BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1789 Length=393 Score E Sequences producing significant alignments: (Bits) Value gi|57116911|ref|YP_177835.1| PPE family protein [Mycobacterium t... 741 0.0 gi|15841257|ref|NP_336294.1| PPE family protein [Mycobacterium t... 741 0.0 gi|31792977|ref|NP_855470.1| PPE family protein [Mycobacterium b... 740 0.0 gi|289569854|ref|ZP_06450081.1| PPE family protein [Mycobacteriu... 740 0.0 gi|289745779|ref|ZP_06505157.1| PPE family protein [Mycobacteriu... 740 0.0 gi|254364621|ref|ZP_04980667.1| PPE family protein [Mycobacteriu... 543 2e-152 gi|340626801|ref|YP_004745253.1| PPE family protein [Mycobacteri... 516 3e-144 gi|183981917|ref|YP_001850208.1| PPE family protein [Mycobacteri... 382 4e-104 gi|296167733|ref|ZP_06849950.1| PPE family protein [Mycobacteriu... 372 7e-101 gi|240172022|ref|ZP_04750681.1| PPE family protein [Mycobacteriu... 360 2e-97 gi|289574372|ref|ZP_06454599.1| PPE family protein [Mycobacteriu... 359 3e-97 gi|15841163|ref|NP_336200.1| PPE family protein [Mycobacterium t... 348 9e-94 gi|31792891|ref|NP_855384.1| PPE family protein [Mycobacterium b... 348 1e-93 gi|57116898|ref|YP_177827.1| PPE family protein [Mycobacterium t... 347 3e-93 gi|289745858|ref|ZP_06505236.1| PPE family protein [Mycobacteriu... 346 3e-93 gi|340626711|ref|YP_004745163.1| PPE family protein [Mycobacteri... 345 7e-93 gi|254550715|ref|ZP_05141162.1| PPE family protein [Mycobacteriu... 344 1e-92 gi|121637612|ref|YP_977835.1| PPE family protein [Mycobacterium ... 344 1e-92 gi|240171295|ref|ZP_04749954.1| PPE family protein [Mycobacteriu... 342 5e-92 gi|307079711|ref|ZP_07488881.1| PPE family protein [Mycobacteriu... 327 2e-87 gi|118617327|ref|YP_905659.1| PPE family protein [Mycobacterium ... 314 2e-83 gi|167969175|ref|ZP_02551452.1| PPE family protein [Mycobacteriu... 310 2e-82 gi|183982531|ref|YP_001850822.1| PPE family protein [Mycobacteri... 301 1e-79 gi|240170165|ref|ZP_04748824.1| PPE family protein [Mycobacteriu... 301 1e-79 gi|183981114|ref|YP_001849405.1| PPE family protein [Mycobacteri... 301 2e-79 gi|118616629|ref|YP_904961.1| PPE family protein [Mycobacterium ... 295 1e-77 gi|342861308|ref|ZP_08717956.1| PPE family protein [Mycobacteriu... 293 5e-77 gi|240171969|ref|ZP_04750628.1| PPE family protein [Mycobacteriu... 291 1e-76 gi|212596789|gb|ACJ35606.1| PPE45 [Mycobacterium intracellulare ... 285 1e-74 gi|183982678|ref|YP_001850969.1| PPE family protein, PPE26 [Myco... 284 1e-74 gi|158667960|gb|ABW76444.1| PPE family protein [Mycobacterium av... 278 8e-73 gi|118618470|ref|YP_906802.1| PPE family protein [Mycobacterium ... 277 3e-72 gi|240167786|ref|ZP_04746445.1| PPE family protein [Mycobacteriu... 273 3e-71 gi|342861306|ref|ZP_08717954.1| PPE family protein [Mycobacteriu... 270 3e-70 gi|254821314|ref|ZP_05226315.1| PPE family protein [Mycobacteriu... 259 5e-67 gi|118466367|ref|YP_882110.1| PPE family protein [Mycobacterium ... 252 7e-65 gi|158667958|gb|ABW76443.1| PPE family protein [Mycobacterium av... 251 1e-64 gi|118464959|ref|YP_882112.1| PPE family protein [Mycobacterium ... 251 2e-64 gi|212596061|gb|ACJ35548.1| PPE23 [Mycobacterium avium subsp. av... 251 2e-64 gi|158667962|gb|ABW76445.1| PPE family protein [Mycobacterium av... 249 7e-64 gi|342861307|ref|ZP_08717955.1| PPE family protein [Mycobacteriu... 248 2e-63 gi|41407604|ref|NP_960440.1| hypothetical protein MAP1506 [Mycob... 245 1e-62 gi|240172861|ref|ZP_04751520.1| PPE family protein, PPE31 [Mycob... 239 5e-61 gi|254821012|ref|ZP_05226013.1| PPE family protein, PPE31 [Mycob... 238 1e-60 gi|289446957|ref|ZP_06436701.1| PPE family protein [Mycobacteriu... 238 2e-60 gi|183981478|ref|YP_001849769.1| PPE family protein [Mycobacteri... 237 2e-60 gi|183982688|ref|YP_001850979.1| PPE family protein, PPE31_1 [My... 236 5e-60 gi|306784092|ref|ZP_07422414.1| PPE family protein [Mycobacteriu... 236 6e-60 gi|308231818|ref|ZP_07413879.2| PPE family protein [Mycobacteriu... 235 1e-59 gi|289554847|ref|ZP_06444057.1| PPE family protein [Mycobacteriu... 235 1e-59 >gi|57116911|ref|YP_177835.1| PPE family protein [Mycobacterium tuberculosis H37Rv] gi|121637690|ref|YP_977913.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148661596|ref|YP_001283119.1| PPE family protein [Mycobacterium tuberculosis H37Ra] 51 more sequence titles Length=393 Score = 741 bits (1914), Expect = 0.0, Method: Compositional matrix adjust. Identities = 393/393 (100%), Positives = 393/393 (100%), Gaps = 0/393 (0%) Query 1 MDFGALPPEVNSVRMYAGPGSAPMVAAASAWNGLAAELSSAATGYETVITQLSSEGWLGP 60 MDFGALPPEVNSVRMYAGPGSAPMVAAASAWNGLAAELSSAATGYETVITQLSSEGWLGP Sbjct 1 MDFGALPPEVNSVRMYAGPGSAPMVAAASAWNGLAAELSSAATGYETVITQLSSEGWLGP 60 Query 61 ASAAMAEAVAPYVAWMSAAAAQAEQAATQARAAAAAFEAAFAATVPPPLIAANRASLMQL 120 ASAAMAEAVAPYVAWMSAAAAQAEQAATQARAAAAAFEAAFAATVPPPLIAANRASLMQL Sbjct 61 ASAAMAEAVAPYVAWMSAAAAQAEQAATQARAAAAAFEAAFAATVPPPLIAANRASLMQL 120 Query 121 ISTNVFGQNTSAIAAAEAQYGEMWAQDSAAMYAYAGSSASASAVTPFSTPPQIANPTAQG 180 ISTNVFGQNTSAIAAAEAQYGEMWAQDSAAMYAYAGSSASASAVTPFSTPPQIANPTAQG Sbjct 121 ISTNVFGQNTSAIAAAEAQYGEMWAQDSAAMYAYAGSSASASAVTPFSTPPQIANPTAQG 180 Query 181 TQAAAVATAAGTAQSTLTEMITGLPNALQSLTSPLLQSSNGPLSWLWQILFGTPNFPTSI 240 TQAAAVATAAGTAQSTLTEMITGLPNALQSLTSPLLQSSNGPLSWLWQILFGTPNFPTSI Sbjct 181 TQAAAVATAAGTAQSTLTEMITGLPNALQSLTSPLLQSSNGPLSWLWQILFGTPNFPTSI 240 Query 241 SALLTDLQPYASFFYNTEGLPYFSIGMGNNFIQSAKTLGLIGSAAPAAVAAAGDAAKGLP 300 SALLTDLQPYASFFYNTEGLPYFSIGMGNNFIQSAKTLGLIGSAAPAAVAAAGDAAKGLP Sbjct 241 SALLTDLQPYASFFYNTEGLPYFSIGMGNNFIQSAKTLGLIGSAAPAAVAAAGDAAKGLP 300 Query 301 GLGGMLGGGPVAAGLGNAASVGKLSVPPVWSGPLPGSVTPGAAPLPVSTVSAAPEAAPGS 360 GLGGMLGGGPVAAGLGNAASVGKLSVPPVWSGPLPGSVTPGAAPLPVSTVSAAPEAAPGS Sbjct 301 GLGGMLGGGPVAAGLGNAASVGKLSVPPVWSGPLPGSVTPGAAPLPVSTVSAAPEAAPGS 360 Query 361 LLGGLPLAGAGGAGAGPRYGFRPTVMARPPFAG 393 LLGGLPLAGAGGAGAGPRYGFRPTVMARPPFAG Sbjct 361 LLGGLPLAGAGGAGAGPRYGFRPTVMARPPFAG 393 >gi|15841257|ref|NP_336294.1| PPE family protein [Mycobacterium tuberculosis CDC1551] gi|13881484|gb|AAK46108.1| PPE family protein [Mycobacterium tuberculosis CDC1551] Length=411 Score = 741 bits (1914), Expect = 0.0, Method: Compositional matrix adjust. Identities = 393/393 (100%), Positives = 393/393 (100%), Gaps = 0/393 (0%) Query 1 MDFGALPPEVNSVRMYAGPGSAPMVAAASAWNGLAAELSSAATGYETVITQLSSEGWLGP 60 MDFGALPPEVNSVRMYAGPGSAPMVAAASAWNGLAAELSSAATGYETVITQLSSEGWLGP Sbjct 19 MDFGALPPEVNSVRMYAGPGSAPMVAAASAWNGLAAELSSAATGYETVITQLSSEGWLGP 78 Query 61 ASAAMAEAVAPYVAWMSAAAAQAEQAATQARAAAAAFEAAFAATVPPPLIAANRASLMQL 120 ASAAMAEAVAPYVAWMSAAAAQAEQAATQARAAAAAFEAAFAATVPPPLIAANRASLMQL Sbjct 79 ASAAMAEAVAPYVAWMSAAAAQAEQAATQARAAAAAFEAAFAATVPPPLIAANRASLMQL 138 Query 121 ISTNVFGQNTSAIAAAEAQYGEMWAQDSAAMYAYAGSSASASAVTPFSTPPQIANPTAQG 180 ISTNVFGQNTSAIAAAEAQYGEMWAQDSAAMYAYAGSSASASAVTPFSTPPQIANPTAQG Sbjct 139 ISTNVFGQNTSAIAAAEAQYGEMWAQDSAAMYAYAGSSASASAVTPFSTPPQIANPTAQG 198 Query 181 TQAAAVATAAGTAQSTLTEMITGLPNALQSLTSPLLQSSNGPLSWLWQILFGTPNFPTSI 240 TQAAAVATAAGTAQSTLTEMITGLPNALQSLTSPLLQSSNGPLSWLWQILFGTPNFPTSI Sbjct 199 TQAAAVATAAGTAQSTLTEMITGLPNALQSLTSPLLQSSNGPLSWLWQILFGTPNFPTSI 258 Query 241 SALLTDLQPYASFFYNTEGLPYFSIGMGNNFIQSAKTLGLIGSAAPAAVAAAGDAAKGLP 300 SALLTDLQPYASFFYNTEGLPYFSIGMGNNFIQSAKTLGLIGSAAPAAVAAAGDAAKGLP Sbjct 259 SALLTDLQPYASFFYNTEGLPYFSIGMGNNFIQSAKTLGLIGSAAPAAVAAAGDAAKGLP 318 Query 301 GLGGMLGGGPVAAGLGNAASVGKLSVPPVWSGPLPGSVTPGAAPLPVSTVSAAPEAAPGS 360 GLGGMLGGGPVAAGLGNAASVGKLSVPPVWSGPLPGSVTPGAAPLPVSTVSAAPEAAPGS Sbjct 319 GLGGMLGGGPVAAGLGNAASVGKLSVPPVWSGPLPGSVTPGAAPLPVSTVSAAPEAAPGS 378 Query 361 LLGGLPLAGAGGAGAGPRYGFRPTVMARPPFAG 393 LLGGLPLAGAGGAGAGPRYGFRPTVMARPPFAG Sbjct 379 LLGGLPLAGAGGAGAGPRYGFRPTVMARPPFAG 411 >gi|31792977|ref|NP_855470.1| PPE family protein [Mycobacterium bovis AF2122/97] gi|31618568|emb|CAD94520.1| PPE FAMILY PROTEIN [Mycobacterium bovis AF2122/97] Length=393 Score = 740 bits (1911), Expect = 0.0, Method: Compositional matrix adjust. Identities = 392/393 (99%), Positives = 393/393 (100%), Gaps = 0/393 (0%) Query 1 MDFGALPPEVNSVRMYAGPGSAPMVAAASAWNGLAAELSSAATGYETVITQLSSEGWLGP 60 MDFGALPPEVNSVRMYAGPGSAPMVAAASAWNGLAAELSSAATGYETVITQLSSEGWLGP Sbjct 1 MDFGALPPEVNSVRMYAGPGSAPMVAAASAWNGLAAELSSAATGYETVITQLSSEGWLGP 60 Query 61 ASAAMAEAVAPYVAWMSAAAAQAEQAATQARAAAAAFEAAFAATVPPPLIAANRASLMQL 120 ASAAMAEAVAPYVAWMSAAAAQAEQAATQARAAAAAFEAAFAATVPPPLIAANRASLMQL Sbjct 61 ASAAMAEAVAPYVAWMSAAAAQAEQAATQARAAAAAFEAAFAATVPPPLIAANRASLMQL 120 Query 121 ISTNVFGQNTSAIAAAEAQYGEMWAQDSAAMYAYAGSSASASAVTPFSTPPQIANPTAQG 180 ISTNVFGQNTSAIAAAEAQYGEMWAQDSAAMYAYAGSSASASAVTPFSTPPQIANPTAQG Sbjct 121 ISTNVFGQNTSAIAAAEAQYGEMWAQDSAAMYAYAGSSASASAVTPFSTPPQIANPTAQG 180 Query 181 TQAAAVATAAGTAQSTLTEMITGLPNALQSLTSPLLQSSNGPLSWLWQILFGTPNFPTSI 240 TQAAAVATAAGTAQSTLTEMITGLPNALQSLTSPLLQSSNGPLSWLWQILFGTPNFPTSI Sbjct 181 TQAAAVATAAGTAQSTLTEMITGLPNALQSLTSPLLQSSNGPLSWLWQILFGTPNFPTSI 240 Query 241 SALLTDLQPYASFFYNTEGLPYFSIGMGNNFIQSAKTLGLIGSAAPAAVAAAGDAAKGLP 300 SALLTDLQPYASFFYNTEGLPYFSIGMGNNFIQ+AKTLGLIGSAAPAAVAAAGDAAKGLP Sbjct 241 SALLTDLQPYASFFYNTEGLPYFSIGMGNNFIQAAKTLGLIGSAAPAAVAAAGDAAKGLP 300 Query 301 GLGGMLGGGPVAAGLGNAASVGKLSVPPVWSGPLPGSVTPGAAPLPVSTVSAAPEAAPGS 360 GLGGMLGGGPVAAGLGNAASVGKLSVPPVWSGPLPGSVTPGAAPLPVSTVSAAPEAAPGS Sbjct 301 GLGGMLGGGPVAAGLGNAASVGKLSVPPVWSGPLPGSVTPGAAPLPVSTVSAAPEAAPGS 360 Query 361 LLGGLPLAGAGGAGAGPRYGFRPTVMARPPFAG 393 LLGGLPLAGAGGAGAGPRYGFRPTVMARPPFAG Sbjct 361 LLGGLPLAGAGGAGAGPRYGFRPTVMARPPFAG 393 >gi|289569854|ref|ZP_06450081.1| PPE family protein [Mycobacterium tuberculosis T17] gi|289543608|gb|EFD47256.1| PPE family protein [Mycobacterium tuberculosis T17] Length=393 Score = 740 bits (1911), Expect = 0.0, Method: Compositional matrix adjust. Identities = 392/393 (99%), Positives = 392/393 (99%), Gaps = 0/393 (0%) Query 1 MDFGALPPEVNSVRMYAGPGSAPMVAAASAWNGLAAELSSAATGYETVITQLSSEGWLGP 60 MDFGALPPEVNSVRMYAGPGSAPMVAAASAWNGLAAELSSAATGYETVITQLSSEGWLGP Sbjct 1 MDFGALPPEVNSVRMYAGPGSAPMVAAASAWNGLAAELSSAATGYETVITQLSSEGWLGP 60 Query 61 ASAAMAEAVAPYVAWMSAAAAQAEQAATQARAAAAAFEAAFAATVPPPLIAANRASLMQL 120 ASAAMAEAVAPYVAWMSAAAAQAEQAATQARAAAAAFEAAFAATVPPPLIAANRASLMQL Sbjct 61 ASAAMAEAVAPYVAWMSAAAAQAEQAATQARAAAAAFEAAFAATVPPPLIAANRASLMQL 120 Query 121 ISTNVFGQNTSAIAAAEAQYGEMWAQDSAAMYAYAGSSASASAVTPFSTPPQIANPTAQG 180 ISTNVFGQNTSAIAAAEAQYGEMWAQDSAAMYAYAGSSASASAVTPFSTPPQIANPTAQG Sbjct 121 ISTNVFGQNTSAIAAAEAQYGEMWAQDSAAMYAYAGSSASASAVTPFSTPPQIANPTAQG 180 Query 181 TQAAAVATAAGTAQSTLTEMITGLPNALQSLTSPLLQSSNGPLSWLWQILFGTPNFPTSI 240 TQAAAVATAAGTAQSTLTEMITGLPNALQSLTSPLLQSSNGPLSWLWQILFGTPNFPTSI Sbjct 181 TQAAAVATAAGTAQSTLTEMITGLPNALQSLTSPLLQSSNGPLSWLWQILFGTPNFPTSI 240 Query 241 SALLTDLQPYASFFYNTEGLPYFSIGMGNNFIQSAKTLGLIGSAAPAAVAAAGDAAKGLP 300 SALLTDLQPYASFFYNTEGLPYFSIGMGNNFIQS KTLGLIGSAAPAAVAAAGDAAKGLP Sbjct 241 SALLTDLQPYASFFYNTEGLPYFSIGMGNNFIQSTKTLGLIGSAAPAAVAAAGDAAKGLP 300 Query 301 GLGGMLGGGPVAAGLGNAASVGKLSVPPVWSGPLPGSVTPGAAPLPVSTVSAAPEAAPGS 360 GLGGMLGGGPVAAGLGNAASVGKLSVPPVWSGPLPGSVTPGAAPLPVSTVSAAPEAAPGS Sbjct 301 GLGGMLGGGPVAAGLGNAASVGKLSVPPVWSGPLPGSVTPGAAPLPVSTVSAAPEAAPGS 360 Query 361 LLGGLPLAGAGGAGAGPRYGFRPTVMARPPFAG 393 LLGGLPLAGAGGAGAGPRYGFRPTVMARPPFAG Sbjct 361 LLGGLPLAGAGGAGAGPRYGFRPTVMARPPFAG 