BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1790 Length=350 Score E Sequences producing significant alignments: (Bits) Value gi|15841259|ref|NP_336296.1| PPE family protein [Mycobacterium t... 681 0.0 gi|57116912|ref|YP_177836.1| PPE family protein [Mycobacterium t... 680 0.0 gi|308370824|ref|ZP_07422853.2| putative PPE family protein [Myc... 678 0.0 gi|289569856|ref|ZP_06450083.1| PPE family protein [Mycobacteriu... 677 0.0 gi|289574467|ref|ZP_06454694.1| PPE family protein [Mycobacteriu... 677 0.0 gi|31792978|ref|NP_855471.1| PPE family protein [Mycobacterium b... 677 0.0 gi|340626802|ref|YP_004745254.1| PPE family protein [Mycobacteri... 674 0.0 gi|306972117|ref|ZP_07484778.1| putative PPE family protein [Myc... 626 1e-177 gi|323719668|gb|EGB28789.1| PPE family protein [Mycobacterium tu... 607 9e-172 gi|307079826|ref|ZP_07488996.1| putative PPE family protein [Myc... 594 9e-168 gi|306776004|ref|ZP_07414341.1| PPE family protein [Mycobacteriu... 593 2e-167 gi|308402073|ref|ZP_07493516.2| hypothetical protein TMLG_01060 ... 515 5e-144 gi|148823002|ref|YP_001287756.1| PPE family protein [Mycobacteri... 513 1e-143 gi|289745781|ref|ZP_06505159.1| PPE family protein [Mycobacteriu... 504 8e-141 gi|294996698|ref|ZP_06802389.1| PPE family protein [Mycobacteriu... 487 2e-135 gi|289554441|ref|ZP_06443651.1| PPE family protein [Mycobacteriu... 485 4e-135 gi|253799173|ref|YP_003032174.1| PPE family protein [Mycobacteri... 485 4e-135 gi|297731334|ref|ZP_06960452.1| PPE family protein [Mycobacteriu... 485 6e-135 gi|289574463|ref|ZP_06454690.1| PPE family protein [Mycobacteriu... 484 7e-135 gi|344219609|gb|AEN00240.1| PPE family protein [Mycobacterium tu... 484 7e-135 gi|340626799|ref|YP_004745251.1| PPE family protein [Mycobacteri... 481 9e-134 gi|57116909|ref|YP_177833.1| PPE family protein [Mycobacterium t... 479 2e-133 gi|254231975|ref|ZP_04925302.1| PPE family protein [Mycobacteriu... 478 5e-133 gi|148661594|ref|YP_001283117.1| PPE family protein [Mycobacteri... 478 6e-133 gi|289569852|ref|ZP_06450079.1| PPE family protein [Mycobacteriu... 477 1e-132 gi|254364619|ref|ZP_04980665.1| PPE family protein [Mycobacteriu... 476 2e-132 gi|15841255|ref|NP_336292.1| PPE family protein [Mycobacterium t... 476 2e-132 gi|31792975|ref|NP_855468.1| PPE family protein [Mycobacterium b... 474 1e-131 gi|313658666|ref|ZP_07815546.1| PPE family protein [Mycobacteriu... 456 2e-126 gi|289447405|ref|ZP_06437149.1| PPE family protein [Mycobacteriu... 456 3e-126 gi|167967964|ref|ZP_02550241.1| PPE family protein [Mycobacteriu... 449 3e-124 gi|254550794|ref|ZP_05141241.1| PPE family protein [Mycobacteriu... 448 7e-124 gi|308379035|ref|ZP_07484774.2| putative PPE family protein [Myc... 429 4e-118 gi|307079822|ref|ZP_07488992.1| putative PPE family protein [Myc... 402 4e-110 gi|323719696|gb|EGB28816.1| PPE family protein [Mycobacterium tu... 390 1e-106 gi|306972073|ref|ZP_07484734.1| putative PPE family protein [Myc... 341 9e-92 gi|306775987|ref|ZP_07414324.1| putative PPE family protein [Myc... 330 2e-88 gi|323719699|gb|EGB28819.1| PPE family protein [Mycobacterium tu... 329 3e-88 gi|307079781|ref|ZP_07488951.1| putative PPE family protein [Myc... 318 7e-85 gi|323719408|gb|EGB28541.1| PPE family protein [Mycobacterium tu... 312 5e-83 gi|342861307|ref|ZP_08717955.1| PPE family protein [Mycobacteriu... 294 1e-77 gi|296164778|ref|ZP_06847340.1| PPE family protein [Mycobacteriu... 294 2e-77 gi|240172020|ref|ZP_04750679.1| PPE family protein [Mycobacteriu... 280 2e-73 gi|183981918|ref|YP_001850209.1| PPE family protein [Mycobacteri... 278 1e-72 gi|118617688|ref|YP_906020.1| PPE family protein [Mycobacterium ... 278 1e-72 gi|212596596|gb|ACJ35591.1| PPE24 [Mycobacterium intracellulare ... 270 4e-70 gi|15842434|ref|NP_337471.1| PPE family protein [Mycobacterium t... 266 4e-69 gi|340627882|ref|YP_004746334.1| PPE family protein [Mycobacteri... 266 4e-69 gi|298526361|ref|ZP_07013770.1| PPE family protein [Mycobacteriu... 262 6e-68 gi|254823004|ref|ZP_05228005.1| PPE family protein [Mycobacteriu... 260 3e-67 >gi|15841259|ref|NP_336296.1| PPE family protein [Mycobacterium tuberculosis CDC1551] gi|167967961|ref|ZP_02550238.1| PPE family protein [Mycobacterium tuberculosis H37Ra] gi|253799169|ref|YP_003032170.1| PPE family protein [Mycobacterium tuberculosis KZN 1435] gi|254550799|ref|ZP_05141246.1| PPE family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|13881486|gb|AAK46110.1| PPE family protein [Mycobacterium tuberculosis CDC1551] gi|253320672|gb|ACT25275.1| PPE family protein [Mycobacterium tuberculosis KZN 1435] gi|328458924|gb|AEB04347.1| PPE family protein [Mycobacterium tuberculosis KZN 4207] Length=363 Score = 681 bits (1757), Expect = 0.0, Method: Compositional matrix adjust. Identities = 350/350 (100%), Positives = 350/350 (100%), Gaps = 0/350 (0%) Query 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA Sbjct 14 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 73 Query 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL Sbjct 74 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 133 Query 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV Sbjct 134 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 193 Query 181 AQAVASVSWPNPNDWWLVRLLGSITPTERTTIVRLLGQSYLATGMARFLTSIAQQLTFGP 240 AQAVASVSWPNPNDWWLVRLLGSITPTERTTIVRLLGQSYLATGMARFLTSIAQQLTFGP Sbjct 194 AQAVASVSWPNPNDWWLVRLLGSITPTERTTIVRLLGQSYLATGMARFLTSIAQQLTFGP 253 Query 241 GGTTAGSGGAWYPTPQFAGLGAGPAVSASLARAEPVGRLSVPPSWAVAAPAFAEKPEAGT 300 GGTTAGSGGAWYPTPQFAGLGAGPAVSASLARAEPVGRLSVPPSWAVAAPAFAEKPEAGT Sbjct 254 GGTTAGSGGAWYPTPQFAGLGAGPAVSASLARAEPVGRLSVPPSWAVAAPAFAEKPEAGT 313 Query 301 PMSVIGEASSCGQGGLLRGIPLARAGRRTGAFAHRYGFRHSVITRSPSAG 350 PMSVIGEASSCGQGGLLRGIPLARAGRRTGAFAHRYGFRHSVITRSPSAG Sbjct 314 PMSVIGEASSCGQGGLLRGIPLARAGRRTGAFAHRYGFRHSVITRSPSAG 363 >gi|57116912|ref|YP_177836.1| PPE family protein [Mycobacterium tuberculosis H37Rv] gi|121637691|ref|YP_977914.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148661597|ref|YP_001283120.1| PPE family protein [Mycobacterium tuberculosis H37Ra] 47 more sequence titles Length=350 Score = 680 bits (1754), Expect = 0.0, Method: Compositional matrix adjust. Identities = 350/350 (100%), Positives = 350/350 (100%), Gaps = 0/350 (0%) Query 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA Sbjct 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 Query 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL Sbjct 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 Query 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV Sbjct 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 Query 181 AQAVASVSWPNPNDWWLVRLLGSITPTERTTIVRLLGQSYLATGMARFLTSIAQQLTFGP 240 AQAVASVSWPNPNDWWLVRLLGSITPTERTTIVRLLGQSYLATGMARFLTSIAQQLTFGP Sbjct 181 AQAVASVSWPNPNDWWLVRLLGSITPTERTTIVRLLGQSYLATGMARFLTSIAQQLTFGP 240 Query 241 GGTTAGSGGAWYPTPQFAGLGAGPAVSASLARAEPVGRLSVPPSWAVAAPAFAEKPEAGT 300 GGTTAGSGGAWYPTPQFAGLGAGPAVSASLARAEPVGRLSVPPSWAVAAPAFAEKPEAGT Sbjct 241 GGTTAGSGGAWYPTPQFAGLGAGPAVSASLARAEPVGRLSVPPSWAVAAPAFAEKPEAGT 300 Query 301 PMSVIGEASSCGQGGLLRGIPLARAGRRTGAFAHRYGFRHSVITRSPSAG 350 PMSVIGEASSCGQGGLLRGIPLARAGRRTGAFAHRYGFRHSVITRSPSAG Sbjct 301 PMSVIGEASSCGQGGLLRGIPLARAGRRTGAFAHRYGFRHSVITRSPSAG 350 >gi|308370824|ref|ZP_07422853.2| putative PPE family protein [Mycobacterium tuberculosis SUMu003] gi|308375681|ref|ZP_07444735.2| putative PPE family protein [Mycobacterium tuberculosis SUMu007] gi|308377826|ref|ZP_07480546.2| putative PPE family protein [Mycobacterium tuberculosis SUMu009] gi|308330738|gb|EFP19589.1| putative PPE family protein [Mycobacterium tuberculosis SUMu003] gi|308345534|gb|EFP34385.1| putative PPE family protein [Mycobacterium tuberculosis SUMu007] gi|308354478|gb|EFP43329.1| putative PPE family protein [Mycobacterium tuberculosis SUMu009] Length=390 Score = 678 bits (1749), Expect = 0.0, Method: Compositional matrix adjust. Identities = 349/350 (99%), Positives = 350/350 (100%), Gaps = 0/350 (0%) Query 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 +DFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA Sbjct 41 LDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 100 Query 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL Sbjct 101 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 160 Query 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV Sbjct 161 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 220 Query 181 AQAVASVSWPNPNDWWLVRLLGSITPTERTTIVRLLGQSYLATGMARFLTSIAQQLTFGP 240 AQAVASVSWPNPNDWWLVRLLGSITPTERTTIVRLLGQSYLATGMARFLTSIAQQLTFGP Sbjct 221 AQAVASVSWPNPNDWWLVRLLGSITPTERTTIVRLLGQSYLATGMARFLTSIAQQLTFGP 280 Query 241 GGTTAGSGGAWYPTPQFAGLGAGPAVSASLARAEPVGRLSVPPSWAVAAPAFAEKPEAGT 300 GGTTAGSGGAWYPTPQFAGLGAGPAVSASLARAEPVGRLSVPPSWAVAAPAFAEKPEAGT Sbjct 281 GGTTAGSGGAWYPTPQFAGLGAGPAVSASLARAEPVGRLSVPPSWAVAAPAFAEKPEAGT 340 Query 301 PMSVIGEASSCGQGGLLRGIPLARAGRRTGAFAHRYGFRHSVITRSPSAG 350 PMSVIGEASSCGQGGLLRGIPLARAGRRTGAFAHRYGFRHSVITRSPSAG Sbjct 341 PMSVIGEASSCGQGGLLRGIPLARAGRRTGAFAHRYGFRHSVITRSPSAG 390 >gi|289569856|ref|ZP_06450083.1| PPE family protein [Mycobacterium tuberculosis T17] gi|289543610|gb|EFD47258.1| PPE family protein [Mycobacterium tuberculosis T17] Length=350 Score = 677 bits (1748), Expect = 0.0, Method: Compositional matrix adjust. Identities = 349/350 (99%), Positives = 349/350 (99%), Gaps = 0/350 (0%) Query 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA Sbjct 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 Query 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 ASLSM AAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL Sbjct 61 ASLSMEAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 Query 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV Sbjct 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 Query 181 