BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1766 Length=89 Score E Sequences producing significant alignments: (Bits) Value gi|167966700|ref|ZP_02548977.1| hypothetical protein MtubH3_0096... 171 4e-41 gi|15841235|ref|NP_336272.1| hypothetical protein MT1816 [Mycoba... 170 8e-41 gi|240171244|ref|ZP_04749903.1| hypothetical protein MkanA1_1816... 154 4e-36 gi|118618493|ref|YP_906825.1| hypothetical protein MUL_3117 [Myc... 154 4e-36 gi|120402826|ref|YP_952655.1| hypothetical protein Mvan_1827 [My... 147 4e-34 gi|315446690|ref|YP_004079569.1| hypothetical protein Mspyr1_520... 147 4e-34 gi|111027066|ref|YP_709044.1| hypothetical protein RHA1_ro11239 ... 147 7e-34 gi|145221575|ref|YP_001132253.1| hypothetical protein Mflv_0982 ... 147 7e-34 gi|108802275|ref|YP_642472.1| hypothetical protein Mmcs_5315 [My... 146 1e-33 gi|126438257|ref|YP_001073948.1| hypothetical protein Mjls_5694 ... 145 1e-33 gi|315441659|ref|YP_004074536.1| hypothetical protein Mspyr1_555... 145 3e-33 gi|226359454|ref|YP_002777231.1| hypothetical protein ROP_00390 ... 144 5e-33 gi|108800981|ref|YP_641178.1| hypothetical protein Mmcs_4017 [My... 144 5e-33 gi|119855139|ref|YP_935744.1| hypothetical protein Mkms_5753 [My... 143 1e-32 gi|226304463|ref|YP_002764421.1| hypothetical protein RER_09740 ... 142 2e-32 gi|229494572|ref|ZP_04388335.1| conserved hypothetical protein [... 142 2e-32 gi|226349572|ref|YP_002776686.1| hypothetical protein ROP_pROB01... 141 3e-32 gi|54027875|ref|YP_122115.1| hypothetical protein pnf2650 [Nocar... 140 7e-32 gi|33867183|ref|NP_898741.1| hypothetical protein PBD2.126 [Rhod... 139 1e-31 gi|333990166|ref|YP_004522780.1| hypothetical protein JDM601_152... 139 1e-31 gi|262200832|ref|YP_003272040.1| hypothetical protein Gbro_0834 ... 139 2e-31 gi|169631820|ref|YP_001705469.1| hypothetical protein MAB_4747 [... 137 4e-31 gi|118469552|ref|YP_889629.1| hypothetical protein MSMEG_5388 [M... 137 5e-31 gi|343925800|ref|ZP_08765315.1| hypothetical protein GOALK_050_0... 136 1e-30 gi|312140799|ref|YP_004008135.1| hypothetical protein REQ_34630 ... 135 2e-30 gi|120404980|ref|YP_954809.1| hypothetical protein Mvan_4026 [My... 135 3e-30 gi|302527660|ref|ZP_07280002.1| conserved hypothetical protein [... 133 8e-30 gi|77454784|ref|YP_345652.1| hypothetical protein pREL1_0217 [Rh... 131 4e-29 gi|254385265|ref|ZP_05000596.1| conserved hypothetical protein [... 128 2e-28 gi|311900204|dbj|BAJ32612.1| hypothetical protein KSE_68540 [Kit... 128 4e-28 gi|254380367|ref|ZP_04995733.1| conserved hypothetical protein [... 127 4e-28 gi|333921202|ref|YP_004494783.1| transposase [Amycolicicoccus su... 127 5e-28 gi|311900205|dbj|BAJ32613.1| hypothetical protein KSE_68550 [Kit... 127 8e-28 gi|254380873|ref|ZP_04996239.1| conserved hypothetical protein [... 125 2e-27 gi|343926817|ref|ZP_08766310.1| hypothetical protein GOALK_072_0... 125 3e-27 gi|342859454|ref|ZP_08716108.1| hypothetical protein MCOL_11258 ... 124 5e-27 gi|254384454|ref|ZP_04999795.1| conserved hypothetical protein [... 122 1e-26 gi|317507106|ref|ZP_07964867.1| hypothetical protein HMPREF9336_... 118 2e-25 gi|296167299|ref|ZP_06849701.1| conserved hypothetical protein [... 112 1e-23 gi|296392729|ref|YP_003657613.1| hypothetical protein Srot_0295 ... 112 1e-23 gi|326384004|ref|ZP_08205687.1| hypothetical protein SCNU_13764 ... 112 2e-23 gi|336459929|gb|EGO38841.1| hypothetical protein MAPs_45720 [Myc... 112 2e-23 gi|41409633|ref|NP_962469.1| hypothetical protein MAP3535 [Mycob... 112 2e-23 gi|258650619|ref|YP_003199775.1| hypothetical protein Namu_0356 ... 110 9e-23 gi|258652761|ref|YP_003201917.1| hypothetical protein Namu_2574 ... 108 4e-22 gi|290955604|ref|YP_003486786.1| hypothetical protein SCAB_10411... 108 4e-22 gi|345001313|ref|YP_004804167.1| hypothetical protein SACTE_3782... 107 5e-22 gi|119714408|ref|YP_921373.1| hypothetical protein Noca_0141 [No... 107 5e-22 gi|302559632|ref|ZP_07311974.1| conserved hypothetical protein [... 107 6e-22 gi|297196358|ref|ZP_06913756.1| conserved hypothetical protein [... 107 7e-22 >gi|167966700|ref|ZP_02548977.1| hypothetical protein MtubH3_00968 [Mycobacterium tuberculosis H37Ra] gi|253799193|ref|YP_003032194.1| hypothetical protein TBMG_02229 [Mycobacterium tuberculosis KZN 1435] gi|289447381|ref|ZP_06437125.