/23 (87%), Gaps = 0/23 (0%)

Query  513  QDILSFINEPTEALTGRPLIGNG  535
            QD+L+ +N PT+AL GRPLIG+G
Sbjct  99   QDLLNVVNAPTQALLGRPLIGDG  121


>gi|183981230|ref|YP_001849521.1| PE-PGRS family protein [Mycobacterium marinum M]
 gi|183174556|gb|ACC39666.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=963

 Score =  129 bits (325),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 71/123 (58%), Positives = 86/123 (70%), Gaps = 3/123 (2%)

Query  1    MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR  60
            M+FV+  PE + AAA+DLA++GS I  AN A AA T  LLAAG DE+S AIA+LF  H  
Sbjct  1    MAFVLVAPEMVTAAASDLANIGSAINTANTAVAAPTAELLAAGTDEVSEAIASLFSGHAL  60

Query  61   AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTP---LLNSINAPVLAATGRPLIGN  117
             YQ+  A   AFH +FV ALT GGG Y++AEAAA TP   LLN +NAP  A  GRPLIG+
Sbjct  61   DYQSLGARMTAFHDQFVAALTAGGGLYSSAEAAAATPLQDLLNVVNAPTQALLGRPLIGD  120

Query  118  GAN  120
            GA+
Sbjct  121  GAD  123


 Score = 40.0 bits (92),  Expect = 2.2, Method: Compositional matrix adjust.
 Identities = 15/23 (66%), Positives = 20/23 (87%), Gaps = 0/23 (0%)

Query  513  QDILSFINEPTEALTGRPLIGNG  535
            QD+L+ +N PT+AL GRPLIG+G
Sbjct  99   QDLLNVVNAPTQALLGRPLIGDG  121


>gi|340626466|ref|YP_004744918.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
 gi|340004656|emb|CCC43800.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=1006

 Score =  129 bits (323),  Expect = 3e-27, Method: Compositional matrix adjust.
 Identities = 69/122 (57%), Positives = 84/122 (69%), Gaps = 7/122 (5%)

Query  1    MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR  60
            MS VI  PE +AAAA+D+A +GS    AN+ AA +TTS+LAAGADE+SAAIA LFG+H R
Sbjct  1    MSLVIVTPELVAAAASDVARIGSGFGAANSTAAGSTTSVLAAGADEVSAAIATLFGSHAR  60

Query  61   AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPL-------LNSINAPVLAATGRP  113
             YQA S + AAFH RFVQ L+   G+Y +AEA    PL       LN++NAP  A  GRP
Sbjct  61   EYQAISTQVAAFHDRFVQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP  120

Query  114  LI  115
            LI
Sbjct  121  LI  122


>gi|253797511|ref|YP_003030512.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
 gi|253319014|gb|ACT23617.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
 gi|328457295|gb|AEB02718.1| hypothetical protein TBSG_00589 [Mycobacterium tuberculosis KZN 
4207]
 gi|344218399|gb|AEM99029.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2]
Length=1303

 Score =  129 bits (323),  Expect = 3e-27, Method: Compositional matrix adjust.
 Identities = 69/124 (56%), Positives = 82/124 (67%), Gaps = 2/124 (1%)

Query  1    MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR  60
            MSFVIA PE +  AATDLA +GST   A   AAA    +L A ADE+S A+AALFG H +
Sbjct  1    MSFVIATPEMLTTAATDLAKIGST-ITAANTAAAAVAKVLPASADEVSVAVAALFGTHAQ  59

Query  61   AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTP-LLNSINAPVLAATGRPLIGNGA  119
             YQ  SA+ A FH RFVQ L+    +Y AAEA  V   LL ++NAP  A  GRPLIGNGA
Sbjct  60   EYQTVSAQVATFHDRFVQTLSATASSYVAAEAVNVEQSLLAAVNAPTQALFGRPLIGNGA  119

Query  120  NGAP  123
            +G+P
Sbjct  120  DGSP  123


 Score = 39.3 bits (90),  Expect = 3.7, Method: Compositional matrix adjust.
 Identities = 21/45 (47%), Positives = 30/45 (67%), Gaps = 4/45 (8%)

Query  496  ADGYNAPESTSPWHNLQQDILSFINEPTEALTGRPLIGNGDSGTP  540
            A  Y A E+ +    ++Q +L+ +N PT+AL GRPLIGNG  G+P
Sbjct  83   ASSYVAAEAVN----VEQSLLAAVNAPTQALFGRPLIGNGADGSP  123


>gi|340628625|ref|YP_004747077.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
 gi|340006815|emb|CCC46004.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=901

 Score =  129 bits (323),  Expect = 3e-27, Method: Compositional matrix adjust.
 Identities = 103/139 (75%), Positives = 116/139 (84%), Gaps = 4/139 (2%)

Query  1    MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR  60
            MS+VIA PE + AAATDLA LGSTI  ANAAAA +TT+LLAAGADE+SAAIAALFG HG+
Sbjct  101  MSYVIAAPEALVAAATDLATLGSTIGAANAAAAGSTTALLAAGADEVSAAIAALFGMHGQ  160

Query  61   AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPL---LNSINAPVLAATGRPLIGN  117
             YQA SA AAAFH RFVQAL TGGGAYAAAEAA+ +PL   L+ +NAP  A  GRPLIGN
Sbjct  161  TYQALSARAAAFHERFVQALATGGGAYAAAEAASASPLQGALDLLNAPTQALLGRPLIGN  220

Query  118  GANGAPGTGANGGDAGWLI  136
            GANGAPG+GANGGD GW++
Sbjct  221  GANGAPGSGANGGD-GWIL  238


 Score = 42.0 bits (97),  Expect = 0.50, Method: Compositional matrix adjust.
 Identities = 23/38 (61%), Positives = 28/38 (74%), Gaps = 0/38 (0%)

Query  516  LSFINEPTEALTGRPLIGNGDSGTPGTGDDGGAGGWLF  553
            L  +N PT+AL GRPLIGNG +G PG+G +GG G  LF
Sbjct  202  LDLLNAPTQALLGRPLIGNGANGAPGSGANGGDGWILF  239


>gi|289552831|ref|ZP_06442041.1| LOW QUALITY PROTEIN: predicted protein [Mycobacterium tuberculosis 
KZN 605]
 gi|289437463|gb|EFD19956.1| LOW QUALITY PROTEIN: predicted protein [Mycobacterium tuberculosis 
KZN 605]
Length=998

