BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1795 Length=503 Score E Sequences producing significant alignments: (Bits) Value gi|15608932|ref|NP_216311.1| hypothetical protein Rv1795 [Mycoba... 986 0.0 gi|121637696|ref|YP_977919.1| hypothetical protein BCG_1827 [Myc... 983 0.0 gi|31792983|ref|NP_855476.1| hypothetical protein Mb1823 [Mycoba... 982 0.0 gi|289574472|ref|ZP_06454699.1| conserved membrane protein [Myco... 980 0.0 gi|339298359|gb|AEJ50469.1| hypothetical protein CCDC5180_1632 [... 943 0.0 gi|167967227|ref|ZP_02549504.1| hypothetical protein MtubH3_0397... 852 0.0 gi|183982684|ref|YP_001850975.1| hypothetical protein MMAR_2677 ... 837 0.0 gi|118618463|ref|YP_906795.1| hypothetical protein MUL_3080 [Myc... 835 0.0 gi|240172855|ref|ZP_04751514.1| hypothetical protein MkanA1_2631... 808 0.0 gi|296164783|ref|ZP_06847344.1| secretion protein Snm4 [Mycobact... 806 0.0 gi|118466119|ref|YP_882105.1| secretion protein Snm4 [Mycobacter... 762 0.0 gi|41407608|ref|NP_960444.1| hypothetical protein MAP1510 [Mycob... 758 0.0 gi|336457559|gb|EGO36564.1| type VII secretion integral membrane... 756 0.0 gi|342861301|ref|ZP_08717949.1| secretion protein Snm4 [Mycobact... 729 0.0 gi|254820296|ref|ZP_05225297.1| secretion protein Snm4 [Mycobact... 728 0.0 gi|254775395|ref|ZP_05216911.1| secretion protein Snm4 [Mycobact... 726 0.0 gi|15827809|ref|NP_302072.1| hypothetical protein ML1539 [Mycoba... 698 0.0 gi|333990538|ref|YP_004523152.1| hypothetical protein JDM601_189... 563 3e-158 gi|240169215|ref|ZP_04747874.1| hypothetical protein MkanA1_0787... 380 3e-103 gi|339294730|gb|AEJ46841.1| hypothetical membrane protein [Mycob... 367 3e-99 gi|339294731|gb|AEJ46842.1| hypothetical membrane protein [Mycob... 317 4e-84 gi|296164030|ref|ZP_06846653.1| conserved hypothetical protein [... 154 3e-35 gi|296165447|ref|ZP_06847983.1| conserved hypothetical protein [... 128 3e-27 gi|119855165|ref|YP_935770.1| hypothetical protein Mkms_5780 [My... 119 1e-24 gi|167967954|ref|ZP_02550231.1| hypothetical membrane protein [M... 118 2e-24 gi|54022794|ref|YP_117036.1| hypothetical protein nfa8270 [Nocar... 95.5 2e-17 gi|296393782|ref|YP_003658666.1| secretion protein snm4 [Segnili... 92.4 2e-16 gi|317506955|ref|ZP_07964724.1| secretion protein snm4 [Segnilip... 90.5 7e-16 gi|342860122|ref|ZP_08716774.1| secretion protein Snm4 [Mycobact... 86.3 1e-14 gi|289572146|ref|ZP_06452373.1| conserved membrane protein [Myco... 85.9 1e-14 gi|289445488|ref|ZP_06435232.1| conserved membrane protein [Myco... 81.3 4e-13 gi|15611023|ref|NP_218404.1| transmembrane protein [Mycobacteriu... 80.9 5e-13 gi|340628859|ref|YP_004747311.1| hypothetical protein MCAN_39091... 80.5 6e-13 gi|262201637|ref|YP_003272845.1| secretion protein snm4 [Gordoni... 80.1 9e-13 gi|339296695|gb|AEJ48806.1| transmembrane protein [Mycobacterium... 79.3 2e-12 gi|167969425|ref|ZP_02551702.1| conserved transmembrane protein ... 79.3 2e-12 gi|323717303|gb|EGB26508.1| hypothetical protein TMMG_00383 [Myc... 79.0 2e-12 gi|254821257|ref|ZP_05226258.1| secretion protein Snm4 [Mycobact... 78.6 2e-12 gi|289747732|ref|ZP_06507110.1| conserved transmembrane protein ... 78.2 3e-12 gi|15843518|ref|NP_338555.1| hypothetical protein MT4002 [Mycoba... 77.8 4e-12 gi|336457497|gb|EGO36504.1| type VII secretion integral membrane... 77.4 5e-12 gi|41406262|ref|NP_959098.1| hypothetical protein MAP0164 [Mycob... 75.9 2e-11 gi|118464269|ref|YP_879451.1| secretion protein Snm4 [Mycobacter... 75.5 2e-11 gi|169630836|ref|YP_001704485.1| hypothetical protein MAB_3757 [... 75.1 3e-11 gi|343925122|ref|ZP_08764654.1| hypothetical protein GOALK_033_0... 73.9 6e-11 gi|240168357|ref|ZP_04747016.1| hypothetical protein MkanA1_0353... 72.8 1e-10 gi|254773213|ref|ZP_05214729.1| secretion protein Snm4 [Mycobact... 71.6 3e-10 gi|296167003|ref|ZP_06849416.1| transmembrane protein [Mycobacte... 71.2 4e-10 gi|256380557|ref|YP_003104217.1| secretion protein snm4 [Actinos... 66.6 1e-08 gi|291298515|ref|YP_003509793.1| secretion protein snm4 [Stackeb... 66.2 1e-08 >gi|15608932|ref|NP_216311.1| hypothetical protein Rv1795 [Mycobacterium tuberculosis H37Rv] gi|15841264|ref|NP_336301.1| hypothetical protein MT1844 [Mycobacterium tuberculosis CDC1551] gi|148661601|ref|YP_001283124.1| hypothetical protein MRA_1808 [Mycobacterium tuberculosis H37Ra] 65 more sequence titles Length=503 Score = 986 bits (2550), Expect = 0.0, Method: Compositional matrix adjust. Identities = 503/503 (100%), Positives = 503/503 (100%), Gaps = 0/503 (0%) Query 1 MTAVADAPQADIEGVASPQAVVVGVMAGEGVQIGVLLDANAPVSVMTDPLLKVVNSRLRE 60 MTAVADAPQADIEGVASPQAVVVGVMAGEGVQIGVLLDANAPVSVMTDPLLKVVNSRLRE Sbjct 1 MTAVADAPQADIEGVASPQAVVVGVMAGEGVQIGVLLDANAPVSVMTDPLLKVVNSRLRE 60 Query 61 LGEAPLEATGRGRWALCLVDGAPLRATQSLTEQDVYDGDRLWIRFIADTERRSQVIEHIS 120 LGEAPLEATGRGRWALCLVDGAPLRATQSLTEQDVYDGDRLWIRFIADTERRSQVIEHIS Sbjct 61 LGEAPLEATGRGRWALCLVDGAPLRATQSLTEQDVYDGDRLWIRFIADTERRSQVIEHIS 120 Query 121 TAVASDLSKRFARIDPIVAVQVGASMVATGVVLATGVLGWWRWHHNTWLTTIYTAVIGVL 180 TAVASDLSKRFARIDPIVAVQVGASMVATGVVLATGVLGWWRWHHNTWLTTIYTAVIGVL Sbjct 121 TAVASDLSKRFARIDPIVAVQVGASMVATGVVLATGVLGWWRWHHNTWLTTIYTAVIGVL 180 Query 181 VLAVAMLLLMRAKTDADRRVADIMLMSAIMPVTVAAAAAPPGPVGSPQAVLGFGVLTVAA 240 VLAVAMLLLMRAKTDADRRVADIMLMSAIMPVTVAAAAAPPGPVGSPQAVLGFGVLTVAA Sbjct 181 VLAVAMLLLMRAKTDADRRVADIMLMSAIMPVTVAAAAAPPGPVGSPQAVLGFGVLTVAA 240 Query 241 ALALRFTGRRLGIYTTIVIIGALTMLAALARMVAATSAVTLLSSLLLICVVAYHAAPALS 300 ALALRFTGRRLGIYTTIVIIGALTMLAALARMVAATSAVTLLSSLLLICVVAYHAAPALS Sbjct 241 ALALRFTGRRLGIYTTIVIIGALTMLAALARMVAATSAVTLLSSLLLICVVAYHAAPALS 300 Query 301 RRLAGIRLPVFPSATSRWVFEARPDLPTTVVVSGGSAPVLEGPSSVRDVLLQAERARSFL 360 RRLAGIRLPVFPSATSRWVFEARPDLPTTVVVSGGSAPVLEGPSSVRDVLLQAERARSFL Sbjct 301 RRLAGIRLPVFPSATSRWVFEARPDLPTTVVVSGGSAPVLEGPSSVRDVLLQAERARSFL 360 Query 361 SGLLTGLGVMVVVCMTSLCDPHTGQRWLPLILAGFTSGFLLLRGRSYVDRWQSITLAGTA 420 SGLLTGLGVMVVVCMTSLCDPHTGQRWLPLILAGFTSGFLLLRGRSYVDRWQSITLAGTA Sbjct 361 SGLLTGLGVMVVVCMTSLCDPHTGQRWLPLILAGFTSGFLLLRGRSYVDRWQSITLAGTA 420 Query 421 VIIAAAVCVRYALELSSPLAVSIVAAILVLLPAAGMAAAAHVPHTIYSPLFRKFVEWIEY 480 VIIAAAVCVRYALELSSPLAVSIVAAILVLLPAAGMAAAAHVPHTIYSPLFRKFVEWIEY Sbjct 421 VIIAAAVCVRYALELSSPLAVSIVAAILVLLPAAGMAAAAHVPHTIYSPLFRKFVEWIEY 480 Query 481 LCLMPIFPLALWLMNVYAAIRYR 503 LCLMPIFPLALWLMNVYAAIRYR Sbjct 481 LCLMPIFPLALWLMNVYAAIRYR 503 >gi|121637696|ref|YP_977919.1| hypothetical protein BCG_1827 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224990180|ref|YP_002644867.1| hypothetical membrane protein [Mycobacterium bovis BCG str. Tokyo 172] gi|121493343|emb|CAL71814.1| Conserved hypothetical membrane protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224773293|dbj|BAH26099.1| hypothetical membrane protein [Mycobacterium bovis BCG str. Tokyo 172] gi|341601723|emb|CCC64396.1| conserved hypothetical membrane protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=503 Score = 983 bits (2542), Expect = 0.0, Method: Compositional matrix adjust. Identities = 502/503 (99%), Positives = 502/503 (99%), Gaps = 0/503 (0%) Query 1 MTAVADAPQADIEGVASPQAVVVGVMAGEGVQIGVLLDANAPVSVMTDPLLKVVNSRLRE 60 MTAVADAPQADIEGVASPQAVVVGVMAGEGVQIGVLLDANAPVSVMTDPLLKVVNSRLRE Sbjct 1 MTAVADAPQADIEGVASPQAVVVGVMAGEGVQIGVLLDANAPVSVMTDPLLKVVNSRLRE 60 Query 61 LGEAPLEATGRGRWALCLVDGAPLRATQSLTEQDVYDGDRLWIRFIADTERRSQVIEHIS 120 LGEAPLEATGRGRWALCLVDGAPLRATQSLTEQDVYDGDRLWIRFIADTERRSQVIEHIS Sbjct 61 LGEAPLEATGRGRWALCLVDGAPLRATQSLTEQDVYDGDRLWIRFIADTERRSQVIEHIS 120 Query 121 TAVASDLSKRFARIDPIVAVQVGASMVATGVVLATGVLGWWRWHHNTWLTTIYTAVIGVL 180 TAVASDLSKRFARIDPIVAVQVGASMVATGVVLATGVLGWWRWHHNTWLTTIYTAVIGVL Sbjct 121 TAVASDLSKRFARIDPIVAVQVGASMVATGVVLATGVLGWWRWHHNTWLTTIYTAVIGVL 180 Query 181 VLAVAMLLLMRAKTDADRRVADIMLMSAIMPVTVAAAAAPPGPVGSPQAVLGFGVLTVAA 240 VLAVAMLLLMRAKTDADRRVADIMLMSAIMPVTVAAAAAPPGPVGSPQAVLGFGVLTVAA Sbjct 181 VLAVAMLLLMRAKTDADRRVADIMLMSAIMPVTVAAAAAPPGPVGSPQAVLGFGVLTVAA 240 Query 241 ALALRFTGRRLGIYTTIVIIGALTMLAALARMVAATSAVTLLSSLLLICVVAYHAAPALS 300 ALALRFTGRRLGIYTTIVII ALTMLAALARMVAATSAVTLLSSLLLICVVAYHAAPALS Sbjct 241 ALALRFTGRRLGIYTTIVIIDALTMLAALARMVAATSAVTLLSSLLLICVVAYHAAPALS 300 Query 301 RRLAGIRLPVFPSATSRWVFEARPDLPTTVVVSGGSAPVLEGPSSVRDVLLQAERARSFL 360 RRLAGIRLPVFPSATSRWVFEARPDLPTTVVVSGGSAPVLEGPSSVRDVLLQAERARSFL Sbjct 301 RRLAGIRLPVFPSATSRWVFEARPDLPTTVVVSGGSAPVLEGPSSVRDVLLQAERARSFL 360 Query 361 SGLLTGLGVMVVVCMTSLCDPHTGQRWLPLILAGFTSGFLLLRGRSYVDRWQSITLAGTA 420 SGLLTGLGVMVVVCMTSLCDPHTGQRWLPLILAGFTSGFLLLRGRSYVDRWQSITLAGTA Sbjct 361 SGLLTGLGVMVVVCMTSLCDPHTGQRWLPLILAGFTSGFLLLRGRSYVDRWQSITLAGTA 420 Query 421 VIIAAAVCVRYALELSSPLAVSIVAAILVLLPAAGMAAAAHVPHTIYSPLFRKFVEWIEY 480 VIIAAAVCVRYALELSSPLAVSIVAAILVLLPAAGMAAAAHVPHTIYSPLFRKFVEWIEY Sbjct 421 VIIAAAVCVRYALELSSPLAVSIVAAILVLLPAAGMAAAAHVPHTIYSPLFRKFVEWIEY 480 Query 481 LCLMPIFPLALWLMNVYAAIRYR 503 LCLMPIFPLALWLMNVYAAIRYR Sbjct 481 LCLMPIFPLALWLMNVYAAIRYR 503 >gi|31792983|ref|NP_855476.1| hypothetical