BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1759c Length=914 Score E Sequences producing significant alignments: (Bits) Value gi|57116905|ref|YP_177831.1| PE-PGRS family protein [Mycobacteri... 1458 0.0 gi|344219580|gb|AEN00211.1| PE-PGRS family protein [Mycobacteriu... 1456 0.0 gi|289554468|ref|ZP_06443678.1| predicted protein [Mycobacterium... 1451 0.0 gi|253799200|ref|YP_003032201.1| PE-PGRS family protein [Mycobac... 1447 0.0 gi|297634316|ref|ZP_06952096.1| PE-PGRS family protein [Mycobact... 167 1e-38 gi|339294426|gb|AEJ46537.1| putative PE family protein [Mycobact... 138 5e-30 gi|339631517|ref|YP_004723159.1| PE-PGRS family protein [Mycobac... 136 2e-29 gi|31792644|ref|NP_855137.1| PE-PGRS family protein [Mycobacteri... 136 2e-29 gi|183984370|ref|YP_001852661.1| PE-PGRS family protein [Mycobac... 135 3e-29 gi|339298064|gb|AEJ50174.1| putative PE family protein [Mycobact... 135 3e-29 gi|183982116|ref|YP_001850407.1| PE-PGRS family protein [Mycobac... 134 5e-29 gi|183981229|ref|YP_001849520.1| PE-PGRS family protein [Mycobac... 130 1e-27 gi|183981230|ref|YP_001849521.1| PE-PGRS family protein [Mycobac... 129 2e-27 gi|340626466|ref|YP_004744918.1| PE-PGRS family protein [Mycobac... 129 3e-27 gi|253797511|ref|YP_003030512.1| PE-PGRS family protein [Mycobac... 129 3e-27 gi|340628625|ref|YP_004747077.1| PE-PGRS family protein [Mycobac... 129 3e-27 gi|289552831|ref|ZP_06442041.1| LOW QUALITY PROTEIN: predicted p... 129 4e-27 gi|183982114|ref|YP_001850405.1| PE-PGRS family protein [Mycobac... 128 4e-27 gi|253799501|ref|YP_003032502.1| hypothetical protein TBMG_02531... 128 6e-27 gi|183983306|ref|YP_001851597.1| PE-PGRS family protein [Mycobac... 127 7e-27 gi|183982951|ref|YP_001851242.1| PE-PGRS family protein [Mycobac... 127 7e-27 gi|183985312|ref|YP_001853603.1| PE-PGRS family protein [Mycobac... 127 8e-27 gi|57116865|ref|YP_177812.1| PE-PGRS family protein [Mycobacteri... 127 1e-26 gi|15840909|ref|NP_335946.1| PE_PGRS family protein [Mycobacteri... 127 1e-26 gi|148661242|ref|YP_001282765.1| PE-PGRS family protein [Mycobac... 126 2e-26 gi|148822669|ref|YP_001287423.1| PE-PGRS family protein [Mycobac... 126 2e-26 gi|183985012|ref|YP_001853303.1| PE-PGRS family protein [Mycobac... 125 3e-26 gi|253797204|ref|YP_003030205.1| PE-PGRS family protein [Mycobac... 125 4e-26 gi|183982702|ref|YP_001850993.1| PE-PGRS family protein, PE_PGRS... 123 1e-25 gi|328456993|gb|AEB02416.1| PE family protein [Mycobacterium tub... 123 1e-25 gi|31791457|ref|NP_853950.1| PE-PGRS family protein [Mycobacteri... 122 2e-25 gi|148660044|ref|YP_001281567.1| PE-PGRS family protein [Mycobac... 122 2e-25 gi|57116712|ref|YP_177707.1| PE-PGRS family protein [Mycobacteri... 122 3e-25 gi|253797205|ref|YP_003030206.1| hypothetical protein TBMG_00283... 122 3e-25 gi|121636193|ref|YP_976416.1| PE-PGRS family protein [Mycobacter... 122 3e-25 gi|148821476|ref|YP_001286230.1| PE-PGRS family protein [Mycobac... 122 4e-25 gi|224988667|ref|YP_002643354.1| PE-PGRS family protein [Mycobac... 120 8e-25 gi|121636194|ref|YP_976417.1| PE-PGRS family protein [Mycobacter... 120 1e-24 gi|121636192|ref|YP_976415.1| PE-PGRS family protein [Mycobacter... 120 1e-24 gi|31791458|ref|NP_853951.1| PE-PGRS family protein [Mycobacteri... 120 2e-24 gi|31791456|ref|NP_853949.1| hypothetical protein Mb0285c [Mycob... 119 3e-24 gi|183981609|ref|YP_001849900.1| PE-PGRS family protein [Mycobac... 117 8e-24 gi|118618448|ref|YP_906780.1| PE-PGRS family protein [Mycobacter... 117 1e-23 gi|339293336|gb|AEJ45447.1| PE-PGRS family protein [Mycobacteriu... 117 1e-23 gi|340625315|ref|YP_004743767.1| PE-PGRS family protein [Mycobac... 117 1e-23 gi|341603451|emb|CCC66132.1| PE-PGRS family protein [Mycobacteri... 117 1e-23 gi|224991926|ref|YP_002646615.1| PE-PGRS family protein [Mycobac... 117 1e-23 gi|121639430|ref|YP_979654.1| PE-PGRS family protein [Mycobacter... 116 2e-23 gi|31794687|ref|NP_857180.1| PE-PGRS family protein [Mycobacteri... 116 2e-23 gi|339633513|ref|YP_004725155.1| PE-PGRS family protein [Mycobac... 116 2e-23 >gi|57116905|ref|YP_177831.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv] gi|61249984|sp|P0A686.1|WA22_MYCTU RecName: Full=WAG22 antigen; Flags: Precursor gi|61249985|sp|P0A687.1|WA22_MYCBO RecName: Full=WAG22 antigen; Flags: Precursor gi|38684054|emb|CAE55417.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv] Length=914 Score = 1458 bits (3775), Expect = 0.0, Method: Compositional matrix adjust. Identities = 914/914 (100%), Positives = 914/914 (100%), Gaps = 0/914 (0%) Query 1 MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR 60 MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR Sbjct 1 MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR 60 Query 61 AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPLLNSINAPVLAATGRPLIGNGAN 120 AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPLLNSINAPVLAATGRPLIGNGAN Sbjct 61 AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPLLNSINAPVLAATGRPLIGNGAN 120 Query 121 GAPGTGANGGDAGWLIGNGGAGGSGAKGANGGAGGPGGAAGLFGNGGAGGAGGTATANNG 180 GAPGTGANGGDAGWLIGNGGAGGSGAKGANGGAGGPGGAAGLFGNGGAGGAGGTATANNG Sbjct 121 GAPGTGANGGDAGWLIGNGGAGGSGAKGANGGAGGPGGAAGLFGNGGAGGAGGTATANNG 180 Query 181 IGGAGGAGGSAMLFGAGGAGGAGGAATSLVGGIGGTGGTGGNAGMLAGAAGAGGAGGFSF 240 IGGAGGAGGSAMLFGAGGAGGAGGAATSLVGGIGGTGGTGGNAGMLAGAAGAGGAGGFSF Sbjct 181 IGGAGGAGGSAMLFGAGGAGGAGGAATSLVGGIGGTGGTGGNAGMLAGAAGAGGAGGFSF 240 Query 241 STAGGAGGAGGAGGLFTTGGVGGAGGQGHTGGAGGAGGAGGLFGAGGMGGAGGFGDHGTL 300 STAGGAGGAGGAGGLFTTGGVGGAGGQGHTGGAGGAGGAGGLFGAGGMGGAGGFGDHGTL Sbjct 241 STAGGAGGAGGAGGLFTTGGVGGAGGQGHTGGAGGAGGAGGLFGAGGMGGAGGFGDHGTL 300 Query 301 GTGGAGGDGGGGGLFGAGGDGGAGGSGLTTGGAAGNGGNAGTLSLGAAGGAGGTGGAGGT 360 GTGGAGGDGGGGGLFGAGGDGGAGGSGLTTGGAAGNGGNAGTLSLGAAGGAGGTGGAGGT Sbjct 301 GTGGAGGDGGGGGLFGAGGDGGAGGSGLTTGGAAGNGGNAGTLSLGAAGGAGGTGGAGGT 360 Query 361 VFGGGKGGAGGAGGNAGMLFGSGGGGGTGGFGFAAGGQGGVGGSAGMLSGSGGSGGAGGS 420 VFGGGKGGAGGAGGNAGMLFGSGGGGGTGGFGFAAGGQGGVGGSAGMLSGSGGSGGAGGS Sbjct 361 VFGGGKGGAGGAGGNAGMLFGSGGGGGTGGFGFAAGGQGGVGGSAGMLSGSGGSGGAGGS 420 Query 421 GGPAGTAAGGAGGAGGAPGLIGNGGNGGNGGESGGTGGVGGAGGNAVLIGNGGEGGIGAL 480 GGPAGTAAGGAGGAGGAPGLIGNGGNGGNGGESGGTGGVGGAGGNAVLIGNGGEGGIGAL Sbjct 421 GGPAGTAAGGAGGAGGAPGLIGNGGNGGNGGESGGTGGVGGAGGNAVLIGNGGEGGIGAL 480 Query 481 AGKSGFGGFGGLLLGADGYNAPESTSPWHNLQQDILSFINEPTEALTGRPLIGNGDSGTP 540 AGKSGFGGFGGLLLGADGYNAPESTSPWHNLQQDILSFINEPTEALTGRPLIGNGDSGTP Sbjct 481 AGKSGFGGFGGLLLGADGYNAPESTSPWHNLQQDILSFINEPTEALTGRPLIGNGDSGTP 540 Query 541 GTGDDGGAGGWLFGNGGNGGAGAAGTNGSAGGAGGAGGILFGTGGAGGAGGVGTAGAGGA 600 GTGDDGGAGGWLFGNGGNGGAGAAGTNGSAGGAGGAGGILFGTGGAGGAGGVGTAGAGGA Sbjct 541 GTGDDGGAGGWLFGNGGNGGAGAAGTNGSAGGAGGAGGILFGTGGAGGAGGVGTAGAGGA 600 Query 601 GGAGGSAFLIGSGGTGGVGGAATTTGGVGGAGGNAGLLIGAAGLGGCGGGAFTAGVTTGG 660 GGAGGSAFLIGSGGTGGVGGAATTTGGVGGAGGNAGLLIGAAGLGGCGGGAFTAGVTTGG Sbjct 601 GGAGGSAFLIGSGGTGGVGGAATTTGGVGGAGGNAGLLIGAAGLGGCGGGAFTAGVTTGG 660 Query 661 AGGTGGAAGLFANGGAGGAGGTGSTAGGAGGAGGAGGLYAHGGTGGPGGNGGSTGAGGTG 720 AGGTGGAAGLFANGGAGGAGGTGSTAGGAGGAGGAGGLYAHGGTGGPGGNGGSTGAGGTG Sbjct 661 AGGTGGAAGLFANGGAGGAGGTGSTAGGAGGAGGAGGLYAHGGTGGPGGNGGSTGAGGTG 720 Query 721 GAGGPGGLYGAGGSGGAGGHGGMAGGGGGVGGNAGSLTLNASGGAGGSGGSSLSGKAGAG 780 GAGGPGGLYGAGGSGGAGGHGGMAGGGGGVGGNAGSLTLNASGGAGGSGGSSLSGKAGAG Sbjct 721 GAGGPGGLYGAGGSGGAGGHGGMAGGGGGVGGNAGSLTLNASGGAGGSGGSSLSGKAGAG 780 Query 781 GAGGSAGLFYGSGGAGGNGGYSLNGTGGDGGTGGAGQITGLRSGFGGAGGAGGASDTGAG 840 GAGGSAGLFYGSGGAGGNGGYSLNGTGGDGGTGGAGQITGLRSGFGGAGGAGGASDTGAG Sbjct 781 GAGGSAGLFYGSGGAGGNGGYSLNGTGGDGGTGGAGQITGLRSGFGGAGGAGGASDTGAG 840 Query 841 GNGGAGGKAGLYGNGGDGGAGGDGATSGKGGAGGNAVVIGNGGNGGNAGKAGGTAGAGGA 900 GNGGAGGKAGLYGNGGDGGAGGDGATSGKGGAGGNAVVIGNGGNGGNAGKAGGTAGAGGA Sbjct 841 GNGGAGGKAGLYGNGGDGGAGGDGATSGKGGAGGNAVVIGNGGNGGNAGKAGGTAGAGGA 900 Query 901 GGLVLGRDGQHGLT 914 GGLVLGRDGQHGLT Sbjct 901 GGLVLGRDGQHGLT 914 >gi|344219580|gb|AEN00211.