 Score =  129 bits (323),  Expect = 4e-27, Method: Compositional matrix adjust.
 Identities = 69/124 (56%), Positives = 82/124 (67%), Gaps = 2/124 (1%)

Query  1    MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR  60
            MSFVIA PE +  AATDLA +GST   A   AAA    +L A ADE+S A+AALFG H +
Sbjct  1    MSFVIATPEMLTTAATDLAKIGST-ITAANTAAAAVAKVLPASADEVSVAVAALFGTHAQ  59

Query  61   AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTP-LLNSINAPVLAATGRPLIGNGA  119
             YQ  SA+ A FH RFVQ L+    +Y AAEA  V   LL ++NAP  A  GRPLIGNGA
Sbjct  60   EYQTVSAQVATFHDRFVQTLSATASSYVAAEAVNVEQSLLAAVNAPTQALFGRPLIGNGA  119

Query  120  NGAP  123
            +G+P
Sbjct  120  DGSP  123


 Score = 40.0 bits (92),  Expect = 2.2, Method: Compositional matrix adjust.
 Identities = 21/45 (47%), Positives = 30/45 (67%), Gaps = 4/45 (8%)

Query  496  ADGYNAPESTSPWHNLQQDILSFINEPTEALTGRPLIGNGDSGTP  540
            A  Y A E+ +    ++Q +L+ +N PT+AL GRPLIGNG  G+P
Sbjct  83   ASSYVAAEAVN----VEQSLLAAVNAPTQALFGRPLIGNGADGSP  123


>gi|183982114|ref|YP_001850405.1| PE-PGRS family protein [Mycobacterium marinum M]
 gi|183175440|gb|ACC40550.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=1397

 Score =  128 bits (322),  Expect = 4e-27, Method: Compositional matrix adjust.
 Identities = 74/121 (62%), Positives = 87/121 (72%), Gaps = 1/121 (0%)

Query  1    MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR  60
            MSFV   PE + AAA+DL+ + S IA AN+ AAA TT++L A ADE+SAAIAALFG H +
Sbjct  1    MSFVSVTPEMVVAAASDLSGINSAIAQANSVAAAATTTVLPAAADEVSAAIAALFGTHAQ  60

Query  61   AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTP-LLNSINAPVLAATGRPLIGNGA  119
             YQA SAE AAFH RFVQ+L TG G+Y  AEAA     LL  +NAP  A  GRPLIG+GA
Sbjct  61   QYQAISAELAAFHDRFVQSLNTGAGSYLRAEAANAEQGLLGLVNAPTQALFGRPLIGDGA  120

Query  120  N  120
            N
Sbjct  121  N  121


>gi|253799501|ref|YP_003032502.1| hypothetical protein TBMG_02531 [Mycobacterium tuberculosis KZN 
1435]
 gi|253321004|gb|ACT25607.1| predicted protein [Mycobacterium tuberculosis KZN 1435]
 gi|328459249|gb|AEB04672.1| hypothetical protein TBSG_02543 [Mycobacterium tuberculosis KZN 
4207]
Length=1408

 Score =  128 bits (321),  Expect = 6e-27, Method: Compositional matrix adjust.
 Identities = 72/122 (60%), Positives = 87/122 (72%), Gaps = 7/122 (5%)

Query  1    MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR  60
            MS VI  PET+AAAA+D+A +GS+I  ANAAAA +TTS+LAAGADE+SAAIA LFG+H R
Sbjct  2    MSLVIVTPETVAAAASDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR  61

Query  61   AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPL-------LNSINAPVLAATGRP  113
             YQA S + AAFH RF Q L+   G+Y +AEA    PL       LN++NAP  A  GRP
Sbjct  62   EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP  121

Query  114  LI  115
            LI
Sbjct  122  LI  123


>gi|183983306|ref|YP_001851597.1| PE-PGRS family protein [Mycobacterium marinum M]
 gi|183176632|gb|ACC41742.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=965

 Score =  127 bits (320),  Expect = 7e-27, Method: Compositional matrix adjust.
 Identities = 71/123 (58%), Positives = 85/123 (70%), Gaps = 3/123 (2%)

Query  1    MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR  60
            M+FV+  PE + AAA+DLA++GS I  AN A AA T  LLAAG DE+S AIA+LF  H  
Sbjct  1    MAFVLVAPEMVTAAASDLANIGSAINTANTAVAAPTAELLAAGTDEVSEAIASLFSGHAL  60

Query  61   AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTP---LLNSINAPVLAATGRPLIGN  117
             YQ   A   AFH +FV ALT GGG Y++AEAAA TP   LLN +NAP  A  GRPLIG+
Sbjct  61   DYQNLGARMTAFHDQFVAALTAGGGLYSSAEAAAATPLQDLLNVVNAPTQALLGRPLIGD  120

Query  118  GAN  120
            GA+
Sbjct  121  GAD  123


 Score = 39.7 bits (91),  Expect = 2.7, Method: Compositional matrix adjust.
 Identities = 15/23 (66%), Positives = 20/23 (87%), Gaps = 0/23 (0%)

Query  513  QDILSFINEPTEALTGRPLIGNG  535
            QD+L+ +N PT+AL GRPLIG+G
Sbjct  99   QDLLNVVNAPTQALLGRPLIGDG  121


>gi|183982951|ref|YP_001851242.1| PE-PGRS family protein [Mycobacterium marinum M]
 gi|183176277|gb|ACC41387.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=866

 Score =  127 bits (320),  Expect = 7e-27, Method: Compositional matrix adjust.
 Identities = 73/121 (61%), Positives = 91/121 (76%), Gaps = 3/121 (2%)

Query  6    AVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGRAYQAA  65
            AVPE +  AAT+L D+GS++  ANA A   TT+++AA  DE+SAAIAALF  HG+ YQ  
Sbjct  6    AVPEIVVHAATELRDIGSSVNTANAMATTQTTTIVAAAQDEVSAAIAALFSVHGQTYQQL  65

Query  66   SAEAAAFHGRFVQALTTGGGAYAAAEAA---AVTPLLNSINAPVLAATGRPLIGNGANGA  122
            SA+A  FH +FV+AL++ GGAYAAAEAA    +  LL +IN+PV A TGRPLIGNGANGA
Sbjct  66   SAQAITFHEQFVRALSSAGGAYAAAEAANTGPLQQLLEAINSPVQALTGRPLIGNGANGA  125

