BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1768 Length=618 Score E Sequences producing significant alignments: (Bits) Value gi|57116908|ref|YP_177832.1| PE-PGRS family protein [Mycobacteri... 1014 0.0 gi|254550775|ref|ZP_05141222.1| PE-PGRS family protein [Mycobact... 223 7e-56 gi|306803470|ref|ZP_07440138.1| putative PE family protein [Myco... 220 5e-55 gi|289753863|ref|ZP_06513241.1| predicted protein [Mycobacterium... 220 6e-55 gi|289745800|ref|ZP_06505178.1| PE-PGRS family protein [Mycobact... 219 2e-54 gi|289447383|ref|ZP_06437127.1| PE-PGRS family protein [Mycobact... 218 2e-54 gi|339631822|ref|YP_004723464.1| PE-PGRS family protein [Mycobac... 218 2e-54 gi|289569833|ref|ZP_06450060.1| PE-PGRS family protein [Mycobact... 218 2e-54 gi|31792957|ref|NP_855450.1| PE-PGRS family protein [Mycobacteri... 218 2e-54 gi|254364602|ref|ZP_04980648.1| PE-PGRS family protein [Mycobact... 218 3e-54 gi|289574445|ref|ZP_06454672.1| predicted protein [Mycobacterium... 218 3e-54 gi|306784511|ref|ZP_07422833.1| putative PE family protein [Myco... 188 3e-45 gi|183985312|ref|YP_001853603.1| PE-PGRS family protein [Mycobac... 159 2e-36 gi|183985103|ref|YP_001853394.1| PE-PGRS family protein, PE_PGRS... 154 4e-35 gi|183982655|ref|YP_001850946.1| PE-PGRS family protein [Mycobac... 153 8e-35 gi|183981229|ref|YP_001849520.1| PE-PGRS family protein [Mycobac... 150 6e-34 gi|183981230|ref|YP_001849521.1| PE-PGRS family protein [Mycobac... 150 7e-34 gi|183982116|ref|YP_001850407.1| PE-PGRS family protein [Mycobac... 147 6e-33 gi|31792060|ref|NP_854553.1| PE-PGRS family protein [Mycobacteri... 146 1e-32 gi|15840285|ref|NP_335322.1| PE_PGRS family protein [Mycobacteri... 146 1e-32 gi|57116793|ref|YP_177763.1| PE-PGRS family protein [Mycobacteri... 146 1e-32 gi|183985012|ref|YP_001853303.1| PE-PGRS family protein [Mycobac... 143 1e-31 gi|183982067|ref|YP_001850358.1| PE-PGRS family protein [Mycobac... 142 1e-31 gi|183982971|ref|YP_001851262.1| PE-PGRS family protein [Mycobac... 142 1e-31 gi|31792644|ref|NP_855137.1| PE-PGRS family protein [Mycobacteri... 139 1e-30 gi|148824595|ref|YP_001289349.1| PE-PGRS family protein [Mycobac... 139 1e-30 gi|148663252|ref|YP_001284775.1| PE-PGRS family protein [Mycobac... 139 2e-30 gi|341603337|emb|CCC66018.1| PE-PGRS family protein [Mycobacteri... 138 3e-30 gi|340626466|ref|YP_004744918.1| PE-PGRS family protein [Mycobac... 138 3e-30 gi|121639312|ref|YP_979536.1| PE-PGRS family protein [Mycobacter... 138 3e-30 gi|31794568|ref|NP_857061.1| PE-PGRS family protein [Mycobacteri... 138 3e-30 gi|183981460|ref|YP_001849751.1| PE-PGRS family protein [Mycobac... 138 3e-30 gi|57117101|ref|YP_177968.1| PE-PGRS family protein [Mycobacteri... 137 5e-30 gi|15842981|ref|NP_338018.1| PE_PGRS family protein [Mycobacteri... 137 6e-30 gi|339296212|gb|AEJ48323.1| hypothetical protein CCDC5079_3134 [... 137 6e-30 gi|339633393|ref|YP_004725035.1| PE-PGRS family protein [Mycobac... 137 7e-30 gi|183982114|ref|YP_001850405.1| PE-PGRS family protein [Mycobac... 133 7e-29 gi|183981609|ref|YP_001849900.1| PE-PGRS family protein [Mycobac... 133 1e-28 gi|253800553|ref|YP_003033554.1| hypothetical protein TBMG_04114... 132 2e-28 gi|344221345|gb|AEN01976.1| PE-PGRS family protein [Mycobacteriu... 132 3e-28 gi|253799501|ref|YP_003032502.1| hypothetical protein TBMG_02531... 131 4e-28 gi|183985289|ref|YP_001853580.1| PE-PGRS family protein [Mycobac... 130 5e-28 gi|57116865|ref|YP_177812.1| PE-PGRS family protein [Mycobacteri... 130 9e-28 gi|339631131|ref|YP_004722773.1| PE-PGRS family protein [Mycobac... 129 1e-27 gi|148822669|ref|YP_001287423.1| PE-PGRS family protein [Mycobac... 129 1e-27 gi|148661242|ref|YP_001282765.1| PE-PGRS family protein [Mycobac... 129 1e-27 gi|183980507|ref|YP_001848798.1| PE-PGRS family protein [Mycobac... 128 2e-27 gi|340626105|ref|YP_004744557.1| PE-PGRS family protein [Mycobac... 128 3e-27 gi|148661609|ref|YP_001283132.1| PE-PGRS family protein [Mycobac... 127 5e-27 gi|289443277|ref|ZP_06433021.1| PE-PGRS family protein [Mycobact... 127 6e-27 >gi|57116908|ref|YP_177832.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv] gi|148661576|ref|YP_001283099.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] gi|148822983|ref|YP_001287737.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] 19 more sequence titles Length=618 Score = 1014 bits (2623), Expect = 0.0, Method: Compositional matrix adjust. Identities = 618/618 (100%), Positives = 618/618 (100%), Gaps = 0/618 (0%) Query 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR Sbjct 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 Query 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG 120 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG Sbjct 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG 120 Query 121 NGANGLPGTGQNGGDGGILYGNGGNGGSGGVNQAGGNGGNAGLWGNGGSGGAGGNATTAG 180 NGANGLPGTGQNGGDGGILYGNGGNGGSGGVNQAGGNGGNAGLWGNGGSGGAGGNATTAG Sbjct 121 NGANGLPGTGQNGGDGGILYGNGGNGGSGGVNQAGGNGGNAGLWGNGGSGGAGGNATTAG 180 Query 181 RNGFNGGAGGSGGLLWGNGGAGGAGGNGGPAPLVGGVGTTGGAGGNGGGAGLFYGFGGAG 240 RNGFNGGAGGSGGLLWGNGGAGGAGGNGGPAPLVGGVGTTGGAGGNGGGAGLFYGFGGAG Sbjct 181 RNGFNGGAGGSGGLLWGNGGAGGAGGNGGPAPLVGGVGTTGGAGGNGGGAGLFYGFGGAG 240 Query 241 GNGGMGGVAPSTGPSMGILPAGGVGGPGGSGGASALAFGSGGVGGAGGLGGPTDGTVQGV 300 GNGGMGGVAPSTGPSMGILPAGGVGGPGGSGGASALAFGSGGVGGAGGLGGPTDGTVQGV Sbjct 241 GNGGMGGVAPSTGPSMGILPAGGVGGPGGSGGASALAFGSGGVGGAGGLGGPTDGTVQGV 300 Query 301 GGFGGQGGNGGQSGLLFGNAGAGGAGAAGGAGTGDTESFGGHGGAGGDGGAVGLIGNGGA 360 GGFGGQGGNGGQSGLLFGNAGAGGAGAAGGAGTGDTESFGGHGGAGGDGGAVGLIGNGGA Sbjct 301 GGFGGQGGNGGQSGLLFGNAGAGGAGAAGGAGTGDTESFGGHGGAGGDGGAVGLIGNGGA 360 Query 361 GGTGSPGAVVGGNGGVGGLGGAGSPGGLLYGTGGAGGNGGPGGDGGTGATVGFAGSGGFG 420 GGTGSPGAVVGGNGGVGGLGGAGSPGGLLYGTGGAGGNGGPGGDGGTGATVGFAGSGGFG