protein Mb1823 [Mycobacterium bovis AF2122/97] gi|31618574|emb|CAD94526.1| CONSERVED HYPOTHETICAL MEMBRANE PROTEIN [Mycobacterium bovis AF2122/97] Length=503 Score = 982 bits (2538), Expect = 0.0, Method: Compositional matrix adjust. Identities = 501/503 (99%), Positives = 501/503 (99%), Gaps = 0/503 (0%) Query 1 MTAVADAPQADIEGVASPQAVVVGVMAGEGVQIGVLLDANAPVSVMTDPLLKVVNSRLRE 60 MTAVADAPQADIEGVASPQAVVVGVMAGEGVQIGVLLDANAPVSVMTDPLLKVVNSRLRE Sbjct 1 MTAVADAPQADIEGVASPQAVVVGVMAGEGVQIGVLLDANAPVSVMTDPLLKVVNSRLRE 60 Query 61 LGEAPLEATGRGRWALCLVDGAPLRATQSLTEQDVYDGDRLWIRFIADTERRSQVIEHIS 120 LGEAPLEATGRGRWALCLVDGAPLRATQSLTEQDVYDGDRLWIRFIADTERRSQVIEHIS Sbjct 61 LGEAPLEATGRGRWALCLVDGAPLRATQSLTEQDVYDGDRLWIRFIADTERRSQVIEHIS 120 Query 121 TAVASDLSKRFARIDPIVAVQVGASMVATGVVLATGVLGWWRWHHNTWLTTIYTAVIGVL 180 TAVASDLSKRFARIDPIVAVQVGASMVATGVVLATGVLGWWRWHHNTWLTTIYTAVIGVL Sbjct 121 TAVASDLSKRFARIDPIVAVQVGASMVATGVVLATGVLGWWRWHHNTWLTTIYTAVIGVL 180 Query 181 VLAVAMLLLMRAKTDADRRVADIMLMSAIMPVTVAAAAAPPGPVGSPQAVLGFGVLTVAA 240 VLAVAMLLLMRAKTDADRRVADIMLMSAIMPVTVAAAAAPPGPVGSPQAVLGFGVLTVAA Sbjct 181 VLAVAMLLLMRAKTDADRRVADIMLMSAIMPVTVAAAAAPPGPVGSPQAVLGFGVLTVAA 240 Query 241 ALALRFTGRRLGIYTTIVIIGALTMLAALARMVAATSAVTLLSSLLLICVVAYHAAPALS 300 ALALRFTGRRLGIYT IVII ALTMLAALARMVAATSAVTLLSSLLLICVVAYHAAPALS Sbjct 241 ALALRFTGRRLGIYTAIVIIDALTMLAALARMVAATSAVTLLSSLLLICVVAYHAAPALS 300 Query 301 RRLAGIRLPVFPSATSRWVFEARPDLPTTVVVSGGSAPVLEGPSSVRDVLLQAERARSFL 360 RRLAGIRLPVFPSATSRWVFEARPDLPTTVVVSGGSAPVLEGPSSVRDVLLQAERARSFL Sbjct 301 RRLAGIRLPVFPSATSRWVFEARPDLPTTVVVSGGSAPVLEGPSSVRDVLLQAERARSFL 360 Query 361 SGLLTGLGVMVVVCMTSLCDPHTGQRWLPLILAGFTSGFLLLRGRSYVDRWQSITLAGTA 420 SGLLTGLGVMVVVCMTSLCDPHTGQRWLPLILAGFTSGFLLLRGRSYVDRWQSITLAGTA Sbjct 361 SGLLTGLGVMVVVCMTSLCDPHTGQRWLPLILAGFTSGFLLLRGRSYVDRWQSITLAGTA 420 Query 421 VIIAAAVCVRYALELSSPLAVSIVAAILVLLPAAGMAAAAHVPHTIYSPLFRKFVEWIEY 480 VIIAAAVCVRYALELSSPLAVSIVAAILVLLPAAGMAAAAHVPHTIYSPLFRKFVEWIEY Sbjct 421 VIIAAAVCVRYALELSSPLAVSIVAAILVLLPAAGMAAAAHVPHTIYSPLFRKFVEWIEY 480 Query 481 LCLMPIFPLALWLMNVYAAIRYR 503 LCLMPIFPLALWLMNVYAAIRYR Sbjct 481 LCLMPIFPLALWLMNVYAAIRYR 503 >gi|289574472|ref|ZP_06454699.1| conserved membrane protein [Mycobacterium tuberculosis K85] gi|339631849|ref|YP_004723491.1| hypothetical protein MAF_18170 [Mycobacterium africanum GM041182] gi|289538903|gb|EFD43481.1| conserved membrane protein [Mycobacterium tuberculosis K85] gi|339331205|emb|CCC26887.1| conserved hypothetical membrane protein [Mycobacterium africanum GM041182] Length=503 Score = 980 bits (2533), Expect = 0.0, Method: Compositional matrix adjust. Identities = 501/503 (99%), Positives = 501/503 (99%), Gaps = 0/503 (0%) Query 1 MTAVADAPQADIEGVASPQAVVVGVMAGEGVQIGVLLDANAPVSVMTDPLLKVVNSRLRE 60 MTAVADAPQADIEGVASPQAVVVGVMAGEGVQIGVLLDANAPVSVMTDPLLKVVNSRLRE Sbjct 1 MTAVADAPQADIEGVASPQAVVVGVMAGEGVQIGVLLDANAPVSVMTDPLLKVVNSRLRE 60 Query 61 LGEAPLEATGRGRWALCLVDGAPLRATQSLTEQDVYDGDRLWIRFIADTERRSQVIEHIS 120 LGEAPLEATGRGRWALCLVDGAPLRATQSLTEQDVYDGDRLWIRFIADTERRSQVIEHIS Sbjct 61 LGEAPLEATGRGRWALCLVDGAPLRATQSLTEQDVYDGDRLWIRFIADTERRSQVIEHIS 120 Query 121 TAVASDLSKRFARIDPIVAVQVGASMVATGVVLATGVLGWWRWHHNTWLTTIYTAVIGVL 180 TAVASDLSKRFARIDPIVAVQVGASMVATGVVLATGVLGWWRWHHNTWLTTIYTAVIGVL Sbjct 121 TAVASDLSKRFARIDPIVAVQVGASMVATGVVLATGVLGWWRWHHNTWLTTIYTAVIGVL 180 Query 181 VLAVAMLLLMRAKTDADRRVADIMLMSAIMPVTVAAAAAPPGPVGSPQAVLGFGVLTVAA 240 VLAVAMLLLMRAKTDADRRVADIMLMSAIMPVTVAAAAA PGPVGSPQAVLGFGVLTVAA Sbjct 181 VLAVAMLLLMRAKTDADRRVADIMLMSAIMPVTVAAAAALPGPVGSPQAVLGFGVLTVAA 240 Query 241 ALALRFTGRRLGIYTTIVIIGALTMLAALARMVAATSAVTLLSSLLLICVVAYHAAPALS 300 ALALRFTGRRLGIYTTIVII ALTMLAALARMVAATSAVTLLSSLLLICVVAYHAAPALS Sbjct 241 ALALRFTGRRLGIYTTIVIIDALTMLAALARMVAATSAVTLLSSLLLICVVAYHAAPALS 300 Query 301 RRLAGIRLPVFPSATSRWVFEARPDLPTTVVVSGGSAPVLEGPSSVRDVLLQAERARSFL 360 RRLAGIRLPVFPSATSRWVFEARPDLPTTVVVSGGSAPVLEGPSSVRDVLLQAERARSFL Sbjct 301 RRLAGIRLPVFPSATSRWVFEARPDLPTTVVVSGGSAPVLEGPSSVRDVLLQAERARSFL 360 Query 361 SGLLTGLGVMVVVCMTSLCDPHTGQRWLPLILAGFTSGFLLLRGRSYVDRWQSITLAGTA 420 SGLLTGLGVMVVVCMTSLCDPHTGQRWLPLILAGFTSGFLLLRGRSYVDRWQSITLAGTA Sbjct 361 SGLLTGLGVMVVVCMTSLCDPHTGQRWLPLILAGFTSGFLLLRGRSYVDRWQSITLAGTA 420 Query 421 VIIAAAVCVRYALELSSPLAVSIVAAILVLLPAAGMAAAAHVPHTIYSPLFRKFVEWIEY 480 VIIAAAVCVRYALELSSPLAVSIVAAILVLLPAAGMAAAAHVPHTIYSPLFRKFVEWIEY Sbjct 421 VIIAAAVCVRYALELSSPLAVSIVAAILVLLPAAGMAAAAHVPHTIYSPLFRKFVEWIEY 480 Query 481 LCLMPIFPLALWLMNVYAAIRYR 503 LCLMPIFPLALWLMNVYAAIRYR Sbjct 481 LCLMPIFPLALWLMNVYAAIRYR 503 >gi|339298359|gb|AEJ50469.1| hypothetical protein CCDC5180_1632 [Mycobacterium tuberculosis CCDC5180] Length=481 Score = 943 bits (2437), Expect = 0.0, Method: Compositional matrix adjust. Identities = 480/481 (99%), Positives = 481/481 (100%), Gaps = 0/481 (0%) Query 23 VGVMAGEGVQIGVLLDANAPVSVMTDPLLKVVNSRLRELGEAPLEATGRGRWALCLVDGA 82 +GVMAGEGVQIGVLLDANAPVSVMTDPLLKVVNSRLRELGEAPLEATGRGRWALCLVDGA Sbjct 1 MGVMAGEGVQIGVLLDANAPVSVMTDPLLKVVNSRLRELGEAPLEATGRGRWALCLVDGA 60 Query 83 PLRATQSLTEQDVYDGDRLWIRFIADTERRSQVIEHISTAVASDLSKRFARIDPIVAVQV 142 PLRATQSLTEQDVYDGDRLWIRFIADTERRSQVIEHISTAVASDLSKRFARIDPIVAVQV Sbjct 61 PLRATQSLTEQDVYDGDRLWIRFIADTERRSQVIEHISTAVASDLSKRFARIDPIVAVQV 120 Query 143 GASMVATGVVLATGVLGWWRWHHNTWLTTIYTAVIGVLVLAVAMLLLMRAKTDADRRVAD 202 GASMVATGVVLATGVLGWWRWHHNTWLTTIYTAVIGVLVLAVAMLLLMRAKTDADRRVAD Sbjct 121 GASMVATGVVLATGVLGWWRWHHNTWLTTIYTAVIGVLVLAVAMLLLMRAKTDADRRVAD 180 Query 203 IMLMSAIMPVTVAAAAAPPGPVGSPQAVLGFGVLTVAAALALRFTGRRLGIYTTIVIIGA 262 IMLMSAIMPVTVAAAAAPPGPVGSPQAVLGFGVLTVAAALALRFTGRRLGIYTTIVIIGA Sbjct 181 IMLMSAIMPVTVAAAAAPPGPVGSPQAVLGFGVLTVAAALALRFTGRRLGIYTTIVIIGA 240 Query 263 LTMLAALARMVAATSAVTLLSSLLLICVVAYHAAPALSRRLAGIRLPVFPSATSRWVFEA 322 LTMLAALARMVAATSAVTLLSSLLLICVVAYHAAPALSRRLAGIRLPVFPSATSRWVFEA Sbjct 241 LTMLAALARMVAATSAVTLLSSLLLICVVAYHAAPALSRRLAGIRLPVFPSATSRWVFEA 300 Query 323 RPDLPTTVVVSGGSAPVLEGPSSVRDVLLQAERARSFLSGLLTGLGVMVVVCMTSLCDPH 382 RPDLPTTVVVSGGSAPVLEGPSSVRDVLLQAERARSFLSGLLTGLGVMVVVCMTSLCDPH Sbjct 301 RPDLPTTVVVSGGSAPVLEGPSSVRDVLLQAERARSFLSGLLTGLGVMVVVCMTSLCDPH 360 Query 383 TGQRWLPLILAGFTSGFLLLRGRSYVDRWQSITLAGTAVIIAAAVCVRYALELSSPLAVS 442 TGQRWLPLILAGFTSGFLLLRGRSYVDRWQSITLAGTAVIIAAAVCVRYALELSSPLAVS Sbjct 361 TGQRWLPLILAGFTSGFLLLRGRSYVDRWQSITLAGTAVIIAAAVCVRYALELSSPLAVS 420 Query 443 IVAAILVLLPAAGMAAAAHVPHTIYSPLFRKFVEWIEYLCLMPIFPLALWLMNVYAAIRY 502 IVAAILVLLPAAGMAAAAHVPHTIYSPLFRKFVEWIEYLCLMPIFPLALWLMNVYAAIRY Sbjct 421 IVAAILVLLPAAGMAAAAHVPHTIYSPLFRKFVEWIEYLCLMPIFPLALWLMNVYAAIRY 480 Query 503 R 503 R Sbjct 481 R 481 >gi|167967227|ref|ZP_02549504.1| hypothetical protein MtubH3_03977 [Mycobacterium tuberculosis H37Ra] Length=434 Score = 852 bits (2201), Expect = 0.0, Method: Compositional matrix adjust. Identities = 434/434 (100%), Positives = 434/434 (100%), Gaps = 0/434 (0%) Query 70 GRGRWALCLVDGAPLRATQSLTEQDVYDGDRLWIRFIADTERRSQVIEHISTAVASDLSK 129 GRGRWALCLVDGAPLRATQSLTEQDVYDGDRLWIRFIADTERRSQVIEHISTAVASDLSK Sbjct 1 GRGRWALCLVDGAPLRATQSLTEQDVYDGDRLWIRFIADTERRSQVIEHISTAVASDLSK 60 Query 130 RFARIDPIVAVQVGASMVATGVVLATGVLGWWRWHHNTWLTTIYTAVIGVLVLAVAMLLL 189 RFARIDPIVAVQVGASMVATGVVLATGVLGWWRWHHNTWLTTIYTAVIGVLVLAVAMLLL Sbjct 61 RFARIDPIVAVQVGASMVATGVVLATGVLGWWRWHHNTWLTTIYTAVIGVLVLAVAMLLL 120 Query 190 MRAKTDADRRVADIMLMSAIMPVTVAAAAAPPGPVGSPQAVLGFGVLTVAAALALRFTGR 249 MRAKTDADRRVADIMLMSAIMPVTVAAAAAPPGPVGSPQAVLGFGVLTVAAALALRFTGR Sbjct 121 MRAKTDADRRVADIMLMSAIMPVTVAAAAAPPGPVGSPQAVLGFGVLTVAAALALRFTGR 180 Query 250 RLGIYTTIVIIGALTMLAALARMVAATSAVTLLSSLLLICVVAYHAAPALSRRLAGIRLP 309 RLGIYTTIVIIGALTMLAALARMVAATSAVTLLSSLLLICVVAYHAAPALSRRLAGIRLP Sbjct 181 RLGIYTTIVIIGALTMLAALARMVAATSAVTLLSSLLLICVVAYHAAPALSRRLAGIRLP 240 Query 310 VFPSATSRWVFEARPDLPTTVVVSGGSAPVLEGPSSVRDVLLQAERARSFLSGLLTGLGV 369 VFPSATSRWVFEARPDLPTTVVVSGGSAPVLEGPSSVRDVLLQAERARSFLSGLLTGLGV Sbjct 241 VFPSATSRWVFEARPDLPTTVVVSGGSAPVLEGPSSVRDVLLQAERARSFLSGLLTGLGV 300 Query 370 MVVVCMTSLCDPHTGQRWLPLILAGFTSGFLLLRGRSYVDRWQSITLAGTAVIIAAAVCV 429 MVVVCMTSLCDPHTGQRWLPLILAGFTSGFLLLRGRSYVDRWQSITLAGTAVIIAAAVCV Sbjct 301 MVVVCMTSLCDPHTGQRWLPLILAGFTSGFLLLRGRSYVDRWQSITLAGTAVIIAAAVCV 360 Query 430 RYALELSSPLAVSIVAAILVLLPAAGMAAAAHVPHTIYSPLFRKFVEWIEYLCLMPIFPL 489 RYALELSSPLAVSIVAAILVLLPAAGMAAAAHVPHTIYSPLFRKFVEWIEYLCLMPIFPL Sbjct 361 RYALELSSPLAVSIVAAILVLLPAAGMAAAAHVPHTIYSPLFRKFVEWIEYLCLMPIFPL 420 Query 490 ALWLMNVYAAIRYR 503 ALWLMNVYAAIRYR Sbjct 421 ALWLMNVYAAIRYR 434 >gi|183982684|ref|YP_001850975.1| hypothetical protein MMAR_2677 [Mycobacterium marinum M] gi|183176010|gb|ACC41120.1| conserved membrane protein [Mycobacterium marinum M] Length=503 Score = 837 bits (2161), Expect = 0.0, Method: Compositional matrix adjust. Identities = 423/503 (85%), Positives = 466/503 (93%), Gaps = 0/503 (0%) Query 1 MTAVADAPQADIEGVASPQAVVVGVMAGEGVQIGVLLDANAPVSVMTDPLLKVVNSRLRE 60 MTAVADAPQA++EGV+SP+AVVVG+MAGEGVQIGVLLDANAPVSVMTDPLLKVVNSRLRE Sbjct 1 MTAVADAPQAELEGVSSPRAVVVGIMAGEGVQIGVLLDANAPVSVMTDPLLKVVNSRLRE 60 Query 61 