Query  123  P  123
            P
Sbjct  126  P  126


 Score = 39.7 bits (91),  Expect = 2.5, Method: Compositional matrix adjust.
 Identities = 20/30 (67%), Positives = 23/30 (77%), Gaps = 1/30 (3%)

Query  511  LQQDILSFINEPTEALTGRPLIGNGDSGTP  540
            LQQ +L  IN P +ALTGRPLIGNG +G P
Sbjct  98   LQQ-LLEAINSPVQALTGRPLIGNGANGAP  126


>gi|183985312|ref|YP_001853603.1| PE-PGRS family protein [Mycobacterium marinum M]
 gi|183178638|gb|ACC43748.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=846

 Score =  127 bits (320),  Expect = 8e-27, Method: Compositional matrix adjust.
 Identities = 73/130 (57%), Positives = 93/130 (72%), Gaps = 8/130 (6%)

Query  1    MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAA-GADEISAAIAALFGAHG  59
            MS+V A PE + AAA +++ +GS++  ANA+AAA TT+LL+A GADE+SAA+ A+FG H 
Sbjct  1    MSYVFASPEVLNAAAAEVSTIGSSLQTANASAAAPTTALLSALGADEVSAAVTAMFGNHA  60

Query  60   RAYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAV-----TP--LLNSINAPVLAATGR  112
            +AYQA S +AA FH RFV ALT G  AY++AEA+        P  LLN +NAP  A  GR
Sbjct  61   QAYQAVSTQAAEFHDRFVAALTAGADAYSSAEASTAATLQSLPQDLLNVVNAPTQALLGR  120

Query  113  PLIGNGANGA  122
             LIGNGANGA
Sbjct  121  ALIGNGANGA  130


 Score = 40.8 bits (94),  Expect = 1.2, Method: Compositional matrix adjust.
 Identities = 21/43 (49%), Positives = 31/43 (73%), Gaps = 2/43 (4%)

Query  495  GADGYNAPESTS--PWHNLQQDILSFINEPTEALTGRPLIGNG  535
            GAD Y++ E+++     +L QD+L+ +N PT+AL GR LIGNG
Sbjct  84   GADAYSSAEASTAATLQSLPQDLLNVVNAPTQALLGRALIGNG  126


>gi|57116865|ref|YP_177812.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv]
 gi|7441217|pir||E70917 hypothetical glycine-rich protein Rv1450c - Mycobacterium tuberculosis 
(strain H37RV)
 gi|38490271|emb|CAE55390.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv]
Length=1329

 Score =  127 bits (318),  Expect = 1e-26, Method: Compositional matrix adjust.
 Identities = 72/122 (60%), Positives = 86/122 (71%), Gaps = 7/122 (5%)

Query  1    MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR  60
            MS VI  PET+AAAA D+A +GS+I  ANAAAA +TTS+LAAGADE+SAAIA LFG+H R
Sbjct  1    MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR  60

Query  61   AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPL-------LNSINAPVLAATGRP  113
             YQA S + AAFH RF Q L+   G+Y +AEA    PL       LN++NAP  A  GRP
Sbjct  61   EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP  120

Query  114  LI  115
            LI
Sbjct  121  LI  122


>gi|15840909|ref|NP_335946.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
 gi|13881112|gb|AAK45760.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
Length=1408

 Score =  127 bits (318),  Expect = 1e-26, Method: Compositional matrix adjust.
 Identities = 72/122 (60%), Positives = 86/122 (71%), Gaps = 7/122 (5%)

Query  1    MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR  60
            MS VI  PET+AAAA D+A +GS+I  ANAAAA +TTS+LAAGADE+SAAIA LFG+H R
Sbjct  2    MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR  61

Query  61   AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPL-------LNSINAPVLAATGRP  113
             YQA S + AAFH RF Q L+   G+Y +AEA    PL       LN++NAP  A  GRP
Sbjct  62   EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP  121

Query  114  LI  115
            LI
Sbjct  122  LI  123


>gi|148661242|ref|YP_001282765.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
 gi|148505394|gb|ABQ73203.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
Length=1398

 Score =  126 bits (317),  Expect = 2e-26, Method: Compositional matrix adjust.
 Identities = 72/122 (60%), Positives = 86/122 (71%), Gaps = 7/122 (5%)

Query  1    MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR  60
            MS VI  PET+AAAA D+A +GS+I  ANAAAA +TTS+LAAGADE+SAAIA LFG+H R
Sbjct  1    MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR  60

Query  61   AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPL-------LNSINAPVLAATGRP  113
             YQA S + AAFH RF Q L+   G+Y +AEA    PL       LN++NAP  A  GRP
Sbjct  61   EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP  120

Query  114  LI  115
            LI
Sbjct  121  LI  122


>gi|148822669|ref|YP_001287423.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
 gi|148721196|gb|ABR05821.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
 gi|344219280|gb|AEM99910.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2]
Length=1407

 Score =  126 bits (317),  Expect = 2e-26, Method: Compositional matrix adjust.
 Identities = 72/122 (60%), Positives = 86/122 (71%), Gaps = 7/122 (5%)

Query  1    MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR  60
            MS VI  PET+AAAA D+A +GS+I  ANAAAA +TTS+LAAGADE+SAAIA LFG+H R
Sbjct  1    MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR  60

Query  61   AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPL-------LNSINAPVLAATGRP  113
             YQA S + AAFH RF Q L+   G+Y +AEA    PL       LN++NAP  A  GRP
Sbjct  61   EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP  120

Query  114  LI  115
            LI
Sbjct  121  LI  122


>gi|183985012|ref|YP_001853303.1| PE-PGRS family protein [Mycobacterium marinum M]
 gi|183178338|gb|ACC43448.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=1451

 Score =  125 bits (314),  Expect = 3e-26, Method: Compositional matrix adjust.
 Identities = 74/126 (59%), Positives = 92/126 (74%), Gaps = 3/126 (2%)

Query  1    MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR  60
            MS++IA PE + +AA DLA + S ++ AN +AA  TT +LAAGADE+SAAIAALFGAH +
Sbjct  1    MSYLIAAPELMQSAAADLAGIESALSAANVSAAVPTTQILAAGADEVSAAIAALFGAHAQ  60

Query  61   AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTP---LLNSINAPVLAATGRPLIGN  117
            AYQA  +   AFH  FVQAL +G  +YA AEAA++ P   L + +NAP  A  GRPLIGN
Sbjct  61   AYQALGSHVTAFHQEFVQALNSGAASYANAEAASIAPLQALYDLVNAPTQALLGRPLIGN  120