Sbjct 361 GGTGSPGAVVGGNGGVGGLGGAGSPGGLLYGTGGAGGNGGPGGDGGTGATVGFAGSGGFG 420 Query 421 GAGGIAQLFGTGGMGGSGGGIGAGTTTVVPPDVAPVGGTGGNGGRAGLLLGVGGMGGNGG 480 GAGGIAQLFGTGGMGGSGGGIGAGTTTVVPPDVAPVGGTGGNGGRAGLLLGVGGMGGNGG Sbjct 421 GAGGIAQLFGTGGMGGSGGGIGAGTTTVVPPDVAPVGGTGGNGGRAGLLLGVGGMGGNGG 480 Query 481 ATSVGGTLYAAGGNGGDGGLVWGNGGTGGSGGAGGAGSVGNGGAGGNAALLFGNGGAGGA 540 ATSVGGTLYAAGGNGGDGGLVWGNGGTGGSGGAGGAGSVGNGGAGGNAALLFGNGGAGGA Sbjct 481 ATSVGGTLYAAGGNGGDGGLVWGNGGTGGSGGAGGAGSVGNGGAGGNAALLFGNGGAGGA 540 Query 541 GGAGGIGAGGAGGFGAVLFGNGGAGGSGAPGGIGAGGNGGNALLVGNGGNGGAGTGGAAG 600 GGAGGIGAGGAGGFGAVLFGNGGAGGSGAPGGIGAGGNGGNALLVGNGGNGGAGTGGAAG Sbjct 541 GGAGGIGAGGAGGFGAVLFGNGGAGGSGAPGGIGAGGNGGNALLVGNGGNGGAGTGGAAG 600 Query 601 GAGGSGGLLFGQNGMPGP 618 GAGGSGGLLFGQNGMPGP Sbjct 601 GAGGSGGLLFGQNGMPGP 618 >gi|254550775|ref|ZP_05141222.1| PE-PGRS family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] Length=685 Score = 223 bits (568), Expect = 7e-56, Method: Compositional matrix adjust. Identities = 127/127 (100%), Positives = 127/127 (100%), Gaps = 0/127 (0%) Query 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR Sbjct 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 Query 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG 120 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG Sbjct 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG 120 Query 121 NGANGLP 127 NGANGLP Sbjct 121 NGANGLP 127 >gi|306803470|ref|ZP_07440138.1| putative PE family protein [Mycobacterium tuberculosis SUMu008] gi|308349869|gb|EFP38720.1| putative PE family protein [Mycobacterium tuberculosis SUMu008] Length=353 Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust. Identities = 127/127 (100%), Positives = 127/127 (100%), Gaps = 0/127 (0%) Query 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR Sbjct 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 Query 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG 120 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG Sbjct 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG 120 Query 121 NGANGLP 127 NGANGLP Sbjct 121 NGANGLP 127 >gi|289753863|ref|ZP_06513241.1| predicted protein [Mycobacterium tuberculosis EAS054] gi|289694450|gb|EFD61879.1| predicted protein [Mycobacterium tuberculosis EAS054] Length=418 Score = 220 bits (561), Expect = 6e-55, Method: Compositional matrix adjust. Identities = 127/127 (100%), Positives = 127/127 (100%), Gaps = 0/127 (0%) Query 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR Sbjct 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 Query 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG 120 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG Sbjct 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG 120 Query 121 NGANGLP 127 NGANGLP Sbjct 121 NGANGLP 127 >gi|289745800|ref|ZP_06505178.1| PE-PGRS family protein [Mycobacterium tuberculosis 02_1987] gi|289686328|gb|EFD53816.1| PE-PGRS family protein [Mycobacterium tuberculosis 02_1987] Length=319 Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 127/127 (100%), Positives = 127/127 (100%), Gaps = 0/127 (0%) Query 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR Sbjct 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 Query 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG 120 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG Sbjct 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG 120 Query 121 NGANGLP 127 NGANGLP Sbjct 121 NGANGLP 127 >gi|289447383|ref|ZP_06437127.1| PE-PGRS family protein [Mycobacterium tuberculosis CPHL_A] gi|289420341|gb|EFD17542.1| PE-PGRS family protein [Mycobacterium tuberculosis CPHL_A] Length=592 Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 127/127 (100%), Positives = 127/127 (100%), Gaps = 0/127 (0%) Query 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR Sbjct 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 Query 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG 120 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG Sbjct 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG 120 Query 121 NGANGLP 127 NGANGLP Sbjct 121 NGANGLP 127 >gi|339631822|ref|YP_004723464.1| PE-PGRS family protein [Mycobacterium africanum GM041182] gi|339331178|emb|CCC26860.1| PE-PGRS family protein [Mycobacterium africanum GM041182] Length=632 Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 127/127 (100%), Positives = 127/127 (100%), Gaps = 0/127 (0%) Query 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR Sbjct 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 Query 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG 120 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG Sbjct 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG 120 Query 121 NGANGLP 127 NGANGLP Sbjct 121 NGANGLP 127 >gi|289569833|ref|ZP_06450060.1| PE-PGRS family protein [Mycobacterium tuberculosis T17] gi|340626780|ref|YP_004745232.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] gi|289543587|gb|EFD47235.1| PE-PGRS family protein [Mycobacterium tuberculosis T17] gi|340004970|emb|CCC44118.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] Length=624 Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 127/127 (100%), Positives = 127/127 (100%), Gaps = 0/127 (0%) Query 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR Sbjct 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 Query 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG 120 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG Sbjct 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG 120 Query 121 NGANGLP 127 NGANGLP Sbjct 121 NGANGLP 127 >gi|31792957|ref|NP_855450.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97] gi|224990154|ref|YP_002644841.