BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1786 Length=67 Score E Sequences producing significant alignments: (Bits) Value gi|15608924|ref|NP_216302.1| ferredoxin [Mycobacterium tuberculo... 135 2e-30 gi|340626798|ref|YP_004745250.1| putative ferredoxin [Mycobacter... 133 8e-30 gi|240172019|ref|ZP_04750678.1| ferredoxin [Mycobacterium kansas... 114 6e-24 gi|41407602|ref|NP_960438.1| hypothetical protein MAP1504 [Mycob... 113 9e-24 gi|118465392|ref|YP_881783.1| hypothetical protein MAV_2592 [Myc... 110 6e-23 gi|342861312|ref|ZP_08717960.1| hypothetical protein MCOL_20611 ... 109 1e-22 gi|118618473|ref|YP_906805.1| ferredoxin [Mycobacterium ulcerans... 109 1e-22 gi|118466163|ref|YP_881096.1| hypothetical protein MAV_1876 [Myc... 108 2e-22 gi|126436671|ref|YP_001072362.1| hypothetical protein Mjls_4098 ... 108 3e-22 gi|296164777|ref|ZP_06847339.1| conserved hypothetical protein [... 107 4e-22 gi|254820289|ref|ZP_05225290.1| hypothetical protein MintA_10191... 107 7e-22 gi|118462574|ref|YP_882115.1| hypothetical protein MAV_2929 [Myc... 99.4 1e-19 gi|342857659|ref|ZP_08714315.1| putative ferredoxin [Mycobacteri... 94.0 6e-18 gi|158316357|ref|YP_001508865.1| hypothetical protein Franean1_4... 58.2 4e-07 gi|118466306|ref|YP_881168.1| hypothetical protein MAV_1949 [Myc... 56.2 2e-06 gi|72161679|ref|YP_289336.1| hypothetical protein Tfu_1275 [Ther... 54.3 6e-06 gi|240171227|ref|ZP_04749886.1| hypothetical protein MkanA1_1808... 53.9 8e-06 gi|126436294|ref|YP_001071985.1| ferredoxin 1 [Mycobacterium sp.... 52.8 2e-05 gi|111222311|ref|YP_713105.1| hypothetical protein FRAAL2893 [Fr... 52.8 2e-05 gi|325674823|ref|ZP_08154510.1| ferredoxin Fas2 [Rhodococcus equ... 52.8 2e-05 gi|108800644|ref|YP_640841.1| hypothetical protein Mmcs_3679 [My... 52.8 2e-05 gi|296166381|ref|ZP_06848816.1| ferredoxin 1 [Mycobacterium para... 52.4 2e-05 gi|108800670|ref|YP_640867.1| ferredoxin 1 [Mycobacterium sp. MC... 52.4 2e-05 gi|333992375|ref|YP_004524989.1| ferredoxin [Mycobacterium sp. J... 52.4 2e-05 gi|111223234|ref|YP_714028.1| putative ferredoxin [Frankia alni ... 50.8 6e-05 gi|111222811|ref|YP_713605.1| hypothetical protein FRAAL3396 [Fr... 50.4 8e-05 gi|226349950|ref|YP_002777063.1| 3Fe-4S ferredoxin [Rhodococcus ... 50.1 1e-04 gi|15865466|emb|CAC81337.1| putative ferredoxin [Pseudomonas sp.... 49.3 2e-04 gi|334344632|ref|YP_004553184.1| hypothetical protein Sphch_0987... 48.5 3e-04 gi|300789003|ref|YP_003769294.1| ferredoxin [Amycolatopsis medit... 48.5 3e-04 gi|4455071|gb|AAD21062.1| dioxygenase DitA ferredoxin component ... 48.5 3e-04 gi|119952503|ref|YP_949941.1| ferredoxin [Arthrobacter aurescens... 48.1 4e-04 gi|118616185|ref|YP_904517.1| ferredoxin [Mycobacterium ulcerans... 48.1 4e-04 gi|342857421|ref|ZP_08714077.1| hypothetical protein MCOL_01055 ... 48.1 5e-04 gi|240170403|ref|ZP_04749062.1| ferredoxin [Mycobacterium kansas... 47.8 5e-04 gi|158318575|ref|YP_001511083.1| hypothetical protein Franean1_6... 47.8 6e-04 gi|119717039|ref|YP_924004.1| hypothetical protein Noca_2815 [No... 47.4 6e-04 gi|291441648|ref|ZP_06581038.1| predicted protein [Streptomyces ... 47.4 8e-04 gi|159038784|ref|YP_001538037.1| putative ferredoxin [Salinispor... 47.0 0.001 gi|326955308|gb|AEA29002.1| phthalate 3,4-dioxygenase ferredoxin... 46.6 0.001 gi|254818322|ref|ZP_05223323.1| hypothetical protein MintA_00260... 46.6 0.001 gi|319785424|ref|YP_004144900.1| hypothetical protein Mesci_5827... 46.6 0.001 gi|85716665|ref|ZP_01047634.1| probable Ferredoxin [Nitrobacter ... 46.6 0.001 gi|333992139|ref|YP_004524753.1| ferredoxin [Mycobacterium sp. J... 46.2 0.002 gi|288919165|ref|ZP_06413503.1| ferredoxin [Frankia sp. EUN1f] >... 46.2 0.002 gi|20804160|emb|CAD31363.1| PUTATIVE FERREDOXIN PROTEIN [Mesorhi... 46.2 0.002 gi|296169572|ref|ZP_06851192.1| conserved hypothetical protein [... 