Query  118  GANGAP  123
            GANGAP
Sbjct  121  GANGAP  126


 Score = 38.5 bits (88),  Expect = 5.4, Method: Compositional matrix adjust.
 Identities = 22/31 (71%), Positives = 25/31 (81%), Gaps = 0/31 (0%)

Query  99   LNSINAPVLAATGRPLIGNGANGAPGTGANG  129
            LN+INAP  A TGRPLIGNG  GA G+GA+G
Sbjct  784  LNAINAPFDALTGRPLIGNGTPGAAGSGADG  814


>gi|253797204|ref|YP_003030205.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
 gi|253318707|gb|ACT23310.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
 gi|328456991|gb|AEB02414.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207]
Length=967

 Score =  125 bits (313),  Expect = 4e-26, Method: Compositional matrix adjust.
 Identities = 106/136 (78%), Positives = 117/136 (87%), Gaps = 0/136 (0%)

Query  1    MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR  60
            MSFVIA PE IAAAATDLA L S+IA ANAAAAANTT+LLAAGADE+S A+AALFGAHG+
Sbjct  36   MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ  95

Query  61   AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPLLNSINAPVLAATGRPLIGNGAN  120
            AYQA SA+A AFH +F QALT+GGGAYAAAEAAAV+PLL+ IN   LA TGRPLIGNG N
Sbjct  96   AYQALSAQAQAFHAQFTQALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGTN  155

Query  121  GAPGTGANGGDAGWLI  136
            GAPGTGA+G   GWLI
Sbjct  156  GAPGTGADGAPGGWLI  171


>gi|183982702|ref|YP_001850993.1| PE-PGRS family protein, PE_PGRS9_1 [Mycobacterium marinum M]
 gi|183176028|gb|ACC41138.1| PE-PGRS family protein, PE_PGRS9_1 [Mycobacterium marinum M]
Length=893

 Score =  123 bits (309),  Expect = 1e-25, Method: Compositional matrix adjust.
 Identities = 73/130 (57%), Positives = 88/130 (68%), Gaps = 7/130 (5%)

Query  1    MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR  60
            M+FV+AVP+ +A AA DLA +GS I  AN AAA +TT ++AA  DE+SAAIAALF  HG+
Sbjct  1    MAFVLAVPDMVAGAAADLAGVGSVIDAANTAAAGSTTGIVAAAEDEVSAAIAALFSGHGQ  60

Query  61   AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAA----AVTPL---LNSINAPVLAATGRP  113
            AYQ  SA  A FH +F + L  G  AY+ AEAA       PL   LN+IN PV   TGRP
Sbjct  61   AYQQISARVAEFHAQFERVLAAGAQAYSGAEAANASFLQDPLQTALNAINTPVQDLTGRP  120

Query  114  LIGNGANGAP  123
            L+GNGANG P
Sbjct  121  LVGNGANGVP  130


>gi|328456993|gb|AEB02416.1| PE family protein [Mycobacterium tuberculosis KZN 4207]
Length=779

 Score =  123 bits (309),  Expect = 1e-25, Method: Compositional matrix adjust.
 Identities = 113/138 (82%), Positives = 124/138 (90%), Gaps = 0/138 (0%)

Query  1    MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR  60
            MSFVIA PE IAAAATDLA LGS+I+ ANAAAAANTT+L+AAGADE+S AIAALFGAHG+
Sbjct  8    MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ  67

Query  61   AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPLLNSINAPVLAATGRPLIGNGAN  120
            AYQA SA+A AFH +FVQALT+GGGAYAAAEAAAV+PLL+ IN   LA TGRPLIGNGAN
Sbjct  68   AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGAN  127

Query  121  GAPGTGANGGDAGWLIGN  138
            GAPGTGANGGD GWLIGN
Sbjct  128  GAPGTGANGGDGGWLIGN  145


>gi|31791457|ref|NP_853950.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97]
 gi|31617042|emb|CAD93150.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
Length=877

 Score =  122 bits (307),  Expect = 2e-25, Method: Compositional matrix adjust.
 Identities = 111/136 (82%), Positives = 122/136 (90%), Gaps = 0/136 (0%)

Query  1    MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR  60
            MSFVIA PE IAAAATDLA LGS+I+ ANAAAAANTT+L+AAGADE+S AIAALFGAHG+
Sbjct  1    MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ  60

Query  61   AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPLLNSINAPVLAATGRPLIGNGAN  120
            AYQA SA+A AFH +FVQALT+GGGAYAAAEAAAV+PLL+ IN   LA TGRPLIGNGAN
Sbjct  61   AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGAN  120

Query  121  GAPGTGANGGDAGWLI  136
            GAPGTGANGGD GWLI
Sbjct  121  GAPGTGANGGDGGWLI  136


 Score = 39.7 bits (91),  Expect = 2.8, Method: Compositional matrix adjust.
 Identities = 17/25 (68%), Positives = 18/25 (72%), Gaps = 0/25 (0%)

Query  99   LNSINAPVLAATGRPLIGNGANGAP  123
            LN +N P    TGRPLIGNGANG P
Sbjct  488  LNVVNEPFQTLTGRPLIGNGANGTP  512


>gi|148660044|ref|YP_001281567.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
 gi|148504196|gb|ABQ72005.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
Length=957

 Score =  122 bits (307),  Expect = 2e-25, Method: Compositional matrix adjust.
 Identities = 111/136 (82%), Positives = 122/136 (90%), Gaps = 0/136 (0%)

Query  1    MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR  60
            MSFVIA PE IAAAATDLA LGS+I+ ANAAAAANTT+L+AAGADE+S AIAALFGAHG+
Sbjct  1    MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ  60

Query  61   AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPLLNSINAPVLAATGRPLIGNGAN  120
            AYQA SA+A AFH +FVQALT+GGGAYAAAEAAAV+PLL+ IN   LA TGRPLIGNGAN
Sbjct  61   AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGAN  120

Query  121  GAPGTGANGGDAGWLI  136
            GAPGTGANGGD GWLI
Sbjct  121  GAPGTGANGGDGGWLI  136


>gi|57116712|ref|YP_177707.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv]
 gi|7388393|sp|P56877.1|PG03_MYCTU RecName: Full=Uncharacterized PE-PGRS family protein PE_PGRS3; 
Flags: Precursor
 gi|41352752|emb|CAE55262.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv]
Length=957