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2] Length=914 Score = 1456 bits (3768), Expect = 0.0, Method: Compositional matrix adjust. Identities = 913/914 (99%), Positives = 913/914 (99%), Gaps = 0/914 (0%) Query 1 MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR 60 MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR Sbjct 1 MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR 60 Query 61 AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPLLNSINAPVLAATGRPLIGNGAN 120 AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPLLNSINAPVLAATGRPLIGNGAN Sbjct 61 AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPLLNSINAPVLAATGRPLIGNGAN 120 Query 121 GAPGTGANGGDAGWLIGNGGAGGSGAKGANGGAGGPGGAAGLFGNGGAGGAGGTATANNG 180 GAPGTGANGGDAGWLIGNGGAGGSGAKGANGGAGGPGGAAGLFGNGGAGGAGGTATANNG Sbjct 121 GAPGTGANGGDAGWLIGNGGAGGSGAKGANGGAGGPGGAAGLFGNGGAGGAGGTATANNG 180 Query 181 IGGAGGAGGSAMLFGAGGAGGAGGAATSLVGGIGGTGGTGGNAGMLAGAAGAGGAGGFSF 240 IGGAGGAGGSAMLFGAGGAGGAGGAATSLVGGIGGTGGTGGNAGMLAGAAGAGGAGGFSF Sbjct 181 IGGAGGAGGSAMLFGAGGAGGAGGAATSLVGGIGGTGGTGGNAGMLAGAAGAGGAGGFSF 240 Query 241 STAGGAGGAGGAGGLFTTGGVGGAGGQGHTGGAGGAGGAGGLFGAGGMGGAGGFGDHGTL 300 STAGGAGGAGGAGGLFTTGGVGGAGGQGHTGGAGGAGGAGGLFGAGGMGGAGGFGDHGTL Sbjct 241 STAGGAGGAGGAGGLFTTGGVGGAGGQGHTGGAGGAGGAGGLFGAGGMGGAGGFGDHGTL 300 Query 301 GTGGAGGDGGGGGLFGAGGDGGAGGSGLTTGGAAGNGGNAGTLSLGAAGGAGGTGGAGGT 360 GTGGAGGDGGGGGLFGAGGDGGAGGSGLTTGGAAGNGGNAGTLSLGAAGGAGGTGGAGGT Sbjct 301 GTGGAGGDGGGGGLFGAGGDGGAGGSGLTTGGAAGNGGNAGTLSLGAAGGAGGTGGAGGT 360 Query 361 VFGGGKGGAGGAGGNAGMLFGSGGGGGTGGFGFAAGGQGGVGGSAGMLSGSGGSGGAGGS 420 VFGGGKGGAGGAGGNAGMLFGSGGGGGTGGFGFAAGGQGGVGGSAGMLSGSGGSGGAGGS Sbjct 361 VFGGGKGGAGGAGGNAGMLFGSGGGGGTGGFGFAAGGQGGVGGSAGMLSGSGGSGGAGGS 420 Query 421 GGPAGTAAGGAGGAGGAPGLIGNGGNGGNGGESGGTGGVGGAGGNAVLIGNGGEGGIGAL 480 GGPAGTAAGGAGGAGGAPGLIGNGGNGGNGGESGGTGGVGGAGGNAVLIGNGGEGGIGAL Sbjct 421 GGPAGTAAGGAGGAGGAPGLIGNGGNGGNGGESGGTGGVGGAGGNAVLIGNGGEGGIGAL 480 Query 481 AGKSGFGGFGGLLLGADGYNAPESTSPWHNLQQDILSFINEPTEALTGRPLIGNGDSGTP 540 AGKSGFGGFGGLLLGADGYNAPESTSPWHNLQQDILSFINEPTEALTGRPLIGNGDSGTP Sbjct 481 AGKSGFGGFGGLLLGADGYNAPESTSPWHNLQQDILSFINEPTEALTGRPLIGNGDSGTP 540 Query 541 GTGDDGGAGGWLFGNGGNGGAGAAGTNGSAGGAGGAGGILFGTGGAGGAGGVGTAGAGGA 600 GTGDDGGAGGWL GNGGNGGAGAAGTNGSAGGAGGAGGILFGTGGAGGAGGVGTAGAGGA Sbjct 541 GTGDDGGAGGWLLGNGGNGGAGAAGTNGSAGGAGGAGGILFGTGGAGGAGGVGTAGAGGA 600 Query 601 GGAGGSAFLIGSGGTGGVGGAATTTGGVGGAGGNAGLLIGAAGLGGCGGGAFTAGVTTGG 660 GGAGGSAFLIGSGGTGGVGGAATTTGGVGGAGGNAGLLIGAAGLGGCGGGAFTAGVTTGG Sbjct 601 GGAGGSAFLIGSGGTGGVGGAATTTGGVGGAGGNAGLLIGAAGLGGCGGGAFTAGVTTGG 660 Query 661 AGGTGGAAGLFANGGAGGAGGTGSTAGGAGGAGGAGGLYAHGGTGGPGGNGGSTGAGGTG 720 AGGTGGAAGLFANGGAGGAGGTGSTAGGAGGAGGAGGLYAHGGTGGPGGNGGSTGAGGTG Sbjct 661 AGGTGGAAGLFANGGAGGAGGTGSTAGGAGGAGGAGGLYAHGGTGGPGGNGGSTGAGGTG 720 Query 721 GAGGPGGLYGAGGSGGAGGHGGMAGGGGGVGGNAGSLTLNASGGAGGSGGSSLSGKAGAG 780 GAGGPGGLYGAGGSGGAGGHGGMAGGGGGVGGNAGSLTLNASGGAGGSGGSSLSGKAGAG Sbjct 721 GAGGPGGLYGAGGSGGAGGHGGMAGGGGGVGGNAGSLTLNASGGAGGSGGSSLSGKAGAG 780 Query 781 GAGGSAGLFYGSGGAGGNGGYSLNGTGGDGGTGGAGQITGLRSGFGGAGGAGGASDTGAG 840 GAGGSAGLFYGSGGAGGNGGYSLNGTGGDGGTGGAGQITGLRSGFGGAGGAGGASDTGAG Sbjct 781 GAGGSAGLFYGSGGAGGNGGYSLNGTGGDGGTGGAGQITGLRSGFGGAGGAGGASDTGAG 840 Query 841 GNGGAGGKAGLYGNGGDGGAGGDGATSGKGGAGGNAVVIGNGGNGGNAGKAGGTAGAGGA 900 GNGGAGGKAGLYGNGGDGGAGGDGATSGKGGAGGNAVVIGNGGNGGNAGKAGGTAGAGGA Sbjct 841 GNGGAGGKAGLYGNGGDGGAGGDGATSGKGGAGGNAVVIGNGGNGGNAGKAGGTAGAGGA 900 Query 901 GGLVLGRDGQHGLT 914 GGLVLGRDGQHGLT Sbjct 901 GGLVLGRDGQHGLT 914 >gi|289554468|ref|ZP_06443678.1| predicted protein [Mycobacterium tuberculosis KZN 605] gi|289439100|gb|EFD21593.1| predicted protein [Mycobacterium tuberculosis KZN 605] Length=954 Score = 1451 bits (3756), Expect = 0.0, Method: Compositional matrix adjust. Identities = 913/914 (99%), Positives = 913/914 (99%), Gaps = 0/914 (0%) Query 1 MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR 60 MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR Sbjct 41 MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR 100 Query 61 AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPLLNSINAPVLAATGRPLIGNGAN 120 AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPLLNSINAPVLAATGRPLIGNGAN Sbjct 101 AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPLLNSINAPVLAATGRPLIGNGAN 160 Query 121 GAPGTGANGGDAGWLIGNGGAGGSGAKGANGGAGGPGGAAGLFGNGGAGGAGGTATANNG 180 GAPGTGANGGDAGWLIGNGGAGGSGAKGANGGAGGPGGAAGLFGNGGAGGAGGTATANNG Sbjct 161 GAPGTGANGGDAGWLIGNGGAGGSGAKGANGGAGGPGGAAGLFGNGGAGGAGGTATANNG 220 Query 181 IGGAGGAGGSAMLFGAGGAGGAGGAATSLVGGIGGTGGTGGNAGMLAGAAGAGGAGGFSF 240 IGGAGGAGGSAMLFGAGGAGGAGGAATSLVGGIGGTGGTGGNAGMLAGAAGAGGAGGFSF Sbjct 221 IGGAGGAGGSAMLFGAGGAGGAGGAATSLVGGIGGTGGTGGNAGMLAGAAGAGGAGGFSF 280 Query 241 STAGGAGGAGGAGGLFTTGGVGGAGGQGHTGGAGGAGGAGGLFGAGGMGGAGGFGDHGTL 300 STAGGAGGAGGAGGLFTTGGVGGAGGQGHTGGAGGAGGAGGLFGAGGMGGAGGFGDHGTL Sbjct 281 STAGGAGGAGGAGGLFTTGGVGGAGGQGHTGGAGGAGGAGGLFGAGGMGGAGGFGDHGTL 340 Query 301 GTGGAGGDGGGGGLFGAGGDGGAGGSGLTTGGAAGNGGNAGTLSLGAAGGAGGTGGAGGT 360 GTGGAGGDGGGGGLFGAGGDGGAGGSGLTTGGAAGNGGNAGTLSLGAAGGAGGTGGAGGT Sbjct 341 GTGGAGGDGGGGGLFGAGGDGGAGGSGLTTGGAAGNGGNAGTLSLGAAGGAGGTGGAGGT 400 Query 361 VFGGGKGGAGGAGGNAGMLFGSGGGGGTGGFGFAAGGQGGVGGSAGMLSGSGGSGGAGGS 420 VFGGGKGGAGGAGGNAGMLFGSGGGGGTGGFGFAAGGQGGVGGSAGMLSGSGGSGGAGGS Sbjct 401 VFGGGKGGAGGAGGNAGMLFGSGGGGGTGGFGFAAGGQGGVGGSAGMLSGSGGSGGAGGS 460 Query 421 GGPAGTAAGGAGGAGGAPGLIGNGGNGGNGGESGGTGGVGGAGGNAVLIGNGGEGGIGAL 480 GGPAGTAAGGAGGAGGAPGLIGNGGNGGNGGESGGTGGVGGAGGNAVLIGNGGEGGIGAL Sbjct 461 GGPAGTAAGGAGGAGGAPGLIGNGGNGGNGGESGGTGGVGGAGGNAVLIGNGGEGGIGAL 520 Query 481 AGKSGFGGFGGLLLGADGYNAPESTSPWHNLQQDILSFINEPTEALTGRPLIGNGDSGTP 540 AGKSGFGGFGGLLLGADGYNAPESTSPWHNLQQDILSFINEPTEALTGRPLIGNGDSGTP Sbjct 521 AGKSGFGGFGGLLLGADGYNAPESTSPWHNLQQDILSFINEPTEALTGRPLIGNGDSGTP 580 Query 541 GTGDDGGAGGWLFGNGGNGGAGAAGTNGSAGGAGGAGGILFGTGGAGGAGGVGTAGAGGA 600 GTGDDGGAGGWL GNGGNGGAGAAGTNGSAGGAGGAGGILFGTGGAGGAGGVGTAGAGGA Sbjct 581 GTGDDGGAGGWLLGNGGNGGAGAAGTNGSAGGAGGAGGILFGTGGAGGAGGVGTAGAGGA 640 Query 601 GGAGGSAFLIGSGGTGGVGGAATTTGGVGGAGGNAGLLIGAAGLGGCGGGAFTAGVTTGG 660 GGAGGSAFLIGSGGTGGVGGAATTTGGVGGAGGNAGLLIGAAGLGGCGGGAFTAGVTTGG Sbjct 641 GGAGGSAFLIGSGGTGGVGGAATTTGGVGGAGGNAGLLIGAAGLGGCGGGAFTAGVTTGG 700 Query 661 AGGTGGAAGLFANGGAGGAGGTGSTAGGAGGAGGAGGLYAHGGTGGPGGNGGSTGAGGTG 720 AGGTGGAAGLFANGGAGGAGGTGSTAGGAGGAGGAGGLYAHGGTGGPGGNGGSTGAGGTG Sbjct 701 AGGTGGAAGLFANGGAGGAGGTGSTAGGAGGAGGAGGLYAHGGTGGPGGNGGSTGAGGTG 760 Query 721 GAGGPGGLYGAGGSGGAGGHGGMAGGGGGVGGNAGSLTLNASGGAGGSGGSSLSGKAGAG 780 GAGGPGGLYGAGGSGGAGGHGGMAGGGGGVGGNAGSLTLNASGGAGGSGGSSLSGKAGAG Sbjct 761 GAGGPGGLYGAGGSGGAGGHGGMAGGGGGVGGNAGSLTLNASGGAGGSGGSSLSGKAGAG 820 Query 781 GAGGSAGLFYGSGGAGGNGGYSLNGTGGDGGTGGAGQITGLRSGFGGAGGAGGASDTGAG 840 GAGGSAGLFYGSGGAGGNGGYSLNGTGGDGGTGGAGQITGLRSGFGGAGGAGGASDTGAG Sbjct 821 GAGGSAGLFYGSGGAGGNGGYSLNGTGGDGGTGGAGQITGLRSGFGGAGGAGGASDTGAG 880 Query 841 GNGGAGGKAGLYGNGGDGGAGGDGATSGKGGAGGNAVVIGNGGNGGNAGKAGGTAGAGGA 900 GNGGAGGKAGLYGNGGDGGAGGDGATSGKGGAGGNAVVIGNGGNGGNAGKAGGTAGAGGA Sbjct 881 GNGGAGGKAGLYGNGGDGGAGGDGATSGKGGAGGNAVVIGNGGNGGNAGKAGGTAGAGGA 940 Query 901 GGLVLGRDGQHGLT 914 GGLVLGRDGQHGLT Sbjct 941 GGLVLGRDGQHGLT 954 >gi|253799200|ref|YP_003032201.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435] gi|253320703|gb|ACT25306.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435] gi|328458955|gb|AEB04378.