46.2 0.002 gi|118468913|ref|YP_889078.1| hypothetical protein MSMEG_4822 [M... 45.8 0.002 gi|120405113|ref|YP_954942.1| hypothetical protein Mvan_4159 [My... 45.8 0.002 gi|28394151|dbj|BAC57024.1| ferredxin [Micromonospora griseorubida] 45.8 0.002 >gi|15608924|ref|NP_216302.1| ferredoxin [Mycobacterium tuberculosis H37Rv] gi|15841254|ref|NP_336291.1| ferredoxin, putative [Mycobacterium tuberculosis CDC1551] gi|31792974|ref|NP_855467.1| putative ferredoxin [Mycobacterium bovis AF2122/97] 76 more sequence titles Length=67 Score = 135 bits (340), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 66/67 (99%), Positives = 67/67 (100%), Gaps = 0/67 (0%) Query 1 VKVRLDPSRCVGHAQCYAVDPDLFPIDDSGNSILAEHEVRPEDMQLTRDGVAACPEMALI 60 +KVRLDPSRCVGHAQCYAVDPDLFPIDDSGNSILAEHEVRPEDMQLTRDGVAACPEMALI Sbjct 1 MKVRLDPSRCVGHAQCYAVDPDLFPIDDSGNSILAEHEVRPEDMQLTRDGVAACPEMALI 60 Query 61 LEEDDAD 67 LEEDDAD Sbjct 61 LEEDDAD 67 >gi|340626798|ref|YP_004745250.1| putative ferredoxin [Mycobacterium canettii CIPT 140010059] gi|340004988|emb|CCC44136.1| putative ferredoxin [Mycobacterium canettii CIPT 140010059] Length=67 Score = 133 bits (335), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 65/67 (98%), Positives = 66/67 (99%), Gaps = 0/67 (0%) Query 1 VKVRLDPSRCVGHAQCYAVDPDLFPIDDSGNSILAEHEVRPEDMQLTRDGVAACPEMALI 60 +KVRLDPSRCVGHAQCYAVDPDLFPIDDSGNSILAEHEVRP DMQLTRDGVAACPEMALI Sbjct 1 MKVRLDPSRCVGHAQCYAVDPDLFPIDDSGNSILAEHEVRPADMQLTRDGVAACPEMALI 60 Query 61 LEEDDAD 67 LEEDDAD Sbjct 61 LEEDDAD 67 >gi|240172019|ref|ZP_04750678.1| ferredoxin [Mycobacterium kansasii ATCC 12478] Length=64 Score = 114 bits (284), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 54/64 (85%), Positives = 60/64 (94%), Gaps = 0/64 (0%) Query 1 VKVRLDPSRCVGHAQCYAVDPDLFPIDDSGNSILAEHEVRPEDMQLTRDGVAACPEMALI 60 +KVRL+ SRCVGHAQCYAVDP+LFPID+SG SIL EH+VRPED QLTRDGVAACPEMALI Sbjct 1 MKVRLERSRCVGHAQCYAVDPELFPIDESGYSILEEHQVRPEDAQLTRDGVAACPEMALI 60 Query 61 LEED 64 L+ED Sbjct 61 LDED 64 >gi|41407602|ref|NP_960438.1| hypothetical protein MAP1504 [Mycobacterium avium subsp. paratuberculosis K-10] gi|254775404|ref|ZP_05216920.1| hypothetical protein MaviaA2_12146 [Mycobacterium avium subsp. avium ATCC 25291] gi|41395955|gb|AAS03821.1| hypothetical protein MAP_1504 [Mycobacterium avium subsp. paratuberculosis K-10] gi|336457650|gb|EGO36654.1| ferredoxin [Mycobacterium avium subsp. paratuberculosis S397] Length=64 Score = 113 bits (283), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 53/64 (83%), Positives = 60/64 (94%), Gaps = 0/64 (0%) Query 1 VKVRLDPSRCVGHAQCYAVDPDLFPIDDSGNSILAEHEVRPEDMQLTRDGVAACPEMALI 60 ++VRL+ S+CVGHAQCYAVDPDLFPID+SG SILAEHEV+PED Q TRDGVA+CPEMALI Sbjct 1 MRVRLEQSKCVGHAQCYAVDPDLFPIDESGYSILAEHEVKPEDEQATRDGVASCPEMALI 60 Query 61 LEED 64 LEED Sbjct 61 LEED 64 >gi|118465392|ref|YP_881783.1| hypothetical protein MAV_2592 [Mycobacterium avium 104] gi|254819999|ref|ZP_05225000.1| hypothetical protein MintA_08741 [Mycobacterium intracellulare ATCC 13950] gi|118166679|gb|ABK67576.1| conserved hypothetical protein [Mycobacterium avium 104] Length=64 Score = 110 bits (276), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 53/63 (85%), Positives = 58/63 (93%), Gaps = 0/63 (0%) Query 1 VKVRLDPSRCVGHAQCYAVDPDLFPIDDSGNSILAEHEVRPEDMQLTRDGVAACPEMALI 60 +KVRL+ S+CVGHAQCYAVDPDLFPIDDSG SIL E EVRPED QLTRDGVAACPE+ALI Sbjct 1 MKVRLEQSKCVGHAQCYAVDPDLFPIDDSGYSILGEREVRPEDEQLTRDGVAACPELALI 60 Query 61 LEE 63 LE+ Sbjct 61 LED 63 >gi|342861312|ref|ZP_08717960.1| hypothetical protein MCOL_20611 [Mycobacterium colombiense CECT 3035] gi|342131212|gb|EGT84493.1| hypothetical protein MCOL_20611 [Mycobacterium colombiense CECT 3035] Length=64 Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 51/64 (80%), Positives = 59/64 (93%), Gaps = 0/64 (0%) Query 1 VKVRLDPSRCVGHAQCYAVDPDLFPIDDSGNSILAEHEVRPEDMQLTRDGVAACPEMALI 