 Score =  122 bits (307),  Expect = 3e-25, Method: Compositional matrix adjust.
 Identities = 111/136 (82%), Positives = 122/136 (90%), Gaps = 0/136 (0%)

Query  1    MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR  60
            MSFVIA PE IAAAATDLA LGS+I+ ANAAAAANTT+L+AAGADE+S AIAALFGAHG+
Sbjct  1    MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ  60

Query  61   AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPLLNSINAPVLAATGRPLIGNGAN  120
            AYQA SA+A AFH +FVQALT+GGGAYAAAEAAAV+PLL+ IN   LA TGRPLIGNGAN
Sbjct  61   AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGAN  120

Query  121  GAPGTGANGGDAGWLI  136
            GAPGTGANGGD GWLI
Sbjct  121  GAPGTGANGGDGGWLI  136


>gi|253797205|ref|YP_003030206.1| hypothetical protein TBMG_00283 [Mycobacterium tuberculosis KZN 
1435]
 gi|253318708|gb|ACT23311.1| predicted protein [Mycobacterium tuberculosis KZN 1435]
Length=919

 Score =  122 bits (306),  Expect = 3e-25, Method: Compositional matrix adjust.
 Identities = 111/136 (82%), Positives = 122/136 (90%), Gaps = 0/136 (0%)

Query  1    MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR  60
            MSFVIA PE IAAAATDLA LGS+I+ ANAAAAANTT+L+AAGADE+S AIAALFGAHG+
Sbjct  8    MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ  67

Query  61   AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPLLNSINAPVLAATGRPLIGNGAN  120
            AYQA SA+A AFH +FVQALT+GGGAYAAAEAAAV+PLL+ IN   LA TGRPLIGNGAN
Sbjct  68   AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGAN  127

Query  121  GAPGTGANGGDAGWLI  136
            GAPGTGANGGD GWLI
Sbjct  128  GAPGTGANGGDGGWLI  143


 Score = 39.7 bits (91),  Expect = 2.9, Method: Compositional matrix adjust.
 Identities = 17/25 (68%), Positives = 18/25 (72%), Gaps = 0/25 (0%)

Query  99   LNSINAPVLAATGRPLIGNGANGAP  123
            LN +N P    TGRPLIGNGANG P
Sbjct  517  LNVVNEPFQTLTGRPLIGNGANGTP  541


>gi|121636193|ref|YP_976416.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|224988666|ref|YP_002643353.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
 gi|121491840|emb|CAL70303.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|224771779|dbj|BAH24585.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
 gi|341600209|emb|CCC62879.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length=899

 Score =  122 bits (306),  Expect = 3e-25, Method: Compositional matrix adjust.
 Identities = 111/136 (82%), Positives = 122/136 (90%), Gaps = 0/136 (0%)

Query  1    MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR  60
            MSFVIA PE IAAAATDLA LGS+I+ ANAAAAANTT+L+AAGADE+S AIAALFGAHG+
Sbjct  1    MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ  60

Query  61   AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPLLNSINAPVLAATGRPLIGNGAN  120
            AYQA SA+A AFH +FVQALT+GGGAYAAAEAAAV+PLL+ IN   LA TGRPLIGNGAN
Sbjct  61   AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGAN  120

Query  121  GAPGTGANGGDAGWLI  136
            GAPGTGANGGD GWLI
Sbjct  121  GAPGTGANGGDGGWLI  136


 Score = 39.3 bits (90),  Expect = 3.3, Method: Compositional matrix adjust.
 Identities = 17/25 (68%), Positives = 18/25 (72%), Gaps = 0/25 (0%)

Query  99   LNSINAPVLAATGRPLIGNGANGAP  123
            LN +N P    TGRPLIGNGANG P
Sbjct  510  LNVVNEPFQTLTGRPLIGNGANGTP  534


>gi|148821476|ref|YP_001286230.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
 gi|148720003|gb|ABR04628.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
 gi|344218099|gb|AEM98729.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2]
Length=906

 Score =  122 bits (305),  Expect = 4e-25, Method: Compositional matrix adjust.
 Identities = 111/136 (82%), Positives = 122/136 (90%), Gaps = 0/136 (0%)

Query  1    MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR  60
            MSFVIA PE IAAAATDLA LGS+I+ ANAAAAANTT+L+AAGADE+S AIAALFGAHG+
Sbjct  8    MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ  67

Query  61   AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPLLNSINAPVLAATGRPLIGNGAN  120
            AYQA SA+A AFH +FVQALT+GGGAYAAAEAAAV+PLL+ IN   LA TGRPLIGNGAN
Sbjct  68   AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGAN  127

Query  121  GAPGTGANGGDAGWLI  136
            GAPGTGANGGD GWLI
Sbjct  128  GAPGTGANGGDGGWLI  143


 Score = 39.3 bits (90),  Expect = 3.2, Method: Compositional matrix adjust.
 Identities = 17/25 (68%), Positives = 18/25 (72%), Gaps = 0/25 (0%)

Query  99   LNSINAPVLAATGRPLIGNGANGAP  123
            LN +N P    TGRPLIGNGANG P
Sbjct  517  LNVVNEPFQTLTGRPLIGNGANGTP  541


>gi|224988667|ref|YP_002643354.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
 gi|224771780|dbj|BAH24586.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
Length=834

 Score =  120 bits (302),  Expect = 8e-25, Method: Compositional matrix adjust.
 Identities = 109/138 (79%), Positives = 119/138 (87%), Gaps = 0/138 (0%)

Query  1    MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR  60
            MSFVIA PE IAAAATDLA L S+IA ANAAAAANTT+LLAAGADE+S A+AALFGAHG+
Sbjct  1    MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ  60

Query  61   AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPLLNSINAPVLAATGRPLIGNGAN  120
            AYQA SA+A AFH +FVQALT+GGGAYAAAEAAA +PLL  IN   LA TGRPLIGNGAN
Sbjct  61   AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGAN  120

Query  121  GAPGTGANGGDAGWLIGN  138
            GAPGTGA+G   GWLIGN
Sbjct  121  GAPGTGADGAPGGWLIGN  138


 Score = 42.0 bits (97),  Expect = 0.53, Method: Compositional matrix adjust.
 Identities = 24/39 (62%), Positives = 25/39 (65%), Gaps = 7/39 (17%)