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|31618548|emb|CAD94500.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97] gi|224773267|dbj|BAH26073.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|341601697|emb|CCC64370.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis BCG str. Moreau RDJ] Length=624 Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 127/127 (100%), Positives = 127/127 (100%), Gaps = 0/127 (0%) Query 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR Sbjct 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 Query 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG 120 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG Sbjct 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG 120 Query 121 NGANGLP 127 NGANGLP Sbjct 121 NGANGLP 127 >gi|254364602|ref|ZP_04980648.1| PE-PGRS family protein [Mycobacterium tuberculosis str. Haarlem] gi|134150116|gb|EBA42161.1| PE-PGRS family protein [Mycobacterium tuberculosis str. Haarlem] Length=886 Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 127/127 (100%), Positives = 127/127 (100%), Gaps = 0/127 (0%) Query 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR Sbjct 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 Query 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG 120 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG Sbjct 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG 120 Query 121 NGANGLP 127 NGANGLP Sbjct 121 NGANGLP 127 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 193/194 (99%), Positives = 193/194 (99%), Gaps = 0/194 (0%) Query 425 IAQLFGTGGMGGSGGGIGAGTTTVVPPDVAPVGGTGGNGGRAGLLLGVGGMGGNGGATSV 484 IAQLFGTGGMGGSGGGIGAGTTTVVPPDVAPVGGTGGNGGRAGLLLGVGGMGGNGGATSV Sbjct 693 IAQLFGTGGMGGSGGGIGAGTTTVVPPDVAPVGGTGGNGGRAGLLLGVGGMGGNGGATSV 752 Query 485 GGTLYAAGGNGGDGGLVWGNGGTGGSGGAGGAGSVGNGGAGGNAALLFGNGGAGGAGGAG 544 GGTLY AGGNGGDGGLVWGNGGTGGSGGAGGAGSVGNGGAGGNAALLFGNGGAGGAGGAG Sbjct 753 GGTLYTAGGNGGDGGLVWGNGGTGGSGGAGGAGSVGNGGAGGNAALLFGNGGAGGAGGAG 812 Query 545 GIGAGGAGGFGAVLFGNGGAGGSGAPGGIGAGGNGGNALLVGNGGNGGAGTGGAAGGAGG 604 GIGAGGAGGFGAVLFGNGGAGGSGAPGGIGAGGNGGNALLVGNGGNGGAGTGGAAGGAGG Sbjct 813 GIGAGGAGGFGAVLFGNGGAGGSGAPGGIGAGGNGGNALLVGNGGNGGAGTGGAAGGAGG 872 Query 605 SGGLLFGQNGMPGP 618 SGGLLFGQNGMPGP Sbjct 873 SGGLLFGQNGMPGP 886 >gi|289574445|ref|ZP_06454672.1| predicted protein [Mycobacterium tuberculosis K85] gi|289538876|gb|EFD43454.1| predicted protein [Mycobacterium tuberculosis K85] Length=524 Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 127/127 (100%), Positives = 127/127 (100%), Gaps = 0/127 (0%) Query 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR Sbjct 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 Query 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG 120 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG Sbjct 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG 120 Query 121 NGANGLP 127 NGANGLP Sbjct 121 NGANGLP 127 Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 192/192 (100%), Positives = 192/192 (100%), Gaps = 0/192 (0%) Query 427 QLFGTGGMGGSGGGIGAGTTTVVPPDVAPVGGTGGNGGRAGLLLGVGGMGGNGGATSVGG 486 QLFGTGGMGGSGGGIGAGTTTVVPPDVAPVGGTGGNGGRAGLLLGVGGMGGNGGATSVGG Sbjct 333 QLFGTGGMGGSGGGIGAGTTTVVPPDVAPVGGTGGNGGRAGLLLGVGGMGGNGGATSVGG 392 Query 487 TLYAAGGNGGDGGLVWGNGGTGGSGGAGGAGSVGNGGAGGNAALLFGNGGAGGAGGAGGI 546 TLYAAGGNGGDGGLVWGNGGTGGSGGAGGAGSVGNGGAGGNAALLFGNGGAGGAGGAGGI Sbjct 393 TLYAAGGNGGDGGLVWGNGGTGGSGGAGGAGSVGNGGAGGNAALLFGNGGAGGAGGAGGI 452 Query 547 GAGGAGGFGAVLFGNGGAGGSGAPGGIGAGGNGGNALLVGNGGNGGAGTGGAAGGAGGSG 606 GAGGAGGFGAVLFGNGGAGGSGAPGGIGAGGNGGNALLVGNGGNGGAGTGGAAGGAGGSG Sbjct 453 GAGGAGGFGAVLFGNGGAGGSGAPGGIGAGGNGGNALLVGNGGNGGAGTGGAAGGAGGSG 512 Query 607 GLLFGQNGMPGP 618 GLLFGQNGMPGP Sbjct 513 GLLFGQNGMPGP 524 >gi|306784511|ref|ZP_07422833.1| putative PE family protein [Mycobacterium tuberculosis SUMu003] gi|308330754|gb|EFP19605.1| putative PE family protein [Mycobacterium tuberculosis SUMu003] Length=404 Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 124/173 (72%), Positives = 125/173 (73%), Gaps = 45/173 (26%) Query 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR Sbjct 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 Query 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG 120 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLI Sbjct 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLI- 119 Query 121 NGANGLPGTGQNGGDGGILYGNGGNGGSGGVNQAGGNGGNAGLWGNGGSGGAG 173 GNG +G G Sbjct 120 --------------------------------------------GNGANGLPG 128 >gi|183985312|ref|YP_001853603.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183178638|gb|ACC43748.1| PE-PGRS family protein [Mycobacterium marinum M] Length=846 Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 83/129 (65%), Positives = 106/129 (83%), Gaps = 4/129 (3%) Query 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAA-GGDEVSAAIAALFGAHA 59 MSY+ PE++ AAA +++ IGSS+ ANA+AAAPTTAL++A G DEVSAA+ A+FG HA Sbjct 1 MSYVFASPEVLNAAAAEVSTIGSSLQTANASAAAPTTALLSALGADEVSAAVTAMFGNHA 60 Query 60 RAYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATA---QSVQQDLLNLINAPTQALLGR 116 +AYQA+S QAA FH++FV AL AG ++Y+ AEA+TA QS+ QDLLN++NAPTQALLGR Sbjct 61 QAYQAVSTQAAEFHDRFVAALTAGADAYSSAEASTAATLQSLPQDLLNVVNAPTQALLGR 120 Query 117 PLIGNGANG 125 LIGNGANG Sbjct 121 ALIGNGANG 129 >gi|183985103|ref|YP_001853394.1| PE-PGRS family protein, PE_PGRS15 [Mycobacterium marinum M] gi|183178429|gb|ACC43539.1| PE-PGRS family protein, PE_PGRS15 [Mycobacterium marinum M] Length=681 Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 87/142 (62%), Positives = 109/142 (77%), Gaps = 3/142 (2%) Query 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 MSY+V +L+A+ AT+LA I ++++ ANAAA PTT L AAG DEVSAA+AALF +HAR Sbjct 1 MSYVVAASDLLASTATELARIDAALNTANAAAVLPTTVLQAAGADEVSAAVAALFSSHAR 60 Query 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATA---QSVQQDLLNLINAPTQALLGRP 117 AYQALS QA FH+ F + L+ G SYA AEAA Q +++D+L L+NAPTQALLGRP Sbjct 61 AYQALSVQAGQFHQWFTQTLSGAGLSYASAEAANVSPLQVLERDVLGLVNAPTQALLGRP 120 Query 118 LIGNGANGLPGTGQNGGDGGIL 139 +IGNGA+G PG+G NG DGGIL Sbjct 121 IIGNGADGAPGSGANGADGGIL 142 >gi|183982655|ref|YP_001850946.