BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1767 Length=119 Score E Sequences producing significant alignments: (Bits) Value gi|15608905|ref|NP_216283.1| hypothetical protein Rv1767 [Mycoba... 238 2e-61 gi|308375675|ref|ZP_07444716.2| hypothetical protein TMGG_00310 ... 238 2e-61 gi|296170321|ref|ZP_06851912.1| alkylhydroperoxidase [Mycobacter... 166 1e-39 gi|120402647|ref|YP_952476.1| alkylhydroperoxidase [Mycobacteriu... 166 1e-39 gi|118618495|ref|YP_906827.1| hypothetical protein MUL_3119 [Myc... 159 1e-37 gi|326333205|ref|ZP_08199452.1| alkylhydroperoxidase [Nocardioid... 154 3e-36 gi|240171246|ref|ZP_04749905.1| hypothetical protein MkanA1_1817... 154 4e-36 gi|119717970|ref|YP_924935.1| alkylhydroperoxidase [Nocardioides... 128 3e-28 gi|284990960|ref|YP_003409514.1| alkylhydroperoxidase-like prote... 122 2e-26 gi|317126632|ref|YP_004100744.1| alkylhydroperoxidase like prote... 121 3e-26 gi|111027062|ref|YP_709040.1| carboxymuconolactone decarboxylase... 119 2e-25 gi|86743146|ref|YP_483546.1| alkylhydroperoxidase [Frankia sp. C... 112 1e-23 gi|256371506|ref|YP_003109330.1| alkylhydroperoxidase-like prote... 112 2e-23 gi|148255117|ref|YP_001239702.1| putative carboxymuconolactone d... 103 1e-20 gi|94311304|ref|YP_584514.1| alkylhydroperoxidase AhpD core [Cup... 101 3e-20 gi|146341502|ref|YP_001206550.1| putative carboxymuconolactone d... 100 8e-20 gi|152995836|ref|YP_001340671.1| alkylhydroperoxidase [Marinomon... 100 9e-20 gi|146340183|ref|YP_001205231.1| putative carboxymuconolactone d... 99.4 1e-19 gi|197284182|ref|YP_002150054.1| hypothetical protein PMI0274 [P... 99.0 2e-19 gi|261344099|ref|ZP_05971743.1| carboxymuconolactone decarboxyla... 98.2 4e-19 gi|226328865|ref|ZP_03804383.1| hypothetical protein PROPEN_0276... 97.1 7e-19 gi|121595716|ref|YP_987612.1| alkylhydroperoxidase [Acidovorax s... 94.7 3e-18 gi|270158985|ref|ZP_06187641.1| 4-carboxymuconolactone decarboxy... 94.0 7e-18 gi|121996884|ref|YP_001001671.1| alkylhydroperoxidase [Halorhodo... 94.0 7e-18 gi|315497687|ref|YP_004086491.1| AhpD family alkylhydroperoxidas... 93.6 8e-18 gi|312113665|ref|YP_004011261.1| alkylhydroperoxidase like prote... 92.8 1e-17 gi|326796170|ref|YP_004313990.1| alkylhydroperoxidase like prote... 92.4 2e-17 gi|319954462|ref|YP_004165729.1| alkylhydroperoxidase like prote... 92.4 2e-17 gi|332141806|ref|YP_004427544.1| Alkylhydroperoxidase [Alteromon... 92.4 2e-17 gi|118589529|ref|ZP_01546934.1| hypothetical protein SIAM614_037... 92.0 2e-17 gi|34495540|ref|NP_899755.1| hypothetical protein CV_0085 [Chrom... 91.3 4e-17 gi|217970186|ref|YP_002355420.1| alkylhydroperoxidase [Thauera s... 91.3 4e-17 gi|126728344|ref|ZP_01744160.1| Putative 4-carboxymuconolactone ... 91.3 4e-17 gi|282890799|ref|ZP_06299319.1| hypothetical protein pah_c026o14... 91.3 5e-17 gi|344924377|ref|ZP_08777838.1| hypothetical protein COdytL_0700... 90.9 5e-17 gi|71066467|ref|YP_265194.1| carboxymuconolactone decarboxylase ... 90.9 6e-17 gi|27380881|ref|NP_772410.1| hypothetical protein bll5770 [Brady... 90.5 7e-17 gi|124265599|ref|YP_001019603.1| hypothetical protein Mpe_A0406 ... 90.5 8e-17 gi|73540885|ref|YP_295405.1| alkylhydroperoxidase AhpD core [Ral... 90.1 9e-17 gi|338175762|ref|YP_004652572.1| protein H16_B0147 [Parachlamydi... 90.1 1e-16 gi|217978710|ref|YP_002362857.1| alkylhydroperoxidase like prote... 90.1 1e-16 gi|212709536|ref|ZP_03317664.1| hypothetical protein PROVALCAL_0... 89.7 1e-16 gi|340619824|ref|YP_004738277.1| carboxymuconolactone decarboxyl... 89.7 1e-16 gi|282857562|ref|ZP_06266788.1| 4-carboxymuconolactone decarboxy... 89.4 2e-16 gi|319788550|ref|YP_004148025.1| alkylhydroperoxidase like prote... 89.4 2e-16 gi|260425271|ref|ZP_05779251.1| 4-carboxymuconolactone decarboxy... 89.0 2e-16 gi|254502081|ref|ZP_05114232.1| carboxymuconolactone decarboxyla... 89.0 2e-16 gi|328545856|ref|YP_004305965.1| carboxymuconolactone decarboxyl... 88.6 3e-16 gi|184154624|ref|YP_001842964.1| hypothetical protein LAF_0148 [... 88.2 4e-16 gi|114765515|ref|ZP_01444623.1| 4-carboxymuconolactone decarboxy... 87.0 9e-16 >gi|15608905|ref|NP_216283.1| hypothetical protein Rv1767 [Mycobacterium tuberculosis H37Rv] gi|15841236|ref|NP_336273.1| hypothetical protein MT1817 [Mycobacterium tuberculosis CDC1551] gi|31792956|ref|NP_855449.1| hypothetical protein Mb1796 [Mycobacterium bovis AF2122/97] 73 more sequence titles Length=119 Score = 238 bits (608), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 119/119 (100%), Positives = 119/119 (100%), Gaps = 0/119 (0%) Query 1 MSDQPRHHQVLDDLLPQHRALRHQIPQVYQRFVALGDAALTDGALSRKVKELVALAIAVV 60 MSDQPRHHQVLDDLLPQHRALRHQIPQVYQRFVALGDAALTDGALSRKVKELVALAIAVV Sbjct 1 MSDQPRHHQVLDDLLPQHRALRHQIPQVYQRFVALGDAALTDGALSRKVKELVALAIAVV 60 Query 61 QGCDGCVASHAQAAVRAGATAQEAAEAIGVTILMHGGPATIHGARAYAAFCEFADTTPS 119 QGCDGCVASHAQAAVRAGATAQEAAEAIGVTILMHGGPATIHGARAYAAFCEFADTTPS Sbjct 61 QGCDGCVASHAQAAVRAGATAQEAAEAIGVTILMHGGPATIHGARAYAAFCEFADTTPS 119 >gi|308375675|ref|ZP_07444716.2| hypothetical protein TMGG_00310 [Mycobacterium tuberculosis SUMu007] gi|308376819|ref|ZP_07440137.2| hypothetical