Query  92   AAAVTPL-------LNSINAPVLAATGRPLIGNGANGAP  123
            A A TPL       LN+IN P  A TGRPLIGNGANG P
Sbjct  462  APASTPLHTLQQQILNAINEPTQALTGRPLIGNGANGTP  500


 Score = 40.8 bits (94),  Expect = 1.3, Method: Compositional matrix adjust.
 Identities = 38/107 (36%), Positives = 41/107 (39%), Gaps = 56/107 (52%)

Query  497  DGYNAPESTSPWHNLQQDILSFINEPTEALTGRPLIGNGDSGTPGTGDDGGAGGWLFGNG  556
            DG+NAP ST P H LQQ IL+ INEPT+ALTGRPLIG                     NG
Sbjct  458  DGFNAPAST-PLHTLQQQILNAINEPTQALTGRPLIG---------------------NG  495

Query  557  GNGGAGAAGTNGSAGGAGGAGGILFGTGGAGGAGGVGTAGAGGAGGA  603
             NG                                  T G G  GGA
Sbjct  496  ANG----------------------------------TPGTGADGGA  508


>gi|121636194|ref|YP_976417.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|121491841|emb|CAL70304.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|341600210|emb|CCC62880.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length=834

 Score =  120 bits (301),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 109/138 (79%), Positives = 119/138 (87%), Gaps = 0/138 (0%)

Query  1    MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR  60
            MSFVIA PE IAAAATDLA L S+IA ANAAAAANTT+LLAAGADE+S A+AALFGAHG+
Sbjct  1    MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ  60

Query  61   AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPLLNSINAPVLAATGRPLIGNGAN  120
            AYQA SA+A AFH +FVQALT+GGGAYAAAEAAA +PLL  IN   LA TGRPLIGNGAN
Sbjct  61   AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGAN  120

Query  121  GAPGTGANGGDAGWLIGN  138
            GAPGTGA+G   GWLIGN
Sbjct  121  GAPGTGADGAPGGWLIGN  138


 Score = 42.0 bits (97),  Expect = 0.56, Method: Compositional matrix adjust.
 Identities = 19/26 (74%), Positives = 21/26 (81%), Gaps = 0/26 (0%)

Query  98   LLNSINAPVLAATGRPLIGNGANGAP  123
            +LN+IN P  A TGRPLIGNGANG P
Sbjct  475  ILNAINEPTQALTGRPLIGNGANGTP  500


 Score = 40.8 bits (94),  Expect = 1.3, Method: Compositional matrix adjust.
 Identities = 38/107 (36%), Positives = 41/107 (39%), Gaps = 56/107 (52%)

Query  497  DGYNAPESTSPWHNLQQDILSFINEPTEALTGRPLIGNGDSGTPGTGDDGGAGGWLFGNG  556
            DG+NAP ST P H LQQ IL+ INEPT+ALTGRPLIG                     NG
Sbjct  458  DGFNAPAST-PLHTLQQQILNAINEPTQALTGRPLIG---------------------NG  495

Query  557  GNGGAGAAGTNGSAGGAGGAGGILFGTGGAGGAGGVGTAGAGGAGGA  603
             NG                                  T G G  GGA
Sbjct  496  ANG----------------------------------TPGTGADGGA  508


>gi|121636192|ref|YP_976415.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|224988665|ref|YP_002643352.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
 gi|121491839|emb|CAL70302.1| PE-PGRS family protein [first part] [Mycobacterium bovis BCG 
str. Pasteur 1173P2]
 gi|224771778|dbj|BAH24584.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
 gi|341600208|emb|CCC62878.1| PE-PGRS family protein [first part] [Mycobacterium bovis BCG 
str. Moreau RDJ]
Length=916

 Score =  120 bits (301),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 106/136 (78%), Positives = 116/136 (86%), Gaps = 0/136 (0%)

Query  1    MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR  60
            MSFVIA PE IAAAATDLA L S+IA ANAAAAANTT+LLAAGADE+S A+AALFGAHG+
Sbjct  1    MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ  60

Query  61   AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPLLNSINAPVLAATGRPLIGNGAN  120
            AYQA SA+A AFH +F QALT+GGGAYAAAEAAA +PLL  IN   LA TGRPLIGNGAN
Sbjct  61   AYQALSAQAQAFHAQFTQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGAN  120

Query  121  GAPGTGANGGDAGWLI  136
            GAPGTGA+G   GWLI
Sbjct  121  GAPGTGADGAPGGWLI  136


>gi|31791458|ref|NP_853951.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97]
 gi|31617043|emb|CAD93151.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
Length=831

 Score =  120 bits (300),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 109/138 (79%), Positives = 119/138 (87%), Gaps = 0/138 (0%)

Query  1    MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR  60
            MSFVIA PE IAAAATDLA L S+IA ANAAAAANTT+LLAAGADE+S A+AALFGAHG+
Sbjct  1    MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ  60

Query  61   AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPLLNSINAPVLAATGRPLIGNGAN  120
            AYQA SA+A AFH +FVQALT+GGGAYAAAEAAA +PLL  IN   LA TGRPLIGNGAN
Sbjct  61   AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGAN  120

Query  121  GAPGTGANGGDAGWLIGN  138
            GAPGTGA+G   GWLIGN
Sbjct  121  GAPGTGADGAPGGWLIGN  138


 Score = 41.6 bits (96),  Expect = 0.63, Method: Compositional matrix adjust.
 Identities = 24/39 (62%), Positives = 25/39 (65%), Gaps = 7/39 (17%)

Query  92   AAAVTPL-------LNSINAPVLAATGRPLIGNGANGAP  123
            A A TPL       LN+IN P  A TGRPLIGNGANG P
Sbjct  462  APASTPLHTLQQQILNAINEPTQALTGRPLIGNGANGTP  500


 Score = 40.4 bits (93),  Expect = 1.5, Method: Compositional matrix adjust.
 Identities = 38/107 (36%), Positives = 41/107 (39%), Gaps = 56/107 (52%)

Query  497  DGYNAPESTSPWHNLQQDILSFINEPTEALTGRPLIGNGDSGTPGTGDDGGAGGWLFGNG  556
            DG+NAP ST P H LQQ IL+ INEPT+ALTGRPLIG                     NG
Sbjct  458  DGFNAPAST-PLHTLQQQILNAINEPTQALTGRPLIG---------------------NG  495

Query  557  GNGGAGAAGTNGSAGGAGGAGGILFGTGGAGGAGGVGTAGAGGAGGA  603
             NG                                  T G G  GGA
Sbjct  496  ANG----------------------------------TPGTGADGGA  508