60 ++VRL+ S+CVGHAQCYAVDPDLFPID+SG S+L EHEV PED QLTRDGVA+CPEMALI Sbjct 1 MRVRLEQSKCVGHAQCYAVDPDLFPIDESGYSVLEEHEVAPEDEQLTRDGVASCPEMALI 60 Query 61 LEED 64 L+ED Sbjct 61 LDED 64 >gi|118618473|ref|YP_906805.1| ferredoxin [Mycobacterium ulcerans Agy99] gi|183982674|ref|YP_001850965.1| ferredoxin [Mycobacterium marinum M] gi|118570583|gb|ABL05334.1| ferredoxin [Mycobacterium ulcerans Agy99] gi|183176000|gb|ACC41110.1| ferredoxin [Mycobacterium marinum M] Length=64 Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 50/64 (79%), Positives = 59/64 (93%), Gaps = 0/64 (0%) Query 1 VKVRLDPSRCVGHAQCYAVDPDLFPIDDSGNSILAEHEVRPEDMQLTRDGVAACPEMALI 60 +K+RL+ S+CVGHAQCYAVDPDLFPID+SG SIL EHEVRPED Q+ RDGVA+CPEMALI Sbjct 1 MKIRLESSKCVGHAQCYAVDPDLFPIDESGYSILEEHEVRPEDEQVARDGVASCPEMALI 60 Query 61 LEED 64 L+E+ Sbjct 61 LDEE 64 >gi|118466163|ref|YP_881096.1| hypothetical protein MAV_1876 [Mycobacterium avium 104] gi|118167450|gb|ABK68347.1| conserved hypothetical protein [Mycobacterium avium 104] Length=64 Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 52/64 (82%), Positives = 57/64 (90%), Gaps = 0/64 (0%) Query 1 VKVRLDPSRCVGHAQCYAVDPDLFPIDDSGNSILAEHEVRPEDMQLTRDGVAACPEMALI 60 +KVRL+ S+CVGHAQCYAVDPDLFPIDDSG SIL HEV+P D Q TRDGVAACPE+ALI Sbjct 1 MKVRLEQSKCVGHAQCYAVDPDLFPIDDSGYSILEAHEVKPGDEQKTRDGVAACPELALI 60 Query 61 LEED 64 LEED Sbjct 61 LEED 64 >gi|126436671|ref|YP_001072362.1| hypothetical protein Mjls_4098 [Mycobacterium sp. JLS] gi|126236471|gb|ABN99871.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=64 Score = 108 bits (270), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 51/64 (80%), Positives = 58/64 (91%), Gaps = 0/64 (0%) Query 1 VKVRLDPSRCVGHAQCYAVDPDLFPIDDSGNSILAEHEVRPEDMQLTRDGVAACPEMALI 60 ++VRL+ S+CVGHAQCYAVDP+LFPIDDSG IL E EVRPED QLTRDGVAACPE+AL+ Sbjct 1 MRVRLEQSKCVGHAQCYAVDPELFPIDDSGYCILEEREVRPEDEQLTRDGVAACPELALV 60 Query 61 LEED 64 LEED Sbjct 61 LEED 64 >gi|296164777|ref|ZP_06847339.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295899878|gb|EFG79322.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=64 Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 49/64 (77%), Positives = 58/64 (91%), Gaps = 0/64 (0%) Query 1 VKVRLDPSRCVGHAQCYAVDPDLFPIDDSGNSILAEHEVRPEDMQLTRDGVAACPEMALI 60 ++VRL+ S+CVGHAQCYAVDP+LFPIDDSG S L EHEVRP D Q+TRDGVA+CPEMAL+ Sbjct 1 MRVRLEKSKCVGHAQCYAVDPELFPIDDSGYSTLEEHEVRPGDEQVTRDGVASCPEMALV 60 Query 61 LEED 64 +EED Sbjct 61 IEED 64 >gi|254820289|ref|ZP_05225290.1| hypothetical protein MintA_10191 [Mycobacterium intracellulare ATCC 13950] Length=64 Score = 107 bits (266), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 50/64 (79%), Positives = 59/64 (93%), Gaps = 0/64 (0%) Query 1 VKVRLDPSRCVGHAQCYAVDPDLFPIDDSGNSILAEHEVRPEDMQLTRDGVAACPEMALI 60 ++VRL+ S+CVGHAQCYAVDPDLFPID+SG SIL E +VRPED Q+TRDGVA+CPEMALI Sbjct 1 MRVRLEQSKCVGHAQCYAVDPDLFPIDESGYSILQERDVRPEDEQVTRDGVASCPEMALI 60 Query 61 LEED 64 L+ED Sbjct 61 LDED 64 >gi|118462574|ref|YP_882115.1| hypothetical protein MAV_2929 [Mycobacterium avium 104] gi|118163861|gb|ABK64758.1| conserved hypothetical protein [Mycobacterium avium 104] Length=54 Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 47/54 (88%), Positives = 51/54 (95%), Gaps = 0/54 (0%) Query 11 VGHAQCYAVDPDLFPIDDSGNSILAEHEVRPEDMQLTRDGVAACPEMALILEED 64 +GHAQCYAVDPDLFPID+SG SILAEHEV+PED Q TRDGVA+CPEMALILEED Sbjct 1 MGHAQCYAVDPDLFPIDESGYSILAEHEVKPEDEQATRDGVASCPEMALILEED 54 >gi|342857659|ref|ZP_08714315.1| putative ferredoxin [Mycobacterium colombiense CECT 3035] gi|342134992|gb|EGT88158.1| putative ferredoxin [Mycobacterium colombiense CECT 3035] Length=65 Score = 94.0 bits (232), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 43/65 (67%), Positives = 55/65 (85%), Gaps = 0/65 (0%) Query 1 VKVRLDPSRCVGHAQCYAVDPDLFPIDDSGNSILAEHEVRPEDMQLTRDGVAACPEMALI 60 +KV +D S+C+GHAQCYA++PDLFPIDD+G