protein TMHG_00941 [Mycobacterium tuberculosis SUMu008] gi|308345565|gb|EFP34416.1| hypothetical protein TMGG_00310 [Mycobacterium tuberculosis SUMu007] gi|308349868|gb|EFP38719.1| hypothetical protein TMHG_00941 [Mycobacterium tuberculosis SUMu008] gi|339294709|gb|AEJ46820.1| hypothetical protein CCDC5079_1630 [Mycobacterium tuberculosis CCDC5079] Length=122 Score = 238 bits (608), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 119/119 (100%), Positives = 119/119 (100%), Gaps = 0/119 (0%) Query 1 MSDQPRHHQVLDDLLPQHRALRHQIPQVYQRFVALGDAALTDGALSRKVKELVALAIAVV 60 MSDQPRHHQVLDDLLPQHRALRHQIPQVYQRFVALGDAALTDGALSRKVKELVALAIAVV Sbjct 4 MSDQPRHHQVLDDLLPQHRALRHQIPQVYQRFVALGDAALTDGALSRKVKELVALAIAVV 63 Query 61 QGCDGCVASHAQAAVRAGATAQEAAEAIGVTILMHGGPATIHGARAYAAFCEFADTTPS 119 QGCDGCVASHAQAAVRAGATAQEAAEAIGVTILMHGGPATIHGARAYAAFCEFADTTPS Sbjct 64 QGCDGCVASHAQAAVRAGATAQEAAEAIGVTILMHGGPATIHGARAYAAFCEFADTTPS 122 >gi|296170321|ref|ZP_06851912.1| alkylhydroperoxidase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895044|gb|EFG74763.1| alkylhydroperoxidase [Mycobacterium parascrofulaceum ATCC BAA-614] Length=126 Score = 166 bits (419), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 78/115 (68%), Positives = 93/115 (81%), Gaps = 0/115 (0%) Query 1 MSDQPRHHQVLDDLLPQHRALRHQIPQVYQRFVALGDAALTDGALSRKVKELVALAIAVV 60 M++ + +VLDDL PQHRALR IP VY+ F + ALT GAL +K KEL+A+AI VV Sbjct 1 MTEHNHYQEVLDDLNPQHRALRKMIPDVYRGFAETSNGALTSGALDKKFKELIAVAIGVV 60 Query 61 QGCDGCVASHAQAAVRAGATAQEAAEAIGVTILMHGGPATIHGARAYAAFCEFAD 115 GCDGC+ASHAQ A RAGA+ +EAAEAIGV+ILMHGGPATI+GARAY+AFCEFAD Sbjct 61 AGCDGCIASHAQGAARAGASKEEAAEAIGVSILMHGGPATIYGARAYSAFCEFAD 115 >gi|120402647|ref|YP_952476.1| alkylhydroperoxidase [Mycobacterium vanbaalenii PYR-1] gi|119955465|gb|ABM12470.1| alkylhydroperoxidase-like protein, AhpD family [Mycobacterium vanbaalenii PYR-1] Length=120 Score = 166 bits (419), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 77/117 (66%), Positives = 96/117 (83%), Gaps = 0/117 (0%) Query 1 MSDQPRHHQVLDDLLPQHRALRHQIPQVYQRFVALGDAALTDGALSRKVKELVALAIAVV 60 M + +H VL +L P+HRALR IP+VYQ F A+ +A+L DGALSRKVKEL+A+ I +V Sbjct 1 MDGEQHYHDVLAELRPEHRALRQMIPEVYQGFNAISEASLADGALSRKVKELIAMTIGIV 60 Query 61 QGCDGCVASHAQAAVRAGATAQEAAEAIGVTILMHGGPATIHGARAYAAFCEFADTT 117 QGCDGC+ASHA+ A RAGAT +EAAEAIGV+I+MHGGPATI+GARA++AF EFA T Sbjct 61 QGCDGCIASHAKGAARAGATQEEAAEAIGVSIMMHGGPATIYGARAFSAFTEFAGKT 117 >gi|118618495|ref|YP_906827.1| hypothetical protein MUL_3119 [Mycobacterium ulcerans Agy99] gi|183982654|ref|YP_001850945.1| hypothetical protein MMAR_2644 [Mycobacterium marinum M] gi|118570605|gb|ABL05356.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99] gi|183175980|gb|ACC41090.1| conserved hypothetical protein [Mycobacterium marinum M] Length=120 Score = 159 bits (402), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 88/115 (77%), Positives = 101/115 (88%), Gaps = 1/115 (0%) Query 1 MSDQPRHHQVLDDLLPQHRALRHQIPQVYQRFVALGDAALTDGALSRKVKELVALAIAVV 60 MSDQ HH+VL++L PQHRALR QIP+VY+ F AL AA DG+LSRKVKEL+A+AI VV Sbjct 1 MSDQ-HHHEVLEELRPQHRALRQQIPEVYKGFAALSGAAFADGSLSRKVKELMAMAIGVV 59 Query 61 QGCDGCVASHAQAAVRAGATAQEAAEAIGVTILMHGGPATIHGARAYAAFCEFAD 115 +GCDGC+ASHAQAA RAGAT +EAAEAIGVTILMHGGPATI+GARAY AFCEFA+ Sbjct 60 EGCDGCIASHAQAAARAGATPEEAAEAIGVTILMHGGPATIYGARAYTAFCEFAE 114 >gi|326333205|ref|ZP_08199452.1| alkylhydroperoxidase [Nocardioidaceae bacterium Broad-1] gi|325948849|gb|EGD40942.1| alkylhydroperoxidase [Nocardioidaceae bacterium Broad-1] Length=134 Score = 154 bits (390), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 75/114 (66%), Positives = 85/114 (75%), Gaps = 0/114 (0%) Query 2 SDQPRHHQVLDDLLPQHRALRHQIPQVYQRFVALGDAALTDGALSRKVKELVALAIAVVQ 61 +D P VL +L P H+ LR IP VY+ + L AA DGAL RK KEL+A AI VV+ Sbjct 12 TDSPHGKSVLRELGPLHQELRRAIPDVYKGWGGLSKAAFADGALDRKTKELIAFAIGVVE 71 Query 62 GCDGCVASHAQAAVRAGATAQEAAEAIGVTILMHGGPATIHGARAYAAFCEFAD 115 GCDGC+ASH QAA RAGA+ QEAAEAIGVT LMHGGPATIHGARA+ AFCEF D Sbjct 72 GCDGCIASHGQAAARAGASPQEAAEAIGVTFLMHGGPATIHGARAFDAFCEFVD 125 >gi|240171246|ref|ZP_04749905.1| hypothetical protein MkanA1_18176 [Mycobacterium kansasii ATCC 12478] Length=117 Score = 154 bits (389), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 92/113 (82%), Positives = 102/113 (91%), Gaps = 0/113 (0%) Query 7 HHQVLDDLLPQHRALRHQIPQVYQRFVALGDAALTDGALSRKVKELVALAIAVVQGCDGC 66 HH++L+DL PQHRALR QIP VY+ F AL AALTDGALSRKVKEL+A+AI VVQGCDGC Sbjct 5 HHEILEDLRPQHRALRSQIPDVYKGFAALSGAALTDGALSRKVKELMAMAIGVVQGCDGC 64 Query 67 VASHAQAAVRAGATAQEAAEAIGVTILMHGGPATIHGARAYAAFCEFADTTPS 119 +ASHAQAA RAGATA+EAAEAIGVTILMHGGPATI+GARAY AFCEFA+T PS Sbjct 65 IASHAQAAARAGATAEEAAEAIGVTILMHGGPATIYGARAYTAFCEFAETKPS 117 >gi|119717970|ref|YP_924935.1| alkylhydroperoxidase [Nocardioides sp. JS614] gi|119538631|gb|ABL83248.1| alkylhydroperoxidase like protein, AhpD family [Nocardioides sp. JS614] Length=137 Score = 128 bits (321), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 75/114 (66%), Positives = 85/114 (75%), Gaps = 0/114 (0%) Query 2 SDQPRHHQVLDDLLPQHRALRHQIPQVYQRFVALGDAALTDGALSRKVKELVALAIAVVQ 61 S+ P +VLD L P HR