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A] 8 more sequence titles Length=91 Score = 171 bits (433), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 89/89 (100%), Positives = 89/89 (100%), Gaps = 0/89 (0%) Query 1 VIGDQDSIAAVLNRLRRAQGQLAGVISMIEQGRDCRDVVTQLAAVSRALDRAGFKIVAAG 60 VIGDQDSIAAVLNRLRRAQGQLAGVISMIEQGRDCRDVVTQLAAVSRALDRAGFKIVAAG Sbjct 3 VIGDQDSIAAVLNRLRRAQGQLAGVISMIEQGRDCRDVVTQLAAVSRALDRAGFKIVAAG 62 Query 61 LKECVSGATASGAAPLSAAELEKLFLALA 89 LKECVSGATASGAAPLSAAELEKLFLALA Sbjct 63 LKECVSGATASGAAPLSAAELEKLFLALA 91 >gi|15841235|ref|NP_336272.1| hypothetical protein MT1816 [Mycobacterium tuberculosis CDC1551] gi|31792955|ref|NP_855448.1| hypothetical protein Mb1795A [Mycobacterium bovis AF2122/97] gi|57116907|ref|NP_216282.2| hypothetical protein Rv1766 [Mycobacterium tuberculosis H37Rv] 67 more sequence titles Length=89 Score = 170 bits (430), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 88/89 (99%), Positives = 89/89 (100%), Gaps = 0/89 (0%) Query 1 VIGDQDSIAAVLNRLRRAQGQLAGVISMIEQGRDCRDVVTQLAAVSRALDRAGFKIVAAG 60 +IGDQDSIAAVLNRLRRAQGQLAGVISMIEQGRDCRDVVTQLAAVSRALDRAGFKIVAAG Sbjct 1 MIGDQDSIAAVLNRLRRAQGQLAGVISMIEQGRDCRDVVTQLAAVSRALDRAGFKIVAAG 60 Query 61 LKECVSGATASGAAPLSAAELEKLFLALA 89 LKECVSGATASGAAPLSAAELEKLFLALA Sbjct 61 LKECVSGATASGAAPLSAAELEKLFLALA 89 >gi|240171244|ref|ZP_04749903.1| hypothetical protein MkanA1_18166 [Mycobacterium kansasii ATCC 12478] Length=89 Score = 154 bits (389), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 77/89 (87%), Positives = 84/89 (95%), Gaps = 0/89 (0%) Query 1 VIGDQDSIAAVLNRLRRAQGQLAGVISMIEQGRDCRDVVTQLAAVSRALDRAGFKIVAAG 60 +IGDQDS+AAVLNRLRRAQGQLAGVISMIEQGRDC++VVTQLAAVSRALDRAGFKIVA G Sbjct 1 MIGDQDSMAAVLNRLRRAQGQLAGVISMIEQGRDCKEVVTQLAAVSRALDRAGFKIVATG 60 Query 61 LKECVSGATASGAAPLSAAELEKLFLALA 89 L+EC++GA GAAPLS AELEKLFLALA Sbjct 61 LRECITGAQPDGAAPLSEAELEKLFLALA 89 >gi|118618493|ref|YP_906825.1| hypothetical protein MUL_3117 [Mycobacterium ulcerans Agy99] gi|183982652|ref|YP_001850943.1| hypothetical protein MMAR_2642 [Mycobacterium marinum M] gi|118570603|gb|ABL05354.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99] gi|183175978|gb|ACC41088.1| conserved hypothetical protein [Mycobacterium marinum M] Length=89 Score = 154 bits (389), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 78/89 (88%), Positives = 83/89 (94%), Gaps = 0/89 (0%) Query 1 VIGDQDSIAAVLNRLRRAQGQLAGVISMIEQGRDCRDVVTQLAAVSRALDRAGFKIVAAG 60 +IGDQDS+AAVLNRLRRAQGQLAGVISMIEQGRDC+DVVTQLAAVSRALDRAGFKIVA G Sbjct 1 MIGDQDSMAAVLNRLRRAQGQLAGVISMIEQGRDCKDVVTQLAAVSRALDRAGFKIVATG 60 Query 61 LKECVSGATASGAAPLSAAELEKLFLALA 89 L+EC GATA GA PL+ AELEKLFLALA Sbjct 61 LRECALGATADGAPPLTEAELEKLFLALA 89 >gi|120402826|ref|YP_952655.1| hypothetical protein Mvan_1827 [Mycobacterium vanbaalenii PYR-1] gi|119955644|gb|ABM12649.1| protein of unknown function DUF156 [Mycobacterium vanbaalenii PYR-1] Length=89 Score = 147 bits (372), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 72/89 (81%), Positives = 82/89 (93%), Gaps = 0/89 (0%) Query 1 VIGDQDSIAAVLNRLRRAQGQLAGVISMIEQGRDCRDVVTQLAAVSRALDRAGFKIVAAG 60 ++GD+D+IAAVLNRLRRAQGQLAGVISMIEQGRDC+DVVTQLAAVSRALD+AGFKIVA G Sbjct 1 MVGDEDAIAAVLNRLRRAQGQLAGVISMIEQGRDCKDVVTQLAAVSRALDKAGFKIVATG 60 Query 61 LKECVSGATASGAAPLSAAELEKLFLALA 89 L+EC++G A G P+S AELEKLFLALA Sbjct 61 LRECLTGEAADGQEPMSEAELEKLFLALA 89 >gi|315446690|ref|YP_004079569.1| hypothetical protein Mspyr1_52080 [Mycobacterium sp. Spyr1] gi|315264993|gb|ADU01735.1| uncharacterized conserved protein [Mycobacterium sp. Spyr1] Length=89 Score = 147 bits (372), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 72/89 (81%), Positives = 82/89 (93%), Gaps = 0/89 (0%) Query 1 VIGDQDSIAAVLNRLRRAQGQLAGVISMIEQGRDCRDVVTQLAAVSRALDRAGFKIVAAG 60 ++GD+D+IAAVLNRLRRAQGQLAGVISMIEQGRDC+DVVTQLAAVSRALD+AGFKIVA G Sbjct 1 MVGDEDAIAAVLNRLRRAQGQLAGVISMIEQGRDCKDVVTQLAAVSRALDKAGFKIVATG 60 Query 61 LKECVSGATASGAAPLSAAELEKLFLALA 89 L+EC++G A G P+S AELEKLFLALA Sbjct 61 LRECLTGEAADGQQPMSEAELEKLFLALA 89 >gi|111027066|ref|YP_709044.1| hypothetical protein RHA1_ro11239 [Rhodococcus jostii RHA1] gi|110825605|gb|ABH00886.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=98 Score = 147 bits (370), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 70/89 (79%), Positives = 80/89 (90%), Gaps = 0/89 (0%) Query 1 VIGDQDSIAAVLNRLRRAQGQLAGVISMIEQGRDCRDVVTQLAAVSRALDRAGFKIVAAG 60 ++GD+DSIA VLNRLRRA GQLAGVISMIEQGRDC+DVVTQLAAVSRALD+AGFKIVA G Sbjct 10 MVGDEDSIALVLNRLRRAHGQLAGVISMIEQGRDCKDVVTQLAAVSRALDKAGFKIVATG 69 Query 61 LKECVSGATASGAAPLSAAELEKLFLALA 89 L+EC++G T G P++ AELEKLFLALA Sbjct 70 LRECLTGETEEGKEPMTEAELEKLFLALA 98 >gi|145221575|ref|YP_001132253.1| hypothetical protein Mflv_0982 [Mycobacterium gilvum PYR-GCK] gi|145214061|gb|ABP43465.1| protein of unknown function DUF156 [Mycobacterium gilvum PYR-GCK] Length=89 Score = 147 bits (370), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 71/89 (80%), Positives = 82/89 (93%), Gaps = 0/89 (0%) Query 1 VIGDQDSIAAVLNRLRRAQGQLAGVISMIEQGRDCRDVVTQLAAVSRALDRAGFKIVAAG 