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183175981|gb|ACC41091.1| PE-PGRS family protein [Mycobacterium marinum M] Length=625 Score = 153 bits (387), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 95/127 (75%), Positives = 111/127 (88%), Gaps = 1/127 (0%) Query 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 MSYL+ PE+VAAAATDLA++GSSISAANAAAAAPT +++AAG DEVSA +AALF AHA+ Sbjct 1 MSYLIAAPEMVAAAATDLASVGSSISAANAAAAAPTMSVLAAGADEVSAVVAALFDAHAQ 60 Query 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG 120 AYQ+LSAQAA+FHEQFV+AL AG SYA+AEAA+ + QD LNLINAPTQAL GRPLIG Sbjct 61 AYQSLSAQAALFHEQFVQALNAGAGSYALAEAASVSPL-QDALNLINAPTQALFGRPLIG 119 Query 121 NGANGLP 127 NGA+G P Sbjct 120 NGADGAP 126 >gi|183981229|ref|YP_001849520.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183174555|gb|ACC39665.1| PE-PGRS family protein [Mycobacterium marinum M] Length=946 Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 79/124 (64%), Positives = 98/124 (80%), Gaps = 1/124 (0%) Query 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 M++++V PE+V AAA+DLANIGS+I+ AN A AAPT L+AAG DEVS AIA+LF HA Sbjct 1 MAFVLVAPEMVTAAASDLANIGSAINTANTAVAAPTAELLAAGTDEVSEAIASLFSGHAL 60 Query 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG 120 YQ+L A+ FH+QFV AL AGG Y+ AEAA A + QDLLN++NAPTQALLGRPLIG Sbjct 61 DYQSLGARMTAFHDQFVAALTAGGGLYSSAEAAAATPL-QDLLNVVNAPTQALLGRPLIG 119 Query 121 NGAN 124 +GA+ Sbjct 120 DGAD 123 >gi|183981230|ref|YP_001849521.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183174556|gb|ACC39666.1| PE-PGRS family protein [Mycobacterium marinum M] Length=963 Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 79/124 (64%), Positives = 98/124 (80%), Gaps = 1/124 (0%) Query 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 M++++V PE+V AAA+DLANIGS+I+ AN A AAPT L+AAG DEVS AIA+LF HA Sbjct 1 MAFVLVAPEMVTAAASDLANIGSAINTANTAVAAPTAELLAAGTDEVSEAIASLFSGHAL 60 Query 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG 120 YQ+L A+ FH+QFV AL AGG Y+ AEAA A + QDLLN++NAPTQALLGRPLIG Sbjct 61 DYQSLGARMTAFHDQFVAALTAGGGLYSSAEAAAATPL-QDLLNVVNAPTQALLGRPLIG 119 Query 121 NGAN 124 +GA+ Sbjct 120 DGAD 123 >gi|183982116|ref|YP_001850407.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183175442|gb|ACC40552.1| PE-PGRS family protein [Mycobacterium marinum M] Length=1386 Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 76/123 (62%), Positives = 93/123 (76%), Gaps = 3/123 (2%) Query 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 MS++ V PE+VA AA+DL +GS+ISAAN AAA TT ++AAG DEVSA IAALFG HA Sbjct 1 MSFVGVAPEMVAVAASDLERLGSTISAANVAAAGSTTTILAAGADEVSAVIAALFGTHAL 60 Query 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATA---QSVQQDLLNLINAPTQALLGRP 117 YQA+S Q ++FHEQFV+ L G +Y+ AE Q+V+QDLLNL+NAPTQAL GRP Sbjct 61 EYQAISTQLSVFHEQFVQTLTNGVGAYSAAELVNVLPLQNVEQDLLNLVNAPTQALFGRP 120 Query 118 LIG 120 LIG Sbjct 121 LIG 123 >gi|31792060|ref|NP_854553.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97] gi|31617647|emb|CAD93757.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97] Length=608 Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 82/127 (65%), Positives = 100/127 (79%), Gaps = 1/127 (0%) Query 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 MSY++ PE+VAAAA +LA IGS++SAANAAA APTT ++AAG DEVSAA+A+LF HA+ Sbjct 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60 Query 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG 120 AYQ L QAA FHE+F++AL+ +Y AEAA A +QQ LN+INAPTQ LLGRPLIG Sbjct 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQ-ALNVINAPTQTLLGRPLIG 119 Query 121 NGANGLP 127 NG NG P Sbjct 120 NGTNGAP 126 >gi|15840285|ref|NP_335322.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] gi|121636795|ref|YP_977018.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148822080|ref|YP_001286834.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] 18 more sequence titles Length=609 Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 82/127 (65%), Positives = 100/127 (79%), Gaps = 1/127 (0%) Query 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 MSY++ PE+VAAAA +LA IGS++SAANAAA APTT ++AAG DEVSAA+A+LF HA+ Sbjct 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60 Query 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG 120 AYQ L QAA FHE+F++AL+ +Y AEAA A +QQ LN+INAPTQ LLGRPLIG Sbjct 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQ-ALNVINAPTQTLLGRPLIG 119 Query 121 NGANGLP 127 NG NG P Sbjct 120 NGTNGAP 126 >gi|57116793|ref|YP_177763.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv] gi|148660649|ref|YP_001282172.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] gi|7476127|pir||H70816 hypothetical glycine-rich protein Rv0872c - Mycobacterium tuberculosis (strain H37RV) gi|38490245|emb|CAE55332.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv] gi|148504801|gb|ABQ72610.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] Length=606 Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 82/127 (65%), Positives = 100/127 (79%), Gaps = 1/127 (0%) Query 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 MSY++ PE+VAAAA +LA IGS++SAANAAA APTT ++AAG DEVSAA+A+LF HA+ Sbjct 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60 Query 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG 120 AYQ L QAA FHE+F++AL+ +Y AEAA A +QQ LN+INAPTQ LLGRPLIG Sbjct 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQ-ALNVINAPTQTLLGRPLIG 119 Query 121 NGANGLP 127 NG NG P Sbjct 120 NGTNGAP 126 >gi|183985012|ref|YP_001853303.