LR +P VY+ F L AA GAL + KEL+A+AI VV+ Sbjct 15 SEHPHGKEVLDALSPLHRQLRQAVPDVYKGFGELHKAAFAAGALDTRTKELIAVAIGVVE 74 Query 62 GCDGCVASHAQAAVRAGATAQEAAEAIGVTILMHGGPATIHGARAYAAFCEFAD 115 GCDGC+ASHAQAA RAGAT QEAAEAIGVT LM GGPATI+G RAY AFCEFAD Sbjct 75 GCDGCIASHAQAAARAGATKQEAAEAIGVTFLMKGGPATIYGPRAYDAFCEFAD 128 >gi|284990960|ref|YP_003409514.1| alkylhydroperoxidase-like protein [Geodermatophilus obscurus DSM 43160] gi|284064205|gb|ADB75143.1| alkylhydroperoxidase like protein, AhpD family [Geodermatophilus obscurus DSM 43160] Length=122 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 62/108 (58%), Positives = 77/108 (72%), Gaps = 0/108 (0%) Query 8 HQVLDDLLPQHRALRHQIPQVYQRFVALGDAALTDGALSRKVKELVALAIAVVQGCDGCV 67 H V D+L RALR IP+VY + + AA GAL K KEL+ALAIAV + CDGC+ Sbjct 5 HGVQDELREPSRALRRAIPEVYDGYRQMHTAAYAAGALDEKTKELIALAIAVSKQCDGCI 64 Query 68 ASHAQAAVRAGATAQEAAEAIGVTILMHGGPATIHGARAYAAFCEFAD 115 ASHA+ A R GAT E AEA+GVTI M+GGPAT++G RA+AA+ EFA+ Sbjct 65 ASHARGAARTGATEAEVAEALGVTIAMNGGPATVYGPRAFAAYREFAE 112 >gi|317126632|ref|YP_004100744.1| alkylhydroperoxidase like protein, AhpD family [Intrasporangium calvum DSM 43043] gi|315590720|gb|ADU50017.1| alkylhydroperoxidase like protein, AhpD family [Intrasporangium calvum DSM 43043] Length=123 Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 68/114 (60%), Positives = 80/114 (71%), Gaps = 0/114 (0%) Query 2 SDQPRHHQVLDDLLPQHRALRHQIPQVYQRFVALGDAALTDGALSRKVKELVALAIAVVQ 61 ++ P QVL D+ P R+LR IP VY F L AAL GAL K KEL+ALAIAV + Sbjct 9 TNHPHGKQVLQDVAPLSRSLRQAIPDVYAGFSELHKAALAPGALDTKTKELIALAIAVAE 68 Query 62 GCDGCVASHAQAAVRAGATAQEAAEAIGVTILMHGGPATIHGARAYAAFCEFAD 115 CDGC+ASHA+ A RAGA QE AEAIGVTILM GGP T++G RAYAAF +F + Sbjct 69 ECDGCIASHARGAARAGANRQEVAEAIGVTILMTGGPGTVYGPRAYAAFEDFVE 122 >gi|111027062|ref|YP_709040.1| carboxymuconolactone decarboxylase [Rhodococcus jostii RHA1] gi|110825601|gb|ABH00882.1| possible carboxymuconolactone decarboxylase [Rhodococcus jostii RHA1] Length=125 Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 61/95 (65%), Positives = 73/95 (77%), Gaps = 0/95 (0%) Query 19 RALRHQIPQVYQRFVALGDAALTDGALSRKVKELVALAIAVVQGCDGCVASHAQAAVRAG 78 RALR IPQVY + L +AAL GAL K KEL+ALAIAV + CDGC+A+HA+ A G Sbjct 16 RALRQAIPQVYAGYGQLHEAALAPGALDAKTKELIALAIAVSKQCDGCIAAHARGAAEHG 75 Query 79 ATAQEAAEAIGVTILMHGGPATIHGARAYAAFCEF 113 +T QEAAEAIGV ILM+GGPAT++G RA+AAF EF Sbjct 76 STPQEAAEAIGVAILMNGGPATVYGPRAFAAFNEF 110 >gi|86743146|ref|YP_483546.1| alkylhydroperoxidase [Frankia sp. CcI3] gi|86570008|gb|ABD13817.1| alkylhydroperoxidase [Frankia sp. CcI3] Length=149 Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 56/94 (60%), Positives = 69/94 (74%), Gaps = 0/94 (0%) Query 10 VLDDLLPQHRALRHQIPQVYQRFVALGDAALTDGALSRKVKELVALAIAVVQGCDGCVAS 69 V D++ P R LR IP VY+ LGDAAL DGAL + KEL+ALA+AV CDGC+ + Sbjct 7 VQDEIRPHARELRRLIPDVYRGLGTLGDAALRDGALDSRTKELIALALAVSTQCDGCIEA 66 Query 70 HAQAAVRAGATAQEAAEAIGVTILMHGGPATIHG 103 HA AVR GAT QEAAEAIGV +LM+GGPA+++G Sbjct 67 HAHGAVRQGATCQEAAEAIGVALLMNGGPASVYG 100 >gi|256371506|ref|YP_003109330.1| alkylhydroperoxidase-like protein [Acidimicrobium ferrooxidans DSM 10331] gi|256008090|gb|ACU53657.1| alkylhydroperoxidase like protein, AhpD family [Acidimicrobium ferrooxidans DSM 10331] Length=119 Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 55/108 (51%), Positives = 73/108 (68%), Gaps = 0/108 (0%) Query 8 HQVLDDLLPQHRALRHQIPQVYQRFVALGDAALTDGALSRKVKELVALAIAVVQGCDGCV 67 H+V D+L + LR QIP+ + + L AL G + K KEL+ALA+AV CDGC+ Sbjct 6 HEVQDELRDPVKELRAQIPETWHAYATLHRHALEAGHIDAKTKELIALAVAVTTQCDGCI 65 Query 68 ASHAQAAVRAGATAQEAAEAIGVTILMHGGPATIHGARAYAAFCEFAD 115 ASHA+ A R GATA+E AEA+GV +L+ GGP T++G RAY AF EF + Sbjct 66 ASHARGAARQGATAEEVAEALGVVVLLTGGPGTVYGPRAYQAFLEFRE 113 >gi|148255117|ref|YP_001239702.1| putative carboxymuconolactone decarboxylase [Bradyrhizobium sp. BTAi1] gi|146407290|gb|ABQ35796.1| putative carboxymuconolactone decarboxylase [Bradyrhizobium sp. BTAi1] Length=118 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 54/111 (49%), Positives = 68/111 (62%), Gaps = 0/111 (0%) Query 7 HHQVLDDLLPQHRALRHQIPQVYQRFVALGDAALTDGALSRKVKELVALAIAVVQGCDGC 66 + ++ DL + LR IP V Q F AL AA DGAL +K KEL+ALAI V CDGC Sbjct 5 YSEICKDLSGNLKTLRKDIPDVMQGFSALARAAGADGALDKKTKELIALAIGVAVRCDGC 64 Query 67 VASHAQAAVRAGATAQEAAEAIGVTILMHGGPATIHGARAYAAFCEFADTT 117 + HA+A VR GAT QE E +G+ I M GGP+ ++ A A AAF +F T Sbjct 65 IGFHAEALVRLGATRQEVEETLGMAIYMGGGPSLMYAADAIAAFEQFQQQT 115 >gi|94311304|ref|YP_584514.1| alkylhydroperoxidase AhpD core [Cupriavidus metallidurans CH34] gi|254241457|ref|ZP_04934779.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] gi|24461554|gb|AAN62125.1|AF440523_32 conserved hypothetical protein [Pseudomonas aeruginosa] gi|93355156|gb|ABF09245.1| Alkylhydroperoxidase AhpD core [Cupriavidus metallidurans CH34] gi|126194835|gb|EAZ58898.