LGEAPLEATGRGRWALCLVDGAPLRATQSLTEQDVYDGDRLWIRFIADTERRSQVIEHIS 120 LGE+ LEA GRGRWALCL+DG+PLRATQSLTEQDVYDGDRLWIRFI DTE RSQVIEHIS Sbjct 61 LGESTLEAAGRGRWALCLIDGSPLRATQSLTEQDVYDGDRLWIRFIPDTEHRSQVIEHIS 120 Query 121 TAVASDLSKRFARIDPIVAVQVGASMVATGVVLATGVLGWWRWHHNTWLTTIYTAVIGVL 180 TAVAS+LSKRFA IDP+VAVQVGA MV TGV+LA+GVLGWWRWHHNTWLTTI+ +VI VL Sbjct 121 TAVASNLSKRFASIDPVVAVQVGAGMVGTGVILASGVLGWWRWHHNTWLTTIFASVIAVL 180 Query 181 VLAVAMLLLMRAKTDADRRVADIMLMSAIMPVTVAAAAAPPGPVGSPQAVLGFGVLTVAA 240 VL VAM+LLMRA TDADRRVADIML+S + P+TVAAA+APPG VGSPQAVLGFGVL++AA Sbjct 181 VLMVAMMLLMRATTDADRRVADIMLVSGLAPLTVAAASAPPGSVGSPQAVLGFGVLSIAA 240 Query 241 ALALRFTGRRLGIYTTIVIIGALTMLAALARMVAATSAVTLLSSLLLICVVAYHAAPALS 300 ALALRFTGRRL IYT IV I LT LA+L+RMVAATSAVTL +++LLICVV YHA+PALS Sbjct 241 ALALRFTGRRLAIYTAIVTICGLTTLASLSRMVAATSAVTLFATMLLICVVMYHASPALS 300 Query 301 RRLAGIRLPVFPSATSRWVFEARPDLPTTVVVSGGSAPVLEGPSSVRDVLLQAERARSFL 360 RRL+GIRLPVFPSATSRWVFEARPDLPTTV V+ G PVLEGP+SVRDV+LQAERARSFL Sbjct 301 RRLSGIRLPVFPSATSRWVFEARPDLPTTVAVAAGGPPVLEGPASVRDVVLQAERARSFL 360 Query 361 SGLLTGLGVMVVVCMTSLCDPHTGQRWLPLILAGFTSGFLLLRGRSYVDRWQSITLAGTA 420 SGLL GLGV++VV +TSLC+PHT +RWLPL+LAGFTSGFL+LRGRSYVDRWQSITLA TA Sbjct 361 SGLLVGLGVLMVVSLTSLCNPHTSERWLPLMLAGFTSGFLMLRGRSYVDRWQSITLAVTA 420 Query 421 VIIAAAVCVRYALELSSPLAVSIVAAILVLLPAAGMAAAAHVPHTIYSPLFRKFVEWIEY 480 VI+ AAV VRYAL LSSPL+VSIVA++LVLLPAAGM AAA VP+TIYSPLFRKFVEW EY Sbjct 421 VIVVAAVSVRYALVLSSPLSVSIVASLLVLLPAAGMTAAAVVPNTIYSPLFRKFVEWTEY 480 Query 481 LCLMPIFPLALWLMNVYAAIRYR 503 LCLMPIFPLA WLMNVYAAIRYR Sbjct 481 LCLMPIFPLAFWLMNVYAAIRYR 503 >gi|118618463|ref|YP_906795.1| hypothetical protein MUL_3080 [Mycobacterium ulcerans Agy99] gi|118570573|gb|ABL05324.1| conserved membrane protein [Mycobacterium ulcerans Agy99] Length=503 Score = 835 bits (2156), Expect = 0.0, Method: Compositional matrix adjust. Identities = 422/503 (84%), Positives = 465/503 (93%), Gaps = 0/503 (0%) Query 1 MTAVADAPQADIEGVASPQAVVVGVMAGEGVQIGVLLDANAPVSVMTDPLLKVVNSRLRE 60 MTAVADAPQA++EGV+SP+AVVVG+MAGEGVQIGVLLDANAPVSVMTDPLLKVVNSRLRE Sbjct 1 MTAVADAPQAELEGVSSPRAVVVGIMAGEGVQIGVLLDANAPVSVMTDPLLKVVNSRLRE 60 Query 61 LGEAPLEATGRGRWALCLVDGAPLRATQSLTEQDVYDGDRLWIRFIADTERRSQVIEHIS 120 LGE+ LEA GRGRWALCL+DG+PLRATQSLTEQDVYDGDRLWIRFI DTE RSQVIEHIS Sbjct 61 LGESTLEAAGRGRWALCLIDGSPLRATQSLTEQDVYDGDRLWIRFIPDTEHRSQVIEHIS 120 Query 121 TAVASDLSKRFARIDPIVAVQVGASMVATGVVLATGVLGWWRWHHNTWLTTIYTAVIGVL 180 TAVAS+LSKRFA IDP+VAVQVGA MV TGV+LA+GVLGWWRWHHNTWLTTI+ +VI VL Sbjct 121 TAVASNLSKRFASIDPVVAVQVGAGMVGTGVILASGVLGWWRWHHNTWLTTIFASVIAVL 180 Query 181 VLAVAMLLLMRAKTDADRRVADIMLMSAIMPVTVAAAAAPPGPVGSPQAVLGFGVLTVAA 240 VL VAM+LLMRA TDADRRVADIML+S + P+TVAAA+APPG VGSPQA LGFGVL++AA Sbjct 181 VLMVAMMLLMRATTDADRRVADIMLVSGLAPLTVAAASAPPGSVGSPQAALGFGVLSIAA 240 Query 241 ALALRFTGRRLGIYTTIVIIGALTMLAALARMVAATSAVTLLSSLLLICVVAYHAAPALS 300 ALALRFTGRRL IYT IV I LT LA+L+RMVAATSAVTL +++LLICVV YHA+PALS Sbjct 241 ALALRFTGRRLAIYTAIVTICGLTTLASLSRMVAATSAVTLFATMLLICVVMYHASPALS 300 Query 301 RRLAGIRLPVFPSATSRWVFEARPDLPTTVVVSGGSAPVLEGPSSVRDVLLQAERARSFL 360 RRL+GIRLPVFPSATSRWVFEARPDLPTTV V+ G PVLEGP+SVRDV+LQAERARSFL Sbjct 301 RRLSGIRLPVFPSATSRWVFEARPDLPTTVAVAAGGPPVLEGPASVRDVVLQAERARSFL 360 Query 361 SGLLTGLGVMVVVCMTSLCDPHTGQRWLPLILAGFTSGFLLLRGRSYVDRWQSITLAGTA 420 SGLL GLGV++VV +TSLC+PHT +RWLPL+LAGFTSGFL+LRGRSYVDRWQSITLA TA Sbjct 361 SGLLVGLGVLMVVSLTSLCNPHTSERWLPLMLAGFTSGFLMLRGRSYVDRWQSITLAVTA 420 Query 421 VIIAAAVCVRYALELSSPLAVSIVAAILVLLPAAGMAAAAHVPHTIYSPLFRKFVEWIEY 480 VI+ AAV VRYAL LSSPL+VSIVA++LVLLPAAGM AAA VP+TIYSPLFRKFVEW EY Sbjct 421 VIVVAAVSVRYALVLSSPLSVSIVASLLVLLPAAGMTAAAVVPNTIYSPLFRKFVEWTEY 480 Query 481 LCLMPIFPLALWLMNVYAAIRYR 503 LCLMPIFPLA WLMNVYAAIRYR Sbjct 481 LCLMPIFPLAFWLMNVYAAIRYR 503 >gi|240172855|ref|ZP_04751514.1| hypothetical protein MkanA1_26317 [Mycobacterium kansasii ATCC 12478] Length=503 Score = 808 bits (2087), Expect = 0.0, Method: Compositional matrix adjust. Identities = 425/503 (85%), Positives = 466/503 (93%), Gaps = 0/503 (0%) Query 1 MTAVADAPQADIEGVASPQAVVVGVMAGEGVQIGVLLDANAPVSVMTDPLLKVVNSRLRE 60 MTAVADAPQ +IEGV+SP++VVVG+MAG GVQIGVLLDANAPVSVMT+PLLKVVNSRLRE Sbjct 1 MTAVADAPQTEIEGVSSPRSVVVGIMAGVGVQIGVLLDANAPVSVMTEPLLKVVNSRLRE 60 Query 61 LGEAPLEATGRGRWALCLVDGAPLRATQSLTEQDVYDGDRLWIRFIADTERRSQVIEHIS 120 LGE PLEATGRGRWALCLVDG+PLRATQSLTEQ+VYDGDRLWIRFI DTE+RSQVIEHIS Sbjct 61 LGEPPLEATGRGRWALCLVDGSPLRATQSLTEQEVYDGDRLWIRFIPDTEKRSQVIEHIS 120 Query 121 TAVASDLSKRFARIDPIVAVQVGASMVATGVVLATGVLGWWRWHHNTWLTTIYTAVIGVL 180 TAVAS+LSKRFA IDP+VAVQVGASMVA GVVLA+G+LGWWRWHHNTWLTTI+ +V+ VL Sbjct 121 TAVASNLSKRFASIDPVVAVQVGASMVAIGVVLASGLLGWWRWHHNTWLTTIFASVVAVL 180 Query 181 VLAVAMLLLMRAKTDADRRVADIMLMSAIMPVTVAAAAAPPGPVGSPQAVLGFGVLTVAA 240 VLAV+MLLLMRAKTDADRRVADIMLMS + P+ VAAAAAPPGPVGSPQAVLGFGVL+VAA Sbjct 181 VLAVSMLLLMRAKTDADRRVADIMLMSGLAPLAVAAAAAPPGPVGSPQAVLGFGVLSVAA 240 Query 241 ALALRFTGRRLGIYTTIVIIGALTMLAALARMVAATSAVTLLSSLLLICVVAYHAAPALS 300 LALRFTGRRLGIYT ++ I + LA LARMVAA SAVTL SS +L CV+ YHAAPALS Sbjct 241 TLALRFTGRRLGIYTAVITISVVATLAGLARMVAAASAVTLFSSTVLACVLLYHAAPALS 300 Query 301 RRLAGIRLPVFPSATSRWVFEARPDLPTTVVVSGGSAPVLEGPSSVRDVLLQAERARSFL 360 RRLAGIRLPVFPSATSRWVFEARPDLPTTVV SGG LEGP+SVRDV+LQAERARSFL Sbjct 301 RRLAGIRLPVFPSATSRWVFEARPDLPTTVVRSGGGPATLEGPASVRDVVLQAERARSFL 360 Query 361 SGLLTGLGVMVVVCMTSLCDPHTGQRWLPLILAGFTSGFLLLRGRSYVDRWQSITLAGTA 420 SGLL GLGV++VVC+T+LC+PHTGQRWLPL+LAGFT+GFLLLRGRSYVDRWQ+ TLAGTA Sbjct 361 SGLLVGLGVLMVVCLTALCNPHTGQRWLPLLLAGFTAGFLLLRGRSYVDRWQATTLAGTA 420 Query 421 VIIAAAVCVRYALELSSPLAVSIVAAILVLLPAAGMAAAAHVPHTIYSPLFRKFVEWIEY 480 VII AAV +RYA+ L+SPL+VSI AAILVLLPAAG+ AAA VP+TIYSPLFRKFVEWIEY Sbjct 421 VIIVAAVLIRYAVVLASPLSVSIAAAILVLLPAAGLTAAAVVPNTIYSPLFRKFVEWIEY 480 Query 481 LCLMPIFPLALWLMNVYAAIRYR 503 LCLMPIFPLALWLMNVYAAIRYR Sbjct 481 LCLMPIFPLALWLMNVYAAIRYR 503 >gi|296164783|ref|ZP_06847344.1| secretion protein Snm4 [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295899860|gb|EFG79305.1| secretion protein Snm4 [Mycobacterium parascrofulaceum ATCC BAA-614] Length=503 Score = 806 bits (2083), Expect = 0.0, Method: Compositional matrix adjust. Identities = 398/503 (80%), Positives = 453/503 (91%), Gaps = 0/503 (0%) Query 1 MTAVADAPQADIEGVASPQAVVVGVMAGEGVQIGVLLDANAPVSVMTDPLLKVVNSRLRE 60 MTAV +A Q D+EG++ P+AVVVGVMAG GVQIGVLLDANAPVSVMT+PLLKVVNSRLRE Sbjct 1 MTAVVEALQPDVEGISQPRAVVVGVMAGAGVQIGVLLDANAPVSVMTEPLLKVVNSRLRE 60 Query 61 LGEAPLEATGRGRWALCLVDGAPLRATQSLTEQDVYDGDRLWIRFIADTERRSQVIEHIS 120 LGE PLEATGRGRWALCLVDG PLRATQSLTEQDVYDGDRLWIRFI DTE RSQVIEHIS Sbjct 61 LGETPLEATGRGRWALCLVDGTPLRATQSLTEQDVYDGDRLWIRFIQDTEHRSQVIEHIS 120 Query 121 TAVASDLSKRFARIDPIVAVQVGASMVATGVVLATGVLGWWRWHHNTWLTTIYTAVIGVL 180 TAVA++LSKRFA IDP++AVQVGASMVA GV A+G+L W+RWHHN+WL T Y+AVI ++ Sbjct 121 TAVAANLSKRFAAIDPVMAVQVGASMVAAGVTAASGLLLWYRWHHNSWLPTAYSAVIALV 180 Query 181 VLAVAMLLLMRAKTDADRRVADIMLMSAIMPVTVAAAAAPPGPVGSPQAVLGFGVLTVAA 240 VL V+++LLMRA+TD DRR+ADIML+S + P+TV+AAAAPPG +GSP AVLGFGVLT+A Sbjct 181 VLGVSLMLLMRARTDQDRRIADIMLLSGLAPLTVSAAAAPPGGLGSPHAVLGFGVLTIAT 240 Query 241 ALALRFTGRRLGIYTTIVIIGALTMLAALARMVAATSAVTLLSSLLLICVVAYHAAPALS 300 LALRFTGRRLG+YT ++ + +T +AALARMVA TSAVTLL+S++L+CV+ YH APALS Sbjct 241 MLALRFTGRRLGLYTALITVSVVTAIAALARMVAMTSAVTLLTSVVLVCVLVYHTAPALS 300 Query 301 RRLAGIRLPVFPSATSRWVFEARPDLPTTVVVSGGSAPVLEGPSSVRDVLLQAERARSFL 360 RRLAGIRLPVFPSATSRWVFEARPDLPTTVV S G PVLEGP+SVRDVL+QAERARSFL Sbjct 301 RRLAGIRLPVFPSATSRWVFEARPDLPTTVVRSDGGPPVLEGPASVRDVLVQAERARSFL 360 Query 361 SGLLTGLGVMVVVCMTSLCDPHTGQRWLPLILAGFTSGFLLLRGRSYVDRWQSITLAGTA 420 +GLL GLGV++VV +T+L DPHTGQRWLPL+LAGF++GFL+LRGRSYVDRWQ+ITLA TA Sbjct 361 TGLLVGLGVLMVVSLTALSDPHTGQRWLPLLLAGFSAGFLMLRGRSYVDRWQAITLAVTA 420 Query 421 VIIAAAVCVRYALELSSPLAVSIVAAILVLLPAAGMAAAAHVPHTIYSPLFRKFVEWIEY 480 V+I AV RYAL L SPLAVSI AAILVLLPAAG+ +AA VP+TIYSPLFRKFVEWIEY Sbjct 421 VLIVGAVVARYALVLQSPLAVSISAAILVLLPAAGLTSAAVVPNTIYSPLFRKFVEWIEY 480 Query 481 LCLMPIFPLALWLMNVYAAIRYR 503 LCLMPIFPLALWLMNVYAAIRYR Sbjct 481 LCLMPIFPLALWLMNVYAAIRYR 503 >gi|118466119|ref|YP_882105.1| secretion protein Snm4 [Mycobacterium avium 104] gi|118167406|gb|ABK68303.1| secretion protein Snm4 [Mycobacterium avium 104] Length=503 Score = 762 bits (1967), Expect = 0.0, Method: Compositional matrix adjust. Identities = 399/503 (80%), Positives = 448/503 (90%), Gaps = 0/503 (0%) Query 1 MTAVADAPQADIEGVASPQAVVVGVMAGEGVQIGVLLDANAPVSVMTDPLLKVVNSRLRE 60 MTAV + PQ D+EG++ PQAVVVGVMAG GVQIGVLLDANAPVSVMT+PLLKVVNSRLRE Sbjct 1 MTAVVEVPQPDVEGISQPQAVVVGVMAGAGVQIGVLLDANAPVSVMTEPLLKVVNSRLRE 60 Query 61 LGEAPLEATGRGRWALCLVDGAPLRATQSLTEQDVYDGDRLWIRFIADTERRSQVIEHIS 120 LGE PLEATGRGRWALCLVDG+PLRATQSL+EQDVYDGDRLWIRFI DTE RSQVIEHIS Sbjct 61 LGETPLEATGRGRWALCLVDGSPLRATQSLSEQDVYDGDRLWIRFIPDTEHRSQVIEHIS 120 Query 121 TAVASDLSKRFARIDPIVAVQVGASMVATGVVLATGVLGWWRWHHNTWLTTIYTAVIGVL 180 TAVA++LSKRFA IDP+VAVQVGA+MVA GV A+G+LGWWRWHHN+WL T+Y VIGVL Sbjct 121 TAVAANLSKRFAAIDPVVAVQVGATMVAVGVTAASGLLGWWRWHHNSWLPTVYAGVIGVL 180 Query 181 