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183178338|gb|ACC43448.1| PE-PGRS family protein [Mycobacterium marinum M] Length=1451 Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 94/140 (68%), Positives = 114/140 (82%), Gaps = 1/140 (0%) Query 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 MSYL+ PEL+ +AA DLA I S++SAAN +AA PTT ++AAG DEVSAAIAALFGAHA+ Sbjct 1 MSYLIAAPELMQSAAADLAGIESALSAANVSAAVPTTQILAAGADEVSAAIAALFGAHAQ 60 Query 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG 120 AYQAL + FH++FV+AL +G SYA AEAA+ +Q L +L+NAPTQALLGRPLIG Sbjct 61 AYQALGSHVTAFHQEFVQALNSGAASYANAEAASIAPLQA-LYDLVNAPTQALLGRPLIG 119 Query 121 NGANGLPGTGQNGGDGGILY 140 NGANG PGTGQNGGDGG+L+ Sbjct 120 NGANGAPGTGQNGGDGGLLF 139 Score = 37.7 bits (86), Expect = 7.1, Method: Compositional matrix adjust. Identities = 18/25 (72%), Positives = 19/25 (76%), Gaps = 0/25 (0%) Query 98 VQQDLLNLINAPTQALLGRPLIGNG 122 +QQ LN INAP AL GRPLIGNG Sbjct 779 LQQQTLNAINAPFDALTGRPLIGNG 803 >gi|183982067|ref|YP_001850358.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183175393|gb|ACC40503.1| PE-PGRS family protein [Mycobacterium marinum M] Length=737 Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 84/143 (59%), Positives = 105/143 (74%), Gaps = 5/143 (3%) Query 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 MSY++ PE++A AATDLA IG+++ +AN AAAAP T ++AAG D++SAA+AALF HA Sbjct 1 MSYVIAAPEMLAGAATDLAGIGAALQSANGAAAAPITGVLAAGADDISAAVAALFSGHAL 60 Query 61 AYQALSAQAAMFHEQFVRAL---AAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRP 117 YQALS Q A FH+QFV AL A + A A Q+V+Q LL +INAPTQALLGRP Sbjct 61 DYQALSTQMAGFHQQFVTALNSAGASYAAAEAASANPLQAVEQQLLGVINAPTQALLGRP 120 Query 118 LIGNGANGLPGTGQNGGDGGILY 140 LIG+G G P GQNGGDGG+L+ Sbjct 121 LIGDGTAGAP--GQNGGDGGLLW 141 >gi|183982971|ref|YP_001851262.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183176297|gb|ACC41407.1| PE-PGRS family protein [Mycobacterium marinum M] Length=675 Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 96/136 (71%), Positives = 108/136 (80%), Gaps = 3/136 (2%) Query 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 M+YLV VP+ VA AA +LA IGSSI+ A+AAAAAPTT L AAG DE+SAAIA LFG HA+ Sbjct 1 MTYLVTVPQTVATAAGNLAAIGSSITDASAAAAAPTTELAAAGADEISAAIAQLFGTHAQ 60 Query 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAA---TAQSVQQDLLNLINAPTQALLGRP 117 YQ +SAQA FH+QF R+L+A SYA AEA T QSVQQDLL L+NAPTQALLGRP Sbjct 61 IYQRISAQAMAFHDQFARSLSAASGSYANAEATNTLTLQSVQQDLLGLVNAPTQALLGRP 120 Query 118 LIGNGANGLPGTGQNG 133 LIGNGANG PGTG NG Sbjct 121 LIGNGANGAPGTGANG 136 >gi|31792644|ref|NP_855137.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97] gi|31618234|emb|CAD96152.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97] Length=1408 Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 73/122 (60%), Positives = 92/122 (76%), Gaps = 3/122 (2%) Query 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 MS ++V PE VAAAA D+A IGSSI AN+AAA TT+++AAG DEVSAAIA LFG+HAR Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQ---SVQQDLLNLINAPTQALLGRP 117 YQA+S Q A FH++F + L+A SY AEA A +++ ++LN +NAPTQALLGRP Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 118 LI 119 LI Sbjct 121 LI 122 >gi|148824595|ref|YP_001289349.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] gi|148723122|gb|ABR07747.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] Length=731 Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 85/125 (68%), Positives = 102/125 (82%), Gaps = 3/125 (2%) Query 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 MS+++ PE++AAAATDLA I S+ISAA AAAAAPT + AAG DEVS AI+ALFG HA+ Sbjct 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60 Query 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG 120 AYQALSAQA +FH+QFV+AL +GGN YA AE+ T V+Q +LN INAPTQ L GRPLIG Sbjct 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHT---VEQMVLNAINAPTQTLFGRPLIG 117 Query 121 NGANG 125 +GANG Sbjct 118 DGANG 122 >gi|148663252|ref|YP_001284775.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] gi|148507404|gb|ABQ75213.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] Length=582 Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 85/125 (68%), Positives = 102/125 (82%), Gaps = 3/125 (2%) Query 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 MS+++ PE++AAAATDLA I S+ISAA AAAAAPT + AAG DEVS AI+ALFG HA+ Sbjct 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60 Query 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG 120 AYQALSAQA +FH+QFV+AL +GGN YA AE+ T V+Q +LN INAPTQ L GRPLIG Sbjct 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHT---VEQMVLNAINAPTQTLFGRPLIG 117 Query 121 NGANG 125 +GANG Sbjct 118 DGANG 122 >gi|341603337|emb|CCC66018.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=750 Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 85/125 (68%), Positives = 102/125 (82%), Gaps = 3/125 (2%) Query 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 MS+++ PE++AAAATDLA I S+ISAA AAAAAPT + AAG DEVS AI+ALFG HA+ Sbjct 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60 Query 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG 120 AYQALSAQA +FH+QFV+AL +GGN YA AE+ T V+Q +LN INAPTQ L GRPLIG Sbjct 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHT---VEQMVLNAINAPTQTLFGRPLIG 117 Query 121 NGANG 125 +GANG Sbjct 118 DGANG 122 >gi|340626466|ref|YP_004744918.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] gi|340004656|emb|CCC43800.