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] Length=125 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 52/108 (49%), Positives = 69/108 (64%), Gaps = 0/108 (0%) Query 7 HHQVLDDLLPQHRALRHQIPQVYQRFVALGDAALTDGALSRKVKELVALAIAVVQGCDGC 66 + Q+ D++ L +PQV + F +G AA+ DGAL K KEL+ALAI V CDGC Sbjct 5 YRQLTQDVVAHLAPLHKGVPQVMKSFGEMGKAAIADGALDAKTKELIALAIGVAARCDGC 64 Query 67 VASHAQAAVRAGATAQEAAEAIGVTILMHGGPATIHGARAYAAFCEFA 114 + HA+A V+ GATA E EA+GV I M GGP+ ++ + A AAF EFA Sbjct 65 IGFHAKALVKLGATAAEVHEALGVAIYMGGGPSAMYASNAVAAFNEFA 112 >gi|146341502|ref|YP_001206550.1| putative carboxymuconolactone decarboxylase [Bradyrhizobium sp. ORS 278] gi|146194308|emb|CAL78330.1| conserved hypothetical protein; putative carboxymuconolactone decarboxylase [Bradyrhizobium sp. ORS 278] Length=117 Score = 100 bits (248), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 50/109 (46%), Positives = 66/109 (61%), Gaps = 0/109 (0%) Query 5 PRHHQVLDDLLPQHRALRHQIPQVYQRFVALGDAALTDGALSRKVKELVALAIAVVQGCD 64 ++++ D+ + LR IP V Q F A+ AA DGAL +K KEL+ALAI V CD Sbjct 3 KNYNEICKDISGNLKTLRKDIPDVMQGFSAMARAAGADGALDKKTKELIALAIGVAVRCD 62 Query 65 GCVASHAQAAVRAGATAQEAAEAIGVTILMHGGPATIHGARAYAAFCEF 113 GC HA+A VR GAT QE E +G+ I M GGP+ ++ A A AF +F Sbjct 63 GCTGFHAEALVRLGATRQEVEETLGMAIYMGGGPSLMYAADAIGAFEQF 111 >gi|152995836|ref|YP_001340671.1| alkylhydroperoxidase [Marinomonas sp. MWYL1] gi|150836760|gb|ABR70736.1| alkylhydroperoxidase like protein, AhpD family [Marinomonas sp. MWYL1] Length=113 Score = 100 bits (248), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 49/107 (46%), Positives = 71/107 (67%), Gaps = 0/107 (0%) Query 7 HHQVLDDLLPQHRALRHQIPQVYQRFVALGDAALTDGALSRKVKELVALAIAVVQGCDGC 66 + ++ D R R P++ F+A+ AA+ +GAL+ KVKE++AL+I + CDGC Sbjct 4 YKEINKDQNAFAREYRKSSPEILDGFMAMHKAAMEEGALAVKVKEMMALSIGIASRCDGC 63 Query 67 VASHAQAAVRAGATAQEAAEAIGVTILMHGGPATIHGARAYAAFCEF 113 +ASHA+AA+RAGAT +E E I V ++M GGPA I+G +A AA EF Sbjct 64 IASHAKAALRAGATREELIETINVALMMGGGPAVIYGTQALAAVDEF 110 >gi|146340183|ref|YP_001205231.1| putative carboxymuconolactone decarboxylase [Bradyrhizobium sp. ORS 278] gi|146192989|emb|CAL76996.1| putative carboxymuconolactone decarboxylase [Bradyrhizobium sp. ORS 278] Length=118 Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 51/107 (48%), Positives = 65/107 (61%), Gaps = 0/107 (0%) Query 7 HHQVLDDLLPQHRALRHQIPQVYQRFVALGDAALTDGALSRKVKELVALAIAVVQGCDGC 66 + + DL + LR IP V Q F AL AA DGAL +K KEL+ALAI V CDGC Sbjct 6 YSDICKDLSGNLKTLRKDIPDVMQGFSALARAAGADGALDKKTKELIALAIGVAVRCDGC 65 Query 67 VASHAQAAVRAGATAQEAAEAIGVTILMHGGPATIHGARAYAAFCEF 113 + HA+A VR GA+ QE E +G+ I M GGP+ ++ A A AF +F Sbjct 66 IGFHAEALVRLGASRQEVEETLGMAIYMGGGPSLMYAADAIGAFEQF 112 >gi|197284182|ref|YP_002150054.1| hypothetical protein PMI0274 [Proteus mirabilis HI4320] gi|227357943|ref|ZP_03842286.1| AhpD family alkylhydroperoxidase like protein [Proteus mirabilis ATCC 29906] gi|194681669|emb|CAR40744.1| conserved hypothetical protein [Proteus mirabilis HI4320] gi|227161852|gb|EEI46881.1| AhpD family alkylhydroperoxidase like protein [Proteus mirabilis ATCC 29906] Length=112 Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 44/109 (41%), Positives = 65/109 (60%), Gaps = 0/109 (0%) Query 6 RHHQVLDDLLPQHRALRHQIPQVYQRFVALGDAALTDGALSRKVKELVALAIAVVQGCDG 65 ++ +++ D+ AL IP+V + F++ A+ DG L K KEL+A+AIAV CDG Sbjct 3 KYQEIVTDISGNMGALSKNIPEVMKSFMSTTKASSKDGVLDAKTKELIAIAIAVANRCDG 62 Query 66 CVASHAQAAVRAGATAQEAAEAIGVTILMHGGPATIHGARAYAAFCEFA 114 C+ H + V G T QE AEA+GV I M GGP+ ++ + AF EF+ Sbjct 63 CIGFHTKTLVELGTTEQELAEALGVAIYMGGGPSVMYASNTMGAFKEFS 111 >gi|261344099|ref|ZP_05971743.1| carboxymuconolactone decarboxylase family protein [Providencia rustigianii DSM 4541] gi|282567689|gb|EFB73224.1| carboxymuconolactone decarboxylase family protein [Providencia rustigianii DSM 4541] Length=113 Score = 98.2 bits (243), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 47/110 (43%), Positives = 61/110 (56%), Gaps = 0/110 (0%) Query 6 RHHQVLDDLLPQHRALRHQIPQVYQRFVALGDAALTDGALSRKVKELVALAIAVVQGCDG 65 + Q+ DLL L IP V +F L A+ DGAL +K KEL+A+ IAV CDG Sbjct 3 KFKQITQDLLLNIDELAKNIPDVINQFSRLQIASTNDGALDKKTKELIAVGIAVANRCDG 62 Query 66 CVASHAQAAVRAGATAQEAAEAIGVTILMHGGPATIHGARAYAAFCEFAD 115 C+ H + V G T QE EA+GV ILM GGP+ ++ A+ EF D Sbjct 63 CIGFHTKTLVDLGVTKQELTEALGVAILMGGGPSVMYATETLRAYNEFID 112 >gi|226328865|ref|ZP_03804383.1| hypothetical protein PROPEN_02766 [Proteus penneri ATCC 35198] gi|225202051|gb|EEG84405.1| hypothetical protein PROPEN_02766 [Proteus penneri ATCC 35198] Length=112 Score = 97.1 bits (240), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 44/109 (41%), Positives = 65/109 (60%), Gaps = 0/109 (0%) Query 6 RHHQVLDDLLPQHRALRHQIPQVYQRFVALGDAALTDGALSRKVKELVALAIAVVQGCDG 65 ++ +++ D+ AL IP+V + F++ A +GAL K KEL+A+AIAV CDG Sbjct 3 KYKEIVTDIASNMGALSQNIPEVMKAFMSTTKAGGKEGALDAKTKELIAIAIAVANRCDG 62 Query 66 CVASHAQAAVRAGATAQEAAEAIGVTILMHGGPATIHGARAYAAFCEFA 114 C+ H + V G T QE AEA+GV I M GGP+ ++ + AF EF+ Sbjct 63 CIGFHTKTLVELGTTEQELAEALGVAIYMGGGPSVMYASNTMGAFKEFS 111 >gi|121595716|ref|YP_987612.1| alkylhydroperoxidase [Acidovorax sp. JS42] gi|222111923|ref|YP_002554187.1| alkylhydroperoxidase-like protein [Acidovorax ebreus TPSY] gi|120607796|gb|ABM43536.1| alkylhydroperoxidase like protein, AhpD family [Acidovorax sp. JS42] gi|221731367|gb|ACM34187.1| alkylhydroperoxidase like protein, AhpD family [Acidovorax ebreus