S L +EV+P+ +QL R+GVAACPE ALI Sbjct 1 MKVSVDNSKCMGHAQCYAINPDLFPIDDAGYSNLKPYEVQPDQVQLVREGVAACPERALI 60 Query 61 LEEDD 65 LE DD Sbjct 61 LEGDD 65 >gi|158316357|ref|YP_001508865.1| hypothetical protein Franean1_4586 [Frankia sp. EAN1pec] gi|158111762|gb|ABW13959.1| conserved hypothetical protein [Frankia sp. EAN1pec] Length=62 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 26/62 (42%), Positives = 38/62 (62%), Gaps = 0/62 (0%) Query 1 VKVRLDPSRCVGHAQCYAVDPDLFPIDDSGNSILAEHEVRPEDMQLTRDGVAACPEMALI 60 ++V +D +C GHA+CY DPDLF IDD G ++ E EV + R+ A+CPE A+ Sbjct 1 MRVTIDMDKCSGHARCYGTDPDLFQIDDIGYALRPEFEVPAGGEETAREAAASCPERAIT 60 Query 61 LE 62 + Sbjct 61 AQ 62 >gi|118466306|ref|YP_881168.1| hypothetical protein MAV_1949 [Mycobacterium avium 104] gi|118167593|gb|ABK68490.1| conserved domain protein [Mycobacterium avium 104] Length=64 Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 25/64 (40%), Positives = 41/64 (65%), Gaps = 1/64 (1%) Query 1 VKVRLDPSRCVGHAQCYAVDPDLFPIDDSG-NSILAEHEVRPEDMQLTRDGVAACPEMAL 59 ++V +DP++C+GH CYA+ P++F DD G ++ + EV E + R+G A CPE A+ Sbjct 1 MRVAIDPAKCMGHGICYALAPNVFEDDDQGYGHVIGDGEVPQEQAEAARNGAANCPEGAI 60 Query 60 ILEE 63 + E Sbjct 61 SVTE 64 >gi|72161679|ref|YP_289336.1| hypothetical protein Tfu_1275 [Thermobifida fusca YX] gi|71915411|gb|AAZ55313.1| conserved hypothetical protein [Thermobifida fusca YX] Length=63 Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 26/63 (42%), Positives = 38/63 (61%), Gaps = 1/63 (1%) Query 1 VKVRLDPSRCVGHAQCYAVDPDLF-PIDDSGNSILAEHEVRPEDMQLTRDGVAACPEMAL 59 ++VR+D +C GH CY PD+F P ++ G++ + EV PE RDG ACPE A+ Sbjct 1 MRVRVDGKQCQGHGVCYMTAPDVFAPREEDGHAYVLHEEVGPELEAAARDGAEACPERAI 60 Query 60 ILE 62 +E Sbjct 61 TVE 63 >gi|240171227|ref|ZP_04749886.1| hypothetical protein MkanA1_18081 [Mycobacterium kansasii ATCC 12478] Length=64 Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 25/61 (41%), Positives = 35/61 (58%), Gaps = 0/61 (0%) Query 1 VKVRLDPSRCVGHAQCYAVDPDLFPIDDSGNSILAEHEVRPEDMQLTRDGVAACPEMALI 60 +V +DP RC GH +CY + P +F D+ G+SI+ EV E +L G CPE A+ Sbjct 2 TRVSVDPDRCTGHGRCYTLAPGVFDADEVGHSIVRVAEVSGELERLAVTGAENCPERAIT 61 Query 61 L 61 L Sbjct 62 L 62 >gi|126436294|ref|YP_001071985.1| ferredoxin 1 [Mycobacterium sp. JLS] gi|126236094|gb|ABN99494.1| ferredoxin 1 [Mycobacterium sp. JLS] Length=63 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 26/60 (44%), Positives = 34/60 (57%), Gaps = 0/60 (0%) Query 1 VKVRLDPSRCVGHAQCYAVDPDLFPIDDSGNSILAEHEVRPEDMQLTRDGVAACPEMALI 60 +KVR+D RC GH C + PD+F + D G ++ EV E RD VA CPE A+I Sbjct 1 MKVRVDEDRCAGHGMCLTLCPDMFEMTDDGWAVADPEEVPAELESAARDAVANCPERAII 60 >gi|111222311|ref|YP_713105.1| hypothetical protein FRAAL2893 [Frankia alni ACN14a] gi|111149843|emb|CAJ61537.1| conserved hypothetical protein [Frankia alni ACN14a] Length=61 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 27/57 (48%), Positives = 34/57 (60%), Gaps = 0/57 (0%) Query 5 LDPSRCVGHAQCYAVDPDLFPIDDSGNSILAEHEVRPEDMQLTRDGVAACPEMALIL 61 +D C GHA+C A DLFP+DD G + + E+ P + RD VAACPE AL L Sbjct 2 VDTGLCSGHARCNATAEDLFPLDDLGYLAVTDPEIPPGQERRARDAVAACPERALSL 58 >gi|325674823|ref|ZP_08154510.1| ferredoxin Fas2 [Rhodococcus equi ATCC 33707] gi|325554409|gb|EGD24084.1| ferredoxin Fas2 [Rhodococcus equi ATCC 33707] Length=64 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 23/60 (39%), Positives = 34/60 (57%), Gaps = 0/60 (0%) Query 3 VRLDPSRCVGHAQCYAVDPDLFPIDDSGNSILAEHEVRPEDMQLTRDGVAACPEMALILE 62 +++D S+C G+A C PD F + D+G +L EV P+ + GV +CP AL LE Sbjct 4 IKVDLSKCQGYANCVVTSPDAFDLGDNGKVVLLTREVTPDQLAEVEKGVRSCPAAALSLE 63 >gi|108800644|ref|YP_640841.1| hypothetical protein Mmcs_3679 [Mycobacterium sp. MCS] gi|119869783|ref|YP_939735.1| hypothetical protein Mkms_3752 [Mycobacterium sp. KMS] gi|126436268|ref|YP_001071959.1| hypothetical protein Mjls_3692 [Mycobacterium sp. JLS] gi|108771063|gb|ABG09785.