60 ++GD+D+IAAVLNRLRRAQGQLAGVISMIEQGRDC+DVVTQLAAVSRALD+AGFKIVA G Sbjct 1 MVGDEDAIAAVLNRLRRAQGQLAGVISMIEQGRDCKDVVTQLAAVSRALDKAGFKIVATG 60 Query 61 LKECVSGATASGAAPLSAAELEKLFLALA 89 L+EC++G A G P++ AELEKLFLALA Sbjct 61 LRECLTGEAADGQQPMTEAELEKLFLALA 89 >gi|108802275|ref|YP_642472.1| hypothetical protein Mmcs_5315 [Mycobacterium sp. MCS] gi|119871428|ref|YP_941380.1| hypothetical protein Mkms_5404 [Mycobacterium sp. KMS] gi|108772694|gb|ABG11416.1| protein of unknown function DUF156 [Mycobacterium sp. MCS] gi|119697517|gb|ABL94590.1| protein of unknown function DUF156 [Mycobacterium sp. KMS] Length=89 Score = 146 bits (368), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 70/89 (79%), Positives = 80/89 (90%), Gaps = 0/89 (0%) Query 1 VIGDQDSIAAVLNRLRRAQGQLAGVISMIEQGRDCRDVVTQLAAVSRALDRAGFKIVAAG 60 ++GD+D+IAAVLNRLRRAQGQL GVISMIEQGRDC+DVVTQLAAVSRALD+AGFKIVA G Sbjct 1 MVGDEDAIAAVLNRLRRAQGQLTGVISMIEQGRDCKDVVTQLAAVSRALDKAGFKIVATG 60 Query 61 LKECVSGATASGAAPLSAAELEKLFLALA 89 ++EC++G A G PLS ELEKLFLALA Sbjct 61 MRECMTGEAADGKEPLSETELEKLFLALA 89 >gi|126438257|ref|YP_001073948.1| hypothetical protein Mjls_5694 [Mycobacterium sp. JLS] gi|126238057|gb|ABO01458.1| protein of unknown function DUF156 [Mycobacterium sp. JLS] Length=89 Score = 145 bits (367), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 70/89 (79%), Positives = 79/89 (89%), Gaps = 0/89 (0%) Query 1 VIGDQDSIAAVLNRLRRAQGQLAGVISMIEQGRDCRDVVTQLAAVSRALDRAGFKIVAAG 60 ++GD+D+IAAVLNRLRRAQGQL GVISMIEQGRDC+DVVTQLAAVSRALD+AGFKIVA G Sbjct 1 MVGDEDAIAAVLNRLRRAQGQLTGVISMIEQGRDCKDVVTQLAAVSRALDKAGFKIVATG 60 Query 61 LKECVSGATASGAAPLSAAELEKLFLALA 89 ++EC +G A G PLS ELEKLFLALA Sbjct 61 MRECTTGEAADGKEPLSETELEKLFLALA 89 >gi|315441659|ref|YP_004074536.1| hypothetical protein Mspyr1_55570 [Mycobacterium sp. Spyr1] gi|315265314|gb|ADU02055.1| uncharacterized conserved protein [Mycobacterium sp. Spyr1] Length=89 Score = 145 bits (365), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 70/89 (79%), Positives = 80/89 (90%), Gaps = 0/89 (0%) Query 1 VIGDQDSIAAVLNRLRRAQGQLAGVISMIEQGRDCRDVVTQLAAVSRALDRAGFKIVAAG 60 ++GDQDSI VLNRLRRA GQLAGVI+MIEQGRDC+DVVTQLAAVSRALD+AGFKIVA G Sbjct 1 MVGDQDSIVVVLNRLRRAHGQLAGVIAMIEQGRDCKDVVTQLAAVSRALDKAGFKIVATG 60 Query 61 LKECVSGATASGAAPLSAAELEKLFLALA 89 L+EC++G GAAP++ AELEKLFLALA Sbjct 61 LRECLAGQVEGGAAPMTEAELEKLFLALA 89 >gi|226359454|ref|YP_002777231.1| hypothetical protein ROP_00390 [Rhodococcus opacus B4] gi|226237938|dbj|BAH48286.1| hypothetical protein [Rhodococcus opacus B4] Length=89 Score = 144 bits (363), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 69/89 (78%), Positives = 79/89 (89%), Gaps = 0/89 (0%) Query 1 VIGDQDSIAAVLNRLRRAQGQLAGVISMIEQGRDCRDVVTQLAAVSRALDRAGFKIVAAG 60 ++GD+DSIA VLNRLRRA GQLAGVISMIEQGRDC+DVVTQLAAVSRALD+AGFKIVA G Sbjct 1 MVGDEDSIALVLNRLRRAHGQLAGVISMIEQGRDCKDVVTQLAAVSRALDKAGFKIVATG 60 Query 61 LKECVSGATASGAAPLSAAELEKLFLALA 89 L+EC++G G P++ AELEKLFLALA Sbjct 61 LRECLTGEAPEGKEPMTEAELEKLFLALA 89 >gi|108800981|ref|YP_641178.1| hypothetical protein Mmcs_4017 [Mycobacterium sp. MCS] gi|119870122|ref|YP_940074.1| hypothetical protein Mkms_4092 [Mycobacterium sp. KMS] gi|126436818|ref|YP_001072509.1| hypothetical protein Mjls_4247 [Mycobacterium sp. JLS] gi|108771400|gb|ABG10122.1| protein of unknown function DUF156 [Mycobacterium sp. MCS] gi|119696211|gb|ABL93284.1| protein of unknown function DUF156 [Mycobacterium sp. KMS] gi|126236618|gb|ABO00019.1| protein of unknown function DUF156 [Mycobacterium sp. JLS] Length=89 Score = 144 bits (362), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 72/89 (81%), Positives = 80/89 (90%), Gaps = 0/89 (0%) Query 1 VIGDQDSIAAVLNRLRRAQGQLAGVISMIEQGRDCRDVVTQLAAVSRALDRAGFKIVAAG 60 ++GDQ++I AVLNRLRRAQGQL GVISMIEQGRDC+DVVTQLAAVSRALDRAGFKIVA G Sbjct 1 MVGDQEAIDAVLNRLRRAQGQLGGVISMIEQGRDCKDVVTQLAAVSRALDRAGFKIVATG 60 Query 61 LKECVSGATASGAAPLSAAELEKLFLALA 89 L+ECV+G A G P+S AELEKLFLALA Sbjct 61 LRECVAGEGADGRDPMSVAELEKLFLALA 89 >gi|119855139|ref|YP_935744.1| hypothetical protein Mkms_5753 [Mycobacterium sp. KMS] gi|119697857|gb|ABL94929.1| protein of unknown function DUF156 [Mycobacterium sp. KMS] Length=104 Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 69/89 (78%), Positives = 80/89 (90%), Gaps = 0/89 (0%) Query 1 VIGDQDSIAAVLNRLRRAQGQLAGVISMIEQGRDCRDVVTQLAAVSRALDRAGFKIVAAG 60 ++GD+DSIAAVLNRLRRAQGQLAGVISMIEQGRDC+ VVTQLAAVSRAL+ AGFKIVA G Sbjct 16 MVGDEDSIAAVLNRLRRAQGQLAGVISMIEQGRDCKAVVTQLAAVSRALEPAGFKIVATG 75 Query 61 LKECVSGATASGAAPLSAAELEKLFLALA 89 L+EC++G + G P++ AELEKLFLALA Sbjct 76 LRECITGDSTEGVEPMTEAELEKLFLALA 104 >gi|226304463|ref|YP_002764421.1| hypothetical protein RER_09740 [Rhodococcus erythropolis PR4] gi|226183578|dbj|BAH31682.