VLAVAMLLLMRAKTDADRRVADIMLMSAIMPVTVAAAAAPPGPVGSPQAVLGFGVLTVAA 240 +L V++LLLMRA T +RRV D +L+S++ PV+VAAAAAPPG VGSPQAVLGFGVLT+AA Sbjct 181 MLGVSVLLLMRATTQQERRVGDTLLLSSLAPVSVAAAAAPPGGVGSPQAVLGFGVLTIAA 240 Query 241 ALALRFTGRRLGIYTTIVIIGALTMLAALARMVAATSAVTLLSSLLLICVVAYHAAPALS 300 LALRFTGRRL IYT IV + A+ LAALARMVA T AVTLL+ ++L+ V+ Y +APA+S Sbjct 241 VLALRFTGRRLAIYTAIVTVSAIAALAALARMVAMTGAVTLLTCVVLVSVLIYQSAPAIS 300 Query 301 RRLAGIRLPVFPSATSRWVFEARPDLPTTVVVSGGSAPVLEGPSSVRDVLLQAERARSFL 360 RRLAGIRLPVFPSATSRWVFEARPDLPTTVV S G PVLEGP+SVRDVL QAERARSFL Sbjct 301 RRLAGIRLPVFPSATSRWVFEARPDLPTTVVRSDGGPPVLEGPASVRDVLTQAERARSFL 360 Query 361 SGLLTGLGVMVVVCMTSLCDPHTGQRWLPLILAGFTSGFLLLRGRSYVDRWQSITLAGTA 420 SGLL GLGV++VV +T+L DP TGQRWLP++LAGF +GFLLLRGRSYVDRWQ+ITLAGTA Sbjct 361 SGLLIGLGVLMVVSLTALSDPRTGQRWLPVLLAGFCAGFLLLRGRSYVDRWQAITLAGTA 420 Query 421 VIIAAAVCVRYALELSSPLAVSIVAAILVLLPAAGMAAAAHVPHTIYSPLFRKFVEWIEY 480 V+I AV VRYAL L SPLAVSI AAILVL+P AG+ +AA VP+T+YSPLFRKFVEWIEY Sbjct 421 VLIVGAVVVRYALVLQSPLAVSISAAILVLVPVAGLTSAAVVPNTVYSPLFRKFVEWIEY 480 Query 481 LCLMPIFPLALWLMNVYAAIRYR 503 LCLMPIFPLALWLMNVYAAIRYR Sbjct 481 LCLMPIFPLALWLMNVYAAIRYR 503 >gi|41407608|ref|NP_960444.1| hypothetical protein MAP1510 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395961|gb|AAS03827.1| hypothetical protein MAP_1510 [Mycobacterium avium subsp. paratuberculosis K-10] Length=503 Score = 758 bits (1958), Expect = 0.0, Method: Compositional matrix adjust. Identities = 398/503 (80%), Positives = 447/503 (89%), Gaps = 0/503 (0%) Query 1 MTAVADAPQADIEGVASPQAVVVGVMAGEGVQIGVLLDANAPVSVMTDPLLKVVNSRLRE 60 MTAV + PQ D+EG++ PQAVVVGVMAG GVQIGVLLDANAPVSVMT+PLLKVVNSRLRE Sbjct 1 MTAVVEVPQPDVEGISQPQAVVVGVMAGAGVQIGVLLDANAPVSVMTEPLLKVVNSRLRE 60 Query 61 LGEAPLEATGRGRWALCLVDGAPLRATQSLTEQDVYDGDRLWIRFIADTERRSQVIEHIS 120 LGE PLEATGR RWALCLVDG+PLRATQSL+EQDVYDGDRLWIRFI DTE RSQVIEHIS Sbjct 61 LGETPLEATGRVRWALCLVDGSPLRATQSLSEQDVYDGDRLWIRFIPDTEHRSQVIEHIS 120 Query 121 TAVASDLSKRFARIDPIVAVQVGASMVATGVVLATGVLGWWRWHHNTWLTTIYTAVIGVL 180 TAVA++LSKRFA IDP+VAVQVGA+MVA GV A+G+LGWWRWHHN+WL T+Y VIGVL Sbjct 121 TAVAANLSKRFAAIDPVVAVQVGATMVAVGVTAASGLLGWWRWHHNSWLPTVYAGVIGVL 180 Query 181 VLAVAMLLLMRAKTDADRRVADIMLMSAIMPVTVAAAAAPPGPVGSPQAVLGFGVLTVAA 240 +L V++LLLMRA T +RRV D +L+S++ PV+VAAAAAPPG VGSPQAVLGFGVLT+AA Sbjct 181 MLGVSVLLLMRATTQQERRVGDTLLLSSLAPVSVAAAAAPPGGVGSPQAVLGFGVLTIAA 240 Query 241 ALALRFTGRRLGIYTTIVIIGALTMLAALARMVAATSAVTLLSSLLLICVVAYHAAPALS 300 LALRFTGRRL IYT IV + A+ LAALARMVA T AVTLL+ ++L+ V+ Y +APA+S Sbjct 241 VLALRFTGRRLAIYTAIVTVSAIAALAALARMVAMTGAVTLLTCVVLVSVLIYQSAPAIS 300 Query 301 RRLAGIRLPVFPSATSRWVFEARPDLPTTVVVSGGSAPVLEGPSSVRDVLLQAERARSFL 360 RRLAGIRLPVFPSATSRWVFEARPDLPTTVV S G PVLEGP+SVRDVL QAERARSFL Sbjct 301 RRLAGIRLPVFPSATSRWVFEARPDLPTTVVRSDGGPPVLEGPASVRDVLTQAERARSFL 360 Query 361 SGLLTGLGVMVVVCMTSLCDPHTGQRWLPLILAGFTSGFLLLRGRSYVDRWQSITLAGTA 420 SGLL GLGV++VV +T+L DP TGQRWLP++LAGF +GFLLLRGRSYVDRWQ+ITLAGTA Sbjct 361 SGLLIGLGVLMVVSLTALSDPRTGQRWLPVLLAGFCAGFLLLRGRSYVDRWQAITLAGTA 420 Query 421 VIIAAAVCVRYALELSSPLAVSIVAAILVLLPAAGMAAAAHVPHTIYSPLFRKFVEWIEY 480 V+I AV VRYAL L SPLAVSI AAILVL+P AG+ +AA VP+T+YSPLFRKFVEWIEY Sbjct 421 VLIVGAVVVRYALVLQSPLAVSISAAILVLVPVAGLTSAAVVPNTVYSPLFRKFVEWIEY 480 Query 481 LCLMPIFPLALWLMNVYAAIRYR 503 LCLMPIFPLALWLMNVYAAIRYR Sbjct 481 LCLMPIFPLALWLMNVYAAIRYR 503 >gi|336457559|gb|EGO36564.1| type VII secretion integral membrane protein EccD [Mycobacterium avium subsp. paratuberculosis S397] Length=503 Score = 756 bits (1952), Expect = 0.0, Method: Compositional matrix adjust. Identities = 397/503 (79%), Positives = 446/503 (89%), Gaps = 0/503 (0%) Query 1 MTAVADAPQADIEGVASPQAVVVGVMAGEGVQIGVLLDANAPVSVMTDPLLKVVNSRLRE 60 MTAV + PQ D+EG++ PQAVVVGVMAG GVQIGVLLDANAPVSVMT+PLLKVVNSRLRE Sbjct 1 MTAVVEVPQPDVEGISQPQAVVVGVMAGAGVQIGVLLDANAPVSVMTEPLLKVVNSRLRE 60 Query 61 LGEAPLEATGRGRWALCLVDGAPLRATQSLTEQDVYDGDRLWIRFIADTERRSQVIEHIS 120 LGE PLEATGR RWALCLVDG+PLRATQSL+EQDVYDGDRLWIRFI DTE RSQVIEHIS Sbjct 61 LGETPLEATGRVRWALCLVDGSPLRATQSLSEQDVYDGDRLWIRFIPDTEHRSQVIEHIS 120 Query 121 TAVASDLSKRFARIDPIVAVQVGASMVATGVVLATGVLGWWRWHHNTWLTTIYTAVIGVL 180 TAVA++LSKRFA IDP+VAVQVGA+MVA GV A+G+LGWWRWHHN+WL T+Y VIGVL Sbjct 121 TAVAANLSKRFAAIDPVVAVQVGATMVAVGVTAASGLLGWWRWHHNSWLPTVYAGVIGVL 180 Query 181 VLAVAMLLLMRAKTDADRRVADIMLMSAIMPVTVAAAAAPPGPVGSPQAVLGFGVLTVAA 240 +L V++LLLMRA T +RRV D +L+S++ PV+VAAAAAPPG VGSPQAVLGFGVLT+AA Sbjct 181 MLGVSVLLLMRATTQQERRVGDTLLLSSLAPVSVAAAAAPPGGVGSPQAVLGFGVLTIAA 240 Query 241 ALALRFTGRRLGIYTTIVIIGALTMLAALARMVAATSAVTLLSSLLLICVVAYHAAPALS 300 LALRFTGRRL IYT IV + A+ LAALARMVA T AVTLL+ ++L+ V+ Y +APA+S Sbjct 241 VLALRFTGRRLAIYTAIVTVSAIAALAALARMVAMTGAVTLLTCVVLVSVLIYQSAPAIS 300 Query 301 RRLAGIRLPVFPSATSRWVFEARPDLPTTVVVSGGSAPVLEGPSSVRDVLLQAERARSFL 360 RRLAGIRLPVFPSATSRWVFEARPDLPTTVV S G PVLEGP+SVRDVL QAERARSFL Sbjct 301 RRLAGIRLPVFPSATSRWVFEARPDLPTTVVRSDGGPPVLEGPASVRDVLTQAERARSFL 360 Query 361 SGLLTGLGVMVVVCMTSLCDPHTGQRWLPLILAGFTSGFLLLRGRSYVDRWQSITLAGTA 420 SGLL GLGV++VV +T+L DP TGQRWLP++LAGF +GFLLLRGRSYVDRWQ+ITLAGTA Sbjct 361 SGLLIGLGVLMVVSLTALSDPRTGQRWLPVLLAGFCAGFLLLRGRSYVDRWQAITLAGTA 420 Query 421 VIIAAAVCVRYALELSSPLAVSIVAAILVLLPAAGMAAAAHVPHTIYSPLFRKFVEWIEY 480 V+I AV VRYAL L SPLAVSI AAILVL+P AG+ +AA VP+T+YSPLFRK VEWIEY Sbjct 421 VLIVGAVVVRYALVLQSPLAVSISAAILVLVPVAGLTSAAVVPNTVYSPLFRKLVEWIEY 480 Query 481 LCLMPIFPLALWLMNVYAAIRYR 503 LCLMPIFPLALWLMNVYAAIRYR Sbjct 481 LCLMPIFPLALWLMNVYAAIRYR 503 >gi|342861301|ref|ZP_08717949.1| secretion protein Snm4 [Mycobacterium colombiense CECT 3035] gi|342131201|gb|EGT84482.1| secretion protein Snm4 [Mycobacterium colombiense CECT 3035] Length=478 Score = 729 bits (1882), Expect = 0.0, Method: Compositional matrix adjust. Identities = 375/478 (79%), Positives = 426/478 (90%), Gaps = 0/478 (0%) Query 26 MAGEGVQIGVLLDANAPVSVMTDPLLKVVNSRLRELGEAPLEATGRGRWALCLVDGAPLR 85 MAG GVQIGVLLD+NAPVSVMT+PLLKVVNSRLRELGE PLEA+GRGRWALCLVDG+PLR Sbjct 1 MAGAGVQIGVLLDSNAPVSVMTEPLLKVVNSRLRELGETPLEASGRGRWALCLVDGSPLR 60 Query 86 ATQSLTEQDVYDGDRLWIRFIADTERRSQVIEHISTAVASDLSKRFARIDPIVAVQVGAS 145 ATQSL+EQDVYDGDRLWIRFI DTE RSQVIEHISTAVA+DLSKRFA IDP++AVQVGA+ Sbjct 61 ATQSLSEQDVYDGDRLWIRFIPDTEHRSQVIEHISTAVAADLSKRFAAIDPVIAVQVGAT 120 Query 146 MVATGVVLATGVLGWWRWHHNTWLTTIYTAVIGVLVLAVAMLLLMRAKTDADRRVADIML 205 MVA GV A G+LGWWRWHHN+WL T+Y VIG + L VA+LLLMRA T +RRVAD ML Sbjct 121 MVAVGVTTAAGLLGWWRWHHNSWLPTVYAGVIGAVALGVALLLLMRAHTQQERRVADTML 180 Query 206 MSAIMPVTVAAAAAPPGPVGSPQAVLGFGVLTVAAALALRFTGRRLGIYTTIVIIGALTM 265 +S+++P+ +AAA+APPG VGSP AVLGFGVLT+AA LALRFTGRRL IYT +V + + Sbjct 181 LSSLVPIAIAAASAPPGGVGSPHAVLGFGVLTIAAILALRFTGRRLAIYTAMVTVSLIAA 240 Query 266 LAALARMVAATSAVTLLSSLLLICVVAYHAAPALSRRLAGIRLPVFPSATSRWVFEARPD 325 +AALARMVA TSAVTL + ++L+ V+ Y +APA+SRRLAGIRLPVFPSATSRWVFEARPD Sbjct 241 VAALARMVAMTSAVTLFTCVVLVSVMVYQSAPAISRRLAGIRLPVFPSATSRWVFEARPD 300 Query 326 LPTTVVVSGGSAPVLEGPSSVRDVLLQAERARSFLSGLLTGLGVMVVVCMTSLCDPHTGQ 385 LPTTVV S G PVLEGP+SVRDVL QAERARSFLSGLL GLGV+++V +T+L DPHTGQ Sbjct 301 LPTTVVRSDGGPPVLEGPASVRDVLTQAERARSFLSGLLIGLGVLMIVSLTALSDPHTGQ 360 Query 386 RWLPLILAGFTSGFLLLRGRSYVDRWQSITLAGTAVIIAAAVCVRYALELSSPLAVSIVA 445 RWLPL+LAGF++GFL+LRGRSYVDRWQ+ITLAGTAV+I AV +RYAL L SPLAVSI A Sbjct 361 RWLPLLLAGFSAGFLMLRGRSYVDRWQAITLAGTAVLIVGAVVLRYALVLQSPLAVSISA 420 Query 446 AILVLLPAAGMAAAAHVPHTIYSPLFRKFVEWIEYLCLMPIFPLALWLMNVYAAIRYR 503 AILVLLPAAG+ +AA VP+T+YSPLFRKFVEWIEYLCLMPIFPLALWLMNVYAAIRYR Sbjct 421 AILVLLPAAGLTSAAVVPNTVYSPLFRKFVEWIEYLCLMPIFPLALWLMNVYAAIRYR 478 >gi|254820296|ref|ZP_05225297.1| secretion protein Snm4 [Mycobacterium intracellulare ATCC 13950] Length=478 Score = 728 bits (1878), Expect = 0.0, Method: Compositional matrix adjust. Identities = 384/478 (81%), Positives = 429/478 (90%), Gaps = 0/478 (0%) Query 26 MAGEGVQIGVLLDANAPVSVMTDPLLKVVNSRLRELGEAPLEATGRGRWALCLVDGAPLR 85 MAG GVQIGVLLDANAPVSVMTDPLLKVVNSRLRELGEAPLEATGRGRWALCLVDG+PLR Sbjct 1 MAGTGVQIGVLLDANAPVSVMTDPLLKVVNSRLRELGEAPLEATGRGRWALCLVDGSPLR 60 Query 86 ATQSLTEQDVYDGDRLWIRFIADTERRSQVIEHISTAVASDLSKRFARIDPIVAVQVGAS 145 ATQSL+EQDVYDGDRLWIRFI DTE RSQVIEHISTAVA++LSKRFA IDP+VAVQVGAS Sbjct 61 ATQSLSEQDVYDGDRLWIRFIPDTEHRSQVIEHISTAVAANLSKRFAAIDPVVAVQVGAS 120 Query 146 MVATGVVLATGVLGWWRWHHNTWLTTIYTAVIGVLVLAVAMLLLMRAKTDADRRVADIML 205 MVA GV ATG+LGWWRWHHN+WL T+Y VIG L+L V++LLLMRA T +RRVAD ML Sbjct 121 MVAIGVTAATGLLGWWRWHHNSWLPTVYAGVIGALMLGVSLLLLMRATTLQERRVADTML 180 Query 206 MSAIMPVTVAAAAAPPGPVGSPQAVLGFGVLTVAAALALRFTGRRLGIYTTIVIIGALTM 265 +S++ PV+VAAAAAPPG VGSP AVLGFGVLT+AA LALRFTGRRL IYT IV + ++ Sbjct 181 LSSLAPVSVAAAAAPPGGVGSPHAVLGFGVLTIAAILALRFTGRRLSIYTAIVTVSSIAA 240 Query 266 LAALARMVAATSAVTLLSSLLLICVVAYHAAPALSRRLAGIRLPVFPSATSRWVFEARPD 325 +AALARMVA TSAVTLL+ ++L+ V+ Y +APA+SRRLAGIRLPVFPSATSRWVFEARPD Sbjct 241 VAALARMVAMTSAVTLLTCVVLVSVLIYQSAPAISRRLAGIRLPVFPSATSRWVFEARPD 300 Query 326 LPTTVVVSGGSAPVLEGPSSVRDVLLQAERARSFLSGLLTGLGVMVVVCMTSLCDPHTGQ 385 LPTTVV + G PVLEGP+SVRDVL QAERARSFLSGLL GLGV++VV +T+L