BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1787 Length=365 Score E Sequences producing significant alignments: (Bits) Value gi|57116909|ref|YP_177833.1| PPE family protein [Mycobacterium t... 711 0.0 gi|148661594|ref|YP_001283117.1| PPE family protein [Mycobacteri... 711 0.0 gi|254231975|ref|ZP_04925302.1| PPE family protein [Mycobacteriu... 711 0.0 gi|254364619|ref|ZP_04980665.1| PPE family protein [Mycobacteriu... 710 0.0 gi|15841255|ref|NP_336292.1| PPE family protein [Mycobacterium t... 709 0.0 gi|289574463|ref|ZP_06454690.1| PPE family protein [Mycobacteriu... 709 0.0 gi|289569852|ref|ZP_06450079.1| PPE family protein [Mycobacteriu... 707 0.0 gi|340626799|ref|YP_004745251.1| PPE family protein [Mycobacteri... 707 0.0 gi|253799173|ref|YP_003032174.1| PPE family protein [Mycobacteri... 704 0.0 gi|289554441|ref|ZP_06443651.1| PPE family protein [Mycobacteriu... 704 0.0 gi|294996698|ref|ZP_06802389.1| PPE family protein [Mycobacteriu... 704 0.0 gi|297731334|ref|ZP_06960452.1| PPE family protein [Mycobacteriu... 703 0.0 gi|344219609|gb|AEN00240.1| PPE family protein [Mycobacterium tu... 702 0.0 gi|167967964|ref|ZP_02550241.1| PPE family protein [Mycobacteriu... 682 0.0 gi|254550794|ref|ZP_05141241.1| PPE family protein [Mycobacteriu... 680 0.0 gi|313658666|ref|ZP_07815546.1| PPE family protein [Mycobacteriu... 674 0.0 gi|308379035|ref|ZP_07484774.2| putative PPE family protein [Myc... 660 0.0 gi|307079822|ref|ZP_07488992.1| putative PPE family protein [Myc... 627 8e-178 gi|323719696|gb|EGB28816.1| PPE family protein [Mycobacterium tu... 614 6e-174 gi|31792975|ref|NP_855468.1| PPE family protein [Mycobacterium b... 597 1e-168 gi|289745781|ref|ZP_06505159.1| PPE family protein [Mycobacteriu... 588 7e-166 gi|148823002|ref|YP_001287756.1| PPE family protein [Mycobacteri... 580 2e-163 gi|340626802|ref|YP_004745254.1| PPE family protein [Mycobacteri... 496 3e-138 gi|31792978|ref|NP_855471.1| PPE family protein [Mycobacterium b... 491 6e-137 gi|308370824|ref|ZP_07422853.2| putative PPE family protein [Myc... 489 3e-136 gi|57116912|ref|YP_177836.1| PPE family protein [Mycobacterium t... 489 3e-136 gi|15841259|ref|NP_336296.1| PPE family protein [Mycobacterium t... 488 5e-136 gi|289574467|ref|ZP_06454694.1| PPE family protein [Mycobacteriu... 487 1e-135 gi|289569856|ref|ZP_06450083.1| PPE family protein [Mycobacteriu... 486 2e-135 gi|289443254|ref|ZP_06432998.1| PPE family protein [Mycobacteriu... 440 2e-121 gi|306972117|ref|ZP_07484778.1| putative PPE family protein [Myc... 435 6e-120 gi|323719668|gb|EGB28789.1| PPE family protein [Mycobacterium tu... 422 3e-116 gi|307079826|ref|ZP_07488996.1| putative PPE family protein [Myc... 410 2e-112 gi|306776004|ref|ZP_07414341.1| PPE family protein [Mycobacteriu... 409 5e-112 gi|308402073|ref|ZP_07493516.2| hypothetical protein TMLG_01060 ... 345 6e-93 gi|289447405|ref|ZP_06437149.1| PPE family protein [Mycobacteriu... 345 7e-93 gi|306972073|ref|ZP_07484734.1| putative PPE family protein [Myc... 342 5e-92 gi|306775987|ref|ZP_07414324.1| putative PPE family protein [Myc... 332 5e-89 gi|323719699|gb|EGB28819.1| PPE family protein [Mycobacterium tu... 330 2e-88 gi|240172020|ref|ZP_04750679.1| PPE family protein [Mycobacteriu... 321 1e-85 gi|307079781|ref|ZP_07488951.1| putative PPE family protein [Myc... 320 2e-85 gi|323719408|gb|EGB28541.1| PPE family protein [Mycobacterium tu... 315 1e-83 gi|342861307|ref|ZP_08717955.1| PPE family protein [Mycobacteriu... 305 6e-81 gi|296164778|ref|ZP_06847340.1| PPE family protein [Mycobacteriu... 303 3e-80 gi|340627882|ref|YP_004746334.1| PPE family protein [Mycobacteri... 290 3e-76 gi|15842434|ref|NP_337471.1| PPE family protein [Mycobacterium t... 289 5e-76 gi|298526361|ref|ZP_07013770.1| PPE family protein [Mycobacteriu... 285 7e-75 gi|212596596|gb|ACJ35591.1| PPE24 [Mycobacterium intracellulare ... 281 9e-74 gi|253798020|ref|YP_003031021.1| PPE family protein [Mycobacteri... 281 2e-73 gi|339295729|gb|AEJ47840.1| PPE family protein [Mycobacterium tu... 280 2e-73 >gi|57116909|ref|YP_177833.1| PPE family protein [Mycobacterium tuberculosis H37Rv] gi|289447401|ref|ZP_06437145.1| PPE family protein [Mycobacterium tuberculosis CPHL_A] gi|289750354|ref|ZP_06509732.1| PPE family protein [Mycobacterium tuberculosis T92] 17 more sequence titles Length=365 Score = 711 bits (1835), Expect = 0.0, Method: Compositional matrix adjust. Identities = 364/365 (99%), Positives = 365/365 (100%), Gaps = 0/365 (0%) Query 1 LDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 +DFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA Sbjct 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 Query 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL Sbjct 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 Query 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV Sbjct 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 Query 181 AQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSYFATGM 240 AQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSYFATGM Sbjct 181 AQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSYFATGM 240 Query 241 AQFFASIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSW 300 AQFFASIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSW Sbjct 241 AQFFASIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSW 300 Query 301 VKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVAR 360 VKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVAR Sbjct 301 VKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVAR 360 Query 361 PPSAG 365 PPSAG Sbjct 361 PPSAG 365 >gi|148661594|ref|YP_001283117.1| PPE family protein [Mycobacterium tuberculosis H37Ra] gi|148505746|gb|ABQ73555.1| PPE family protein [Mycobacterium tuberculosis H37Ra] Length=405 Score = 711 bits (1835), Expect = 0.0, Method: Compositional matrix adjust. Identities = 365/365 (100%), Positives = 365/365 (100%), Gaps = 0/365 (0%) Query 1 LDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 LDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA Sbjct 41 LDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 100 Query 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL Sbjct 101 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 160 Query 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV Sbjct 161 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 220 Query 181 AQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSYFATGM 240 AQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSYFATGM Sbjct 221 AQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSYFATGM 280 Query 241 AQFFASIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSW 300 AQFFASIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSW Sbjct 281 AQFFASIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSW 340 Query 301 VKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVAR 360 VKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVAR Sbjct 341 VKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVAR 400 Query 361 PPSAG 365 PPSAG Sbjct 401 PPSAG 405 >gi|254231975|ref|ZP_04925302.1| PPE family protein [Mycobacterium tuberculosis C] gi|124601034|gb|EAY60044.1| PPE family protein [Mycobacterium tuberculosis C] Length=365 Score = 711 bits (1834), Expect = 0.0, Method: Compositional matrix adjust. Identities = 363/365 (99%), Positives = 364/365 (99%), Gaps = 0/365 (0%) Query 1 LDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 +DFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA Sbjct 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 Query 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL Sbjct 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 Query 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV Sbjct 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 Query 181 AQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSYFATGM 240 AQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSYFATGM Sbjct 181 AQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSYFATGM 240 Query 241 AQFFASIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSW 300 AQFFASIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVS SLARANKIGALSVPPSW Sbjct 241 AQFFASIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVSVSLARANKIGALSVPPSW 300 Query 301 VKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVAR 360 VKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVAR Sbjct 301 VKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVAR 360 Query 361 PPSAG 365 PPSAG Sbjct 361 PPSAG 365 >gi|254364619|ref|ZP_04980665.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem] gi|134150133|gb|EBA42178.