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] Length=89 Score = 142 bits (358), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 69/89 (78%), Positives = 80/89 (90%), Gaps = 0/89 (0%) Query 1 VIGDQDSIAAVLNRLRRAQGQLAGVISMIEQGRDCRDVVTQLAAVSRALDRAGFKIVAAG 60 + GD++SIA VLNRLRRA GQLAGVISMIE GRDC+DVVTQLAAVS+ALDRAGFKIVA+G Sbjct 1 MTGDEESIALVLNRLRRAHGQLAGVISMIENGRDCKDVVTQLAAVSKALDRAGFKIVASG 60 Query 61 LKECVSGATASGAAPLSAAELEKLFLALA 89 L+EC+SG +A G P++ AELEKLFLALA Sbjct 61 LRECLSGDSAEGQEPMTEAELEKLFLALA 89 >gi|229494572|ref|ZP_04388335.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] gi|229318934|gb|EEN84792.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] Length=89 Score = 142 bits (357), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 68/89 (77%), Positives = 80/89 (90%), Gaps = 0/89 (0%) Query 1 VIGDQDSIAAVLNRLRRAQGQLAGVISMIEQGRDCRDVVTQLAAVSRALDRAGFKIVAAG 60 + GD++SIA VLNRLRRA GQLAGVISMIE GRDC+DVVTQLAAVS+ALDRAGFKIVA+G Sbjct 1 MTGDEESIALVLNRLRRAHGQLAGVISMIENGRDCKDVVTQLAAVSKALDRAGFKIVASG 60 Query 61 LKECVSGATASGAAPLSAAELEKLFLALA 89 L+EC++G +A G P++ AELEKLFLALA Sbjct 61 LRECLTGESAEGQEPMTEAELEKLFLALA 89 >gi|226349572|ref|YP_002776686.1| hypothetical protein ROP_pROB01-03350 [Rhodococcus opacus B4] gi|226245487|dbj|BAH55834.1| hypothetical protein [Rhodococcus opacus B4] Length=90 Score = 141 bits (355), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 70/90 (78%), Positives = 80/90 (89%), Gaps = 1/90 (1%) Query 1 VIGDQDSIAAVLNRLRRAQGQLAGVISMIEQGRDCRDVVTQLAAVSRALDRAGFKIVAAG 60 ++GD+DSIA VLNRLRRA GQLAGVISMIEQGRDC+DVVTQLAAVSRALD+AGFKIVA G Sbjct 1 MVGDEDSIALVLNRLRRAHGQLAGVISMIEQGRDCKDVVTQLAAVSRALDKAGFKIVATG 60 Query 61 LKECVSGATAS-GAAPLSAAELEKLFLALA 89 L+EC++G A G P++ AELEKLFLALA Sbjct 61 LRECLTGEAAEKGKEPMTEAELEKLFLALA 90 >gi|54027875|ref|YP_122115.1| hypothetical protein pnf2650 [Nocardia farcinica IFM 10152] gi|54019383|dbj|BAD60751.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=89 Score = 140 bits (353), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 67/89 (76%), Positives = 78/89 (88%), Gaps = 0/89 (0%) Query 1 VIGDQDSIAAVLNRLRRAQGQLAGVISMIEQGRDCRDVVTQLAAVSRALDRAGFKIVAAG 60 ++GD++SIA VLNRLRRA GQLAGVI+MIEQGRDC+DVVTQLAAVSRALDRAGFKIVA G Sbjct 1 MVGDENSIAPVLNRLRRAHGQLAGVIAMIEQGRDCKDVVTQLAAVSRALDRAGFKIVATG 60 Query 61 LKECVSGATASGAAPLSAAELEKLFLALA 89 L+EC++G GA P++ ELEKLFL LA Sbjct 61 LRECLAGQPGEGADPMTVEELEKLFLTLA 89 >gi|33867183|ref|NP_898741.1| hypothetical protein PBD2.126 [Rhodococcus erythropolis] gi|77454709|ref|YP_345577.1| hypothetical protein pREL1_0142 [Rhodococcus erythropolis PR4] gi|229493303|ref|ZP_04387094.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] gi|33669017|gb|AAP74011.1| conserved hypothetical protein [Rhodococcus erythropolis] gi|77019709|dbj|BAE46085.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] gi|229319805|gb|EEN85635.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] Length=89 Score = 139 bits (351), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 67/89 (76%), Positives = 77/89 (87%), Gaps = 0/89 (0%) Query 1 VIGDQDSIAAVLNRLRRAQGQLAGVISMIEQGRDCRDVVTQLAAVSRALDRAGFKIVAAG 60 +IGD+DSIA VLNRLRRA GQL+GVI MIE GRDC+DVVTQLAAVSRALD+AGFKIVA G Sbjct 1 MIGDEDSIALVLNRLRRAHGQLSGVIGMIENGRDCKDVVTQLAAVSRALDKAGFKIVATG 60 Query 61 LKECVSGATASGAAPLSAAELEKLFLALA 89 L+EC++G A P++ AELEKLFLALA Sbjct 61 LRECMTGEAADNKEPMTEAELEKLFLALA 89 >gi|333990166|ref|YP_004522780.1| hypothetical protein JDM601_1526 [Mycobacterium sp. JDM601] gi|333486134|gb|AEF35526.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=89 Score = 139 bits (350), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 67/89 (76%), Positives = 80/89 (90%), Gaps = 0/89 (0%) Query 1 VIGDQDSIAAVLNRLRRAQGQLAGVISMIEQGRDCRDVVTQLAAVSRALDRAGFKIVAAG 60 ++GD +S+ AVLNRLRRA GQLAGVI+MIE GRDC++VVTQLAAVSRALDRAGFKIVA+G Sbjct 1 MVGDDESLKAVLNRLRRAHGQLAGVIAMIESGRDCKEVVTQLAAVSRALDRAGFKIVASG 60 Query 61 LKECVSGATASGAAPLSAAELEKLFLALA 89 L+EC++G + SG APL+ ELEKLFLALA Sbjct 61 LRECLTGESDSGKAPLTEEELEKLFLALA 89 >gi|262200832|ref|YP_003272040.1| hypothetical protein Gbro_0834 [Gordonia bronchialis DSM 43247] gi|262084179|gb|ACY20147.1| protein of unknown function DUF156 [Gordonia bronchialis DSM 43247] Length=89 Score = 139 bits (350), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 65/89 (74%), Positives = 80/89 (90%), Gaps = 0/89 (0%) Query 1 VIGDQDSIAAVLNRLRRAQGQLAGVISMIEQGRDCRDVVTQLAAVSRALDRAGFKIVAAG 60 ++GD++SI AV NRLRRA GQLAGVISMI+QGRDC++VVTQLAAVSRALDRAGF+IVA G Sbjct 1 MVGDEESITAVRNRLRRAHGQLAGVISMIDQGRDCKEVVTQLAAVSRALDRAGFQIVATG 60 Query 61 LKECVSGATASGAAPLSAAELEKLFLALA 89 L++C++G TA + P++ AELEKLFLALA Sbjct 61 LRQCLTGETAENSEPMTTAELEKLFLALA 89 >gi|169631820|ref|YP_001705469.1| hypothetical protein MAB_4747 [Mycobacterium abscessus ATCC 19977] gi|169243787|emb|CAM64815.