DPHTGQ Sbjct 301 LPTTVVRNDGGPPVLEGPASVRDVLTQAERARSFLSGLLIGLGVLMVVSLTALSDPHTGQ 360 Query 386 RWLPLILAGFTSGFLLLRGRSYVDRWQSITLAGTAVIIAAAVCVRYALELSSPLAVSIVA 445 RWLP++LAGF++GFLLLRGRSYVDRWQ+ITLAGT V+I AV VRYAL L S LAVSI A Sbjct 361 RWLPVLLAGFSAGFLLLRGRSYVDRWQAITLAGTGVLIVGAVVVRYALVLQSSLAVSICA 420 Query 446 AILVLLPAAGMAAAAHVPHTIYSPLFRKFVEWIEYLCLMPIFPLALWLMNVYAAIRYR 503 AILVL+PAAG+ +AA VP+T+YSPLFRKFVEWIEYLCLMPIFPLALWLMNVYAAIRYR Sbjct 421 AILVLVPAAGLTSAAVVPNTVYSPLFRKFVEWIEYLCLMPIFPLALWLMNVYAAIRYR 478 >gi|254775395|ref|ZP_05216911.1| secretion protein Snm4 [Mycobacterium avium subsp. avium ATCC 25291] Length=478 Score = 726 bits (1875), Expect = 0.0, Method: Compositional matrix adjust. Identities = 381/478 (80%), Positives = 427/478 (90%), Gaps = 0/478 (0%) Query 26 MAGEGVQIGVLLDANAPVSVMTDPLLKVVNSRLRELGEAPLEATGRGRWALCLVDGAPLR 85 MAG GVQIGVLLDANAPVSVMT+PLLKVVNSRLRELGE PLEATGRGRWALCLVDG+PLR Sbjct 1 MAGAGVQIGVLLDANAPVSVMTEPLLKVVNSRLRELGETPLEATGRGRWALCLVDGSPLR 60 Query 86 ATQSLTEQDVYDGDRLWIRFIADTERRSQVIEHISTAVASDLSKRFARIDPIVAVQVGAS 145 ATQSL+EQDVYDGDRLWIRFI DTE RSQVIEHISTAVA++LSKRFA IDP+VAVQVGA+ Sbjct 61 ATQSLSEQDVYDGDRLWIRFIPDTEHRSQVIEHISTAVAANLSKRFAAIDPVVAVQVGAT 120 Query 146 MVATGVVLATGVLGWWRWHHNTWLTTIYTAVIGVLVLAVAMLLLMRAKTDADRRVADIML 205 MVA GV A+G+LGWWRWHHN+WL T+Y VIGVL+L V++LLLMRA T +RRV D +L Sbjct 121 MVAVGVTAASGLLGWWRWHHNSWLPTVYAGVIGVLMLGVSVLLLMRATTQQERRVGDTLL 180 Query 206 MSAIMPVTVAAAAAPPGPVGSPQAVLGFGVLTVAAALALRFTGRRLGIYTTIVIIGALTM 265 +S++ PV+VAAAAAPPG VGSPQAVLGFGVLT+AA LALRFTGRRL IYT IV + A+ Sbjct 181 LSSLAPVSVAAAAAPPGGVGSPQAVLGFGVLTIAAVLALRFTGRRLAIYTAIVTVSAIAA 240 Query 266 LAALARMVAATSAVTLLSSLLLICVVAYHAAPALSRRLAGIRLPVFPSATSRWVFEARPD 325 +AALARMVA T AVTLL+ ++L+ V+ Y +APA+SRRLAGIRLPVFPSATSRWVFEARPD Sbjct 241 VAALARMVAMTGAVTLLTCVVLVSVLIYQSAPAISRRLAGIRLPVFPSATSRWVFEARPD 300 Query 326 LPTTVVVSGGSAPVLEGPSSVRDVLLQAERARSFLSGLLTGLGVMVVVCMTSLCDPHTGQ 385 LPTTVV S G PVLEGP+SVRDVL QAERARSFLSGLL GLGV++VV +T+L DP TGQ Sbjct 301 LPTTVVRSDGGPPVLEGPASVRDVLTQAERARSFLSGLLIGLGVLMVVSLTALSDPRTGQ 360 Query 386 RWLPLILAGFTSGFLLLRGRSYVDRWQSITLAGTAVIIAAAVCVRYALELSSPLAVSIVA 445 RWLP++LAGF +GFLLLRGRSYVDRWQ+ITLAGTAV+I AV VRYAL L SPLAVSI A Sbjct 361 RWLPVLLAGFCAGFLLLRGRSYVDRWQAITLAGTAVLIVGAVVVRYALVLQSPLAVSISA 420 Query 446 AILVLLPAAGMAAAAHVPHTIYSPLFRKFVEWIEYLCLMPIFPLALWLMNVYAAIRYR 503 AILVL+P AG+ +AA VP+T+YSPLFRKFVEWIEYLCLMPIFPLALWLMNVYAAIRYR Sbjct 421 AILVLVPVAGLTSAAVVPNTVYSPLFRKFVEWIEYLCLMPIFPLALWLMNVYAAIRYR 478 >gi|15827809|ref|NP_302072.1| hypothetical protein ML1539 [Mycobacterium leprae TN] gi|221230286|ref|YP_002503702.1| hypothetical protein MLBr_01539 [Mycobacterium leprae Br4923] gi|13093361|emb|CAC30490.1| probable membrane protein [Mycobacterium leprae] gi|219933393|emb|CAR71634.1| probable membrane protein [Mycobacterium leprae Br4923] Length=503 Score = 698 bits (1801), Expect = 0.0, Method: Compositional matrix adjust. Identities = 387/503 (77%), Positives = 435/503 (87%), Gaps = 0/503 (0%) Query 1 MTAVADAPQADIEGVASPQAVVVGVMAGEGVQIGVLLDANAPVSVMTDPLLKVVNSRLRE 60 MTAVADAP+ DIEG +SP+ VVVG++AGEG QI VLLDANAPVSVMTDPLLKV+NSRL E Sbjct 1 MTAVADAPRTDIEGTSSPRVVVVGIVAGEGAQISVLLDANAPVSVMTDPLLKVINSRLCE 60 Query 61 LGEAPLEATGRGRWALCLVDGAPLRATQSLTEQDVYDGDRLWIRFIADTERRSQVIEHIS 120 LGE LE TGRGRWALCL+DG PL TQSLTEQDVYDGDRLWIRFIADTERRSQVIEHIS Sbjct 61 LGEGTLEPTGRGRWALCLIDGTPLWPTQSLTEQDVYDGDRLWIRFIADTERRSQVIEHIS 120 Query 121 TAVASDLSKRFARIDPIVAVQVGASMVATGVVLATGVLGWWRWHHNTWLTTIYTAVIGVL 180 TAV+++LSKRFA ID IVAVQVGA MVATGV+ ++ +L WWRWHH WL+ IY VI +L Sbjct 121 TAVSANLSKRFAAIDSIVAVQVGALMVATGVLASSVLLVWWRWHHGFWLSVIYATVIALL 180 Query 181 VLAVAMLLLMRAKTDADRRVADIMLMSAIMPVTVAAAAAPPGPVGSPQAVLGFGVLTVAA 240 +L ++ L+LMRA T DRR DIML+S I PVT AAAAAPPGP+GSP AV+GFGV +AA Sbjct 181 ILVMSTLVLMRATTREDRRAGDIMLLSGIAPVTAAAAAAPPGPLGSPHAVMGFGVFAIAA 240 Query 241 ALALRFTGRRLGIYTTIVIIGALTMLAALARMVAATSAVTLLSSLLLICVVAYHAAPALS 300 LALRFTGR+L IYT ++ I + +A+LARMVA TSAVTLLS ++L CV+ YH APALS Sbjct 241 MLALRFTGRQLSIYTAMITISVVVAIASLARMVAMTSAVTLLSCVMLACVLLYHCAPALS 300 Query 301 RRLAGIRLPVFPSATSRWVFEARPDLPTTVVVSGGSAPVLEGPSSVRDVLLQAERARSFL 360 RRLAGIRLPVFPSATSRWVFEARPDLP TVV S G PVLEGP+SVRDVLLQ+ERARS+L Sbjct 301 RRLAGIRLPVFPSATSRWVFEARPDLPNTVVRSDGGPPVLEGPASVRDVLLQSERARSYL 360 Query 361 SGLLTGLGVMVVVCMTSLCDPHTGQRWLPLILAGFTSGFLLLRGRSYVDRWQSITLAGTA 420 SGLL GLGV++VV +T+L +PH GQRWLPL+LAGFTSGFLLLRGRSYVDRWQ+ITLA TA Sbjct 361 SGLLLGLGVLLVVSLTALSNPHVGQRWLPLLLAGFTSGFLLLRGRSYVDRWQAITLAATA 420 Query 421 VIIAAAVCVRYALELSSPLAVSIVAAILVLLPAAGMAAAAHVPHTIYSPLFRKFVEWIEY 480 V+I AAV VRYAL LSSPLAVSI AAILVLLPAAG+ AAA VP+TIYSPLFRK VEWIEY Sbjct 421 VLIVAAVVVRYALVLSSPLAVSIGAAILVLLPAAGLIAAAVVPNTIYSPLFRKLVEWIEY 480 Query 481 LCLMPIFPLALWLMNVYAAIRYR 503 LCL+PIFPLALWLM+VY AIRYR Sbjct 481 LCLVPIFPLALWLMDVYTAIRYR 503 >gi|333990538|ref|YP_004523152.1| hypothetical protein JDM601_1898 [Mycobacterium sp. JDM601] gi|333486506|gb|AEF35898.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=504 Score = 563 bits (1450), Expect = 3e-158, Method: Compositional matrix adjust. Identities = 314/504 (63%), Positives = 393/504 (78%), Gaps = 1/504 (0%) Query 1 MTAVADAPQADIE-GVASPQAVVVGVMAGEGVQIGVLLDANAPVSVMTDPLLKVVNSRLR 59 MT +APQ E ++P+AVVVGVMAG+GVQIG LLDA+APVSVM DPLLKV+N RL Sbjct 1 MTTAIEAPQPGGEVATSAPRAVVVGVMAGDGVQIGTLLDADAPVSVMLDPLLKVINGRLA 60 Query 60 ELGEAPLEATGRGRWALCLVDGAPLRATQSLTEQDVYDGDRLWIRFIADTERRSQVIEHI 119 EL E L+A GRGRW LCLVDG LR QSLTEQDVYDGDRLW+RFI D ERRS VIEHI Sbjct 61 ELDEPTLQADGRGRWVLCLVDGTALRPNQSLTEQDVYDGDRLWLRFIEDRERRSPVIEHI 120 Query 120 STAVASDLSKRFARIDPIVAVQVGASMVATGVVLATGVLGWWRWHHNTWLTTIYTAVIGV 179 STAV+ +L+KRFA ++ + AV+VG S +A GV+LATG+L WR H+ WLT ++A + + Sbjct 121 STAVSVNLAKRFAPVNAVTAVRVGVSTLALGVLLATGLLAAWRVQHDNWLTAGFSAGLAL 180 Query 180 LVLAVAMLLLMRAKTDADRRVADIMLMSAIMPVTVAAAAAPPGPVGSPQAVLGFGVLTVA 239 LVL A L+L++A+ +DR D++L S ++P+ VAAAAA PG VG+ QA LGFGV +A Sbjct 181 LVLIAAALILIQARNASDRWAGDMLLSSGLVPLVVAAAAAVPGEVGAAQAALGFGVAGIA 240 Query 240 AALALRFTGRRLGIYTTIVIIGALTMLAALARMVAATSAVTLLSSLLLICVVAYHAAPAL 299 A +R TGR+L Y+ + +I A M A + RM+ T AVTL++ + L CV+AY AP+L Sbjct 241 ALSVIRLTGRQLAAYSAVTVISAAVMFAGVLRMLFLTGAVTLMACVYLACVLAYQWAPSL 300 Query 300 SRRLAGIRLPVFPSATSRWVFEARPDLPTTVVVSGGSAPVLEGPSSVRDVLLQAERARSF 359 SR LAG+RLPVFPSATSRWVFEARPDLPTTVV G+AP LEGP SVR+V+L+AERARSF Sbjct 301 SRWLAGLRLPVFPSATSRWVFEARPDLPTTVVSKPGAAPSLEGPESVREVVLRAERARSF 360 Query 360 LSGLLTGLGVMVVVCMTSLCDPHTGQRWLPLILAGFTSGFLLLRGRSYVDRWQSITLAGT 419 L+GLLTGLGV++ VC+T LCDPH+ + WLPL+LAG T+GFL+LRGRS+ DRWQ++T+ T Sbjct 361 LTGLLTGLGVLIAVCVTGLCDPHSDRSWLPLLLAGLTAGFLVLRGRSFRDRWQAVTVTLT 420 Query 420 AVIIAAAVCVRYALELSSPLAVSIVAAILVLLPAAGMAAAAHVPHTIYSPLFRKFVEWIE 479 ++I AAV VR+ + L +P + + AA+LVL+P G+ +A VP+TIYSPLFRKFVEWIE Sbjct 421 GLVIVAAVVVRFVVVLWTPTTLVVGAAVLVLVPMFGLLSAVIVPNTIYSPLFRKFVEWIE 480 Query 480 YLCLMPIFPLALWLMNVYAAIRYR 503 YLCLMP+FPLALWLMN Y AIRYR Sbjct 481 YLCLMPLFPLALWLMNTYEAIRYR 504 >gi|240169215|ref|ZP_04747874.1| hypothetical protein MkanA1_07874 [Mycobacterium kansasii ATCC 12478] gi|296165328|ref|ZP_06847870.1| secretion protein Snm4 [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295899344|gb|EFG78808.1| secretion protein Snm4 [Mycobacterium parascrofulaceum ATCC BAA-614] Length=504 Score = 380 bits (976), Expect = 3e-103, Method: Compositional matrix adjust. Identities = 239/498 (48%), Positives = 320/498 (65%), Gaps = 1/498 (0%) Query 6 DAPQADIEGVASPQAVVVGVMAGEGVQIGVLLDANAPVSVMTDPLLKVVNSRLRELGEAP 65 D P A P V+V V+AG +IGV+LDA A VSV L+ +VN+RL ELGE Sbjct 8 DNPVTAAAAPALPDRVLVAVIAGA-TKIGVVLDATASVSVQLAALVDLVNTRLGELGEPA 66 Query 66 LEATGRGRWALCLVDGAPLRATQSLTEQDVYDGDRLWIRFIADTERRSQVIEHISTAVAS 125 L A RGRW LC VDG+PL+ SL Q V DG RLW+RF ADTE R V+EH+++AVA+ Sbjct 67 LTAGPRGRWTLCWVDGSPLKPGLSLAAQGVSDGTRLWLRFAADTEARINVVEHVTSAVAA 126 Query 126 DLSKRFARIDPIVAVQVGASMVATGVVLATGVLGWWRWHHNTWLTTIYTAVIGVLVLAVA 185 +LS+R+ + P+ A +VGA MV GV+ AT +LG WR+ H W IY + L+LA A Sbjct 127 ELSRRWPAVTPVWAARVGAGMVVAGVLAATALLGRWRYGHLGWAPAIYCGGLAALLLAAA 186 Query 186 MLLLMRAKTDADRRVADIMLMSAIMPVTVAAAAAPPGPVGSPQAVLGFGVLTVAAALALR 245 ++L R + R V D +L++ +P+ V AAAA PGP+G+P A LG VAA L +R Sbjct 187 AIILARQASRLARGVGDTLLLTGCLPLAVGAAAAVPGPMGAPHAALGLASALVAAVLVVR 246 Query 246 FTGRRLGIYTTIVIIGALTMLAALARMVAATSAVTLLSSLLLICVVAYHAAPALSRRLAG 305 FTGR + + TT+++ A+ ++ RMV TSA LL+ +LL+ ++ H +P ++R +AG Sbjct 247 FTGRHIALGTTVIVTAAVGVVVGSVRMVLVTSAPILLAVVLLVSLIGMHVSPTVARWVAG 306 Query 306 IRLPVFPSATSRWVFEARPDLPTTVVVSGGSAPVLEGPSSVRDVLLQAERARSFLSGLLT 365 IRLPVFPSA+ +W+FEARPDLP V+ G GP SVR+V + +RA S+L+GLL Sbjct 307 IRLPVFPSASGQWIFEARPDLPADHAVASGQVATFAGPESVREVTVATDRAHSYLTGLLV 366 Query 366 GLGVMVVVCMTSLCDPHTGQRWLPLILAGFTSGFLLLRGRSYVDRWQSITLAGTAVIIAA 425 +VVVC LCDPH +RWLPL+LAG + +LLRGRS+ DRWQ+ A AV + Sbjct 367 ATTGLVVVCSVGLCDPHAPRRWLPLVLAGLVAVAVLLRGRSFTDRWQATIFALAAVALVI 426 Query 426 AVCVRYALELSSPLAVSIVAAILVLLPAAGMAAAAHVPHTIYSPLFRKFVEWIEYLCLMP 485 V RY L L + A+ + +V +P AG+ A VP+ Y+P FRK VEW+EY+CL Sbjct 427 