393 >gi|289745779|ref|ZP_06505157.1| PPE family protein [Mycobacterium tuberculosis 02_1987] gi|339631843|ref|YP_004723485.1| PPE family protein [Mycobacterium africanum GM041182] gi|289686307|gb|EFD53795.1| PPE family protein [Mycobacterium tuberculosis 02_1987] gi|339331199|emb|CCC26881.1| PPE family protein [Mycobacterium africanum GM041182] Length=393 Score = 740 bits (1911), Expect = 0.0, Method: Compositional matrix adjust. Identities = 392/393 (99%), Positives = 392/393 (99%), Gaps = 0/393 (0%) Query 1 MDFGALPPEVNSVRMYAGPGSAPMVAAASAWNGLAAELSSAATGYETVITQLSSEGWLGP 60 MDFGALPPEVNSVRMYAGPGSAPMVAAASAWNGLAAELSSAATGYETVITQLSSEGWLGP Sbjct 1 MDFGALPPEVNSVRMYAGPGSAPMVAAASAWNGLAAELSSAATGYETVITQLSSEGWLGP 60 Query 61 ASAAMAEAVAPYVAWMSAAAAQAEQAATQARAAAAAFEAAFAATVPPPLIAANRASLMQL 120 ASAAMAEAVAPYVAWMSAAA QAEQAATQARAAAAAFEAAFAATVPPPLIAANRASLMQL Sbjct 61 ASAAMAEAVAPYVAWMSAAATQAEQAATQARAAAAAFEAAFAATVPPPLIAANRASLMQL 120 Query 121 ISTNVFGQNTSAIAAAEAQYGEMWAQDSAAMYAYAGSSASASAVTPFSTPPQIANPTAQG 180 ISTNVFGQNTSAIAAAEAQYGEMWAQDSAAMYAYAGSSASASAVTPFSTPPQIANPTAQG Sbjct 121 ISTNVFGQNTSAIAAAEAQYGEMWAQDSAAMYAYAGSSASASAVTPFSTPPQIANPTAQG 180 Query 181 TQAAAVATAAGTAQSTLTEMITGLPNALQSLTSPLLQSSNGPLSWLWQILFGTPNFPTSI 240 TQAAAVATAAGTAQSTLTEMITGLPNALQSLTSPLLQSSNGPLSWLWQILFGTPNFPTSI Sbjct 181 TQAAAVATAAGTAQSTLTEMITGLPNALQSLTSPLLQSSNGPLSWLWQILFGTPNFPTSI 240 Query 241 SALLTDLQPYASFFYNTEGLPYFSIGMGNNFIQSAKTLGLIGSAAPAAVAAAGDAAKGLP 300 SALLTDLQPYASFFYNTEGLPYFSIGMGNNFIQSAKTLGLIGSAAPAAVAAAGDAAKGLP Sbjct 241 SALLTDLQPYASFFYNTEGLPYFSIGMGNNFIQSAKTLGLIGSAAPAAVAAAGDAAKGLP 300 Query 301 GLGGMLGGGPVAAGLGNAASVGKLSVPPVWSGPLPGSVTPGAAPLPVSTVSAAPEAAPGS 360 GLGGMLGGGPVAAGLGNAASVGKLSVPPVWSGPLPGSVTPGAAPLPVSTVSAAPEAAPGS Sbjct 301 GLGGMLGGGPVAAGLGNAASVGKLSVPPVWSGPLPGSVTPGAAPLPVSTVSAAPEAAPGS 360 Query 361 LLGGLPLAGAGGAGAGPRYGFRPTVMARPPFAG 393 LLGGLPLAGAGGAGAGPRYGFRPTVMARPPFAG Sbjct 361 LLGGLPLAGAGGAGAGPRYGFRPTVMARPPFAG 393 >gi|254364621|ref|ZP_04980667.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem] gi|134150135|gb|EBA42180.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem] Length=391 Score = 543 bits (1398), Expect = 2e-152, Method: Compositional matrix adjust. Identities = 391/393 (99%), Positives = 391/393 (99%), Gaps = 2/393 (0%) Query 1 MDFGALPPEVNSVRMYAGPGSAPMVAAASAWNGLAAELSSAATGYETVITQLSSEGWLGP 60 MDFGALPPEVNSVRMYAGPGSAPMVAAASAWNGLAAELSSAATGYETVITQLSSEGWLGP Sbjct 1 MDFGALPPEVNSVRMYAGPGSAPMVAAASAWNGLAAELSSAATGYETVITQLSSEGWLGP 60 Query 61 ASAAMAEAVAPYVAWMSAAAAQAEQAATQARAAAAAFEAAFAATVPPPLIAANRASLMQL 120 ASAAMAEAVAPYVAWMSAAAAQAEQAATQARAAAAAFEAAFAATVPPPLIAANRASLMQL Sbjct 61 ASAAMAEAVAPYVAWMSAAAAQAEQAATQARAAAAAFEAAFAATVPPPLIAANRASLMQL 120 Query 121 ISTNVFGQNTSAIAAAEAQYGEMWAQDSAAMYAYAGSSASASAVTPFSTPPQIANPTAQG 180 ISTNVFGQNTSAIAAAEAQYGEMWAQDSAAMYAYAGSSASASAVTPFSTPPQIANPTAQG Sbjct 121 ISTNVFGQNTSAIAAAEAQYGEMWAQDSAAMYAYAGSSASASAVTPFSTPPQIANPTAQG 180 Query 181 TQAAAVATAAGTAQSTLTEMITGLPNALQSLTSPLLQSSNGPLSWLWQILFGTPNFPTSI 240 TQA VATAAGTAQSTLTEMITGLPNALQSLTSPLLQSSNGPLSWLWQILFGTPNFPTSI Sbjct 181 TQA--VATAAGTAQSTLTEMITGLPNALQSLTSPLLQSSNGPLSWLWQILFGTPNFPTSI 238 Query 241 SALLTDLQPYASFFYNTEGLPYFSIGMGNNFIQSAKTLGLIGSAAPAAVAAAGDAAKGLP 300 SALLTDLQPYASFFYNTEGLPYFSIGMGNNFIQSAKTLGLIGSAAPAAVAAAGDAAKGLP Sbjct 239 SALLTDLQPYASFFYNTEGLPYFSIGMGNNFIQSAKTLGLIGSAAPAAVAAAGDAAKGLP 298 Query 301 GLGGMLGGGPVAAGLGNAASVGKLSVPPVWSGPLPGSVTPGAAPLPVSTVSAAPEAAPGS 360 GLGGMLGGGPVAAGLGNAASVGKLSVPPVWSGPLPGSVTPGAAPLPVSTVSAAPEAAPGS Sbjct 299 GLGGMLGGGPVAAGLGNAASVGKLSVPPVWSGPLPGSVTPGAAPLPVSTVSAAPEAAPGS 358 Query 361 LLGGLPLAGAGGAGAGPRYGFRPTVMARPPFAG 393 LLGGLPLAGAGGAGAGPRYGFRPTVMARPPFAG Sbjct 359 LLGGLPLAGAGGAGAGPRYGFRPTVMARPPFAG 391 >gi|340626801|ref|YP_004745253.1| PPE family protein [Mycobacterium canettii CIPT 140010059] gi|340004991|emb|CCC44139.1| PPE family protein [Mycobacterium canettii CIPT 140010059] Length=397 Score = 516 bits (1328), Expect = 3e-144, Method: Compositional matrix adjust. Identities = 392/397 (99%), Positives = 392/397 (99%), Gaps = 4/397 (1%) Query 1 MDFGALPPEVNSVRMYAGPGSAPMVAAASAWNGLAAELSSAATGYETVITQLSSEGWLGP 60 MDFGALPPEVNSVRMYAGPGSAPMVAAASAWNGLAAELSSAATGYETVITQLSSEGWLGP Sbjct 1 MDFGALPPEVNSVRMYAGPGSAPMVAAASAWNGLAAELSSAATGYETVITQLSSEGWLGP 60 Query 61 ASAAMAEAVAPYVAWMSAAAAQAEQAATQARAAAAAFEAAFAATVPPPLIAANRASLMQL 120 ASAAMAEAVAPYVAWMSAAAAQAEQAATQARAAAAAFEAAFAATVPPPLIAANRASLMQL Sbjct 61 ASAAMAEAVAPYVAWMSAAAAQAEQAATQARAAAAAFEAAFAATVPPPLIAANRASLMQL 120 Query 121 ISTNVFGQNTSAIAAAEAQYGEMWAQDSAAMYAYAGSSASASAVTPFSTPPQIANPTAQG 180 ISTNVFGQNTSAIAAAEAQYGEMWAQDSAAMYAYAGSSASASAVTPFSTPPQIANPTAQG Sbjct 121 ISTNVFGQNTSAIAAAEAQYGEMWAQDSAAMYAYAGSSASASAVTPFSTPPQIANPTAQG 180 Query 181 TQAAAVATAAGTAQ----STLTEMITGLPNALQSLTSPLLQSSNGPLSWLWQILFGTPNF 236 TQAAAVATAAGTA STLTEMITGLPNALQSLTSPLLQSSNGPLSWLWQILFGTPNF Sbjct 181 TQAAAVATAAGTAAGTAQSTLTEMITGLPNALQSLTSPLLQSSNGPLSWLWQILFGTPNF 240 Query 237 PTSISALLTDLQPYASFFYNTEGLPYFSIGMGNNFIQSAKTLGLIGSAAPAAVAAAGDAA 296 PTSISALLTDLQPYASFFYNTEGLPYFSIGMGNNFIQSAKTLGLIGSAAPAAVAAAGDAA Sbjct 241 PTSISALLTDLQPYASFFYNTEGLPYFSIGMGNNFIQSAKTLGLIGSAAPAAVAAAGDAA 300 Query 297 KGLPGLGGMLGGGPVAAGLGNAASVGKLSVPPVWSGPLPGSVTPGAAPLPVSTVSAAPEA 356 KGLPGLGGMLGGGPVAAGLGNAASVGKLSVPPVWSGPLPGSVTPGAAPLPVSTVSAAPEA Sbjct 301 KGLPGLGGMLGGGPVAAGLGNAASVGKLSVPPVWSGPLPGSVTPGAAPLPVSTVSAAPEA 360 Query 357 APGSLLGGLPLAGAGGAGAGPRYGFRPTVMARPPFAG 393 APGSLLGGLPLAGAGGAGAGPRYGFRPTVMARPPFAG Sbjct 361 APGSLLGGLPLAGAGGAGAGPRYGFRPTVMARPPFAG 397 >gi|183981917|ref|YP_001850208.1| PPE family protein [Mycobacterium marinum M] gi|183175243|gb|ACC40353.1| PPE family protein [Mycobacterium marinum M] Length=398 Score = 382 bits (982), Expect = 4e-104, Method: Compositional matrix adjust. Identities = 237/402 (59%), Positives = 285/402 (71%), Gaps = 13/402 (3%) Query 1 MDFGALPPEVNSVRMYAGPGSAPMVAAASAWNGLAAELSSAATGYETVITQLSSEGWLGP 60 MDFG PPEV S MY GPGS M AAAS WN +AAEL SAAT YE+++ L EGWLGP Sbjct 1 MDFGRRPPEVTSALMYMGPGSTSMTAAASVWNRVAAELDSAATSYESLVIGLVEEGWLGP 60 Query 61 ASAAMAEAVAPYVAWMSAAAAQAEQAATQARAAAAAFEAAFAATVPPPLIAANRASLMQL 120 AS AMA+AVAPYV WM A AAQAE A QARA+AAA+E AF A VPPPLI+ANR L +L Sbjct 61 ASVAMADAVAPYVVWMRATAAQAEHTAMQARASAAAYETAFGAVVPPPLISANRVRLAEL 120 Query 121 ISTNVFGQNTSAIAAAEAQYGEMWAQDSAAMYAYAGSSASASAVTPFSTPPQIANPTAQG 180 I++NVFGQNT+ I A E +YG+MWAQD+AAMY YA +++SA+ +TPF+ P QI +P A Sbjct 121 IASNVFGQNTAVITALETEYGQMWAQDAAAMYEYAAATSSATELTPFTQPQQIVSPGAGS 180 Query 181 TQAAAV----ATAAGTAQSTLTEMITGLPNALQSLTSPLLQSS--NGPLSWLWQILFGTP 234 Q AAV AT AGT+Q+TL+ +I+ +P AL + +PL S+ + PL WLWQILFGT Sbjct 181 GQIAAVAHSAATLAGTSQTTLSRLISEIPKALHGIVAPLAASTTPDSPLGWLWQILFGT- 239 Query 235 NFPTSISALLTDLQPYASFFYNTEGLPYFSIGMGNNFIQSAKTLGLIGSAAPAAVAAAGD 294 FPTSISALLTDLQPYASFFYNTEGLPYFSIGM NNFIQ +KTLGL+ AA A Sbjct 240 TFPTSISALLTDLQPYASFFYNTEGLPYFSIGMANNFIQMSKTLGLLSGTTAAATGGAAS 299 Query 295 AAKGLPGLGGMLGGGPVAAGLGNAASVGKLSVPPVWSGPLPGSVTPGAAPLPVSTVSAAP 354 G G + GGG V+A LG+AAS+G+LSVPP W+ +P + A +P+ T+ AP Sbjct 300 GLAG--LGGLIDGGGQVSAHLGHAASLGRLSVPPSWAQSVP-DLESMPARMPIETLKFAP 356 Query 355 E---AAPGSLLGGLPLAGAGGAGAGPRYGFRPTVMARPPFAG 393 + A L G G +G+GPRYG RPTVMARPPFAG Sbjct 357 DGGGAGNLLGGMPLGGPGLGASGSGPRYGVRPTVMARPPFAG 398 >gi|296167733|ref|ZP_06849950.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897076|gb|EFG76691.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=406 Score = 372 bits (955), Expect = 7e-101, Method: Compositional matrix adjust. Identities = 233/407 (58%), Positives = 275/407 (68%), Gaps = 16/407 (3%) Query 1 MDFGALPPEVNSVRMYAGPGSAPMVAAASAWNGLAAELSSAATGYETVITQLSSEGWLGP 60 +DFGA PPE NS RMY GPG + AAASAWNGLAAEL+S A GY+ VIT LS E WLGP Sbjct 2 IDFGAAPPEYNSARMYTGPGPEALTAAASAWNGLAAELNSTALGYDKVITALSGEEWLGP 61 Query 61 ASAAMAEAVAPYVAWMSAAAAQAEQAATQARAAAAAFEAAFAATVPPPLIAANRASLMQL 120 ASA+MA+AVAPYVAWM AAQAEQ A Q AAA A+E A AATVPPPL+AANRA QL Sbjct 62 ASASMAQAVAPYVAWMRTTAAQAEQTANQMHAAATAYETALAATVPPPLVAANRAQTAQL 121 Query 121 ISTNVFGQNTSAIAAAEAQYGEMWAQDSAAMYAYAGSSASASAVTPFSTPPQIANPTAQG 180 ++TNV G NT AIA EAQYGEMWAQD++ MY+YAG SA+A+ V PF+ PQIANP+AQ Sbjct 122 LATNVLGLNTPAIAQLEAQYGEMWAQDASTMYSYAGQSAAATKVAPFTAAPQIANPSAQA 181 Query 181 TQAAAVATAAGTA-----QSTLTEMITGLPNALQSLTSP-LLQSS--NGPLSWLWQILFG 232 TQ AVA A G + QS L+ ++ PN LQ+L +P QSS + P S +W +L G Sbjct 182 TQGTAVANATGNSAASSTQSVLSHAVSSTPNTLQALAAPAATQSSTTSAPFSEIWYLLTG 241 Query 233 TPNFPTSISALLTDLQPYASFFYNTEGLPYFSIGMGNNFIQSAKTLGLIGSAAPAAVAAA 292 PTS+ + + P+++ +YNTEGLPYFS+GMGN +Q AKT GL+ AAP AV A Sbjct 242 QTTLPTSLGSFVNGYNPFSALWYNTEGLPYFSVGMGNFGVQIAKTTGLLNGAAP-AVKAL 300 Query 293 GDAAKGLPGLGGMLGGGPVAAGLGNAASV-GKLSVPPVWSGPLPGSVTPGAAPLPVSTVS 351 LGG AA LGNAASV G+LSVP WS + G A +PVSTVS Sbjct 301 PGLGGLGGLLGGGATAAHPAAALGNAASVGGRLSVPVSWSAASTPAPVLGQA-IPVSTVS 359 Query 352 AAPE--AAPGSLL---GGLPLAGAGGAGAGPRYGFRPTVMARPPFAG 393 AAP+ AAPG+LL G AG GP+YGFRPTVMARPPF G Sbjct 360 AAPDATAAPGNLLGGMPLAGAGAGGHAGVGPKYGFRPTVMARPPFGG 406 >gi|240172022|ref|ZP_04750681.1| PPE family protein [Mycobacterium kansasii ATCC 12478] Length=365 Score = 360 bits (924), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 249/366 (69%), Positives = 280/366 (77%), Gaps = 15/366 (4%) Query 1 MDFGALPPEVNSVRMYAGPGSAPMVAAASAWNGLAAELSSAATGYETVITQLSSEGWLGP 60 MDFGALPPEVNS RMY+GPGSAPM AAA+AWN LA ELSSAA GYE V+TQLSSE W+GP Sbjct 1 MDFGALPPEVNSGRMYSGPGSAPMAAAATAWNSLAVELSSAARGYEAVVTQLSSEEWMGP 60 Query 61 ASAAMAEAVAPYVAWMSAAAAQAEQAATQARAAAAAFEAAFAATVPPPLIAANRASLMQL 120 ASA MAEAVAPYVAW AAA AEQAA QARAAAAAFE AFAA VPPPLIAANRA L Q Sbjct 61 ASATMAEAVAPYVAWTGAAATHAEQAAAQARAAAAAFETAFAAVVPPPLIAANRAQLAQA 120 Query 121 ISTNVFGQNTSAIAAAEAQYGEMWAQDSAAMYAYAGSSASASAVTPFSTPPQIANPT--- 177 I+TNVFGQNTS IAA EAQYGEMWAQD+AAMY+YAG+SA A+AVTPF++PPQI +PT Sbjct 121 IATNVFGQNTSVIAALEAQYGEMWAQDAAAMYSYAGNSAHAAAVTPFTSPPQITSPTAQA 180 Query 178 -AQGTQAAAVATAAGTAQSTLTEMITGLPNALQSLTSPL----------LQSSNGPLSWL 226 AAA T+AG+AQ TL + ++ +P L L +P+ LQS+ GPL+ L Sbjct 181 GQTAAVAAATGTSAGSAQQTLNQFLSAIPTTLGGLAAPVTGPIGTEVGFLQSAQGPLTGL 240 Query 227 WQILFGTPNFPTSISALLTDLQPYASFFYNTEGLPYFSIGMGNNFIQSAKTLGLIGSAAP 286 WQ+LFGT FP SIS LT PYA FFYNTEGLPYFSIGM NNF+QSAKTLGLIG +A Sbjct 241 WQVLFGTSTFPNSISGFLTAYTPYAGFFYNTEGLPYFSIGMANNFVQSAKTLGLIGGSA- 299 Query 287 AAVAAAGDAAKGLPGLGGMLGGGPVAAGLGNAASVGKLSVPPVWSGPLPGSVTPGAAPLP 346 A AA A G + GGG V+ GLGNAASVGKLSVPPVWSG LPG++ PG APLP Sbjct 300 PAAAAGAAAKGLPGLGGLLGGGGSVSGGLGNAASVGKLSVPPVWSGQLPGAMHPGGAPLP 359 Query 347 VSTVSA 352 VS ++A Sbjct 360 VSAITA 365 >gi|289574372|ref|ZP_06454599.1| PPE family protein [Mycobacterium tuberculosis K85] gi|289538803|gb|EFD43381.1| PPE family protein [Mycobacterium tuberculosis K85] Length=384 Score = 359 bits (922), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 242/403 (61%), Positives = 281/403 (70%), Gaps = 29/403 (7%) Query 1 MDFGALPPEVNSVRMYAGPGSAPMVAAASAWNGLAAELSSAATGYETVITQLSSEGWLGP 60 MDFGALPPEVNS RMY GPGSAPMVAAASAWNGLAAELS AA GYE VIT L +E WLGP Sbjct 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60 Query 61 ASAAMAEAVAPYVAWMSAAAAQAEQAATQARAAAAAFEAAFAATVPPPLIAANRASLMQL 120 AS M EAVAPYVAWM A A QAEQAA+QARAAAAA+E AFAA VPPPLIAANRA L L Sbjct 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120 Query 121 