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207] Length=950 Score = 1447 bits (3746), Expect = 0.0, Method: Compositional matrix adjust. Identities = 913/914 (99%), Positives = 913/914 (99%), Gaps = 0/914 (0%) Query 1 MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR 60 MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR Sbjct 37 MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR 96 Query 61 AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPLLNSINAPVLAATGRPLIGNGAN 120 AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPLLNSINAPVLAATGRPLIGNGAN Sbjct 97 AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPLLNSINAPVLAATGRPLIGNGAN 156 Query 121 GAPGTGANGGDAGWLIGNGGAGGSGAKGANGGAGGPGGAAGLFGNGGAGGAGGTATANNG 180 GAPGTGANGGDAGWLIGNGGAGGSGAKGANGGAGGPGGAAGLFGNGGAGGAGGTATANNG Sbjct 157 GAPGTGANGGDAGWLIGNGGAGGSGAKGANGGAGGPGGAAGLFGNGGAGGAGGTATANNG 216 Query 181 IGGAGGAGGSAMLFGAGGAGGAGGAATSLVGGIGGTGGTGGNAGMLAGAAGAGGAGGFSF 240 IGGAGGAGGSAMLFGAGGAGGAGGAATSLVGGIGGTGGTGGNAGMLAGAAGAGGAGGFSF Sbjct 217 IGGAGGAGGSAMLFGAGGAGGAGGAATSLVGGIGGTGGTGGNAGMLAGAAGAGGAGGFSF 276 Query 241 STAGGAGGAGGAGGLFTTGGVGGAGGQGHTGGAGGAGGAGGLFGAGGMGGAGGFGDHGTL 300 STAGGAGGAGGAGGLFTTGGVGGAGGQGHTGGAGGAGGAGGLFGAGGMGGAGGFGDHGTL Sbjct 277 STAGGAGGAGGAGGLFTTGGVGGAGGQGHTGGAGGAGGAGGLFGAGGMGGAGGFGDHGTL 336 Query 301 GTGGAGGDGGGGGLFGAGGDGGAGGSGLTTGGAAGNGGNAGTLSLGAAGGAGGTGGAGGT 360 GTGGAGGDGGGGGLFGAGGDGGAGGSGLTTGGAAGNGGNAGTLSLGAAGGAGGTGGAGGT Sbjct 337 GTGGAGGDGGGGGLFGAGGDGGAGGSGLTTGGAAGNGGNAGTLSLGAAGGAGGTGGAGGT 396 Query 361 VFGGGKGGAGGAGGNAGMLFGSGGGGGTGGFGFAAGGQGGVGGSAGMLSGSGGSGGAGGS 420 VFGGGKGGAGGAGGNAGMLFGSGGGGGTGGFGFAAGGQGGVGGSAGMLSGSGGSGGAGGS Sbjct 397 VFGGGKGGAGGAGGNAGMLFGSGGGGGTGGFGFAAGGQGGVGGSAGMLSGSGGSGGAGGS 456 Query 421 GGPAGTAAGGAGGAGGAPGLIGNGGNGGNGGESGGTGGVGGAGGNAVLIGNGGEGGIGAL 480 GGPAGTAAGGAGGAGGAPGLIGNGGNGGNGGESGGTGGVGGAGGNAVLIGNGGEGGIGAL Sbjct 457 GGPAGTAAGGAGGAGGAPGLIGNGGNGGNGGESGGTGGVGGAGGNAVLIGNGGEGGIGAL 516 Query 481 AGKSGFGGFGGLLLGADGYNAPESTSPWHNLQQDILSFINEPTEALTGRPLIGNGDSGTP 540 AGKSGFGGFGGLLLGADGYNAPESTSPWHNLQQDILSFINEPTEALTGRPLIGNGDSGTP Sbjct 517 AGKSGFGGFGGLLLGADGYNAPESTSPWHNLQQDILSFINEPTEALTGRPLIGNGDSGTP 576 Query 541 GTGDDGGAGGWLFGNGGNGGAGAAGTNGSAGGAGGAGGILFGTGGAGGAGGVGTAGAGGA 600 GTGDDGGAGGWL GNGGNGGAGAAGTNGSAGGAGGAGGILFGTGGAGGAGGVGTAGAGGA Sbjct 577 GTGDDGGAGGWLLGNGGNGGAGAAGTNGSAGGAGGAGGILFGTGGAGGAGGVGTAGAGGA 636 Query 601 GGAGGSAFLIGSGGTGGVGGAATTTGGVGGAGGNAGLLIGAAGLGGCGGGAFTAGVTTGG 660 GGAGGSAFLIGSGGTGGVGGAATTTGGVGGAGGNAGLLIGAAGLGGCGGGAFTAGVTTGG Sbjct 637 GGAGGSAFLIGSGGTGGVGGAATTTGGVGGAGGNAGLLIGAAGLGGCGGGAFTAGVTTGG 696 Query 661 AGGTGGAAGLFANGGAGGAGGTGSTAGGAGGAGGAGGLYAHGGTGGPGGNGGSTGAGGTG 720 AGGTGGAAGLFANGGAGGAGGTGSTAGGAGGAGGAGGLYAHGGTGGPGGNGGSTGAGGTG Sbjct 697 AGGTGGAAGLFANGGAGGAGGTGSTAGGAGGAGGAGGLYAHGGTGGPGGNGGSTGAGGTG 756 Query 721 GAGGPGGLYGAGGSGGAGGHGGMAGGGGGVGGNAGSLTLNASGGAGGSGGSSLSGKAGAG 780 GAGGPGGLYGAGGSGGAGGHGGMAGGGGGVGGNAGSLTLNASGGAGGSGGSSLSGKAGAG Sbjct 757 GAGGPGGLYGAGGSGGAGGHGGMAGGGGGVGGNAGSLTLNASGGAGGSGGSSLSGKAGAG 816 Query 781 GAGGSAGLFYGSGGAGGNGGYSLNGTGGDGGTGGAGQITGLRSGFGGAGGAGGASDTGAG 840 GAGGSAGLFYGSGGAGGNGGYSLNGTGGDGGTGGAGQITGLRSGFGGAGGAGGASDTGAG Sbjct 817 GAGGSAGLFYGSGGAGGNGGYSLNGTGGDGGTGGAGQITGLRSGFGGAGGAGGASDTGAG 876 Query 841 GNGGAGGKAGLYGNGGDGGAGGDGATSGKGGAGGNAVVIGNGGNGGNAGKAGGTAGAGGA 900 GNGGAGGKAGLYGNGGDGGAGGDGATSGKGGAGGNAVVIGNGGNGGNAGKAGGTAGAGGA Sbjct 877 GNGGAGGKAGLYGNGGDGGAGGDGATSGKGGAGGNAVVIGNGGNGGNAGKAGGTAGAGGA 936 Query 901 GGLVLGRDGQHGLT 914 GGLVLGRDGQHGLT Sbjct 937 GGLVLGRDGQHGLT 950 >gi|297634316|ref|ZP_06952096.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207] Length=657 Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 136/136 (100%), Positives = 136/136 (100%), Gaps = 0/136 (0%) Query 1 MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR 60 MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR Sbjct 37 MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR 96 Query 61 AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPLLNSINAPVLAATGRPLIGNGAN 120 AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPLLNSINAPVLAATGRPLIGNGAN Sbjct 97 AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPLLNSINAPVLAATGRPLIGNGAN 156 Query 121 GAPGTGANGGDAGWLI 136 GAPGTGANGGDAGWLI Sbjct 157 GAPGTGANGGDAGWLI 172 >gi|339294426|gb|AEJ46537.1| putative PE family protein [Mycobacterium tuberculosis CCDC5079] Length=1330 Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 71/122 (59%), Positives = 87/122 (72%), Gaps = 7/122 (5%) Query 1 MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR 60 MS VI PET+AAAA+D+A +GS+I AN+AAA +TTS+LAAGADE+SAAIA LFG+H R Sbjct 2 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 61 Query 61 AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPL-------LNSINAPVLAATGRP 113 YQA S + AAFH RF Q L+ G+Y +AEA PL LN++NAP A GRP Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121 Query 114 LI 115 LI Sbjct 122 LI 123 >gi|339631517|ref|YP_004723159.1| PE-PGRS family protein [Mycobacterium africanum GM041182] gi|339330873|emb|CCC26544.1| PE-PGRS family protein [Mycobacterium africanum GM041182] Length=1389 Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 71/122 (59%), Positives = 86/122 (71%), Gaps = 7/122 (5%) Query 1 MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR 60 MS VI PET+AAAA D+A +GS+I AN+AAA +TTS+LAAGADE+SAAIA LFG+H R Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 61 AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPL-------LNSINAPVLAATGRP 113 YQA S + AAFH RF Q L+ G+Y +AEA PL LN++NAP A GRP Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 114 LI 115 LI Sbjct 121 LI 122 >gi|31792644|ref|NP_855137.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97] gi|31618234|emb|CAD96152.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97] Length=1408 Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 71/122 (59%), Positives = 86/122 (71%), Gaps = 7/122 (5%) Query 1 MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR 60 MS VI PET+AAAA D+A +GS+I AN+AAA +TTS+LAAGADE+SAAIA LFG+H R Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 61 AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPL-------LNSINAPVLAATGRP 113 YQA S + AAFH RF Q L+ G+Y +AEA PL LN++NAP A GRP Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 114 LI 115 LI Sbjct 121 LI 122 >gi|183984370|ref|YP_001852661.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183177696|gb|ACC42806.1| PE-PGRS family protein [Mycobacterium marinum M] Length=910 Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 82/132 (63%), Positives = 103/132 (79%), Gaps = 3/132 (2%) Query 1 MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR 60 MS+VIAVP+ +A AA++LA +GST++ A AAAA TT +LAA DE+SAAIAA+F AHG+ Sbjct 1 MSYVIAVPDLVAGAASELAGVGSTLSTATTAAAAQTTGVLAAAGDEVSAAIAAVFSAHGQ 60 Query 61 AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTP---LLNSINAPVLAATGRPLIGN 117 +YQ SA+A FH +FVQAL+ G AY AEAA+ +P LL +INAPV + TGRPLIGN Sbjct 61 SYQTLSAQAETFHAQFVQALSAGASAYTQAEAASASPLAGLLAAINAPVQSLTGRPLIGN 120 Query 118 GANGAPGTGANG 129 GANG PGTGA+G Sbjct 121 GANGTPGTGADG 132 Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust. Identities = 18/23 (79%), Positives = 20/23 (87%), Gaps = 0/23 (0%) Query 99 LNSINAPVLAATGRPLIGNGANG 121 LN+INAP+ AATGRPLIGNG G Sbjct 498 LNAINAPIQAATGRPLIGNGTPG 520 >gi|339298064|gb|AEJ50174.1| putative PE family protein [Mycobacterium tuberculosis CCDC5180] Length=1330 Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 70/122 (58%), Positives = 87/122 (72%), Gaps = 7/122 (5%) Query 1 MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR 60 MS VI PET+AAAA+D+A +GS+I AN+AAA +TTS+LAAGAD++SAAIA LFG+H R Sbjct 2 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADDVSAAIATLFGSHAR 61 Query 61 AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPL-------LNSINAPVLAATGRP 113 YQA S + AAFH RF Q L+ G+Y +AEA PL LN++NAP A GRP Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121 Query 114 LI 115 LI Sbjct 122 LI 123 >gi|183982116|ref|YP_001850407.