>gi|31791456|ref|NP_853949.1| hypothetical protein Mb0285c [Mycobacterium bovis AF2122/97]
 gi|31617041|emb|CAD93149.1| PE-PGRS FAMILY PROTEIN [FIRST PART] [Mycobacterium bovis AF2122/97]
Length=868

 Score =  119 bits (298),  Expect = 3e-24, Method: Compositional matrix adjust.
 Identities = 108/138 (79%), Positives = 118/138 (86%), Gaps = 0/138 (0%)

Query  1    MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR  60
            MSFVIA PE IAAAATDLA L S+IA ANAAAAANTT+LLAAGADE+S A+AALFGAHG+
Sbjct  1    MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ  60

Query  61   AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPLLNSINAPVLAATGRPLIGNGAN  120
            AYQA SA+A AFH +F QALT+GGGAYAAAEAAA +PLL  IN   LA TGRPLIGNGAN
Sbjct  61   AYQALSAQAQAFHAQFTQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGAN  120

Query  121  GAPGTGANGGDAGWLIGN  138
            GAPGTGA+G   GWLIGN
Sbjct  121  GAPGTGADGAPGGWLIGN  138


>gi|183981609|ref|YP_001849900.1| PE-PGRS family protein [Mycobacterium marinum M]
 gi|183174935|gb|ACC40045.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=3634

 Score =  117 bits (294),  Expect = 8e-24, Method: Compositional matrix adjust.
 Identities = 72/121 (60%), Positives = 90/121 (75%), Gaps = 1/121 (0%)

Query  1    MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR  60
            MS++   PE +++AA +LA++GST++ ANAAAA  TT LLAAG+DE+S  IAALFGA+G 
Sbjct  1    MSYMSISPEIVSSAAGELANIGSTVSAANAAAAVATTELLAAGSDEVSTRIAALFGANGV  60

Query  61   AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTP-LLNSINAPVLAATGRPLIGNGA  119
             YQA SA+ A+FH RFV AL TG  +Y  AEA  V   LLN++NAPV    GRPLIGNGA
Sbjct  61   EYQAISAQIASFHDRFVAALNTGTSSYVWAEATNVEQNLLNAVNAPVQTLLGRPLIGNGA  120

Query  120  N  120
            N
Sbjct  121  N  121


>gi|118618448|ref|YP_906780.1| PE-PGRS family protein [Mycobacterium ulcerans Agy99]
 gi|118570558|gb|ABL05309.1| PE-PGRS family protein [Mycobacterium ulcerans Agy99]
Length=870

 Score =  117 bits (293),  Expect = 1e-23, Method: Compositional matrix adjust.
 Identities = 70/130 (54%), Positives = 85/130 (66%), Gaps = 7/130 (5%)

Query  1    MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR  60
            M+FV+AVP+ +A AA DLA +GS I  AN AAA +TT ++AA  DE+SAAIAALF  HG+
Sbjct  1    MAFVLAVPDMVAEAAADLAGVGSVIDAANTAAAGSTTGIVAAAEDEVSAAIAALFSGHGQ  60

Query  61   AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAA----AVTPL---LNSINAPVLAATGRP  113
            AYQ  S   A FH +F +    G  AY+ AEAA       PL   LN+ N PV   TGRP
Sbjct  61   AYQQISTRVAEFHAQFERVFAAGVQAYSGAEAANASFLQDPLQTALNATNKPVQDLTGRP  120

Query  114  LIGNGANGAP  123
            L+GNGANG P
Sbjct  121  LVGNGANGVP  130


>gi|339293336|gb|AEJ45447.1| PE-PGRS family protein [Mycobacterium tuberculosis CCDC5079]
Length=957

 Score =  117 bits (292),  Expect = 1e-23, Method: Compositional matrix adjust.
 Identities = 110/136 (81%), Positives = 120/136 (89%), Gaps = 0/136 (0%)

Query  1    MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR  60
            MSFVIA PE IAAAATDLA L S+IA ANAAAAANTT+LLAAGADE+S A+AALFGAHG+
Sbjct  1    MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ  60

Query  61   AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPLLNSINAPVLAATGRPLIGNGAN  120
            AYQA SA+A AFH +F QALT+GGGAYAAAEAAAV+PLL+ IN   LA TGRPLIGNGAN
Sbjct  61   AYQALSAQAQAFHAQFTQALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGAN  120

Query  121  GAPGTGANGGDAGWLI  136
            GAPGTGANGGD GWLI
Sbjct  121  GAPGTGANGGDGGWLI  136


>gi|340625315|ref|YP_004743767.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
 gi|340003505|emb|CCC42626.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=899

 Score =  117 bits (292),  Expect = 1e-23, Method: Compositional matrix adjust.
 Identities = 111/136 (82%), Positives = 120/136 (89%), Gaps = 0/136 (0%)

Query  1    MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR  60
            MSFVIA PE IAAAATDLA LGS+I+ ANAAAAANTT+LLAAGADE+S AIAALFGAHG+
Sbjct  1    MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALLAAGADEVSTAIAALFGAHGQ  60

Query  61   AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPLLNSINAPVLAATGRPLIGNGAN  120
            AYQA SA+A AFH +FVQALT+GGGAYAAAEAAA +PLL  IN   LA TGRPLIGNGAN
Sbjct  61   AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGAN  120

Query  121  GAPGTGANGGDAGWLI  136
            GAPGTGANGGD GWLI
Sbjct  121  GAPGTGANGGDGGWLI  136


 Score = 39.3 bits (90),  Expect = 3.2, Method: Compositional matrix adjust.
 Identities = 17/25 (68%), Positives = 18/25 (72%), Gaps = 0/25 (0%)

Query  99   LNSINAPVLAATGRPLIGNGANGAP  123
            LN +N P    TGRPLIGNGANG P
Sbjct  510  LNVVNEPFQTLTGRPLIGNGANGTP  534


>gi|341603451|emb|CCC66132.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length=1695

 Score =  117 bits (292),  Expect = 1e-23, Method: Compositional matrix adjust.
 Identities = 75/121 (62%), Positives = 89/121 (74%), Gaps = 1/121 (0%)

Query  1    MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR  60
            MSFV+  PE ++AAA DLA++GSTI+ AN AAAA TT +LAAGADE+SA IAALFG +G 
Sbjct  1    MSFVLISPEVVSAAAGDLANVGSTISAANKAAAAATTQVLAAGADEVSARIAALFGMYGL  60