ISTNVFGQNTSAIAAAEAQYGEMWAQDSAAMYAYAGSSASASAVTPFSTPPQIANPTAQG 180 ++ NVFGQNT++IAA EAQY EMWAQD+ AMY YAGSSA+A+ VTPF+ PP +P+A Sbjct 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180 Query 181 TQAAAVATAAGT----AQSTLTEMITGLPNALQSLTSPLLQSSNGPLSWLWQILFGTPNF 236 TQ +AVA AAGT AQS + E+I LPN L LTSPL + TP + Sbjct 181 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLTSPLSSALTAA---------ATPGW 231 Query 237 PTSISALLTDLQPYASFFYNTEGLPYFSIGMGNNFIQSAKTLGLIGSAAPAAVAAAGDAA 296 + + P + FYNT GLPYF+IG+GN+ I S + LG IGS + AA + Sbjct 232 ---LEWFINWYLPISQLFYNTVGLPYFAIGIGNSLITSWRALGWIGSRGRRSCRAARRPS 288 Query 297 KGLPGLGGMLGGGPVAAGLGNAASVGKLSVPPVWSGPLPG---SVTPGAAPLPVSTVSAA 353 + G GPV+AGLGNAA++GKLSVPP W+G P +V +APL VS + Sbjct 289 ------ARVCGTGPVSAGLGNAATIGKLSVPPNWAGASPSLAPTVGSASAPL-VSDIVEQ 341 Query 354 PEA-APGSLLGGLPL--AGAGGAGAGPRYGFRPTVMARPPFAG 393 PEA A G+LLGG+PL +G G GAGPRYGFR TVM+RPPFAG Sbjct 342 PEAGAAGNLLGGMPLAGSGTGTGGAGPRYGFRVTVMSRPPFAG 384 >gi|15841163|ref|NP_336200.1| PPE family protein [Mycobacterium tuberculosis CDC1551] gi|13881383|gb|AAK46014.1| PPE family protein [Mycobacterium tuberculosis CDC1551] gi|323719795|gb|EGB28909.1| PPE family protein [Mycobacterium tuberculosis CDC1551A] Length=385 Score = 348 bits (893), Expect = 9e-94, Method: Compositional matrix adjust. Identities = 245/403 (61%), Positives = 282/403 (70%), Gaps = 28/403 (6%) Query 1 MDFGALPPEVNSVRMYAGPGSAPMVAAASAWNGLAAELSSAATGYETVITQLSSEGWLGP 60 MDFGALPPEVNS RMY GPGSAPMVAAASAWNGLAAELS AA GYE VIT L +E WLGP Sbjct 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60 Query 61 ASAAMAEAVAPYVAWMSAAAAQAEQAATQARAAAAAFEAAFAATVPPPLIAANRASLMQL 120 AS M EAVAPYVAWM A A QAEQAA+QARAAAAA+E AFAA VPPPLIAANRA L L Sbjct 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120 Query 121 ISTNVFGQNTSAIAAAEAQYGEMWAQDSAAMYAYAGSSASASAVTPFSTPPQIANPTAQG 180 ++ NVFGQNT++IAA EAQY EMWAQD+ AMY YAGSSA+A+ VTPF+ PP +P+A Sbjct 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180 Query 181 TQAAAVATAAGT----AQSTLTEMITGLPNALQSLTSPLLQSSNGPLSWLWQILFGTPNF 236 TQ +AVA AAGT AQS + E+I LPN L LTSPL + TP + Sbjct 181 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLTSPLSSALTAA---------ATPGW 231 Query 237 PTSISALLTDLQPYASFFYNTEGLPYFSIGMGNNFIQSAKTLGLIGSAAPAAVAAAGDAA 296 + + P + FYNT GLPYF+IG+GN+ I S + LG IG A A AAA A Sbjct 232 ---LEWFINWYLPISQLFYNTVGLPYFAIGIGNSLITSWRALGWIGPEAAEAAAAAPAAV 288 Query 297 KGLPGLGGMLGGGPVAAGLGNAASVGKLSVPPVWSGPLPG---SVTPGAAPLPVSTVSAA 353 + G GPV+AGLGNAA++GKLS+PP W+G P +V +APL VS + Sbjct 289 G-----AAVGGTGPVSAGLGNAATIGKLSLPPNWAGASPSLAPTVGSASAPL-VSDIVEQ 342 Query 354 PEA-APGSLLGGLPLA--GAGGAGAGPRYGFRPTVMARPPFAG 393 PEA A G+LLGG+PLA G G GAGPRYGFR TVM+RPPFAG Sbjct 343 PEAGAAGNLLGGMPLAGSGTGMGGAGPRYGFRVTVMSRPPFAG 385 >gi|31792891|ref|NP_855384.1| PPE family protein [Mycobacterium bovis AF2122/97] gi|224990087|ref|YP_002644774.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|289443162|ref|ZP_06432906.1| PPE family protein [Mycobacterium tuberculosis T46] 18 more sequence titles Length=385 Score = 348 bits (893), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 245/403 (61%), Positives = 282/403 (70%), Gaps = 28/403 (6%) Query 1 MDFGALPPEVNSVRMYAGPGSAPMVAAASAWNGLAAELSSAATGYETVITQLSSEGWLGP 60 MDFGALPPEVNS RMY GPGSAPMVAAASAWNGLAAELS AA GYE VIT L +E WLGP Sbjct 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60 Query 61 ASAAMAEAVAPYVAWMSAAAAQAEQAATQARAAAAAFEAAFAATVPPPLIAANRASLMQL 120 AS M EAVAPYVAWM A A QAEQAA+QARAAAAA+E AFAA VPPPLIAANRA L L Sbjct 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120 Query 121 ISTNVFGQNTSAIAAAEAQYGEMWAQDSAAMYAYAGSSASASAVTPFSTPPQIANPTAQG 180 ++ NVFGQNT++IAA EAQY EMWAQD+ AMY YAGSSA+A+ VTPF+ PP +P+A Sbjct 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180 Query 181 TQAAAVATAAGT----AQSTLTEMITGLPNALQSLTSPLLQSSNGPLSWLWQILFGTPNF 236 TQ +AVA AAGT AQS + E+I LPN L LTSPL + TP + Sbjct 181 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLTSPLSSALTAA---------ATPGW 231 Query 237 PTSISALLTDLQPYASFFYNTEGLPYFSIGMGNNFIQSAKTLGLIGSAAPAAVAAAGDAA 296 + + P + FYNT GLPYF+IG+GN+ I S + LG IG A A AAA A Sbjct 232 ---LEWFINWYLPISQLFYNTVGLPYFAIGIGNSLITSWRALGWIGPEAAEAAAAAPAAV 288 Query 297 KGLPGLGGMLGGGPVAAGLGNAASVGKLSVPPVWSGPLPG---SVTPGAAPLPVSTVSAA 353 + G GPV+AGLGNAA++GKLSVPP W+G P +V +APL VS + Sbjct 289 G-----AAVGGTGPVSAGLGNAATIGKLSVPPNWAGASPSLAPTVGSASAPL-VSDIVEQ 342 Query 354 PEA-APGSLLGGLPL--AGAGGAGAGPRYGFRPTVMARPPFAG 393 PEA A G+LLGG+PL +G G GAGPRYGFR TVM+RPPFAG Sbjct 343 PEAGAAGNLLGGMPLAGSGTGTGGAGPRYGFRVTVMSRPPFAG 385 >gi|57116898|ref|YP_177827.1| PPE family protein [Mycobacterium tuberculosis H37Rv] gi|148661502|ref|YP_001283025.1| PPE family protein [Mycobacterium tuberculosis H37Ra] gi|148822911|ref|YP_001287665.1| PPE family protein [Mycobacterium tuberculosis F11] 39 more sequence titles Length=385 Score = 347 bits (889), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 244/403 (61%), Positives = 282/403 (70%), Gaps = 28/403 (6%) Query 1 MDFGALPPEVNSVRMYAGPGSAPMVAAASAWNGLAAELSSAATGYETVITQLSSEGWLGP 60 MDFGALPPEVNS RMY GPGSAPMVAAASAWNGLAAELS AA GYE VIT L +E WLGP Sbjct 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60 Query 61 ASAAMAEAVAPYVAWMSAAAAQAEQAATQARAAAAAFEAAFAATVPPPLIAANRASLMQL 120 AS M EAVAPYVAWM A A QAEQAA+QARAAAAA+E AFAA VPPPLIAANRA L L Sbjct 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120 Query 121 ISTNVFGQNTSAIAAAEAQYGEMWAQDSAAMYAYAGSSASASAVTPFSTPPQIANPTAQG 180 ++ NVFGQNT++IAA EAQY EMWAQD+ AMY YAGSSA+A+ VTPF+ PP +P+A Sbjct 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180 Query 181 TQAAAVATAAGT----AQSTLTEMITGLPNALQSLTSPLLQSSNGPLSWLWQILFGTPNF 236 TQ +AVA AAGT AQS + E+I LPN L LTSPL + TP + Sbjct 181 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLTSPLSSALTAA---------ATPGW 231 Query 237 PTSISALLTDLQPYASFFYNTEGLPYFSIGMGNNFIQSAKTLGLIGSAAPAAVAAAGDAA 296 + + P + FYNT GLPYF+IG+GN+ I S + LG IG A A AAA A Sbjct 232 ---LEWFINWYLPISQLFYNTVGLPYFAIGIGNSLITSWRALGWIGPEAAEAAAAAPAAV 288 Query 297 KGLPGLGGMLGGGPVAAGLGNAASVGKLSVPPVWSGPLPG---SVTPGAAPLPVSTVSAA 353 + G GPV+AGLGNAA++GKLS+PP W+G P +V +APL VS + Sbjct 289 G-----AAVGGTGPVSAGLGNAATIGKLSLPPNWAGASPSLAPTVGSASAPL-VSDIVEQ 342 Query 354 PEA-APGSLLGGLPL--AGAGGAGAGPRYGFRPTVMARPPFAG 393 PEA A G+LLGG+PL +G G GAGPRYGFR TVM+RPPFAG Sbjct 343 PEAGAAGNLLGGMPLAGSGTGTGGAGPRYGFRVTVMSRPPFAG 385 >gi|289745858|ref|ZP_06505236.1| PPE family protein [Mycobacterium tuberculosis 02_1987] gi|289686386|gb|EFD53874.1| PPE family protein [Mycobacterium tuberculosis 02_1987] Length=385 Score = 346 bits (888), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 244/403 (61%), Positives = 282/403 (70%), Gaps = 28/403 (6%) Query 1 MDFGALPPEVNSVRMYAGPGSAPMVAAASAWNGLAAELSSAATGYETVITQLSSEGWLGP 60 MDFGALPPEVNS RMY GPGSAPMVAAASAWNGLAAELS AA GYE VIT L +E WLGP Sbjct 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60 Query 61 ASAAMAEAVAPYVAWMSAAAAQAEQAATQARAAAAAFEAAFAATVPPPLIAANRASLMQL 120 AS M EAVAPYVAWM A A QAEQAA+QARAAAAA+E AFAA VPPPLIAANRA L L Sbjct 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120 Query 121 ISTNVFGQNTSAIAAAEAQYGEMWAQDSAAMYAYAGSSASASAVTPFSTPPQIANPTAQG 180 ++ NVFGQNT++IAA EAQY EMWAQD+ AM+ YAGSSA+A+ VTPF+ PP +P+A Sbjct 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMHGYAGSSATATKVTPFAPPPNTTSPSAAA 180 Query 181 TQAAAVATAAGT----AQSTLTEMITGLPNALQSLTSPLLQSSNGPLSWLWQILFGTPNF 236 TQ +AVA AAGT AQS + E+I LPN L LTSPL + TP + Sbjct 181 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLTSPLSSALTAA---------ATPGW 231 Query 237 PTSISALLTDLQPYASFFYNTEGLPYFSIGMGNNFIQSAKTLGLIGSAAPAAVAAAGDAA 296 + + P + FYNT GLPYF+IG+GN+ I S + LG IG A A AAA A Sbjct 232 ---LEWFINWYLPISQLFYNTVGLPYFAIGIGNSLITSWRALGWIGPEAAEAAAAAPAAV 288 Query 297 KGLPGLGGMLGGGPVAAGLGNAASVGKLSVPPVWSGPLPG---SVTPGAAPLPVSTVSAA 353 + G GPV+AGLGNAA++GKLSVPP W+G P +V +APL VS + Sbjct 289 G-----AAVGGTGPVSAGLGNAATIGKLSVPPNWAGASPSLAPTVGSASAPL-VSDIVEQ 342 Query 354 PEA-APGSLLGGLPL--AGAGGAGAGPRYGFRPTVMARPPFAG 393 PEA A G+LLGG+PL +G G GAGPRYGFR TVM+RPPFAG Sbjct 343 PEAGAAGNLLGGMPLAGSGTGTGGAGPRYGFRVTVMSRPPFAG 385 >gi|340626711|ref|YP_004745163.1| PPE family protein [Mycobacterium canettii CIPT 140010059] gi|340004901|emb|CCC44047.1| PPE family protein [Mycobacterium canettii CIPT 140010059] Length=385 Score = 345 bits (885), Expect = 7e-93, Method: Compositional matrix adjust. Identities = 245/403 (61%), Positives = 281/403 (70%), Gaps = 28/403 (6%) Query 1 MDFGALPPEVNSVRMYAGPGSAPMVAAASAWNGLAAELSSAATGYETVITQLSSEGWLGP 60 MDFGALPPEVNS RMY GPGSAPMVAAASAWNGLAAELS AA GYE VIT L +E WLGP Sbjct 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60 Query 61 ASAAMAEAVAPYVAWMSAAAAQAEQAATQARAAAAAFEAAFAATVPPPLIAANRASLMQL 120 AS M EAVAPYVAWM A A QAEQAA+QARAAAAA+E AFAA VPPPLIAANRA L L Sbjct 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120 Query 121 ISTNVFGQNTSAIAAAEAQYGEMWAQDSAAMYAYAGSSASASAVTPFSTPPQIANPTAQG 180 ++ NVFGQNT++IAA EAQY EMWAQD+ AMY YAGSSA+A+ VTPF+ PP +P+A Sbjct 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180 Query 181 TQAAAVATAAGT----AQSTLTEMITGLPNALQSLTSPLLQSSNGPLSWLWQILFGTPNF 236 TQ +AVA AAGT AQS + E+I LPN L LTSPL + TP + Sbjct 181 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLTSPLSSALTAA---------ATPGW 231 Query 237 PTSISALLTDLQPYASFFYNTEGLPYFSIGMGNNFIQSAKTLGLIGSAAPAAVAAAGDAA 296 + + P + FYNT GLPYF+IG+GN+ I S + LG IG A A AAA A Sbjct 232 ---LEWFINWYLPISQLFYNTVGLPYFAIGIGNSLITSWRALGWIGPEAAEAAAAAPAAV 288 Query 297 KGLPGLGGMLGGGPVAAGLGNAASVGKLSVPPVWSGPLPG---SVTPGAAPLPVSTVSAA 353 + G GPV+AGLGNAA++GKLSVPP W+G P +V +APL VS + Sbjct 289 G-----AAVGGTGPVSAGLGNAATIGKLSVPPNWAGASPSLAPTVGSASAPL-VSDIVEQ 342 Query 354 PEA-APGSLLGGLPL--AGAGGAGAGPRYGFRPTVMARPPFAG 393 PEA A G+LLGG+PL G G GAGPRYGFR TVM+RPPFAG Sbjct 343 PEAGAAGNLLGGMPLAGPGTGTGGAGPRYGFRVTVMSRPPFAG 385 >gi|254550715|ref|ZP_05141162.1| PPE family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] Length=385 Score = 344 bits (883), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 243/403 (61%), Positives = 281/403 (70%), Gaps = 28/403 (6%) Query 1 MDFGALPPEVNSVRMYAGPGSAPMVAAASAWNGLAAELSSAATGYETVITQLSSEGWLGP 60 MDFGALPPEVNS RMY GPGSAPMVAAASAWNGLAAELS AA GYE VIT L +E WLGP Sbjct 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60 Query 61 ASAAMAEAVAPYVAWMSAAAAQAEQAATQARAAAAAFEAAFAATVPPPLIAANRASLMQL 120 AS M EAVAPYVAWM A A QAEQAA+QARAAAAA+E AFAA VPPPLIAANRA L L Sbjct 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120 Query 121 ISTNVFGQNTSAIAAAEAQYGEMWAQDSAAMYAYAGSSASASAVTPFSTPPQIANPTAQG 180 ++ NVFGQNT++IAA EAQY EMWAQD+ AMY YAGSSA+A+ VTPF+ PP +P+A Sbjct 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180 Query 181 TQAAAVATAAGT----AQSTLTEMITGLPNALQSLTSPLLQSSNGPLSWLWQILFGTPNF 236 TQ +AVA AAGT AQS + E+I LPN L LTSPL + TP + Sbjct 181 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLTSPLSSALTAA---------ATPGW 231 Query 237 PTSISALLTDLQPYASFFYNTEGLPYFSIGMGNNFIQSAKTLGLIGSAAPAAVAAAGDAA 296 + + P + FYNT GLPYF+ G+GN+ I S + LG IG A A AAA A Sbjct 232 ---LEWFINWYLPISQLFYNTVGLPYFATGIGNSLITSWRALGWIGPEAAEAAAAAPAAV 288 Query 297 KGLPGLGGMLGGGPVAAGLGNAASVGKLSVPPVWSGPLPG---SVTPGAAPLPVSTVSAA 353 + G GPV+AGLGNAA++GKLS+PP W+G P +V +APL VS + Sbjct 289 G-----AAVGGTGPVSAGLGNAATIGKLSLPPNWAGASPSLAPTVGSASAPL-VSDIVEQ 342 Query 354 PEA-APGSLLGGLPL--AGAGGAGAGPRYGFRPTVMARPPFAG 393 PEA A G+LLGG+PL +G G GAGPRYGFR TVM+RPPFAG Sbjct 343 PEAGAAGNLLGGMPLAGSGTGTGGAGPRYGFRVTVMSRPPFAG 385 >gi|121637612|ref|YP_977835.