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183175442|gb|ACC40552.1| PE-PGRS family protein [Mycobacterium marinum M] Length=1386 Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 72/123 (59%), Positives = 85/123 (70%), Gaps = 9/123 (7%) Query 1 MSFV-IAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHG 59 MSFV +A PE +A AA+DL LGSTI+ AN AAA +TT++LAAGADE+SA IAALFG H Sbjct 1 MSFVGVA-PEMVAVAASDLERLGSTISAANVAAAGSTTTILAAGADEVSAVIAALFGTHA 59 Query 60 RAYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTP-------LLNSINAPVLAATGR 112 YQA S + + FH +FVQ LT G GAY+AAE V P LLN +NAP A GR Sbjct 60 LEYQAISTQLSVFHEQFVQTLTNGVGAYSAAELVNVLPLQNVEQDLLNLVNAPTQALFGR 119 Query 113 PLI 115 PLI Sbjct 120 PLI 122 Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust. Identities = 18/36 (50%), Positives = 26/36 (73%), Gaps = 2/36 (5%) Query 499 YNAPESTS--PWHNLQQDILSFINEPTEALTGRPLI 532 Y+A E + P N++QD+L+ +N PT+AL GRPLI Sbjct 87 YSAAELVNVLPLQNVEQDLLNLVNAPTQALFGRPLI 122 >gi|183981229|ref|YP_001849520.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183174555|gb|ACC39665.1| PE-PGRS family protein [Mycobacterium marinum M] Length=946 Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 71/123 (58%), Positives = 86/123 (70%), Gaps = 3/123 (2%) Query 1 MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR 60 M+FV+ PE + AAA+DLA++GS I AN A AA T LLAAG DE+S AIA+LF H Sbjct 1 MAFVLVAPEMVTAAASDLANIGSAINTANTAVAAPTAELLAAGTDEVSEAIASLFSGHAL 60 Query 61 AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTP---LLNSINAPVLAATGRPLIGN 117 YQ+ A AFH +FV ALT GGG Y++AEAAA TP LLN +NAP A GRPLIG+ Sbjct 61 DYQSLGARMTAFHDQFVAALTAGGGLYSSAEAAAATPLQDLLNVVNAPTQALLGRPLIGD 120 Query 118 GAN 120 GA+ Sbjct 121 GAD 123 Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust. Identities = 15/23 (66%), Positives = 20/23 (87%), Gaps = 0/23 (0%) Query 513 QDILSFINEPTEALTGRPLIGNG 535 QD+L+ +N PT+AL GRPLIG+G Sbjct 99 QDLLNVVNAPTQALLGRPLIGDG 121 >gi|183981230|ref|YP_001849521.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183174556|gb|ACC39666.1| PE-PGRS family protein [Mycobacterium marinum M] Length=963 Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 71/123 (58%), Positives = 86/123 (70%), Gaps = 3/123 (2%) Query 1 MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR 60 M+FV+ PE + AAA+DLA++GS I AN A AA T LLAAG DE+S AIA+LF H Sbjct 1 MAFVLVAPEMVTAAASDLANIGSAINTANTAVAAPTAELLAAGTDEVSEAIASLFSGHAL 60 Query 61 AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTP---LLNSINAPVLAATGRPLIGN 117 YQ+ A AFH +FV ALT GGG Y++AEAAA TP LLN +NAP A GRPLIG+ Sbjct 61 DYQSLGARMTAFHDQFVAALTAGGGLYSSAEAAAATPLQDLLNVVNAPTQALLGRPLIGD 120 Query 118 GAN 120 GA+ Sbjct 121 GAD 123 Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust. Identities = 15/23 (66%), Positives = 20/23 (87%), Gaps = 0/23 (0%) Query 513 QDILSFINEPTEALTGRPLIGNG 535 QD+L+ +N PT+AL GRPLIG+G Sbjct 99 QDLLNVVNAPTQALLGRPLIGDG 121 >gi|340626466|ref|YP_004744918.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] gi|340004656|emb|CCC43800.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] Length=1006 Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 69/122 (57%), Positives = 84/122 (69%), Gaps = 7/122 (5%) Query 1 MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR 60 MS VI PE +AAAA+D+A +GS AN+ AA +TTS+LAAGADE+SAAIA LFG+H R Sbjct 1 MSLVIVTPELVAAAASDVARIGSGFGAANSTAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 61 AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPL-------LNSINAPVLAATGRP 113 YQA S + AAFH RFVQ L+ G+Y +AEA PL LN++NAP A GRP Sbjct 61 EYQAISTQVAAFHDRFVQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 114 LI 115 LI Sbjct 121 LI 122 >gi|253797511|ref|YP_003030512.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435] gi|253319014|gb|ACT23617.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435] gi|328457295|gb|AEB02718.1| hypothetical protein TBSG_00589 [Mycobacterium tuberculosis KZN 4207] gi|344218399|gb|AEM99029.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2] Length=1303 Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 69/124 (56%), Positives = 82/124 (67%), Gaps = 2/124 (1%) Query 1 MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR 60 MSFVIA PE + AATDLA +GST A AAA +L A ADE+S A+AALFG H + Sbjct 1 MSFVIATPEMLTTAATDLAKIGST-ITAANTAAAAVAKVLPASADEVSVAVAALFGTHAQ 59 Query 61 AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTP-LLNSINAPVLAATGRPLIGNGA 119 YQ SA+ A FH RFVQ L+ +Y AAEA V LL ++NAP A GRPLIGNGA Sbjct 60 EYQTVSAQVATFHDRFVQTLSATASSYVAAEAVNVEQSLLAAVNAPTQALFGRPLIGNGA 119 Query 120 NGAP 123 +G+P Sbjct 120 DGSP 123 Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust. Identities = 21/45 (47%), Positives = 30/45 (67%), Gaps = 4/45 (8%) Query 496 ADGYNAPESTSPWHNLQQDILSFINEPTEALTGRPLIGNGDSGTP 540 A Y A E+ + ++Q +L+ +N PT+AL GRPLIGNG G+P Sbjct 83 ASSYVAAEAVN----VEQSLLAAVNAPTQALFGRPLIGNGADGSP 123 >gi|340628625|ref|YP_004747077.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] gi|340006815|emb|CCC46004.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] Length=901 Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 103/139 (75%), Positives = 116/139 (84%), Gaps = 4/139 (2%) Query 1 MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR 60 MS+VIA PE + AAATDLA LGSTI ANAAAA +TT+LLAAGADE+SAAIAALFG HG+ Sbjct 101 MSYVIAAPEALVAAATDLATLGSTIGAANAAAAGSTTALLAAGADEVSAAIAALFGMHGQ 160 Query 61 AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPL---LNSINAPVLAATGRPLIGN 117 YQA SA AAAFH RFVQAL TGGGAYAAAEAA+ +PL L+ +NAP A GRPLIGN Sbjct 161 TYQALSARAAAFHERFVQALATGGGAYAAAEAASASPLQGALDLLNAPTQALLGRPLIGN 220 Query 118 GANGAPGTGANGGDAGWLI 136 GANGAPG+GANGGD GW++ Sbjct 221 GANGAPGSGANGGD-GWIL 238 Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust. Identities = 23/38 (61%), Positives = 28/38 (74%), Gaps = 0/38 (0%) Query 516 LSFINEPTEALTGRPLIGNGDSGTPGTGDDGGAGGWLF 553 L +N PT+AL GRPLIGNG +G PG+G +GG G LF Sbjct 202 LDLLNAPTQALLGRPLIGNGANGAPGSGANGGDGWILF 239 >gi|289552831|ref|ZP_06442041.1| LOW QUALITY PROTEIN: predicted protein [Mycobacterium tuberculosis KZN 605] gi|289437463|gb|EFD19956.1| LOW QUALITY PROTEIN: predicted protein [Mycobacterium tuberculosis KZN 605] Length=998 Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 69/124 (56%), Positives = 82/124 (67%), Gaps = 2/124 (1%) Query 1 MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR 60 MSFVIA PE + AATDLA +GST A AAA +L A ADE+S A+AALFG H + Sbjct 1 MSFVIATPEMLTTAATDLAKIGST-ITAANTAAAAVAKVLPASADEVSVAVAALFGTHAQ 59 Query 61 AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTP-LLNSINAPVLAATGRPLIGNGA 119 YQ SA+ A FH RFVQ L+ +Y AAEA V LL ++NAP A GRPLIGNGA Sbjct 60 EYQTVSAQVATFHDRFVQTLSATASSYVAAEAVNVEQSLLAAVNAPTQALFGRPLIGNGA 119 Query 120 NGAP 123 +G+P Sbjct 120 DGSP 123 Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust. Identities = 21/45 (47%), Positives = 30/45 (67%), Gaps = 4/45 (8%) Query 496 ADGYNAPESTSPWHNLQQDILSFINEPTEALTGRPLIGNGDSGTP 540 A Y A E+ + ++Q +L+ +N PT+AL GRPLIGNG G+P Sbjct 83 ASSYVAAEAVN----VEQSLLAAVNAPTQALFGRPLIGNGADGSP 123 >gi|183982114|ref|YP_001850405.