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem] Length=371 Score = 710 bits (1832), Expect = 0.0, Method: Compositional matrix adjust. Identities = 364/365 (99%), Positives = 364/365 (99%), Gaps = 0/365 (0%) Query 1 LDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 LDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA Sbjct 7 LDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 66 Query 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL Sbjct 67 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 126 Query 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV Sbjct 127 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 186 Query 181 AQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSYFATGM 240 AQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSYFATGM Sbjct 187 AQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSYFATGM 246 Query 241 AQFFASIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSW 300 AQFFASIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVS SLARANKIGALSVPPSW Sbjct 247 AQFFASIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVSVSLARANKIGALSVPPSW 306 Query 301 VKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVAR 360 VKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVAR Sbjct 307 VKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVAR 366 Query 361 PPSAG 365 PPSAG Sbjct 367 PPSAG 371 >gi|15841255|ref|NP_336292.1| PPE family protein [Mycobacterium tuberculosis CDC1551] gi|13881482|gb|AAK46106.1| PPE family protein [Mycobacterium tuberculosis CDC1551] Length=405 Score = 709 bits (1831), Expect = 0.0, Method: Compositional matrix adjust. Identities = 364/365 (99%), Positives = 364/365 (99%), Gaps = 0/365 (0%) Query 1 LDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 LDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA Sbjct 41 LDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 100 Query 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL Sbjct 101 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 160 Query 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV Sbjct 161 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 220 Query 181 AQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSYFATGM 240 AQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSYFATGM Sbjct 221 AQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSYFATGM 280 Query 241 AQFFASIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSW 300 AQFFASIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVS SLARANKIGALSVPPSW Sbjct 281 AQFFASIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVSVSLARANKIGALSVPPSW 340 Query 301 VKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVAR 360 VKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVAR Sbjct 341 VKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVAR 400 Query 361 PPSAG 365 PPSAG Sbjct 401 PPSAG 405 >gi|289574463|ref|ZP_06454690.1| PPE family protein [Mycobacterium tuberculosis K85] gi|289538894|gb|EFD43472.1| PPE family protein [Mycobacterium tuberculosis K85] Length=365 Score = 709 bits (1830), Expect = 0.0, Method: Compositional matrix adjust. Identities = 363/365 (99%), Positives = 364/365 (99%), Gaps = 0/365 (0%) Query 1 LDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 +DFGALPPEINSGRMYCGPGSGPMLAAAA WDGVAVELGLAATGYASVIAELTGAPWVGA Sbjct 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAPWDGVAVELGLAATGYASVIAELTGAPWVGA 60 Query 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL Sbjct 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 Query 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV Sbjct 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 Query 181 AQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSYFATGM 240 AQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSYFATGM Sbjct 181 AQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSYFATGM 240 Query 241 AQFFASIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSW 300 AQFFASIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSW Sbjct 241 AQFFASIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSW 300 Query 301 VKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVAR 360 VKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVAR Sbjct 301 VKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVAR 360 Query 361 PPSAG 365 PPSAG Sbjct 361 PPSAG 365 >gi|289569852|ref|ZP_06450079.1| PPE family protein [Mycobacterium tuberculosis T17] gi|289543606|gb|EFD47254.1| PPE family protein [Mycobacterium tuberculosis T17] Length=365 Score = 707 bits (1826), Expect = 0.0, Method: Compositional matrix adjust. Identities = 362/365 (99%), Positives = 365/365 (100%), Gaps = 0/365 (0%) Query 1 LDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 +DFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA Sbjct 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 Query 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL Sbjct 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 Query 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV Sbjct 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 Query 181 AQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSYFATGM 240 AQVAAVAAMPGLLQRLSSAASVSWS+PNDWW+VRLLGSITPTERTTIVRLLGQSYFATGM Sbjct 181 AQVAAVAAMPGLLQRLSSAASVSWSHPNDWWIVRLLGSITPTERTTIVRLLGQSYFATGM 240 Query 241 AQFFASIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSW 300 AQFFASIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSW Sbjct 241 AQFFASIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSW 300 Query 301 VKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVAR 360 VKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVAR Sbjct 301 VKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVAR 360 Query 361 PPSAG 365 PPSAG Sbjct 361 PPSAG 365 >gi|340626799|ref|YP_004745251.1| PPE family protein [Mycobacterium canettii CIPT 140010059] gi|340004989|emb|CCC44137.1| PPE family protein [Mycobacterium canettii CIPT 140010059] Length=365 Score = 707 bits (1825), Expect = 0.0, Method: Compositional matrix adjust. Identities = 362/365 (99%), Positives = 363/365 (99%), Gaps = 0/365 (0%) Query 1 LDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 +DFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA Sbjct 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 Query 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL Sbjct 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 Query 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV Sbjct 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 Query 181 AQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSYFATGM 240 AQVAAVAAMPGLLQRLSSAASVSW NPNDWWLVRLLGSITPTERTTIVRLLGQSYFATGM Sbjct 181 AQVAAVAAMPGLLQRLSSAASVSWPNPNDWWLVRLLGSITPTERTTIVRLLGQSYFATGM 240 Query 241 AQFFASIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSW 300 AQFFASIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSW Sbjct 241 AQFFASIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSW 300 Query 301 VKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVAR 360 VKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITRRSG FAHRYGFRHSVVAR Sbjct 301 VKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITRRSGTFAHRYGFRHSVVAR 360 Query 361 PPSAG 365 PPSAG Sbjct 361 PPSAG 365 >gi|253799173|ref|YP_003032174.1| PPE family protein [Mycobacterium tuberculosis KZN 1435] gi|253320676|gb|ACT25279.1| PPE family protein [Mycobacterium tuberculosis KZN 1435] gi|328458928|gb|AEB04351.1| PPE family protein [Mycobacterium tuberculosis KZN 4207] Length=405 Score = 704 bits (1817), Expect = 0.0, Method: Compositional matrix adjust. Identities = 361/365 (99%), Positives = 362/365 (99%), Gaps = 0/365 (0%) Query 1 LDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 LDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA Sbjct 41 LDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 100 Query 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL Sbjct 101 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 160 Query 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV Sbjct 161 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 220 Query 181 AQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSYFATGM 240 AQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSY ATGM Sbjct 221 AQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSYLATGM 280 Query 241 AQFFASIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSW 300 A+F SIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSW Sbjct 281 ARFLTSIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSW 340 Query 301 VKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVAR 360 VKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVAR Sbjct 341 VKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVAR 400 Query 361 PPSAG 365 PPSAG Sbjct 401 PPSAG 405 >gi|289554441|ref|ZP_06443651.1| PPE family protein [Mycobacterium tuberculosis KZN 605] gi|289439073|gb|EFD21566.1| PPE family protein [Mycobacterium tuberculosis KZN 605] Length=391 Score = 704 bits (1816), Expect = 0.0, Method: Compositional matrix adjust. Identities = 361/365 (99%), Positives = 362/365 (99%), Gaps = 0/365 (0%) Query 1 LDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 LDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA Sbjct 27 LDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 86 Query 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL Sbjct 87 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 146 Query 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV Sbjct 147 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 206 Query 181 AQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSYFATGM 240 AQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSY ATGM Sbjct 207 AQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSYLATGM 266 Query 241 AQFFASIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSW 300 A+F SIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSW Sbjct 267 ARFLTSIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSW 326 Query 301 VKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVAR 360 VKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVAR Sbjct 327 VKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVAR 386 Query 361 PPSAG 365 PPSAG Sbjct 387 PPSAG 391 >gi|294996698|ref|ZP_06802389.1| PPE family protein [Mycobacterium tuberculosis 210] gi|297634345|ref|ZP_06952125.1| PPE family protein [Mycobacterium tuberculosis KZN 4207] Length=365 Score = 704 bits (1816), Expect = 0.0, Method: Compositional matrix adjust. Identities = 360/365 (99%), Positives = 362/365 (99%), Gaps = 0/365 (0%) Query 1 LDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 +DFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA Sbjct 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 Query 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL Sbjct 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 Query 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV Sbjct 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 Query 181 AQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSYFATGM 240 AQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSY ATGM Sbjct 181 AQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSYLATGM 240 Query 241 AQFFASIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSW 300 A+F SIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSW Sbjct 241 ARFLTSIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSW 300 Query 301 VKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVAR 360 VKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVAR Sbjct 301 VKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVAR 360 Query 361 PPSAG 365 PPSAG Sbjct 361 PPSAG 365 >gi|297731334|ref|ZP_06960452.1| PPE family protein [Mycobacterium tuberculosis KZN R506] Length=371 Score = 703 bits (1815), Expect = 0.0, Method: Compositional matrix adjust. Identities = 361/365 (99%), Positives = 362/365 (99%), Gaps = 0/365 (0%) Query 1 LDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 LDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA Sbjct 7 LDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 66 Query 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL Sbjct 67 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 126 Query 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV Sbjct 127 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 186 Query 181 AQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSYFATGM 240 AQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSY ATGM Sbjct 187 AQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSYLATGM 246 Query 241 AQFFASIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSW 300 A+F SIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSW Sbjct 247 ARFLTSIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSW 306 Query 301 VKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVAR 360 VKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVAR Sbjct 307 VKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVAR 366 Query 361 PPSAG 365 PPSAG Sbjct 367 PPSAG 371 >gi|344219609|gb|AEN00240.1| PPE family protein [Mycobacterium tuberculosis CTRI-2] Length=365 Score = 702 bits (1811), Expect = 0.0, Method: Compositional matrix adjust. Identities = 359/365 (99%), Positives = 361/365 (99%), Gaps = 0/365 (0%) Query 1 LDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 +DFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA Sbjct 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 Query 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL Sbjct 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 Query 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV Sbjct 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 Query 181 AQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSYFATGM 240 AQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSY ATGM Sbjct 181 AQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSYLATGM 240 Query 241 AQFFASIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSW 300 A+F SIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVSASLAR NKIGALSVPPSW Sbjct 241 ARFLTSIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVSASLARGNKIGALSVPPSW 300 Query 301 VKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVAR 360 VKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVAR Sbjct 301 VKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVAR 360 Query 361 PPSAG 365 PPSAG Sbjct 361 PPSAG 365 >gi|167967964|ref|ZP_02550241.1| PPE family protein [Mycobacterium tuberculosis H37Ra] Length=351 Score = 682 bits (1759), Expect = 0.0, Method: Compositional matrix adjust. Identities = 351/351 (100%), Positives = 351/351 (100%), Gaps = 0/351 (0%) Query 15 MYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGAASLSMVAAATPYVA 74 MYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGAASLSMVAAATPYVA Sbjct 1 MYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGAASLSMVAAATPYVA 60 Query 75 WLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTLIATNFFGQNSAAIA 134 WLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTLIATNFFGQNSAAIA Sbjct 61 WLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTLIATNFFGQNSAAIA 120 Query 135 VAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVVAQVAAVAAMPGLLQ 194 VAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVVAQVAAVAAMPGLLQ Sbjct 121 VAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVVAQVAAVAAMPGLLQ 180 Query 195 RLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSYFATGMAQFFASIAQQLTFG 254 RLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSYFATGMAQFFASIAQQLTFG Sbjct 181 RLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSYFATGMAQFFASIAQQLTFG 240 Query 255 PGGTTAGSGGAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSWVKTTALTESPVAHA 314 PGGTTAGSGGAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSWVKTTALTESPVAHA Sbjct 241 PGGTTAGSGGAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSWVKTTALTESPVAHA 300 Query 315 VSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVARPPSAG 365 VSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVARPPSAG Sbjct 301 VSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVARPPSAG 351 >gi|254550794|ref|ZP_05141241.1| PPE family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] Length=351 Score = 680 bits (1754), Expect = 0.0, Method: Compositional matrix adjust. Identities = 350/351 (99%), Positives = 350/351 (99%), Gaps = 0/351 (0%) Query 15 MYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGAASLSMVAAATPYVA 74 MYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTG PWVGAASLSMVAAATPYVA Sbjct 1 MYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGVPWVGAASLSMVAAATPYVA 60 Query 75 WLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTLIATNFFGQNSAAIA 134 WLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTLIATNFFGQNSAAIA Sbjct 61 WLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTLIATNFFGQNSAAIA 120 Query 135 VAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVVAQVAAVAAMPGLLQ 194 VAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVVAQVAAVAAMPGLLQ Sbjct 121 VAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVVAQVAAVAAMPGLLQ 180 Query 195 RLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSYFATGMAQFFASIAQQLTFG 254 RLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSYFATGMAQFFASIAQQLTFG Sbjct 181 RLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSYFATGMAQFFASIAQQLTFG 240 Query 255 PGGTTAGSGGAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSWVKTTALTESPVAHA 314 PGGTTAGSGGAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSWVKTTALTESPVAHA Sbjct 241 PGGTTAGSGGAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSWVKTTALTESPVAHA 300 Query 315 VSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVARPPSAG 365 VSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVARPPSAG Sbjct 301 VSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVARPPSAG 351 >gi|313658666|ref|ZP_07815546.1| PPE family protein [Mycobacterium tuberculosis KZN V2475] Length=351 Score = 674 bits (1740), Expect = 0.0, Method: Compositional matrix adjust. Identities = 347/351 (99%), Positives = 348/351 (99%), Gaps = 0/351 (0%) Query 15 MYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGAASLSMVAAATPYVA 74 MYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGAASLSMVAAATPYVA Sbjct 1 MYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGAASLSMVAAATPYVA 60 Query 75 WLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTLIATNFFGQNSAAIA 134 WLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTLIATNFFGQNSAAIA Sbjct 61 WLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTLIATNFFGQNSAAIA 120 Query 135 VAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVVAQVAAVAAMPGLLQ 194 VAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVVAQVAAVAAMPGLLQ Sbjct 121 VAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVVAQVAAVAAMPGLLQ 180 Query 195 RLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSYFATGMAQFFASIAQQLTFG 254 RLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSY ATGMA+F SIAQQLTFG Sbjct 181 RLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSYLATGMARFLTSIAQQLTFG 240 Query 255 PGGTTAGSGGAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSWVKTTALTESPVAHA 314 PGGTTAGSGGAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSWVKTTALTESPVAHA Sbjct 241 PGGTTAGSGGAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSWVKTTALTESPVAHA 300 Query 315 VSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVARPPSAG 365 VSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVARPPSAG Sbjct 301 VSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVARPPSAG 351 >gi|308379035|ref|ZP_07484774.2| putative PPE family protein [Mycobacterium tuberculosis SUMu010] gi|308358415|gb|EFP47266.1| putative PPE family protein [Mycobacterium tuberculosis SUMu010] Length=342 Score = 660 bits (1703), Expect = 0.0, Method: Compositional matrix adjust. Identities = 342/342 (100%), Positives = 342/342 (100%), Gaps = 0/342 (0%) Query 24 MLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGAASLSMVAAATPYVAWLSQAAARA 83 MLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGAASLSMVAAATPYVAWLSQAAARA Sbjct 1 MLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGAASLSMVAAATPYVAWLSQAAARA 60 Query 84 EQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTLIATNFFGQNSAAIAVAEAQYAEM 143 EQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTLIATNFFGQNSAAIAVAEAQYAEM Sbjct 61 EQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTLIATNFFGQNSAAIAVAEAQYAEM 120 Query 144 WAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVVAQVAAVAAMPGLLQRLSSAASVS 203 WAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVVAQVAAVAAMPGLLQRLSSAASVS Sbjct 121 WAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVVAQVAAVAAMPGLLQRLSSAASVS 180 Query 204 WSNPNDWWLVRLLGSITPTERTTIVRLLGQSYFATGMAQFFASIAQQLTFGPGGTTAGSG 263 WSNPNDWWLVRLLGSITPTERTTIVRLLGQSYFATGMAQFFASIAQQLTFGPGGTTAGSG Sbjct 181 WSNPNDWWLVRLLGSITPTERTTIVRLLGQSYFATGMAQFFASIAQQLTFGPGGTTAGSG 240 Query 264 GAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSWVKTTALTESPVAHAVSANPTVGS 323 GAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSWVKTTALTESPVAHAVSANPTVGS Sbjct 241 GAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSWVKTTALTESPVAHAVSANPTVGS 