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|121493259|emb|CAL71730.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] Length=385 Score = 344 bits (883), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 244/403 (61%), Positives = 281/403 (70%), Gaps = 28/403 (6%) Query 1 MDFGALPPEVNSVRMYAGPGSAPMVAAASAWNGLAAELSSAATGYETVITQLSSEGWLGP 60 M FGALPPEVNS RMY GPGSAPMVAAASAWNGLAAELS AA GYE VIT L +E WLGP Sbjct 1 MAFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60 Query 61 ASAAMAEAVAPYVAWMSAAAAQAEQAATQARAAAAAFEAAFAATVPPPLIAANRASLMQL 120 AS M EAVAPYVAWM A A QAEQAA+QARAAAAA+E AFAA VPPPLIAANRA L L Sbjct 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120 Query 121 ISTNVFGQNTSAIAAAEAQYGEMWAQDSAAMYAYAGSSASASAVTPFSTPPQIANPTAQG 180 ++ NVFGQNT++IAA EAQY EMWAQD+ AMY YAGSSA+A+ VTPF+ PP +P+A Sbjct 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180 Query 181 TQAAAVATAAGT----AQSTLTEMITGLPNALQSLTSPLLQSSNGPLSWLWQILFGTPNF 236 TQ +AVA AAGT AQS + E+I LPN L LTSPL + TP + Sbjct 181 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLTSPLSSALTAA---------ATPGW 231 Query 237 PTSISALLTDLQPYASFFYNTEGLPYFSIGMGNNFIQSAKTLGLIGSAAPAAVAAAGDAA 296 + + P + FYNT GLPYF+IG+GN+ I S + LG IG A A AAA A Sbjct 232 ---LEWFINWYLPISQLFYNTVGLPYFAIGIGNSLITSWRALGWIGPEAAEAAAAAPAAV 288 Query 297 KGLPGLGGMLGGGPVAAGLGNAASVGKLSVPPVWSGPLPG---SVTPGAAPLPVSTVSAA 353 + G GPV+AGLGNAA++GKLSVPP W+G P +V +APL VS + Sbjct 289 G-----AAVGGTGPVSAGLGNAATIGKLSVPPNWAGASPSLAPTVGSASAPL-VSDIVEQ 342 Query 354 PEA-APGSLLGGLPL--AGAGGAGAGPRYGFRPTVMARPPFAG 393 PEA A G+LLGG+PL +G G GAGPRYGFR TVM+RPPFAG Sbjct 343 PEAGAAGNLLGGMPLAGSGTGTGGAGPRYGFRVTVMSRPPFAG 385 >gi|240171295|ref|ZP_04749954.1| PPE family protein [Mycobacterium kansasii ATCC 12478] Length=400 Score = 342 bits (878), Expect = 5e-92, Method: Compositional matrix adjust. Identities = 245/402 (61%), Positives = 286/402 (72%), Gaps = 11/402 (2%) Query 1 MDFGALPPEVNSVRMYAGPGSAPMVAAASAWNGLAAELSSAATGYETVITQLSSEGWLGP 60 MD+G LPPEVNS RMY GPGS M AAASAW+ LAAEL SAA GYET++ QL+ EGWLGP Sbjct 1 MDYGGLPPEVNSARMYTGPGSMSMTAAASAWSALAAELDSAAAGYETLVDQLAGEGWLGP 60 Query 61 ASAAMAEAVAPYVAWMSAAAAQAEQAATQARAAAAAFEAAFAATVPPPLIAANRASLMQL 120 AS AMA AVAPYV WM A AAQAEQ A QARAAAAA+E A AA VPPP I ANR L +L Sbjct 61 ASTAMAAAVAPYVVWMRATAAQAEQTAMQARAAAAAYENAVAAMVPPPAILANRLQLAEL 120 Query 121 ISTNVFGQNTSAIAAAEAQYGEMWAQDSAAMYAYAGSSASASAVTPFSTPPQIANPTAQG 180 + +NV+GQNTSAIAA EAQYG+MWAQD+ AMY YA ++ SA+ +TPF+ PP I NP Sbjct 121 MQSNVYGQNTSAIAALEAQYGQMWAQDATAMYEYAAATGSATTLTPFNQPPHIVNPAGAS 180 Query 181 TQ----AAAVATAAGTAQSTLTEMITGLPNALQSLTSPLLQS-SNGPLSWLWQILFGTPN 235 Q A AT+AG +QS L +I+G+P LQ L +P+ + S+ PL+WLWQILFGT Sbjct 181 GQTAAVTHAAATSAGASQSALARLISGIPTMLQGLATPVASAVSSSPLAWLWQILFGTST 240 Query 236 FPTSISALLTDLQPYASFFYNTEGLPYFSIGMGNNFIQSAKTLGLIGSAAPAAVAAAGDA 295 FPTSI+ALLTDLQPYASF YNTEGLPYFSIGM NNF+QS+KTLGL+G A AA A Sbjct 241 FPTSIAALLTDLQPYASFLYNTEGLPYFSIGMANNFVQSSKTLGLLGGTA-AAAAGGAAQ 299 Query 296 AKGLPGLGGMLGGGPVAAGLGNAASVGKLSVPPVWSGPLPGSVTPGAAPLPVSTVSAAPE 355 + GGGPV+AGLG+A S+G+LSVPP W+ LP V A +PV T AP+ Sbjct 300 GGLAGLGSLVGGGGPVSAGLGHAGSIGRLSVPPSWAQALP-DVESIPARMPVETFKFAPD 358 Query 356 AA----PGSLLGGLPLAGAGGAGAGPRYGFRPTVMARPPFAG 393 AA + G G G+GPRYG RPTVMARPPFAG Sbjct 359 AAGSGNLLGGMPLGGPMGHGATGSGPRYGVRPTVMARPPFAG 400 >gi|307079711|ref|ZP_07488881.1| PPE family protein [Mycobacterium tuberculosis SUMu011] gi|308362459|gb|EFP51310.1| PPE family protein [Mycobacterium tuberculosis SUMu011] Length=376 Score = 327 bits (838), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 230/386 (60%), Positives = 267/386 (70%), Gaps = 27/386 (6%) Query 1 MDFGALPPEVNSVRMYAGPGSAPMVAAASAWNGLAAELSSAATGYETVITQLSSEGWLGP 60 MDFGALPPEVNS RMY GPGSAPMVAAASAWNGLAAELS AA GYE VIT L +E WLGP Sbjct 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60 Query 61 ASAAMAEAVAPYVAWMSAAAAQAEQAATQARAAAAAFEAAFAATVPPPLIAANRASLMQL 120 AS M EAVAPYVAWM A A QAEQAA+QARAAAAA+E AFAA VPPPLIAANRA L L Sbjct 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120 Query 121 ISTNVFGQNTSAIAAAEAQYGEMWAQDSAAMYAYAGSSASASAVTPFSTPPQIANPTAQG 180 ++ NVFGQNT++IAA EAQY EMWAQD+ AMY YAGSSA+A+ VTPF+ PP +P+A Sbjct 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180 Query 181 TQAAAVATAAGT----AQSTLTEMITGLPNALQSLTSPLLQSSNGPLSWLWQILFGTPNF 236 TQ +AVA AAGT AQS + E+I LPN L LTSPL + TP + Sbjct 181 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLTSPLSSALTAA---------ATPGW 231 Query 237 PTSISALLTDLQPYASFFYNTEGLPYFSIGMGNNFIQSAKTLGLIGSAAPAAVAAAGDAA 296 + + P + FYNT GLPYF+IG+GN+ I S + LG IG A A AAA A Sbjct 232 ---LEWFINWYLPISQLFYNTVGLPYFAIGIGNSLITSWRALGWIGPEAAEAAAAAPAAV 288 Query 297 KGLPGLGGMLGGGPVAAGLGNAASVGKLSVPPVWSGPLPG---SVTPGAAPLPVSTVSAA 353 + G GPV+AGLGNAA++GKLS+PP W+G P +V +APL VS + Sbjct 289 GAA-----VGGTGPVSAGLGNAATIGKLSLPPNWAGASPSLAPTVGSASAPL-VSDIVEQ 342 Query 354 PEA-APGSLLGGLPLAGAGGAGAGPR 378 PEA A G+LLGG+PLAG+ G G G R Sbjct 343 PEAGAAGNLLGGMPLAGS-GTGTGVR 367 >gi|118617327|ref|YP_905659.1| PPE family protein [Mycobacterium ulcerans Agy99] gi|118569437|gb|ABL04188.1| PPE family protein [Mycobacterium ulcerans Agy99] Length=392 Score = 314 bits (804), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 229/407 (57%), Positives = 269/407 (67%), Gaps = 29/407 (7%) Query 1 MDFGALPPEVNSVRMYAGPGSAPMVAAASAWNGLAAELSSAATGYETVITQLSSEGWLGP 60 MDFGALPPEVNS RMY GPGS PMV+AASAWN LA+ELS A GYE VI LS E W GP Sbjct 1 MDFGALPPEVNSGRMYTGPGSTPMVSAASAWNRLASELSFTADGYERVIKALSGEEWFGP 60 Query 61 ASAAMAEAVAPYVAWMSAAAAQAEQAATQARAAAAAFEAAFAATVPPPLIAANRASLMQL 120 ASA M EA+ PYV WM + A QAE+AA QA AA AAFEAAF VPPPLIA+NR LM L Sbjct 61 ASAMMLEAITPYVTWMRSTAVQAERAAKQAEAAVAAFEAAFTGVVPPPLIASNRMQLMTL 120 Query 121 ISTNVFGQNTSAIAAAEAQYGEMWAQDSAAMYAYAGSSASASAVTPFSTPPQIANPTAQG 180 ++ N++GQ T+ IA+ EAQY EMWAQD+ AMY YAGSSASA+ +T F+ PP+ ANP A Sbjct 121 MARNIYGQYTAEIASLEAQYAEMWAQDARAMYTYAGSSASATKITAFTPPPETANPAASA 180 Query 181 TQA----AAVATAAGTAQSTLTEMITGLPNALQSLTSPL---LQSSNGPLSWLWQILFGT 233 Q+ A ATAAG AQSTL +I+ LPNAL SLTSP+ L S+ P +W Sbjct 181 LQSNATSTAAATAAGAAQSTLAGVISQLPNALTSLTSPIASALTSAASPATW-------- 232 Query 234 PNFPTSISALLTDLQPYASFFYNTEGLPYFSIGMGNNFIQSAKTLGLI-GSAAPAAVAAA 292 I L+ P + FYNT GLPYF+IG+G++ I S + LGLI A AA A Sbjct 233 ------IDWLVNWYLPISQLFYNTVGLPYFAIGIGSSLITSERALGLIGPEAEAAAAGAG 286 Query 293 GDAAKGLPGLGGMLGGGPVAAGLGNAASVGKLSVPPVWSG---PLPGSVTPGAAPLPVST 349 A + G GP+ AGLGNA+++GKLSVPP W G +P SV+ G PL Sbjct 287 AAEAAAGAAPAALGGAGPIGAGLGNASALGKLSVPPSWPGSGLDVPPSVSAG-GPLASDI 345 Query 350 VSAAPEAAPGSLLGGLPL---AGAGGAGAGPRYGFRPTVMARPPFAG 393 V+ +APGSLLGG+PL G AGAGPRYGFR TVMARPPFAG Sbjct 346 VNPPEASAPGSLLGGMPLAGGPGGAAAGAGPRYGFRVTVMARPPFAG 392 >gi|167969175|ref|ZP_02551452.1| PPE family protein [Mycobacterium tuberculosis H37Ra] Length=356 Score = 310 bits (795), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 213/358 (60%), Positives = 248/358 (70%), Gaps = 22/358 (6%) Query 1 MDFGALPPEVNSVRMYAGPGSAPMVAAASAWNGLAAELSSAATGYETVITQLSSEGWLGP 60 MDFGALPPEVNS RMY GPGSAPMVAAASAWNGLAAELS AA GYE VIT L +E WLGP Sbjct 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60 Query 61 ASAAMAEAVAPYVAWMSAAAAQAEQAATQARAAAAAFEAAFAATVPPPLIAANRASLMQL 120 AS M EAVAPYVAWM A A QAEQAA+QARAAAAA+E AFAA VPPPLIAANRA L L Sbjct 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120 Query 121 ISTNVFGQNTSAIAAAEAQYGEMWAQDSAAMYAYAGSSASASAVTPFSTPPQIANPTAQG 180 ++ NVFGQNT++IAA EAQY EMWAQD+ AMY YAGSSA+A+ VTPF+ PP +P+A Sbjct 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180 Query 181 TQAAAVATAAGT----AQSTLTEMITGLPNALQSLTSPLLQSSNGPLSWLWQILFGTPNF 236 TQ +AVA AAGT AQS + E+I LPN L LTSPL + TP + Sbjct 181 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLTSPLSSALTAA---------ATPGW 231 Query 237 PTSISALLTDLQPYASFFYNTEGLPYFSIGMGNNFIQSAKTLGLIGSAAPAAVAAAGDAA 296 + + P + FYNT GLPYF+IG+GN+ I S + LG IG A A AAA A Sbjct 232 ---LEWFINWYLPISQLFYNTVGLPYFAIGIGNSLITSWRALGWIGPEAAEAAAAAPAAV 288 Query 297 KGLPGLGGMLGGGPVAAGLGNAASVGKLSVPPVWSGPLPGSV-TPGAAPLPVSTVSAA 353 + G GPV+AGLGNAA++GKLS+PP W+G P T G+A P S +S++ Sbjct 289 G-----AAVGGTGPVSAGLGNAATIGKLSLPPNWAGASPSLAPTVGSASAPWSAISSS 341 >gi|183982531|ref|YP_001850822.1| PPE family protein [Mycobacterium marinum M] gi|183175857|gb|ACC40967.1| PPE family protein [Mycobacterium marinum M] Length=392 Score = 301 bits (772), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 229/407 (57%), Positives = 269/407 (67%), Gaps = 29/407 (7%) Query 1 MDFGALPPEVNSVRMYAGPGSAPMVAAASAWNGLAAELSSAATGYETVITQLSSEGWLGP 60 MDFGALPPEVNS RMY GPGS PMV+AASAWN LA+ELS A GYE VI LS E W GP Sbjct 1 MDFGALPPEVNSGRMYTGPGSTPMVSAASAWNRLASELSFTADGYERVIKALSGEEWFGP 60 Query 61 ASAAMAEAVAPYVAWMSAAAAQAEQAATQARAAAAAFEAAFAATVPPPLIAANRASLMQL 120 ASA M EA+ PYV WM + A QAEQAA QA AA AAFEAAF VPPPLIA+NR LM L Sbjct 61 ASAMMLEAITPYVTWMRSTAVQAEQAAKQAEAAVAAFEAAFTGVVPPPLIASNRMQLMTL 120 Query 121 ISTNVFGQNTSAIAAAEAQYGEMWAQDSAAMYAYAGSSASASAVTPFSTPPQIANPTAQG 180 ++ N++GQ T+ IA+ EAQ EMWAQD+ AMY YAGSSASA+ +T F+ PP+ ANP A Sbjct 121 MARNIYGQYTAEIASLEAQDAEMWAQDARAMYTYAGSSASATKITAFTPPPETANPAASA 180 Query 181 TQA----AAVATAAGTAQSTLTEMITGLPNALQSLTSPL---LQSSNGPLSWLWQILFGT 233 Q+ A ATAAG AQSTL +I+ LPNAL SLTSP+ L S+ P +W Sbjct 181 LQSNATSTAAATAAGAAQSTLAGVISQLPNALTSLTSPIASALTSAASPATW-------- 232 Query 234 PNFPTSISALLTDLQPYASFFYNTEGLPYFSIGMGNNFIQSAKTLGLI-GSAAPAAVAAA 292 I L+ P + FYNT GLPYF+IG+G++ I S + LGLI A AA A Sbjct 233 ------IDWLVNWYLPISQLFYNTVGLPYFAIGIGSSLITSERALGLIGPEAEAAAAGAG 286 Query 293 GDAAKGLPGLGGMLGGGPVAAGLGNAASVGKLSVPPVWSG---PLPGSVTPGAAPLPVST 349 A + G GP+ AGLGNA+++GKLSVPP W+G +P SV+ G PL Sbjct 287 AAEAAAGAAPAALGGAGPIGAGLGNASALGKLSVPPSWAGSGLDVPPSVSAG-GPLASDI 345 Query 350 VSAAPEAAPGSLLGGLPL---AGAGGAGAGPRYGFRPTVMARPPFAG 393 V+ +APGSLLGG+PL G AGAGPRYGFR TVMARPPFAG Sbjct 346 VNPPEASAPGSLLGGMPLAGGPGGAAAGAGPRYGFRVTVMARPPFAG 392 >gi|240170165|ref|ZP_04748824.1| PPE family protein [Mycobacterium kansasii ATCC 12478] Length=393 Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 238/402 (60%), Positives = 285/402 (71%), Gaps = 18/402 (4%) Query 1 MDFGALPPEVNSVRMYAGPGSAPMVAAASAWNGLAAELSSAATGYETVITQLSSEGWLGP 60 MDFGALPPEVNS R+YAGPGSAP+VAAASAW+GLA+ELSSAA GY+ V+T L +E WLGP Sbjct 1 MDFGALPPEVNSGRLYAGPGSAPLVAAASAWSGLASELSSAADGYQRVVTTLHAEEWLGP 60 Query 61 ASAAMAEAVAPYVAWMSAAAAQAEQAATQARAAAAAFEAAFAATVPPPLIAANRASLMQL 120 AS M EAVAPY+AWM AAAAQAEQAA+QARAAAAAFE AFA+ VPPPLIAANRA L L Sbjct 61 ASTLMIEAVAPYLAWMRAAAAQAEQAASQARAAAAAFETAFASVVPPPLIAANRAQLASL 120 Query 121 ISTNVFGQNTSAIAAAEAQYGEMWAQDSAAMYAYAGSSASASAVTPFSTPPQIANPTAQG 180 I+ NV+GQ +AIAA EAQY EMWAQD+ AMY+YAGSSASA+ +TP++ PP I +P A Sbjct 121 IAKNVYGQYGAAIAALEAQYAEMWAQDARAMYSYAGSSASAAQLTPYTPPPHITSPAAAA 180 Query 181 TQAA----AVATAAGTAQSTLTEMITGLPNALQSLTSPLLQSSNGPLSWLWQILFGTPNF 236 TQ+A AVAT+AG AQ+TL+ +I+ LP+ L L SP+ + N G + Sbjct 181 TQSAAVTQAVATSAGAAQNTLSGLISELPSMLLGLASPISSALNA---------GGLTSN 231 Query 237 PTSISALLTDLQPYASFFYNTEGLPYFSIGMGNNFIQSAKTLGLIGSAAP--AAVAAAGD 