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183175440|gb|ACC40550.1| PE-PGRS family protein [Mycobacterium marinum M] Length=1397 Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 74/121 (62%), Positives = 87/121 (72%), Gaps = 1/121 (0%) Query 1 MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR 60 MSFV PE + AAA+DL+ + S IA AN+ AAA TT++L A ADE+SAAIAALFG H + Sbjct 1 MSFVSVTPEMVVAAASDLSGINSAIAQANSVAAAATTTVLPAAADEVSAAIAALFGTHAQ 60 Query 61 AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTP-LLNSINAPVLAATGRPLIGNGA 119 YQA SAE AAFH RFVQ+L TG G+Y AEAA LL +NAP A GRPLIG+GA Sbjct 61 QYQAISAELAAFHDRFVQSLNTGAGSYLRAEAANAEQGLLGLVNAPTQALFGRPLIGDGA 120 Query 120 N 120 N Sbjct 121 N 121 >gi|253799501|ref|YP_003032502.1| hypothetical protein TBMG_02531 [Mycobacterium tuberculosis KZN 1435] gi|253321004|gb|ACT25607.1| predicted protein [Mycobacterium tuberculosis KZN 1435] gi|328459249|gb|AEB04672.1| hypothetical protein TBSG_02543 [Mycobacterium tuberculosis KZN 4207] Length=1408 Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 72/122 (60%), Positives = 87/122 (72%), Gaps = 7/122 (5%) Query 1 MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR 60 MS VI PET+AAAA+D+A +GS+I ANAAAA +TTS+LAAGADE+SAAIA LFG+H R Sbjct 2 MSLVIVTPETVAAAASDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 61 Query 61 AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPL-------LNSINAPVLAATGRP 113 YQA S + AAFH RF Q L+ G+Y +AEA PL LN++NAP A GRP Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121 Query 114 LI 115 LI Sbjct 122 LI 123 >gi|183983306|ref|YP_001851597.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183176632|gb|ACC41742.1| PE-PGRS family protein [Mycobacterium marinum M] Length=965 Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 71/123 (58%), Positives = 85/123 (70%), Gaps = 3/123 (2%) Query 1 MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR 60 M+FV+ PE + AAA+DLA++GS I AN A AA T LLAAG DE+S AIA+LF H Sbjct 1 MAFVLVAPEMVTAAASDLANIGSAINTANTAVAAPTAELLAAGTDEVSEAIASLFSGHAL 60 Query 61 AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTP---LLNSINAPVLAATGRPLIGN 117 YQ A AFH +FV ALT GGG Y++AEAAA TP LLN +NAP A GRPLIG+ Sbjct 61 DYQNLGARMTAFHDQFVAALTAGGGLYSSAEAAAATPLQDLLNVVNAPTQALLGRPLIGD 120 Query 118 GAN 120 GA+ Sbjct 121 GAD 123 Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust. Identities = 15/23 (66%), Positives = 20/23 (87%), Gaps = 0/23 (0%) Query 513 QDILSFINEPTEALTGRPLIGNG 535 QD+L+ +N PT+AL GRPLIG+G Sbjct 99 QDLLNVVNAPTQALLGRPLIGDG 121 >gi|183982951|ref|YP_001851242.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183176277|gb|ACC41387.1| PE-PGRS family protein [Mycobacterium marinum M] Length=866 Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 73/121 (61%), Positives = 91/121 (76%), Gaps = 3/121 (2%) Query 6 AVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGRAYQAA 65 AVPE + AAT+L D+GS++ ANA A TT+++AA DE+SAAIAALF HG+ YQ Sbjct 6 AVPEIVVHAATELRDIGSSVNTANAMATTQTTTIVAAAQDEVSAAIAALFSVHGQTYQQL 65 Query 66 SAEAAAFHGRFVQALTTGGGAYAAAEAA---AVTPLLNSINAPVLAATGRPLIGNGANGA 122 SA+A FH +FV+AL++ GGAYAAAEAA + LL +IN+PV A TGRPLIGNGANGA Sbjct 66 SAQAITFHEQFVRALSSAGGAYAAAEAANTGPLQQLLEAINSPVQALTGRPLIGNGANGA 125 Query 123 P 123 P Sbjct 126 P 126 Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust. Identities = 20/30 (67%), Positives = 23/30 (77%), Gaps = 1/30 (3%) Query 511 LQQDILSFINEPTEALTGRPLIGNGDSGTP 540 LQQ +L IN P +ALTGRPLIGNG +G P Sbjct 98 LQQ-LLEAINSPVQALTGRPLIGNGANGAP 126 >gi|183985312|ref|YP_001853603.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183178638|gb|ACC43748.1| PE-PGRS family protein [Mycobacterium marinum M] Length=846 Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 73/130 (57%), Positives = 93/130 (72%), Gaps = 8/130 (6%) Query 1 MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAA-GADEISAAIAALFGAHG 59 MS+V A PE + AAA +++ +GS++ ANA+AAA TT+LL+A GADE+SAA+ A+FG H Sbjct 1 MSYVFASPEVLNAAAAEVSTIGSSLQTANASAAAPTTALLSALGADEVSAAVTAMFGNHA 60 Query 60 RAYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAV-----TP--LLNSINAPVLAATGR 112 +AYQA S +AA FH RFV ALT G AY++AEA+ P LLN +NAP A GR Sbjct 61 QAYQAVSTQAAEFHDRFVAALTAGADAYSSAEASTAATLQSLPQDLLNVVNAPTQALLGR 120 Query 113 PLIGNGANGA 122 LIGNGANGA Sbjct 121 ALIGNGANGA 130 Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust. Identities = 21/43 (49%), Positives = 31/43 (73%), Gaps = 2/43 (4%) Query 495 GADGYNAPESTS--PWHNLQQDILSFINEPTEALTGRPLIGNG 535 GAD Y++ E+++ +L QD+L+ +N PT+AL GR LIGNG Sbjct 84 GADAYSSAEASTAATLQSLPQDLLNVVNAPTQALLGRALIGNG 126 >gi|57116865|ref|YP_177812.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv] gi|7441217|pir||E70917 hypothetical glycine-rich protein Rv1450c - Mycobacterium tuberculosis (strain H37RV) gi|38490271|emb|CAE55390.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv] Length=1329 Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 72/122 (60%), Positives = 86/122 (71%), Gaps = 7/122 (5%) Query 1 MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR 60 MS VI PET+AAAA D+A +GS+I ANAAAA +TTS+LAAGADE+SAAIA LFG+H R Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 61 AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPL-------LNSINAPVLAATGRP 113 YQA S + AAFH RF Q L+ G+Y +AEA PL LN++NAP A GRP Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 114 LI 115 LI Sbjct 121 LI 122 >gi|15840909|ref|NP_335946.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] gi|13881112|gb|AAK45760.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] Length=1408 Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 72/122 (60%), Positives = 86/122 (71%), Gaps = 7/122 (5%) Query 1 MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR 60 MS VI PET+AAAA D+A +GS+I ANAAAA +TTS+LAAGADE+SAAIA LFG+H R Sbjct 2 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 61 Query 61 AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPL-------LNSINAPVLAATGRP 113 YQA S + AAFH RF Q L+ G+Y +AEA PL LN++NAP A GRP Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121 Query 114 LI 115 LI Sbjct 122 LI 123 >gi|148661242|ref|YP_001282765.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] gi|148505394|gb|ABQ73203.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] Length=1398 Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 72/122 (60%), Positives = 86/122 (71%), Gaps = 7/122 (5%) Query 1 MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR 60 MS VI PET+AAAA D+A +GS+I ANAAAA +TTS+LAAGADE+SAAIA LFG+H R Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 61 AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPL-------LNSINAPVLAATGRP 113 YQA S + AAFH RF Q L+ G+Y +AEA PL LN++NAP A GRP Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 114 LI 115 LI Sbjct 121 LI 122 >gi|148822669|ref|YP_001287423.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] gi|148721196|gb|ABR05821.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] gi|344219280|gb|AEM99910.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2] Length=1407 Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 72/122 (60%), Positives = 86/122 (71%), Gaps = 7/122 (5%) Query 1 MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR 60 MS VI PET+AAAA D+A +GS+I ANAAAA +TTS+LAAGADE+SAAIA LFG+H R Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 61 AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPL-------LNSINAPVLAATGRP 113 YQA S + AAFH RF Q L+ G+Y +AEA PL LN++NAP A GRP Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 114 LI 115 LI Sbjct 121 LI 122 >gi|183985012|ref|YP_001853303.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183178338|gb|ACC43448.1| PE-PGRS family protein [Mycobacterium marinum M] Length=1451 Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 74/126 (59%), Positives = 92/126 (74%), Gaps = 3/126 (2%) Query 1 MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR 60 MS++IA PE + +AA DLA + S ++ AN +AA TT +LAAGADE+SAAIAALFGAH + Sbjct 1 MSYLIAAPELMQSAAADLAGIESALSAANVSAAVPTTQILAAGADEVSAAIAALFGAHAQ 60 Query 61 AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTP---LLNSINAPVLAATGRPLIGN 117 AYQA + AFH FVQAL +G +YA AEAA++ P L + +NAP A GRPLIGN Sbjct 61 AYQALGSHVTAFHQEFVQALNSGAASYANAEAASIAPLQALYDLVNAPTQALLGRPLIGN 120 Query 118 GANGAP 123 GANGAP Sbjct 121 GANGAP 126 Score = 38.5 bits (88), Expect = 5.4, Method: Compositional matrix adjust. Identities = 22/31 (71%), Positives = 25/31 (81%), Gaps = 0/31 (0%) Query 99 LNSINAPVLAATGRPLIGNGANGAPGTGANG 129 LN+INAP A TGRPLIGNG GA G+GA+G Sbjct 784 LNAINAPFDALTGRPLIGNGTPGAAGSGADG 814 >gi|253797204|ref|YP_003030205.