AQAVASVSWPNPNDWWLVRLLGSITPTERTTIVRLLGQSYLATGMARFLTSIAQQLTFGP 240 AQAVASVSWPNPNDWWLVRLLGSITPTERTTIVRLLGQSYLATGMARFLTSIAQQLTFGP Sbjct 181 AQAVASVSWPNPNDWWLVRLLGSITPTERTTIVRLLGQSYLATGMARFLTSIAQQLTFGP 240 Query 241 GGTTAGSGGAWYPTPQFAGLGAGPAVSASLARAEPVGRLSVPPSWAVAAPAFAEKPEAGT 300 GGTTAGSGGAWYPTPQFAGLGAGPAVSASLARAEPVGRLSVPPSWAVAAPAFAEKPEAGT Sbjct 241 GGTTAGSGGAWYPTPQFAGLGAGPAVSASLARAEPVGRLSVPPSWAVAAPAFAEKPEAGT 300 Query 301 PMSVIGEASSCGQGGLLRGIPLARAGRRTGAFAHRYGFRHSVITRSPSAG 350 PMSVIGEASSCGQGGLLRGIPLARAGRRTGAFAHRYGFRHSVITRSPSAG Sbjct 301 PMSVIGEASSCGQGGLLRGIPLARAGRRTGAFAHRYGFRHSVITRSPSAG 350 >gi|289574467|ref|ZP_06454694.1| PPE family protein [Mycobacterium tuberculosis K85] gi|289538898|gb|EFD43476.1| PPE family protein [Mycobacterium tuberculosis K85] Length=350 Score = 677 bits (1748), Expect = 0.0, Method: Compositional matrix adjust. Identities = 349/350 (99%), Positives = 349/350 (99%), Gaps = 0/350 (0%) Query 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTG PWVGA Sbjct 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGPPWVGA 60 Query 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL Sbjct 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 Query 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV Sbjct 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 Query 181 AQAVASVSWPNPNDWWLVRLLGSITPTERTTIVRLLGQSYLATGMARFLTSIAQQLTFGP 240 AQAVASVSWPNPNDWWLVRLLGSITPTERTTIVRLLGQSYLATGMARFLTSIAQQLTFGP Sbjct 181 AQAVASVSWPNPNDWWLVRLLGSITPTERTTIVRLLGQSYLATGMARFLTSIAQQLTFGP 240 Query 241 GGTTAGSGGAWYPTPQFAGLGAGPAVSASLARAEPVGRLSVPPSWAVAAPAFAEKPEAGT 300 GGTTAGSGGAWYPTPQFAGLGAGPAVSASLARAEPVGRLSVPPSWAVAAPAFAEKPEAGT Sbjct 241 GGTTAGSGGAWYPTPQFAGLGAGPAVSASLARAEPVGRLSVPPSWAVAAPAFAEKPEAGT 300 Query 301 PMSVIGEASSCGQGGLLRGIPLARAGRRTGAFAHRYGFRHSVITRSPSAG 350 PMSVIGEASSCGQGGLLRGIPLARAGRRTGAFAHRYGFRHSVITRSPSAG Sbjct 301 PMSVIGEASSCGQGGLLRGIPLARAGRRTGAFAHRYGFRHSVITRSPSAG 350 >gi|31792978|ref|NP_855471.1| PPE family protein [Mycobacterium bovis AF2122/97] gi|31618569|emb|CAD94521.1| PPE FAMILY PROTEIN [Mycobacterium bovis AF2122/97] Length=350 Score = 677 bits (1747), Expect = 0.0, Method: Compositional matrix adjust. Identities = 349/350 (99%), Positives = 349/350 (99%), Gaps = 0/350 (0%) Query 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA Sbjct 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 Query 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL Sbjct 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 Query 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV Sbjct 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 Query 181 AQAVASVSWPNPNDWWLVRLLGSITPTERTTIVRLLGQSYLATGMARFLTSIAQQLTFGP 240 AQAVASVSW NPNDWWLVRLLGSITPTERTTIVRLLGQSYLATGMARFLTSIAQQLTFGP Sbjct 181 AQAVASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSYLATGMARFLTSIAQQLTFGP 240 Query 241 GGTTAGSGGAWYPTPQFAGLGAGPAVSASLARAEPVGRLSVPPSWAVAAPAFAEKPEAGT 300 GGTTAGSGGAWYPTPQFAGLGAGPAVSASLARAEPVGRLSVPPSWAVAAPAFAEKPEAGT Sbjct 241 GGTTAGSGGAWYPTPQFAGLGAGPAVSASLARAEPVGRLSVPPSWAVAAPAFAEKPEAGT 300 Query 301 PMSVIGEASSCGQGGLLRGIPLARAGRRTGAFAHRYGFRHSVITRSPSAG 350 PMSVIGEASSCGQGGLLRGIPLARAGRRTGAFAHRYGFRHSVITRSPSAG Sbjct 301 PMSVIGEASSCGQGGLLRGIPLARAGRRTGAFAHRYGFRHSVITRSPSAG 350 >gi|340626802|ref|YP_004745254.1| PPE family protein [Mycobacterium canettii CIPT 140010059] gi|340004992|emb|CCC44140.1| PPE family protein [Mycobacterium canettii CIPT 140010059] Length=350 Score = 674 bits (1738), Expect = 0.0, Method: Compositional matrix adjust. Identities = 347/350 (99%), Positives = 348/350 (99%), Gaps = 0/350 (0%) Query 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA Sbjct 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 Query 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL Sbjct 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 Query 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV Sbjct 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 Query 181 AQAVASVSWPNPNDWWLVRLLGSITPTERTTIVRLLGQSYLATGMARFLTSIAQQLTFGP 240 AQAVASVSWPNPNDWWLVRLLGSITPTERTTIVRLLGQSYLATGMARFLTSIAQQLTFGP Sbjct 181 AQAVASVSWPNPNDWWLVRLLGSITPTERTTIVRLLGQSYLATGMARFLTSIAQQLTFGP 240 Query 241 GGTTAGSGGAWYPTPQFAGLGAGPAVSASLARAEPVGRLSVPPSWAVAAPAFAEKPEAGT 300 GGTTAGSGGAWYPTPQFAGLGA AVSASLARAEPVGRLSVPPSWAVAAPAFAEKPEAGT Sbjct 241 GGTTAGSGGAWYPTPQFAGLGASRAVSASLARAEPVGRLSVPPSWAVAAPAFAEKPEAGT 300 Query 301 PMSVIGEASSCGQGGLLRGIPLARAGRRTGAFAHRYGFRHSVITRSPSAG 350 PMSVIGEASSCGQGGLLRGIPLARAGRR+GAFAHRYGFRHSVITRSPSAG Sbjct 301 PMSVIGEASSCGQGGLLRGIPLARAGRRSGAFAHRYGFRHSVITRSPSAG 350 >gi|306972117|ref|ZP_07484778.1| putative PPE family protein [Mycobacterium tuberculosis SUMu010] gi|308358405|gb|EFP47256.1| putative PPE family protein [Mycobacterium tuberculosis SUMu010] Length=326 Score = 626 bits (1615), Expect = 1e-177, Method: Compositional matrix adjust. Identities = 325/326 (99%), Positives = 326/326 (100%), Gaps = 0/326 (0%) Query 25 LAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGAASLSMVAAATPYVAWLSQAAARAE 84 +AAAAAWDGVAVELGLAATGYASVIAELTGAPWVGAASLSMVAAATPYVAWLSQAAARAE Sbjct 1 MAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGAASLSMVAAATPYVAWLSQAAARAE 60 Query 85 QAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTLIATNFFGQNSAAIAVAEAQYAEMW 144 QAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTLIATNFFGQNSAAIAVAEAQYAEMW Sbjct 61 QAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTLIATNFFGQNSAAIAVAEAQYAEMW 120 Query 145 AQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVVAQAVASVSWPNPNDWWLVRLLGSI 204 AQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVVAQAVASVSWPNPNDWWLVRLLGSI Sbjct 121 AQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVVAQAVASVSWPNPNDWWLVRLLGSI 180 Query 205 TPTERTTIVRLLGQSYLATGMARFLTSIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGAGP 264 TPTERTTIVRLLGQSYLATGMARFLTSIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGAGP Sbjct 181 TPTERTTIVRLLGQSYLATGMARFLTSIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGAGP 240 Query 265 AVSASLARAEPVGRLSVPPSWAVAAPAFAEKPEAGTPMSVIGEASSCGQGGLLRGIPLAR 324 AVSASLARAEPVGRLSVPPSWAVAAPAFAEKPEAGTPMSVIGEASSCGQGGLLRGIPLAR Sbjct 241 AVSASLARAEPVGRLSVPPSWAVAAPAFAEKPEAGTPMSVIGEASSCGQGGLLRGIPLAR 300 Query 325 AGRRTGAFAHRYGFRHSVITRSPSAG 350 AGRRTGAFAHRYGFRHSVITRSPSAG Sbjct 301 AGRRTGAFAHRYGFRHSVITRSPSAG 326 >gi|323719668|gb|EGB28789.1| PPE family protein [Mycobacterium tuberculosis CDC1551A] Length=315 Score = 607 bits (1565), Expect = 9e-172, Method: Compositional matrix adjust. Identities = 314/315 (99%), Positives = 315/315 (100%), Gaps = 0/315 (0%) Query 36 VELGLAATGYASVIAELTGAPWVGAASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAA 95 +ELGLAATGYASVIAELTGAPWVGAASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAA Sbjct 1 MELGLAATGYASVIAELTGAPWVGAASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAA 60 Query 96 AYEAAFVMTVPPPVITANRVLVMTLIATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYA 155 AYEAAFVMTVPPPVITANRVLVMTLIATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYA Sbjct 61 AYEAAFVMTVPPPVITANRVLVMTLIATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYA 120 Query 156 AASASASRLIPFAAPPKTTNSAGVVAQAVASVSWPNPNDWWLVRLLGSITPTERTTIVRL 215 AASASASRLIPFAAPPKTTNSAGVVAQAVASVSWPNPNDWWLVRLLGSITPTERTTIVRL Sbjct 121 AASASASRLIPFAAPPKTTNSAGVVAQAVASVSWPNPNDWWLVRLLGSITPTERTTIVRL 180 Query 216 LGQSYLATGMARFLTSIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGAGPAVSASLARAEP 275 LGQSYLATGMARFLTSIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGAGPAVSASLARAEP Sbjct 181 LGQSYLATGMARFLTSIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGAGPAVSASLARAEP 240 Query 276 VGRLSVPPSWAVAAPAFAEKPEAGTPMSVIGEASSCGQGGLLRGIPLARAGRRTGAFAHR 335 VGRLSVPPSWAVAAPAFAEKPEAGTPMSVIGEASSCGQGGLLRGIPLARAGRRTGAFAHR Sbjct 241 VGRLSVPPSWAVAAPAFAEKPEAGTPMSVIGEASSCGQGGLLRGIPLARAGRRTGAFAHR 300 Query 336 YGFRHSVITRSPSAG 350 YGFRHSVITRSPSAG Sbjct 301 YGFRHSVITRSPSAG 315 >gi|307079826|ref|ZP_07488996.1| putative PPE family protein [Mycobacterium tuberculosis SUMu011] gi|308362315|gb|EFP51166.1| putative PPE family protein [Mycobacterium tuberculosis SUMu011] Length=309 Score = 594 bits (1531), Expect = 9e-168, Method: Compositional matrix adjust. Identities = 307/307 (100%), Positives = 307/307 (100%), Gaps = 0/307 (0%) Query 44 GYASVIAELTGAPWVGAASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVM 103 GYASVIAELTGAPWVGAASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVM Sbjct 3 GYASVIAELTGAPWVGAASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVM 62 Query 104 TVPPPVITANRVLVMTLIATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASR 163 TVPPPVITANRVLVMTLIATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASR Sbjct 63 TVPPPVITANRVLVMTLIATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASR 122 Query 164 LIPFAAPPKTTNSAGVVAQAVASVSWPNPNDWWLVRLLGSITPTERTTIVRLLGQSYLAT 223 LIPFAAPPKTTNSAGVVAQAVASVSWPNPNDWWLVRLLGSITPTERTTIVRLLGQSYLAT Sbjct 123 LIPFAAPPKTTNSAGVVAQAVASVSWPNPNDWWLVRLLGSITPTERTTIVRLLGQSYLAT 182 Query 224 GMARFLTSIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGAGPAVSASLARAEPVGRLSVPP 283 GMARFLTSIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGAGPAVSASLARAEPVGRLSVPP Sbjct 183 GMARFLTSIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGAGPAVSASLARAEPVGRLSVPP 242 Query 284 SWAVAAPAFAEKPEAGTPMSVIGEASSCGQGGLLRGIPLARAGRRTGAFAHRYGFRHSVI 343 SWAVAAPAFAEKPEAGTPMSVIGEASSCGQGGLLRGIPLARAGRRTGAFAHRYGFRHSVI Sbjct 243 SWAVAAPAFAEKPEAGTPMSVIGEASSCGQGGLLRGIPLARAGRRTGAFAHRYGFRHSVI 302 Query 344 TRSPSAG 350 TRSPSAG Sbjct 303 TRSPSAG 309 >gi|306776004|ref|ZP_07414341.1| PPE family protein [Mycobacterium tuberculosis SUMu001] gi|308215537|gb|EFO74936.1| PPE family protein [Mycobacterium tuberculosis SUMu001] Length=315 Score = 593 bits (1528), Expect = 2e-167, Method: Compositional matrix adjust. Identities = 307/307 (100%), Positives = 307/307 (100%), Gaps = 0/307 (0%) Query 44 GYASVIAELTGAPWVGAASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVM 103 GYASVIAELTGAPWVGAASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVM Sbjct 9 GYASVIAELTGAPWVGAASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVM 68 Query 104 TVPPPVITANRVLVMTLIATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASR 163 TVPPPVITANRVLVMTLIATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASR Sbjct 69 TVPPPVITANRVLVMTLIATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASR 128 Query 164 LIPFAAPPKTTNSAGVVAQAVASVSWPNPNDWWLVRLLGSITPTERTTIVRLLGQSYLAT 223 LIPFAAPPKTTNSAGVVAQAVASVSWPNPNDWWLVRLLGSITPTERTTIVRLLGQSYLAT Sbjct 129 LIPFAAPPKTTNSAGVVAQAVASVSWPNPNDWWLVRLLGSITPTERTTIVRLLGQSYLAT 188 Query 224 GMARFLTSIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGAGPAVSASLARAEPVGRLSVPP 283 GMARFLTSIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGAGPAVSASLARAEPVGRLSVPP Sbjct 189 GMARFLTSIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGAGPAVSASLARAEPVGRLSVPP 248 Query 284 SWAVAAPAFAEKPEAGTPMSVIGEASSCGQGGLLRGIPLARAGRRTGAFAHRYGFRHSVI 343 SWAVAAPAFAEKPEAGTPMSVIGEASSCGQGGLLRGIPLARAGRRTGAFAHRYGFRHSVI Sbjct 249 SWAVAAPAFAEKPEAGTPMSVIGEASSCGQGGLLRGIPLARAGRRTGAFAHRYGFRHSVI 308 Query 344 TRSPSAG 350 TRSPSAG Sbjct 309 TRSPSAG 315 >gi|308402073|ref|ZP_07493516.2| hypothetical protein TMLG_01060 [Mycobacterium tuberculosis SUMu012] gi|308365994|gb|EFP54845.1| hypothetical protein TMLG_01060 [Mycobacterium tuberculosis SUMu012] Length=263 Score = 515 bits (1326), Expect = 5e-144, Method: Compositional matrix adjust. Identities = 263/263 (100%), Positives = 263/263 (100%), Gaps = 0/263 (0%) Query 88 MQAAAAAAAYEAAFVMTVPPPVITANRVLVMTLIATNFFGQNSAAIAVAEAQYAEMWAQD 147 MQAAAAAAAYEAAFVMTVPPPVITANRVLVMTLIATNFFGQNSAAIAVAEAQYAEMWAQD Sbjct 1 MQAAAAAAAYEAAFVMTVPPPVITANRVLVMTLIATNFFGQNSAAIAVAEAQYAEMWAQD 60 Query 148 AVAMYGYAAASASASRLIPFAAPPKTTNSAGVVAQAVASVSWPNPNDWWLVRLLGSITPT 207 AVAMYGYAAASASASRLIPFAAPPKTTNSAGVVAQAVASVSWPNPNDWWLVRLLGSITPT Sbjct 61 AVAMYGYAAASASASRLIPFAAPPKTTNSAGVVAQAVASVSWPNPNDWWLVRLLGSITPT 120 Query 208 ERTTIVRLLGQSYLATGMARFLTSIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGAGPAVS 267 ERTTIVRLLGQSYLATGMARFLTSIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGAGPAVS Sbjct 121 ERTTIVRLLGQSYLATGMARFLTSIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGAGPAVS 180 Query 268 ASLARAEPVGRLSVPPSWAVAAPAFAEKPEAGTPMSVIGEASSCGQGGLLRGIPLARAGR 327 ASLARAEPVGRLSVPPSWAVAAPAFAEKPEAGTPMSVIGEASSCGQGGLLRGIPLARAGR Sbjct 181 ASLARAEPVGRLSVPPSWAVAAPAFAEKPEAGTPMSVIGEASSCGQGGLLRGIPLARAGR 240 Query 328 RTGAFAHRYGFRHSVITRSPSAG 350 RTGAFAHRYGFRHSVITRSPSAG Sbjct 241 RTGAFAHRYGFRHSVITRSPSAG 263 >gi|148823002|ref|YP_001287756.1| PPE family protein [Mycobacterium tuberculosis F11] gi|148721529|gb|ABR06154.1| PPE family protein [Mycobacterium tuberculosis F11] Length=350 Score = 513 bits (1322), Expect = 1e-143, Method: Compositional matrix adjust. Identities = 315/351 (90%), Positives = 321/351 (92%), Gaps = 2/351 (0%) Query 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA Sbjct 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 Query 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL Sbjct 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 Query 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV Sbjct 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 Query 181 AQAVASVSWPNPNDWWLVRLLGSITPTERTTIVRLLGQSYLATGMARFLTSIAQQLTFGP 240 AQAVASVSWPNPNDWWLVRLLGSITPTERTTIVRLLGQSYLATGMARFLTSIAQQLTFGP Sbjct 181 AQAVASVSWPNPNDWWLVRLLGSITPTERTTIVRLLGQSYLATGMARFLTSIAQQLTFGP 240 Query 241 GGTTAGSGGAWYPTPQFAGLGAGPAVSASLARAEPVGRLSVPPSWAVAAPAFAEKPEAGT 300 GGTTAGSGGAWYPTPQFAGLGA AVSASLARA +G LSVPPSW V A E P A Sbjct 241 GGTTAGSGGAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSW-VKTTALTESPVAHA 299 Query 301 PMSVIGEASSCGQGGLLRGIPL-ARAGRRTGAFAHRYGFRHSVITRSPSAG 350 + SS G GLLRG+PL +R RR+GAFAHRYGFRHSV+ R PSAG Sbjct 300 VSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVARPPSAG 350 >gi|289745781|ref|ZP_06505159.1| PPE family protein [Mycobacterium tuberculosis 02_1987] gi|289686309|gb|EFD53797.1| PPE family protein [Mycobacterium tuberculosis 02_1987] Length=390 Score = 504 bits (1298), Expect = 8e-141, Method: Compositional matrix adjust. Identities = 310/351 (89%), Positives = 318/351 (91%), Gaps = 2/351 (0%) Query 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 +DFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA Sbjct 41 LDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 100 Query 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL Sbjct 101 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 160 Query 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV Sbjct 161 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 220 Query 181 AQAVASVSWPNPNDWWLVRLLGSITPTERTTIVRLLGQSYLATGMARFLTSIAQQLTFGP 240 AQAVASVSWPNPNDWWLVRLLGSITPTERTTIVRLLGQSY ATGMA+F SIAQQLTFGP Sbjct 221 AQAVASVSWPNPNDWWLVRLLGSITPTERTTIVRLLGQSYFATGMAQFFASIAQQLTFGP 280 Query 241 GGTTAGSGGAWYPTPQFAGLGAGPAVSASLARAEPVGRLSVPPSWAVAAPAFAEKPEAGT 300 GGTTAGSGGAWYPTPQFAGLGA AVSASLARA +G LSVPPSW V A E P A Sbjct 281 GGTTAGSGGAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSW-VKTTALTESPVAHA 339 Query 301 PMSVIGEASSCGQGGLLRGIPL-ARAGRRTGAFAHRYGFRHSVITRSPSAG 350 + SS G GLLRG+PL +R RR+GAFAHRYGFRHSV+ R PSAG Sbjct 340 VSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVARPPSAG 390 >gi|294996698|ref|ZP_06802389.1| PPE family protein [Mycobacterium tuberculosis 210] gi|297634345|ref|ZP_06952125.1| PPE family protein [Mycobacterium tuberculosis KZN 4207] Length=365 Score = 487 bits (1253), Expect = 2e-135, Method: Compositional matrix adjust. Identities = 308/366 (85%), Positives = 318/366 (87%), Gaps = 17/366 (4%) Query 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA Sbjct 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 Query 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL Sbjct 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 Query 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSA--- 177 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSA Sbjct 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 Query 178 ----------GVVAQ--AVASVSWPNPNDWWLVRLLGSITPTERTTIVRLLGQSYLATGM 225 G++ + + ASVSW NPNDWWLVRLLGSITPTERTTIVRLLGQSYLATGM Sbjct 181 AQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSYLATGM 240 Query 226 ARFLTSIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGAGPAVSASLARAEPVGRLSVPPSW 285 ARFLTSIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGA AVSASLARA +G LSVPPSW Sbjct 241 ARFLTSIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSW 300 Query 286 AVAAPAFAEKPEAGTPMSVIGEASSCGQGGLLRGIPL-ARAGRRTGAFAHRYGFRHSVIT 344 V A E P A + SS G GLLRG+PL +R RR+GAFAHRYGFRHSV+ Sbjct 301 -VKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVA 359 Query 345 RSPSAG 350 R PSAG Sbjct 360 RPPSAG 365 >gi|289554441|ref|ZP_06443651.1| PPE family protein [Mycobacterium tuberculosis KZN 605] gi|289439073|gb|EFD21566.1| PPE family protein [Mycobacterium tuberculosis KZN 605] Length=391 Score = 485 bits (1249), Expect = 4e-135, Method: Compositional matrix adjust. Identities = 307/366 (84%), Positives = 318/366 (87%), Gaps = 17/366 (4%) Query 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 +DFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA Sbjct 27 LDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 86 Query 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL Sbjct 87 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 146 Query 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSA--- 177 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSA Sbjct 147 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 206 Query 178 ----------GVVAQ--AVASVSWPNPNDWWLVRLLGSITPTERTTIVRLLGQSYLATGM 225 G++ + + ASVSW NPNDWWLVRLLGSITPTERTTIVRLLGQSYLATGM Sbjct 207 AQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSYLATGM 266 Query 226 ARFLTSIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGAGPAVSASLARAEPVGRLSVPPSW 285 ARFLTSIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGA AVSASLARA +G LSVPPSW Sbjct 267 ARFLTSIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSW 326 Query 286 AVAAPAFAEKPEAGTPMSVIGEASSCGQGGLLRGIPL-ARAGRRTGAFAHRYGFRHSVIT 344 V A E P A + SS G GLLRG+PL +R RR+GAFAHRYGFRHSV+ Sbjct 327 -VKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVA 385 Query 345 RSPSAG 350 R PSAG Sbjct 386 RPPSAG 391 >gi|253799173|ref|YP_003032174.1| PPE family protein [Mycobacterium tuberculosis KZN 1435] gi|253320676|gb|ACT25279.1| PPE family protein [Mycobacterium tuberculosis KZN 1435] gi|328458928|gb|AEB04351.1| PPE family protein [Mycobacterium tuberculosis KZN 4207] Length=405 Score = 485 bits (1249), Expect = 4e-135, Method: Compositional matrix adjust. Identities = 307/366 (84%), Positives = 318/366 (87%), Gaps = 17/366 (4%) Query 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 +DFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA Sbjct 41 LDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 100 Query 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL Sbjct 101 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 160 Query 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSA--- 177 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSA Sbjct 161 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 220 Query 178 ----------GVVAQ--AVASVSWPNPNDWWLVRLLGSITPTERTTIVRLLGQSYLATGM 225 G++ + + ASVSW NPNDWWLVRLLGSITPTERTTIVRLLGQSYLATGM Sbjct 221 AQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSYLATGM 280 Query 226 ARFLTSIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGAGPAVSASLARAEPVGRLSVPPSW 285 ARFLTSIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGA AVSASLARA +G LSVPPSW Sbjct 281 ARFLTSIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSW 340 Query 286 AVAAPAFAEKPEAGTPMSVIGEASSCGQGGLLRGIPL-ARAGRRTGAFAHRYGFRHSVIT 344 V A E P A + SS G GLLRG+PL +R RR+GAFAHRYGFRHSV+ Sbjct 341 -VKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVA 399 Query 345 RSPSAG 350 R PSAG Sbjct 400 RPPSAG 405 >gi|297731334|ref|ZP_06960452.1| PPE family protein [Mycobacterium tuberculosis KZN R506] Length=371 Score = 485 bits (1248), Expect = 6e-135, Method: Compositional matrix adjust. Identities = 307/366 (84%), Positives = 318/366 (87%), Gaps = 17/366 (4%) Query 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 +DFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA Sbjct 7 LDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 66 Query 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL Sbjct 67 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 126 Query 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSA--- 177 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSA Sbjct 127 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 186 Query 178 ----------GVVAQ--AVASVSWPNPNDWWLVRLLGSITPTERTTIVRLLGQSYLATGM 225 G++ + + ASVSW NPNDWWLVRLLGSITPTERTTIVRLLGQSYLATGM Sbjct 187 AQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSYLATGM 246 Query 226 ARFLTSIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGAGPAVSASLARAEPVGRLSVPPSW 285 ARFLTSIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGA AVSASLARA +G LSVPPSW Sbjct 247 ARFLTSIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSW 306 Query 286 AVAAPAFAEKPEAGTPMSVIGEASSCGQGGLLRGIPL-ARAGRRTGAFAHRYGFRHSVIT 344 V A E P A + SS G GLLRG+PL +R RR+GAFAHRYGFRHSV+ Sbjct 307 -VKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVA 365 Query 345 RSPSAG 350 R PSAG Sbjct 366 RPPSAG 371 >gi|289574463|ref|ZP_06454690.1| PPE family protein [Mycobacterium tuberculosis K85] gi|289538894|gb|EFD43472.1| PPE family protein [Mycobacterium tuberculosis K85] Length=365 Score = 484 bits (1247), Expect = 7e-135, Method: Compositional matrix adjust. Identities = 303/366 (83%), Positives = 314/366 (86%), Gaps = 17/366 (4%) Query 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 MDFGALPPEINSGRMYCGPGSGPMLAAAA WDGVAVELGLAATGYASVIAELTGAPWVGA Sbjct 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAPWDGVAVELGLAATGYASVIAELTGAPWVGA 60 Query 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL Sbjct 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 Query 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSA--- 177 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSA Sbjct 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 Query 178 ----------GVVAQ--AVASVSWPNPNDWWLVRLLGSITPTERTTIVRLLGQSYLATGM 225 G++ + + ASVSW NPNDWWLVRLLGSITPTERTTIVRLLGQSY ATGM Sbjct 181 AQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSYFATGM 240 Query 226 ARFLTSIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGAGPAVSASLARAEPVGRLSVPPSW 285 A+F SIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGA AVSASLARA +G LSVPPSW Sbjct 241 AQFFASIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSW 300 Query 286 AVAAPAFAEKPEAGTPMSVIGEASSCGQGGLLRGIPL-ARAGRRTGAFAHRYGFRHSVIT 344 V A E P A + SS G GLLRG+PL +R RR+GAFAHRYGFRHSV+ Sbjct 301 -VKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVA 359 Query 345 RSPSAG 350 R PSAG Sbjct 360 RPPSAG 365 >gi|344219609|gb|AEN00240.1| PPE family protein [Mycobacterium tuberculosis CTRI-2] Length=365 Score = 484 bits (1247), Expect = 7e-135, Method: Compositional matrix adjust. Identities = 307/366 (84%), Positives = 317/366 (87%), Gaps = 17/366 (4%) Query 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA Sbjct 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 Query 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL Sbjct 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 Query 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSA--- 177 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSA Sbjct 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 Query 178 ----------GVVAQ--AVASVSWPNPNDWWLVRLLGSITPTERTTIVRLLGQSYLATGM 225 G++ + + ASVSW NPNDWWLVRLLGSITPTERTTIVRLLGQSYLATGM Sbjct 181 AQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSYLATGM 240 Query 226 ARFLTSIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGAGPAVSASLARAEPVGRLSVPPSW 285 ARFLTSIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGA AVSASLAR +G LSVPPSW Sbjct 241 ARFLTSIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVSASLARGNKIGALSVPPSW 300 Query 286 AVAAPAFAEKPEAGTPMSVIGEASSCGQGGLLRGIPL-ARAGRRTGAFAHRYGFRHSVIT 344 V A E P A + SS G GLLRG+PL +R RR+GAFAHRYGFRHSV+ Sbjct 301 -VKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVA 359 Query 345 RSPSAG 350 R PSAG Sbjct 360 RPPSAG 365 >gi|340626799|ref|YP_004745251.1| PPE family protein [Mycobacterium canettii CIPT 140010059] gi|340004989|emb|CCC44137.1| PPE family protein [Mycobacterium canettii CIPT 140010059] Length=365 Score = 481 bits (1237), Expect = 9e-134, Method: Compositional matrix adjust. Identities = 304/366 (84%), Positives = 315/366 (87%), Gaps = 17/366 (4%) Query 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA Sbjct 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 Query 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL Sbjct 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 Query 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSA--- 177 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSA Sbjct 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 Query 178 ----------GVVAQ--AVASVSWPNPNDWWLVRLLGSITPTERTTIVRLLGQSYLATGM 225 G++ + + ASVSWPNPNDWWLVRLLGSITPTERTTIVRLLGQSY ATGM Sbjct 181 AQVAAVAAMPGLLQRLSSAASVSWPNPNDWWLVRLLGSITPTERTTIVRLLGQSYFATGM 240 Query 226 ARFLTSIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGAGPAVSASLARAEPVGRLSVPPSW 285 A+F SIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGA AVSASLARA +G LSVPPSW Sbjct 241 AQFFASIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSW 300 Query 286 AVAAPAFAEKPEAGTPMSVIGEASSCGQGGLLRGIPL-ARAGRRTGAFAHRYGFRHSVIT 344 V A E P A + SS G GLLRG+PL +R RR+G FAHRYGFRHSV+ Sbjct 301 -VKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITRRSGTFAHRYGFRHSVVA 359 Query 345 RSPSAG 350 R PSAG Sbjct 360 RPPSAG 365 >gi|57116909|ref|YP_177833.1| PPE family protein [Mycobacterium tuberculosis H37Rv] gi|289447401|ref|ZP_06437145.1| PPE family protein [Mycobacterium tuberculosis CPHL_A] gi|289750354|ref|ZP_06509732.1| PPE family protein [Mycobacterium tuberculosis T92] 17 more sequence titles Length=365 Score = 479 bits (1234), Expect = 2e-133, Method: Compositional matrix adjust. Identities = 304/366 (84%), Positives = 315/366 (87%), Gaps = 17/366 (4%) Query 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA Sbjct 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 Query 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL Sbjct 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 Query 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSA--- 177 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSA Sbjct 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 Query 178 ----------GVVAQ--AVASVSWPNPNDWWLVRLLGSITPTERTTIVRLLGQSYLATGM 225 G++ + + ASVSW NPNDWWLVRLLGSITPTERTTIVRLLGQSY ATGM Sbjct 181 AQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSYFATGM 240 Query 226 ARFLTSIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGAGPAVSASLARAEPVGRLSVPPSW 285 A+F SIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGA AVSASLARA +G LSVPPSW Sbjct 241 AQFFASIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSW 300 Query 286 AVAAPAFAEKPEAGTPMSVIGEASSCGQGGLLRGIPL-ARAGRRTGAFAHRYGFRHSVIT 344 V A E P A + SS G GLLRG+PL +R RR+GAFAHRYGFRHSV+ Sbjct 301 -VKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVA 359 Query 345 RSPSAG 350 R PSAG Sbjct 360 RPPSAG 365 >gi|254231975|ref|ZP_04925302.1| PPE family protein [Mycobacterium tuberculosis C] gi|124601034|gb|EAY60044.1| PPE family protein [Mycobacterium tuberculosis C] Length=365 Score = 478 bits (1231), Expect = 5e-133, Method: Compositional matrix adjust. Identities = 303/366 (83%), Positives = 314/366 (86%), Gaps = 17/366 (4%) Query 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA Sbjct 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 Query 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL Sbjct 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 Query 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSA--- 177 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSA Sbjct 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 Query 178 ----------GVVAQ--AVASVSWPNPNDWWLVRLLGSITPTERTTIVRLLGQSYLATGM 225 G++ + + ASVSW NPNDWWLVRLLGSITPTERTTIVRLLGQSY ATGM Sbjct 181 AQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSYFATGM 240 Query 226 ARFLTSIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGAGPAVSASLARAEPVGRLSVPPSW 285 A+F SIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGA AVS SLARA +G LSVPPSW Sbjct 241 AQFFASIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVSVSLARANKIGALSVPPSW 300 Query 286 AVAAPAFAEKPEAGTPMSVIGEASSCGQGGLLRGIPL-ARAGRRTGAFAHRYGFRHSVIT 344 V A E P A + SS G GLLRG+PL +R RR+GAFAHRYGFRHSV+ Sbjct 301 -VKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVA 359 Query 345 RSPSAG 350 R PSAG Sbjct 360 RPPSAG 365 >gi|148661594|ref|YP_001283117.1| PPE family protein [Mycobacterium tuberculosis H37Ra] gi|148505746|gb|ABQ73555.1| PPE family protein [Mycobacterium tuberculosis H37Ra] Length=405 Score = 478 bits (1230), Expect = 6e-133, Method: Compositional matrix adjust. Identities = 303/366 (83%), Positives = 315/366 (87%), Gaps = 17/366 (4%) Query 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 +DFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA Sbjct 41 LDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 100 Query 