TPSY] Length=123 Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 49/112 (44%), Positives = 64/112 (58%), Gaps = 0/112 (0%) Query 1 MSDQPRHHQVLDDLLPQHRALRHQIPQVYQRFVALGDAALTDGALSRKVKELVALAIAVV 60 M+ + + ++ LR+ +PQV Q F ALG AAL GA+ K KEL+AL I V Sbjct 1 MTSSTDYKALTREISSNVSELRNSVPQVMQGFNALGKAALAGGAIDAKTKELIALGIGVA 60 Query 61 QGCDGCVASHAQAAVRAGATAQEAAEAIGVTILMHGGPATIHGARAYAAFCE 112 CDGC+ H QA R GAT E E +G+ + M GGPA ++ A A AAF E Sbjct 61 ARCDGCIGFHTQALARLGATRAEVHEVLGIAVYMGGGPALMYAANAVAAFDE 112 >gi|270158985|ref|ZP_06187641.1| 4-carboxymuconolactone decarboxylase family protein [Legionella longbeachae D-4968] gi|289166173|ref|YP_003456311.1| hypothetical protein LLO_2846 [Legionella longbeachae NSW150] gi|269987324|gb|EEZ93579.1| 4-carboxymuconolactone decarboxylase family protein [Legionella longbeachae D-4968] gi|288859346|emb|CBJ13282.1| putative conserved hypothetical proteins [Legionella longbeachae NSW150] Length=113 Score = 94.0 bits (232), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 45/114 (40%), Positives = 69/114 (61%), Gaps = 2/114 (1%) Query 1 MSDQPRHHQVLDDLLPQHRALRHQIPQVYQRFVALGDAALTDGALSRKVKELVALAIAVV 60 MSD+ H + D+ Q +R ++P+V F AL AA DG L +K KEL+A+A+AV Sbjct 1 MSDKFTH--ITKDISTQLAKMRKEMPEVMSGFSALAQAATKDGTLDKKTKELIAMALAVA 58 Query 61 QGCDGCVASHAQAAVRAGATAQEAAEAIGVTILMHGGPATIHGARAYAAFCEFA 114 + C GC+ H+Q ++ AT +E E +G+ + M GGP+ ++ A A AF EF+ Sbjct 59 KQCPGCIGFHSQTLIKLQATREELLETLGMAVYMGGGPSLMYAAEALEAFDEFS 112 >gi|121996884|ref|YP_001001671.1| alkylhydroperoxidase [Halorhodospira halophila SL1] gi|121588289|gb|ABM60869.1| alkylhydroperoxidase like protein, AhpD family [Halorhodospira halophila SL1] Length=115 Score = 94.0 bits (232), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 49/103 (48%), Positives = 67/103 (66%), Gaps = 0/103 (0%) Query 12 DDLLPQHRALRHQIPQVYQRFVALGDAALTDGALSRKVKELVALAIAVVQGCDGCVASHA 71 D+L + +R P V + F A+ AA DGALS K KEL+A+AI+V CDGC+A H Sbjct 10 DELSTLFKEVRKGQPDVAKGFSAIAQAATADGALSPKTKELIAVAISVATRCDGCIAFHT 69 Query 72 QAAVRAGATAQEAAEAIGVTILMHGGPATIHGARAYAAFCEFA 114 +AAV+ GAT E E IGV++ M GGP+ +GA+A A+ +FA Sbjct 70 KAAVKHGATRDEILEMIGVSVYMGGGPSLTYGAQALEAYDQFA 112 >gi|315497687|ref|YP_004086491.1| AhpD family alkylhydroperoxidase like protein [Asticcacaulis excentricus CB 48] gi|315415699|gb|ADU12340.1| alkylhydroperoxidase like protein, AhpD family [Asticcacaulis excentricus CB 48] Length=117 Score = 93.6 bits (231), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 45/96 (47%), Positives = 60/96 (63%), Gaps = 0/96 (0%) Query 19 RALRHQIPQVYQRFVALGDAALTDGALSRKVKELVALAIAVVQGCDGCVASHAQAAVRAG 78 + LR IP+ F AL AA DGAL +K+KE +ALAI V CDGC+ H +A VR G Sbjct 17 KTLRKDIPETMAGFSALAKAATADGALDKKMKEFIALAIGVATRCDGCIGYHTEALVRLG 76 Query 79 ATAQEAAEAIGVTILMHGGPATIHGARAYAAFCEFA 114 AT QE E +G+ I M GGP+ ++ A A AF +++ Sbjct 77 ATKQEVEEVLGMAIYMGGGPSLMYAADALMAFEQYS 112 >gi|312113665|ref|YP_004011261.1| alkylhydroperoxidase like protein [Rhodomicrobium vannielii ATCC 17100] gi|311218794|gb|ADP70162.1| alkylhydroperoxidase like protein, AhpD family [Rhodomicrobium vannielii ATCC 17100] Length=117 Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 45/111 (41%), Positives = 67/111 (61%), Gaps = 0/111 (0%) Query 4 QPRHHQVLDDLLPQHRALRHQIPQVYQRFVALGDAALTDGALSRKVKELVALAIAVVQGC 63 + + ++ + + LR IP+ Q F AL AA DG+L +K KEL+ALA+ V C Sbjct 2 EKDYAEITRAISANMKELRKGIPETMQGFSALAAAATKDGSLDKKTKELIALALGVAARC 61 Query 64 DGCVASHAQAAVRAGATAQEAAEAIGVTILMHGGPATIHGARAYAAFCEFA 114 DGC+ H++A VR GAT +E E +G+ I M GGP+ ++ A A A+ +FA Sbjct 62 DGCIGFHSEALVRLGATREEVLEVLGMAIYMGGGPSLMYAADAIGAYDQFA 112 >gi|326796170|ref|YP_004313990.1| alkylhydroperoxidase like protein, AhpD family [Marinomonas mediterranea MMB-1] gi|326546934|gb|ADZ92154.1| alkylhydroperoxidase like protein, AhpD family [Marinomonas mediterranea MMB-1] Length=114 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 43/95 (46%), Positives = 63/95 (67%), Gaps = 0/95 (0%) Query 19 RALRHQIPQVYQRFVALGDAALTDGALSRKVKELVALAIAVVQGCDGCVASHAQAAVRAG 78 R R P + F+ + AA+ DGALS K+KE++A++I + CDGC+ASH +AA+RAG Sbjct 16 RQYRAASPDILNGFMTMHKAAMQDGALSPKIKEMMAVSIGIAARCDGCIASHVKAALRAG 75 Query 79 ATAQEAAEAIGVTILMHGGPATIHGARAYAAFCEF 113 A+ +E E I V ++M GGP+ I+G +A A EF Sbjct 76 ASREELLETINVAVMMGGGPSIIYGTQALGAVDEF 110 >gi|319954462|ref|YP_004165729.1| alkylhydroperoxidase like protein, ahpd family [Cellulophaga algicola DSM 14237] gi|319423122|gb|ADV50231.1| alkylhydroperoxidase like protein, AhpD family [Cellulophaga algicola DSM 14237] Length=117 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 44/108 (41%), Positives = 67/108 (63%), Gaps = 0/108 (0%) Query 7 HHQVLDDLLPQHRALRHQIPQVYQRFVALGDAALTDGALSRKVKELVALAIAVVQGCDGC 66 H + +DL + L +IP+ + F +L A+ +G LS K KEL+AL IA+ CDGC Sbjct 5 HSKQYNDLSRLIKELGTKIPETIEGFNSLHKASTAEGVLSSKTKELIALGIAITVRCDGC 64 Query 67 VASHAQAAVRAGATAQEAAEAIGVTILMHGGPATIHGARAYAAFCEFA 114 +A H + A+++GA ++E E IGV ++M GGPA ++G A A +FA Sbjct 65 IAFHVRDAIKSGALSEEIIETIGVAVMMGGGPALMYGCEALEALNQFA 112 >gi|332141806|ref|YP_004427544.1| Alkylhydroperoxidase [Alteromonas macleodii str. 