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=89 Score = 137 bits (346), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 66/89 (75%), Positives = 78/89 (88%), Gaps = 0/89 (0%) Query 1 VIGDQDSIAAVLNRLRRAQGQLAGVISMIEQGRDCRDVVTQLAAVSRALDRAGFKIVAAG 60 +I DQDSI+A+L+RLRRAQGQL GVI+MIE GRDC+DVVTQLAAVSRALDRAGFKIVA G Sbjct 1 MIDDQDSISAILSRLRRAQGQLNGVINMIENGRDCKDVVTQLAAVSRALDRAGFKIVATG 60 Query 61 LKECVSGATASGAAPLSAAELEKLFLALA 89 L+EC++ + AP++ AELEKLFLALA Sbjct 61 LRECIAADKSGNTAPMTEAELEKLFLALA 89 >gi|118469552|ref|YP_889629.1| hypothetical protein MSMEG_5388 [Mycobacterium smegmatis str. MC2 155] gi|118170839|gb|ABK71735.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=82 Score = 137 bits (345), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 68/82 (83%), Positives = 75/82 (92%), Gaps = 0/82 (0%) Query 8 IAAVLNRLRRAQGQLAGVISMIEQGRDCRDVVTQLAAVSRALDRAGFKIVAAGLKECVSG 67 +AAVLNRLRRAQGQLAGVI+MIEQGRDC+DVVTQLAAVSRALDRAGFKIVA GL+EC++G Sbjct 1 MAAVLNRLRRAQGQLAGVINMIEQGRDCKDVVTQLAAVSRALDRAGFKIVATGLRECLTG 60 Query 68 ATASGAAPLSAAELEKLFLALA 89 A G P+S AELEKLFLALA Sbjct 61 EAAEGQEPMSEAELEKLFLALA 82 >gi|343925800|ref|ZP_08765315.1| hypothetical protein GOALK_050_00950 [Gordonia alkanivorans NBRC 16433] gi|343764151|dbj|GAA12241.1| hypothetical protein GOALK_050_00950 [Gordonia alkanivorans NBRC 16433] Length=97 Score = 136 bits (342), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 63/89 (71%), Positives = 77/89 (87%), Gaps = 0/89 (0%) Query 1 VIGDQDSIAAVLNRLRRAQGQLAGVISMIEQGRDCRDVVTQLAAVSRALDRAGFKIVAAG 60 ++GD++SI VLNRLRRA GQLAGVISMIEQGRDC+DVVTQLAAVS ALDRAGFKIVA G Sbjct 9 MVGDEESIGVVLNRLRRAHGQLAGVISMIEQGRDCKDVVTQLAAVSSALDRAGFKIVATG 68 Query 61 LKECVSGATASGAAPLSAAELEKLFLALA 89 L+EC++G + + P++ ++EKLFLALA Sbjct 69 LRECITGEQSKDSEPMTIDQMEKLFLALA 97 >gi|312140799|ref|YP_004008135.1| hypothetical protein REQ_34630 [Rhodococcus equi 103S] gi|325675566|ref|ZP_08155250.1| protein of hypothetical function DUF156 [Rhodococcus equi ATCC 33707] gi|311890138|emb|CBH49456.1| conserved hypothetical protein [Rhodococcus equi 103S] gi|325553537|gb|EGD23215.1| protein of hypothetical function DUF156 [Rhodococcus equi ATCC 33707] Length=88 Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 69/89 (78%), Positives = 78/89 (88%), Gaps = 1/89 (1%) Query 1 VIGDQDSIAAVLNRLRRAQGQLAGVISMIEQGRDCRDVVTQLAAVSRALDRAGFKIVAAG 60 + GD++SIA VLNRLRRAQGQLAGVISMIE GR+C+DVVTQLAAVSRALDRAGFKIVA G Sbjct 1 MTGDEESIAQVLNRLRRAQGQLAGVISMIENGRECKDVVTQLAAVSRALDRAGFKIVATG 60 Query 61 LKECVSGATASGAAPLSAAELEKLFLALA 89 L+EC+SG + PL+ AELEKLFLALA Sbjct 61 LRECLSG-DGKASEPLTEAELEKLFLALA 88 >gi|120404980|ref|YP_954809.1| hypothetical protein Mvan_4026 [Mycobacterium vanbaalenii PYR-1] gi|119957798|gb|ABM14803.1| protein of unknown function DUF156 [Mycobacterium vanbaalenii PYR-1] Length=90 Score = 135 bits (339), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 65/90 (73%), Positives = 79/90 (88%), Gaps = 1/90 (1%) Query 1 VIGDQDSIAAVLNRLRRAQGQLAGVISMIEQGRDCRDVVTQLAAVSRALDRAGFKIVAAG 60 + G++D +AVLNRLRRAQGQLAGVI+MIEQGRDC+DVVTQLAAVS+ALD+AGFKIVA G Sbjct 1 MTGEKDPASAVLNRLRRAQGQLAGVITMIEQGRDCKDVVTQLAAVSKALDKAGFKIVATG 60 Query 61 LKECVSGATASG-AAPLSAAELEKLFLALA 89 L+EC +G TA G P++ AELEKLFL+L+ Sbjct 61 LRECATGTTARGDHPPMTEAELEKLFLSLS 90 >gi|302527660|ref|ZP_07280002.1| conserved hypothetical protein [Streptomyces sp. AA4] gi|302436555|gb|EFL08371.1| conserved hypothetical protein [Streptomyces sp. AA4] Length=89 Score = 133 bits (335), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 64/89 (72%), Positives = 76/89 (86%), Gaps = 0/89 (0%) Query 1 VIGDQDSIAAVLNRLRRAQGQLAGVISMIEQGRDCRDVVTQLAAVSRALDRAGFKIVAAG 60 +IGDQD++ V NRLRRAQGQLAGVISMI++GRDC+DVVTQLAAVSRALDRAGFKI+A+G Sbjct 1 MIGDQDTVTQVRNRLRRAQGQLAGVISMIDEGRDCKDVVTQLAAVSRALDRAGFKIIASG 60 Query 61 LKECVSGATASGAAPLSAAELEKLFLALA 89 L+ECVSG A ++ +LEKLFL LA Sbjct 61 LRECVSGGGEGNEAAMTEEQLEKLFLTLA 89 >gi|77454784|ref|YP_345652.1| hypothetical protein pREL1_0217 [Rhodococcus erythropolis PR4] gi|77019784|dbj|BAE46160.