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL Sbjct 101 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 160 Query 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSA--- 177 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSA Sbjct 161 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 220 Query 178 ----------GVVAQ--AVASVSWPNPNDWWLVRLLGSITPTERTTIVRLLGQSYLATGM 225 G++ + + ASVSW NPNDWWLVRLLGSITPTERTTIVRLLGQSY ATGM Sbjct 221 AQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSYFATGM 280 Query 226 ARFLTSIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGAGPAVSASLARAEPVGRLSVPPSW 285 A+F SIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGA AVSASLARA +G LSVPPSW Sbjct 281 AQFFASIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSW 340 Query 286 AVAAPAFAEKPEAGTPMSVIGEASSCGQGGLLRGIPL-ARAGRRTGAFAHRYGFRHSVIT 344 V A E P A + SS G GLLRG+PL +R RR+GAFAHRYGFRHSV+ Sbjct 341 -VKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVA 399 Query 345 RSPSAG 350 R PSAG Sbjct 400 RPPSAG 405 >gi|289569852|ref|ZP_06450079.1| PPE family protein [Mycobacterium tuberculosis T17] gi|289543606|gb|EFD47254.1| PPE family protein [Mycobacterium tuberculosis T17] Length=365 Score = 477 bits (1227), Expect = 1e-132, Method: Compositional matrix adjust. Identities = 302/366 (83%), Positives = 315/366 (87%), Gaps = 17/366 (4%) Query 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA Sbjct 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 Query 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL Sbjct 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 Query 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSA--- 177 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSA Sbjct 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 Query 178 ----------GVVAQ--AVASVSWPNPNDWWLVRLLGSITPTERTTIVRLLGQSYLATGM 225 G++ + + ASVSW +PNDWW+VRLLGSITPTERTTIVRLLGQSY ATGM Sbjct 181 AQVAAVAAMPGLLQRLSSAASVSWSHPNDWWIVRLLGSITPTERTTIVRLLGQSYFATGM 240 Query 226 ARFLTSIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGAGPAVSASLARAEPVGRLSVPPSW 285 A+F SIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGA AVSASLARA +G LSVPPSW Sbjct 241 AQFFASIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSW 300 Query 286 AVAAPAFAEKPEAGTPMSVIGEASSCGQGGLLRGIPL-ARAGRRTGAFAHRYGFRHSVIT 344 V A E P A + SS G GLLRG+PL +R RR+GAFAHRYGFRHSV+ Sbjct 301 -VKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVA 359 Query 345 RSPSAG 350 R PSAG Sbjct 360 RPPSAG 365 >gi|254364619|ref|ZP_04980665.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem] gi|134150133|gb|EBA42178.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem] Length=371 Score = 476 bits (1226), Expect = 2e-132, Method: Compositional matrix adjust. Identities = 302/366 (83%), Positives = 314/366 (86%), Gaps = 17/366 (4%) Query 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 +DFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA Sbjct 7 LDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 66 Query 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL Sbjct 67 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 126 Query 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSA--- 177 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSA Sbjct 127 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 186 Query 178 ----------GVVAQ--AVASVSWPNPNDWWLVRLLGSITPTERTTIVRLLGQSYLATGM 225 G++ + + ASVSW NPNDWWLVRLLGSITPTERTTIVRLLGQSY ATGM Sbjct 187 AQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSYFATGM 246 Query 226 ARFLTSIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGAGPAVSASLARAEPVGRLSVPPSW 285 A+F SIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGA AVS SLARA +G LSVPPSW Sbjct 247 AQFFASIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVSVSLARANKIGALSVPPSW 306 Query 286 AVAAPAFAEKPEAGTPMSVIGEASSCGQGGLLRGIPL-ARAGRRTGAFAHRYGFRHSVIT 344 V A E P A + SS G GLLRG+PL +R RR+GAFAHRYGFRHSV+ Sbjct 307 -VKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVA 365 Query 345 RSPSAG 350 R PSAG Sbjct 366 RPPSAG 371 >gi|15841255|ref|NP_336292.1| PPE family protein [Mycobacterium tuberculosis CDC1551] gi|13881482|gb|AAK46106.1| PPE family protein [Mycobacterium tuberculosis CDC1551] Length=405 Score = 476 bits (1226), Expect = 2e-132, Method: Compositional matrix adjust. Identities = 302/366 (83%), Positives = 314/366 (86%), Gaps = 17/366 (4%) Query 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 +DFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA Sbjct 41 LDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 100 Query 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL Sbjct 101 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 160 Query 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSA--- 177 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSA Sbjct 161 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 220 Query 178 ----------GVVAQ--AVASVSWPNPNDWWLVRLLGSITPTERTTIVRLLGQSYLATGM 225 G++ + + ASVSW NPNDWWLVRLLGSITPTERTTIVRLLGQSY ATGM Sbjct 221 AQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSYFATGM 280 Query 226 ARFLTSIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGAGPAVSASLARAEPVGRLSVPPSW 285 A+F SIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGA AVS SLARA +G LSVPPSW Sbjct 281 AQFFASIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVSVSLARANKIGALSVPPSW 340 Query 286 AVAAPAFAEKPEAGTPMSVIGEASSCGQGGLLRGIPL-ARAGRRTGAFAHRYGFRHSVIT 344 V A E P A + SS G GLLRG+PL +R RR+GAFAHRYGFRHSV+ Sbjct 341 -VKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVA 399 Query 345 RSPSAG 350 R PSAG Sbjct 400 RPPSAG 405 >gi|31792975|ref|NP_855468.1| PPE family protein [Mycobacterium bovis AF2122/97] gi|121637688|ref|YP_977911.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224990172|ref|YP_002644859.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|31618566|emb|CAD94518.1| PPE FAMILY PROTEIN [Mycobacterium bovis AF2122/97] gi|121493335|emb|CAL71806.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224773285|dbj|BAH26091.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|341601715|emb|CCC64388.1| PPE family protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=364 Score = 474 bits (1220), Expect = 1e-131, Method: Compositional matrix adjust. Identities = 304/366 (84%), Positives = 315/366 (87%), Gaps = 18/366 (4%) Query 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA Sbjct 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 Query 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL Sbjct 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 Query 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSA--- 177 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSA Sbjct 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 Query 178 ----------GVVAQ--AVASVSWPNPNDWWLVRLLGSITPTERTTIVRLLGQSYLATGM 225 G++ + + ASVSW NPNDWWLVRLLGSITPTERTTIVRLLGQSY ATGM Sbjct 181 AQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSYFATGM 240 Query 226 ARFLTSIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGAGPAVSASLARAEPVGRLSVPPSW 285 A+F SIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGA AVSASLARA +G LSVPPSW Sbjct 241 AQFFASIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSW 300 Query 286 AVAAPAFAEKPEAGTPMSVIGEASSCGQGGLLRGIPL-ARAGRRTGAFAHRYGFRHSVIT 344 V A E P A + SS G GLLRG+PL +R RR+GAFAHRYGFRHSV+ Sbjct 301 -VKTTALTE-PGAHAVSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVA 358 Query 345 RSPSAG 350 R PSAG Sbjct 359 RPPSAG 364 >gi|313658666|ref|ZP_07815546.1| PPE family protein [Mycobacterium tuberculosis KZN V2475] Length=351 Score = 456 bits (1174), Expect = 2e-126, Method: Compositional matrix adjust. Identities = 294/352 (84%), Positives = 304/352 (87%), Gaps = 17/352 (4%) Query 15 MYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGAASLSMVAAATPYVA 74 MYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGAASLSMVAAATPYVA Sbjct 1 MYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGAASLSMVAAATPYVA 60 Query 75 WLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTLIATNFFGQNSAAIA 134 WLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTLIATNFFGQNSAAIA Sbjct 61 WLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTLIATNFFGQNSAAIA 120 Query 135 VAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSA-------------GVVA 181 VAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSA G++ Sbjct 121 VAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVVAQVAAVAAMPGLLQ 180 Query 182 Q--AVASVSWPNPNDWWLVRLLGSITPTERTTIVRLLGQSYLATGMARFLTSIAQQLTFG 239 + + ASVSW NPNDWWLVRLLGSITPTERTTIVRLLGQSYLATGMARFLTSIAQQLTFG Sbjct 181 RLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSYLATGMARFLTSIAQQLTFG 240 Query 240 PGGTTAGSGGAWYPTPQFAGLGAGPAVSASLARAEPVGRLSVPPSWAVAAPAFAEKPEAG 299 PGGTTAGSGGAWYPTPQFAGLGA AVSASLARA +G LSVPPSW V A E P A Sbjct 241 PGGTTAGSGGAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSW-VKTTALTESPVAH 299 Query 300 TPMSVIGEASSCGQGGLLRGIPL-ARAGRRTGAFAHRYGFRHSVITRSPSAG 350 + SS G GLLRG+PL +R RR+GAFAHRYGFRHSV+ R PSAG Sbjct 300 AVSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVARPPSAG 351 >gi|289447405|ref|ZP_06437149.1| PPE family protein [Mycobacterium tuberculosis CPHL_A] gi|289420363|gb|EFD17564.1| PPE family protein [Mycobacterium tuberculosis CPHL_A] Length=334 Score = 456 bits (1172), Expect = 3e-126, Method: Compositional matrix adjust. Identities = 250/250 (100%), Positives = 250/250 (100%), Gaps = 0/250 (0%) Query 101 FVMTVPPPVITANRVLVMTLIATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASAS 160 FVMTVPPPVITANRVLVMTLIATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASAS Sbjct 85 FVMTVPPPVITANRVLVMTLIATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASAS 144 Query 161 ASRLIPFAAPPKTTNSAGVVAQAVASVSWPNPNDWWLVRLLGSITPTERTTIVRLLGQSY 220 