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119695872|gb|ABL92945.1| conserved hypothetical protein [Mycobacterium sp. KMS] gi|126236068|gb|ABN99468.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=65 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 1/65 (1%) Query 1 VKVRLDPSRCVGHAQCYAVDPDLFPIDDSGNSILAEHEVRPEDMQ-LTRDGVAACPEMAL 59 +KVR+DP RC GH C + PD F + D + +EV P+D Q R+ ++CPE A+ Sbjct 1 MKVRVDPDRCQGHTLCSMIAPDSFVLSDIDGTASPVNEVVPDDQQNAVREAASSCPEQAI 60 Query 60 ILEED 64 +E+D Sbjct 61 SIEDD 65 >gi|296166381|ref|ZP_06848816.1| ferredoxin 1 [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898291|gb|EFG77862.1| ferredoxin 1 [Mycobacterium parascrofulaceum ATCC BAA-614] Length=66 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 22/59 (38%), Positives = 37/59 (63%), Gaps = 0/59 (0%) Query 1 VKVRLDPSRCVGHAQCYAVDPDLFPIDDSGNSILAEHEVRPEDMQLTRDGVAACPEMAL 59 +K+R+D C GH++CYA P++F IDD G +++ ++ PE + +A CPE A+ Sbjct 1 MKLRVDAELCQGHSRCYAAYPEMFDIDDDGTAVVTVGDIPPEWEDRAHNAIANCPERAI 59 >gi|108800670|ref|YP_640867.1| ferredoxin 1 [Mycobacterium sp. MCS] gi|119869809|ref|YP_939761.1| ferredoxin 1 [Mycobacterium sp. KMS] gi|108771089|gb|ABG09811.1| Ferredoxin 1 [Mycobacterium sp. MCS] gi|119695898|gb|ABL92971.1| ferredoxin 1 [Mycobacterium sp. KMS] Length=63 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 26/60 (44%), Positives = 34/60 (57%), Gaps = 0/60 (0%) Query 1 VKVRLDPSRCVGHAQCYAVDPDLFPIDDSGNSILAEHEVRPEDMQLTRDGVAACPEMALI 60 +KVR+D RC GH C + PD+F + D G ++ EV E RD VA CPE A+I Sbjct 1 MKVRVDEDRCAGHGMCLTLCPDVFEMTDDGWAVADPEEVPAELESAARDAVANCPERAII 60 >gi|333992375|ref|YP_004524989.1| ferredoxin [Mycobacterium sp. JDM601] gi|333488343|gb|AEF37735.1| ferredoxin [Mycobacterium sp. JDM601] Length=63 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 23/63 (37%), Positives = 35/63 (56%), Gaps = 0/63 (0%) Query 1 VKVRLDPSRCVGHAQCYAVDPDLFPIDDSGNSILAEHEVRPEDMQLTRDGVAACPEMALI 60 +KV +D RC+GH QCY PD++ DD G ++ E+ + + G ACPE A+ Sbjct 1 MKVSVDSGRCMGHGQCYTWGPDVYQPDDQGYCVVPVAEITGDLAEQAIAGAEACPESAIT 60 Query 61 LEE 63 + E Sbjct 61 ISE 63 >gi|111223234|ref|YP_714028.1| putative ferredoxin [Frankia alni ACN14a] gi|111150766|emb|CAJ62468.1| Putative ferredoxin (partial) [Frankia alni ACN14a] Length=64 Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 23/62 (38%), Positives = 39/62 (63%), Gaps = 0/62 (0%) Query 1 VKVRLDPSRCVGHAQCYAVDPDLFPIDDSGNSILAEHEVRPEDMQLTRDGVAACPEMALI 60 +++ +D +RC GH +CY + P+LF DDSG + +V + ++L R ACPE A++ Sbjct 1 MRLTIDTARCQGHGRCYDLAPELFTDDDSGYGEVTVADVPADRVELARRAAEACPERAVL 60 Query 61 LE 62 L+ Sbjct 61 LD 62 >gi|111222811|ref|YP_713605.1| hypothetical protein FRAAL3396 [Frankia alni ACN14a] gi|111150343|emb|CAJ62040.1| hypothetical protein; Putative ferredoxin domain [Frankia alni ACN14a] Length=65 Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 24/65 (37%), Positives = 38/65 (59%), Gaps = 1/65 (1%) Query 1 VKVRLDPSRCVGHAQCYAVDPDLFPIDDSGNSILAEHEVRPEDMQ-LTRDGVAACPEMAL 59 +++ ++ C GH QCY V+P+L+P+DD G + L P + R GVAACP+ A+ Sbjct 1 MRIHMEQQECSGHGQCYLVNPELYPLDDDGFTALNGDVAVPAGAEDDARRGVAACPQQAI 60 Query 60 ILEED 64 + D Sbjct 61 SVLAD 65 >gi|226349950|ref|YP_002777063.1| 3Fe-4S ferredoxin [Rhodococcus opacus B4] gi|226245865|dbj|BAH47132.1| 3Fe-4S ferredoxin [Rhodococcus opacus B4] Length=64 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 24/64 (38%), Positives = 37/64 (58%), Gaps = 0/64 (0%) Query 1 VKVRLDPSRCVGHAQCYAVDPDLFPIDDSGNSILAEHEVRPEDMQLTRDGVAACPEMALI 60 +KV +D ++C C A+ P F + D G+ +L +V ++ +L VAACP ALI Sbjct 1 MKVVVDRAKCTALGNCEAIAPTYFEVGDEGDLLLLREDVPEDERELVEKAVAACPTAALI 60 Query 61 LEED 64 LE+D Sbjct 61 LEQD 64 >gi|15865466|emb|CAC81337.1| putative ferredoxin [Pseudomonas sp. KIE171] Length=64 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 25/61 (41%), Positives = 39/61 (64%), Gaps = 2/61 (3%) Query 1 