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] Length=87 Score = 131 bits (329), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 67/89 (76%), Positives = 76/89 (86%), Gaps = 2/89 (2%) Query 1 VIGDQDSIAAVLNRLRRAQGQLAGVISMIEQGRDCRDVVTQLAAVSRALDRAGFKIVAAG 60 + GD +SIA VLNRLRRAQGQLAGVI+MIE GRDC+DVVTQLAAVS+ALDRAGFKIVA G Sbjct 1 MTGDTESIALVLNRLRRAQGQLAGVIAMIESGRDCKDVVTQLAAVSKALDRAGFKIVATG 60 Query 61 LKECVSGATASGAAPLSAAELEKLFLALA 89 L+EC++GA +S AELEKLFLALA Sbjct 61 LRECITGAET--GEKMSEAELEKLFLALA 87 >gi|254385265|ref|ZP_05000596.1| conserved hypothetical protein [Streptomyces sp. Mg1] gi|194344141|gb|EDX25107.1| conserved hypothetical protein [Streptomyces sp. Mg1] Length=88 Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 62/86 (73%), Positives = 76/86 (89%), Gaps = 1/86 (1%) Query 4 DQDSIAAVLNRLRRAQGQLAGVISMIEQGRDCRDVVTQLAAVSRALDRAGFKIVAAGLKE 63 D DS++AVLNRLRRAQGQL GVI+MIE GRDC+DVVTQLAAVS+ALDRAGFKIVA+G+++ Sbjct 4 DDDSVSAVLNRLRRAQGQLTGVIAMIEAGRDCKDVVTQLAAVSKALDRAGFKIVASGMRQ 63 Query 64 CVSGATASGAAPLSAAELEKLFLALA 89 C++ T + AP++ ELEKLFLALA Sbjct 64 CMTN-TDANQAPMTEEELEKLFLALA 88 >gi|311900204|dbj|BAJ32612.1| hypothetical protein KSE_68540 [Kitasatospora setae KM-6054] Length=88 Score = 128 bits (321), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 66/88 (75%), Positives = 79/88 (90%), Gaps = 2/88 (2%) Query 2 IGDQDSIAAVLNRLRRAQGQLAGVISMIEQGRDCRDVVTQLAAVSRALDRAGFKIVAAGL 61 +GD +++ AVLNRLRRAQGQLAGVI+MIE GRDC+DVVTQLAAVSRALDRAGFKIVA+G+ Sbjct 3 VGD-EAVGAVLNRLRRAQGQLAGVIAMIEAGRDCKDVVTQLAAVSRALDRAGFKIVASGM 61 Query 62 KECVSGATASGAAPLSAAELEKLFLALA 89 ++C++ A G AP+S AELEKLFLALA Sbjct 62 RQCMAEAE-EGGAPMSEAELEKLFLALA 88 >gi|254380367|ref|ZP_04995733.1| conserved hypothetical protein [Streptomyces sp. Mg1] gi|194339278|gb|EDX20244.1| conserved hypothetical protein [Streptomyces sp. Mg1] Length=88 Score = 127 bits (320), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 63/86 (74%), Positives = 76/86 (89%), Gaps = 1/86 (1%) Query 4 DQDSIAAVLNRLRRAQGQLAGVISMIEQGRDCRDVVTQLAAVSRALDRAGFKIVAAGLKE 63 D D++ AVLNRLRRAQGQLAGVI+MIE GRDC+DVVTQLAAVS+ALDRAGFKIVA+G+++ Sbjct 4 DDDAVHAVLNRLRRAQGQLAGVIAMIEAGRDCKDVVTQLAAVSKALDRAGFKIVASGMRQ 63 Query 64 CVSGATASGAAPLSAAELEKLFLALA 89 C++ A A AP++ ELEKLFLALA Sbjct 64 CMTNADAD-QAPMTEEELEKLFLALA 88 >gi|333921202|ref|YP_004494783.1| transposase [Amycolicicoccus subflavus DQS3-9A1] gi|333483423|gb|AEF41983.1| Transposase [Amycolicicoccus subflavus DQS3-9A1] Length=89 Score = 127 bits (320), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 62/85 (73%), Positives = 71/85 (84%), Gaps = 0/85 (0%) Query 5 QDSIAAVLNRLRRAQGQLAGVISMIEQGRDCRDVVTQLAAVSRALDRAGFKIVAAGLKEC 64 Q+ AA+LNRLRRA GQLAGVI M+E+GRDCRDVVTQLAAVSRALDRAGFKIVA L+EC Sbjct 5 QEDAAAILNRLRRAHGQLAGVIRMVEEGRDCRDVVTQLAAVSRALDRAGFKIVATSLREC 64 Query 65 VSGATASGAAPLSAAELEKLFLALA 89 ++ + A PLSA E+EKLFL LA Sbjct 65 LTKSEAGEETPLSADEIEKLFLTLA 89 >gi|311900205|dbj|BAJ32613.1| hypothetical protein KSE_68550 [Kitasatospora setae KM-6054] Length=88 Score = 127 bits (318), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 62/86 (73%), Positives = 77/86 (90%), Gaps = 1/86 (1%) Query 4 DQDSIAAVLNRLRRAQGQLAGVISMIEQGRDCRDVVTQLAAVSRALDRAGFKIVAAGLKE 63 D++++ AVLNRLRRAQGQLAGVI+MIE GRDC+DVVTQLAAVSRALDRAGFKI+A+G+++ Sbjct 4 DEEAVGAVLNRLRRAQGQLAGVIAMIEAGRDCKDVVTQLAAVSRALDRAGFKILASGMRQ 63 Query 64 CVSGATASGAAPLSAAELEKLFLALA 89 C++ A G AP+S AELEK+FL LA Sbjct 64 CLAEAE-EGGAPMSEAELEKMFLTLA 88 >gi|254380873|ref|ZP_04996239.1| conserved hypothetical protein [Streptomyces sp. Mg1] gi|194339784|gb|EDX20750.1| conserved hypothetical protein [Streptomyces sp. Mg1] Length=88 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 61/86 (71%), Positives = 75/86 (88%), Gaps = 1/86 (1%) Query 4 DQDSIAAVLNRLRRAQGQLAGVISMIEQGRDCRDVVTQLAAVSRALDRAGFKIVAAGLKE 63 D D++ +VLNRLRRAQGQLAGVI+MIE GRDC+DVVTQLAAVS+ALDRAGFKIVA+G+++ Sbjct 4 DDDAVKSVLNRLRRAQGQLAGVIAMIEAGRDCKDVVTQLAAVSKALDRAGFKIVASGMRQ 63 Query 64 CVSGATASGAAPLSAAELEKLFLALA 89 C++ A AP++ ELEKLFLALA Sbjct 64 CMANAD-ENQAPMTEEELEKLFLALA 88 >gi|343926817|ref|ZP_08766310.1| hypothetical protein GOALK_072_00390 [Gordonia alkanivorans NBRC 16433] gi|343763177|dbj|GAA13236.1| hypothetical protein GOALK_072_00390 [Gordonia alkanivorans NBRC 16433] Length=96 Score = 125 bits (313), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 66/86 (77%), Positives = 74/86 (87%), Gaps = 1/86 (1%) Query 4 DQDSIAAVLNRLRRAQGQLAGVISMIEQGRDCRDVVTQLAAVSRALDRAGFKIVAAGLKE 63 D +++ AVLNRLRRAQGQLAGVI+MIE GRDC DVVTQLAAVSRALDRAGFKIVA+G+++ Sbjct 12 DDEAMGAVLNRLRRAQGQLAGVIAMIEAGRDCTDVVTQLAAVSRALDRAGFKIVASGMRQ 71 Query 64 CVSGATASGAAPLSAAELEKLFLALA 89 CV A APLS AELEKLFLALA Sbjct 72 CVE-AVDGERAPLSEAELEKLFLALA 96 >gi|342859454|ref|ZP_08716108.1| hypothetical protein MCOL_11258 [Mycobacterium colombiense CECT 3035] gi|342133695|gb|EGT86898.1| hypothetical protein MCOL_11258 [Mycobacterium colombiense CECT 3035] Length=106 Score = 124 bits (310), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 66/88 (75%), Positives = 74/88 (85%), Gaps = 2/88 (2%) Query 4 DQDSIAAVLNRLRRAQGQLAGVISMIEQGRDCRDVVTQLAAVSRALDRAGFKIVAAGLKE 63 DQ I AVL RLRRAQGQL GVISMIEQGR