ASRLIPFAAPPKTTNSAGVVAQAVASVSWPNPNDWWLVRLLGSITPTERTTIVRLLGQSY Sbjct 145 ASRLIPFAAPPKTTNSAGVVAQAVASVSWPNPNDWWLVRLLGSITPTERTTIVRLLGQSY 204 Query 221 LATGMARFLTSIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGAGPAVSASLARAEPVGRLS 280 LATGMARFLTSIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGAGPAVSASLARAEPVGRLS Sbjct 205 LATGMARFLTSIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGAGPAVSASLARAEPVGRLS 264 Query 281 VPPSWAVAAPAFAEKPEAGTPMSVIGEASSCGQGGLLRGIPLARAGRRTGAFAHRYGFRH 340 VPPSWAVAAPAFAEKPEAGTPMSVIGEASSCGQGGLLRGIPLARAGRRTGAFAHRYGFRH Sbjct 265 VPPSWAVAAPAFAEKPEAGTPMSVIGEASSCGQGGLLRGIPLARAGRRTGAFAHRYGFRH 324 Query 341 SVITRSPSAG 350 SVITRSPSAG Sbjct 325 SVITRSPSAG 334 >gi|167967964|ref|ZP_02550241.1| PPE family protein [Mycobacterium tuberculosis H37Ra] Length=351 Score = 449 bits (1155), Expect = 3e-124, Method: Compositional matrix adjust. Identities = 290/352 (83%), Positives = 301/352 (86%), Gaps = 17/352 (4%) Query 15 MYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGAASLSMVAAATPYVA 74 MYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGAASLSMVAAATPYVA Sbjct 1 MYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGAASLSMVAAATPYVA 60 Query 75 WLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTLIATNFFGQNSAAIA 134 WLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTLIATNFFGQNSAAIA Sbjct 61 WLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTLIATNFFGQNSAAIA 120 Query 135 VAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSA-------------GVVA 181 VAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSA G++ Sbjct 121 VAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVVAQVAAVAAMPGLLQ 180 Query 182 Q--AVASVSWPNPNDWWLVRLLGSITPTERTTIVRLLGQSYLATGMARFLTSIAQQLTFG 239 + + ASVSW NPNDWWLVRLLGSITPTERTTIVRLLGQSY ATGMA+F SIAQQLTFG Sbjct 181 RLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSYFATGMAQFFASIAQQLTFG 240 Query 240 PGGTTAGSGGAWYPTPQFAGLGAGPAVSASLARAEPVGRLSVPPSWAVAAPAFAEKPEAG 299 PGGTTAGSGGAWYPTPQFAGLGA AVSASLARA +G LSVPPSW V A E P A Sbjct 241 PGGTTAGSGGAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSW-VKTTALTESPVAH 299 Query 300 TPMSVIGEASSCGQGGLLRGIPL-ARAGRRTGAFAHRYGFRHSVITRSPSAG 350 + SS G GLLRG+PL +R RR+GAFAHRYGFRHSV+ R PSAG Sbjct 300 AVSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVARPPSAG 351 >gi|254550794|ref|ZP_05141241.1| PPE family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] Length=351 Score = 448 bits (1152), Expect = 7e-124, Method: Compositional matrix adjust. Identities = 289/352 (83%), Positives = 300/352 (86%), Gaps = 17/352 (4%) Query 15 MYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGAASLSMVAAATPYVA 74 MYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTG PWVGAASLSMVAAATPYVA Sbjct 1 MYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGVPWVGAASLSMVAAATPYVA 60 Query 75 WLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTLIATNFFGQNSAAIA 134 WLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTLIATNFFGQNSAAIA Sbjct 61 WLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTLIATNFFGQNSAAIA 120 Query 135 VAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSA-------------GVVA 181 VAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSA G++ Sbjct 121 VAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVVAQVAAVAAMPGLLQ 180 Query 182 Q--AVASVSWPNPNDWWLVRLLGSITPTERTTIVRLLGQSYLATGMARFLTSIAQQLTFG 239 + + ASVSW NPNDWWLVRLLGSITPTERTTIVRLLGQSY ATGMA+F SIAQQLTFG Sbjct 181 RLSSAASVSWSNPNDWWLVRLLGSITPTERTTIVRLLGQSYFATGMAQFFASIAQQLTFG 240 Query 240 PGGTTAGSGGAWYPTPQFAGLGAGPAVSASLARAEPVGRLSVPPSWAVAAPAFAEKPEAG 299 PGGTTAGSGGAWYPTPQFAGLGA AVSASLARA +G LSVPPSW V A E P A Sbjct 241 PGGTTAGSGGAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSW-VKTTALTESPVAH 299 Query 300 TPMSVIGEASSCGQGGLLRGIPL-ARAGRRTGAFAHRYGFRHSVITRSPSAG 350 + SS G GLLRG+PL +R RR+GAFAHRYGFRHSV+ R PSAG Sbjct 300 AVSANPTVGSSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVARPPSAG 351 >gi|308379035|ref|ZP_07484774.2| putative PPE family protein [Mycobacterium tuberculosis SUMu010] gi|308358415|gb|EFP47266.1| putative PPE family protein [Mycobacterium tuberculosis SUMu010] Length=342 Score = 429 bits (1102), Expect = 4e-118, Method: Compositional matrix adjust. Identities = 281/343 (82%), Positives = 292/343 (86%), Gaps = 17/343 (4%) Query 24 MLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGAASLSMVAAATPYVAWLSQAAARA 83 MLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGAASLSMVAAATPYVAWLSQAAARA Sbjct 1 MLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGAASLSMVAAATPYVAWLSQAAARA 60 Query 84 EQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTLIATNFFGQNSAAIAVAEAQYAEM 143 EQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTLIATNFFGQNSAAIAVAEAQYAEM Sbjct 61 EQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTLIATNFFGQNSAAIAVAEAQYAEM 120 Query 144 WAQDAVAMYGYAAASASASRLIPFAAPPKTTNSA-------------GVVAQ--AVASVS 188 WAQDAVAMYGYAAASASASRLIPFAAPPKTTNSA G++ + + ASVS Sbjct 121 WAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVVAQVAAVAAMPGLLQRLSSAASVS 180 Query 189 WPNPNDWWLVRLLGSITPTERTTIVRLLGQSYLATGMARFLTSIAQQLTFGPGGTTAGSG 248 W NPNDWWLVRLLGSITPTERTTIVRLLGQSY ATGMA+F SIAQQLTFGPGGTTAGSG Sbjct 181 WSNPNDWWLVRLLGSITPTERTTIVRLLGQSYFATGMAQFFASIAQQLTFGPGGTTAGSG 240 Query 249 GAWYPTPQFAGLGAGPAVSASLARAEPVGRLSVPPSWAVAAPAFAEKPEAGTPMSVIGEA 308 GAWYPTPQFAGLGA AVSASLARA +G LSVPPSW V A E P A + Sbjct 241 GAWYPTPQFAGLGASRAVSASLARANKIGALSVPPSW-VKTTALTESPVAHAVSANPTVG 299 Query 309 SSCGQGGLLRGIPL-ARAGRRTGAFAHRYGFRHSVITRSPSAG 350 SS G GLLRG+PL +R RR+GAFAHRYGFRHSV+ R PSAG Sbjct 300 SSHGPHGLLRGLPLGSRITRRSGAFAHRYGFRHSVVARPPSAG 342 >gi|307079822|ref|ZP_07488992.1| putative PPE family protein [Mycobacterium tuberculosis SUMu011] gi|308362342|gb|EFP51193.1| putative PPE family protein [Mycobacterium tuberculosis SUMu011] Length=323 Score = 402 bits (1034), Expect = 4e-110, Method: Compositional matrix adjust. Identities = 262/324 (81%), Positives = 273/324 (85%), Gaps = 17/324 (5%) Query 43 TGYASVIAELTGAPWVGAASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFV 102 TGYASVIAELTGAPWVGAASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFV Sbjct 1 TGYASVIAELTGAPWVGAASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFV 60 Query 103 MTVPPPVITANRVLVMTLIATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASAS 162 MTVPPPVITANRVLVMTLIATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASAS Sbjct 61 MTVPPPVITANRVLVMTLIATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASAS 120 Query 163 RLIPFAAPPKTTNSA-------------GVVAQ--AVASVSWPNPNDWWLVRLLGSITPT 207 RLIPFAAPPKTTNSA G++ + + ASVSW NPNDWWLVRLLGSITPT Sbjct 121 RLIPFAAPPKTTNSAGVVAQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPT 180 Query 208 ERTTIVRLLGQSYLATGMARFLTSIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGAGPAVS 267 ERTTIVRLLGQSY ATGMA+F SIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGA AVS Sbjct 181 ERTTIVRLLGQSYFATGMAQFFASIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVS 240 Query 268 ASLARAEPVGRLSVPPSWAVAAPAFAEKPEAGTPMSVIGEASSCGQGGLLRGIPL-ARAG 326 ASLARA +G LSVPPSW V A E P A + SS G GLLRG+PL +R Sbjct 241 ASLARANKIGALSVPPSW-VKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRIT 299 Query 327 RRTGAFAHRYGFRHSVITRSPSAG 350 RR+GAFAHRYGFRHSV+ R PSAG Sbjct 300 RRSGAFAHRYGFRHSVVARPPSAG 323 >gi|323719696|gb|EGB28816.1| PPE family protein [Mycobacterium tuberculosis CDC1551A] Length=318 Score = 390 bits (1003), Expect = 1e-106, Method: Compositional matrix adjust. Identities = 255/319 (80%), Positives = 267/319 (84%), Gaps = 17/319 (5%) Query 48 VIAELTGAPWVGAASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPP 107 +IAELTGAPWVGAASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPP Sbjct 1 MIAELTGAPWVGAASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPP 60 Query 108 PVITANRVLVMTLIATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPF 167 PVITANRVLVMTLIATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPF Sbjct 61 PVITANRVLVMTLIATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPF 120 Query 168 AAPPKTTNSA-------------GVVAQ--AVASVSWPNPNDWWLVRLLGSITPTERTTI 212 AAPPKTTNSA G++ + + ASVSW NPNDWWLVRLLGSITPTERTTI Sbjct 121 AAPPKTTNSAGVVAQVAAVAAMPGLLQRLSSAASVSWSNPNDWWLVRLLGSITPTERTTI 180 Query 213 VRLLGQSYLATGMARFLTSIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGAGPAVSASLAR 272 VRLLGQSY ATGMA+F SIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGA AVS SLAR Sbjct 181 VRLLGQSYFATGMAQFFASIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRAVSVSLAR 240 Query 273 AEPVGRLSVPPSWAVAAPAFAEKPEAGTPMSVIGEASSCGQGGLLRGIPL-ARAGRRTGA 331 A +G LSVPPSW V A E P A + SS G GLLRG+PL +R RR+GA Sbjct 241 ANKIGALSVPPSW-VKTTALTESPVAHAVSANPTVGSSHGPHGLLRGLPLGSRITRRSGA 299 Query 332 FAHRYGFRHSVITRSPSAG 350 FAHRYGFRHSV+ R PSAG Sbjct 300 FAHRYGFRHSVVARPPSAG 318 >gi|306972073|ref|ZP_07484734.1| putative PPE family protein [Mycobacterium tuberculosis SUMu010] gi|308358453|gb|EFP47304.1| putative PPE family protein [Mycobacterium tuberculosis SUMu010] Length=179 Score = 341 bits (875), Expect = 9e-92, Method: Compositional matrix adjust. Identities = 179/179 (100%), Positives = 179/179 (100%), Gaps = 0/179 (0%) Query 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA Sbjct 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 Query 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL Sbjct 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 Query 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGV 179 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGV Sbjct 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGV 179 >gi|306775987|ref|ZP_07414324.1| putative PPE family protein [Mycobacterium tuberculosis SUMu001] gi|308215557|gb|EFO74956.1| putative PPE family protein [Mycobacterium tuberculosis SUMu001] Length=174 Score = 330 bits (845), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 174/174 (100%), Positives = 174/174 (100%), Gaps = 0/174 (0%) Query 7 PPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGAASLSMV 66 PPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGAASLSMV Sbjct 1 PPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGAASLSMV 60 Query 67 AAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTLIATNFF 126 AAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTLIATNFF Sbjct 61 AAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTLIATNFF 120 Query 127 GQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 GQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV Sbjct 121 GQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 174 >gi|323719699|gb|EGB28819.1| PPE family protein [Mycobacterium tuberculosis CDC1551A] Length=186 Score = 329 bits (844), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 173/173 (100%), Positives = 173/173 (100%), Gaps = 0/173 (0%) Query 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA Sbjct 14 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 73 Query 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL Sbjct 74 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 133 Query 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKT 173 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKT Sbjct 134 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKT 186 >gi|307079781|ref|ZP_07488951.1| putative PPE family protein [Mycobacterium tuberculosis SUMu011] gi|308362377|gb|EFP51228.1| putative PPE family protein [Mycobacterium tuberculosis SUMu011] Length=170 Score = 318 bits (816), Expect = 7e-85, Method: Compositional matrix adjust. Identities = 169/170 (99%), Positives = 170/170 (100%), Gaps = 0/170 (0%) Query 12 SGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGAASLSMVAAATP 71 SGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGAASLSMVAAATP Sbjct 1 SGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGAASLSMVAAATP 60 Query 72 YVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTLIATNFFGQNSA 131 YVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTLIATNFFGQNSA Sbjct 61 YVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTLIATNFFGQNSA 120 Query 132 AIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVVA 181 AIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPK+TNSAGVVA Sbjct 121 AIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKSTNSAGVVA 170 >gi|323719408|gb|EGB28541.1| PPE family protein [Mycobacterium tuberculosis CDC1551A] Length=166 Score = 312 bits (799), Expect = 5e-83, Method: Compositional matrix adjust. Identities = 166/166 (100%), Positives = 166/166 (100%), Gaps = 0/166 (0%) Query 15 MYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGAASLSMVAAATPYVA 74 MYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGAASLSMVAAATPYVA Sbjct 1 MYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGAASLSMVAAATPYVA 60 Query 75 WLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTLIATNFFGQNSAAIA 134 WLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTLIATNFFGQNSAAIA Sbjct 61 WLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTLIATNFFGQNSAAIA 120 Query 135 VAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 VAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV Sbjct 121 VAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 166 >gi|342861307|ref|ZP_08717955.1| PPE family protein [Mycobacterium colombiense CECT 3035] gi|342131207|gb|EGT84488.1| PPE family protein [Mycobacterium colombiense CECT 3035] Length=417 Score = 294 bits (753), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 212/417 (51%), Positives = 253/417 (61%), Gaps = 67/417 (16%) Query 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 MDFGALPPEINSGRMY GPGSGPM+AAAAAWDG+ EL AA+GY SVI+ELT APWVG Sbjct 1 MDFGALPPEINSGRMYAGPGSGPMMAAAAAWDGLGAELSSAASGYTSVISELTHAPWVGP 60 Query 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 AS SM++A TPYV+WLS AA+AE+ QA AAAAA+EAAF MTVPPPVI ANRVL+ L Sbjct 61 ASSSMLSAVTPYVSWLSVLAAQAEETAGQARAAAAAFEAAFAMTVPPPVIAANRVLLANL 120 Query 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTT------ 174 +ATNF GQN+ AIA EAQY EMWAQDA AMYGYA +SA AS L P +PP TT Sbjct 121 VATNFLGQNTPAIAATEAQYMEMWAQDAAAMYGYAGSSAVASELPPLTSPPNTTTPEADS 180 Query 175 -----------NSAGVVAQAVASVSWPN---------------------PNDW-WLVRLL 201 AG AQ + ++ P P + WL L+ Sbjct 181 DQAAAVAKAVAEPAGNTAQTTSQLATPQALSAGATQAVTQASTTTTATQPGPFTWLQNLI 240 Query 202 GSI------TPTER----------TTIVRLLGQSYLATGMARFLTSIAQQLTFGPGGTTA 245 TPT T + + G +Y +TG+ F +SIAQQLTFGPGGTTA Sbjct 241 NGFLTSGLPTPTNNYAGLNTGMYGTLLKQTTGLAYFSTGITSFWSSIAQQLTFGPGGTTA 300 Query 246 GSGGAWYPTPQFAGLGAGP--------AVSASLARAEPVGRLSVPPSWAVAAPAF--AEK 295 G+GGAW+PTPQFA LG G AVSA + +A VG LSVP WA + A Sbjct 301 GAGGAWFPTPQFASLGLGNLGGVGHVGAVSAGVGQAGRVGMLSVPQHWATLTSSVSPAAL 360 Query 296 PEAGTPMSVIGEASSCGQGGLLRGIPLARAGRRTGA--FAHRYGFRHSVITRSPSAG 350 E TP+ ++ GLLRG+P+ GRR A + ++YGFR+SV+TR PSAG Sbjct 361 SEEATPIQAAAGGANSPANGLLRGMPVGSIGRRGAAAGYVNKYGFRYSVLTRPPSAG 417 >gi|296164778|ref|ZP_06847340.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295899879|gb|EFG79323.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=411 Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 205/418 (50%), Positives = 245/418 (59%), Gaps = 76/418 (18%) Query 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 DFGALPPEINSGRMY GPGSGPM+ AAAAWD +A ELG AA+GY S+I ELT PWVG Sbjct 2 FDFGALPPEINSGRMYAGPGSGPMMVAAAAWDVLAAELGTAASGYNSIIDELTNGPWVGP 61 Query 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 AS SM+AA TPYV+WL+ A +AE+ A AAAAA+EAAF MTVPPPVI ANRVL+ TL Sbjct 62 ASTSMIAAVTPYVSWLTTIAGQAEETAGHARAAAAAFEAAFAMTVPPPVIAANRVLLATL 121 Query 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPK-------- 172 +ATNFFGQN+ AI EAQY EMWAQDA AMYGYAA+S +AS++ PF+A P+ Sbjct 122 VATNFFGQNTPAIMATEAQYMEMWAQDAAAMYGYAASSTTASQMTPFSAAPQTTTPDGES 181 Query 173 ---------TTNSAGVVAQAVASVS----------------------------------- 188 TT AG AQ V++ S Sbjct 182 QQFAAVTQATTQQAGNTAQTVSNTSSQLATPQVLSATAPQTAQQVITAGTAPTTGSVQDV 241 Query 189 WPNPNDWWLVRLLGSITPTERTTIVRLLGQSYLATGMARFLTSIAQQLTFGPGGTTAGSG 248 P+P +WW S+TP T I++ Q+Y G+ F SI QQLTFGPGG+T GS Sbjct 242 LPSPTNWW------SLTPGNYTAIIKQTLQAYFGVGIGNFGWSIGQQLTFGPGGSTVGSA 295 Query 249 GAWYPTPQFA---------GLGAGPAVSASLARAEPVGRLSVPPSWAVAA----PAFAEK 295 G W+PTPQFA AG AV+A +A VG LSVP WA A PA A Sbjct 296 GTWFPTPQFAQLGLGNLGSLGNAGGAVTAGAGQAAQVGGLSVPQQWATLASSVSPAEATD 355 Query 296 PEAGTPMSVIGEASSCGQGGLLRGIPL---ARAGRRTGAFAHRYGFRHSVITRSPSAG 350 EA P+ + +S G LLRG+P R + H+YGFR+SV+TR PSAG Sbjct 356 VEAA-PIQTVSASSPPGN-ALLRGMPTGAMGRRAGAAAGYTHKYGFRYSVLTRPPSAG 411 >gi|240172020|ref|ZP_04750679.1| PPE family protein [Mycobacterium kansasii ATCC 12478] Length=378 Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 219/380 (58%), Positives = 251/380 (67%), Gaps = 46/380 (12%) Query 15 MYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGAASLSMVAAATPYVA 74 MY GPGSG M+AAAAAWD +A EL AA+GY SVIAELTG+PW+G ASLSMVAAA PY+A Sbjct 1 MYAGPGSGSMMAAAAAWDDLAAELASAASGYESVIAELTGSPWMGPASLSMVAAARPYIA 60 Query 75 WLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTLIATNFFGQNSAAIA 134 WLS A+A AEQAGMQ AAAAAYE AFVMTVPPP I ANR+L+MTLIATNFFGQN+ AIA Sbjct 61 WLSGASALAEQAGMQGRAAAAAYETAFVMTVPPPAIAANRLLLMTLIATNFFGQNTPAIA 120 Query 135 VAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGV--------------- 179 EA YAEMWAQDA AMYGYA ASA+AS L PFA P TT+ AG+ Sbjct 121 ATEAHYAEMWAQDAAAMYGYAGASATASELTPFADPGTTTDPAGLAAQSAAVAKAAATPA 180 Query 180 -------------------VAQAVASVSWP------NPNDWWLVRLLGSITPTERTTIVR 214 V Q + +S NPNDWW+V+ LGSI +R ++VR Sbjct 181 GTSAPALSSADPGLVSTAAVPQLLQQLSTSTLAGSLNPNDWWIVQTLGSINSAQRVSVVR 240 Query 215 LLGQSYLATGMARFLTSIAQQLTFGPGGTTAGSGGAWYPTPQF---AGLGAGPAVSASLA 271 LG SY A G+ +F+ SI QQLTFG GTTAGSGGAWY TPQF A SASLA Sbjct 241 TLGLSYFAMGIPQFIASIGQQLTFG-SGTTAGSGGAWYATPQFAGLGTGAGRAAASASLA 299 Query 272 RAEPVGRLSVPPSWAVAAPAFAEKPEAGTPMSVIGEASSCGQGGLLRGIPL-ARAGRRTG 330 A +G LSVPP+W V + A E+ AG + +G S G GLLRGIPL + A RR G Sbjct 300 SANKIGALSVPPTW-VGSSAEVERAAAGLVSADVGTNSQGGVQGLLRGIPLGSGAARRGG 358 Query 331 AFAHRYGFRHSVITRSPSAG 350 HRYGFR+SV+TR PSAG Sbjct 359 GIGHRYGFRYSVLTRPPSAG 378 >gi|183981918|ref|YP_001850209.1| PPE family protein [Mycobacterium marinum M] gi|183175244|gb|ACC40354.1| PPE family protein [Mycobacterium marinum M] Length=391 Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 197/389 (51%), Positives = 232/389 (60%), Gaps = 42/389 (10%) Query 2 DFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGAA 61 D+GA PPEINS MY GPGS MLAAAAAWD VA ELG+ A+GY SVI+ELT PWVG A Sbjct 5 DYGARPPEINSALMYFGPGSRSMLAAAAAWDAVAFELGVLASGYTSVISELTSGPWVGPA 64 Query 62 SLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTLI 121 + SMV A+ PYVAWL +A RAE+ QA +AAAAYEAAFVMTVPPPV+ ANRVL+ TLI Sbjct 65 AASMVGASAPYVAWLRASAIRAERTASQARSAAAAYEAAFVMTVPPPVVAANRVLLTTLI 124 Query 122 ATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVVA 181 TNFFGQN+ AIAV EAQYAEMWAQDA AMYGYAA+SA+A+RL PF PP TTN G + Sbjct 125 VTNFFGQNTPAIAVTEAQYAEMWAQDAAAMYGYAASSATATRLTPFVPPPATTNLPGPLW 184 Query 182 QAVAS----------------------VSWPNPNDW--WLVRLLGSITPTERTTIVRLLG 217 QA A V+ P WL L ITP ERTT+VRLLG Sbjct 185 QASAMGKAATTTAVAGGSTLLAATRRPVALPRLAALAQWLEAHLPGITPAERTTVVRLLG 244 Query 218 QSYLATGMARFLTSIAQQLTFGP---------------GGTTAGS-GGAWYPTPQFAGLG 261 QSY A GM +F TSIA Q G G G+ GGA + G Sbjct 245 QSYFALGMVQFSTSIALQAIPGTASGAGASGSSVVDNWGSMLHGAHGGATAEFEEDLGTL 304 Query 262 AGPAVSASLARAEPVGRLSVPPSWAVAAPAFAEKPEAGTPMSVIGEASSCGQGGLLRGIP 321 P VSA++ +A G LS P SW FA A + + G +S L+G+P Sbjct 305 TRP-VSAAMGKARLTGSLSTPSSWGAGVREFANA-AADEQLDLAGSVASAKSNAYLQGMP 362 Query 322 LARAGRRTGAFAHRYGFRHSVITRSPSAG 350 + AGR T +YGFR+ V+ R+P+ G Sbjct 363 MTAAGRNTAVAEQKYGFRYRVMQRTPAGG 391 >gi|118617688|ref|YP_906020.1| PPE family protein [Mycobacterium ulcerans Agy99] gi|118569798|gb|ABL04549.1| PPE family protein [Mycobacterium ulcerans Agy99] Length=391 Score = 278 bits (710), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 197/389 (51%), Positives = 232/389 (60%), Gaps = 42/389 (10%) Query 2 DFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGAA 61 D+GA PPEINS MY GPGS MLAAAAAWD VA ELG+ A+GY SVI+ELT PWVG A Sbjct 5 DYGARPPEINSALMYFGPGSRSMLAAAAAWDAVAFELGVLASGYTSVISELTSGPWVGPA 64 Query 62 SLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTLI 121 + SMV A+ PYVAWL +A RAE+ QA +AAAAYEAAFVMTVPPPV+ ANRVL+ TLI Sbjct 65 AASMVGASAPYVAWLRASAIRAERTASQARSAAAAYEAAFVMTVPPPVVAANRVLLTTLI 124 Query 122 ATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVVA 181 TNFFGQN+ AIAV EAQYAEMWAQDA AMYGYAA+SA+A+RL PF PP TTN G + Sbjct 125 VTNFFGQNTPAIAVTEAQYAEMWAQDAAAMYGYAASSATATRLTPFVPPPATTNLPGPLW 184 Query 182 QAVAS----------------------VSWPNPNDW--WLVRLLGSITPTERTTIVRLLG 217 QA A V+ P WL L ITP ERTT+VRLLG Sbjct 185 QASAMGKAATTTAVAGGSTLLAATRRPVALPRLAALAQWLEAHLPGITPAERTTVVRLLG 244 Query 218 QSYLATGMARFLTSIAQQLTFGP---------------GGTTAGS-GGAWYPTPQFAGLG 261 QSY A GM +F TSIA Q G G G+ GGA + G Sbjct 245 QSYFALGMVQFSTSIALQAIPGTASGAGGSGSSVVDNWGSMLHGAHGGAAAEFEEDLGTL 304 Query 262 AGPAVSASLARAEPVGRLSVPPSWAVAAPAFAEKPEAGTPMSVIGEASSCGQGGLLRGIP 321 P VSA++ +A G LS P SW FA A + + G +S L+G+P Sbjct 305 TRP-VSAAMGKARLTGSLSTPSSWGAGVREFANA-AADEQLDLAGSVASAKSNAYLQGMP 362 Query 322 LARAGRRTGAFAHRYGFRHSVITRSPSAG 350 + AGR T +YGFR+ V+ R+P+ G Sbjct 363 MTAAGRNTAVAEQKYGFRYRVMQRTPAGG 391 >gi|212596596|gb|ACJ35591.1| PPE24 [Mycobacterium intracellulare ATCC 13950] Length=403 Score = 270 bits (689), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 209/403 (52%), Positives = 250/403 (63%), Gaps = 54/403 (13%) Query 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 +DFGALPPEINSGRMY GPGSGPM+AAAAAWD +A E+G+AA GY SV+ EL PWVG Sbjct 2 LDFGALPPEINSGRMYAGPGSGPMMAAAAAWDEIAAEVGVAANGYNSVVTELISGPWVGP 61 Query 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 AS+SM++A P+++WLS AA+AE+A Q AAAA+EAAF MTVPPPVI NRVL+ L Sbjct 62 ASISMISAIAPFISWLSAVAAQAEEAASQGRVAAAAFEAAFAMTVPPPVIAVNRVLLANL 121 Query 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTT------ 174 IATNFFGQN+ AIA EAQY EMWAQDAVAMYGYAA+SA AS L PFA PPKT+ Sbjct 122 IATNFFGQNTPAIAATEAQYMEMWAQDAVAMYGYAASSAMASELAPFAPPPKTSTPDASS 181 Query 175 -----------NSAGVVAQAVASVSWPN------------PNDWWLVRLLGSIT------ 205 AG AQ + V+ P P G+ T Sbjct 182 KQAAAVAKAVAEPAGNTAQNTSQVASPQALSLNASQATQAPTTATNAASTGTTTSLKNIF 241 Query 206 --PTERTTIV-RLLGQSYLATGMARFLTSIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGA 262 PT TI R G +Y + GM +F +SIAQQLTFGPGG+TAG+GGAW+PTPQFA LG Sbjct 242 GDPTFNDTIFKRTTGLAYFSNGMGQFASSIAQQLTFGPGGSTAGAGGAWFPTPQFANLGL 301 Query 263 GPA---------VSASLARAEPVGRLSVPPSWAV----AAPAFAEKPEAGTPMSVIGEAS 309 G V+AS +A +G LSVP WA PA EA TP+ + Sbjct 302 GNLGGGAGHLSGVTASAGQAARIGTLSVPQHWATLTSAVTPATVPDLEA-TPVQAAATGT 360 Query 310 SCGQGGLLRGIPLARAGRR--TGAFAHRYGFRHSVITRSPSAG 350 + GLLRG+P GRR G + ++YGFR+SV+TR PSAG Sbjct 361 TGPANGLLRGMPAGALGRRGAAGGYVNKYGFRYSVLTRPPSAG 403 >gi|15842434|ref|NP_337471.1| PPE family protein [Mycobacterium tuberculosis CDC1551] gi|31794068|ref|NP_856561.1| PPE family protein [Mycobacterium bovis AF2122/97] gi|57117034|ref|YP_177913.1| PPE family protein [Mycobacterium tuberculosis H37Rv] 28 more sequence titles Length=408 Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 206/412 (50%), Positives = 239/412 (59%), Gaps = 66/412 (16%) Query 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 MDFG LPPEINSGRMY GPGSGPM+AAAAAWD +A ELGLAA GY I+ELTGA W G Sbjct 1 MDFGVLPPEINSGRMYAGPGSGPMMAAAAAWDSLAAELGLAAGGYRLAISELTGAYWAGP 60 Query 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 A+ SMVAA TPYVAWLS A +AEQAGMQA AAAAAYE AF MTVPPPV+ ANR L++ L Sbjct 61 AAASMVAAVTPYVAWLSATAGQAEQAGMQARAAAAAYELAFAMTVPPPVVVANRALLVAL 120 Query 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 +ATNFFGQN+ AIA EAQYAEMWAQDA AMY YA ++A A+ L PF A P TT+ A + Sbjct 121 VATNFFGQNTPAIAATEAQYAEMWAQDAAAMYAYAGSAAIATELTPFTAAPVTTSPAALA 180 Query 181 AQAVASVS--------------------------WPNPNDWWLVRLLGSITPTERTTIVR 214 QA A+VS W + WL L +TP R TIVR Sbjct 181 GQAAATVSSTVPPLATTAAVPQLLQQLSSTSLIPWYSALQQWLAENLLGLTPDNRMTIVR 240 Query 215 LLGQSYLATGMARFLTSIAQQLTFG-PGGTTAGSGG-----AWYPTPQFAGLGAGP---- 264 LLG SY G+ +F S+AQQ G PGG AG G +W PT FAG A P Sbjct 241 LLGISYFDEGLLQFEASLAQQAIPGTPGG--AGDSGSSVLDSWGPT-IFAGPRASPSVAG 297 Query 265 -------------------------AVSASLARAEPVGRLSVPPSWAVAAPAFAEKPEAG 299 +VSA+L + G LSVPP WA A +A Sbjct 298 GGAVGGVQTPQPYWYWALDRESIGGSVSAALGKGSSAGSLSVPPDWAARA-RWANPAAWR 356 Query 300 TPMSVIGEASSCGQGGLLRGIPLARAGRRT-GAFAHRYGFRHSVITRSPSAG 350 P + + LLRG P+A AG+ T G F H+YGFR +V+ R P AG Sbjct 357 LPGDDVTALRGTAENALLRGFPMASAGQSTGGGFVHKYGFRLAVMQRPPFAG 408 >gi|340627882|ref|YP_004746334.1| PPE family protein [Mycobacterium canettii CIPT 140010059] gi|340006072|emb|CCC45244.1| PPE family protein [Mycobacterium canettii CIPT 140010059] Length=408 Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 206/412 (50%), Positives = 239/412 (59%), Gaps = 66/412 (16%) Query 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 MDFG LPPEINSGRMY GPGSGPM+AAAAAWD +A ELGLAA GY I+ELTGA WVG Sbjct 1 MDFGVLPPEINSGRMYAGPGSGPMMAAAAAWDSLAAELGLAAGGYRLAISELTGAYWVGP 60 Query 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 A+ SMVAA TPYVAWLS A +AEQAGMQA AAAAAYE AF MTVPPPV+ ANR L++ L Sbjct 61 AAASMVAAVTPYVAWLSATAGQAEQAGMQARAAAAAYELAFAMTVPPPVVVANRALLVAL 120 Query 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 +ATNFFGQN+ AIA EAQYAEMWAQDA AMY YA ++A A+ L PF P TT+ A + Sbjct 121 VATNFFGQNTPAIAATEAQYAEMWAQDAAAMYTYAGSAAIATELTPFTPAPVTTSPAALA 180 Query 181 AQAVASVS--------------------------WPNPNDWWLVRLLGSITPTERTTIVR 214 QA A+VS W + WL L +TP R TIVR Sbjct 181 GQAAATVSSTVPPVATTAAVPQLLQQLSSTSLIPWYSALQQWLAENLLGLTPDNRMTIVR 240 Query 215 LLGQSYLATGMARFLTSIAQQLTFG-PGGTTAGSGG-----AWYPTPQFAGLGAGP---- 264 LLG SY G+ +F S+AQQ G PGG AG G +W PT FAG A P Sbjct 241 LLGISYFDEGLLQFEASLAQQAIPGTPGG--AGDSGSSVLDSWGPT-IFAGPRASPSVAG 297 Query 265 -------------------------AVSASLARAEPVGRLSVPPSWAVAAPAFAEKPEAG 299 +VSA+L + G LSVPP WA A +A Sbjct 298 GGAVGGVQTPQPYWYWALDRESIGGSVSAALGKGSSAGSLSVPPDWAARA-RWANPAAWR 356 Query 300 TPMSVIGEASSCGQGGLLRGIPLARAGRRT-GAFAHRYGFRHSVITRSPSAG 350 P + + LLRG P+A AG+ T G F H+YGFR +V+ R P AG Sbjct 357 LPGDDVTALRGTAENALLRGFPMASAGQSTGGGFVHKYGFRLAVMQRPPFAG 408 >gi|298526361|ref|ZP_07013770.1| PPE family protein [Mycobacterium tuberculosis 94_M4241A] gi|298496155|gb|EFI31449.1| PPE family protein [Mycobacterium tuberculosis 94_M4241A] Length=408 Score = 262 bits (670), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 205/412 (50%), Positives = 238/412 (58%), Gaps = 66/412 (16%) Query 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 MDFG LPPEINSGRMY GPGSGPM+AAAAAWD +A ELGLAA GY I+ELTGA W G Sbjct 1 MDFGVLPPEINSGRMYAGPGSGPMMAAAAAWDSLAAELGLAAGGYRLAISELTGAYWAGP 60 Query 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 A+ SMVAA TPYVAWLS A +AEQAGMQA AAAAAYE AF MTVP PV+ ANR L++ L Sbjct 61 AAASMVAAVTPYVAWLSATAGQAEQAGMQARAAAAAYELAFAMTVPLPVVVANRALLVAL 120 Query 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTTNSAGVV 180 +ATNFFGQN+ AIA EAQYAEMWAQDA AMY YA ++A A+ L PF A P TT+ A + Sbjct 121 VATNFFGQNTPAIAATEAQYAEMWAQDAAAMYAYAGSAAIATELTPFTAAPVTTSPAALA 180 Query 181 AQAVASVS--------------------------WPNPNDWWLVRLLGSITPTERTTIVR 214 QA A+VS W + WL L +TP R TIVR Sbjct 181 GQAAATVSSTVPPLATTAAVPQLLQQLSSTSLIPWYSALQQWLAENLLGLTPDNRMTIVR 240 Query 215 LLGQSYLATGMARFLTSIAQQLTFG-PGGTTAGSGG-----AWYPTPQFAGLGAGP---- 264 LLG SY G+ +F S+AQQ G PGG AG G +W PT FAG A P Sbjct 241 LLGISYFDEGLLQFEASLAQQAIPGTPGG--AGDSGSSVLDSWGPT-IFAGPRASPSVAG 297 Query 265 -------------------------AVSASLARAEPVGRLSVPPSWAVAAPAFAEKPEAG 299 +VSA+L + G LSVPP WA A +A Sbjct 298 GGAVGGVQTPQPYWYWALDRESIGGSVSAALGKGSSAGSLSVPPDWAARA-RWANPAAWR 356 Query 300 TPMSVIGEASSCGQGGLLRGIPLARAGRRT-GAFAHRYGFRHSVITRSPSAG 350 P + + LLRG P+A AG+ T G F H+YGFR +V+ R P AG Sbjct 357 LPGDDVTALRGTAENALLRGFPMASAGQSTGGGFVHKYGFRLAVMQRPPFAG 408 >gi|254823004|ref|ZP_05228005.1| PPE family protein [Mycobacterium intracellulare ATCC 13950] Length=417 Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 209/423 (50%), Positives = 249/423 (59%), Gaps = 79/423 (18%) Query 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60 MDFGA PPEINSG MY GPGSG M+AAAAAWDG+ ELG AA+GYASVI+ELT A WVG Sbjct 1 MDFGAFPPEINSGLMYAGPGSGSMMAAAAAWDGLGAELGTAASGYASVISELTHALWVGP 60 Query 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANRVLVMTL 120 AS SM++A PYV WL AA+AE+ QA AAAAA+EAAF MTVPPPVI ANRVL+ L Sbjct 61 ASASMLSAVMPYVNWLGVLAAQAEETAGQARAAAAAFEAAFAMTVPPPVIAANRVLLANL 120 Query 121 IATNFFGQNSAAIAVAEAQYAEMWAQDAVAMYGYAAASASASRLIPFAAPPKTT------ 174 +ATNF GQN+ AIA EAQY EMWAQDA AMYGYA +S +AS L+PF APP TT Sbjct 121 VATNFLGQNTPAIAATEAQYMEMWAQDAGAMYGYAGSSLAASELVPFTAPPNTTAPDATG 180 Query 175 -----------NSAGVVAQAVASVSWPN-------------------------------- 191 AG AQ + ++ P+ Sbjct 181 DQAAAVAKAVAEPAGNTAQTTSQLASPHALSLSATQAAQTPAAVTNSSESGLLTSTLQNL 240 Query 192 -------PNDWWLVRLLGSITPTERTTIV-RLLGQSYLATGMARFLTSIAQQLTFGPGGT 243 P + WL +TPT TI+ R G +Y + G+A F TSIAQQLTFGPGG+ Sbjct 241 LQSGLPTPTNNWL-----GLTPTIYDTILKRTTGLAYFSNGIASFCTSIAQQLTFGPGGS 295 Query 244 TAGSGGAWYPTPQFAG----------LGAGPAVSASLARAEPVGRLSVPPSWAV----AA 289 TAG+GGAW+PTPQFA A V+A +A VG LSVP WA + Sbjct 296 TAGAGGAWFPTPQFASLGLGNLGGGLGHASGGVAAGAGQAARVGALSVPQHWATLTSAVS 355 Query 290 PAFAEKPEAGTPMSVIGEASSCGQGGLLRGIPLARAGRRTGA--FAHRYGFRHSVITRSP 347 PA + EA TP+ +S GLLRG+P GRR A + ++YGFR+SV+TR P Sbjct 356 PATVSEMEA-TPVQAAATGTSGPANGLLRGMPAGALGRRGAAAGYVNKYGFRYSVLTRPP 414 Query 348 SAG 350 SAG Sbjct 415 SAG 417 Lambda K H 0.317 0.128 0.390 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 648422222280 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40