294 P + L+ P + YNT GLPYF+IG+GN+ I S + LG IG AA + +AA Sbjct 232 PGWLQWLIDWYMPISQLIYNTVGLPYFAIGIGNSLITSWRALGWIGPAASEISETSAAAA 291 Query 295 AAKGLPGLGGMLGGGPVAAGLGNAASVGKLSVPPVWS-GPLPGSVTPGAAPLPVSTVSAA 353 AA + G GPV AGLGNA+++GKLSVPP WS P PG AAPL V+ Sbjct 292 AAAAGAAPAALGGAGPVTAGLGNASALGKLSVPPTWSANPGPGPAVADAAPLASDIVNPP 351 Query 354 PEAAPGSLLGGLPL--AGAGGAGAGPRYGFRPTVMARPPFAG 393 APGSLLGG+PL GA AGAGP+YGFR TVM+RPPFAG Sbjct 352 EVGAPGSLLGGMPLAGPGAAAAGAGPKYGFRVTVMSRPPFAG 393 >gi|183981114|ref|YP_001849405.1| PPE family protein [Mycobacterium marinum M] gi|183174440|gb|ACC39550.1| PPE family protein [Mycobacterium marinum M] Length=380 Score = 301 bits (770), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 209/402 (52%), Positives = 264/402 (66%), Gaps = 31/402 (7%) Query 1 MDFGALPPEVNSVRMYAGPGSAPMVAAASAWNGLAAELSSAATGYETVITQLSSEGWLGP 60 MDFG LPPE+NS RMY+GPGS+P++ ASAW+GLAAELS+ A YETVI+ L S+GW+GP Sbjct 1 MDFGILPPEINSARMYSGPGSSPLLTVASAWSGLAAELSATANDYETVISGLQSQGWVGP 60 Query 61 ASAAMAEAVAPYVAWMSAAAAQAEQAATQARAAAAAFEAAFAATVPPPLIAANRASLMQL 120 +S AMA ++ PYVAW+ A AA EQ+A++AR AA+A+EAAFAATVPPP IAANRA L L Sbjct 61 SSEAMANSIWPYVAWLRATAAATEQSASKARIAASAYEAAFAATVPPPQIAANRAELTGL 120 Query 121 ISTNVFGQNTSAIAAAEAQYGEMWAQDSAAMYAYAGSSASASAVTPFSTPPQIANPTAQG 180 ISTNV GQN++AIAAAEAQYGEMW+QD+A MYAYA S A+A+++TPF +PPQ NPTA Sbjct 121 ISTNVVGQNSAAIAAAEAQYGEMWSQDAATMYAYAASCATATSLTPFVSPPQTTNPTAAA 180 Query 181 TQAAAVAT----AAGTAQSTLTEMITGLPNALQSLTSPL---LQSSNGPLSWLWQILFGT 233 TQA ++ GTAQSTL+ +I+ +P LQ+LTSPL S+ GP Sbjct 181 TQAGTLSRAAATTTGTAQSTLSRLISEVPGVLQALTSPLASAASSTAGP----------- 229 Query 234 PNFPTSISALLTDLQPYASFFYNTEGLPYFSIGMGNNFIQSAKTLGLIGSAAPAAVAAAG 293 I L P+A+FFY+T GLP+F G+ + F +AKT G IG AA A A Sbjct 230 ------IERFLEWYAPFANFFYDTLGLPFFGAGITSFFAATAKTAGAIGPAAAAPAATVA 283 Query 294 DAAKGLPGLGGMLGGGPVAAGLGNAASVGKLSVPPVWSGPLPGSVTPGAAPLPVSTVSAA 353 +G GPV+A L A++VGKLSVP W G P + A+ + Sbjct 284 ATGAAE-----AVGAGPVSASLAQASTVGKLSVPHTWEGATPATSPTTASKFISDVIEPE 338 Query 354 PEAAPGSLLGGLPL--AGAGGAGAGPRYGFRPTVMARPPFAG 393 A G+++GG+P+ G G AGAGPRYG R TVM PP AG Sbjct 339 SVEAGGNVIGGVPMPGPGKGSAGAGPRYGVRLTVMPHPPSAG 380 >gi|118616629|ref|YP_904961.1| PPE family protein [Mycobacterium ulcerans Agy99] gi|118568739|gb|ABL03490.1| PPE family protein [Mycobacterium ulcerans Agy99] Length=380 Score = 295 bits (754), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 212/402 (53%), Positives = 265/402 (66%), Gaps = 31/402 (7%) Query 1 MDFGALPPEVNSVRMYAGPGSAPMVAAASAWNGLAAELSSAATGYETVITQLSSEGWLGP 60 MDF LPPE+NS RMY+GPGS+P++ ASAW+GLAAELS+ A YETVI+ L S+GW+GP Sbjct 1 MDFRILPPEINSARMYSGPGSSPLLTVASAWSGLAAELSATANDYETVISGLQSQGWVGP 60 Query 61 ASAAMAEAVAPYVAWMSAAAAQAEQAATQARAAAAAFEAAFAATVPPPLIAANRASLMQL 120 +S AMA ++ PYVAW+ A AA EQ+A++AR AA+A+EAAFAATVPPP IAANRA L L Sbjct 61 SSEAMANSIWPYVAWLRATAAATEQSASKARIAASAYEAAFAATVPPPQIAANRAELTGL 120 Query 121 ISTNVFGQNTSAIAAAEAQYGEMWAQDSAAMYAYAGSSASASAVTPFSTPPQIANPTAQG 180 ISTNV GQN++AIAAAEAQYGEMW+QD+A MYAYA S A+A++VTPF +PPQ +PTA Sbjct 121 ISTNVVGQNSAAIAAAEAQYGEMWSQDAATMYAYAASCATATSVTPFVSPPQTTSPTAAA 180 Query 181 TQ----AAAVATAAGTAQSTLTEMITGLPNALQSLTSPL---LQSSNGPLSWLWQILFGT 233 TQ A A AT AGTAQSTL+ +I+ +P LQ+LTSPL S+ GP Sbjct 181 TQAGTLARAAATTAGTAQSTLSRLISEVPGVLQALTSPLASAASSTAGP----------- 229 Query 234 PNFPTSISALLTDLQPYASFFYNTEGLPYFSIGMGNNFIQSAKTLGLIGSAAPAAVAAAG 293 I L P+A+FFY+T GLP+F G+ + F +AKT G IG AA A A Sbjct 230 ------IERFLEWYAPFANFFYDTLGLPFFGAGITSLFAATAKTAGAIGPAAAAPAATVA 283 Query 294 DAAKGLPGLGGMLGGGPVAAGLGNAASVGKLSVPPVWSGPLPGSVTPGAAPLPVSTVSAA 353 +G GPV+A L A++VGKLSVP W G P + A+ + Sbjct 284 ATGAAE-----AVGAGPVSASLAQASTVGKLSVPHTWEGATPATSPTTASKFISDVIEPE 338 Query 354 PEAAPGSLLGGLPL--AGAGGAGAGPRYGFRPTVMARPPFAG 393 A G+++GG+P+ G G AGAGPRYG R TVM PP AG Sbjct 339 SVEAGGNVIGGVPMPGPGEGSAGAGPRYGVRLTVMPHPPSAG 380 >gi|342861308|ref|ZP_08717956.1| PPE family protein [Mycobacterium colombiense CECT 3035] gi|342131208|gb|EGT84489.1| PPE family protein [Mycobacterium colombiense CECT 3035] Length=410 Score = 293 bits (749), Expect = 5e-77, Method: Compositional matrix adjust. Identities = 216/421 (52%), Positives = 267/421 (64%), Gaps = 40/421 (9%) Query 1 MDFGALPPEVNSVRMYAGPGSAPMVAAASAWNGLAAELSSAATGYETVITQLSSEGWLGP 60 +D+GA PPE NS R+Y+GPGS+ + AASAW+ LAAEL+SAA YE V+T LSSE W G Sbjct 2 VDYGAFPPEFNSARIYSGPGSSSLATAASAWSSLAAELNSAALSYEKVVTSLSSEEWTGA 61 Query 61 ASAAMAEAVAPYVAWMSAAAAQAEQAATQARAAAAAFEAAFAATVPPPLIAANRASLMQL 120 ASA MA+A P+V WM++ AAQAE+AATQA +AA+A+E A +++VPPPLIA+NR +L Sbjct 62 ASAEMAQAAEPFVEWMTSTAAQAEEAATQAHSAASAYETALSSSVPPPLIASNRTQATEL 121 Query 121 ISTNVFGQNTSAIAAAEAQYGEMWAQDSAAMYAYAGSSASASAVTPFSTPPQIANPTAQG 180 + NV GQNT IA EAQYGE WAQD+AAMY YAG S+SA+ V+ F PQ+ NP + Sbjct 122 HAKNVLGQNTPLIAQLEAQYGEYWAQDAAAMYRYAGQSSSATKVSQFRKAPQVTNPAGKA 181 Query 181 TQAAAVATAAGTAQSTLTEMITGLPNAL-----------------QSLTSPLLQSSNGPL 223 TQ+AAV A T T + P AL +S +SS P+ Sbjct 182 TQSAAVTNA------TTTSPASNTPKALAAASSGTSGGSSGSAAAGGASSAATKSSTDPM 235 Query 224 SWLWQILFGTPNFPTSISALLTDLQPYASFFYNTEGLPYFSIGMGNNFIQSAKTLGLIGS 283 S W +L G +FP+++ +L+ P+A FYNTEGLPYFS GM N+F Q AK++G IG Sbjct 236 SEAWFLLTGQSSFPSNLGSLVNGYSPFAGLFYNTEGLPYFSTGMANSFTQIAKSVGAIGG 295 Query 284 AAPAAVAAAGDAAKGLPGLGGMLGGGPVAAGLGNAASV-GKLSVPPVWSGPLPGSVTPGA 342 AAPA A LGG A LG A SV GKLSVP WSG GA Sbjct 296 AAPAVAKALPGLGGLGGMLGGGAAAAHPVAALGGATSVGGKLSVPITWSG------ASGA 349 Query 343 AP-----LPVSTVSAAPEAA--PGSLLGGLPLA---GAGGAGAGPRYGFRPTVMARPPFA 392 AP +PVS+VSAAPEAA PG+LLGG+PL+ G AGP+YGFRPTVMARPPFA Sbjct 350 APAVGHAVPVSSVSAAPEAAGEPGNLLGGMPLSGAGAGGHGVAGPKYGFRPTVMARPPFA 409 Query 393 G 393 G Sbjct 410 G 410 >gi|240171969|ref|ZP_04750628.1| PPE family protein [Mycobacterium kansasii ATCC 12478] Length=396 Score = 291 bits (745), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 224/412 (55%), Positives = 279/412 (68%), Gaps = 36/412 (8%) Query 1 MDFGALPPEVNSVRMYAGPGSAPMVAAASAWNGLAAELSSAATGYETVITQLSSEGWLGP 60 +DFG LPPEV S+RMY+GPGSAPM+AAASAW+GLAAEL++ A YET++ +L SE W+GP Sbjct 2 IDFGVLPPEVTSIRMYSGPGSAPMLAAASAWSGLAAELTATADDYETIVARLQSEDWIGP 61 Query 61 ASAAMAEAVAPYVAWMSAAAAQAEQAATQARAAAAAFEAAFAATVPPPLIAANRASLMQL 120 A+ +MA AV PYVAWM A AAQAEQ ATQAR AA+EAA AA VPPPL+A NRA + L Sbjct 62 AATSMAGAVQPYVAWMRATAAQAEQTATQARMLVAAYEAAVAAVVPPPLVAGNRAQVALL 121 Query 121 ISTNVFGQNTSAIAAAEAQYGEMWAQDSAAMYAYAGSSASASAVTPFSTPPQIANPTAQG 180 +STNVFGQNTS +A EA+YG+MW QD+ AMY YA +SA+AS +TPF++P Q +P+A Sbjct 122 VSTNVFGQNTSRVALLEAEYGDMWTQDATAMYVYAAASANASRLTPFTSPTQTTSPSASA 181 Query 181 TQAAAVATAAGTA----QSTLTEMITGLPNALQSLTSPL--LQSSNG----PLSW-LWQI 229 Q AAVA AAGTA Q+ L+++++ PNAL L +PL L +S G P +W +W Sbjct 182 WQGAAVAKAAGTAAGGIQNLLSKLVSQAPNALLDLATPLSSLLASAGAAPTPPTWVVW-- 239 Query 230 LFGTPNFPTSISALLTDLQPYASFFYNTEGLPYFSIGMGNNFIQSAKTLGLIGSAAPAAV 289 + L + P +YN GLPYF IG+ N+ +A+ +G IG P Sbjct 240 ----------LEDFLNLIAPLTGTWYNVTGLPYFGIGITNSLASTARAVGAIG---PEVG 286 Query 290 AAAGDAAKGLPGLGGMLG-GGPVAAGLGNAASVGKLSVPPVWS--GPLPG-SVTPGAAPL 345 AAA A G LG G P+AAG+GNA +VGKLSVPP WS GP+P SV +APL Sbjct 287 AAAASAGGAAADAAGTLGRGAPIAAGMGNAPAVGKLSVPPGWSATGPVPVPSVGSVSAPL 346 Query 346 PVSTVSAAPEAAPGS--LLGGLPLAGAG--GAGAGPRYGFRPTVMARPPFAG 393 VS + A PEAA S +LGG+PLAG G AG+ PRYGFRP VM RPPFAG Sbjct 347 -VSNI-ALPEAASESSNMLGGMPLAGPGVNAAGSAPRYGFRPKVMVRPPFAG 396 >gi|212596789|gb|ACJ35606.1| PPE45 [Mycobacterium intracellulare ATCC 13950] Length=391 Score = 285 bits (728), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 214/406 (53%), Positives = 265/406 (66%), Gaps = 29/406 (7%) Query 1 MDFGALPPEVNSVRMYAGPGSAPMVAAASAWNGLAAELSSAATGYETVITQLSSEGWLGP 60 +DFGALPPE++S RMY+GPGSA M+AAA AWN LAAEL SAA Y+ +ITQL SE W+GP Sbjct 2 LDFGALPPEIHSERMYSGPGSASMMAAAWAWNLLAAELDSAANDYDRIITQLVSEEWMGP 61 Query 61 ASAAMAEAVAPYVAWMSAAAAQAEQAATQARAAAAAFEAAFAATVPPPLIAANRASLMQL 120 ASA MAEA PYVAWM A QAEQAA ARAAA A+EAAFAATVPPPLI ANRA L+Q Sbjct 62 ASAQMAEAAKPYVAWMRTTAMQAEQAAVSARAAAGAYEAAFAATVPPPLIEANRAQLVQA 121 Query 121 ISTNVFGQNTSAIAAAEAQYGEMWAQDSAAMYAYAGSSASASAVTPFSTPPQIANPTAQG 180 +STNV GQNT I E QY EMWAQD+ AMY YAG +A + VTPF+ P + NP + Sbjct 122 VSTNVLGQNTPLIVQLETQYAEMWAQDATAMYGYAGQAAPVTQVTPFTRPAETTNPAGEA 181 Query 181 TQAAAVATAAGT---AQSTLTEMITGLPNALQSLTSPLLQSSNGPLSWLWQILFGTPNFP 237 QAA+VA AAGT A+S +++++ +P LQ+L+SP ++N L + +L P F Sbjct 182 MQAASVAQAAGTSAGAESAQSQLLSSVPPTLQALSSP--AAANTELPPITDVLEQNPVF- 238 Query 238 TSISALLTDL-QPYASFFYNTEGLPYFSIGMGNNFIQSAKTLG------LIGSAAPAAVA 290 D+ YAS NT + Y GM +F+ +K L G+ A A++ Sbjct 239 --------DMWAEYASPAQNTLAMMYRVTGMSTHFLSLSKGLAPAAKAASEGAKAAASLP 290 Query 291 AAGDAAKGLPGLGGMLGGGPVAAGLGNAASVGKLSVPPVWSGPLPGSVTPGAAPLPVSTV 350 A G + +GL G GGG ++A L +AA VG LSVPP W+ +V GA+ +PVS Sbjct 291 AVGASLRGLTG-----GGGAISATLASAAPVGGLSVPPAWTSAAGPAVASGASSIPVSRF 345 Query 351 SAAPEAA-PGSLLGGLPLA--GAGGAGAGPRYGFRPTVMARPPFAG 393 PE + PG+LLGG+PLA G G GAGPRYG RPTVMARPPFAG Sbjct 346 ITTPETSGPGNLLGGMPLAGVGGGSTGAGPRYGIRPTVMARPPFAG 391 >gi|183982678|ref|YP_001850969.1| PPE family protein, PPE26 [Mycobacterium marinum M] gi|183176004|gb|ACC41114.1| PPE family protein, PPE26 [Mycobacterium marinum M] Length=408 Score = 284 bits (727), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 219/408 (54%), Positives = 260/408 (64%), Gaps = 25/408 (6%) Query 1 MDFGALPPEVNSVRMYAGPGSAPMVAAASAWNGLAAELSSAATGYETVITQLSSEGWLGP 60 MD+G LPPEV S MYAGPGS+ MVAAASAWN LAAEL+S A GY TVITQLSSE W+GP Sbjct 3 MDYGMLPPEVTSALMYAGPGSSSMVAAASAWNALAAELNSTAQGYLTVITQLSSEEWMGP 62 Query 61 ASAAMAEAVAPYVAWMSAAAAQAEQAATQARAAAAAFEAAFAATVPPPLIAANRASLMQL 120 ASA MA+AV PY+ WMS A QAE AATQA++AAAAFE AFAA VPPPLIA NRA L Q Sbjct 63 ASATMAQAVEPYMTWMSVTAGQAEHAATQAQSAAAAFETAFAAVVPPPLIATNRAELTQA 122 Query 121 ISTNVFGQNTSAIAAAEAQYGEMWAQDSAAMYAYAGSSASASAVTPFSTPPQIANPTAQG 180 + TN+FG N IA EAQY EMWAQD++AMY YA SSA A+ + F+ P IANP A Sbjct 123 LQTNMFGLNNGVIAQLEAQYAEMWAQDASAMYNYAASSALATKIESFTEAPTIANPAAST 182 Query 181 TQ--------AAAVATAAGTAQSTLTEMITGL-----PNALQSLTSPLLQSSNGPLSWLW 227 TQ A + A+ T QS L+++ + L P+ QS S L +SN L+ +W Sbjct 183 TQGAAVSAAQATSAASTQSTVQSFLSQITSQLGQLASPSGTQSFVSQ-LGASNPILTEIW 241 Query 228 QILFGTPNFPTSISALLTDLQPYASFFYNTEGLPYFSIGMGNNFIQSAKTLGLIGSAAPA 287 +L G P ++ + YASFFYNTEGLPYFS+GMGN +Q AKTLGLI A A Sbjct 242 FLLTGQTVLPNNLGTFMQGYSNYASFFYNTEGLPYFSVGMGNFGVQMAKTLGLITQPAAA 301 Query 288 AVAAAGDA-AKGLPGLGGMLGGGPVAAGLGNAASVGKLSVPPVWSGPLPGSVTPGAAPL- 345 A AA G G VAAGLG+ A VG L+VP W G SV P Sbjct 302 AAAALPKVPGLGGALGAIGSAGSQVAAGLGSGAHVGHLAVPASWPG---ASVAEAVRPTV 358 Query 346 -PVSTVSAAPEAAPGSLLGGLPLAGAG---GAGAGPRYGFRPTVMARP 389 VS +PEAA +++GG+P+ G G G+GPRYGF+PTVMARP Sbjct 359 QAVSEPITSPEAA--NVIGGMPVGATGAGRGVGSGPRYGFKPTVMARP 404 >gi|158667960|gb|ABW76444.1| PPE family protein [Mycobacterium avium subsp. avium] Length=396 Score = 278 bits (712), Expect = 8e-73, Method: Compositional matrix adjust. Identities = 218/402 (55%), Positives = 268/402 (67%), Gaps = 16/402 (3%) Query 1 MDFGALPPEVNSVRMYAGPGSAPMVAAASAWNGLAAELSSAATGYETVITQLSSEGWLGP 60 +D+GA PPE NS R+Y+GPGS +V+AASAW+ LAAEL+SAA YE V+T LSSE WLG Sbjct 2 LDYGAFPPEFNSARIYSGPGSGSLVSAASAWSALAAELNSAALSYEQVVTSLSSEEWLGT 61 Query 61 ASAAMAEAVAPYVAWMSAAAAQAEQAATQARAAAAAFEAAFAATVPPPLIAANRASLMQL 120 ASA MA+AV PY+AWM++AAAQAE+AATQARAAAAA+EAA +++VPPPL+A+NR L Sbjct 62 