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] Length=1006 Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 73/122 (60%), Positives = 93/122 (77%), Gaps = 3/122 (2%) Query 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 MS ++V PELVAAAA+D+A IGS AAN+ AA TT+++AAG DEVSAAIA LFG+HAR Sbjct 1 MSLVIVTPELVAAAASDVARIGSGFGAANSTAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQ---SVQQDLLNLINAPTQALLGRP 117 YQA+S Q A FH++FV+ L+A SY AEA A +++ ++LN +NAPTQALLGRP Sbjct 61 EYQAISTQVAAFHDRFVQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 118 LI 119 LI Sbjct 121 LI 122 >gi|121639312|ref|YP_979536.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224991809|ref|YP_002646498.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|121494960|emb|CAL73446.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224774924|dbj|BAH27730.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] Length=750 Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 85/125 (68%), Positives = 102/125 (82%), Gaps = 3/125 (2%) Query 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 MS+++ PE++AAAATDLA I S+ISAA AAAAAPT + AAG DEVS AI+ALFG HA+ Sbjct 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60 Query 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG 120 AYQALSAQA +FH+QFV+AL +GGN YA AE+ T V+Q +LN INAPTQ L GRPLIG Sbjct 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHT---VEQMVLNAINAPTQTLFGRPLIG 117 Query 121 NGANG 125 +GANG Sbjct 118 DGANG 122 >gi|31794568|ref|NP_857061.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97] gi|31620165|emb|CAD95608.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97] Length=749 Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 85/125 (68%), Positives = 102/125 (82%), Gaps = 3/125 (2%) Query 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 MS+++ PE++AAAATDLA I S+ISAA AAAAAPT + AAG DEVS AI+ALFG HA+ Sbjct 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60 Query 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG 120 AYQALSAQA +FH+QFV+AL +GGN YA AE+ T V+Q +LN INAPTQ L GRPLIG Sbjct 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHT---VEQMVLNAINAPTQTLFGRPLIG 117 Query 121 NGANG 125 +GANG Sbjct 118 DGANG 122 >gi|183981460|ref|YP_001849751.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183174786|gb|ACC39896.1| PE-PGRS family protein [Mycobacterium marinum M] Length=1483 Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 80/124 (65%), Positives = 95/124 (77%), Gaps = 3/124 (2%) Query 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 MS++ V PE+VAAA DLA IGSSISAANAAA A TT +V A DEVSAAIAALFG+HAR Sbjct 1 MSFVNVAPEMVAAAVEDLAGIGSSISAANAAAVALTTDVVPAAADEVSAAIAALFGSHAR 60 Query 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG 120 YQA+SAQ+A FHE+ V+ L +G ++Y E A A QQ+LLN +N PTQA LGRPLIG Sbjct 61 EYQAISAQSAAFHERLVQTLRSGASAYLGTELANA---QQNLLNAVNGPTQAWLGRPLIG 117 Query 121 NGAN 124 NG + Sbjct 118 NGTD 121 >gi|57117101|ref|YP_177968.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv] gi|253800434|ref|YP_003033435.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435] gi|7441235|pir||C70974 hypothetical glycine-rich protein Rv3388 - Mycobacterium tuberculosis (strain H37RV) gi|38490366|emb|CAE55593.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv] gi|253321937|gb|ACT26540.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435] gi|328460166|gb|AEB05589.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207] gi|344221227|gb|AEN01858.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2] Length=731 Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 87/132 (66%), Positives = 105/132 (80%), Gaps = 6/132 (4%) Query 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 MS+++ PE++AAAATDLA I S+ISAA AAAAAPT + AAG DEVS AI+ALFG HA+ Sbjct 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60 Query 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG 120 AYQALSAQA +FH+QFV+AL +GGN YA AE+ T V+Q +LN INAPTQ L GRPLIG Sbjct 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHT---VEQMVLNAINAPTQTLFGRPLIG 117 Query 121 NGANGLPGTGQN 132 +GAN GT +N Sbjct 118 DGAN---GTAEN 126 >gi|15842981|ref|NP_338018.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] gi|13883320|gb|AAK47832.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] Length=775 Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 85/125 (68%), Positives = 102/125 (82%), Gaps = 3/125 (2%) Query 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 MS+++ PE++AAAATDLA I S+ISAA AAAAAPT + AAG DEVS AI+ALFG HA+ Sbjct 45 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 104 Query 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG 120 AYQALSAQA +FH+QFV+AL +GGN YA AE+ T V+Q +LN INAPTQ L GRPLIG Sbjct 105 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHT---VEQMVLNAINAPTQTLFGRPLIG 161 Query 121 NGANG 125 +GANG Sbjct 162 DGANG 166 >gi|339296212|gb|AEJ48323.1| hypothetical protein CCDC5079_3134 [Mycobacterium tuberculosis CCDC5079] Length=731 Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 87/132 (66%), Positives = 105/132 (80%), Gaps = 6/132 (4%) Query 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 MS+++ PE++AAAATDLA I S+ISAA AAAAAPT + AAG DEVS AI+ALFG HA+ Sbjct 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60 Query 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG 120 AYQALSAQA +FH+QFV+AL +GGN YA AE+ T V+Q +LN INAPTQ L GRPLIG Sbjct 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHT---VEQMVLNAINAPTQTLFGRPLIG 117 Query 121 NGANGLPGTGQN 132 +GAN GT +N Sbjct 118 DGAN---GTAEN 126 >gi|339633393|ref|YP_004725035.1| PE-PGRS family protein [Mycobacterium africanum GM041182] gi|339332749|emb|CCC28470.1| PE-PGRS family protein [Mycobacterium africanum GM041182] Length=724 Score = 137 bits (344), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 87/132 (66%), Positives = 105/132 (80%), Gaps = 6/132 (4%) Query 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 MS+++ PE++AAAATDLA I S+ISAA AAAAAPT + AAG DEVS AI+ALFG HA+ Sbjct 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60 Query 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG 120 AYQALSAQA +FH+QFV+AL +GGN YA AE+ T V+Q +LN INAPTQ L GRPLIG Sbjct 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHT---VEQMVLNAINAPTQTLFGRPLIG 117 Query 121 NGANGLPGTGQN 132 +GAN GT +N Sbjct 118 DGAN---GTAEN 126 >gi|183982114|ref|YP_001850405.