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435] gi|253318707|gb|ACT23310.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435] gi|328456991|gb|AEB02414.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207] Length=967 Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 106/136 (78%), Positives = 117/136 (87%), Gaps = 0/136 (0%) Query 1 MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR 60 MSFVIA PE IAAAATDLA L S+IA ANAAAAANTT+LLAAGADE+S A+AALFGAHG+ Sbjct 36 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 95 Query 61 AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPLLNSINAPVLAATGRPLIGNGAN 120 AYQA SA+A AFH +F QALT+GGGAYAAAEAAAV+PLL+ IN LA TGRPLIGNG N Sbjct 96 AYQALSAQAQAFHAQFTQALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGTN 155 Query 121 GAPGTGANGGDAGWLI 136 GAPGTGA+G GWLI Sbjct 156 GAPGTGADGAPGGWLI 171 >gi|183982702|ref|YP_001850993.1| PE-PGRS family protein, PE_PGRS9_1 [Mycobacterium marinum M] gi|183176028|gb|ACC41138.1| PE-PGRS family protein, PE_PGRS9_1 [Mycobacterium marinum M] Length=893 Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 73/130 (57%), Positives = 88/130 (68%), Gaps = 7/130 (5%) Query 1 MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR 60 M+FV+AVP+ +A AA DLA +GS I AN AAA +TT ++AA DE+SAAIAALF HG+ Sbjct 1 MAFVLAVPDMVAGAAADLAGVGSVIDAANTAAAGSTTGIVAAAEDEVSAAIAALFSGHGQ 60 Query 61 AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAA----AVTPL---LNSINAPVLAATGRP 113 AYQ SA A FH +F + L G AY+ AEAA PL LN+IN PV TGRP Sbjct 61 AYQQISARVAEFHAQFERVLAAGAQAYSGAEAANASFLQDPLQTALNAINTPVQDLTGRP 120 Query 114 LIGNGANGAP 123 L+GNGANG P Sbjct 121 LVGNGANGVP 130 >gi|328456993|gb|AEB02416.1| PE family protein [Mycobacterium tuberculosis KZN 4207] Length=779 Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 113/138 (82%), Positives = 124/138 (90%), Gaps = 0/138 (0%) Query 1 MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR 60 MSFVIA PE IAAAATDLA LGS+I+ ANAAAAANTT+L+AAGADE+S AIAALFGAHG+ Sbjct 8 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ 67 Query 61 AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPLLNSINAPVLAATGRPLIGNGAN 120 AYQA SA+A AFH +FVQALT+GGGAYAAAEAAAV+PLL+ IN LA TGRPLIGNGAN Sbjct 68 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGAN 127 Query 121 GAPGTGANGGDAGWLIGN 138 GAPGTGANGGD GWLIGN Sbjct 128 GAPGTGANGGDGGWLIGN 145 >gi|31791457|ref|NP_853950.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97] gi|31617042|emb|CAD93150.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97] Length=877 Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 111/136 (82%), Positives = 122/136 (90%), Gaps = 0/136 (0%) Query 1 MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR 60 MSFVIA PE IAAAATDLA LGS+I+ ANAAAAANTT+L+AAGADE+S AIAALFGAHG+ Sbjct 1 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ 60 Query 61 AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPLLNSINAPVLAATGRPLIGNGAN 120 AYQA SA+A AFH +FVQALT+GGGAYAAAEAAAV+PLL+ IN LA TGRPLIGNGAN Sbjct 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGAN 120 Query 121 GAPGTGANGGDAGWLI 136 GAPGTGANGGD GWLI Sbjct 121 GAPGTGANGGDGGWLI 136 Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust. Identities = 17/25 (68%), Positives = 18/25 (72%), Gaps = 0/25 (0%) Query 99 LNSINAPVLAATGRPLIGNGANGAP 123 LN +N P TGRPLIGNGANG P Sbjct 488 LNVVNEPFQTLTGRPLIGNGANGTP 512 >gi|148660044|ref|YP_001281567.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] gi|148504196|gb|ABQ72005.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] Length=957 Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 111/136 (82%), Positives = 122/136 (90%), Gaps = 0/136 (0%) Query 1 MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR 60 MSFVIA PE IAAAATDLA LGS+I+ ANAAAAANTT+L+AAGADE+S AIAALFGAHG+ Sbjct 1 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ 60 Query 61 AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPLLNSINAPVLAATGRPLIGNGAN 120 AYQA SA+A AFH +FVQALT+GGGAYAAAEAAAV+PLL+ IN LA TGRPLIGNGAN Sbjct 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGAN 120 Query 121 GAPGTGANGGDAGWLI 136 GAPGTGANGGD GWLI Sbjct 121 GAPGTGANGGDGGWLI 136 >gi|57116712|ref|YP_177707.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv] gi|7388393|sp|P56877.1|PG03_MYCTU RecName: Full=Uncharacterized PE-PGRS family protein PE_PGRS3; Flags: Precursor gi|41352752|emb|CAE55262.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv] Length=957 Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 111/136 (82%), Positives = 122/136 (90%), Gaps = 0/136 (0%) Query 1 MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR 60 MSFVIA PE IAAAATDLA LGS+I+ ANAAAAANTT+L+AAGADE+S AIAALFGAHG+ Sbjct 1 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ 60 Query 61 AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPLLNSINAPVLAATGRPLIGNGAN 120 AYQA SA+A AFH +FVQALT+GGGAYAAAEAAAV+PLL+ IN LA TGRPLIGNGAN Sbjct 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGAN 120 Query 121 GAPGTGANGGDAGWLI 136 GAPGTGANGGD GWLI Sbjct 121 GAPGTGANGGDGGWLI 136 >gi|253797205|ref|YP_003030206.1| hypothetical protein TBMG_00283 [Mycobacterium tuberculosis KZN 1435] gi|253318708|gb|ACT23311.1| predicted protein [Mycobacterium tuberculosis KZN 1435] Length=919 Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 111/136 (82%), Positives = 122/136 (90%), Gaps = 0/136 (0%) Query 1 MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR 60 MSFVIA PE IAAAATDLA LGS+I+ ANAAAAANTT+L+AAGADE+S AIAALFGAHG+ Sbjct 8 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ 67 Query 61 AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPLLNSINAPVLAATGRPLIGNGAN 120 AYQA SA+A AFH +FVQALT+GGGAYAAAEAAAV+PLL+ IN LA TGRPLIGNGAN Sbjct 68 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGAN 127 Query 121 GAPGTGANGGDAGWLI 136 GAPGTGANGGD GWLI Sbjct 128 GAPGTGANGGDGGWLI 143 Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust. Identities = 17/25 (68%), Positives = 18/25 (72%), Gaps = 0/25 (0%) Query 99 LNSINAPVLAATGRPLIGNGANGAP 123 LN +N P TGRPLIGNGANG P Sbjct 517 LNVVNEPFQTLTGRPLIGNGANGTP 541 >gi|121636193|ref|YP_976416.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224988666|ref|YP_002643353.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|121491840|emb|CAL70303.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224771779|dbj|BAH24585.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|341600209|emb|CCC62879.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=899 Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 111/136 (82%), Positives = 122/136 (90%), Gaps = 0/136 (0%) Query 1 MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR 60 MSFVIA PE IAAAATDLA LGS+I+ ANAAAAANTT+L+AAGADE+S AIAALFGAHG+ Sbjct 1 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ 60 Query 61 AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPLLNSINAPVLAATGRPLIGNGAN 120 AYQA SA+A AFH +FVQALT+GGGAYAAAEAAAV+PLL+ IN LA TGRPLIGNGAN Sbjct 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGAN 120 Query 121 GAPGTGANGGDAGWLI 136 GAPGTGANGGD GWLI Sbjct 121 GAPGTGANGGDGGWLI 136 Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust. Identities = 17/25 (68%), Positives = 18/25 (72%), Gaps = 0/25 (0%) Query 99 LNSINAPVLAATGRPLIGNGANGAP 123 LN +N P TGRPLIGNGANG P Sbjct 510 LNVVNEPFQTLTGRPLIGNGANGTP 534 >gi|148821476|ref|YP_001286230.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] gi|148720003|gb|ABR04628.