ASAMMAQAVEPYIAWMTSAAAQAEEAATQARAAAAAYEAALSSSVPPPLVASNRMQSKLL 121 Query 121 ISTNVFGQNTSAIAAAEAQYGEMWAQDSAAMYAYAGSSASASAVTPFSTPPQIANPTAQG 180 +TNV GQNT IA EAQYGE WAQD+ AMY+YAG S+SA+ TPF PP+I N + Sbjct 122 QATNVLGQNTPLIAQLEAQYGEYWAQDAGAMYSYAGQSSSATKQTPFKEPPKITNESGTA 181 Query 181 TQAAAVATAAGTAQSTLTEMITGLPNALQSLTSPLLQSSNGPLSWLWQILFGTPNFPTSI 240 Q AAV A + +T T I LQ++ +P +N P + + + Sbjct 182 NQTAAVTNATSNSTATDTSKI------LQTMAAPGSSGTNQPTAGTTPTATAPSSGGSGS 235 Query 241 SA---LLTDLQPYASFFYNTEGLPYFSIGMGNNFIQSAKTLGLIGSAAPAAVAAAGDAAK 297 + L++ P+AS FYNTEGLPYFSIGMGNNF+Q +K+LGLIGSAAPAA A Sbjct 236 GSVSDLVSAYNPFASLFYNTEGLPYFSIGMGNNFVQISKSLGLIGSAAPAAAKALPALGG 295 Query 298 GLPGLGGMLGGGPVAAGLGNAASV-GKLSVPPVWSGPLPGSVTPGAAPLPVSTVSAAPEA 356 LGG A LG+AAS+ GKLSVP WSG + G A +PVST+SAAPEA Sbjct 296 LGGMLGGGAAAAHPVAALGSAASIGGKLSVPVAWSGAPAAAPALGHA-VPVSTISAAPEA 354 Query 357 A--PGSLL---GGLPLAGAGGAGAGPRYGFRPTVMARPPFAG 393 A PG+LL G AGP+YGFRPTVMARPPFAG Sbjct 355 AGGPGNLLGGMPLAGAGAGGHGVAGPKYGFRPTVMARPPFAG 396 >gi|118618470|ref|YP_906802.1| PPE family protein [Mycobacterium ulcerans Agy99] gi|118570580|gb|ABL05331.1| PPE family protein [Mycobacterium ulcerans Agy99] Length=406 Score = 277 bits (708), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 216/408 (53%), Positives = 259/408 (64%), Gaps = 25/408 (6%) Query 1 MDFGALPPEVNSVRMYAGPGSAPMVAAASAWNGLAAELSSAATGYETVITQLSSEGWLGP 60 MD+G LPPEV S MYAGPGS+ MVAAASAWN LAAEL+S A GY TVITQLSSE W+GP Sbjct 1 MDYGMLPPEVTSALMYAGPGSSSMVAAASAWNALAAELNSTAQGYLTVITQLSSEEWMGP 60 Query 61 ASAAMAEAVAPYVAWMSAAAAQAEQAATQARAAAAAFEAAFAATVPPPLIAANRASLMQL 120 ASA MA+AV P++ WMS A QAE AATQA++AAAAFE AFAA VPPPLIA N A L Q Sbjct 61 ASATMAQAVEPFMTWMSVTAGQAEHAATQAQSAAAAFETAFAAVVPPPLIATNLAELTQA 120 Query 121 ISTNVFGQNTSAIAAAEAQYGEMWAQDSAAMYAYAGSSASASAVTPFSTPPQIANPTAQG 180 + TN+FG N IA EAQY EMWAQD++AMY YA SSA A+ + F+ P IA+P A Sbjct 121 LQTNMFGLNNGVIAQLEAQYAEMWAQDASAMYNYAASSALATKIESFTEAPTIASPAAST 180 Query 181 TQ--------AAAVATAAGTAQSTLTEMITGL-----PNALQSLTSPLLQSSNGPLSWLW 227 TQ A + A+ T QS L+++ + L P+ QS S L +SN L+ +W Sbjct 181 TQGAAVSAAQATSAASTQSTVQSFLSQITSQLGQLASPSGTQSFVSQ-LGASNPILTEIW 239 Query 228 QILFGTPNFPTSISALLTDLQPYASFFYNTEGLPYFSIGMGNNFIQSAKTLGLIGSAAPA 287 +L G P ++ + YASFFYNTEGLPYFS+GMGN +Q AKTLGLI A A Sbjct 240 FLLTGQTVLPNNLGTFMQGYSNYASFFYNTEGLPYFSVGMGNFGVQMAKTLGLITQPAAA 299 Query 288 AVAAAGDA-AKGLPGLGGMLGGGPVAAGLGNAASVGKLSVPPVWSGPLPGSVTPGAAPL- 345 A AA G G VAAGLG+ A VG L+VP W G SV P Sbjct 300 AAAALPKVPGLGGALGAIGSAGSQVAAGLGSGAHVGHLAVPASWPG---ASVAEAVRPTV 356 Query 346 -PVSTVSAAPEAAPGSLLGGLPLAGAG---GAGAGPRYGFRPTVMARP 389 VS +PEAA +++GG+P+ G G G+GPRYGF+PTVMARP Sbjct 357 QAVSEPITSPEAA--NVIGGMPVGATGAGRGVGSGPRYGFKPTVMARP 402 >gi|240167786|ref|ZP_04746445.1| PPE family protein [Mycobacterium kansasii ATCC 12478] Length=380 Score = 273 bits (699), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 227/403 (57%), Positives = 280/403 (70%), Gaps = 33/403 (8%) Query 1 MDFGALPPEVNSVRMYAGPGSAPMVAAASAWNGLAAELSSAATGYETVITQLSSEGWLGP 60 MDFGALPPE+NS+R+Y+GPGSAPMVAAASAW+GLAAEL+SAA Y+TVIT L SEGW+GP Sbjct 1 MDFGALPPEINSIRLYSGPGSAPMVAAASAWSGLAAELTSAANEYQTVITALHSEGWVGP 60 Query 61 ASAAMAEAVAPYVAWMSAAAAQAEQAATQARAAAAAFEAAFAATVPPPLIAANRASLMQL 120 ++ MA AVAPYVAWM A AA AEQAA +AR AAAA+E AFAA VPPP IAANRA L L Sbjct 61 SAVTMAAAVAPYVAWMRATAAAAEQAAGKARLAAAAYETAFAAVVPPPQIAANRAQLSTL 120 Query 121 ISTNVFGQNTSAIAAAEAQYGEMWAQDSAAMYAYAGSSASASAVTPFSTPPQIANP---- 176 IS NV GQNT+AIAA E QYG+MWAQD+AAMYAYA +SA+ASAVTPF +PPQ +P Sbjct 121 ISANVVGQNTAAIAATETQYGQMWAQDAAAMYAYAAASATASAVTPFISPPQTTSPAASA 180 Query 177 TAQGTQAAAVATAAGTAQSTLTEMITGLPNALQSLTSPL---LQSSNGPLSWLWQILFGT 233 T +A ATAAG QSTL+ +++ LP L+ L SPL + ++ GP Sbjct 181 TQAAAVTSAAATAAGATQSTLSSLLSELPGVLEGLASPLASAVSATAGP----------- 229 Query 234 PNFPTSISALLTDLQPYASFFYNTEGLPYFSIGMGNNFIQSAKTLGLIGSAAPAAVAAAG 293 I L P+A+F Y+T GLP+F G+ + F +AKT+GLIG AA A AAA Sbjct 230 ------IERFLEWWAPFANFLYDTAGLPFFGAGIASFFASTAKTMGLIGPAAAAPEAAAA 283 Query 294 DAAKGLPGLGGMLGGGPVAAGLGNAASVGKLSVPPVWSGPLPGSVTPGAAPLPVSTV-SA 352 A ++GGGPV+A L A+++GKLSVPP W+G P TP + + VS V Sbjct 284 AAGAAG-----LVGGGPVSASLAQASTIGKLSVPPTWAGASP-VATPTSTSMFVSDVIEP 337 Query 353 APEAAPGSLLGGLPLAGA--GGAGAGPRYGFRPTVMARPPFAG 393 A + G+++GG+P+AG+ G AGAGPRYGFRPTV+ RPP AG Sbjct 338 ADLGSSGNVVGGMPMAGSSRGSAGAGPRYGFRPTVVTRPPSAG 380 >gi|342861306|ref|ZP_08717954.1| PPE family protein [Mycobacterium colombiense CECT 3035] gi|342131206|gb|EGT84487.1| PPE family protein [Mycobacterium colombiense CECT 3035] Length=405 Score = 270 bits (690), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 220/412 (54%), Positives = 263/412 (64%), Gaps = 27/412 (6%) Query 1 MDFGALPPEVNSVRMYAGPGSAPMVAAASAWNGLAAELSSAATGYETVITQLSSEGWLGP 60 +D+GA PPE NS R+Y+GPGS VAAASAW+ LAAEL+SAA Y+ VIT LSSE W G Sbjct 2 VDYGAFPPEFNSARIYSGPGSGSFVAAASAWSALAAELNSAALSYDNVITALSSEEWTGT 61 Query 61 ASAAMAEAVAPYVAWMSAAAAQAEQAATQARAAAAAFEAAFAATVPPPLIAANRASLMQL 120 ASAAMA+A PYV W++ AAQAE+AATQARAAA+A+E A A++VPPPLIAANR QL Sbjct 62 ASAAMAQAAEPYVTWLTTTAAQAEEAATQARAAASAYETALASSVPPPLIAANRTQSQQL 121 Query 121 ISTNVFGQNTSAIAAAEAQYGEMWAQDSAAMYAYAGSSASASAVTPFSTPPQIANPTAQG 180 +TNV GQNT IA EAQYGE WAQD+ AMY+YAG +ASA+ VT F P++ N + Q Sbjct 122 QATNVLGQNTPLIAQLEAQYGEYWAQDAGAMYSYAGQAASATKVTQFQKAPEVTNQSGQA 181 Query 181 TQAAAVATAAGTAQSTLTEMITGLPNALQSL-------------TSPLLQSSNGPLSWLW 227 QAAAV A + +T T LQSL + S+ PLS +W Sbjct 182 NQAAAVTNATANSTATNTS------KTLQSLATPASTTTTSATTATTAATSTTDPLSEVW 235 Query 228 QILFGTPNFPTSISALLTDLQPYASFFYNTEGLPYFSIGMGNNFIQSAKTLGLIGSAAPA 287 +L G + PT++ L+ P+A FYNTEGLPYFS GM N F Q AK++G IG AAPA Sbjct 236 FLLTGQTSLPTNLGTLVNGYSPFAGLFYNTEGLPYFSTGMANTFTQIAKSVGAIGGAAPA 295 Query 288 AVAAAGDAAKGLPGLGGMLGGGPVAAGLGNAASV-GKLSVPPVWSGPLPGSVTPGAAPLP 346 A LGG A LG+AASV GKLSVP WSG P + G A +P Sbjct 296 VAKALPGLGGLGGMLGGGAAAAHPVAALGSAASVGGKLSVPVAWSG-APAAPALGHA-IP 353 Query 347 VSTVSAAPEAA--PGSLL---GGLPLAGAGGAGAGPRYGFRPTVMARPPFAG 393 VS++SAAPEAA PG+LL AG AGP+YGFRPTVMARPPFAG Sbjct 354 VSSISAAPEAAGGPGNLLGGMPLAGAGAAGHGVAGPKYGFRPTVMARPPFAG 405 >gi|254821314|ref|ZP_05226315.1| PPE family protein [Mycobacterium intracellulare ATCC 13950] Length=376 Score = 259 bits (663), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 204/392 (53%), Positives = 252/392 (65%), Gaps = 29/392 (7%) Query 15 MYAGPGSAPMVAAASAWNGLAAELSSAATGYETVITQLSSEGWLGPASAAMAEAVAPYVA 74 MY+GPGSA M+AAA AWN LAAEL SAA Y+ +ITQL SE W+GPASA MAEA PYVA Sbjct 1 MYSGPGSASMMAAAWAWNLLAAELDSAANDYDRIITQLVSEEWMGPASAQMAEAAKPYVA 60 Query 75 WMSAAAAQAEQAATQARAAAAAFEAAFAATVPPPLIAANRASLMQLISTNVFGQNTSAIA 134 WM A QAEQAA ARAAA A+EAAFAATVPPPLI ANRA L+Q +STNV GQNT I Sbjct 61 WMRTTAMQAEQAAVSARAAAGAYEAAFAATVPPPLIEANRAQLVQAVSTNVLGQNTPLIV 120 Query 135 AAEAQYGEMWAQDSAAMYAYAGSSASASAVTPFSTPPQIANPTAQGTQAAAVATAAGT-- 192 E QY EMWAQD+ AMY YAG +A + VTPF+ P + NP + QAA+VA AAGT Sbjct 121 QLETQYAEMWAQDATAMYGYAGQAAPVTQVTPFTRPAETTNPAGEAMQAASVAQAAGTSA 180 Query 193 -AQSTLTEMITGLPNALQSLTSPLLQSSNGPLSWLWQILFGTPNFPTSISALLTDL-QPY 250 A+S +++++ +P LQ+L+SP ++N L + +L P F D+ Y Sbjct 181 GAESAQSQLLSSVPPTLQALSSP--AAANTELPPITDVLEQNPVF---------DMWAEY 229 Query 251 ASFFYNTEGLPYFSIGMGNNFIQSAKTLG------LIGSAAPAAVAAAGDAAKGLPGLGG 304 AS NT + Y GM +F+ +K L G+ A A++ A G + +GL G Sbjct 230 ASPAQNTLAMMYRVTGMSTHFLSLSKGLAPAAKAASEGAKAAASLPAVGASLRGLTG--- 286 Query 305 MLGGGPVAAGLGNAASVGKLSVPPVWSGPLPGSVTPGAAPLPVSTVSAAPEAA-PGSLLG 363 GGG ++A L +AA VG LSVPP W+ +V GA+ +PVS PE + PG+LLG Sbjct 287 --GGGAISATLASAAPVGGLSVPPAWTSAAGPAVASGASSIPVSRFITTPETSGPGNLLG 344 Query 364 GLPLA--GAGGAGAGPRYGFRPTVMARPPFAG 393 G+PLA G G GAGPRYG RPTVMARPPFAG Sbjct 345 GMPLAGVGGGSTGAGPRYGIRPTVMARPPFAG 376 >gi|118466367|ref|YP_882110.1| PPE family protein [Mycobacterium avium 104] gi|118167654|gb|ABK68551.1| ppe family protein [Mycobacterium avium 104] Length=405 Score = 252 bits (644), Expect = 7e-65, Method: Compositional matrix adjust. Identities = 231/413 (56%), Positives = 272/413 (66%), Gaps = 28/413 (6%) Query 1 MDFGALPPEVNSVRMYAGPGSAPMVAAASAWNGLAAELSSAATGYETVITQLSSEGWLGP 60 MD+GA PPE NS R+Y+GPGS +VAAASAW+ LAAEL++AA Y+ V+T L+SE WLG Sbjct 1 MDYGAFPPEFNSARIYSGPGSGSLVAAASAWSSLAAELNAAALSYDKVVTALASEEWLGS 60 Query 61 ASAAMAEAVAPYVAWMSAAAAQAEQAATQARAAAAAFEAAFAATVPPPLIAANRASLMQL 120 ASA+MA AVAPYV WMS AAQAE+AA+QARAAAAA+EAA AA+VPPPLIAANR + QL Sbjct 61 ASASMASAVAPYVGWMSTTAAQAEEAASQARAAAAAYEAALAASVPPPLIAANRMQVSQL 120 Query 121 ISTNVFGQNTSAIAAAEAQYGEMWAQDSAAMYAYAGSSASASAVTPFSTPPQIANPTAQG 180 +TNV GQNT IA EAQYGE WAQD+AAMY+YAG SASAS VTPF PQ+ NP+ Q Sbjct 121 QATNVLGQNTPLIAQLEAQYGEYWAQDAAAMYSYAGQSASASKVTPFQKAPQVTNPSGQA 180 Query 181 TQAAAVATAAGTAQSTLTEMITGLPNALQSLTSP--------------LLQSSNGPLSWL 226 Q+AAV+TA + ST T ALQSL P +S PLS + Sbjct 181 AQSAAVSTATANSTSTNTT------KALQSLAQPASSSTTATKAATTAASTTSTDPLSEI 234 Query 227 WQILFGTPNFPTSISALLTDLQPYASFFYNTEGLPYFSIGMGNNFIQSAKTLGLIGSAAP 286 W +L G + PT++ L+ P+A FYNTEGLPYFS GM N F Q AK++G IG AAP Sbjct 235 WFLLTGQTSLPTNLGTLVNGYSPFAGLFYNTEGLPYFSTGMANTFTQIAKSVGAIGGAAP 294 Query 287 AAVAAAGDAAKGLPGLGGMLGGGPVAAGLGNAASV-GKLSVPPVWSGPLPGSVTPGAAPL 345 AA A LGG A LG A S+ GKLSVP WSG P + G A + Sbjct 295 AAAKALPGLGGLGGMLGGGAAAAHPVAALGGAGSIGGKLSVPVAWSG-APATPALGHA-I 352 Query 346 PVSTVSAAPEAA--PGSLL---GGLPLAGAGGAGAGPRYGFRPTVMARPPFAG 393 PVS++SAAPEAA PG+LL G AGP+YGFRPTVMARPPFAG Sbjct 353 PVSSISAAPEAAGGPGNLLGGMPLAGAGAGGHGAAGPKYGFRPTVMARPPFAG 405 >gi|158667958|gb|ABW76443.1| PPE family protein [Mycobacterium avium subsp. paratuberculosis] Length=406 Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 231/413 (56%), Positives = 272/413 (66%), Gaps = 28/413 (6%) Query 1 MDFGALPPEVNSVRMYAGPGSAPMVAAASAWNGLAAELSSAATGYETVITQLSSEGWLGP 60 +D+GA PPE NS R+Y+GPGS +VAAASAW+ LAAEL++AA Y+ V+T L+SE WLG Sbjct 2 LDYGAFPPEFNSARIYSGPGSGSLVAAASAWSSLAAELNAAALSYDKVVTALASEEWLGS 61 Query 61 ASAAMAEAVAPYVAWMSAAAAQAEQAATQARAAAAAFEAAFAATVPPPLIAANRASLMQL 120 ASA+MA AVAPYV WMS AAQAE+AA+QARAAAAA+EAA AA+VPPPLIAANR + QL Sbjct 62 ASASMASAVAPYVGWMSTTAAQAEEAASQARAAAAAYEAALAASVPPPLIAANRMQVSQL 121 Query 121 ISTNVFGQNTSAIAAAEAQYGEMWAQDSAAMYAYAGSSASASAVTPFSTPPQIANPTAQG 180 +TNV GQNT IA EAQYGE WAQD+AAMY+YAG SASAS VTPF PQ+ NP+ Q Sbjct 122 QATNVLGQNTPLIAQLEAQYGEYWAQDAAAMYSYAGQSASASKVTPFQKAPQVTNPSGQA 181 Query 181 TQAAAVATAAGTAQSTLTEMITGLPNALQSLTSP--------------LLQSSNGPLSWL 226 Q+AAV+TA + ST T ALQSL P +S PLS + Sbjct 182 AQSAAVSTATANSTSTNTT------KALQSLAQPASSSTTATKAATTAASTTSTDPLSEI 235 Query 227 WQILFGTPNFPTSISALLTDLQPYASFFYNTEGLPYFSIGMGNNFIQSAKTLGLIGSAAP 286 W +L G PTS+ + + P+AS FYNTEGLPYFS GM N F Q AK++G IG AAP Sbjct 236 WFLLTGQTTLPTSLGSAVNGYSPFASLFYNTEGLPYFSTGMANTFTQIAKSVGAIGGAAP 295 Query 287 AAVAAAGDAAKGLPGLGGMLGGGPVAAGLGNAASV-GKLSVPPVWSGPLPGSVTPGAAPL 345 AA A LGG A LG A S+ GKLSVP WSG P + G A + Sbjct 296 AAAKALPGLGGLGGMLGGGAAAAHPVAALGGAGSIGGKLSVPVAWSG-APAAPALGHA-I 353 Query 346 PVSTVSAAPEAA--PGSLL---GGLPLAGAGGAGAGPRYGFRPTVMARPPFAG 393 PVS++SAAPEAA PG+LL G AGP+YGFRPTVMARPPFAG Sbjct 354 PVSSISAAPEAAGGPGNLLGGMPLAGAGAGGHGAAGPKYGFRPTVMARPPFAG 406 >gi|118464959|ref|YP_882112.1| PPE family protein [Mycobacterium avium 104] gi|118166246|gb|ABK67143.1| ppe family protein [Mycobacterium avium 104] Length=407 Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 