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183175440|gb|ACC40550.1| PE-PGRS family protein [Mycobacterium marinum M] Length=1397 Score = 133 bits (335), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 75/124 (61%), Positives = 95/124 (77%), Gaps = 3/124 (2%) Query 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 MS++ V PE+V AAA+DL+ I S+I+ AN+ AAA TT ++ A DEVSAAIAALFG HA+ Sbjct 1 MSFVSVTPEMVVAAASDLSGINSAIAQANSVAAAATTTVLPAAADEVSAAIAALFGTHAQ 60 Query 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG 120 YQA+SA+ A FH++FV++L G SY AEAA A +Q LL L+NAPTQAL GRPLIG Sbjct 61 QYQAISAELAAFHDRFVQSLNTGAGSYLRAEAANA---EQGLLGLVNAPTQALFGRPLIG 117 Query 121 NGAN 124 +GAN Sbjct 118 DGAN 121 >gi|183981609|ref|YP_001849900.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183174935|gb|ACC40045.1| PE-PGRS family protein [Mycobacterium marinum M] Length=3634 Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 79/124 (64%), Positives = 97/124 (79%), Gaps = 3/124 (2%) Query 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 MSY+ + PE+V++AA +LANIGS++SAANAAAA TT L+AAG DEVS IAALFGA+ Sbjct 1 MSYMSISPEIVSSAAGELANIGSTVSAANAAAAVATTELLAAGSDEVSTRIAALFGANGV 60 Query 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG 120 YQA+SAQ A FH++FV AL G +SY AEA +V+Q+LLN +NAP Q LLGRPLIG Sbjct 61 EYQAISAQIASFHDRFVAALNTGTSSYVWAEAT---NVEQNLLNAVNAPVQTLLGRPLIG 117 Query 121 NGAN 124 NGAN Sbjct 118 NGAN 121 >gi|253800553|ref|YP_003033554.1| hypothetical protein TBMG_04114 [Mycobacterium tuberculosis KZN 1435] gi|253322056|gb|ACT26659.1| predicted protein [Mycobacterium tuberculosis KZN 1435] gi|328460284|gb|AEB05707.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207] Length=1767 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 80/125 (64%), Positives = 100/125 (80%), Gaps = 3/125 (2%) Query 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 MS++++ PE+V+AAA DLAN+GS+ISAAN AAAA TT ++AAG DEVSA IAALFG + Sbjct 1 MSFVLISPEVVSAAAGDLANVGSTISAANKAAAAATTQVLAAGADEVSARIAALFGMYGL 60 Query 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG 120 YQA+SAQ A +H+QFV+ L G SY +AEA +V+Q+LLNLINAPTQ LLGRPLIG Sbjct 61 EYQAISAQVAAYHQQFVQTLRTGAASYMLAEAT---NVEQNLLNLINAPTQTLLGRPLIG 117 Query 121 NGANG 125 +GAN Sbjct 118 DGANA 122 >gi|344221345|gb|AEN01976.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2] Length=1787 Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 80/125 (64%), Positives = 100/125 (80%), Gaps = 3/125 (2%) Query 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 MS++++ PE+V+AAA DLAN+GS+ISAAN AAAA TT ++AAG DEVSA IAALFG + Sbjct 1 MSFVLISPEVVSAAAGDLANVGSTISAANKAAAAATTQVLAAGADEVSARIAALFGMYGL 60 Query 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG 120 YQA+SAQ A +H+QFV+ L G SY +AEA +V+Q+LLNLINAPTQ LLGRPLIG Sbjct 61 EYQAISAQVAAYHQQFVQTLRTGAASYMLAEAT---NVEQNLLNLINAPTQTLLGRPLIG 117 Query 121 NGANG 125 +GAN Sbjct 118 DGANA 122 >gi|253799501|ref|YP_003032502.1| hypothetical protein TBMG_02531 [Mycobacterium tuberculosis KZN 1435] gi|253321004|gb|ACT25607.1| predicted protein [Mycobacterium tuberculosis KZN 1435] gi|328459249|gb|AEB04672.1| hypothetical protein TBSG_02543 [Mycobacterium tuberculosis KZN 4207] Length=1408 Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 75/122 (62%), Positives = 94/122 (78%), Gaps = 3/122 (2%) Query 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 MS ++V PE VAAAA+D+A IGSSI AANAAAA TT+++AAG DEVSAAIA LFG+HAR Sbjct 2 MSLVIVTPETVAAAASDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 61 Query 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQ---SVQQDLLNLINAPTQALLGRP 117 YQA+S Q A FH++F + L+A SY AEA A +++ ++LN +NAPTQALLGRP Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121 Query 118 LI 119 LI Sbjct 122 LI 123 >gi|183985289|ref|YP_001853580.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183178615|gb|ACC43725.1| PE-PGRS family protein [Mycobacterium marinum M] Length=723 Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 86/151 (57%), Positives = 109/151 (73%), Gaps = 4/151 (2%) Query 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 MSYL+V PEL+ +AATDL I S++S AN AAA PTT ++AAG DEVSAA+A+LF + + Sbjct 1 MSYLLVTPELLTSAATDLEGIASALSTANLAAAVPTTGVLAAGADEVSAAVASLFAGYGQ 60 Query 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATA---QSVQQDLLNLINAPTQALLGRP 117 AYQ++S QA F QF++A+ G +YA AEAA+ Q+ + +L +INAPTQ LLGRP Sbjct 61 AYQSISLQANAFQAQFIQAINGAGGAYAAAEAASTSPLQAFEDTVLGVINAPTQTLLGRP 120 Query 118 LIGNGANGLPGTGQNGGDGGILYGNGGNGGS 148 LIG+GA G NGG GG LYGNGGNG S Sbjct 121 LIGDGAAG-TAANPNGGAGGFLYGNGGNGFS 150 >gi|57116865|ref|YP_177812.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv] gi|7441217|pir||E70917 hypothetical glycine-rich protein Rv1450c - Mycobacterium tuberculosis (strain H37RV) gi|38490271|emb|CAE55390.