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] gi|344218099|gb|AEM98729.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2] Length=906 Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 111/136 (82%), Positives = 122/136 (90%), Gaps = 0/136 (0%) Query 1 MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR 60 MSFVIA PE IAAAATDLA LGS+I+ ANAAAAANTT+L+AAGADE+S AIAALFGAHG+ Sbjct 8 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ 67 Query 61 AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPLLNSINAPVLAATGRPLIGNGAN 120 AYQA SA+A AFH +FVQALT+GGGAYAAAEAAAV+PLL+ IN LA TGRPLIGNGAN Sbjct 68 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGAN 127 Query 121 GAPGTGANGGDAGWLI 136 GAPGTGANGGD GWLI Sbjct 128 GAPGTGANGGDGGWLI 143 Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust. Identities = 17/25 (68%), Positives = 18/25 (72%), Gaps = 0/25 (0%) Query 99 LNSINAPVLAATGRPLIGNGANGAP 123 LN +N P TGRPLIGNGANG P Sbjct 517 LNVVNEPFQTLTGRPLIGNGANGTP 541 >gi|224988667|ref|YP_002643354.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|224771780|dbj|BAH24586.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] Length=834 Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 109/138 (79%), Positives = 119/138 (87%), Gaps = 0/138 (0%) Query 1 MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR 60 MSFVIA PE IAAAATDLA L S+IA ANAAAAANTT+LLAAGADE+S A+AALFGAHG+ Sbjct 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60 Query 61 AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPLLNSINAPVLAATGRPLIGNGAN 120 AYQA SA+A AFH +FVQALT+GGGAYAAAEAAA +PLL IN LA TGRPLIGNGAN Sbjct 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGAN 120 Query 121 GAPGTGANGGDAGWLIGN 138 GAPGTGA+G GWLIGN Sbjct 121 GAPGTGADGAPGGWLIGN 138 Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust. Identities = 24/39 (62%), Positives = 25/39 (65%), Gaps = 7/39 (17%) Query 92 AAAVTPL-------LNSINAPVLAATGRPLIGNGANGAP 123 A A TPL LN+IN P A TGRPLIGNGANG P Sbjct 462 APASTPLHTLQQQILNAINEPTQALTGRPLIGNGANGTP 500 Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust. Identities = 38/107 (36%), Positives = 41/107 (39%), Gaps = 56/107 (52%) Query 497 DGYNAPESTSPWHNLQQDILSFINEPTEALTGRPLIGNGDSGTPGTGDDGGAGGWLFGNG 556 DG+NAP ST P H LQQ IL+ INEPT+ALTGRPLIG NG Sbjct 458 DGFNAPAST-PLHTLQQQILNAINEPTQALTGRPLIG---------------------NG 495 Query 557 GNGGAGAAGTNGSAGGAGGAGGILFGTGGAGGAGGVGTAGAGGAGGA 603 NG T G G GGA Sbjct 496 ANG----------------------------------TPGTGADGGA 508 >gi|121636194|ref|YP_976417.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|121491841|emb|CAL70304.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|341600210|emb|CCC62880.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=834 Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 109/138 (79%), Positives = 119/138 (87%), Gaps = 0/138 (0%) Query 1 MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR 60 MSFVIA PE IAAAATDLA L S+IA ANAAAAANTT+LLAAGADE+S A+AALFGAHG+ Sbjct 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60 Query 61 AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPLLNSINAPVLAATGRPLIGNGAN 120 AYQA SA+A AFH +FVQALT+GGGAYAAAEAAA +PLL IN LA TGRPLIGNGAN Sbjct 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGAN 120 Query 121 GAPGTGANGGDAGWLIGN 138 GAPGTGA+G GWLIGN Sbjct 121 GAPGTGADGAPGGWLIGN 138 Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust. Identities = 19/26 (74%), Positives = 21/26 (81%), Gaps = 0/26 (0%) Query 98 LLNSINAPVLAATGRPLIGNGANGAP 123 +LN+IN P A TGRPLIGNGANG P Sbjct 475 ILNAINEPTQALTGRPLIGNGANGTP 500 Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust. Identities = 38/107 (36%), Positives = 41/107 (39%), Gaps = 56/107 (52%) Query 497 DGYNAPESTSPWHNLQQDILSFINEPTEALTGRPLIGNGDSGTPGTGDDGGAGGWLFGNG 556 DG+NAP ST P H LQQ IL+ INEPT+ALTGRPLIG NG Sbjct 458 DGFNAPAST-PLHTLQQQILNAINEPTQALTGRPLIG---------------------NG 495 Query 557 GNGGAGAAGTNGSAGGAGGAGGILFGTGGAGGAGGVGTAGAGGAGGA 603 NG T G G GGA Sbjct 496 ANG----------------------------------TPGTGADGGA 508 >gi|121636192|ref|YP_976415.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224988665|ref|YP_002643352.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|121491839|emb|CAL70302.1| PE-PGRS family protein [first part] [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224771778|dbj|BAH24584.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|341600208|emb|CCC62878.1| PE-PGRS family protein [first part] [Mycobacterium bovis BCG str. Moreau RDJ] Length=916 Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 106/136 (78%), Positives = 116/136 (86%), Gaps = 0/136 (0%) Query 1 MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR 60 MSFVIA PE IAAAATDLA L S+IA ANAAAAANTT+LLAAGADE+S A+AALFGAHG+ Sbjct 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60 Query 61 AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPLLNSINAPVLAATGRPLIGNGAN 120 AYQA SA+A AFH +F QALT+GGGAYAAAEAAA +PLL IN LA TGRPLIGNGAN Sbjct 61 AYQALSAQAQAFHAQFTQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGAN 120 Query 121 GAPGTGANGGDAGWLI 136 GAPGTGA+G GWLI Sbjct 121 GAPGTGADGAPGGWLI 136 >gi|31791458|ref|NP_853951.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97] gi|31617043|emb|CAD93151.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97] Length=831 Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 109/138 (79%), Positives = 119/138 (87%), Gaps = 0/138 (0%) Query 1 MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR 60 MSFVIA PE IAAAATDLA L S+IA ANAAAAANTT+LLAAGADE+S A+AALFGAHG+ Sbjct 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60 Query 61 AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPLLNSINAPVLAATGRPLIGNGAN 120 AYQA SA+A AFH +FVQALT+GGGAYAAAEAAA +PLL IN LA TGRPLIGNGAN Sbjct 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGAN 120 Query 121 GAPGTGANGGDAGWLIGN 138 GAPGTGA+G GWLIGN Sbjct 121 GAPGTGADGAPGGWLIGN 138 Score = 41.6 bits (96), Expect = 0.63, Method: Compositional matrix adjust. Identities = 24/39 (62%), Positives = 25/39 (65%), Gaps = 7/39 (17%) Query 92 AAAVTPL-------LNSINAPVLAATGRPLIGNGANGAP 123 A A TPL LN+IN P A TGRPLIGNGANG P Sbjct 462 APASTPLHTLQQQILNAINEPTQALTGRPLIGNGANGTP 500 Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust. Identities = 38/107 (36%), Positives = 41/107 (39%), Gaps = 56/107 (52%) Query 497 DGYNAPESTSPWHNLQQDILSFINEPTEALTGRPLIGNGDSGTPGTGDDGGAGGWLFGNG 556 DG+NAP ST P H LQQ IL+ INEPT+ALTGRPLIG NG Sbjct 458 DGFNAPAST-PLHTLQQQILNAINEPTQALTGRPLIG---------------------NG 495 Query 557 GNGGAGAAGTNGSAGGAGGAGGILFGTGGAGGAGGVGTAGAGGAGGA 603 NG T G G GGA Sbjct 496 ANG----------------------------------TPGTGADGGA 508 >gi|31791456|ref|NP_853949.1| hypothetical protein Mb0285c [Mycobacterium bovis AF2122/97] gi|31617041|emb|CAD93149.1| PE-PGRS FAMILY PROTEIN [FIRST PART] [Mycobacterium bovis AF2122/97] Length=868 Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 108/138 (79%), Positives = 118/138 (86%), Gaps = 0/138 (0%) Query 1 MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR 60 MSFVIA PE IAAAATDLA L S+IA ANAAAAANTT+LLAAGADE+S A+AALFGAHG+ Sbjct 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60 Query 61 AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPLLNSINAPVLAATGRPLIGNGAN 120 AYQA SA+A AFH +F QALT+GGGAYAAAEAAA +PLL IN LA TGRPLIGNGAN Sbjct 61 AYQALSAQAQAFHAQFTQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGAN 120 Query 121 GAPGTGANGGDAGWLIGN 138 GAPGTGA+G GWLIGN Sbjct 121 GAPGTGADGAPGGWLIGN 138 >gi|183981609|ref|YP_001849900.