230/413 (56%), Positives = 271/413 (66%), Gaps = 28/413 (6%) Query 1 MDFGALPPEVNSVRMYAGPGSAPMVAAASAWNGLAAELSSAATGYETVITQLSSEGWLGP 60 +D+G PPE NS R+Y+GPGS +VAAASAW+ LAAEL++AA Y+ V+T L+SE WLG Sbjct 3 LDYGTFPPEFNSARIYSGPGSGSLVAAASAWSSLAAELNAAALSYDKVVTALASEEWLGS 62 Query 61 ASAAMAEAVAPYVAWMSAAAAQAEQAATQARAAAAAFEAAFAATVPPPLIAANRASLMQL 120 ASA+MA AVAPYV WMS AAQAE+AA+QARAAAAA+EAA AA+VPPPLIAANR + QL Sbjct 63 ASASMASAVAPYVGWMSTTAAQAEEAASQARAAAAAYEAALAASVPPPLIAANRMQVSQL 122 Query 121 ISTNVFGQNTSAIAAAEAQYGEMWAQDSAAMYAYAGSSASASAVTPFSTPPQIANPTAQG 180 +TNV GQNT IA EAQYGE WAQD+AAMY+YAG SASAS VTPF PQ+ NP+ Q Sbjct 123 QATNVLGQNTPLIAQLEAQYGEYWAQDAAAMYSYAGQSASASKVTPFQKAPQVTNPSGQA 182 Query 181 TQAAAVATAAGTAQSTLTEMITGLPNALQSLTSP--------------LLQSSNGPLSWL 226 Q+AAV+TA + ST T ALQSL P +S PLS + Sbjct 183 AQSAAVSTATANSTSTNTT------KALQSLAQPASSSTTATKAATTAASTTSTDPLSEI 236 Query 227 WQILFGTPNFPTSISALLTDLQPYASFFYNTEGLPYFSIGMGNNFIQSAKTLGLIGSAAP 286 W +L G PTS+ + + P+AS FYNTEGLPYFS GM N F Q AK++G IG AAP Sbjct 237 WFLLTGQTTLPTSLGSAVNGYSPFASLFYNTEGLPYFSTGMANTFTQIAKSVGAIGGAAP 296 Query 287 AAVAAAGDAAKGLPGLGGMLGGGPVAAGLGNAASV-GKLSVPPVWSGPLPGSVTPGAAPL 345 AA A LGG A LG A S+ GKLSVP WSG P + G A + Sbjct 297 AAAKALPGLGGLGGMLGGGAAAAHPVAALGGAGSIGGKLSVPVAWSG-APATPALGHA-I 354 Query 346 PVSTVSAAPEAA--PGSLL---GGLPLAGAGGAGAGPRYGFRPTVMARPPFAG 393 PVS++SAAPEAA PG+LL G AGP+YGFRPTVMARPPFAG Sbjct 355 PVSSISAAPEAAGGPGNLLGGMPLAGAGAGGHGAAGPKYGFRPTVMARPPFAG 407 >gi|212596061|gb|ACJ35548.1| PPE23 [Mycobacterium avium subsp. avium] Length=406 Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 230/413 (56%), Positives = 271/413 (66%), Gaps = 28/413 (6%) Query 1 MDFGALPPEVNSVRMYAGPGSAPMVAAASAWNGLAAELSSAATGYETVITQLSSEGWLGP 60 +D+G PPE NS R+Y+GPGS +VAAASAW+ LAAEL++AA Y+ V+T L+SE WLG Sbjct 2 LDYGTFPPEFNSARIYSGPGSGSLVAAASAWSSLAAELNAAALSYDKVVTALASEEWLGS 61 Query 61 ASAAMAEAVAPYVAWMSAAAAQAEQAATQARAAAAAFEAAFAATVPPPLIAANRASLMQL 120 ASA+MA AVAPYV WMS AAQAE+AA+QARAAAAA+EAA AA+VPPPLIAANR + QL Sbjct 62 ASASMASAVAPYVGWMSTTAAQAEEAASQARAAAAAYEAALAASVPPPLIAANRMQVSQL 121 Query 121 ISTNVFGQNTSAIAAAEAQYGEMWAQDSAAMYAYAGSSASASAVTPFSTPPQIANPTAQG 180 +TNV GQNT IA EAQYGE WAQD+AAMY+YAG SASAS VTPF PQ+ NP+ Q Sbjct 122 QATNVLGQNTPLIAQLEAQYGEYWAQDAAAMYSYAGQSASASKVTPFQKAPQVTNPSGQA 181 Query 181 TQAAAVATAAGTAQSTLTEMITGLPNALQSLTSP--------------LLQSSNGPLSWL 226 Q+AAV+TA + ST T ALQSL P +S PLS + Sbjct 182 AQSAAVSTATANSTSTNTT------KALQSLAQPASSSTTATKAATTAASTTSTDPLSEI 235 Query 227 WQILFGTPNFPTSISALLTDLQPYASFFYNTEGLPYFSIGMGNNFIQSAKTLGLIGSAAP 286 W +L G PTS+ + + P+AS FYNTEGLPYFS GM N F Q AK++G IG AAP Sbjct 236 WFLLTGQTTLPTSLGSAVNGYSPFASLFYNTEGLPYFSTGMANTFTQIAKSVGAIGGAAP 295 Query 287 AAVAAAGDAAKGLPGLGGMLGGGPVAAGLGNAASV-GKLSVPPVWSGPLPGSVTPGAAPL 345 AA A LGG A LG A S+ GKLSVP WSG P + G A + Sbjct 296 AAAKALPGLGGLGGMLGGGAAAAHPVAALGGAGSIGGKLSVPVAWSG-APATPALGHA-I 353 Query 346 PVSTVSAAPEAA--PGSLL---GGLPLAGAGGAGAGPRYGFRPTVMARPPFAG 393 PVS++SAAPEAA PG+LL G AGP+YGFRPTVMARPPFAG Sbjct 354 PVSSISAAPEAAGGPGNLLGGMPLAGAGAGGHGAAGPKYGFRPTVMARPPFAG 406 >gi|158667962|gb|ABW76445.1| PPE family protein [Mycobacterium avium subsp. paratuberculosis] gi|336457653|gb|EGO36657.1| PPE-repeat containing protein [Mycobacterium avium subsp. paratuberculosis S397] Length=406 Score = 249 bits (635), Expect = 7e-64, Method: Compositional matrix adjust. Identities = 230/413 (56%), Positives = 272/413 (66%), Gaps = 28/413 (6%) Query 1 MDFGALPPEVNSVRMYAGPGSAPMVAAASAWNGLAAELSSAATGYETVITQLSSEGWLGP 60 +D+GA PPE NS R+Y+GPGS +VAAASAW+ LAAEL++AA Y+ V+T L+SE WLG Sbjct 2 LDYGAFPPEFNSARIYSGPGSGSLVAAASAWSSLAAELNAAALSYDKVVTALASEEWLGS 61 Query 61 ASAAMAEAVAPYVAWMSAAAAQAEQAATQARAAAAAFEAAFAATVPPPLIAANRASLMQL 120 ASA+MA AVAPYV WMS AAQAE+AA+QARAAAAA+EAA AA+VPPPLIAAN+ + QL Sbjct 62 ASASMASAVAPYVGWMSTTAAQAEEAASQARAAAAAYEAALAASVPPPLIAANQMQVSQL 121 Query 121 ISTNVFGQNTSAIAAAEAQYGEMWAQDSAAMYAYAGSSASASAVTPFSTPPQIANPTAQG 180 +TNV GQNT IA EAQYGE WAQD+AAMY+YAG SASAS VTPF PQ+ NP+ Q Sbjct 122 QATNVLGQNTPLIAQLEAQYGEYWAQDAAAMYSYAGQSASASKVTPFQKAPQVTNPSGQA 181 Query 181 TQAAAVATAAGTAQSTLTEMITGLPNALQSLTSP--------------LLQSSNGPLSWL 226 Q+AAV+TA + ST T ALQSL P +S PLS + Sbjct 182 AQSAAVSTATANSTSTNTT------KALQSLAQPASSSTTATKAATTAASTTSTDPLSEI 235 Query 227 WQILFGTPNFPTSISALLTDLQPYASFFYNTEGLPYFSIGMGNNFIQSAKTLGLIGSAAP 286 W +L G PTS+ + + P+AS FYNTEGLPYFS GM N F Q AK++G IG AAP Sbjct 236 WFLLTGQTTLPTSLGSAVNGYSPFASLFYNTEGLPYFSTGMANTFTQIAKSVGAIGGAAP 295 Query 287 AAVAAAGDAAKGLPGLGGMLGGGPVAAGLGNAASV-GKLSVPPVWSGPLPGSVTPGAAPL 345 AA A LGG A LG A S+ GKLSVP WSG P + G A + Sbjct 296 AAAKALPGLGGLGGMLGGGAAAAHPVAALGGAGSIGGKLSVPVAWSG-APAAPALGHA-I 353 Query 346 PVSTVSAAPEAA--PGSLL---GGLPLAGAGGAGAGPRYGFRPTVMARPPFAG 393 PVS++SAAPEAA PG+LL G AGP+YGFRPTVMARPPFAG Sbjct 354 PVSSISAAPEAAGGPGNLLGGMPLAGAGAGGHGAAGPKYGFRPTVMARPPFAG 406 >gi|342861307|ref|ZP_08717955.1| PPE family protein [Mycobacterium colombiense CECT 3035] gi|342131207|gb|EGT84488.1| PPE family protein [Mycobacterium colombiense CECT 3035] Length=417 Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 199/420 (48%), Positives = 253/420 (61%), Gaps = 30/420 (7%) Query 1 MDFGALPPEVNSVRMYAGPGSAPMVAAASAWNGLAAELSSAATGYETVITQLSSEGWLGP 60 MDFGALPPE+NS RMYAGPGS PM+AAA+AW+GL AELSSAA+GY +VI++L+ W+GP Sbjct 1 MDFGALPPEINSGRMYAGPGSGPMMAAAAAWDGLGAELSSAASGYTSVISELTHAPWVGP 60 Query 61 ASAAMAEAVAPYVAWMSAAAAQAEQAATQARAAAAAFEAAFAATVPPPLIAANRASLMQL 120 AS++M AV PYV+W+S AAQAE+ A QARAAAAAFEAAFA TVPPP+IAANR L L Sbjct 61 ASSSMLSAVTPYVSWLSVLAAQAEETAGQARAAAAAFEAAFAMTVPPPVIAANRVLLANL 120 Query 121 ISTNVFGQNTSAIAAAEAQYGEMWAQDSAAMYAYAGSSASASAVTPFSTPPQIANPTAQG 180 ++TN GQNT AIAA EAQY EMWAQD+AAMY YAGSSA AS + P ++PP P A Sbjct 121 VATNFLGQNTPAIAATEAQYMEMWAQDAAAMYGYAGSSAVASELPPLTSPPNTTTPEADS 180 Query 181 TQAAAVATA----AGTAQSTLTEMIT------GLPNALQSLTSPLLQSSNGPLSWLWQIL 230 QAAAVA A AG T +++ T G A+ ++ + GP +WL ++ Sbjct 181 DQAAAVAKAVAEPAGNTAQTTSQLATPQALSAGATQAVTQASTTTTATQPGPFTWLQNLI 240 Query 231 --FGTPNFPT---SISALLTDLQPYASFFYNTEGLPYFSIGMGNNFIQSAKTLGLIGSAA 285 F T PT + + L T + Y + T GL YFS G+ + + A+ L Sbjct 241 NGFLTSGLPTPTNNYAGLNTGM--YGTLLKQTTGLAYFSTGITSFWSSIAQQLTFGPGGT 298 Query 286 PAAVAAA-----GDAAKGLPGLGGMLGGGPVAAGLGNAASVGKLSVPPVWSGPLPGSVTP 340 A A A+ GL LGG+ G V+AG+G A VG LSVP W+ L SV+P Sbjct 299 TAGAGGAWFPTPQFASLGLGNLGGVGHVGAVSAGVGQAGRVGMLSVPQHWA-TLTSSVSP 357 Query 341 GA---APLPVSTVSAAPEAAPGSLLGGLPLAGAGGAGAG----PRYGFRPTVMARPPFAG 393 A P+ + + LL G+P+ G GA +YGFR +V+ RPP AG Sbjct 358 AALSEEATPIQAAAGGANSPANGLLRGMPVGSIGRRGAAAGYVNKYGFRYSVLTRPPSAG 417 >gi|41407604|ref|NP_960440.1| hypothetical protein MAP1506 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395957|gb|AAS03823.1| hypothetical protein MAP_1506 [Mycobacterium avium subsp. paratuberculosis K-10] Length=407 Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 228/414 (56%), Positives = 271/414 (66%), Gaps = 29/414 (7%) Query 1 MDFGALPPEVNSVRMYAGPGSAPMVAAASAWNGLAAELSSAATGYETVITQLSSEGWLGP 60 +D+GA PPE NS R+Y+GPGS +VAAASAW+ LAAEL++AA Y+ V+T L+SE WLG Sbjct 2 LDYGAFPPEFNSARIYSGPGSGSLVAAASAWSSLAAELNAAALSYDKVVTALASEEWLGS 61 Query 61 ASAAMAEAVAPYVAWMSAAAAQAEQAATQARAAAAAFEAAFAATVPPPLIAANRASLMQL 120 ASA+MA AVAPYV WMS AAQAE+AA+QARAAAAAFEAA AA+VPPP+IAANR + QL Sbjct 62 ASASMASAVAPYVGWMSTTAAQAEEAASQARAAAAAFEAALAASVPPPVIAANRMQVSQL 121 Query 121 ISTNVFGQNTSAIAAAEAQYGEMWAQDSAAMYAYAGSSASASAVTPFSTPPQIANPTAQG 180 +TNV GQNT IA EAQYGE WAQD+AAMY+YAG SASAS VTPF PQ+ NP+ Q Sbjct 122 QATNVLGQNTPLIAQFEAQYGEYWAQDAAAMYSYAGQSASASKVTPFQKAPQVTNPSGQV 181 Query 181 TQAAAVATAAGTAQSTLTEMITGLPNALQSLTSP--------------LLQSSNGPLSWL 226 Q+AAV+TA + ST T ALQSL P +S PLS + Sbjct 182 AQSAAVSTATANSTSTNTT------KALQSLAQPASSSTTATKAATTAASTTSTDPLSEI 235 Query 227 WQILFGTPNFPTSISALLTDLQPYASFFYNTEGLPYFSIGMGNNFIQSAKTL-GLIGSAA 285 W +L G PTS+ + + P+AS FYNTEGLPYFS GM N F Q AK++ + G+A Sbjct 236 WFLLTGQTTLPTSLGSAVNGYSPFASLFYNTEGLPYFSTGMANTFTQIAKSVGAIGGAAP 295 Query 286 PAAVAAAGDAAKGLPGLGGMLGGGPVAAGLGNAASV-GKLSVPPVWSGPLPGSVTPGAAP 344 AA A G G GG A LG A S+ GKLSVP WSG P + G A Sbjct 296 AAAKALPGLGGLGGMLGGGGAAAAHPVAALGGAGSIGGKLSVPVAWSG-APAAPALGHA- 353 Query 345 LPVSTVSAAPEAA--PGSLL---GGLPLAGAGGAGAGPRYGFRPTVMARPPFAG 393 +PVS++SAAPEAA PG+LL G AGP+YGFRPTVMARPPFAG Sbjct 354 IPVSSISAAPEAAGGPGNLLGGMPLAGAGAGGHGAAGPKYGFRPTVMARPPFAG 407 >gi|240172861|ref|ZP_04751520.1| PPE family protein, PPE31 [Mycobacterium kansasii ATCC 12478] Length=401 Score = 239 bits (610), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 195/406 (49%), Positives = 243/406 (60%), Gaps = 22/406 (5%) Query 1 MDFGALPPEVNSVRMYAGPGSAPMVAAASAWNGLAAELSSAATGYETVITQLSSEGWLGP 60 +DF LPPE+NS RMY+GPGS PM+AAASAW LAAEL + A Y +V+ L+ E W GP Sbjct 5 LDFAMLPPEINSARMYSGPGSGPMLAAASAWKSLAAELRATALSYHSVLAALTGEEWYGP 64 Query 61 ASAAMAEAVAPYVAWMSAAAAQAEQAATQARAAAAAFEAAFAATVPPPLIAANRASLMQL 120 ASA+MA A APYVAW++ A QAEQ A QA AAA A+EAAF ATVPPP+IAANRA LM L Sbjct 65 ASASMAAAAAPYVAWLNTTAVQAEQTAVQAEAAAGAYEAAFGATVPPPVIAANRAQLMAL 124 Query 121 ISTNVFGQNTSAIAAAEAQYGEMWAQDSAAMYAYAGSSASASAVTPFSTPPQIANPTAQG 180 I+TN+ GQNT AIAA EAQY EMWAQD+ AMY YAGSSA+A+ ++PF P Q NP+ Sbjct 125 IATNILGQNTPAIAATEAQYTEMWAQDAMAMYGYAGSSAAATQLSPFVEPQQATNPSGLA 184 Query 181 TQAAAV----ATAAGTAQSTLTEMITGLPNALQSLTSPLLQSSNGPLSWLWQILFGTPNF 236 QAAAV A +AG STL+ +I+ +P+ALQ L+ P +S L +W +L G+ Sbjct 185 AQAAAVTEASANSAGNQSSTLSGLISMVPSALQGLSGP---NSTSWLQVIWDLLTGS--G 239 Query 237 PTSISALLTDLQPYASFFYNTEGLPYFSIG------MGNNFIQSAKTLGLIGSAAPAAVA 290 P L P A+ + F G M + + ++A AA Sbjct 240 PAWWQTLWNVWGPNANVWNTITSTGLFVPGSTFAPFMASVLAGAVAADAAQDASAAAAGV 299 Query 291 AAGDAAKGLPGLGGMLGGGPVAAGLGNAASVGKLSVPPVWSGPLPGSVTPGAAPLPVSTV 350 +G AA L G + G V+AGLGNA VGKLSVPP W+ P G+A V Sbjct 300 GSGLAAGPLASTGSV--GSAVSAGLGNAGIVGKLSVPPAWTAAAPLHSPLGSALGGTPMV 357 Query 351 SAAPEAAPGSLLGGLPLAGAGGAGAG---PRYGFRPTVMARPPFAG 393 + P A G + G+P G G P+YGFRPT +ARPP AG Sbjct 358 APPPAVAAG--MPGMPFGNMAGQPFGRAVPQYGFRPTFVARPPAAG 401 >gi|254821012|ref|ZP_05226013.1| PPE family protein, PPE31 [Mycobacterium intracellulare ATCC 13950] gi|212596828|gb|ACJ35609.1| PPE48 [Mycobacterium intracellulare ATCC 13950] Length=389 Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 207/406 (51%), Positives = 252/406 (63%), Gaps = 32/406 (7%) Query 1 MDFGALPPEVNSVRMYAGPGSAPMVAAASAWNGLAAELSSAATGYETVITQLSSEGWLGP 60 +DF LPPE+NS RMYAGPGS PM+ AASAWNGLAAEL SAA Y + ++ L+SE W GP Sbjct 3 VDFATLPPEINSARMYAGPGSGPMLVAASAWNGLAAELRSAALSYGSALSSLTSEEWHGP 62 Query 61 ASAAMAEAVAPYVAWMSAAAAQAEQAATQARAAAAAFEAAFAATVPPPLIAANRASLMQL 120 ASAAM A PYVAWMS A QAEQAATQA AAAAA+EAAFAATVPPP IAANRA L L Sbjct 63 ASAAMVAAATPYVAWMSTTATQAEQAATQAEAAAAAYEAAFAATVPPPAIAANRAQLATL 122 Query 121 ISTNVFGQNTSAIAAAEAQYGEMWAQDSAAMYAYAGSSASASAVTPFSTPPQIANPT--- 177 I+TNV GQNT AIAA EAQYGEMWAQD+A MY YAGSSA+A+ + F+ P Q + Sbjct 123 IATNVLGQNTPAIAATEAQYGEMWAQDAATMYGYAGSSAAATRLPMFTDPTQTTSQDGQA 182 Query 178 -AQGTQAAAVATAAGTAQSTLTEMITGLPNALQSLTSPLLQSSNGPLSWLWQILFGTPNF 236 A A T+AG Q+T++++ T +PNALQ+L+SP +SS G S L IL NF Sbjct 183 RQAAAVAQATGTSAGNQQATVSQLNTAVPNALQTLSSP-TESSTGSTSGLSSILDPNSNF 241 Query 237 PTSISAL--LTDLQPYASFFYNTEGLPYFSIGMGNNFIQSAKTLGLIGSAAPAAVAAAGD 294 +I++ L Q + +T IG S L + S AP A G Sbjct 242 WNTITSTGALDPAQVVQTVTSSTL------IG------ASTSALNDLASGAPVAT-GIGT 