Query  61   AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTP-LLNSINAPVLAATGRPLIGNGA  119
             YQA SA+ AA+H +FVQ L TG  +Y  AEA  V   LLN INAP     GRPLIG+GA
Sbjct  61   EYQAISAQVAAYHQQFVQTLRTGAASYMLAEATNVEQNLLNLINAPTQTLLGRPLIGDGA  120

Query  120  N  120
            N
Sbjct  121  N  121


 Score = 40.0 bits (92),  Expect = 1.8, Method: Compositional matrix adjust.
 Identities = 22/47 (47%), Positives = 32/47 (69%), Gaps = 5/47 (10%)

Query  495  GADGYNAPESTSPWHNLQQDILSFINEPTEALTGRPLIGNG-DSGTP  540
            GA  Y   E+T    N++Q++L+ IN PT+ L GRPLIG+G ++ TP
Sbjct  83   GAASYMLAEAT----NVEQNLLNLINAPTQTLLGRPLIGDGANATTP  125


>gi|224991926|ref|YP_002646615.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
 gi|224775041|dbj|BAH27847.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
Length=1695

 Score =  117 bits (292),  Expect = 1e-23, Method: Compositional matrix adjust.
 Identities = 75/121 (62%), Positives = 89/121 (74%), Gaps = 1/121 (0%)

Query  1    MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR  60
            MSFV+  PE ++AAA DLA++GSTI+ AN AAAA TT +LAAGADE+SA IAALFG +G 
Sbjct  1    MSFVLISPEVVSAAAGDLANVGSTISAANKAAAAATTQVLAAGADEVSARIAALFGMYGL  60

Query  61   AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTP-LLNSINAPVLAATGRPLIGNGA  119
             YQA SA+ AA+H +FVQ L TG  +Y  AEA  V   LLN INAP     GRPLIG+GA
Sbjct  61   EYQAISAQVAAYHQQFVQTLRTGAASYMLAEATNVEQNLLNLINAPTQTLLGRPLIGDGA  120

Query  120  N  120
            N
Sbjct  121  N  121


 Score = 40.0 bits (92),  Expect = 1.8, Method: Compositional matrix adjust.
 Identities = 22/47 (47%), Positives = 32/47 (69%), Gaps = 5/47 (10%)

Query  495  GADGYNAPESTSPWHNLQQDILSFINEPTEALTGRPLIGNG-DSGTP  540
            GA  Y   E+T    N++Q++L+ IN PT+ L GRPLIG+G ++ TP
Sbjct  83   GAASYMLAEAT----NVEQNLLNLINAPTQTLLGRPLIGDGANATTP  125


>gi|121639430|ref|YP_979654.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|121495078|emb|CAL73564.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 
1173P2]
Length=1810

 Score =  116 bits (291),  Expect = 2e-23, Method: Compositional matrix adjust.
 Identities = 75/121 (62%), Positives = 89/121 (74%), Gaps = 1/121 (0%)

Query  1    MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR  60
            MSFV+  PE ++AAA DLA++GSTI+ AN AAAA TT +LAAGADE+SA IAALFG +G 
Sbjct  1    MSFVLISPEVVSAAAGDLANVGSTISAANKAAAAATTQVLAAGADEVSARIAALFGMYGL  60

Query  61   AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTP-LLNSINAPVLAATGRPLIGNGA  119
             YQA SA+ AA+H +FVQ L TG  +Y  AEA  V   LLN INAP     GRPLIG+GA
Sbjct  61   EYQAISAQVAAYHQQFVQTLRTGAASYMLAEATNVEQNLLNLINAPTQTLLGRPLIGDGA  120

Query  120  N  120
            N
Sbjct  121  N  121


>gi|31794687|ref|NP_857180.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97]
 gi|31620284|emb|CAD95727.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
Length=1938

 Score =  116 bits (290),  Expect = 2e-23, Method: Compositional matrix adjust.
 Identities = 75/121 (62%), Positives = 89/121 (74%), Gaps = 1/121 (0%)

Query  1    MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR  60
            MSFV+  PE ++AAA DLA++GSTI+ AN AAAA TT +LAAGADE+SA IAALFG +G 
Sbjct  1    MSFVLISPEVVSAAAGDLANVGSTISAANKAAAAATTQVLAAGADEVSARIAALFGMYGL  60

Query  61   AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTP-LLNSINAPVLAATGRPLIGNGA  119
             YQA SA+ AA+H +FVQ L TG  +Y  AEA  V   LLN INAP     GRPLIG+GA
Sbjct  61   EYQAISAQVAAYHQQFVQTLRTGAASYMLAEATNVEQNLLNLINAPTQTLLGRPLIGDGA  120

Query  120  N  120
            N
Sbjct  121  N  121


 Score = 38.9 bits (89),  Expect = 4.6, Method: Compositional matrix adjust.
 Identities = 17/33 (52%), Positives = 25/33 (76%), Gaps = 4/33 (12%)

Query  503  ESTSPWHNLQQDILSFINEPTEALTGRPLIGNG  535
            E+T    N++Q++L+ IN PT+ L GRPLIG+G
Sbjct  91   EAT----NVEQNLLNLINAPTQTLLGRPLIGDG  119


>gi|339633513|ref|YP_004725155.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
 gi|339332869|emb|CCC28593.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
Length=1817

 Score =  116 bits (290),  Expect = 2e-23, Method: Compositional matrix adjust.
 Identities = 75/121 (62%), Positives = 89/121 (74%), Gaps = 1/121 (0%)

Query  1    MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR  60
            MSFV+  PE ++AAA DLA++GSTI+ AN AAAA TT +LAAGADE+SA IAALFG +G 
Sbjct  1    MSFVLISPEVVSAAAGDLANVGSTISAANKAAAAATTQVLAAGADEVSARIAALFGMYGL  60

Query  61   AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTP-LLNSINAPVLAATGRPLIGNGA  119
             YQA SA+ AA+H +FVQ L TG  +Y  AEA  V   LLN INAP     GRPLIG+GA
Sbjct  61   EYQAISAQVAAYHQQFVQTLRTGAASYMLAEATNVEQNLLNLINAPTQTLLGRPLIGDGA  120

Query  120  N  120
            N
Sbjct  121  N  121



Lambda     K      H
   0.308    0.140    0.427 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 2257255669590


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40