VKVRLDPSRCVGHAQCYAVDPDLFPIDDSGNS-ILAEHEVRPEDMQLT-RDGVAACPEMA 58 +KV +D +RC GHA+C P++F IDD G S + A +E P ++Q + + A CPE+A Sbjct 1 MKVTVDNNRCQGHARCVYFAPEVFEIDDEGYSRVKAGYETVPVELQESVKKACANCPELA 60 Query 59 L 59 + Sbjct 61 I 61 >gi|334344632|ref|YP_004553184.1| hypothetical protein Sphch_0987 [Sphingobium chlorophenolicum L-1] gi|334101254|gb|AEG48678.1| protein of unknown function DUF1271 [Sphingobium chlorophenolicum L-1] Length=63 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 23/63 (37%), Positives = 37/63 (59%), Gaps = 0/63 (0%) Query 1 VKVRLDPSRCVGHAQCYAVDPDLFPIDDSGNSILAEHEVRPEDMQLTRDGVAACPEMALI 60 +K+ + +C GHA+C+A+ P +F +DD G + EV D +L G +CPE AL Sbjct 1 MKIIVHNDKCQGHARCWAMAPHIFDLDDEGYIKPGDIEVAEADEKLAWKGAKSCPERALE 60 Query 61 LEE 63 +E+ Sbjct 61 IEK 63 >gi|300789003|ref|YP_003769294.1| ferredoxin [Amycolatopsis mediterranei U32] gi|299798517|gb|ADJ48892.1| ferredoxin [Amycolatopsis mediterranei U32] gi|340530635|gb|AEK45840.1| ferredoxin [Amycolatopsis mediterranei S699] Length=62 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 22/62 (36%), Positives = 37/62 (60%), Gaps = 0/62 (0%) Query 1 VKVRLDPSRCVGHAQCYAVDPDLFPIDDSGNSILAEHEVRPEDMQLTRDGVAACPEMALI 60 +K+ +D C GHA+C A P++F +DD+G ++ + EV + R+G ACPE A+ Sbjct 1 MKITIDTGLCSGHARCAATAPEVFELDDNGYALPFDGEVPAALEEKAREGAFACPERAIT 60 Query 61 LE 62 + Sbjct 61 AQ 62 >gi|4455071|gb|AAD21062.1| dioxygenase DitA ferredoxin component [Pseudomonas abietaniphila] Length=78 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 27/62 (44%), Positives = 34/62 (55%), Gaps = 0/62 (0%) Query 1 VKVRLDPSRCVGHAQCYAVDPDLFPIDDSGNSILAEHEVRPEDMQLTRDGVAACPEMALI 60 KV D SRC G+ C AV P ++ +DD G L + V PE R+G AACP A+ Sbjct 8 FKVVADRSRCCGYGLCAAVCPSIYKLDDDGLVYLDDDRVPPELEDEAREGAAACPAEAIW 67 Query 61 LE 62 LE Sbjct 68 LE 69 >gi|119952503|ref|YP_949941.1| ferredoxin [Arthrobacter aurescens TC1] gi|119951633|gb|ABM10543.1| Ferredoxin [Arthrobacter aurescens TC1] Length=68 Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 26/66 (40%), Positives = 39/66 (60%), Gaps = 7/66 (10%) Query 2 KVRLDPSRCVGHAQCYAVDPDLFPIDDSGNSIL----AEHEVRPEDMQLTRDGVAACPEM 57 +V +DP++C GHA+C A PD+F DD G + + A+ E P ++L VA CPE Sbjct 3 RVSVDPAKCQGHARCLAFAPDVFDFDDEGYAFVPDDRAQFEELPNPVKL---AVANCPER 59 Query 58 ALILEE 63 A+ + E Sbjct 60 AISVSE 65 >gi|118616185|ref|YP_904517.1| ferredoxin [Mycobacterium ulcerans Agy99] gi|183984684|ref|YP_001852975.1| ferredoxin [Mycobacterium marinum M] gi|118568295|gb|ABL03046.1| ferredoxin [Mycobacterium ulcerans Agy99] gi|183178010|gb|ACC43120.1| ferredoxin [Mycobacterium marinum M] Length=66 Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 24/65 (37%), Positives = 35/65 (54%), Gaps = 1/65 (1%) Query 1 VKVRLDPSRCVGHAQCYAVDPDLFPIDDSGNSILAEHEVRPEDMQ-LTRDGVAACPEMAL 59 +KV +DP RC GH C + PD F + D S A E P D L R+ +CPE A+ Sbjct 1 MKVWVDPQRCQGHTLCAMIAPDSFQLSDIDGSSSAISETVPADQWDLVREAAHSCPEQAI 60 Query 60 ILEED 64 ++ ++ Sbjct 61 VITDE 65 >gi|342857421|ref|ZP_08714077.1| hypothetical protein MCOL_01055 [Mycobacterium colombiense CECT 3035] gi|342134754|gb|EGT87920.1| hypothetical protein MCOL_01055 [Mycobacterium colombiense CECT 3035] Length=65 Score = 48.1 bits (113), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 21/63 (34%), Positives = 36/63 (58%), Gaps = 0/63 (0%) Query 1 VKVRLDPSRCVGHAQCYAVDPDLFPIDDSGNSILAEHEVRPEDMQLTRDGVAACPEMALI 60 +K+ +D C GH++C+A P+LF IDD G + + + P + +A CPE A+ Sbjct 1 MKLHVDREMCQGHSRCHAAYPELFDIDDEGTAFVTVENIPPGWEDRAHNAIANCPERAIH 60 Query 61 LEE 63 ++E Sbjct 61 IKE 63 >gi|240170403|ref|ZP_04749062.1| ferredoxin [Mycobacterium kansasii ATCC 12478] Length=65 Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 24/62 (39%), Positives = 34/62 (55%), Gaps = 1/62 (1%) Query 1 VKVRLDPSRCVGHAQCYAVDPDLFPIDDSGNSILAEHEVRPEDMQ-LTRDGVAACPEMAL 59 +KV +DP RC GH C + PD F + D + A EV P D Q R+ +CPE A+ Sbjct 1 