C+DVVTQLAAVSRALDRAGFKI+A+GL++ Sbjct 19 DQGDIDAVLARLRRAQGQLGGVISMIEQGRGCKDVVTQLAAVSRALDRAGFKIIASGLRD 78 Query 64 CVSGAT--ASGAAPLSAAELEKLFLALA 89 C+ A +GAAPLS ELEKLFL+LA Sbjct 79 CILPAENQPAGAAPLSMDELEKLFLSLA 106 >gi|254384454|ref|ZP_04999795.1| conserved hypothetical protein [Streptomyces sp. Mg1] gi|194343340|gb|EDX24306.1| conserved hypothetical protein [Streptomyces sp. Mg1] Length=88 Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 60/86 (70%), Positives = 75/86 (88%), Gaps = 1/86 (1%) Query 4 DQDSIAAVLNRLRRAQGQLAGVISMIEQGRDCRDVVTQLAAVSRALDRAGFKIVAAGLKE 63 ++++ AVLNRLRRAQGQLAGVI+MIE GRDC+DVVTQLAAVSRALDRAGFKIVA+G+++ Sbjct 4 EEEAATAVLNRLRRAQGQLAGVIAMIEAGRDCKDVVTQLAAVSRALDRAGFKIVASGMRQ 63 Query 64 CVSGATASGAAPLSAAELEKLFLALA 89 C++ + GA P++ ELEKLFL LA Sbjct 64 CLA-ESEEGAPPMTEQELEKLFLTLA 88 >gi|317507106|ref|ZP_07964867.1| hypothetical protein HMPREF9336_01238 [Segniliparus rugosus ATCC BAA-974] gi|316254600|gb|EFV13909.1| hypothetical protein HMPREF9336_01238 [Segniliparus rugosus ATCC BAA-974] Length=98 Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 60/87 (69%), Positives = 72/87 (83%), Gaps = 0/87 (0%) Query 3 GDQDSIAAVLNRLRRAQGQLAGVISMIEQGRDCRDVVTQLAAVSRALDRAGFKIVAAGLK 62 G + IAAVL RLRRAQGQL GVI+MIEQGR+CRDVVTQLAAVSRALDRAGFKI+A GL+ Sbjct 12 GAPEDIAAVLGRLRRAQGQLGGVIAMIEQGRNCRDVVTQLAAVSRALDRAGFKIIATGLR 71 Query 63 ECVSGATASGAAPLSAAELEKLFLALA 89 +C++ + + L+ ELEKLFL+LA Sbjct 72 DCIADDSRTTRQGLTVDELEKLFLSLA 98 >gi|296167299|ref|ZP_06849701.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897243|gb|EFG76847.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=105 Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 60/88 (69%), Positives = 70/88 (80%), Gaps = 4/88 (4%) Query 3 GDQDSIAAVLNRLRRAQGQLAGVISMIEQGRDCRDVVTQLAAVSRALDRAGFKIVAAGLK 62 GD D AVL RLRRA GQL GVI+MIEQGR C+DV+TQLAAVSRALDRAGFKI+A+GL+ Sbjct 21 GDMD---AVLARLRRAHGQLGGVIAMIEQGRSCKDVITQLAAVSRALDRAGFKIIASGLR 77 Query 63 ECVSGATASGAAP-LSAAELEKLFLALA 89 EC+ AS P +S ELE+LFL+LA Sbjct 78 ECIRPEDASAQRPAVSIEELERLFLSLA 105 >gi|296392729|ref|YP_003657613.1| hypothetical protein Srot_0295 [Segniliparus rotundus DSM 44985] gi|296179876|gb|ADG96782.1| protein of unknown function DUF156 [Segniliparus rotundus DSM 44985] Length=101 Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 57/84 (68%), Positives = 67/84 (80%), Gaps = 0/84 (0%) Query 6 DSIAAVLNRLRRAQGQLAGVISMIEQGRDCRDVVTQLAAVSRALDRAGFKIVAAGLKECV 65 + +AAVL RLRRA GQL GVI+MIEQ R CRDVVTQLAAVSRALDRAGFKI+A GL++CV Sbjct 18 EDMAAVLGRLRRAHGQLGGVIAMIEQERSCRDVVTQLAAVSRALDRAGFKIIATGLRDCV 77 Query 66 SGATASGAAPLSAAELEKLFLALA 89 + + L+ ELEKLFL+LA Sbjct 78 AEPDGTPGHGLTVDELEKLFLSLA 101 >gi|326384004|ref|ZP_08205687.1| hypothetical protein SCNU_13764 [Gordonia neofelifaecis NRRL B-59395] gi|326197164|gb|EGD54355.1| hypothetical protein SCNU_13764 [Gordonia neofelifaecis NRRL B-59395] Length=86 Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 57/86 (67%), Positives = 64/86 (75%), Gaps = 3/86 (3%) Query 4 DQDSIAAVLNRLRRAQGQLAGVISMIEQGRDCRDVVTQLAAVSRALDRAGFKIVAAGLKE 63 D +S AVLNRLRRAQGQL GVI+MIE GRDC+DVVTQLAAVSRALDRAGFKI+ L+E Sbjct 4 DAESTTAVLNRLRRAQGQLGGVIAMIEDGRDCKDVVTQLAAVSRALDRAGFKIITTNLRE 63 Query 64 CVSGATASGAAPLSAAELEKLFLALA 89 C++ G LEKLFL LA Sbjct 64 CLTAPNDEGP---DLETLEKLFLTLA 86 >gi|336459929|gb|EGO38841.1| hypothetical protein MAPs_45720 [Mycobacterium avium subsp. paratuberculosis S397] Length=102 Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 57/86 (67%), Positives = 67/86 (78%), Gaps = 2/86 (2%) Query 4 DQDSIAAVLNRLRRAQGQLAGVISMIEQGRDCRDVVTQLAAVSRALDRAGFKIVAAGLKE 63 D I VL RLRRA GQL GVI+MIEQGR C+DVVTQLAAVS+ALDRAGFKI+A+GL++ Sbjct 19 DPGDIDVVLTRLRRAHGQLGGVIAMIEQGRSCKDVVTQLAAVSKALDRAGFKIIASGLRD 78 Query 64 CVSGATASGAAPLSAAELEKLFLALA 89 C++ PLS ELEKLFL+LA Sbjct 79 CIT--RTEQQPPLSIDELEKLFLSLA 102 >gi|41409633|ref|NP_962469.1| hypothetical protein MAP3535 [Mycobacterium avium subsp. paratuberculosis K-10] gi|118462622|ref|YP_884295.1| hypothetical protein MAV_5178 [Mycobacterium avium 104] gi|254777524|ref|ZP_05219040.1| hypothetical protein MaviaA2_23036 [Mycobacterium avium subsp. avium ATCC 25291] gi|41398465|gb|AAS06085.1| hypothetical protein MAP_3535 [Mycobacterium avium subsp. paratuberculosis K-10] gi|118163909|gb|ABK64806.1| conserved hypothetical protein [Mycobacterium avium 104] Length=100 Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 57/86 (67%), Positives = 67/86 (78%), Gaps = 2/86 (2%) Query 4 DQDSIAAVLNRLRRAQGQLAGVISMIEQGRDCRDVVTQLAAVSRALDRAGFKIVAAGLKE 63 D I VL RLRRA GQL GVI+MIEQGR C+DVVTQLAAVS+ALDRAGFKI+A+GL++ Sbjct 17 DPGDIDVVLTRLRRAHGQLGGVIAMIEQGRSCKDVVTQLAAVSKALDRAGFKIIASGLRD 76 Query 64 CVSGATASGAAPLSAAELEKLFLALA 