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183174935|gb|ACC40045.1| PE-PGRS family protein [Mycobacterium marinum M] Length=3634 Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 72/121 (60%), Positives = 90/121 (75%), Gaps = 1/121 (0%) Query 1 MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR 60 MS++ PE +++AA +LA++GST++ ANAAAA TT LLAAG+DE+S IAALFGA+G Sbjct 1 MSYMSISPEIVSSAAGELANIGSTVSAANAAAAVATTELLAAGSDEVSTRIAALFGANGV 60 Query 61 AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTP-LLNSINAPVLAATGRPLIGNGA 119 YQA SA+ A+FH RFV AL TG +Y AEA V LLN++NAPV GRPLIGNGA Sbjct 61 EYQAISAQIASFHDRFVAALNTGTSSYVWAEATNVEQNLLNAVNAPVQTLLGRPLIGNGA 120 Query 120 N 120 N Sbjct 121 N 121 >gi|118618448|ref|YP_906780.1| PE-PGRS family protein [Mycobacterium ulcerans Agy99] gi|118570558|gb|ABL05309.1| PE-PGRS family protein [Mycobacterium ulcerans Agy99] Length=870 Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 70/130 (54%), Positives = 85/130 (66%), Gaps = 7/130 (5%) Query 1 MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR 60 M+FV+AVP+ +A AA DLA +GS I AN AAA +TT ++AA DE+SAAIAALF HG+ Sbjct 1 MAFVLAVPDMVAEAAADLAGVGSVIDAANTAAAGSTTGIVAAAEDEVSAAIAALFSGHGQ 60 Query 61 AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAA----AVTPL---LNSINAPVLAATGRP 113 AYQ S A FH +F + G AY+ AEAA PL LN+ N PV TGRP Sbjct 61 AYQQISTRVAEFHAQFERVFAAGVQAYSGAEAANASFLQDPLQTALNATNKPVQDLTGRP 120 Query 114 LIGNGANGAP 123 L+GNGANG P Sbjct 121 LVGNGANGVP 130 >gi|339293336|gb|AEJ45447.1| PE-PGRS family protein [Mycobacterium tuberculosis CCDC5079] Length=957 Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 110/136 (81%), Positives = 120/136 (89%), Gaps = 0/136 (0%) Query 1 MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR 60 MSFVIA PE IAAAATDLA L S+IA ANAAAAANTT+LLAAGADE+S A+AALFGAHG+ Sbjct 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60 Query 61 AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPLLNSINAPVLAATGRPLIGNGAN 120 AYQA SA+A AFH +F QALT+GGGAYAAAEAAAV+PLL+ IN LA TGRPLIGNGAN Sbjct 61 AYQALSAQAQAFHAQFTQALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGAN 120 Query 121 GAPGTGANGGDAGWLI 136 GAPGTGANGGD GWLI Sbjct 121 GAPGTGANGGDGGWLI 136 >gi|340625315|ref|YP_004743767.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] gi|340003505|emb|CCC42626.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] Length=899 Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 111/136 (82%), Positives = 120/136 (89%), Gaps = 0/136 (0%) Query 1 MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR 60 MSFVIA PE IAAAATDLA LGS+I+ ANAAAAANTT+LLAAGADE+S AIAALFGAHG+ Sbjct 1 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALLAAGADEVSTAIAALFGAHGQ 60 Query 61 AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPLLNSINAPVLAATGRPLIGNGAN 120 AYQA SA+A AFH +FVQALT+GGGAYAAAEAAA +PLL IN LA TGRPLIGNGAN Sbjct 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGAN 120 Query 121 GAPGTGANGGDAGWLI 136 GAPGTGANGGD GWLI Sbjct 121 GAPGTGANGGDGGWLI 136 Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust. Identities = 17/25 (68%), Positives = 18/25 (72%), Gaps = 0/25 (0%) Query 99 LNSINAPVLAATGRPLIGNGANGAP 123 LN +N P TGRPLIGNGANG P Sbjct 510 LNVVNEPFQTLTGRPLIGNGANGTP 534 >gi|341603451|emb|CCC66132.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=1695 Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 75/121 (62%), Positives = 89/121 (74%), Gaps = 1/121 (0%) Query 1 MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR 60 MSFV+ PE ++AAA DLA++GSTI+ AN AAAA TT +LAAGADE+SA IAALFG +G Sbjct 1 MSFVLISPEVVSAAAGDLANVGSTISAANKAAAAATTQVLAAGADEVSARIAALFGMYGL 60 Query 61 AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTP-LLNSINAPVLAATGRPLIGNGA 119 YQA SA+ AA+H +FVQ L TG +Y AEA V LLN INAP GRPLIG+GA Sbjct 61 EYQAISAQVAAYHQQFVQTLRTGAASYMLAEATNVEQNLLNLINAPTQTLLGRPLIGDGA 120 Query 120 N 120 N Sbjct 121 N 121 Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust. Identities = 22/47 (47%), Positives = 32/47 (69%), Gaps = 5/47 (10%) Query 495 GADGYNAPESTSPWHNLQQDILSFINEPTEALTGRPLIGNG-DSGTP 540 GA Y E+T N++Q++L+ IN PT+ L GRPLIG+G ++ TP Sbjct 83 GAASYMLAEAT----NVEQNLLNLINAPTQTLLGRPLIGDGANATTP 125 >gi|224991926|ref|YP_002646615.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|224775041|dbj|BAH27847.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] Length=1695 Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 75/121 (62%), Positives = 89/121 (74%), Gaps = 1/121 (0%) Query 1 MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR 60 MSFV+ PE ++AAA DLA++GSTI+ AN AAAA TT +LAAGADE+SA IAALFG +G Sbjct 1 MSFVLISPEVVSAAAGDLANVGSTISAANKAAAAATTQVLAAGADEVSARIAALFGMYGL 60 Query 61 AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTP-LLNSINAPVLAATGRPLIGNGA 119 YQA SA+ AA+H +FVQ L TG +Y AEA V LLN INAP GRPLIG+GA Sbjct 61 EYQAISAQVAAYHQQFVQTLRTGAASYMLAEATNVEQNLLNLINAPTQTLLGRPLIGDGA 120 Query 120 N 120 N Sbjct 121 N 121 Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust. Identities = 22/47 (47%), Positives = 32/47 (69%), Gaps = 5/47 (10%) Query 495 GADGYNAPESTSPWHNLQQDILSFINEPTEALTGRPLIGNG-DSGTP 540 GA Y E+T N++Q++L+ IN PT+ L GRPLIG+G ++ TP Sbjct 83 GAASYMLAEAT----NVEQNLLNLINAPTQTLLGRPLIGDGANATTP 125 >gi|121639430|ref|YP_979654.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|121495078|emb|CAL73564.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] Length=1810 Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 75/121 (62%), Positives = 89/121 (74%), Gaps = 1/121 (0%) Query 1 MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR 60 MSFV+ PE ++AAA DLA++GSTI+ AN AAAA TT +LAAGADE+SA IAALFG +G Sbjct 1 MSFVLISPEVVSAAAGDLANVGSTISAANKAAAAATTQVLAAGADEVSARIAALFGMYGL 60 Query 61 AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTP-LLNSINAPVLAATGRPLIGNGA 119 YQA SA+ AA+H +FVQ L TG +Y AEA V LLN INAP GRPLIG+GA Sbjct 61 EYQAISAQVAAYHQQFVQTLRTGAASYMLAEATNVEQNLLNLINAPTQTLLGRPLIGDGA 120 Query 120 N 120 N Sbjct 121 N 121 >gi|31794687|ref|NP_857180.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97] gi|31620284|emb|CAD95727.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97] Length=1938 Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 75/121 (62%), Positives = 89/121 (74%), Gaps = 1/121 (0%) Query 1 MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR 60 MSFV+ PE ++AAA DLA++GSTI+ AN AAAA TT +LAAGADE+SA IAALFG +G Sbjct 1 MSFVLISPEVVSAAAGDLANVGSTISAANKAAAAATTQVLAAGADEVSARIAALFGMYGL 60 Query 61 AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTP-LLNSINAPVLAATGRPLIGNGA 119 YQA SA+ AA+H +FVQ L TG +Y AEA V LLN INAP GRPLIG+GA Sbjct 61 EYQAISAQVAAYHQQFVQTLRTGAASYMLAEATNVEQNLLNLINAPTQTLLGRPLIGDGA 120 Query 120 N 120 N Sbjct 121 N 121 Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust. Identities = 17/33 (52%), Positives = 25/33 (76%), Gaps = 4/33 (12%) Query 503 ESTSPWHNLQQDILSFINEPTEALTGRPLIGNG 535 E+T N++Q++L+ IN PT+ L GRPLIG+G Sbjct 91 EAT----NVEQNLLNLINAPTQTLLGRPLIGDG 119 >gi|339633513|ref|YP_004725155.1| PE-PGRS family protein [Mycobacterium africanum GM041182] gi|339332869|emb|CCC28593.1| PE-PGRS family protein [Mycobacterium africanum GM041182] Length=1817 Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 75/121 (62%), Positives = 89/121 (74%), Gaps = 1/121 (0%) Query 1 MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR 60 MSFV+ PE ++AAA DLA++GSTI+ AN AAAA TT +LAAGADE+SA IAALFG +G Sbjct 1 MSFVLISPEVVSAAAGDLANVGSTISAANKAAAAATTQVLAAGADEVSARIAALFGMYGL 60 Query 61 AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTP-LLNSINAPVLAATGRPLIGNGA 119 YQA SA+ AA+H +FVQ L TG +Y AEA V LLN INAP GRPLIG+GA Sbjct 61 EYQAISAQVAAYHQQFVQTLRTGAASYMLAEATNVEQNLLNLINAPTQTLLGRPLIGDGA 120 Query 120 N 120 N Sbjct 121 N 121 Lambda K H 0.308 0.140 0.427 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 2257255669590 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40