300 Query 324 SHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVARPPSAG 365 SHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVARPPSAG Sbjct 301 SHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVARPPSAG 342 >gi|307079822|ref|ZP_07488992.1| putative PPE family protein [Mycobacterium tuberculosis SUMu011] gi|308362342|gb|EFP51193.1| putative PPE family protein [Mycobacterium tuberculosis SUMu011] Length=323 Score = 627 bits (1618), Expect = 8e-178, Method: Compositional matrix adjust. Identities = 323/323 (100%), Positives = 323/323 (100%), Gaps = 0/323 (0%) Query 43 TGYASVIAELTGAPWVGAASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFV 102 TGYASVIAELTGAPWVGAASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFV Sbjct 1 TGYASVIAELTGAPWVGAASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFV 60 Query 103 MTVPPPVITANRVLVMTLIATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASAS 162 MTVPPPVITANRVLVMTLIATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASAS Sbjct 61 MTVPPPVITANRVLVMTLIATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASAS 120 Query 163 RLIPFAAPPKTTNSAGVVAQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPT 222 RLIPFAAPPKTTNSAGVVAQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPT Sbjct 121 RLIPFAAPPKTTNSAGVVAQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPT 180 Query 223 ERTTIVRLLGQSYFATGMAQFFASIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVS 282 ERTTIVRLLGQSYFATGMAQFFASIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVS Sbjct 181 ERTTIVRLLGQSYFATGMAQFFASIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVS 240 Query 283 ASLARANKIGALSVPPSWVKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITR 342 ASLARANKIGALSVPPSWVKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITR Sbjct 241 ASLARANKIGALSVPPSWVKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITR 300 Query 343 RSGAFAHRYGFRHSVVARPPSAG 365 RSGAFAHRYGFRHSVVARPPSAG Sbjct 301 RSGAFAHRYGFRHSVVARPPSAG 323 >gi|323719696|gb|EGB28816.1| PPE family protein [Mycobacterium tuberculosis CDC1551A] Length=318 Score = 614 bits (1584), Expect = 6e-174, Method: Compositional matrix adjust. Identities = 316/318 (99%), Positives = 317/318 (99%), Gaps = 0/318 (0%) Query 48 VIAELTGAPWVGAASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPP 107 +IAELTGAPWVGAASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPP Sbjct 1 MIAELTGAPWVGAASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPP 60 Query 108 PVITANRVLVMTLIATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPF 167 PVITANRVLVMTLIATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPF Sbjct 61 PVITANRVLVMTLIATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPF 120 Query 168 AAPPKTTNSAGVVAQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTI 227 AAPPKTTNSAGVVAQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTI Sbjct 121 AAPPKTTNSAGVVAQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTI 180 Query 228 VRLLGQSYFATGMAQFFASIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVSASLAR 287 VRLLGQSYFATGMAQFFASIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVS SLAR Sbjct 181 VRLLGQSYFATGMAQFFASIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVSVSLAR 240 Query 288 ANKIGALSVPPSWVKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITRRSGAF 347 ANKIGALSVPPSWVKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITRRSGAF Sbjct 241 ANKIGALSVPPSWVKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITRRSGAF 300 Query 348 AHRYGFRHSVVARPPSAG 365 AHRYGFRHSVVARPPSAG Sbjct 301 AHRYGFRHSVVARPPSAG 318 >gi|31792975|ref|NP_855468.1| PPE family protein [Mycobacterium bovis AF2122/97] gi|121637688|ref|YP_977911.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224990172|ref|YP_002644859.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|31618566|emb|CAD94518.1| PPE FAMILY PROTEIN [Mycobacterium bovis AF2122/97] gi|121493335|emb|CAL71806.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224773285|dbj|BAH26091.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|341601715|emb|CCC64388.1| PPE family protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=364 Score = 597 bits (1538), Expect = 1e-168, Method: Compositional matrix adjust. Identities = 362/365 (99%), Positives = 363/365 (99%), Gaps = 1/365 (0%) Query 1 LDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 +DFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA Sbjct 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 Query 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL Sbjct 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 Query 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV Sbjct 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 Query 181 AQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSYFATGM 240 AQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSYFATGM Sbjct 181 AQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSYFATGM 240 Query 241 AQFFASIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSW 300 AQFFASIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSW Sbjct 241 AQFFASIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSW 300 Query 301 VKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVAR 360 VKTTALTE P AHAVSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVAR Sbjct 301 VKTTALTE-PGAHAVSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVAR 359 Query 361 PPSAG 365 PPSAG Sbjct 360 PPSAG 364 >gi|289745781|ref|ZP_06505159.1| PPE family protein [Mycobacterium tuberculosis 02_1987] gi|289686309|gb|EFD53797.1| PPE family protein [Mycobacterium tuberculosis 02_1987] Length=390 Score = 588 bits (1515), Expect = 7e-166, Method: Compositional matrix adjust. Identities = 347/365 (96%), Positives = 348/365 (96%), Gaps = 15/365 (4%) Query 1 LDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 LDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA Sbjct 41 LDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 100 Query 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL Sbjct 101 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 160 Query 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV Sbjct 161 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 220 Query 181 AQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSYFATGM 240 AQ + ASVSW NPNDWWLVRLLGSITPTERTTIVRLLGQSYFATGM Sbjct 221 AQ---------------AVASVSWPNPNDWWLVRLLGSITPTERTTIVRLLGQSYFATGM 265 Query 241 AQFFASIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSW 300 AQFFASIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSW Sbjct 266 AQFFASIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSW 325 Query 301 VKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVAR 360 VKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVAR Sbjct 326 VKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVAR 385 Query 361 PPSAG 365 PPSAG Sbjct 386 PPSAG 390 >gi|148823002|ref|YP_001287756.1| PPE family protein [Mycobacterium tuberculosis F11] gi|148721529|gb|ABR06154.1| PPE family protein [Mycobacterium tuberculosis F11] Length=350 Score = 580 bits (1494), Expect = 2e-163, Method: Compositional matrix adjust. Identities = 342/365 (94%), Positives = 345/365 (95%), Gaps = 15/365 (4%) Query 1 LDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 +DFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA Sbjct 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 Query 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL Sbjct 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 Query 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV Sbjct 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 Query 181 AQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSYFATGM 240 AQ + ASVSW NPNDWWLVRLLGSITPTERTTIVRLLGQSY ATGM Sbjct 181 AQ---------------AVASVSWPNPNDWWLVRLLGSITPTERTTIVRLLGQSYLATGM 225 Query 241 AQFFASIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSW 300 A+F SIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSW Sbjct 226 ARFLTSIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSW 285 Query 301 VKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVAR 360 VKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVAR Sbjct 286 VKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVAR 345 Query 361 PPSAG 365 PPSAG Sbjct 346 PPSAG 350 >gi|340626802|ref|YP_004745254.1| PPE family protein [Mycobacterium canettii CIPT 140010059] gi|340004992|emb|CCC44140.1| PPE family protein [Mycobacterium canettii CIPT 140010059] Length=350 Score = 496 bits (1276), Expect = 3e-138, Method: Compositional matrix adjust. Identities = 310/366 (85%), Positives = 318/366 (87%), Gaps = 17/366 (4%) Query 1 LDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 +DFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA Sbjct 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 Query 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL Sbjct 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 Query 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV Sbjct 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 Query 181 AQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSYFATGM 240 AQ + ASVSW NPNDWWLVRLLGSITPTERTTIVRLLGQSY ATGM Sbjct 181 AQ---------------AVASVSWPNPNDWWLVRLLGSITPTERTTIVRLLGQSYLATGM 225 Query 241 AQFFASIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSW 300 A+F SIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVSASLARA +G LSVPPSW Sbjct 226 ARFLTSIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVSASLARAEPVGRLSVPPSW 285 Query 301 -VKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVA 359 V A E P A + SS G GLLRG+PL +R RRSGAFAHRYGFRHSV+ Sbjct 286 AVAAPAFAEKPEAGTPMSVIGEASSCGQGGLLRGIPL-ARAGRRSGAFAHRYGFRHSVIT 344 Query 360 RPPSAG 365 R PSAG Sbjct 345 RSPSAG 350 >gi|31792978|ref|NP_855471.1| PPE family protein [Mycobacterium bovis AF2122/97] gi|31618569|emb|CAD94521.1| PPE FAMILY PROTEIN [Mycobacterium bovis AF2122/97] Length=350 Score = 491 bits (1265), Expect = 6e-137, Method: Compositional matrix adjust. Identities = 308/366 (85%), Positives = 317/366 (87%), Gaps = 17/366 (4%) Query 1 LDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 +DFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA Sbjct 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 Query 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL Sbjct 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 Query 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV Sbjct 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 Query 181 AQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSYFATGM 240 AQ + ASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSY ATGM Sbjct 181 AQ---------------AVASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSYLATGM 225 Query 241 AQFFASIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSW 300 A+F SIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGA AVSASLARA +G LSVPPSW Sbjct 226 ARFLTSIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGAGPAVSASLARAEPVGRLSVPPSW 285 Query 301 -VKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVA 359 V A E P A + SS G GLLRG+PL +R RR+GAFAHRYGFRHSV+ Sbjct 286 AVAAPAFAEKPEAGTPMSVIGEASSCGQGGLLRGIPL-ARAGRRTGAFAHRYGFRHSVIT 344 Query 360 RPPSAG 365 R PSAG Sbjct 345 RSPSAG 350 >gi|308370824|ref|ZP_07422853.2| putative PPE family protein [Mycobacterium tuberculosis SUMu003] gi|308375681|ref|ZP_07444735.2| putative PPE family protein [Mycobacterium tuberculosis SUMu007] gi|308377826|ref|ZP_07480546.2| putative PPE family protein [Mycobacterium tuberculosis SUMu009] gi|308330738|gb|EFP19589.1| putative PPE family protein [Mycobacterium tuberculosis SUMu003] gi|308345534|gb|EFP34385.1| putative PPE family protein [Mycobacterium tuberculosis SUMu007] gi|308354478|gb|EFP43329.1| putative PPE family protein [Mycobacterium tuberculosis SUMu009] Length=390 Score = 489 bits (1260), Expect = 3e-136, Method: Compositional matrix adjust. Identities = 308/366 (85%), Positives = 316/366 (87%), Gaps = 17/366 (4%) Query 1 LDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 LDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA Sbjct 41 LDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 100 Query 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL Sbjct 101 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 160 Query 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV Sbjct 161 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 220 Query 181 AQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSYFATGM 240 AQ + ASVSW NPNDWWLVRLLGSITPTERTTIVRLLGQSY ATGM Sbjct 221 AQ---------------AVASVSWPNPNDWWLVRLLGSITPTERTTIVRLLGQSYLATGM 265 Query 241 AQFFASIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSW 300 A+F SIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGA AVSASLARA +G LSVPPSW Sbjct 266 ARFLTSIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGAGPAVSASLARAEPVGRLSVPPSW 325 Query 301 -VKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVA 359 V A E P A + SS G GLLRG+PL +R RR+GAFAHRYGFRHSV+ Sbjct 326 AVAAPAFAEKPEAGTPMSVIGEASSCGQGGLLRGIPL-ARAGRRTGAFAHRYGFRHSVIT 384 Query 360 RPPSAG 365 R PSAG Sbjct 385 RSPSAG 390 >gi|57116912|ref|YP_177836.1| PPE family protein [Mycobacterium tuberculosis H37Rv] gi|121637691|ref|YP_977914.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148661597|ref|YP_001283120.1| PPE family protein [Mycobacterium tuberculosis H37Ra] 47 more sequence titles Length=350 Score = 489 bits (1259), Expect = 3e-136, Method: Compositional matrix adjust. Identities = 307/366 (84%), Positives = 316/366 (87%), Gaps = 17/366 (4%) Query 1 LDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 +DFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA Sbjct 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 Query 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL Sbjct 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 Query 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV Sbjct 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 Query 181 AQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSYFATGM 240 AQ + ASVSW NPNDWWLVRLLGSITPTERTTIVRLLGQSY ATGM Sbjct 181 AQ---------------AVASVSWPNPNDWWLVRLLGSITPTERTTIVRLLGQSYLATGM 225 Query 241 AQFFASIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSW 300 A+F SIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGA AVSASLARA +G LSVPPSW Sbjct 226 ARFLTSIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGAGPAVSASLARAEPVGRLSVPPSW 285 Query 301 -VKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVA 359 V A E P A + SS G GLLRG+PL +R RR+GAFAHRYGFRHSV+ Sbjct 286 AVAAPAFAEKPEAGTPMSVIGEASSCGQGGLLRGIPL-ARAGRRTGAFAHRYGFRHSVIT 344 Query 360 RPPSAG 365 R PSAG Sbjct 345 RSPSAG 350 >gi|15841259|ref|NP_336296.1| PPE family protein [Mycobacterium tuberculosis CDC1551] gi|167967961|ref|ZP_02550238.1| PPE family protein [Mycobacterium tuberculosis H37Ra] gi|253799169|ref|YP_003032170.1| PPE family protein [Mycobacterium tuberculosis KZN 1435] gi|254550799|ref|ZP_05141246.1| PPE family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|13881486|gb|AAK46110.1| PPE family protein [Mycobacterium tuberculosis CDC1551] gi|253320672|gb|ACT25275.1| PPE family protein [Mycobacterium tuberculosis KZN 1435] gi|328458924|gb|AEB04347.1| PPE family protein [Mycobacterium tuberculosis KZN 4207] Length=363 Score = 488 bits (1257), Expect = 5e-136, Method: Compositional matrix adjust. Identities = 307/366 (84%), Positives = 316/366 (87%), Gaps = 17/366 (4%) Query 1 LDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 +DFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA Sbjct 14 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 73 Query 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL Sbjct 74 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 133 Query 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV Sbjct 134 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 193 Query 181 AQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSYFATGM 240 AQ + ASVSW NPNDWWLVRLLGSITPTERTTIVRLLGQSY ATGM Sbjct 194 AQ---------------AVASVSWPNPNDWWLVRLLGSITPTERTTIVRLLGQSYLATGM 238 Query 241 AQFFASIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSW 300 A+F SIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGA AVSASLARA +G LSVPPSW Sbjct 239 ARFLTSIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGAGPAVSASLARAEPVGRLSVPPSW 298 Query 301 -VKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVA 359 V A E P A + SS G GLLRG+PL +R RR+GAFAHRYGFRHSV+ Sbjct 299 AVAAPAFAEKPEAGTPMSVIGEASSCGQGGLLRGIPL-ARAGRRTGAFAHRYGFRHSVIT 357 Query 360 RPPSAG 365 R PSAG Sbjct 358 RSPSAG 363 >gi|289574467|ref|ZP_06454694.1| PPE family protein [Mycobacterium tuberculosis K85] gi|289538898|gb|EFD43476.1| PPE family protein [Mycobacterium tuberculosis K85] Length=350 Score = 487 bits (1254), Expect = 1e-135, Method: Compositional matrix adjust. Identities = 306/366 (84%), Positives = 315/366 (87%), Gaps = 17/366 (4%) Query 1 LDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 +DFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTG PWVGA Sbjct 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGPPWVGA 60 Query 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL Sbjct 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 Query 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV Sbjct 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 Query 181 AQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSYFATGM 240 AQ + ASVSW NPNDWWLVRLLGSITPTERTTIVRLLGQSY ATGM Sbjct 181 AQ---------------AVASVSWPNPNDWWLVRLLGSITPTERTTIVRLLGQSYLATGM 225 Query 241 AQFFASIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSW 300 A+F SIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGA AVSASLARA +G LSVPPSW Sbjct 226 ARFLTSIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGAGPAVSASLARAEPVGRLSVPPSW 285 Query 301 -VKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVA 359 V A E P A + SS G GLLRG+PL +R RR+GAFAHRYGFRHSV+ Sbjct 286 AVAAPAFAEKPEAGTPMSVIGEASSCGQGGLLRGIPL-ARAGRRTGAFAHRYGFRHSVIT 344 Query 360 RPPSAG 365 R PSAG Sbjct 345 RSPSAG 350 >gi|289569856|ref|ZP_06450083.1| PPE family protein [Mycobacterium tuberculosis T17] gi|289543610|gb|EFD47258.1| PPE family protein [Mycobacterium tuberculosis T17] Length=350 Score = 486 bits (1252), Expect = 2e-135, Method: Compositional matrix adjust. Identities = 306/366 (84%), Positives = 315/366 (87%), Gaps = 17/366 (4%) Query 1 LDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 +DFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA Sbjct 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 Query 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 ASLSM AAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL Sbjct 61 ASLSMEAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 Query 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV Sbjct 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 Query 181 AQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSYFATGM 240 AQ + ASVSW NPNDWWLVRLLGSITPTERTTIVRLLGQSY ATGM Sbjct 181 AQ---------------AVASVSWPNPNDWWLVRLLGSITPTERTTIVRLLGQSYLATGM 225 Query 241 AQFFASIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSW 300 A+F SIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGA AVSASLARA +G LSVPPSW Sbjct 226 ARFLTSIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGAGPAVSASLARAEPVGRLSVPPSW 285 Query 301 -VKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVA 359 V A E P A + SS G GLLRG+PL +R RR+GAFAHRYGFRHSV+ Sbjct 286 AVAAPAFAEKPEAGTPMSVIGEASSCGQGGLLRGIPL-ARAGRRTGAFAHRYGFRHSVIT 344 Query 360 RPPSAG 365 R PSAG Sbjct 345 RSPSAG 350 >gi|289443254|ref|ZP_06432998.1| PPE family protein [Mycobacterium tuberculosis T46] gi|308402048|ref|ZP_07493512.2| hypothetical protein TMLG_01055 [Mycobacterium tuberculosis SUMu012] gi|289416173|gb|EFD13413.1| PPE family protein [Mycobacterium tuberculosis T46] gi|308365996|gb|EFP54847.1| hypothetical protein TMLG_01055 [Mycobacterium tuberculosis SUMu012] Length=223 Score = 440 bits (1131), Expect = 2e-121, Method: Compositional matrix adjust. Identities = 223/223 (100%), Positives = 223/223 (100%), Gaps = 0/223 (0%) Query 143 MWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVVAQVAAVAAMPGLLQRLSSAASV 202 MWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVVAQVAAVAAMPGLLQRLSSAASV Sbjct 1 MWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVVAQVAAVAAMPGLLQRLSSAASV 60 Query 203 SWSNPNDWWLVRLLGSITPTERTTIVRLLGQSYFATGMAQFFASIAQQLTFGPGGTTAGS 262 SWSNPNDWWLVRLLGSITPTERTTIVRLLGQSYFATGMAQFFASIAQQLTFGPGGTTAGS Sbjct 61 SWSNPNDWWLVRLLGSITPTERTTIVRLLGQSYFATGMAQFFASIAQQLTFGPGGTTAGS 120 Query 263 GGAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSWVKTTALTESPVAHAVSANPTVG 322 GGAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSWVKTTALTESPVAHAVSANPTVG Sbjct 121 GGAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSWVKTTALTESPVAHAVSANPTVG 180 Query 323 SSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVARPPSAG 365 SSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVARPPSAG Sbjct 181 SSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVARPPSAG 223 >gi|306972117|ref|ZP_07484778.1| putative PPE family protein [Mycobacterium tuberculosis SUMu010] gi|308358405|gb|EFP47256.1| putative PPE family protein [Mycobacterium tuberculosis SUMu010] Length=326 Score = 435 bits (1118), Expect = 6e-120, Method: Compositional matrix adjust. Identities = 278/336 (83%), Positives = 286/336 (86%), Gaps = 17/336 (5%) Query 31 WDGVAVELGLAATGYASVIAELTGAPWVGAASLSMVAAATPYVAWLSQAAARAEQAGMQA 90 WDGVAVELGLAATGYASVIAELTGAPWVGAASLSMVAAATPYVAWLSQAAARAEQAGMQA Sbjct 7 WDGVAVELGLAATGYASVIAELTGAPWVGAASLSMVAAATPYVAWLSQAAARAEQAGMQA 66 Query 91 AAAAAAYEAAFVMTVPPPVITANRVLVMTLIATNFFGQNSAAIAVAEAQYAEMWAQDAVA 150 AAAAAAYEAAFVMTVPPPVITANRVLVMTLIATNFFGQNSAAIAVAEAQYAEMWAQDAVA Sbjct 67 AAAAAAYEAAFVMTVPPPVITANRVLVMTLIATNFFGQNSAAIAVAEAQYAEMWAQDAVA 126 Query 151 MYGYAAASASASRLIPFAAPPKTTNSAGVVAQVAAVAAMPGLLQRLSSAASVSWSNPNDW 210 MYGYAAASASASRLIPFAAPPKTTNSAGVVAQ + ASVSW NPNDW Sbjct 127 MYGYAAASASASRLIPFAAPPKTTNSAGVVAQ---------------AVASVSWPNPNDW 171 Query 211 WLVRLLGSITPTERTTIVRLLGQSYFATGMAQFFASIAQQLTFGPGGTTAGSGGAWYPTP 270 WLVRLLGSITPTERTTIVRLLGQSY ATGMA+F SIAQQLTFGPGGTTAGSGGAWYPTP Sbjct 172 WLVRLLGSITPTERTTIVRLLGQSYLATGMARFLTSIAQQLTFGPGGTTAGSGGAWYPTP 231 Query 271 QFAGLGASRAVSASLARANKIGALSVPPSW-VKTTALTESPVAHAVSANPTVGSSHGPHG 329 QFAGLGA AVSASLARA +G LSVPPSW V A E P A + SS G G Sbjct 232 QFAGLGAGPAVSASLARAEPVGRLSVPPSWAVAAPAFAEKPEAGTPMSVIGEASSCGQGG 291 Query 330 LLRGLPLGSRITRRSGAFAHRYGFRHSVVARPPSAG 365 LLRG+PL +R RR+GAFAHRYGFRHSV+ R PSAG Sbjct 292 LLRGIPL-ARAGRRTGAFAHRYGFRHSVITRSPSAG 326 >gi|323719668|gb|EGB28789.1| PPE family protein [Mycobacterium tuberculosis CDC1551A] Length=315 Score = 422 bits (1086), Expect = 3e-116, Method: Compositional matrix adjust. Identities = 272/331 (83%), Positives = 281/331 (85%), Gaps = 17/331 (5%) Query 36 VELGLAATGYASVIAELTGAPWVGAASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAA 95 +ELGLAATGYASVIAELTGAPWVGAASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAA Sbjct 1 MELGLAATGYASVIAELTGAPWVGAASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAA 60 Query 96 AYEAAFVMTVPPPVITANRVLVMTLIATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYA 155 AYEAAFVMTVPPPVITANRVLVMTLIATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYA Sbjct 61 AYEAAFVMTVPPPVITANRVLVMTLIATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYA 120 Query 156 AASASASRLIPFAAPPKTTNSAGVVAQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRL 215 AASASASRLIPFAAPPKTTNSAGVVAQ + ASVSW NPNDWWLVRL Sbjct 121 AASASASRLIPFAAPPKTTNSAGVVAQ---------------AVASVSWPNPNDWWLVRL 165 Query 216 LGSITPTERTTIVRLLGQSYFATGMAQFFASIAQQLTFGPGGTTAGSGGAWYPTPQFAGL 275 LGSITPTERTTIVRLLGQSY ATGMA+F SIAQQLTFGPGGTTAGSGGAWYPTPQFAGL Sbjct 166 LGSITPTERTTIVRLLGQSYLATGMARFLTSIAQQLTFGPGGTTAGSGGAWYPTPQFAGL 225 Query 276 GASRAVSASLARANKIGALSVPPSW-VKTTALTESPVAHAVSANPTVGSSHGPHGLLRGL 334 GA AVSASLARA +G LSVPPSW V A E P A + SS G GLLRG+ Sbjct 226 GAGPAVSASLARAEPVGRLSVPPSWAVAAPAFAEKPEAGTPMSVIGEASSCGQGGLLRGI 285 Query 335 PLGSRITRRSGAFAHRYGFRHSVVARPPSAG 365 PL +R RR+GAFAHRYGFRHSV+ R PSAG Sbjct 286 PL-ARAGRRTGAFAHRYGFRHSVITRSPSAG 315 >gi|307079826|ref|ZP_07488996.1| putative PPE family protein [Mycobacterium tuberculosis SUMu011] gi|308362315|gb|EFP51166.1| putative PPE family protein [Mycobacterium tuberculosis SUMu011] Length=309 Score = 410 bits (1053), Expect = 2e-112, Method: Compositional matrix adjust. Identities = 265/323 (83%), Positives = 273/323 (85%), Gaps = 17/323 (5%) Query 44 GYASVIAELTGAPWVGAASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVM 103 GYASVIAELTGAPWVGAASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVM Sbjct 3 GYASVIAELTGAPWVGAASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVM 62 Query 104 TVPPPVITANRVLVMTLIATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASR 163 TVPPPVITANRVLVMTLIATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASR Sbjct 63 TVPPPVITANRVLVMTLIATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASR 122 Query 164 LIPFAAPPKTTNSAGVVAQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTE 223 LIPFAAPPKTTNSAGVVAQ + ASVSW NPNDWWLVRLLGSITPTE Sbjct 123 LIPFAAPPKTTNSAGVVAQ---------------AVASVSWPNPNDWWLVRLLGSITPTE 167 Query 224 RTTIVRLLGQSYFATGMAQFFASIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVSA 283 RTTIVRLLGQSY ATGMA+F SIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGA AVSA Sbjct 168 RTTIVRLLGQSYLATGMARFLTSIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGAGPAVSA 227 Query 284 SLARANKIGALSVPPSW-VKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITR 342 SLARA +G LSVPPSW V A E P A + SS G GLLRG+PL +R R Sbjct 228 SLARAEPVGRLSVPPSWAVAAPAFAEKPEAGTPMSVIGEASSCGQGGLLRGIPL-ARAGR 286 Query 343 RSGAFAHRYGFRHSVVARPPSAG 365 R+GAFAHRYGFRHSV+ R PSAG Sbjct 287 RTGAFAHRYGFRHSVITRSPSAG 309 >gi|306776004|ref|ZP_07414341.1| PPE family protein [Mycobacterium tuberculosis SUMu001] gi|308215537|gb|EFO74936.1| PPE family protein [Mycobacterium tuberculosis SUMu001] Length=315 Score = 409 bits (1050), Expect = 5e-112, Method: Compositional matrix adjust. Identities = 265/323 (83%), Positives = 273/323 (85%), Gaps = 17/323 (5%) Query 44 GYASVIAELTGAPWVGAASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVM 103 GYASVIAELTGAPWVGAASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVM Sbjct 9 GYASVIAELTGAPWVGAASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVM 68 Query 104 TVPPPVITANRVLVMTLIATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASR 163 TVPPPVITANRVLVMTLIATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASR Sbjct 69 TVPPPVITANRVLVMTLIATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASR 128 Query 164 LIPFAAPPKTTNSAGVVAQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTE 223 LIPFAAPPKTTNSAGVVAQ + ASVSW NPNDWWLVRLLGSITPTE Sbjct 129 LIPFAAPPKTTNSAGVVAQ---------------AVASVSWPNPNDWWLVRLLGSITPTE 173 Query 224 RTTIVRLLGQSYFATGMAQFFASIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVSA 283 RTTIVRLLGQSY ATGMA+F SIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGA AVSA Sbjct 174 RTTIVRLLGQSYLATGMARFLTSIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGAGPAVSA 233 Query 284 SLARANKIGALSVPPSW-VKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITR 342 SLARA +G LSVPPSW V A E P A + SS G GLLRG+PL +R R Sbjct 234 SLARAEPVGRLSVPPSWAVAAPAFAEKPEAGTPMSVIGEASSCGQGGLLRGIPL-ARAGR 292 Query 343 RSGAFAHRYGFRHSVVARPPSAG 365 R+GAFAHRYGFRHSV+ R PSAG Sbjct 293 RTGAFAHRYGFRHSVITRSPSAG 315 >gi|308402073|ref|ZP_07493516.2| hypothetical protein TMLG_01060 [Mycobacterium tuberculosis SUMu012] gi|308365994|gb|EFP54845.1| hypothetical protein TMLG_01060 [Mycobacterium tuberculosis SUMu012] Length=263 Score = 345 bits (885), Expect = 6e-93, Method: Compositional matrix adjust. Identities = 221/279 (80%), Positives = 229/279 (83%), Gaps = 17/279 (6%) Query 88 MQAAAAAAAYEAAFVMTVPPPVITANRVLVMTLIATNFFGQNSAAIAVAEAQYAEMWAQD 147 MQAAAAAAAYEAAFVMTVPPPVITANRVLVMTLIATNFFGQNSAAIAVAEAQYAEMWAQD Sbjct 1 MQAAAAAAAYEAAFVMTVPPPVITANRVLVMTLIATNFFGQNSAAIAVAEAQYAEMWAQD 60 Query 148 AVAMYGYAAASASASRLIPFAAPPKTTNSAGVVAQVAAVAAMPGLLQRLSSAASVSWSNP 207 AVAMYGYAAASASASRLIPFAAPPKTTNSAGVVAQ + ASVSW NP Sbjct 61 AVAMYGYAAASASASRLIPFAAPPKTTNSAGVVAQ---------------AVASVSWPNP 105 Query 208 NDWWLVRLLGSITPTERTTIVRLLGQSYFATGMAQFFASIAQQLTFGPGGTTAGSGGAWY 267 NDWWLVRLLGSITPTERTTIVRLLGQSY ATGMA+F SIAQQLTFGPGGTTAGSGGAWY Sbjct 106 NDWWLVRLLGSITPTERTTIVRLLGQSYLATGMARFLTSIAQQLTFGPGGTTAGSGGAWY 165 Query 268 PTPQFAGLGASRAVSASLARANKIGALSVPPSW-VKTTALTESPVAHAVSANPTVGSSHG 326 PTPQFAGLGA AVSASLARA +G LSVPPSW V A E P A + SS G Sbjct 166 PTPQFAGLGAGPAVSASLARAEPVGRLSVPPSWAVAAPAFAEKPEAGTPMSVIGEASSCG 225 Query 327 PHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVARPPSAG 365 GLLRG+PL +R RR+GAFAHRYGFRHSV+ R PSAG Sbjct 226 QGGLLRGIPL-ARAGRRTGAFAHRYGFRHSVITRSPSAG 263 >gi|289447405|ref|ZP_06437149.1| PPE family protein [Mycobacterium tuberculosis CPHL_A] gi|289420363|gb|EFD17564.1| PPE family protein [Mycobacterium tuberculosis CPHL_A] Length=334 Score = 345 bits (885), Expect = 7e-93, Method: Compositional matrix adjust. Identities = 208/266 (79%), Positives = 216/266 (82%), Gaps = 17/266 (6%) Query 101 FVMTVPPPVITANRVLVMTLIATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASAS 160 FVMTVPPPVITANRVLVMTLIATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASAS Sbjct 85 FVMTVPPPVITANRVLVMTLIATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASAS 144 Query 161 ASRLIPFAAPPKTTNSAGVVAQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSIT 220 ASRLIPFAAPPKTTNSAGVVAQ + ASVSW NPNDWWLVRLLGSIT Sbjct 145 ASRLIPFAAPPKTTNSAGVVAQ---------------AVASVSWPNPNDWWLVRLLGSIT 189 Query 221 PTERTTIVRLLGQSYFATGMAQFFASIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRA 280 PTERTTIVRLLGQSY ATGMA+F SIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGA A Sbjct 190 PTERTTIVRLLGQSYLATGMARFLTSIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGAGPA 249 Query 281 VSASLARANKIGALSVPPSW-VKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSR 339 VSASLARA +G LSVPPSW V A E P A + SS G GLLRG+PL +R Sbjct 250 VSASLARAEPVGRLSVPPSWAVAAPAFAEKPEAGTPMSVIGEASSCGQGGLLRGIPL-AR 308 Query 340 ITRRSGAFAHRYGFRHSVVARPPSAG 365 RR+GAFAHRYGFRHSV+ R PSAG Sbjct 309 AGRRTGAFAHRYGFRHSVITRSPSAG 334 >gi|306972073|ref|ZP_07484734.1| putative PPE family protein [Mycobacterium tuberculosis SUMu010] gi|308358453|gb|EFP47304.1| putative PPE family protein [Mycobacterium tuberculosis SUMu010] Length=179 Score = 342 bits (877), Expect = 5e-92, Method: Compositional matrix adjust. Identities = 178/179 (99%), Positives = 179/179 (100%), Gaps = 0/179 (0%) Query 1 LDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 +DFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA Sbjct 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 Query 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL Sbjct 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 Query 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGV 179 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGV Sbjct 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGV 179 >gi|306775987|ref|ZP_07414324.1| putative PPE family protein [Mycobacterium tuberculosis SUMu001] gi|308215557|gb|EFO74956.1| putative PPE family protein [Mycobacterium tuberculosis SUMu001] Length=174 Score = 332 bits (852), Expect = 5e-89, Method: Compositional matrix adjust. Identities = 174/174 (100%), Positives = 174/174 (100%), Gaps = 0/174 (0%) Query 7 PPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGAASLSMV 66 PPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGAASLSMV Sbjct 1 PPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGAASLSMV 60 Query 67 AAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTLIATNFF 126 AAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTLIATNFF Sbjct 61 AAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTLIATNFF 120 Query 127 GQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 GQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV Sbjct 121 GQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 174 >gi|323719699|gb|EGB28819.1| PPE family protein [Mycobacterium tuberculosis CDC1551A] Length=186 Score = 330 bits (847), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 172/173 (99%), Positives = 173/173 (100%), Gaps = 0/173 (0%) Query 1 LDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 +DFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA Sbjct 14 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 73 Query 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL Sbjct 74 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 133 Query 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKT 173 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKT Sbjct 134 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKT 186 >gi|240172020|ref|ZP_04750679.1| PPE family protein [Mycobacterium kansasii ATCC 12478] Length=378 Score = 321 bits (823), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 234/379 (62%), Positives = 266/379 (71%), Gaps = 29/379 (7%) Query 15 MYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGAASLSMVAAATPYVA 74 MY GPGSG M+AAAAAWD +A EL AA+GY SVIAELTG+PW+G ASLSMVAAA PY+A Sbjct 1 MYAGPGSGSMMAAAAAWDDLAAELASAASGYESVIAELTGSPWMGPASLSMVAAARPYIA 60 Query 75 WLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTLIATNFFGQNSAAIA 134 WLS A+A AEQAGMQ AAAAAYE AFVMTVPPP I ANR+L+MTLIATNFFGQN+ AIA Sbjct 61 WLSGASALAEQAGMQGRAAAAAYETAFVMTVPPPAIAANRLLLMTLIATNFFGQNTPAIA 120 Query 135 VAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVVAQ------------ 182 EA YAEMWAQDA AMYGYA ASA+AS L PFA P TT+ AG+ AQ Sbjct 121 ATEAHYAEMWAQDAAAMYGYAGASATASELTPFADPGTTTDPAGLAAQSAAVAKAAATPA 180 Query 183 -------------VAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVR 229 + + AA+P LLQ+LS++ NPNDWW+V+ LGSI +R ++VR Sbjct 181 GTSAPALSSADPGLVSTAAVPQLLQQLSTSTLAGSLNPNDWWIVQTLGSINSAQRVSVVR 240 Query 230 LLGQSYFATGMAQFFASIAQQLTFGPGGTTAGSGGAWYPTPQF---AGLGASRAVSASLA 286 LG SYFA G+ QF ASI QQLTFG GTTAGSGGAWY TPQF A SASLA Sbjct 241 TLGLSYFAMGIPQFIASIGQQLTFG-SGTTAGSGGAWYATPQFAGLGTGAGRAAASASLA 299 Query 287 RANKIGALSVPPSWVKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITRRSGA 346 ANKIGALSVPP+WV ++A E A VSA+ S G GLLRG+PLGS RR G Sbjct 300 SANKIGALSVPPTWVGSSAEVERAAAGLVSADVGTNSQGGVQGLLRGIPLGSGAARRGGG 359 Query 347 FAHRYGFRHSVVARPPSAG 365 HRYGFR+SV+ RPPSAG Sbjct 360 IGHRYGFRYSVLTRPPSAG 378 >gi|307079781|ref|ZP_07488951.1| putative PPE family protein [Mycobacterium tuberculosis SUMu011] gi|308362377|gb|EFP51228.1| putative PPE family protein [Mycobacterium tuberculosis SUMu011] Length=170 Score = 320 bits (821), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 169/170 (99%), Positives = 170/170 (100%), Gaps = 0/170 (0%) Query 12 SGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGAASLSMVAAATP 71 SGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGAASLSMVAAATP Sbjct 1 SGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGAASLSMVAAATP 60 Query 72 YVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTLIATNFFGQNSA 131 YVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTLIATNFFGQNSA Sbjct 61 YVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTLIATNFFGQNSA 120 Query 132 AIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVVA 181 AIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPK+TNSAGVVA Sbjct 121 AIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKSTNSAGVVA 170 >gi|323719408|gb|EGB28541.1| PPE family protein [Mycobacterium tuberculosis CDC1551A] Length=166 Score = 315 bits (806), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 166/166 (100%), Positives = 166/166 (100%), Gaps = 0/166 (0%) Query 15 MYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGAASLSMVAAATPYVA 74 MYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGAASLSMVAAATPYVA Sbjct 1 MYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGAASLSMVAAATPYVA 60 Query 75 WLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTLIATNFFGQNSAAIA 134 WLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTLIATNFFGQNSAAIA Sbjct 61 WLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTLIATNFFGQNSAAIA 120 Query 135 VAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 VAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV Sbjct 121 VAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 166 >gi|342861307|ref|ZP_08717955.1| PPE family protein [Mycobacterium colombiense CECT 3035] gi|342131207|gb|EGT84488.1| PPE family protein [Mycobacterium colombiense CECT 3035] Length=417 Score = 305 bits (782), Expect = 6e-81, Method: Compositional matrix adjust. Identities = 221/422 (53%), Positives = 270/422 (64%), Gaps = 62/422 (14%) Query 1 LDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 +DFGALPPEINSGRMY GPGSGPM+AAAAAWDG+ EL AA+GY SVI+ELT APWVG Sbjct 1 MDFGALPPEINSGRMYAGPGSGPMMAAAAAWDGLGAELSSAASGYTSVISELTHAPWVGP 60 Query 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 AS SM++A TPYV+WLS AA+AE+ QA AAAAA+EAAF MTVPPPVI ANRVL+ L Sbjct 61 ASSSMLSAVTPYVSWLSVLAAQAEETAGQARAAAAAFEAAFAMTVPPPVIAANRVLLANL 120 Query 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTT------ 174 +ATNF GQN+ AIA EAQY EMWAQDA AMYGYA +SA AS L P +PP TT Sbjct 121 VATNFLGQNTPAIAATEAQYMEMWAQDAAAMYGYAGSSAVASELPPLTSPPNTTTPEADS 180 Query 175 -----------NSAGVVAQVAAVAAMPGLLQRLSSAAS---------VSWSNPNDW-WLV 213 AG AQ + A P Q LS+ A+ + + P + WL Sbjct 181 DQAAAVAKAVAEPAGNTAQTTSQLATP---QALSAGATQAVTQASTTTTATQPGPFTWLQ 237 Query 214 RLL------GSITPTER----------TTIVRLLGQSYFATGMAQFFASIAQQLTFGPGG 257 L+ G TPT T + + G +YF+TG+ F++SIAQQLTFGPGG Sbjct 238 NLINGFLTSGLPTPTNNYAGLNTGMYGTLLKQTTGLAYFSTGITSFWSSIAQQLTFGPGG 297 Query 258 TTAGSGGAWYPTPQFAGLGASR--------AVSASLARANKIGALSVPPSWVKTTALTES 309 TTAG+GGAW+PTPQFA LG AVSA + +A ++G LSVP W T+ + S Sbjct 298 TTAGAGGAWFPTPQFASLGLGNLGGVGHVGAVSAGVGQAGRVGMLSVPQHWATLTS-SVS 356 Query 310 PVAHAVSANPT---VGSSHGP-HGLLRGLPLGSRITRRSGA--FAHRYGFRHSVVARPPS 363 P A + A P G ++ P +GLLRG+P+GS I RR A + ++YGFR+SV+ RPPS Sbjct 357 PAALSEEATPIQAAAGGANSPANGLLRGMPVGS-IGRRGAAAGYVNKYGFRYSVLTRPPS 415 Query 364 AG 365 AG Sbjct 416 AG 417 >gi|296164778|ref|ZP_06847340.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295899879|gb|EFG79323.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=411 Score = 303 bits (775), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 204/416 (50%), Positives = 250/416 (61%), Gaps = 57/416 (13%) Query 1 LDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 DFGALPPEINSGRMY GPGSGPM+ AAAAWD +A ELG AA+GY S+I ELT PWVG Sbjct 2 FDFGALPPEINSGRMYAGPGSGPMMVAAAAWDVLAAELGTAASGYNSIIDELTNGPWVGP 61 Query 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 AS SM+AA TPYV+WL+ A +AE+ A AAAAA+EAAF MTVPPPVI ANRVL+ TL Sbjct 62 ASTSMIAAVTPYVSWLTTIAGQAEETAGHARAAAAAFEAAFAMTVPPPVIAANRVLLATL 121 Query 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 +ATNFFGQN+ AI EAQY EMWAQDA AMYGYAA+S +AS++ PF+A P+TT G Sbjct 122 VATNFFGQNTPAIMATEAQYMEMWAQDAAAMYGYAASSTTASQMTPFSAAPQTTTPDGES 181 Query 181 AQVAAV-----------------------------AAMPGLLQRLSSAASVSWS------ 205 Q AAV A P Q++ +A + + Sbjct 182 QQFAAVTQATTQQAGNTAQTVSNTSSQLATPQVLSATAPQTAQQVITAGTAPTTGSVQDV 241 Query 206 --NPNDWWLVRLLGSITPTERTTIVRLLGQSYFATGMAQFFASIAQQLTFGPGGTTAGSG 263 +P +WW S+TP T I++ Q+YF G+ F SI QQLTFGPGG+T GS Sbjct 242 LPSPTNWW------SLTPGNYTAIIKQTLQAYFGVGIGNFGWSIGQQLTFGPGGSTVGSA 295 Query 264 GAWYPTPQFA---------GLGASRAVSASLARANKIGALSVPPSWVKTTALTESPVAHA 314 G W+PTPQFA A AV+A +A ++G LSVP W + A Sbjct 296 GTWFPTPQFAQLGLGNLGSLGNAGGAVTAGAGQAAQVGGLSVPQQWATLASSVSPAEATD 355 Query 315 VSANP--TVGSSHGP-HGLLRGLPL--GSRITRRSGAFAHRYGFRHSVVARPPSAG 365 V A P TV +S P + LLRG+P R + + H+YGFR+SV+ RPPSAG Sbjct 356 VEAAPIQTVSASSPPGNALLRGMPTGAMGRRAGAAAGYTHKYGFRYSVLTRPPSAG 411 >gi|340627882|ref|YP_004746334.1| PPE family protein [Mycobacterium canettii CIPT 140010059] gi|340006072|emb|CCC45244.1| PPE family protein [Mycobacterium canettii CIPT 140010059] Length=408 Score = 290 bits (742), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 209/411 (51%), Positives = 245/411 (60%), Gaps = 49/411 (11%) Query 1 LDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 +DFG LPPEINSGRMY GPGSGPM+AAAAAWD +A ELGLAA GY I+ELTGA WVG Sbjct 1 MDFGVLPPEINSGRMYAGPGSGPMMAAAAAWDSLAAELGLAAGGYRLAISELTGAYWVGP 60 Query 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 A+ SMVAA TPYVAWLS A +AEQAGMQA AAAAAYE AF MTVPPPV+ ANR L++ L Sbjct 61 AAASMVAAVTPYVAWLSATAGQAEQAGMQARAAAAAYELAFAMTVPPPVVVANRALLVAL 120 Query 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNS---- 176 +ATNFFGQN+ AIA EAQYAEMWAQDA AMY YA ++A A+ L PF P TT+ Sbjct 121 VATNFFGQNTPAIAATEAQYAEMWAQDAAAMYTYAGSAAIATELTPFTPAPVTTSPAALA 180 Query 177 -------AGVVAQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVR 229 + V VA AA+P LLQ+LSS + + W + WL L +TP R TIVR Sbjct 181 GQAAATVSSTVPPVATTAAVPQLLQQLSSTSLIPWYSALQQWLAENLLGLTPDNRMTIVR 240 Query 230 LLGQSYFATGMAQFFASIAQQLTFG-PGGTTAGSGG-----AWYPTPQFAGLGASR---- 279 LLG SYF G+ QF AS+AQQ G PGG AG G +W PT FAG AS Sbjct 241 LLGISYFDEGLLQFEASLAQQAIPGTPGG--AGDSGSSVLDSWGPT-IFAGPRASPSVAG 297 Query 280 -------------------------AVSASLARANKIGALSVPPSWVKTTALTESPVAHA 314 +VSA+L + + G+LSVPP W Sbjct 298 GGAVGGVQTPQPYWYWALDRESIGGSVSAALGKGSSAGSLSVPPDWAARARWANPAAWRL 357 Query 315 VSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVARPPSAG 365 + T + LLRG P+ S G F H+YGFR +V+ RPP AG Sbjct 358 PGDDVTALRGTAENALLRGFPMASAGQSTGGGFVHKYGFRLAVMQRPPFAG 408 >gi|15842434|ref|NP_337471.1| PPE family protein [Mycobacterium tuberculosis CDC1551] gi|31794068|ref|NP_856561.1| PPE family protein [Mycobacterium bovis AF2122/97] gi|57117034|ref|YP_177913.1| PPE family protein [Mycobacterium tuberculosis H37Rv] 28 more sequence titles Length=408 Score = 289 bits (740), Expect = 5e-76, Method: Compositional matrix adjust. Identities = 208/411 (51%), Positives = 245/411 (60%), Gaps = 49/411 (11%) Query 1 LDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 +DFG LPPEINSGRMY GPGSGPM+AAAAAWD +A ELGLAA GY I+ELTGA W G Sbjct 1 MDFGVLPPEINSGRMYAGPGSGPMMAAAAAWDSLAAELGLAAGGYRLAISELTGAYWAGP 60 Query 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 A+ SMVAA TPYVAWLS A +AEQAGMQA AAAAAYE AF MTVPPPV+ ANR L++ L Sbjct 61 AAASMVAAVTPYVAWLSATAGQAEQAGMQARAAAAAYELAFAMTVPPPVVVANRALLVAL 120 Query 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNS---- 176 +ATNFFGQN+ AIA EAQYAEMWAQDA AMY YA ++A A+ L PF A P TT+ Sbjct 121 VATNFFGQNTPAIAATEAQYAEMWAQDAAAMYAYAGSAAIATELTPFTAAPVTTSPAALA 180 Query 177 -------AGVVAQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVR 229 + V +A AA+P LLQ+LSS + + W + WL L +TP R TIVR Sbjct 181 GQAAATVSSTVPPLATTAAVPQLLQQLSSTSLIPWYSALQQWLAENLLGLTPDNRMTIVR 240 Query 230 LLGQSYFATGMAQFFASIAQQLTFG-PGGTTAGSGG-----AWYPTPQFAGLGASR---- 279 LLG SYF G+ QF AS+AQQ G PGG AG G +W PT FAG AS Sbjct 241 LLGISYFDEGLLQFEASLAQQAIPGTPGG--AGDSGSSVLDSWGPT-IFAGPRASPSVAG 297 Query 280 -------------------------AVSASLARANKIGALSVPPSWVKTTALTESPVAHA 314 +VSA+L + + G+LSVPP W Sbjct 298 GGAVGGVQTPQPYWYWALDRESIGGSVSAALGKGSSAGSLSVPPDWAARARWANPAAWRL 357 Query 315 VSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVARPPSAG 365 + T + LLRG P+ S G F H+YGFR +V+ RPP AG Sbjct 358 PGDDVTALRGTAENALLRGFPMASAGQSTGGGFVHKYGFRLAVMQRPPFAG 408 >gi|298526361|ref|ZP_07013770.1| PPE family protein [Mycobacterium tuberculosis 94_M4241A] gi|298496155|gb|EFI31449.1| PPE family protein [Mycobacterium tuberculosis 94_M4241A] Length=408 Score = 285 bits (730), Expect = 7e-75, Method: Compositional matrix adjust. Identities = 207/411 (51%), Positives = 244/411 (60%), Gaps = 49/411 (11%) Query 1 LDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 +DFG LPPEINSGRMY GPGSGPM+AAAAAWD +A ELGLAA GY I+ELTGA W G Sbjct 1 MDFGVLPPEINSGRMYAGPGSGPMMAAAAAWDSLAAELGLAAGGYRLAISELTGAYWAGP 60 Query 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 A+ SMVAA TPYVAWLS A +AEQAGMQA AAAAAYE AF MTVP PV+ ANR L++ L Sbjct 61 AAASMVAAVTPYVAWLSATAGQAEQAGMQARAAAAAYELAFAMTVPLPVVVANRALLVAL 120 Query 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNS---- 176 +ATNFFGQN+ AIA EAQYAEMWAQDA AMY YA ++A A+ L PF A P TT+ Sbjct 121 VATNFFGQNTPAIAATEAQYAEMWAQDAAAMYAYAGSAAIATELTPFTAAPVTTSPAALA 180 Query 177 -------AGVVAQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVR 229 + V +A AA+P LLQ+LSS + + W + WL L +TP R TIVR Sbjct 181 GQAAATVSSTVPPLATTAAVPQLLQQLSSTSLIPWYSALQQWLAENLLGLTPDNRMTIVR 240 Query 230 LLGQSYFATGMAQFFASIAQQLTFG-PGGTTAGSGG-----AWYPTPQFAGLGASR---- 279 LLG SYF G+ QF AS+AQQ G PGG AG G +W PT FAG AS Sbjct 241 LLGISYFDEGLLQFEASLAQQAIPGTPGG--AGDSGSSVLDSWGPT-IFAGPRASPSVAG 297 Query 280 -------------------------AVSASLARANKIGALSVPPSWVKTTALTESPVAHA 314 +VSA+L + + G+LSVPP W Sbjct 298 GGAVGGVQTPQPYWYWALDRESIGGSVSAALGKGSSAGSLSVPPDWAARARWANPAAWRL 357 Query 315 VSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVARPPSAG 365 + T + LLRG P+ S G F H+YGFR +V+ RPP AG Sbjct 358 PGDDVTALRGTAENALLRGFPMASAGQSTGGGFVHKYGFRLAVMQRPPFAG 408 >gi|212596596|gb|ACJ35591.1| PPE24 [Mycobacterium intracellulare ATCC 13950] Length=403 Score = 281 bits (720), Expect = 9e-74, Method: Compositional matrix adjust. Identities = 214/406 (53%), Positives = 258/406 (64%), Gaps = 45/406 (11%) Query 1 LDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 LDFGALPPEINSGRMY GPGSGPM+AAAAAWD +A E+G+AA GY SV+ EL PWVG Sbjct 2 LDFGALPPEINSGRMYAGPGSGPMMAAAAAWDEIAAEVGVAANGYNSVVTELISGPWVGP 61 Query 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 AS+SM++A P+++WLS AA+AE+A Q AAAA+EAAF MTVPPPVI NRVL+ L Sbjct 62 ASISMISAIAPFISWLSAVAAQAEEAASQGRVAAAAFEAAFAMTVPPPVIAVNRVLLANL 121 Query 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTT------ 174 IATNFFGQN+ AIA EAQY EMWAQDAVAMYGYAA+SA AS L PFA PPKT+ Sbjct 122 IATNFFGQNTPAIAATEAQYMEMWAQDAVAMYGYAASSAMASELAPFAPPPKTSTPDASS 181 Query 175 -----------NSAGVVAQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSIT--- 220 AG AQ + A P Q LS AS + P G+ T Sbjct 182 KQAAAVAKAVAEPAGNTAQNTSQVASP---QALSLNASQATQAPTTATNAASTGTTTSLK 238 Query 221 -----PTERTTIV-RLLGQSYFATGMAQFFASIAQQLTFGPGGTTAGSGGAWYPTPQFAG 274 PT TI R G +YF+ GM QF +SIAQQLTFGPGG+TAG+GGAW+PTPQFA Sbjct 239 NIFGDPTFNDTIFKRTTGLAYFSNGMGQFASSIAQQLTFGPGGSTAGAGGAWFPTPQFAN 298 Query 275 LGAS---------RAVSASLARANKIGALSVPPSWVKTTALTESPVAHAVSANPT----V 321 LG V+AS +A +IG LSVP W T+ + A P Sbjct 299 LGLGNLGGGAGHLSGVTASAGQAARIGTLSVPQHWATLTSAVTPATVPDLEATPVQAAAT 358 Query 322 GSSHGPHGLLRGLPLGSRITRR--SGAFAHRYGFRHSVVARPPSAG 365 G++ +GLLRG+P G+ + RR +G + ++YGFR+SV+ RPPSAG Sbjct 359 GTTGPANGLLRGMPAGA-LGRRGAAGGYVNKYGFRYSVLTRPPSAG 403 >gi|253798020|ref|YP_003031021.1| PPE family protein [Mycobacterium tuberculosis KZN 1435] gi|289553319|ref|ZP_06442529.1| PPE family protein [Mycobacterium tuberculosis KZN 605] gi|289755004|ref|ZP_06514382.1| PPE family protein [Mycobacterium tuberculosis EAS054] 30 more sequence titles Length=404 Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 205/406 (51%), Positives = 241/406 (60%), Gaps = 49/406 (12%) Query 6 LPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGAASLSM 65 LPPEINSGRMY GPGSGPM+AAAAAWD +A ELGLAA GY I+ELTGA W G A+ SM Sbjct 2 LPPEINSGRMYAGPGSGPMMAAAAAWDSLAAELGLAAGGYRLAISELTGAYWAGPAAASM 61 Query 66 VAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTLIATNF 125 VAA TPYVAWLS A +AEQAGMQA AAAAAYE AF MTVPPPV+ ANR L++ L+ATNF Sbjct 62 VAAVTPYVAWLSATAGQAEQAGMQARAAAAAYELAFAMTVPPPVVVANRALLVALVATNF 121 Query 126 FGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNS--------- 176 FGQN+ AIA EAQYAEMWAQDA AMY YA ++A A+ L PF A P TT+ Sbjct 122 FGQNTPAIAATEAQYAEMWAQDAAAMYAYAGSAAIATELTPFTAAPVTTSPAALAGQAAA 181 Query 177 --AGVVAQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQS 234 + V +A AA+P LLQ+LSS + + W + WL L +TP R TIVRLLG S Sbjct 182 TVSSTVPPLATTAAVPQLLQQLSSTSLIPWYSALQQWLAENLLGLTPDNRMTIVRLLGIS 241 Query 235 YFATGMAQFFASIAQQLTFG-PGGTTAGSGG-----AWYPTPQFAGLGASR--------- 279 YF G+ QF AS+AQQ G PGG AG G +W PT FAG AS Sbjct 242 YFDEGLLQFEASLAQQAIPGTPGG--AGDSGSSVLDSWGPT-IFAGPRASPSVAGGGAVG 298 Query 280 --------------------AVSASLARANKIGALSVPPSWVKTTALTESPVAHAVSANP 319 +VSA+L + + G+LSVPP W + Sbjct 299 GVQTPQPYWYWALDRESIGGSVSAALGKGSSAGSLSVPPDWAARARWANPAAWRLPGDDV 358 Query 320 TVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVARPPSAG 365 T + LLRG P+ S G F H+YGFR +V+ RPP AG Sbjct 359 TALRGTAENALLRGFPMASAGQSTGGGFVHKYGFRLAVMQRPPFAG 404 >gi|339295729|gb|AEJ47840.1| PPE family protein [Mycobacterium tuberculosis CCDC5079] Length=404 Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 210/408 (52%), Positives = 248/408 (61%), Gaps = 53/408 (12%) Query 6 LPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGAASLSM 65 LPPEINSGRMY GPGSGPM+AAAAAWD +A ELGLAA GY I+ELTGA W G A+ SM Sbjct 2 LPPEINSGRMYAGPGSGPMMAAAAAWDSLAAELGLAAGGYRLAISELTGAYWAGPAAASM 61 Query 66 VAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTLIATNF 125 VAA TPYVAWLS A +AEQAGMQA AAAAAYE AF MTVPPPV+ ANR L++ L+ATNF Sbjct 62 VAAVTPYVAWLSATAGQAEQAGMQARAAAAAYELAFAMTVPPPVVVANRALLVALVATNF 121 Query 126 FGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNS--------- 176 FGQN+ AIA EAQYAEMWAQDA AMY YA ++A A+ L PF A P TT+ Sbjct 122 FGQNTPAIAATEAQYAEMWAQDAAAMYAYAGSAAIATELTPFTAAPVTTSPAALAGQAAA 181 Query 177 --AGVVAQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQS 234 + V +A AA+P LLQ+LSS + + W + WL L +TP R TIVRLLG S Sbjct 182 TVSSTVPPLATTAAVPQLLQQLSSTSLIPWYSALQQWLAENLLGLTPDNRMTIVRLLGIS 241 Query 235 YFATGMAQFFASIAQQLTFG-PGGTTAGSGG-----AWYPTPQFAGLGASR--------- 279 YF G+ QF AS+AQQ G PGG AG G +W PT FAG AS Sbjct 242 YFDEGLLQFEASLAQQAIPGTPGG--AGDSGSSVLDSWGPT-IFAGPRASPSVAGGGAVG 298 Query 280 --------------------AVSASLARANKIGALSVPPSWVKTTALTESPVAHAVSANP 319 +VSA+L + + G+LSVPP W A +P A + + Sbjct 299 GVQTPQPYWYWALDRESIGGSVSAALGKGSSAGSLSVPPDWAA-RARWANPAAWRLPGD- 356 Query 320 TVGSSHGPHG--LLRGLPLGSRITRRSGAFAHRYGFRHSVVARPPSAG 365 V + G G LLRG P+ S G F H+YGFR +V+ RPP AG Sbjct 357 DVTALRGTAGNALLRGFPMASAGQSTGGGFVHKYGFRLAVMQRPPFAG 404 Lambda K H 0.317 0.127 0.383 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 688239003200 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40