GVAGRYVLGLWTMPALLAGVSAMVAVPVAGLVAGVVVPNRFYTPTFRKIVEWVEYVCLTG 486 Query 486 IFPLALWLMNVYAAIRYR 503 IFPLA WLM V AAIRYR Sbjct 487 IFPLAFWLMGVLAAIRYR 504 >gi|339294730|gb|AEJ46841.1| hypothetical membrane protein [Mycobacterium tuberculosis CCDC5079] Length=325 Score = 367 bits (942), Expect = 3e-99, Method: Compositional matrix adjust. Identities = 197/211 (94%), Positives = 200/211 (95%), Gaps = 0/211 (0%) Query 23 VGVMAGEGVQIGVLLDANAPVSVMTDPLLKVVNSRLRELGEAPLEATGRGRWALCLVDGA 82 +GVMAGEGVQIGVLLDANAPVSVMTDPLLKVVNSRLRELGEAPLEATGRGRWALCLVDGA Sbjct 1 MGVMAGEGVQIGVLLDANAPVSVMTDPLLKVVNSRLRELGEAPLEATGRGRWALCLVDGA 60 Query 83 PLRATQSLTEQDVYDGDRLWIRFIADTERRSQVIEHISTAVASDLSKRFARIDPIVAVQV 142 PLRATQSLTEQDVYDGDRLWIRFIADTERRSQVIEHISTAVASDLSKRFARIDPIVAVQV Sbjct 61 PLRATQSLTEQDVYDGDRLWIRFIADTERRSQVIEHISTAVASDLSKRFARIDPIVAVQV 120 Query 143 GASMVATGVVLATGVLGWWRWHHNTWLTTIYTAVIGVLVLAVAMLLLMRAKTDADRRVAD 202 GASMVATGVVLATGVLGWWRWHHNTWLTTIYTAVIGVLVLAVAMLLLMRAKTDADRRVAD Sbjct 121 GASMVATGVVLATGVLGWWRWHHNTWLTTIYTAVIGVLVLAVAMLLLMRAKTDADRRVAD 180 Query 203 IMLMSAIMPVTVAAAAAPPGPVGSPQAVLGF 233 IMLMSAIMPVTVA + P P G P +G Sbjct 181 IMLMSAIMPVTVAGGSGPARPGGLPAGRVGL 211 >gi|339294731|gb|AEJ46842.1| hypothetical membrane protein [Mycobacterium tuberculosis CCDC5079] Length=158 Score = 317 bits (811), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 157/158 (99%), Positives = 158/158 (100%), Gaps = 0/158 (0%) Query 346 VRDVLLQAERARSFLSGLLTGLGVMVVVCMTSLCDPHTGQRWLPLILAGFTSGFLLLRGR 405 +RDVLLQAERARSFLSGLLTGLGVMVVVCMTSLCDPHTGQRWLPLILAGFTSGFLLLRGR Sbjct 1 MRDVLLQAERARSFLSGLLTGLGVMVVVCMTSLCDPHTGQRWLPLILAGFTSGFLLLRGR 60 Query 406 SYVDRWQSITLAGTAVIIAAAVCVRYALELSSPLAVSIVAAILVLLPAAGMAAAAHVPHT 465 SYVDRWQSITLAGTAVIIAAAVCVRYALELSSPLAVSIVAAILVLLPAAGMAAAAHVPHT Sbjct 61 SYVDRWQSITLAGTAVIIAAAVCVRYALELSSPLAVSIVAAILVLLPAAGMAAAAHVPHT 120 Query 466 IYSPLFRKFVEWIEYLCLMPIFPLALWLMNVYAAIRYR 503 IYSPLFRKFVEWIEYLCLMPIFPLALWLMNVYAAIRYR Sbjct 121 IYSPLFRKFVEWIEYLCLMPIFPLALWLMNVYAAIRYR 158 >gi|296164030|ref|ZP_06846653.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295900578|gb|EFG79961.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=498 Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 152/492 (31%), Positives = 232/492 (48%), Gaps = 20/492 (4%) Query 18 PQAVVVGVMAGEGVQIGVLLDANAPVSVMTDPLLKVVNSRLRELGEAPLEATGRGRWALC 77 P+ V ++ G+ I +L A + + + L+ VN+ L++ G APL+ T + LC Sbjct 14 PRLCKVHLLVGDDTLIDYVLPAGVALIAVIEDLIPRVNAILKDRGRAPLDDTLT--FQLC 71 Query 78 LVDGAPLRATQSLTEQDVYDGDRLWIRFIADTERRSQVIEHISTAVASDLSKRFARIDPI 137 D PL +SL + VYDGD L + TER + VIE +STA+A ++FA +D Sbjct 72 RADATPLDPQRSLDDSRVYDGDLLCLLPTDATERFAPVIEEVSTALARSARQQFATVDVT 131 Query 138 VAVQVGASMVATGVVLATGVLGWWRWHHNTWLTTIYTAVIGVLVLAVAMLLLMRAKTDAD 197 VA +V + A V A +L W + WL + + + L V+ RA+ + Sbjct 132 VARRVAGGLFAALVAWAEVMLAQLWWQQHGWLPAAVSWGLAAVFL-VSARAATRARDEQR 190 Query 198 RRVADIMLMSAIMPVTVAAAAAPPGPVGSPQAVLGFGVLTVAAALALRFTGRRLGIYTTI 257 RR AD ++ SA++ AA + PGP G V + A TGR L ++ + Sbjct 191 RRSADFLVWSALICAGAGAAMSVPGPPGGWHVVAATATVLAGVAALTMLTGRYLTVFAGM 250 Query 258 VIIG-----ALTMLAALARMVAATSAVTLLSSLLLICVVAYHAAPALSRRLAGIRLPVFP 312 ++G + A+ R++ A AV L + L++ A ++ AG+ P FP Sbjct 251 AVVGLSAGAVAAIHASGWRVLPAHLAVVFLVADLVLVTFAT----SIGIVGAGVPGPWFP 306 Query 313 SATSRWVFEARPDLPTTVVVSGGSAPVLE-GPSSVRDVLLQAERARSFLSGLLTGLGVMV 371 S T+R VFE R V +PV G +V + A R + ++GLL G V++ Sbjct 307 SVTNRGVFETREGAALNTV-----SPVERPGNETVEQIATWARRGTAIVTGLLAGGAVVL 361 Query 372 VVCMTSLCDPHTGQRWLPLILAGFTSGFLLLRGRSYVDRWQSITLAGTAVIIAAAVCVRY 431 V P TG W L LLR RS+VDR QS+ LA AV+ A V RY Sbjct 362 VAAARYAVMPETGGGWRFLAFTLGICAIFLLRARSFVDRNQSVMLAVGAVVAVAVVIGRY 421 Query 432 AL--ELSSPLAVSIVAAILVLLPAAGMAAAAHVPHTIYSPLFRKFVEWIEYLCLMPIFPL 489 A +SP+ I ++L AG+ A VP+ S + VE EY+ L+ + P Sbjct 422 ASAPNPASPVVTLICVGAALMLAGAGLLGALVVPNARISAPVNRAVEVSEYILLIFVVPW 481 Query 490 ALWLMNVYAAIR 501 A+WL+N+ +R Sbjct 482 AIWLLNLLWVVR 493 >gi|296165447|ref|ZP_06847983.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295899187|gb|EFG78657.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=500 Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 142/515 (28%), Positives = 227/515 (45%), Gaps = 27/515 (5%) Query 1 MTAVADAPQADIEGVASPQAVVVGVMAGEGVQIGVLLDANAPVSVMTDPLLKVVNSRLRE 60 MTA AD P A P + V ++ G+ QI +LL A P++ + +P +N RL+ Sbjct 1 MTATADKPAATAAETLVPPSSRVSLLVGDN-QIDLLLPAAVPLAKLVEPTRDTINRRLKS 59 Query 61 LGEAPLEATGRGRWALCLVDGAPLRATQ-SLTEQDVYDGDRLWIRFIADTERRSQVIEHI 119 +G L G + G + + + SL Q V D + L A +R IE++ Sbjct 60 IGAKELPG---GAFVFARAAGMTMLSGKLSLAAQGVNDAELLAFIPAASAQRYEPNIENV 116 Query 120 STAVASDLSKRFARIDPIVAVQVGASMVATGVVLATGVLGWWRWHH-NTWLTTIYTAVIG 178 S A+A + F + + A +V ++ + A ++ RW WL + G Sbjct 117 SAAIAKWAKQHFPAVTALDAARVAVALSLVALSAAALLVWRLRWASAGGWLAPT---IFG 173 Query 179 VLVLAVAMLLLMRAKTDADRRVADIMLMSAIMPVTVAAAAAPPGPV-GSPQAVLGFGVLT 237 V L VA ++ ++ ADR + + I + A PPG G+P AVL GV Sbjct 174 VTALVVAGAAVLASRLGADRFITAATSWAVIAALVATGATTPPGAHPGAPHAVLATGVAL 233 Query 238 VAAALALRFTGRRLGIYTTIVIIGALTMLAALARMVAATSAVTLLSSLLLICVVAYHAAP 297 +AAA + TGR TT+V + A + A RM A + +L+ + AAP Sbjct 234 IAAAALGKLTGRYWVAVTTMVTVSAAGLGCAATRMFFAVPGQRIAVVVLVGVLTVSLAAP 293 Query 298 ALSRRLAGIRLPVFPSATSRWVFEARPDLPTTVVVSGGSAPVLEGPSSVRDVLLQAE--- 354 + RRLA + F S T + ++E P P + +PV + P RDV L E Sbjct 294 GIGRRLARVPRQSFESITGKDMYERSPHDPEDTI-----SPVADSP---RDVTLTGEQVG 345 Query 355 ----RARSFLSGLLTGLGVMVVVCMTSLCDPHTGQRWLPLILAGFTSGFLLLRGRSYVDR 410 R+ L GLL G + + + P G +W + ++ + +LR R++ DR Sbjct 346 EVALRSNRVLMGLLLGTALTQIAASWAAIHPGVGTQWTFVAVSSCIALITVLRARAFRDR 405 Query 411 WQSITLAGTAVIIAAAVCVRYALELS--SPLAVSIVAAILVLLPAAGMAAAAHVPHTIYS 468 +ITL A + A+ Y L + S AV A +V + A + A A VP ++S Sbjct 406 RHAITLVVGAALSLFAIPTHYGLAANPGSTAAVLTAAGAVVGIALAALLAGAIVPTHMFS 465 Query 469 PLFRKFVEWIEYLCLMPIFPLALWLMNVYAAIRYR 503 R+ VE+ EY+ + A W +++ +RY Sbjct 466 EPVREIVEYAEYVATTVVVVFAAWTIDLIQFVRYH 500 >gi|119855165|ref|YP_935770.1| hypothetical protein Mkms_5780 [Mycobacterium sp. KMS] gi|119697883|gb|ABL94955.1| protein of unknown function DUF571 [Mycobacterium sp. KMS] Length=505 Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 145/498 (30%), Positives = 228/498 (46%), Gaps = 30/498 (6%) Query 18 PQAVVVGVMAGEGVQIGVLLDANAPVSVMTDPLLKVVNSRLRELGEAPLEATGRGRWALC 77 P + V ++ G+ QI ++L A P+S +TD L VN LR GE L G + Sbjct 22 PSSCRVSLLVGDAHQIDLVLPAAVPLSALTDSTLGAVNRLLRSKGEDELPV---GTYEFA 78 Query 78 LVDG-APLRATQSLTEQDVYDGDRLWIRFIADTERRSQVIEHISTAVASDLSKRFARIDP 136 G L SL+ Q V DGD L R + +IE++STA+A F + Sbjct 79 RAVGMTRLSEEVSLSAQGVADGDLLAFVPEKTARRYTPLIENVSTALARWAHAHFPPVST 138 Query 137 IVAVQVGASMVATGVVLATGVLGWWRWHHNT-WLTTIYTAVIGVLVLAVAMLLLMRAKTD 195 AV V ++ A ++ A ++ RW WL+ AV ++LA AML A+ Sbjct 139 HDAVVVAGALTAAALIGAALLVWRLRWAAQPFWLSPAIFAVTAGILLATAML---SARAG 195 Query 196 ADRRVADIMLMSAIMPVTVAAAAAPPGPV-GSPQAVLGFGVLTVAAALALRFTGRRLGIY 254 A R + D +A++ + +A A+AP G G+P A L V TV L R TGR Sbjct 196 ASRVIVDGAAWAALVGLVLAGASAPYGNQPGAPHAFLAAVVATVGVLLLARMTGRHWTAA 255 Query 255 TTIVIIGALTMLAALARMVAATSAVTLLSSLLLICVVAYHAAPALSRRLAGIRLPVFPSA 314 IV + + A L RM A + +L+ ++A AA A+ ++ + F S Sbjct 256 AAIVTVTTAVIAAGLTRMFFDVPAQRIAIVMLMAVLIASRAATAIGLWMSKVPRQSFESI 315 Query 315 TSRWVFEARPDLPTTVVVSGGSAPVLEGPSSVRDVLLQAE-------RARSFLSGLLTGL 367 T R +F P P + PV S+ DV L+ E R+ L+G L G+ Sbjct 316 TGRDMFTRAPGQPEDTLT-----PV---ESAAHDVTLRGEQVAEVARRSNRVLTGTLLGI 367 Query 368 GVMVVVCMTSLCDPHTGQRWLPLILAGFTSGFLLLRGRSYVDRWQSITLAGTAVIIAAAV 427 V+ + P +G +W +++ T+ L+LR R R ++T+ + + A+ Sbjct 368 AVVQLAASWWAIAPGSGSQWPSIVVVVVTALCLILRARGLRHRRHAVTIVSGSALSLMAI 427 Query 428 CVRYALELSSP----LAVSIVAAILVLLPAAGMAAAAHVPHTIYSPLFRKFVEWIEYLCL 483 + Y LS+P ++V++ AA ++ + AG+ A A +P +S R+ VEW+EYL Sbjct 428 PLHYG--LSAPASATVSVAVSAAAVLAVAVAGLLAGAVIPSRSFSEPIRQVVEWLEYLGY 485 Query 484 MPIFPLALWLMNVYAAIR 501 I P A W + + IR Sbjct 486 ALIVPFAAWAIGLLQYIR 503 >gi|167967954|ref|ZP_02550231.1| hypothetical membrane protein [Mycobacterium tuberculosis H37Ra] Length=60 Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 59/60 (99%), Positives = 60/60 (100%), Gaps = 0/60 (0%) Query 15 VASPQAVVVGVMAGEGVQIGVLLDANAPVSVMTDPLLKVVNSRLRELGEAPLEATGRGRW 74 +ASPQAVVVGVMAGEGVQIGVLLDANAPVSVMTDPLLKVVNSRLRELGEAPLEATGRGRW Sbjct 1 MASPQAVVVGVMAGEGVQIGVLLDANAPVSVMTDPLLKVVNSRLRELGEAPLEATGRGRW 60 >gi|54022794|ref|YP_117036.1| hypothetical protein nfa8270 [Nocardia farcinica IFM 10152] gi|54014302|dbj|BAD55672.