'Deep ecotype'] gi|327551828|gb|AEA98546.1| Alkylhydroperoxidase [Alteromonas macleodii str. 'Deep ecotype'] Length=115 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 44/110 (40%), Positives = 68/110 (62%), Gaps = 0/110 (0%) Query 7 HHQVLDDLLPQHRALRHQIPQVYQRFVALGDAALTDGALSRKVKELVALAIAVVQGCDGC 66 + ++ + L P ++ +P+V + F A+ AA DGAL +K KEL+ALAI + CDGC Sbjct 5 YKEITEGLNPYLAEVKKGVPEVMKGFSAMAKAATADGALDKKTKELLALAIGIATRCDGC 64 Query 67 VASHAQAAVRAGATAQEAAEAIGVTILMHGGPATIHGARAYAAFCEFADT 116 + HA+A V GAT E E G+++ M GGP+ ++ A A AF EF+++ Sbjct 65 IGFHAKALVHLGATRAEIEEVCGMSVYMGGGPSFMYAADALRAFDEFSES 114 >gi|118589529|ref|ZP_01546934.1| hypothetical protein SIAM614_03795 [Stappia aggregata IAM 12614] gi|118437615|gb|EAV44251.1| hypothetical protein SIAM614_03795 [Stappia aggregata IAM 12614] Length=116 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 49/96 (52%), Positives = 61/96 (64%), Gaps = 0/96 (0%) Query 20 ALRHQIPQVYQRFVALGDAALTDGALSRKVKELVALAIAVVQGCDGCVASHAQAAVRAGA 79 A+R IP+V + F +L AA GAL K KEL+ALAI + CDGC+A HA+AA R GA Sbjct 19 AVRKGIPEVAKGFGSLAKAATAPGALDAKTKELIALAIGITARCDGCLAYHARAAARLGA 78 Query 80 TAQEAAEAIGVTILMHGGPATIHGARAYAAFCEFAD 115 E E IGV++ M GGP+ I+GA A AAF D Sbjct 79 NRDEILEVIGVSVYMGGGPSMIYGAEALAAFDGLKD 114 >gi|34495540|ref|NP_899755.1| hypothetical protein CV_0085 [Chromobacterium violaceum ATCC 12472] gi|34101395|gb|AAQ57764.1| conserved hypothetical protein [Chromobacterium violaceum ATCC 12472] Length=118 Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 47/117 (41%), Positives = 70/117 (60%), Gaps = 0/117 (0%) Query 1 MSDQPRHHQVLDDLLPQHRALRHQIPQVYQRFVALGDAALTDGALSRKVKELVALAIAVV 60 MS++ + ++ + LR +P+V Q F + AA DGAL +K KEL+ALA+ V Sbjct 1 MSNEVNYPELTHAISKHLATLRADVPEVMQGFNDMARAATRDGALDKKTKELIALALGVA 60 Query 61 QGCDGCVASHAQAAVRAGATAQEAAEAIGVTILMHGGPATIHGARAYAAFCEFADTT 117 CDGC+ HAQA V+ GA+ E EA+ + + M GGP+ ++ A A AAF +F+ T Sbjct 61 ARCDGCLGFHAQALVKLGASKTEVEEALAMAVYMGGGPSLMYSAHALAAFEQFSAKT 117 >gi|217970186|ref|YP_002355420.1| alkylhydroperoxidase [Thauera sp. MZ1T] gi|217507513|gb|ACK54524.1| alkylhydroperoxidase like protein, AhpD family [Thauera sp. MZ1T] Length=117 Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 46/107 (43%), Positives = 64/107 (60%), Gaps = 0/107 (0%) Query 7 HHQVLDDLLPQHRALRHQIPQVYQRFVALGDAALTDGALSRKVKELVALAIAVVQGCDGC 66 H Q++ D+ LR +IP+ Q F A+ ++L DG LS KEL+ALAIAV Q CD C Sbjct 6 HVQIVSDVSKALATLRKEIPETMQGFGAMAKSSLQDGVLSELQKELIALAIAVTQRCDAC 65 Query 67 VASHAQAAVRAGATAQEAAEAIGVTILMHGGPATIHGARAYAAFCEF 113 + H +A +R GAT ++ E +GV M GGPA ++ A A A+ E Sbjct 66 IGFHIKALIRLGATREQIMETLGVCTYMGGGPALMYAAEAVRAYEEM 112 >gi|126728344|ref|ZP_01744160.1| Putative 4-carboxymuconolactone decarboxylase [Sagittula stellata E-37] gi|126711309|gb|EBA10359.1| Putative 4-carboxymuconolactone decarboxylase [Sagittula stellata E-37] Length=112 Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 50/114 (44%), Positives = 67/114 (59%), Gaps = 4/114 (3%) Query 1 MSDQPRHHQVLDDLLPQHRALRHQIPQVYQRFVALGDAALTDGALSRKVKELVALAIAVV 60 MS + + ++L R LR IP + FV + AA DGALS K KEL+AL IAV Sbjct 1 MSFTEKSAETRNNL----RTLRRSIPDTFAGFVQMEQAASRDGALSHKEKELIALGIAVA 56 Query 61 QGCDGCVASHAQAAVRAGATAQEAAEAIGVTILMHGGPATIHGARAYAAFCEFA 114 C+ C+ SHA A +RAG + +E AEA+G I M GGP ++ +A AAF E + Sbjct 57 LRCEDCIISHAGACLRAGCSREEVAEALGTAIQMSGGPGLMYAGKAMAAFDELS 110 >gi|282890799|ref|ZP_06299319.1| hypothetical protein pah_c026o143 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281499392|gb|EFB41691.1| hypothetical protein pah_c026o143 [Parachlamydia acanthamoebae str. Hall's coccus] Length=114 Score = 91.3 bits (225), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 42/110 (39%), Positives = 63/110 (58%), Gaps = 0/110 (0%) Query 5 PRHHQVLDDLLPQHRALRHQIPQVYQRFVALGDAALTDGALSRKVKELVALAIAVVQGCD 64 + ++ D+ +R +IP V F L AA DGAL++K KEL+ALA+ + CD Sbjct 3 KNYKEITADISMYLSKMRKEIPDVMNGFSHLAQAATKDGALNKKTKELIALALGIAARCD 62 Query 65 GCVASHAQAAVRAGATAQEAAEAIGVTILMHGGPATIHGARAYAAFCEFA 114 GC+ H Q+ VR G T +E E + + + M GGP+ ++ A A AF EF+ Sbjct 63 GCIGFHTQSLVRLGVTREEFLETLSMAVYMGGGPSLMYAAEALKAFEEFS 112 >gi|344924377|ref|ZP_08777838.1| hypothetical protein COdytL_07002 [Candidatus Odyssella thessalonicensis L13] Length=142 Score = 90.9 bits (224), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 45/95 (48%), Positives = 59/95 (63%), Gaps = 0/95 (0%) Query 19 RALRHQIPQVYQRFVALGDAALTDGALSRKVKELVALAIAVVQGCDGCVASHAQAAVRAG 78 + LR I Q F AL AA DG L +K KEL+ALA+ V CDGC+ HA+A V+ G Sbjct 40 KTLRQDITDTLQGFSALAQAATKDGVLDKKTKELIALALGVAARCDGCLGFHAEALVKLG 99 Query 79 ATAQEAAEAIGVTILMHGGPATIHGARAYAAFCEF 113 AT E E +G+T+ M GGP+ ++ A A AAF +F Sbjct 100 ATKAEVEEMLGMTVYMGGGPSLMYAADALAAFEQF 134 >gi|71066467|ref|YP_265194.1| carboxymuconolactone decarboxylase family protein [Psychrobacter arcticus 273-4] gi|71039452|gb|AAZ19760.1| possible carboxymuconolactone decarboxylase family protein [Psychrobacter arcticus 273-4] Length=115 Score = 90.9 bits (224), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 44/94 (47%), Positives = 59/94 (63%), Gaps = 0/94 (0%) Query 21 LRHQIPQVYQRFVALGDAALTDGALSRKVKELVALAIAVVQGCDGCVASHAQAAVRAGAT 80 L IP+ + F LG AA DG L +K