MKVWVDPERCQGHTLCAMIAPDSFRLSDIDGTSSAVSEVVPADQQDRVREAAQSCPEQAI 60 Query 60 IL 61 ++ Sbjct 61 VI 62 >gi|158318575|ref|YP_001511083.1| hypothetical protein Franean1_6843 [Frankia sp. EAN1pec] gi|158113980|gb|ABW16177.1| conserved hypothetical protein [Frankia sp. EAN1pec] Length=63 Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 20/61 (33%), Positives = 35/61 (58%), Gaps = 0/61 (0%) Query 1 VKVRLDPSRCVGHAQCYAVDPDLFPIDDSGNSILAEHEVRPEDMQLTRDGVAACPEMALI 60 +++ +DP RC GHA+C+ + P +F +D+ G+ + EV E + D CPE A+ Sbjct 1 MRIEVDPDRCEGHARCWDISPSVFELDEQGHGTVILPEVPAELAEQAADAARNCPERAIT 60 Query 61 L 61 + Sbjct 61 V 61 >gi|119717039|ref|YP_924004.1| hypothetical protein Noca_2815 [Nocardioides sp. JS614] gi|119537700|gb|ABL82317.1| conserved hypothetical protein [Nocardioides sp. JS614] Length=63 Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 24/63 (39%), Positives = 36/63 (58%), Gaps = 0/63 (0%) Query 1 VKVRLDPSRCVGHAQCYAVDPDLFPIDDSGNSILAEHEVRPEDMQLTRDGVAACPEMALI 60 +K+R+D C +A C A+ PD+F +DD L + PE++ + VAACP AL Sbjct 1 MKIRVDYDLCESNALCEALAPDVFELDDDDYLQLKTDQTTPENIDAVKRAVAACPRAALS 60 Query 61 LEE 63 LE+ Sbjct 61 LED 63 >gi|291441648|ref|ZP_06581038.1| predicted protein [Streptomyces ghanaensis ATCC 14672] gi|291344543|gb|EFE71499.1| predicted protein [Streptomyces ghanaensis ATCC 14672] Length=65 Score = 47.4 bits (111), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 23/62 (38%), Positives = 37/62 (60%), Gaps = 2/62 (3%) Query 2 KVRLDPSRCVGHAQCYAVDPDLFPIDDSGNSILAEHEVRPEDMQLTRDGVAACPEMALIL 61 K+ +D C GH +CY V PD+ D++G ++L E P D++ R A CPE A+++ Sbjct 4 KLEIDVPMCQGHGRCYEVAPDVLDADENGIAVLKSDE--PVDVERARAIAATCPEFAILV 61 Query 62 EE 63 +E Sbjct 62 KE 63 >gi|159038784|ref|YP_001538037.1| putative ferredoxin [Salinispora arenicola CNS-205] gi|157917619|gb|ABV99046.1| putative ferredoxin [Salinispora arenicola CNS-205] Length=64 Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust. Identities = 25/59 (43%), Positives = 28/59 (48%), Gaps = 0/59 (0%) Query 1 VKVRLDPSRCVGHAQCYAVDPDLFPIDDSGNSILAEHEVRPEDMQLTRDGVAACPEMAL 59 VKV +D RC G QC PD+F DD G L E RPE R ACP A+ Sbjct 2 VKVNVDRYRCYGLGQCVLAAPDVFDQDDDGIVWLLVEEARPEQHDEVRQAALACPRQAI 60 >gi|326955308|gb|AEA29002.1| phthalate 3,4-dioxygenase ferredoxin subunit [Pseudonocardia dioxanivorans CB1190] Length=66 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 25/62 (41%), Positives = 32/62 (52%), Gaps = 0/62 (0%) Query 2 KVRLDPSRCVGHAQCYAVDPDLFPIDDSGNSILAEHEVRPEDMQLTRDGVAACPEMALIL 61 VR D RC GHA C A PD+F +DD G + V + + VA+CP AL L Sbjct 4 SVRADAERCEGHANCLAAAPDVFGLDDDGVVRVLRVNVLDDQRVYVAEAVASCPVAALWL 63 Query 62 EE 63 +E Sbjct 64 DE 65 >gi|254818322|ref|ZP_05223323.1| hypothetical protein MintA_00260 [Mycobacterium intracellulare ATCC 13950] Length=65 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 25/65 (39%), Positives = 35/65 (54%), Gaps = 1/65 (1%) Query 1 VKVRLDPSRCVGHAQCYAVDPDLFPIDDSGNSILAEHEVRPEDMQ-LTRDGVAACPEMAL 59 +KV +D RC GH C + PD F + D S A EV P D + R+ +CPE A+ Sbjct 1 MKVWVDSQRCQGHTLCAMIAPDSFQLSDIDGSSSAIDEVVPADREDQVREAAQSCPEQAI 60 Query 60 ILEED 64 ++ ED Sbjct 61 MITED 65 >gi|319785424|ref|YP_004144900.1| hypothetical protein Mesci_5827 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317171312|gb|ADV14850.1| hypothetical protein Mesci_5827 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length=288 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 22/59 (38%), Positives = 37/59 (63%), Gaps = 0/59 (0%) Query 1 VKVRLDPSRCVGHAQCYAVDPDLFPIDDSGNSILAEHEVRPEDMQLTRDGVAACPEMAL 59 +++ + +RC GHAQC A P +F +D++G + + +V + L DGV +CPE+AL Sbjct 1 MRIIVHKARCQGHAQCSARAPAVFKLDEAGYILPGDIDVADGEQLLAADGVRSCPELAL 59 >gi|85716665|ref|ZP_01047634.1| probable Ferredoxin [Nitrobacter sp. Nb-311A] gi|85696505|gb|EAQ34394.1| probable Ferredoxin [Nitrobacter sp. Nb-311A] Length=69 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 