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=493 Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 150/506 (30%), Positives = 219/506 (44%), Gaps = 48/506 (9%) Query 16 ASPQAVVVGVMAGEGVQIGVLLDANAPVSVMTDPLLKVVNSRL-----RELGEAPLEATG 70 A P+ V V+ G Q+ V L A P++ L+ ++ SR E G APLE Sbjct 12 AEPELCRVSVIGGN-TQVDVGLPATVPIATFMRDLVALIESRNPDPVDSEEGAAPLETQ- 69 Query 71 RGRWALCLVDGAPLRATQSLTEQDVYDGDRLWIRFIADTERRS---QVIEHISTAVASDL 127 W L + + +++LTE +VYDG+ L +R + E + VI+ +S A D Sbjct 70 --HWTLARLGRDAIPPSRTLTEAEVYDGELLVLRSVTAKESPALFDDVIDAVSRLTAEDH 127 Query 128 ---SKRFARIDPIVAVQVGASMVATGVVLATGVLGWWRWHHNTWLTTIYTAVIGVLVLAV 184 S R AR G + T V+LA G+ R H L + A L Sbjct 128 HSWSPRSAR-------WTGLAACVTVVLLALGLFAVGRGHGGG-LAAPFLATGAGLAAVA 179 Query 185 AMLLLMRAKTDADRRVADIMLMSAIMPVTVAAAAAPPGPVGSPQAVLGFGVLTVAAALAL 244 A ++ +R K D DR A + ++A++ AA PG +GSP +LG V V A Sbjct 180 AAVIAVR-KYD-DRLTALWLSLTALLLFFGGAALFVPGELGSPHLMLGCSVSLVIAVGLY 237 Query 245 RFTGRRLGIYTTIVIIGALTMLAALARMVAATSAVTLLSSLLLICVVAYHAAPALSRRLA 304 R TG + V + +AAL RMV T + LL+ ++ P RLA Sbjct 238 RATGVGATLCAAAVTLALFGGVAALVRMVWDTPLPRIAVGLLVGAIILLSMIP----RLA 293 Query 305 GI--RLPVFPSATSRWVF-----EARPDLPTTVVVSGGSAPVLEGPSSVRDVLLQAERAR 357 + RLPV P T+ E RP + + + P G +A A Sbjct 294 AVAARLPVPPVPTAGAAIDPADHEQRPTIEGIGAIGATALPSAVGLGE------RARAAN 347 Query 358 SFLSGLLTGLGVMVVVCMTSLCDPHTGQRWLPLILAGFTSGFLLLRGRSYVDRWQSITL- 416 + +G++ G V+ V DP RW L LA T+ L LRGR++ D Q+ TL Sbjct 348 QYQTGMVIGAAVVAAVGALGTADPLGHVRWQGLTLAVITAIILCLRGRAFADLVQAGTLI 407 Query 417 -AGTAVIIAAAVCVRYALELSSPLAVSIVAAILVLLPAAGMAAAAHVPHTIYSPLFRKFV 475 AG +VI + AL + +L+ L AA +A PH +P+ R+ Sbjct 408 VAGASVIAG----LLTALAFGDSGLWLLSGGLLLALAAAVVAFGVIGPHIEITPVTRRAG 463 Query 476 EWIEYLCLMPIFPLALWLMNVYAAIR 501 E EYL + I PLALWL+ +Y+ R Sbjct 464 EIFEYLLICAIIPLALWLLGIYSMAR 489 >gi|296393782|ref|YP_003658666.1| secretion protein snm4 [Segniliparus rotundus DSM 44985] gi|296180929|gb|ADG97835.1| secretion protein snm4 [Segniliparus rotundus DSM 44985] Length=502 Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 117/482 (25%), Positives = 213/482 (45%), Gaps = 16/482 (3%) Query 28 GEGVQIGVLLDANAPVSVMTDPLLKVVNSRLRELGEAPLEATGRGRWALCLVDGAPLRAT 87 G Q V L + PV+V+ L+ ++ +R+ LG + R +W L V AP+ T Sbjct 25 GGNAQFDVGLPSEVPVAVLIPDLVALIQTRVPNLGGEGSQNEARNQWTLGRVGQAPIPLT 84 Query 88 QSLTEQDVYDGDRLWIRFIADTERRSQVIEHISTAVASDLSKRFARIDPIVAVQVG-ASM 146 ++L E V+DGD L +R +A E + + + AVA F P A +G A++ Sbjct 85 KTLAEAGVHDGDLLILRAVA-AEESPLLFDDVIDAVARVNQHAFRHWGPNAARYLGMATL 143 Query 147 VATGVVLATGVLGWWRWHHNTWLTTIYTAVIGV---LVLAVAMLLLMRAKTDADRRVADI 203 V A + + H + + V+ + L +A ++ R +A++ Sbjct 144 VVASFFAARLLFLYGSVAHESRFEDFLSPVLLIVWGLFFHIAGWVIGRRYH--QHTIANV 201 Query 204 MLMSAIMPVTVAAAAAPPGPVGSPQAVLGFGVLTVAAALALRFTGRRLGIYTTIVIIGAL 263 + + + PGP+G V V A ++ R + + +T + + L Sbjct 202 LCWCGLPFIFFGVMVCVPGPIGLSSIWAACAVAFVFAIISSRVSLSGMVQHTAVATLALL 261 Query 264 TMLAALARMVAATSAVTLLSSLLLICVVAYHAAPALSRRLAGIRLPVFPSATSRWVFEAR 323 LA S + ++L+ + + +A + LA + LP P+A + V Sbjct 262 VGLAYADMDYFGHSTQVVGAALVCMAIFIISSASKFTIALAKLPLPPVPTA-GQAVDAEE 320 Query 324 PDLPTTVVVSG-GSAPVLEGPSSVRDVLLQAERARSFLSGLLTGLGVMVVVCMTSLCDPH 382 DL + V G G+ + P++ +D+ +A+ A ++L+GL+ ++ + + P Sbjct 321 IDLHPS--VEGIGAIGAMALPNA-KDLEQRAKAANNYLTGLVIASSLVAIGGALAAARPT 377 Query 383 TGQRWLPLILAGFTSGFLLLRGRSYVDRWQSITLAGTAVIIAAAVCV---RYALELSSPL 439 W +L + L+LRGRS+ D Q+ + + ++ A+ R LE + Sbjct 378 AEYPWQGPLLGVIVAIVLVLRGRSFTDLVQASVMIVSGFLLFVALLYAGGRGTLEHQPWI 437 Query 440 AVSIVAAILVLLPAAGMAAAAHVPHTIYSPLFRKFVEWIEYLCLMPIFPLALWLMNVYAA 499 A+++ A LVL A + VP+ YSP+ R+ E EY + IFPL W+M +Y+A Sbjct 438 ALALGVA-LVLFSIAFLIIGVIVPNQTYSPVMRRAGEVFEYTLIALIFPLVFWIMGLYSA 496 Query 500 IR 501 +R Sbjct 497 VR 498 >gi|317506955|ref|ZP_07964724.1| secretion protein snm4 [Segniliparus rugosus ATCC BAA-974] gi|316254713|gb|EFV14014.1| secretion protein snm4 [Segniliparus rugosus ATCC BAA-974] Length=503 Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 119/492 (25%), Positives = 213/492 (44%), Gaps = 30/492 (6%) Query 28 GEGVQIGVLLDANAPVSVMTDPLLKVVNSRLRELGEAPLEATGRGRWALCLVDGAPLRAT 87 G Q V L A PV+V+ L+ ++ +R+ LG + R +W L V AP+ T Sbjct 20 GGNAQFDVGLPAEVPVAVLIPDLVALIQTRVPNLGGEGSQNEARNQWTLGRVGQAPIPLT 79 Query 88 QSLTEQDVYDGDRLWIRFIADTERRSQVIEHISTAVASDLSKRFARIDPIVAVQVGASMV 147 ++L E VYDGD L +R +A E + + + AV+ F P A +G + + Sbjct 80 KTLAEAGVYDGDLLILRAVA-AEESPLLFDDVIDAVSRVNQHAFRHWGPNAARYLGMATL 138 Query 148 ATGVVLATGVLGWW-----RWHHNTWLTTIYTAVIGVLVLAVAMLLLMRAKTDADRRVAD 202 A +L + +L + V GV ++ R A +++ Sbjct 139 VVASFFAARLLFLYGSVPHESRFEDFLAPVLCIVWGVFFHVSGWIIGRRYHQHA---ISN 195 Query 203 IMLMSAIMPVTVAAAAAPPGPVGSPQAVLGFGVLTVAAALALRFT----GRRLGIYTTIV 258 ++ + + + PG +G+ +V AA + F R+ T++ Sbjct 196 VLCWCGVPFIFFGVMVSVPGDTSKANV---WGLSSVWAACTVTFVIAIISSRISTSGTVL 252 Query 259 --IIGALTMLAALARM---VAATSAVTLLSSLLLICVVAYHAAPALSRRLAGIRLPVFPS 313 I T+L LA + S + ++L+ + A + LA + LP P+ Sbjct 253 HTAIATFTLLLGLAYADMDIFHHSYQVVGAALVCAAIFIISAGSKFAIALAKLPLPPVPT 312 Query 314 ATSRWVFEARPDLPTTVVVSG-GSAPVLEGPSSVRDVLLQAERARSFLSGLLTGLGVMVV 372 A + V DL + V G G+ + P++ +D+ +A+ + +L+GL+ ++ + Sbjct 313 A-GQAVDAEEIDLHPS--VEGIGAIGAMALPNA-KDLEQRAKASNHYLTGLVIASSLIAI 368 Query 373 VCMTSLCDPHTGQRWLPLILAGFTSGFLLLRGRSYVDRWQSITLAGTAVIIAAAVCV--- 429 + P W +LA + L+LRGRS+ D Q+ + G+ + A+ Sbjct 369 GGALAAARPTAAYPWQGPVLATIVAIVLVLRGRSFTDLVQASVMIGSGFFLFVALIYGGG 428 Query 430 RYALELSSPLAVSIVAAILVLLPAAGMAAAAHVPHTIYSPLFRKFVEWIEYLCLMPIFPL 489 R +L+ +A+++ A LVL A + VP+ YSP+ R+ E EY + IFPL Sbjct 429 RGSLQNQPWIALALGVA-LVLFSIAFLIIGVVVPNQTYSPVMRRAGEVFEYTLIAFIFPL 487 Query 490 ALWLMNVYAAIR 501 W+M +Y+A+R Sbjct 488 VFWIMGLYSAVR 499 >gi|342860122|ref|ZP_08716774.1| secretion protein Snm4 [Mycobacterium colombiense CECT 3035] gi|342132500|gb|EGT85729.1| secretion protein Snm4 [Mycobacterium colombiense CECT 3035] Length=476 Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 126/475 (27%), Positives = 210/475 (45%), Gaps = 40/475 (8%) Query 60 ELGEAPLEATG-------RGRWALCLVDGAPLRATQSLTEQDVYDGDRLWIRFIADTERR 112 EL +A L+ G G + L ++G L +SL E V DGD L + D E Sbjct 10 ELFDADLKRKGFDGIALPAGSYELHKINGVRLDINKSLDELGVQDGDTLVLVPRVDGESF 69 Query 113 SQVIEHISTAVAS-------DLSKR-FARIDPIVAVQVGASMVA--TGVVLATGVLGWWR 162 E +ST +A+ D R FA + P+ A +++A GVV+A + R Sbjct 70 EPQYESLSTGLAAMGKWLGRDGGDRMFAPVTPLTAAHTAVAVIAMAVGVVVALTLRA--R 127 Query 163 WHHNTWLTTIYTAVIGVLVLAVAMLLLMRAKTDADRRVADIMLMSAIMPVTVAAAAAPPG 222 + + + +G L+L L++R+ R + A++ + A A APPG Sbjct 128 TFTDGPIPAAVSGAVGALLLVAT--LVVRSGWRERRDLFSGFAWLAVLSLATAGACAPPG 185 Query 223 PVGSPQAVLGFGVLTVAAALALRFTGR-RLGIYTTIVIIGALTMLAALA--RMVAATSAV 279 +G+ ++G V+ + A+A+ T R R ++ +LAA+A RM SA Sbjct 186 VLGAAHGLIG-AVVVILGAIAIGVTARNRWQTAVVTAVVTVCGILAAVAAVRMFRPASAQ 244 Query 280 TLLSSLLLICVVAYHAAPALSRRLAGIRLPVFPSATSRWVFEARPDLPTTVVVSGGSAPV 339 L +L+ +V AP ++ +A +R P F S T R +F R +P V Sbjct 245 VLAVCVLVGLLVLVRMAPLIALWVARVRPPHFGSITGRDLFARREGMPVDTVSPVSEDES 304 Query 340 LEGPSSVRDV-------LLQAERARSFLSGLLTGLGVMVVVCMTSLCDPHTGQRWLPLIL 392 + + + D+ A + GL G+ +++ + + P WL L++ Sbjct 305 EDEDNELTDITARGAAIAASARLVNAVQVGLCVGVSIVLPAAVWGVLTPGRQWAWLALVV 364 Query 393 AGFTSGFLLLRGRSYVDRWQSITLAGTAVIIAAAVC---VRYALELSSPLAVSIVAAILV 449 AG G L +GR + ++Q+I LA A +AAVC V+YA+ ++ ++ Sbjct 365 AGLVVGIFLTQGRGFAAKYQAIALACGA---SAAVCAGVVKYAVAAPKDAMTGLMWPVVA 421 Query 450 L--LPAAGMAAAAHVPHTIYSPLFRKFVEWIEYLCLMPIFPLALWLMNVYAAIRY 502 + A G+AAA VP + P R VEW+E L + + P A L ++ IR+ Sbjct 422 VATFAALGLAAALLVPAMRFRPFIRLTVEWVEVLAFIVLLPAAAALGGLFTWIRH 476 >gi|289572146|ref|ZP_06452373.1| conserved membrane protein [Mycobacterium tuberculosis T17] gi|289545901|gb|EFD49548.1| conserved membrane protein [Mycobacterium tuberculosis T17] Length=497 Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 127/486 (27%), Positives = 214/486 (45%), Gaps = 52/486 (10%) Query 39 ANAPVSVMTDPLLKVVNSRLRELGEAPLEATGRGRWALCLVDGAPLRATQSLTEQDVYDG 98 A PV + ++++ ++ L+ G + A G + L ++G L +SL E V DG Sbjct 30 AGIPVEGFFEGMVELFDADLKRKGFDGV-ALPAGSYELHKINGVRLDINKSLDELGVQDG 88 Query 99 DRLWIRFIADTERRSQVIEHISTAVAS-------DLSKR-FARIDPIVAVQVGASMVA-- 148 D L + E E +ST +A+ D R FA + + A +++A Sbjct 89 DTLVLVPRVAGESFEPQYESLSTGLAAMGKWLGRDGGDRMFAPVTSLTAAHTAMAIIAMA 148 Query 149 TGVVLATGVLGWWRWHHNTWLTTIYTAVIGVLVLAVAMLLLMRAKTDADRRVADIMLMSA 208 GVVLA + R ++ + IGVL++ A+++ + D L S Sbjct 149 VGVVLALTLRT--RTITDSPVPAAMAGGIGVLLVIGALVVWWGWRERRD-------LFSG 199 Query 209 I-----MPVTVAAAAAPPGPVGSPQAVLGFGVLTVAAALALRFTGRRLGIYTTIVIIGAL 263 + + VAAA APPG +G+ A++G V+ + A T +R ++ Sbjct 200 FGWLAVVLLAVAAACAPPGALGAAHALIGLVVVVLGAITIGVATRKRWQTAVVTAVVTVC 259 Query 264 TMLAALA--RMVAATSAVTLLSSLLLICVVAYHAAPALSRRLAGIRLPVFPSATSRWVFE 321 +LAA+A RM S L +L+ +V P ++ +A +R P F S T R +F Sbjct 260 GILAAVAAVRMFRPVSMQVLAICVLVGLLVLIRMTPTVALWVARVRPPHFGSITGRDLFA 319 Query 322 ARPDLPTTVVVSGGSAPVLEGPSSVRDVLLQAERAR------------SFLSGLLTGLGV 369 R +P V APV E + D L AR + G+ G+ + Sbjct 320 RRAGMPVDTV-----APVSEADADDEDNELTDITARGTAIAASARLVNAVQVGMCVGVSL 374 Query 370 MVVVCMTSLCDPHTGQRWLPLILAGFTSGFLLLRGRSYVDRWQSITLAGTAVIIAAAVC- 428 ++ + + P WL L++AG T G + +GR + ++Q++ L A +AAVC Sbjct 375 VLPAAVWGVLTPRQPWAWLALLVAGLTVGLFITQGRGFAAKYQAVALVCGA---SAAVCA 431 Query 429 --VRYALELSSPLAVSIV--AAILVLLPAAGMAAAAHVPHTIYSPLFRKFVEWIEYLCLM 484 ++YAL+ + ++ A + A G+A A VP T + P+ R VEW+E L ++ Sbjct 432 GVLKYALDTPKGVQTGLLWPAIFVAAFAALGLAVALVVPATRFRPIIRLTVEWLEVLAMI 491 Query 485 PIFPLA 490 + P A Sbjct 492 ALLPAA 497 >gi|289445488|ref|ZP_06435232.1| conserved membrane protein [Mycobacterium tuberculosis CPHL_A] gi|289418446|gb|EFD15647.1| conserved