288 Query 295 AAKGLPGLGGM-LGGGPVAAGLGNAASVGKLSVPPVWSGPLPGSVTPGAAPLPVS---TV 350 +A+ L GL G+ G V+AGLG A+ VG LSVPP W+ P P A+PLP + T Sbjct 289 SAQSLSGLAGVGNAGASVSAGLGRASLVGPLSVPPSWAPP-----APVASPLPSALGGTP 343 Query 351 SAAPEAAPGSLLGGLPLAGAGGAGAG---PRYGFRPTVMARPPFAG 393 AP A + + G+P + G G G P+YGFRP + RPP AG Sbjct 344 MVAPPPAMAAGMPGMPFSPMGNHGLGRAVPQYGFRPNFVVRPPAAG 389 >gi|289446957|ref|ZP_06436701.1| PPE family protein [Mycobacterium tuberculosis CPHL_A] gi|289419915|gb|EFD17116.1| PPE family protein [Mycobacterium tuberculosis CPHL_A] Length=396 Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 178/416 (43%), Positives = 235/416 (57%), Gaps = 44/416 (10%) Query 1 MDFGALPPEVNSVRMYAGPGSAPMVAAASAWNGLAAELSSAATGYETVITQLSSEGWLGP 60 +DFGALPPE+NS RMYAGPGSA +VAAA W+ +A++L SAA+ +++V+ L++ W+G Sbjct 2 VDFGALPPEINSARMYAGPGSASLVAAAKMWDSVASDLFSAASAFQSVVWGLTTGSWIGS 61 Query 61 ASAAMAEAVAPYVAWMSAAAAQAEQAATQARAAAAAFEAAFAATVPPPLIAANRASLMQL 120 ++ MA A +PYVAWMS A QAE A Q R AAAA+E A+ TVPPP+IA NRA LM L Sbjct 62 SAGLMAAAASPYVAWMSVTAGQAELTAAQVRVAAAAYETAYRLTVPPPVIAENRAELMIL 121 Query 121 ISTNVFGQNTSAIAAAEAQYGEMWAQDSAAMYAY-AGSSASASAVTPFSTPPQIANPTAQ 179 I+TN+ GQNT AIA EA+YGEMWAQD+AAM+ Y A ++ + A+ PF P I NP Sbjct 122 IATNLLGQNTPAIAVNEAEYGEMWAQDAAAMFGYAATAATATEALLPFEDAPLITNPGGL 181 Query 180 GTQAAAVATAAGTAQSTLTEMITGLPNALQSLTSPLLQSSNGPLSWLWQILFGTPNFPTS 239 QA AV A TA + +++ +P ALQ L P +W Sbjct 182 LEQAVAVEEAIDTAAA--NQLMNNVPQALQQLAQPTKS--------IWPF--------DQ 223 Query 240 ISALLTDLQPYASFFYNTEGLPYFSIGMGNNFIQSAKTL-GLIGSAAPAAVAAAGDAAKG 298 +S L + P+ S N + + M N+ + A TL ++ APAA A AA+ Sbjct 224 LSELWKAISPHLSPLSNIVSMLNNHVSMTNSGVSMASTLHSMLKGLAPAAAQAVETAAQN 283 Query 299 LPGLGGMLGGGP--------------VAAGLGNAASVGKLSVPPVWSGPLPGSVTPGAAP 344 G+ M G VAA LG AASVG LSVPP W+ +VTP A Sbjct 284 --GVQAMSSLGSQLGSSLGSSGLGAGVAANLGRAASVGSLSVPPAWAAA-NQAVTPAARA 340 Query 345 LPVSTVSAAPEAAPGSLLGGLPL-------AGAGGAGAGPRYGFRPTVMARPPFAG 393 LP++++++A + APG +LGGLPL G GG R R VM R P AG Sbjct 341 LPLTSLTSAAQTAPGHMLGGLPLGQLTNSGGGFGGVSNALRMPPRAYVMPRVPAAG 396 >gi|183981478|ref|YP_001849769.1| PPE family protein [Mycobacterium marinum M] gi|183174804|gb|ACC39914.1| PPE family protein [Mycobacterium marinum M] Length=427 Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 181/382 (48%), Positives = 237/382 (63%), Gaps = 42/382 (10%) Query 1 MDFGALPPEVNSVRMYAGPGSAPMVAAASAWNGLAAELSSAATGYETVITQLSSEGWLGP 60 MDFGALPPE+NS RMY GPGS PM+AAA W+ LAAEL + A GY + + L+ W GP Sbjct 1 MDFGALPPEINSGRMYVGPGSGPMLAAAVVWDELAAELYATAAGYRSTLDGLTGGSWRGP 60 Query 61 ASAAMAEAVAPYVAWMSAAAAQAEQAATQARAAAAAFEAAFAATVPPPLIAANRASLMQL 120 ASA+MA A APYVAWM+A AAQAE A +QA+ AA+A+E AFAATVPPP+IAANRA LM L Sbjct 61 ASASMAAAAAPYVAWMTATAAQAELAGSQAKVAASAYETAFAATVPPPVIAANRALLMGL 120 Query 121 ISTNVFGQNTSAIAAAEAQYGEMWAQDSAAMYAYAGSSASASAVTPFSTPPQIANPTAQG 180 + TN+FGQNT AIAA EA Y EMWAQD+AAMYAYAGSSA+A+ VTPF+ PPQI +P+ Sbjct 121 VFTNIFGQNTPAIAATEAHYAEMWAQDAAAMYAYAGSSATATQVTPFTEPPQITSPSGAV 180 Query 181 TQAAAVATAAGTAQST-----LTEMITGLPNALQSLTSPLLQSSNGPLSWLWQILFGTPN 235 +QAAAV AA + S+ L+ +I +PNALQ + +S P + + G P+ Sbjct 181 SQAAAVTEAATASASSDITAQLSPLIAVVPNALQGMA-----TSGNPAA----AIAGLPD 231 Query 236 FPTSISALLTDLQPYASFF------YNTEGL------PYFSIGMGNNFIQS--------A 275 + ++TDLQ + + + +GL P+ + G F Q+ + Sbjct 232 VALP-AGIITDLQNFTTILDTLDGPFTIQGLTGVPGGPFLAFGQVYAFSQNMVGAQAFFS 290 Query 276 KTLGLIGSAAPAAVAAAGDAAKGLPGLGGMLGGGPVAAG-LGNAASVGKLSVPPVWSGPL 334 +IG AP AG+A G G+ G G A+G +G+AA VG +SVP W+ Sbjct 291 PAEPVIGGLAP----LAGEANLGAAGVVGGPSVGGQASGAMGHAALVGNMSVPQGWTQEA 346 Query 335 PGSVTPGAAPLPVSTVSAAPEA 356 P ++ + LP S V+AAP A Sbjct 347 P-AIRVFVSELPTS-VTAAPAA 366 >gi|183982688|ref|YP_001850979.1| PPE family protein, PPE31_1 [Mycobacterium marinum M] gi|183176014|gb|ACC41124.1| PPE family protein, PPE31_1 [Mycobacterium marinum M] Length=422 Score = 236 bits (602), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 195/427 (46%), Positives = 249/427 (59%), Gaps = 39/427 (9%) Query 1 MDFGALPPEVNSVRMYAGPGSAPMVAAASAWNGLAAELSSAATGYETVITQLSSEGWLGP 60 MDF ALPPE+NS+RMY+GPGSAPM+AA +AW+GLAAEL S A YETVI L+ +GWLGP Sbjct 1 MDFAALPPEINSIRMYSGPGSAPMLAAVTAWDGLAAELRSTAAAYETVIAVLTGDGWLGP 60 Query 61 ASAAMAEAVAPYVAWMSAAAAQAEQAATQARAAAAAFEAAFAATVPPPLIAANRASLMQL 120 AS +M AV PY+AWM+ QAEQ A QA AAA AFEAAFA TVPP +AANR L L Sbjct 61 ASESMEAAVFPYLAWMNITGMQAEQTARQAAAAAGAFEAAFAMTVPPAQVAANRTQLQTL 120 Query 121 ISTNVFGQNTSAIAAAEAQYGEMWAQDSAAMYAYAGSSASASAVTPFSTPPQIANPTAQG 180 ++TN+ GQNT AIAA EA YGEMWAQD+AAMY YA SA+AS +T F+ P Q +P+ Sbjct 121 VATNLLGQNTPAIAATEAAYGEMWAQDAAAMYGYAVGSAAASTLTQFTQPAQTTDPSGLA 180 Query 181 TQAAAVATAAGT-----AQSTLTEMITGLPNALQSLTSPLLQS------SNGPLSWLWQI 229 +Q+AAV A G+ Q+ L ++++ +P +LQ L SP S +G L+ L Sbjct 181 SQSAAVTQAVGSTVGNLTQTELPQLMSAVPASLQGLASPAAASPIDAIPGSGLLAALLNF 240 Query 230 LFGTPNFPTSISALLTDLQPYASFFYNTEGL--PYFSIGMGNNFIQSAKTLGLIGSAA-- 285 L G P + + + + S Y + + P M + +A LG SAA Sbjct 241 LDGNDGNPYGVFLNSSLVNGFVSAGYVSPAVVGPAIWAAMAD---INAVALGAQESAAVP 297 Query 286 --------PAAVAAAGDAA-KGLPGLG----GMLGGGPVAAGLGNAASVGKLSVPPVWSG 332 P+ + AA A+ + LP LG LG G ++AG+ A VG++SVP W Sbjct 298 PMGSGEGNPSWIPAASPASPESLPVLGEETAATLGTGGISAGMNQAELVGRMSVPQSWGV 357 Query 333 PLPGSVTPGAAPLPVSTVSAA--PEAAPGSLLGGLPLAGAG----GAGAGPRYGFRPTVM 386 + GAA S A PEAA G + G+P AG G PRYGFRPT+M Sbjct 358 ATAVANHAGAAAPGGGWTSTAVVPEAAVG--MPGIPGMPAGIYGHNLGNAPRYGFRPTIM 415 Query 387 ARPPFAG 393 RPP AG Sbjct 416 GRPPAAG 422 >gi|306784092|ref|ZP_07422414.1| PPE family protein [Mycobacterium tuberculosis SUMu003] gi|306788459|ref|ZP_07426781.1| PPE family protein [Mycobacterium tuberculosis SUMu004] gi|306792785|ref|ZP_07431087.1| PPE family protein [Mycobacterium tuberculosis SUMu005] gi|306797185|ref|ZP_07435487.1| PPE family protein [Mycobacterium tuberculosis SUMu006] gi|308331160|gb|EFP20011.1| PPE family protein [Mycobacterium tuberculosis SUMu003] gi|308334942|gb|EFP23793.1| PPE family protein [Mycobacterium tuberculosis SUMu004] gi|308338747|gb|EFP27598.1| PPE family protein [Mycobacterium tuberculosis SUMu005] gi|308342446|gb|EFP31297.1| PPE family protein [Mycobacterium tuberculosis SUMu006] Length=396 Score = 236 bits (601), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 175/414 (43%), Positives = 231/414 (56%), Gaps = 40/414 (9%) Query 1 MDFGALPPEVNSVRMYAGPGSAPMVAAASAWNGLAAELSSAATGYETVITQLSSEGWLGP 60 +DFGALPPE+NS RMYAGPGSA +VAAA W+ +A++L SAA+ +++V+ L++ W+G Sbjct 2 VDFGALPPEINSARMYAGPGSASLVAAAKMWDSVASDLFSAASAFQSVVWGLTTGSWIGS 61 Query 61 ASAAMAEAVAPYVAWMSAAAAQAEQAATQARAAAAAFEAAFAATVPPPLIAANRASLMQL 120 ++ M A +PYVAWMS A QAE A Q R AAAA+E A+ TVPPP+IA NRA LM L Sbjct 62 SAGLMVAAASPYVAWMSVTAGQAELTAAQVRVAAAAYETAYGLTVPPPVIAENRAELMIL 121 Query 121 ISTNVFGQNTSAIAAAEAQYGEMWAQDSAAMYAY-AGSSASASAVTPFSTPPQIANPTAQ 179 I+TN+ GQNT AIA EA+YGEMWAQD+AAM+ Y A ++ + A+ PF P I NP Sbjct 122 IATNLLGQNTPAIAVNEAEYGEMWAQDAAAMFGYAATAATATEALLPFEDAPLITNPGGL 181 Query 180 GTQAAAVATAAGTAQSTLTEMITGLPNALQSLTSPLLQSSNGPLSWLWQILFGTPNFPTS 239 QA AV A TA + +++ +P ALQ L P +W Sbjct 182 LEQAVAVEEAIDTAAA--NQLMNNVPQALQQLAQPTKS--------IWPF--------DQ 223 Query 240 ISALLTDLQPYASFFYNTEGLPYFSIGMGNNFIQSAKTLG--LIGSAAPAAVAAAGDAAK 297 +S L + P+ S N + + M N+ + A TL L G A AA A A Sbjct 224 LSELWKAISPHLSPLSNIVSMLNNHVSMTNSGVSMASTLHSMLKGFAPAAAQAVETAAQN 283 Query 298 GLPGLGGMLGGGP-----------VAAGLGNAASVGKLSVPPVWSGPLPGSVTPGAAPLP 346 G+ + + VAA LG AASVG LSVPP W+ +VTP A LP Sbjct 284 GVQAMSSLGSQLGSSLGSSGLGAGVAANLGRAASVGSLSVPPAWAAA-NQAVTPAARALP 342 Query 347 VSTVSAAPEAAPGSLLGGLPL-------AGAGGAGAGPRYGFRPTVMARPPFAG 393 ++++++A + APG +LGGLPL G GG R R VM R P AG Sbjct 343 LTSLTSAAQTAPGHMLGGLPLGQLTNSGGGFGGVSNALRMPPRAYVMPRVPAAG 396 >gi|308231818|ref|ZP_07413879.2| PPE family protein [Mycobacterium tuberculosis SUMu001] gi|308215968|gb|EFO75367.1| PPE family protein [Mycobacterium tuberculosis SUMu001] Length=395 Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 175/414 (43%), Positives = 230/414 (56%), Gaps = 40/414 (9%) Query 1 MDFGALPPEVNSVRMYAGPGSAPMVAAASAWNGLAAELSSAATGYETVITQLSSEGWLGP 60 MDFGALPPE+NS RMYAGPGSA +VAAA W+ +A++L SAA+ +++V+ L++ W+G Sbjct 1 MDFGALPPEINSARMYAGPGSASLVAAAKMWDSVASDLFSAASAFQSVVWGLTTGSWIGS 60 Query 61 ASAAMAEAVAPYVAWMSAAAAQAEQAATQARAAAAAFEAAFAATVPPPLIAANRASLMQL 120 ++ M A +PYVAWMS A QAE A Q R AAAA+E A+ TVPPP+IA NRA LM L Sbjct 61 SAGLMVAAASPYVAWMSVTAGQAELTAAQVRVAAAAYETAYGLTVPPPVIAENRAELMIL 120 Query 121 ISTNVFGQNTSAIAAAEAQYGEMWAQDSAAMYAY-AGSSASASAVTPFSTPPQIANPTAQ 179 I+TN+ GQNT AIA EA+YGEMWAQD+AAM+ Y A ++ + A+ PF P I NP Sbjct 121 IATNLLGQNTPAIAVNEAEYGEMWAQDAAAMFGYAATAATATEALLPFEDAPLITNPGGL 180 Query 180 GTQAAAVATAAGTAQSTLTEMITGLPNALQSLTSPLLQSSNGPLSWLWQILFGTPNFPTS 239 QA AV A TA + +++ +P ALQ L P +W Sbjct 181 LEQAVAVEEAIDTAAA--NQLMNNVPQALQQLAQPTKS--------IWPF--------DQ 222 Query 240 ISALLTDLQPYASFFYNTEGLPYFSIGMGNNFIQSAKTLG--LIGSAAPAAVAAAGDAAK 297 +S L + P+ S N + + M N+ + A TL L G A AA A A Sbjct 223 LSELWKAISPHLSPLSNIVSMLNNHVSMTNSGVSMASTLHSMLKGFAPAAAQAVETAAQN 282 Query 298 GLPGLGGMLGGGP-----------VAAGLGNAASVGKLSVPPVWSGPLPGSVTPGAAPLP 346 G+ + + VAA LG AASVG LSVP W+ +VTP A LP Sbjct 283 GVQAMSSLGSQLGSSLGSSGLGAGVAANLGRAASVGSLSVPQAWAAA-NQAVTPAARALP 341 Query 347 VSTVSAAPEAAPGSLLGGLPL-------AGAGGAGAGPRYGFRPTVMARPPFAG 393 ++++++A + APG +LGGLPL G GG R R VM R P AG Sbjct 342 LTSLTSAAQTAPGHMLGGLPLGQLTNSGGGFGGVSNALRMPPRAYVMPRVPAAG 395 >gi|289554847|ref|ZP_06444057.1| PPE family protein [Mycobacterium tuberculosis KZN 605] gi|289439479|gb|EFD21972.1| PPE family protein [Mycobacterium tuberculosis KZN 605] Length=395 Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 175/414 (43%), Positives = 230/414 (56%), Gaps = 40/414 (9%) Query 1 MDFGALPPEVNSVRMYAGPGSAPMVAAASAWNGLAAELSSAATGYETVITQLSSEGWLGP 60 MDFGALPPE+NS RMYAGPGSA +VAAA W+ +A++L SAA+ +++V+ L++ W+G Sbjct 1 MDFGALPPEINSARMYAGPGSASLVAAAKMWDSVASDLFSAASAFQSVVWGLTTGSWIGS 60 Query 61 ASAAMAEAVAPYVAWMSAAAAQAEQAATQARAAAAAFEAAFAATVPPPLIAANRASLMQL 120 ++ M A +PYVAWMS A QAE A Q R AAAA+E A+ TVPPP+IA NRA LM L Sbjct 61 SAGLMVAAASPYVAWMSVTAGQAELTAAQVRVAAAAYETAYGLTVPPPVIAENRAELMIL 120 Query 121 ISTNVFGQNTSAIAAAEAQYGEMWAQDSAAMYAY-AGSSASASAVTPFSTPPQIANPTAQ 179 I+TN+ GQNT AIA EA+YGEMWAQD+AAM+ Y A ++ + A+ PF P I NP Sbjct 121 IATNLLGQNTPAIAVNEAEYGEMWAQDAAAMFGYAATAATATEALLPFEDAPLITNPGGL 180 Query 180 GTQAAAVATAAGTAQSTLTEMITGLPNALQSLTSPLLQSSNGPLSWLWQILFGTPNFPTS 239 QA AV A TA + +++ +P ALQ L P +W Sbjct 181 LEQAVAVEEAIDTAAA--NQLMNNVPQALQQLAQPTKS--------IWPF--------DQ 222 Query 240 ISALLTDLQPYASFFYNTEGLPYFSIGMGNNFIQSAKTLG--LIGSAAPAAVAAAGDAAK 297 +S L + P+ S N + + M N+ + A TL L G A AA A A Sbjct 223 LSELWKAISPHLSPLSNIVSMLNNHVSMTNSGVSMASTLHSMLKGFAPAAAQAVETAAQN 282 Query 298 GLPGLGGMLGGGP-----------VAAGLGNAASVGKLSVPPVWSGPLPGSVTPGAAPLP 346 G+ + + VAA LG AASVG LSVP W+ +VTP A LP Sbjct 283 GVRAMSSLGSQLGSSLGSSGLGAGVAANLGRAASVGSLSVPQAWAAA-NQAVTPAARALP 341 Query 347 VSTVSAAPEAAPGSLLGGLPL-------AGAGGAGAGPRYGFRPTVMARPPFAG 393 ++++++A + APG +LGGLPL G GG R R VM R P AG Sbjct 342 LTSLTSAAQTAPGHMLGGLPLGQLTNSGGGFGGVSNALRMPPRAYVMPRVPAAG 395 Lambda K H 0.312 0.126 0.370 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 767373824232 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40