89 C++ PLS ELEKLFL+LA Sbjct 77 CIT--RTEQQPPLSIDELEKLFLSLA 100 >gi|258650619|ref|YP_003199775.1| hypothetical protein Namu_0356 [Nakamurella multipartita DSM 44233] gi|258553844|gb|ACV76786.1| protein of unknown function DUF156 [Nakamurella multipartita DSM 44233] Length=88 Score = 110 bits (274), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 54/86 (63%), Positives = 70/86 (82%), Gaps = 2/86 (2%) Query 4 DQDSIAAVLNRLRRAQGQLAGVISMIEQGRDCRDVVTQLAAVSRALDRAGFKIVAAGLKE 63 + +SI AV+NRLRRAQGQ+ GV+ MIE+GRDC+D+VTQLAAVSRA+DRAGF ++AAGLK+ Sbjct 5 EPESITAVVNRLRRAQGQIGGVLRMIEEGRDCQDIVTQLAAVSRAVDRAGFAVIAAGLKQ 64 Query 64 CVSGATASGAAPLSAAELEKLFLALA 89 C+ + GA L +EKLFL+LA Sbjct 65 CL--IESDGADTLDTKTMEKLFLSLA 88 >gi|258652761|ref|YP_003201917.1| hypothetical protein Namu_2574 [Nakamurella multipartita DSM 44233] gi|258555986|gb|ACV78928.1| protein of unknown function DUF156 [Nakamurella multipartita DSM 44233] Length=88 Score = 108 bits (269), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 52/84 (62%), Positives = 68/84 (81%), Gaps = 2/84 (2%) Query 6 DSIAAVLNRLRRAQGQLAGVISMIEQGRDCRDVVTQLAAVSRALDRAGFKIVAAGLKECV 65 +S+ AV+NRLRRAQGQ+ GV+ MIE+GRDC+D+VTQLAAVSRA+DRAGF ++AAGLK+C+ Sbjct 7 ESMTAVINRLRRAQGQIGGVLRMIEEGRDCQDIVTQLAAVSRAVDRAGFAVIAAGLKQCL 66 Query 66 SGATASGAAPLSAAELEKLFLALA 89 + G L +EKLFL+LA Sbjct 67 --VESDGQDTLDTKTMEKLFLSLA 88 >gi|290955604|ref|YP_003486786.1| hypothetical protein SCAB_10411 [Streptomyces scabiei 87.22] gi|260645130|emb|CBG68216.1| conserved hypothetical protein [Streptomyces scabiei 87.22] Length=93 Score = 108 bits (269), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 56/86 (66%), Positives = 66/86 (77%), Gaps = 2/86 (2%) Query 6 DSIAAVLNRLRRAQGQLAGVISMIEQGRDCRDVVTQLAAVSRALDRAGFKIVAAGLKECV 65 + + V+NRLRRAQGQ+AGVI MIE+GRDC DVVTQLAA SRALD+AGF I+A GL+ C+ Sbjct 8 EELKTVVNRLRRAQGQIAGVIKMIEEGRDCEDVVTQLAAASRALDKAGFAIIATGLQHCL 67 Query 66 --SGATASGAAPLSAAELEKLFLALA 89 S TASG A LEKLFL+LA Sbjct 68 TDSDMTASGDREQMRARLEKLFLSLA 93 >gi|345001313|ref|YP_004804167.1| hypothetical protein SACTE_3782 [Streptomyces sp. SirexAA-E] gi|344316939|gb|AEN11627.1| protein of unknown function DUF156 [Streptomyces sp. SirexAA-E] Length=92 Score = 107 bits (268), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 57/86 (67%), Positives = 69/86 (81%), Gaps = 3/86 (3%) Query 6 DSIAAVLNRLRRAQGQLAGVISMIEQGRDCRDVVTQLAAVSRALDRAGFKIVAAGLKECV 65 D + +VLNRLRRAQGQ+AGVI MIE+GRDC DVVTQLAA SRALDRAGF I+A GL++C+ Sbjct 8 DELKSVLNRLRRAQGQIAGVIRMIEEGRDCEDVVTQLAAASRALDRAGFSIIATGLEQCL 67 Query 66 S--GATASGAAPLSAAELEKLFLALA 89 + G TA+ + A LEKLFL+LA Sbjct 68 AEEGGTAADKDRMR-ARLEKLFLSLA 92 >gi|119714408|ref|YP_921373.1| hypothetical protein Noca_0141 [Nocardioides sp. JS614] gi|119535069|gb|ABL79686.1| protein of unknown function DUF156 [Nocardioides sp. JS614] Length=87 Score = 107 bits (267), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 53/86 (62%), Positives = 68/86 (80%), Gaps = 2/86 (2%) Query 4 DQDSIAAVLNRLRRAQGQLAGVISMIEQGRDCRDVVTQLAAVSRALDRAGFKIVAAGLKE 63 D + V+NR++RAQGQLAGV+ M+E+GR+C DVVTQLAAVSRALDRAGF IVA GL++ Sbjct 4 DPQEMTPVINRIKRAQGQLAGVLRMLEEGRECEDVVTQLAAVSRALDRAGFAIVATGLQQ 63 Query 64 CVSGATASGAAPLSAAELEKLFLALA 89 C++ T G L A ++EKLFL+LA Sbjct 64 CLT--TGDGLDSLDAKKMEKLFLSLA 87 >gi|302559632|ref|ZP_07311974.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000] gi|302477250|gb|EFL40343.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000] Length=92 Score = 107 bits (267), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 54/85 (64%), Positives = 66/85 (78%), Gaps = 1/85 (1%) Query 6 DSIAAVLNRLRRAQGQLAGVISMIEQGRDCRDVVTQLAAVSRALDRAGFKIVAAGLKECV 65 + + +VLNRLRRAQGQ+AG+I MIE+GRDC DV+TQLAAVSRALDRAGF I+A GL+ C+ Sbjct 8 EELKSVLNRLRRAQGQIAGIIRMIEEGRDCEDVITQLAAVSRALDRAGFAIIATGLQHCM 67 Query 66 S-GATASGAAPLSAAELEKLFLALA 89 + G G A LEKLFL+LA Sbjct 68 AEGGQVDGDRDRMRARLEKLFLSLA 92 >gi|297196358|ref|ZP_06913756.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC 25486] gi|297153193|gb|EDY64738.2| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC 25486] Length=93 Score = 107 bits (266), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 56/86 (66%), Positives = 65/86 (76%), Gaps = 2/86 (2%) Query 6 DSIAAVLNRLRRAQGQLAGVISMIEQGRDCRDVVTQLAAVSRALDRAGFKIVAAGLKECV 65 D + V+NRLRRAQGQ+AGVI MIE+GRDC DVVTQLAA SRALD+AGF I+A GL+ C+ Sbjct 8 DELKTVVNRLRRAQGQIAGVIKMIEEGRDCEDVVTQLAAASRALDKAGFAIIATGLQHCL 67 Query 66 --SGATASGAAPLSAAELEKLFLALA 89 S ASG A LEKLFL+LA Sbjct 68 TDSDMAASGDREQMRARLEKLFLSLA 93 Lambda K H 0.320 0.133 0.354 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 129638988780 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40