20/65 (31%), Positives = 41/65 (64%), Gaps = 1/65 (1%) Query 1 VKVRLDPSRCVGHAQCYAVDPDLFPIDDSGNSILAEHEVRPEDMQ-LTRDGVAACPEMAL 59 +++ +DP +C GHA+C ++ P+LF +D+ GN+ + + P ++ A CPE+A+ Sbjct 5 LRIHVDPEKCQGHARCKSLAPELFELDELGNAQIIGNGAIPAGLEDKAWLAQANCPEIAI 64 Query 60 ILEED 64 +E++ Sbjct 65 TVEKE 69 >gi|333992139|ref|YP_004524753.1| ferredoxin [Mycobacterium sp. JDM601] gi|333488107|gb|AEF37499.1| ferredoxin [Mycobacterium sp. JDM601] Length=69 Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust. Identities = 22/59 (38%), Positives = 31/59 (53%), Gaps = 0/59 (0%) Query 1 VKVRLDPSRCVGHAQCYAVDPDLFPIDDSGNSILAEHEVRPEDMQLTRDGVAACPEMAL 59 +K +DP RC GH C + P++F I+D G S + EV RD + CPE A+ Sbjct 1 MKAWVDPDRCAGHGICTTICPEVFAINDDGYSEVTVDEVPAHLEDAVRDAIKQCPEHAI 59 >gi|288919165|ref|ZP_06413503.1| ferredoxin [Frankia sp. EUN1f] gi|288349412|gb|EFC83651.1| ferredoxin [Frankia sp. EUN1f] Length=62 Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust. Identities = 21/61 (35%), Positives = 36/61 (60%), Gaps = 0/61 (0%) Query 1 VKVRLDPSRCVGHAQCYAVDPDLFPIDDSGNSILAEHEVRPEDMQLTRDGVAACPEMALI 60 +KV +D C GHA+C+ + P++F +D+ G+ ++A EV P R+ CPE A+ Sbjct 1 MKVSIDHDLCQGHARCWDICPEVFELDEQGHGLVAVPEVPPVHEAKAREAAENCPERAIT 60 Query 61 L 61 + Sbjct 61 V 61 >gi|20804160|emb|CAD31363.1| PUTATIVE FERREDOXIN PROTEIN [Mesorhizobium loti R7A] Length=81 Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust. Identities = 21/66 (32%), Positives = 38/66 (58%), Gaps = 0/66 (0%) Query 1 VKVRLDPSRCVGHAQCYAVDPDLFPIDDSGNSILAEHEVRPEDMQLTRDGVAACPEMALI 60 +++ + ++C GHA+C+A PD+F +DD G + + +V + L G +CPE AL Sbjct 1 MRIIVHNAKCQGHARCWAQAPDIFKLDDDGYILPGDIQVAEGEQLLASQGARSCPERALE 60 Query 61 LEEDDA 66 ++ A Sbjct 61 VDRTSA 66 >gi|296169572|ref|ZP_06851192.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895838|gb|EFG75533.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=64 Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust. Identities = 24/64 (38%), Positives = 35/64 (55%), Gaps = 1/64 (1%) Query 1 VKVRLDPSRCVGHAQCYAVDPDLFPIDDSGNSILAEHEVRPEDMQ-LTRDGVAACPEMAL 59 +KV +DP RC GH C + P+ F + D S A EV P + + R+ +CPE A+ Sbjct 1 MKVWVDPERCQGHTLCAMIAPESFQLSDIDGSSSAVDEVVPTEREDQVREAAQSCPEQAI 60 Query 60 ILEE 63 I+ E Sbjct 61 IITE 64 >gi|118468913|ref|YP_889078.1| hypothetical protein MSMEG_4822 [Mycobacterium smegmatis str. MC2 155] gi|118170200|gb|ABK71096.1| conserved domain protein [Mycobacterium smegmatis str. MC2 155] Length=62 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 21/59 (36%), Positives = 32/59 (55%), Gaps = 0/59 (0%) Query 1 VKVRLDPSRCVGHAQCYAVDPDLFPIDDSGNSILAEHEVRPEDMQLTRDGVAACPEMAL 59 +KV +D RC GH C + P++F + D G ++ A EV E R+ + CPE A+ Sbjct 1 MKVAVDEDRCAGHGMCLTLCPEVFELSDDGWAVAAAGEVPAEHEAAVREAIDCCPESAI 59 >gi|120405113|ref|YP_954942.1| hypothetical protein Mvan_4159 [Mycobacterium vanbaalenii PYR-1] gi|119957931|gb|ABM14936.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=64 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 24/64 (38%), Positives = 35/64 (55%), Gaps = 1/64 (1%) Query 1 VKVRLDPSRCVGHAQCYAVDPDLFPIDDSGNSILAEHEVRPEDMQ-LTRDGVAACPEMAL 59 +KVR+D RC GH C + PD F + D + +EV P D + R+ +CPE A+ Sbjct 1 MKVRVDSERCQGHTLCAMIAPDSFELSDIDGTSSPINEVVPADQEDAVREAAHSCPEQAI 60 Query 60 ILEE 63 +EE Sbjct 61 SIEE 64 >gi|28394151|dbj|BAC57024.1| ferredxin [Micromonospora griseorubida] Length=74 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 23/64 (36%), Positives = 34/64 (54%), Gaps = 0/64 (0%) Query 1 VKVRLDPSRCVGHAQCYAVDPDLFPIDDSGNSILAEHEVRPEDMQLTRDGVAACPEMALI 60 +++ LD RCVG QC A P+LF D G ++ + V PE + R+ V CP A+ Sbjct 1 MRIVLDAERCVGAGQCEATAPELFTQGDDGLGLVRDRPVTPELLGPAREAVDRCPVRAIR 60 Query 61 LEED 64 +E Sbjct 61 IESS 64 Lambda K H 0.318 0.137 0.416 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 129524807608 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40