KEL+ALA+AV CD C+ H + V+ GAT Sbjct 19 LHKHIPETTKAFSQLGAAATADGVLDKKTKELIALALAVGARCDACIGFHTKTLVKLGAT 78 Query 81 AQEAAEAIGVTILMHGGPATIHGARAYAAFCEFA 114 QE AE +G+ + M GGP+ ++ A A AAF EF+ Sbjct 79 EQEVAETLGLCVYMGGGPSMMYAAEAIAAFNEFS 112 >gi|27380881|ref|NP_772410.1| hypothetical protein bll5770 [Bradyrhizobium japonicum USDA 110] gi|27354047|dbj|BAC51035.1| bll5770 [Bradyrhizobium japonicum USDA 110] Length=118 Score = 90.5 bits (223), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 44/95 (47%), Positives = 60/95 (64%), Gaps = 0/95 (0%) Query 19 RALRHQIPQVYQRFVALGDAALTDGALSRKVKELVALAIAVVQGCDGCVASHAQAAVRAG 78 R LR IP + F AL AA DGAL +K KEL+ALA+ V CDGC+ H +A V+ G Sbjct 17 RKLRSDIPDTMKGFAALAQAATRDGALDKKTKELMALALGVAAHCDGCIGFHTEALVKLG 76 Query 79 ATAQEAAEAIGVTILMHGGPATIHGARAYAAFCEF 113 AT +E E +G+ + M GGP+ ++ A A AA+ +F Sbjct 77 ATREEIEETLGMAVYMGGGPSLMYAADAIAAYEQF 111 >gi|124265599|ref|YP_001019603.1| hypothetical protein Mpe_A0406 [Methylibium petroleiphilum PM1] gi|124258374|gb|ABM93368.1| conserved hypothetical protein [Methylibium petroleiphilum PM1] Length=125 Score = 90.5 bits (223), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 46/108 (43%), Positives = 68/108 (63%), Gaps = 0/108 (0%) Query 7 HHQVLDDLLPQHRALRHQIPQVYQRFVALGDAALTDGALSRKVKELVALAIAVVQGCDGC 66 + ++ D+ + LR +P V + F LG AA+ DGAL +K KEL+A+A++V CD C Sbjct 13 YRELTLDISARLATLRTGVPDVMKGFGELGRAAMADGALDKKTKELIAVALSVAARCDPC 72 Query 67 VASHAQAAVRAGATAQEAAEAIGVTILMHGGPATIHGARAYAAFCEFA 114 + H QA + GA+ QE EA+GV + M GGP+ ++ A A AA+ EFA Sbjct 73 IGFHMQALAKLGASRQELDEALGVAVYMGGGPSLMYAAHAVAAYDEFA 120 >gi|73540885|ref|YP_295405.1| alkylhydroperoxidase AhpD core [Ralstonia eutropha JMP134] gi|72118298|gb|AAZ60561.1| Alkylhydroperoxidase AhpD core [Ralstonia eutropha JMP134] Length=115 Score = 90.1 bits (222), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 45/114 (40%), Positives = 62/114 (55%), Gaps = 0/114 (0%) Query 1 MSDQPRHHQVLDDLLPQHRALRHQIPQVYQRFVALGDAALTDGALSRKVKELVALAIAVV 60 MS P V+ D+ Q R LR P + F L A +GALS+K +E++AL IAV Sbjct 1 MSGMPEFKTVVKDVSAQMRRLRETQPDLMAAFSQLAAAGTKEGALSKKTREMIALGIAVA 60 Query 61 QGCDGCVASHAQAAVRAGATAQEAAEAIGVTILMHGGPATIHGARAYAAFCEFA 114 CD C+ H QA ++ G T E E +G + M GGP+ ++ A AAF EF+ Sbjct 61 GRCDDCIGFHIQALIKLGTTRTELEEVLGTAVYMGGGPSMMYATHALAAFDEFS 114 >gi|338175762|ref|YP_004652572.1| protein H16_B0147 [Parachlamydia acanthamoebae UV7] gi|336480120|emb|CCB86718.1| uncharacterized protein H16_B0147 [Parachlamydia acanthamoebae UV7] Length=114 Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 41/110 (38%), Positives = 63/110 (58%), Gaps = 0/110 (0%) Query 5 PRHHQVLDDLLPQHRALRHQIPQVYQRFVALGDAALTDGALSRKVKELVALAIAVVQGCD 64 + ++ D+ +R +IP V F L AA DGAL++K KEL+ALA+ + CD Sbjct 3 KNYKEITADISMYLSKMRKEIPDVMNGFSHLAQAATKDGALNKKTKELIALALGIAARCD 62 Query 65 GCVASHAQAAVRAGATAQEAAEAIGVTILMHGGPATIHGARAYAAFCEFA 114 GC+ H Q+ V+ G T +E E + + + M GGP+ ++ A A AF EF+ Sbjct 63 GCIGFHTQSLVKLGVTREEFLETLSMAVYMGGGPSLMYAAEALKAFEEFS 112 >gi|217978710|ref|YP_002362857.1| alkylhydroperoxidase like protein [Methylocella silvestris BL2] gi|217504086|gb|ACK51495.1| alkylhydroperoxidase like protein, AhpD family [Methylocella silvestris BL2] Length=118 Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 48/115 (42%), Positives = 68/115 (60%), Gaps = 1/115 (0%) Query 1 MSDQPRHHQVLDDLLPQHRA-LRHQIPQVYQRFVALGDAALTDGALSRKVKELVALAIAV 59 MS +++ L + ++ A LR +P V + F L +A DGAL +K KEL+ALA+ V Sbjct 1 MSLSAENYRALTRGVSKNLATLRADLPAVMKGFSDLARSATEDGALDKKTKELIALALGV 60 Query 60 VQGCDGCVASHAQAAVRAGATAQEAAEAIGVTILMHGGPATIHGARAYAAFCEFA 114 CD C+ HAQ V+ GAT E E +G+ I M GGP+ ++ A A AAF EF+ Sbjct 61 ASRCDACIGFHAQTLVKLGATKAEIEEMLGMAIYMGGGPSLMYAANALAAFEEFS 115 >gi|212709536|ref|ZP_03317664.1| hypothetical protein PROVALCAL_00578 [Providencia alcalifaciens DSM 30120] gi|212687874|gb|EEB47402.1| hypothetical protein PROVALCAL_00578 [Providencia alcalifaciens DSM 30120] Length=120 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 49/116 (43%), Positives = 66/116 (57%), Gaps = 3/116 (2%) Query 1 MSDQPRHHQVLDDLLPQHRALRHQIPQVYQRFVALGDAALTDGALSRKVKELVALAIAVV 60 MS +Q +P+ L +IP V F +L A +GAL K KEL+A+ I V Sbjct 7 MSKFTEINQNTHKTMPE---LGQRIPDVIAHFSSLIATASREGALDTKTKELIAIGITVA 63 Query 61 QGCDGCVASHAQAAVRAGATAQEAAEAIGVTILMHGGPATIHGARAYAAFCEFADT 116 CDGCVA H +A V G T QE AEA+GV ILM GGP+ ++ + + A+ EF +T Sbjct 64 SRCDGCVAFHTKALVDLGVTQQELAEALGVAILMGGGPSFMYAIQTWNAYNEFTNT 119 >gi|340619824|ref|YP_004738277.1| carboxymuconolactone decarboxylase family protein [Zobellia galactanivorans] gi|339734621|emb|CAZ97998.1| Carboxymuconolactone decarboxylase family protein [Zobellia galactanivorans] Length=115 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 45/107 (43%), Positives = 63/107 (59%), Gaps = 0/107 (0%) Query 7 HHQVLDDLLPQHRALRHQIPQVYQRFVALGDAALTDGALSRKVKELVALAIAVVQGCDGC 66 + + +DL + L IP F +L A+ +G LS K KEL+AL IA+ CDGC Sbjct 5 YSKRYNDLTRSIKELGVNIPDTIGGFNSLHKASTAEGVLSSKTKELIALGIAITVRCDGC 64 Query 67 VASHAQAAVRAGATAQEAAEAIGVTILMHGGPATIHGARAYAAFCEF 113 +A H A+++GA+A+E E IGV I+M GGPA I+G A A +F Sbjct 65 IAFHVSDALKSGASAEEILETIGVAIMMGGGPALIYGCEALEALNQF 111 >gi|282857562|ref|ZP_06266788.1| 4-carboxymuconolactone decarboxylase family protein [Pyramidobacter piscolens W5455] gi|282584598|gb|EFB89940.1| 4-carboxymuconolactone decarboxylase family protein [Pyramidobacter piscolens W5455] Length=124 Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 44/96 (46%), Positives = 62/96 (65%), Gaps = 0/96 (0%) Query 19 RALRHQIPQVYQRFVALGDAALTDGALSRKVKELVALAIAVVQGCDGCVASHAQAAVRAG 78 + LR P+ Q F ALG AAL DGALS K KEL+AL +A+ C+ C+ SH Q A++AG Sbjct 27 KKLREAAPEATQAFSALGAAALKDGALSLKTKELIALMLALQSHCEMCINSHVQNAIKAG 86 Query 79 ATAQEAAEAIGVTILMHGGPATIHGARAYAAFCEFA 114 T +E EA+GV +LM GGP++ + A+ +F+ Sbjct 87 VTREELVEALGVAVLMGGGPSSAYAGIVLEAYDQFS 122 >gi|319788550|ref|YP_004148025.1| alkylhydroperoxidase like protein [Pseudoxanthomonas suwonensis 11-1] gi|317467062|gb|ADV28794.1| alkylhydroperoxidase like protein, AhpD family [Pseudoxanthomonas suwonensis 11-1] Length=119 Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 48/101 (48%), Positives = 61/101 (61%), Gaps = 0/101 (0%) Query 13 DLLPQHRALRHQIPQVYQRFVALGDAALTDGALSRKVKELVALAIAVVQGCDGCVASHAQ 72 D+ ALR V Q F AL AA+ GAL K KEL+A+AI V CDGC+ HA+ Sbjct 12 DISRNLTALRTHNADVMQGFGALAKAAMAPGALDEKTKELIAMAIGVANRCDGCLGFHAK 71 Query 73 AAVRAGATAQEAAEAIGVTILMHGGPATIHGARAYAAFCEF 113 A VR GAT +E E +GV + M GGP+ ++ A A AA+ EF Sbjct 72 ALVRLGATPEEFREMLGVAVYMGGGPSLMYAANAQAAYDEF 112 >gi|260425271|ref|ZP_05779251.1| 4-carboxymuconolactone decarboxylase family protein [Citreicella sp. SE45] gi|260423211|gb|EEX16461.1| 4-carboxymuconolactone decarboxylase family protein [Citreicella sp. SE45] Length=112 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 46/108 (43%), Positives = 61/108 (57%), Gaps = 0/108 (0%) Query 7 HHQVLDDLLPQHRALRHQIPQVYQRFVALGDAALTDGALSRKVKELVALAIAVVQGCDGC 66 + L D R +R IP + FVAL AA DGAL +K KE +AL IAV C+ C Sbjct 3 YKDKLADTRNNLRNMRKAIPDTFAGFVALEQAASADGALDKKQKEFIALGIAVALRCEDC 62 Query 67 VASHAQAAVRAGATAQEAAEAIGVTILMHGGPATIHGARAYAAFCEFA 114 + +H A VR GAT +E E +G +I M GGP ++ A+A A F E + Sbjct 63 ILTHVSALVRIGATREEIGEILGTSIQMAGGPGLMYAAKALAVFDELS 110 >gi|254502081|ref|ZP_05114232.1| carboxymuconolactone decarboxylase family protein [Labrenzia alexandrii DFL-11] gi|222438152|gb|EEE44831.1| carboxymuconolactone decarboxylase family protein [Labrenzia alexandrii DFL-11] Length=124 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 45/94 (48%), Positives = 62/94 (66%), Gaps = 0/94 (0%) Query 21 LRHQIPQVYQRFVALGDAALTDGALSRKVKELVALAIAVVQGCDGCVASHAQAAVRAGAT 80 LR IP V + F + +A++ GAL K KEL+ALAI + CDGC+A H++AA + GA+ Sbjct 20 LRSGIPGVTKGFHDVARSAISPGALDSKTKELIALAIGIAARCDGCLAYHSKAAAKYGAS 79 Query 81 AQEAAEAIGVTILMHGGPATIHGARAYAAFCEFA 114 +E E IGV + M GGP+ I+GA A AAF F+ Sbjct 80 REEIMETIGVAVYMGGGPSMIYGAEALAAFDAFS 113 >gi|328545856|ref|YP_004305965.1| carboxymuconolactone decarboxylase family protein [Polymorphum gilvum SL003B-26A1] gi|326415596|gb|ADZ72659.1| Carboxymuconolactone decarboxylase family protein [Polymorphum gilvum SL003B-26A1] Length=116 Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 47/93 (51%), Positives = 58/93 (63%), Gaps = 0/93 (0%) Query 21 LRHQIPQVYQRFVALGDAALTDGALSRKVKELVALAIAVVQGCDGCVASHAQAAVRAGAT 80 LR IP V + F L AA+ G L K KEL+ALAI + CDGC+A H +AA + GAT Sbjct 20 LRGGIPAVTKGFHELARAAIQPGVLDSKTKELIALAIGIAARCDGCLAYHTKAAAKYGAT 79 Query 81 AQEAAEAIGVTILMHGGPATIHGARAYAAFCEF 113 +E E IGV + M GGP+ I+GA A AAF F Sbjct 80 REEVMETIGVAVYMGGGPSMIYGAEALAAFDAF 112 >gi|184154624|ref|YP_001842964.1| hypothetical protein LAF_0148 [Lactobacillus fermentum IFO 3956] gi|183225968|dbj|BAG26484.1| conserved hypothetical protein [Lactobacillus fermentum IFO 3956] Length=112 Score = 88.2 bits (217), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 45/110 (41%), Positives = 70/110 (64%), Gaps = 3/110 (2%) Query 1 MSDQPRHHQVLDDLLPQHRALRHQIPQVYQRFVALGDAALTDGALSRKVKELVALAIAVV 60 M+D + + L + ++ L + + + F AL A++ DG L K KEL++LAI+VV Sbjct 1 MTD---YQEQLAECQANNKNLFASVGEAGKGFGALHAASVADGVLDTKTKELMSLAISVV 57 Query 61 QGCDGCVASHAQAAVRAGATAQEAAEAIGVTILMHGGPATIHGARAYAAF 110 + C+GC+ H A ++AGA+ +E AEAI V I+M GGPAT++G +A A F Sbjct 58 ERCEGCITQHTAACIKAGASRKEFAEAISVAIMMAGGPATVYGGKALACF 107 >gi|114765515|ref|ZP_01444623.1| 4-carboxymuconolactone decarboxylase domain/ alkylhydroperoxidase AhpD family core domain protein [Pelagibaca bermudensis HTCC2601] gi|114542108|gb|EAU45140.1| 4-carboxymuconolactone decarboxylase domain/ alkylhydroperoxidase AhpD family core domain protein [Roseovarius sp. HTCC2601] Length=113 Score = 87.0 bits (214), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 44/95 (47%), Positives = 59/95 (63%), Gaps = 0/95 (0%) Query 19 RALRHQIPQVYQRFVALGDAALTDGALSRKVKELVALAIAVVQGCDGCVASHAQAAVRAG 78 R LR +P+ + F+ L AA D ALSRK KE VAL IAV C+GC+ SH A V+AG Sbjct 15 RELRKAMPETFAGFMELQKAATVDNALSRKQKEFVALGIAVAIRCEGCILSHVAALVKAG 74 Query 79 ATAQEAAEAIGVTILMHGGPATIHGARAYAAFCEF 113 AT +E + +G+++ M GGP + A+A A F E Sbjct 75 ATREELVDVLGMSVQMAGGPGLSYAAKALAIFDEL 109 Lambda K H 0.322 0.132 0.390 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 129033565320 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40