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv] Length=1329 Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 75/122 (62%), Positives = 93/122 (77%), Gaps = 3/122 (2%) Query 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 MS ++V PE VAAAA D+A IGSSI AANAAAA TT+++AAG DEVSAAIA LFG+HAR Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQ---SVQQDLLNLINAPTQALLGRP 117 YQA+S Q A FH++F + L+A SY AEA A +++ ++LN +NAPTQALLGRP Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 118 LI 119 LI Sbjct 121 LI 122 >gi|339631131|ref|YP_004722773.1| PE-PGRS family protein [Mycobacterium africanum GM041182] gi|339330487|emb|CCC26152.1| PE-PGRS family protein [Mycobacterium africanum GM041182] Length=672 Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 93/148 (63%), Positives = 110/148 (75%), Gaps = 4/148 (2%) Query 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 MS+++V P + AAA D+A IGS+ISAANAAA APT+ L AAG DEVSAA+AALF AHA Sbjct 1 MSFVLVSPSQLMAAAADVAGIGSAISAANAAALAPTSVLAAAGADEVSAAVAALFSAHAG 60 Query 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG 120 YQ L A+AA+FHEQFV+AL G S + AT +V+Q +L LINAPTQAL GRPLIG Sbjct 61 QYQQLGARAALFHEQFVQAL-TGAASAYASAEAT--NVEQQVLGLINAPTQALWGRPLIG 117 Query 121 NGANGLPGTGQNGGDGGILYGNGGNGGS 148 NGA+G NGG GG+LY NGGNG S Sbjct 118 NGADGT-AANPNGGAGGLLYSNGGNGFS 144 >gi|148822669|ref|YP_001287423.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] gi|148721196|gb|ABR05821.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] gi|344219280|gb|AEM99910.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2] Length=1407 Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 75/122 (62%), Positives = 93/122 (77%), Gaps = 3/122 (2%) Query 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 MS ++V PE VAAAA D+A IGSSI AANAAAA TT+++AAG DEVSAAIA LFG+HAR Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQ---SVQQDLLNLINAPTQALLGRP 117 YQA+S Q A FH++F + L+A SY AEA A +++ ++LN +NAPTQALLGRP Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 118 LI 119 LI Sbjct 121 LI 122 >gi|148661242|ref|YP_001282765.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] gi|148505394|gb|ABQ73203.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] Length=1398 Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 75/122 (62%), Positives = 93/122 (77%), Gaps = 3/122 (2%) Query 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 MS ++V PE VAAAA D+A IGSSI AANAAAA TT+++AAG DEVSAAIA LFG+HAR Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQ---SVQQDLLNLINAPTQALLGRP 117 YQA+S Q A FH++F + L+A SY AEA A +++ ++LN +NAPTQALLGRP Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 118 LI 119 LI Sbjct 121 LI 122 >gi|183980507|ref|YP_001848798.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183173833|gb|ACC38943.1| PE-PGRS family protein [Mycobacterium marinum M] Length=675 Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 91/140 (65%), Positives = 109/140 (78%), Gaps = 3/140 (2%) Query 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 MS++ V+PE + AAAT+LA +GS+IS ANA AA PT A +AAG D+VSAA+++ FGA+AR Sbjct 1 MSFVSVIPEQLTAAATNLAGVGSTISTANATAAGPTAAALAAGADDVSAAVSSFFGAYAR 60 Query 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRPLIG 120 YQA S Q H+QFVRA+ +G SYA AEA SVQQ LL+ INAPTQALLGRPLIG Sbjct 61 DYQAFSVQVEALHDQFVRAVTSGAASYAGAEAT---SVQQILLDAINAPTQALLGRPLIG 117 Query 121 NGANGLPGTGQNGGDGGILY 140 NGAN PG+G NGGDGGILY Sbjct 118 NGANAAPGSGANGGDGGILY 137 >gi|340626105|ref|YP_004744557.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] gi|340004295|emb|CCC43436.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] Length=856 Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 75/127 (60%), Positives = 93/127 (74%), Gaps = 3/127 (2%) Query 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 MS+++ PE + A A+DLA IGS+++ ANAA APTT L+AAG DEVS+AIAALFGAH + Sbjct 1 MSFVIAAPEALVAVASDLAGIGSALAEANAAVLAPTTGLLAAGADEVSSAIAALFGAHGQ 60 Query 61 AYQALSAQAAMFHEQFVR---ALAAGGNSYAVAEAATAQSVQQDLLNLINAPTQALLGRP 117 AYQ +SAQA+ FH QFV+ + A + AQSV Q LL+LIN PTQALLGRP Sbjct 61 AYQTVSAQASAFHAQFVQALTGGGGAYAAAEAANVSAAQSVDQRLLDLINGPTQALLGRP 120 Query 118 LIGNGAN 124 LIG+GAN Sbjct 121 LIGDGAN 127 >gi|148661609|ref|YP_001283132.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] gi|148823017|ref|YP_001287771.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] gi|253799155|ref|YP_003032156.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435] 22 more sequence titles Length=650 Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 76/128 (60%), Positives = 90/128 (71%), Gaps = 3/128 (2%) Query 2 SYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHARA 61 S ++V P V AAA DLA IGS+IS ANA A P TAL+ AG D+VSAAIAALF H +A Sbjct 15 SQMIVAPAFVDAAAKDLATIGSAISRANAEALVPITALLPAGADDVSAAIAALFATHGQA 74 Query 62 YQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQ---QDLLNLINAPTQALLGRPL 118 YQ LSA A FHEQFV+ ++AG YA AEAA + +Q Q L+ IN+P Q L GRPL Sbjct 75 YQELSAHAVAFHEQFVQLMSAGAAQYASAEAANSSPLQIVGQTALDAINSPVQTLTGRPL 134 Query 119 IGNGANGL 126 IGNGANG+ Sbjct 135 IGNGANGV 142 >gi|289443277|ref|ZP_06433021.1| PE-PGRS family protein [Mycobacterium tuberculosis T46] gi|289569875|ref|ZP_06450102.1| PE-PGRS family protein [Mycobacterium tuberculosis T17] gi|289753898|ref|ZP_06513276.1| predicted protein [Mycobacterium tuberculosis EAS054] gi|289416196|gb|EFD13436.1| PE-PGRS family protein [Mycobacterium tuberculosis T46] gi|289543629|gb|EFD47277.1| PE-PGRS family protein [Mycobacterium tuberculosis T17] gi|289694485|gb|EFD61914.1| predicted protein [Mycobacterium tuberculosis EAS054] Length=639 Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 76/128 (60%), Positives = 90/128 (71%), Gaps = 3/128 (2%) Query 2 SYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHARA 61 S ++V P V AAA DLA IGS+IS ANA A P TAL+ AG D+VSAAIAALF H +A Sbjct 4 SQMIVAPAFVDAAAKDLATIGSAISRANAEALVPITALLPAGADDVSAAIAALFATHGQA 63 Query 62 YQALSAQAAMFHEQFVRALAAGGNSYAVAEAATAQSVQ---QDLLNLINAPTQALLGRPL 118 YQ LSA A FHEQFV+ ++AG YA AEAA + +Q Q L+ IN+P Q L GRPL Sbjct 64 YQELSAHAVAFHEQFVQLMSAGAAQYASAEAANSSPLQIVGQTALDAINSPVQTLTGRPL 123 Query 119 IGNGANGL 126 IGNGANG+ Sbjct 124 IGNGANGV 131 Lambda K H 0.309 0.142 0.435 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1414276709120 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40