membrane protein [Mycobacterium tuberculosis CPHL_A] Length=509 Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 124/475 (27%), Positives = 208/475 (44%), Gaps = 52/475 (10%) Query 39 ANAPVSVMTDPLLKVVNSRLRELGEAPLEATGRGRWALCLVDGAPLRATQSLTEQDVYDG 98 A PV + ++++ ++ L+ G + A G + L ++G L +SL E V DG Sbjct 30 AGIPVEGFFEGMVELFDADLKRKGFDGV-ALPAGSYELHKINGVRLDINKSLDELGVQDG 88 Query 99 DRLWIRFIADTERRSQVIEHISTAVAS-------DLSKR-FARIDPIVAVQVGASMVA-- 148 D L + E E +ST +A+ D R FA + + A +++A Sbjct 89 DTLVLVPRVAGESFEPQYESLSTGLAAMGNWLGRDGGDRMFAPVTSLTAAHTAMAIIAMA 148 Query 149 TGVVLATGVLGWWRWHHNTWLTTIYTAVIGVLVLAVAMLLLMRAKTDADRRVADIMLMSA 208 GVVLA + R ++ + IGVL++ A+++ + D L S Sbjct 149 VGVVLALTLRT--RTITDSPVPAAMAGGIGVLLVIGALVVWWGWRERRD-------LFSG 199 Query 209 I-----MPVTVAAAAAPPGPVGSPQAVLGFGVLTVAAALALRFTGRRLGIYTTIVIIGAL 263 + + VAAA APPG +G+ A++G V+ + A T +R ++ Sbjct 200 FGWLAVVLLAVAAACAPPGALGAAHALIGLVVVVLGAITIGVATRKRWQTAVVTAVVTVC 259 Query 264 TMLAALA--RMVAATSAVTLLSSLLLICVVAYHAAPALSRRLAGIRLPVFPSATSRWVFE 321 +LAA+A RM S L +L+ +V P ++ +A +R P F S T R +F Sbjct 260 GILAAVAAVRMFRPVSMQVLAICVLVGLLVLIRMTPTVALWVARVRPPHFGSITGRDLFA 319 Query 322 ARPDLPTTVVVSGGSAPVLEGPSSVRDVLLQAERAR------------SFLSGLLTGLGV 369 R +P V APV E + D L AR + G+ G+ + Sbjct 320 RRAGMPVDTV-----APVSEADADDEDNELTDITARGTAIAASARLVNAVQVGMCVGVSL 374 Query 370 MVVVCMTSLCDPHTGQRWLPLILAGFTSGFLLLRGRSYVDRWQSITLAGTAVIIAAAVC- 428 ++ + + P WL L++AG T G + +GR + ++Q++ L A +AAVC Sbjct 375 VLPAAVWGVLTPRQPWAWLALLVAGLTVGLFITQGRGFAAKYQAVALVCGA---SAAVCA 431 Query 429 --VRYALELSSPLAVSIV--AAILVLLPAAGMAAAAHVPHTIYSPLFRKFVEWIE 479 ++YAL+ + ++ A + A G+A A VP T + P+ R VEW+E Sbjct 432 GVLKYALDTPKGVQTGLLWPAIFVAAFAALGLAVALVVPATRFRPIIRLTVEWLE 486 >gi|15611023|ref|NP_218404.1| transmembrane protein [Mycobacterium tuberculosis H37Rv] gi|121639797|ref|YP_980021.1| putative transmembrane protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148663754|ref|YP_001285277.1| putative transmembrane protein [Mycobacterium tuberculosis H37Ra] 49 more sequence titles Length=509 Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 124/475 (27%), Positives = 208/475 (44%), Gaps = 52/475 (10%) Query 39 ANAPVSVMTDPLLKVVNSRLRELGEAPLEATGRGRWALCLVDGAPLRATQSLTEQDVYDG 98 A PV + ++++ ++ L+ G + A G + L ++G L +SL E V DG Sbjct 30 AGIPVEGFFEGMVELFDADLKRKGFDGV-ALPAGSYELHKINGVRLDINKSLDELGVQDG 88 Query 99 DRLWIRFIADTERRSQVIEHISTAVAS-------DLSKR-FARIDPIVAVQVGASMVA-- 148 D L + E E +ST +A+ D R FA + + A +++A Sbjct 89 DTLVLVPRVAGESFEPQYESLSTGLAAMGKWLGRDGGDRMFAPVTSLTAAHTAMAIIAMA 148 Query 149 TGVVLATGVLGWWRWHHNTWLTTIYTAVIGVLVLAVAMLLLMRAKTDADRRVADIMLMSA 208 GVVLA + R ++ + IGVL++ A+++ + D L S Sbjct 149 VGVVLALTLRT--RTITDSPVPAAMAGGIGVLLVIGALVVWWGWRERRD-------LFSG 199 Query 209 I-----MPVTVAAAAAPPGPVGSPQAVLGFGVLTVAAALALRFTGRRLGIYTTIVIIGAL 263 + + VAAA APPG +G+ A++G V+ + A T +R ++ Sbjct 200 FGWLAVVLLAVAAACAPPGALGAAHALIGLVVVVLGAITIGVATRKRWQTAVVTAVVTVC 259 Query 264 TMLAALA--RMVAATSAVTLLSSLLLICVVAYHAAPALSRRLAGIRLPVFPSATSRWVFE 321 +LAA+A RM S L +L+ +V P ++ +A +R P F S T R +F Sbjct 260 GILAAVAAVRMFRPVSMQVLAICVLVGLLVLIRMTPTVALWVARVRPPHFGSITGRDLFA 319 Query 322 ARPDLPTTVVVSGGSAPVLEGPSSVRDVLLQAERAR------------SFLSGLLTGLGV 369 R +P V APV E + D L AR + G+ G+ + Sbjct 320 RRAGMPVDTV-----APVSEADADDEDNELTDITARGTAIAASARLVNAVQVGMCVGVSL 374 Query 370 MVVVCMTSLCDPHTGQRWLPLILAGFTSGFLLLRGRSYVDRWQSITLAGTAVIIAAAVC- 428 ++ + + P WL L++AG T G + +GR + ++Q++ L A +AAVC Sbjct 375 VLPAAVWGVLTPRQPWAWLALLVAGLTVGLFITQGRGFAAKYQAVALVCGA---SAAVCA 431 Query 429 --VRYALELSSPLAVSIV--AAILVLLPAAGMAAAAHVPHTIYSPLFRKFVEWIE 479 ++YAL+ + ++ A + A G+A A VP T + P+ R VEW+E Sbjct 432 GVLKYALDTPKGVQTGLLWPAIFVAAFAALGLAVALVVPATRFRPIIRLTVEWLE 486 >gi|340628859|ref|YP_004747311.1| hypothetical protein MCAN_39091 [Mycobacterium canettii CIPT 140010059] gi|340007049|emb|CCC46240.1| putative conserved transmembrane protein [Mycobacterium canettii CIPT 140010059] Length=509 Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 125/470 (27%), Positives = 209/470 (45%), Gaps = 42/470 (8%) Query 39 ANAPVSVMTDPLLKVVNSRLRELGEAPLEATGRGRWALCLVDGAPLRATQSLTEQDVYDG 98 A PV + ++++ ++ L+ G + A G + L ++G L +SL E V DG Sbjct 30 AGIPVEGFFEGMVELFDADLKRKGFDGV-ALPAGSYELHKINGVRLDINKSLDELGVQDG 88 Query 99 DRLWIRFIADTERRSQVIEHISTAVAS-------DLSKR-FARIDPIVAVQVGASMVA-- 148 D L + E E +ST +A+ D R FA + + A +++A Sbjct 89 DTLVLVPRVAGESFEPQYESLSTGLAAMGKWLGRDGGDRMFAPVTSLTAAHTAMAIIAMA 148 Query 149 TGVVLATGVLGWWRWHHNTWLTTIYTAVIGVLVLAVAMLLLMRAKTDADRRVADIMLMSA 208 GVVLA + R ++ + IGVL LA+ L++ + R + A Sbjct 149 VGVVLALTLRT--RTITDSPVPAAMAGGIGVL-LAIGALVVWWGWRE-RRDLFSGFGWLA 204 Query 209 IMPVTVAAAAAPPGPVGSPQAVLGFGVLTVAAALALRFTGRRLGIYTTIVIIGALTMLAA 268 ++ + VAAA APPG +G+ A++G V+ + A T +R ++ +LAA Sbjct 205 VVLLAVAAACAPPGALGAAHALIGLVVVVLGAIAIGVATRKRWQTAVVTAVVTVCGILAA 264 Query 269 LA--RMVAATSAVTLLSSLLLICVVAYHAAPALSRRLAGIRLPVFPSATSRWVFEARPDL 326 +A RM S L +L+ +V P ++ +A +R P F S T R +F R + Sbjct 265 VAAVRMFRPVSMQVLAICVLVGLLVLIRMTPTVALWVARVRPPHFGSITGRDLFARRAGM 324 Query 327 PTTVVVSGGSAPVLEGPSSVRDVLLQAERAR------------SFLSGLLTGLGVMVVVC 374 P V APV E + D L AR + G+ G+ +++ Sbjct 325 PVDTV-----APVSEADADDEDNELTDITARGTAIAASARLVNAVQVGMCVGVSLVLPAA 379 Query 375 MTSLCDPHTGQRWLPLILAGFTSGFLLLRGRSYVDRWQSITLAGTAVIIAAAVC---VRY 431 + + P WL L++AG T G + +GR + ++Q++ L A +AAVC ++Y Sbjct 380 VWGVLTPGQPWAWLALLVAGLTVGLFITQGRGFAAKYQAVALVCGA---SAAVCAGVLKY 436 Query 432 ALELSSPLAVSIV--AAILVLLPAAGMAAAAHVPHTIYSPLFRKFVEWIE 479 AL+ + ++ A + A G+A A VP T + P+ R VEW+E Sbjct 437 ALDTPKGVQTGLLWPAIFVAAFAALGLAVALVVPATRFRPIIRLTVEWLE 486 >gi|262201637|ref|YP_003272845.1| secretion protein snm4 [Gordonia bronchialis DSM 43247] gi|262084984|gb|ACY20952.1| secretion protein snm4 [Gordonia bronchialis DSM 43247] Length=515 Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 136/510 (27%), Positives = 214/510 (42%), Gaps = 34/510 (6%) Query 9 QADIEGVASPQAVVVGVMAGEGVQIGVLLDANAPVSVMTDPLLKVVNSR----------L 58 Q E P V V V+ G Q+ V L A P++ + L+ + SR Sbjct 21 QTGREPTIEPALVRVSVLGGN-TQLDVALPAAIPLAGLMGDLVAQIESRNPSHHDADDPD 79 Query 59 RELGEAPLEATGRGRWALCLVDGAPLRATQSLTEQDVYDGDRLWIRFIADTERRSQVIEH 118 + + RWAL LV PL +SL+E + DGD L + T + + Sbjct 80 ADPAGPERRHDRQNRWALALVGREPLPLNRSLSESGIRDGDLLLLTS-TRTGESPVLFDD 138 Query 119 ISTAVASDLSKRFARIDPIVAVQVGASMVATGVVLATGVLGWWRWHHNT-WLTTIYTAVI 177 + AVA +F A VG + V A+ + +R T W+ + + Sbjct 139 VVDAVAKLNESQFVNWSATSARYVGYGLALLASVAASAGVAAFRRTDETLWVAGLAGLLA 198 Query 178 GVLVLAVAMLLLMRAKTDADRRVADIMLMSAIMPVTVAAAAAPPGPVGSPQAVLGFGVLT 237 L+ A ++ ++ D A I+ + A+ V VA PG G+P LGF + Sbjct 199 LALITASTIV----SRYYRDPLSATIVSLCAMPAVFVAGMLITPGGFGAPHVTLGFALTL 254 Query 238 VAAALALRFTGRRLGIYT----TIVIIGALTMLAALARMVAATSAVTLLSSLLLICVVAY 293 +AA ++ R TG +G T T IG + AL + AA S V + + + V+A Sbjct 255 LAAIVSYRLTG--VGPITHSALTSAAIGGVLGCGALILVDAAVSDVAAVVTAAGLLVIAL 312 Query 294 HAAPALSRRLAGIRLPVFPSATSRWVFEARPDLPTTVVVSGGSAPVLEGPSSVRDVLLQA 353 AP + LA + LP P+A + E PT + A L +++ ++ Sbjct 313 --APRATIVLAKLPLPPVPTAGAAIDIEDVAPRPTIEGIGAIGAMALPKANALER---RS 367 Query 354 ERARSFLSGLLTGLGVMVVVCMTSLCDPHTGQRWLPLILAGFTSGFLLLRGRSYVDRWQS 413 A S+L+G++ G + VV P G A L LRGRS+ D +Q+ Sbjct 368 FVANSYLTGIVVGFTCVTVVAAVLTAAPLGGFDAKTTAYAAIVGAVLCLRGRSHSDLFQA 427 Query 414 ITL--AGTAVIIAAAVCVRYALELSSPLAVSIVAAILVLLPAAGMAAAAHVPHTIYSPLF 471 TL G +I + + + PL + A+LVL A A P +SP+ Sbjct 428 ATLIIGGALTLITLITGLAFGDD-HWPL-IGFGLAVLVLCGALVFGVIA--PTQEFSPVI 483 Query 472 RKFVEWIEYLCLMPIFPLALWLMNVYAAIR 501 R+ VE +EYL + I PL LW++++Y +R Sbjct 484 RRAVEILEYLLVTTIVPLLLWILDLYRIVR 513 >gi|339296695|gb|AEJ48806.1| transmembrane protein [Mycobacterium tuberculosis CCDC5079] gi|339300288|gb|AEJ52398.1| transmembrane protein [Mycobacterium tuberculosis CCDC5180] Length=468 Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 123/461 (27%), Positives = 200/461 (44%), Gaps = 58/461 (12%) Query 60 ELGEAPLEATG-------RGRWALCLVDGAPLRATQSLTEQDVYDGDRLWIRFIADTERR 112 EL +A L+ G G + L ++G L +SL E V DGD L + E Sbjct 2 ELFDADLKRKGFDGVALPAGSYELHKINGVRLDINKSLDELGVQDGDTLVLVPRVAGESF 61 Query 113 SQVIEHISTAVAS-------DLSKR-FARIDPIVAVQVGASMVA--TGVVLATGVLGWWR 162 E +ST +A+ D R FA + + A +++A GVVLA + R Sbjct 62 EPQYESLSTGLAAMGKWLGRDGGDRMFAPVTSLTAAHTAMAIIAMAVGVVLALTLRT--R 119 Query 163 WHHNTWLTTIYTAVIGVLVLAVAMLLLMRAKTDADRRVADIMLMSAI-----MPVTVAAA 217 ++ + IGVL++ A+++ + D L S + + VAAA Sbjct 120 TITDSPVPAAMAGGIGVLLVIGALVVWWGWRERRD-------LFSGFGWLAVVLLAVAAA 172 Query 218 AAPPGPVGSPQAVLGFGVLTVAAALALRFTGRRLGIYTTIVIIGALTMLAALA--RMVAA 275 APPG +G+ A++G V+ + A T +R ++ +LAA+A RM Sbjct 173 CAPPGALGAAHALIGLVVVVLGAITIGVATRKRWQTAVVTAVVTVCGILAAVAAVRMFRP 232 Query 276 TSAVTLLSSLLLICVVAYHAAPALSRRLAGIRLPVFPSATSRWVFEARPDLPTTVVVSGG 335 S L +L+ +V P ++ +A +R P F S T R +F R +P V Sbjct 233 VSMQVLAICVLVGLLVLIRMTPTVALWVARVRPPHFGSITGRDLFARRAGMPVDTV---- 288 Query 336 SAPVLEGPSSVRDVLLQAERAR------------SFLSGLLTGLGVMVVVCMTSLCDPHT 383 APV E + D L AR + G+ G+ +++ + + P Sbjct 289 -APVSEADADDEDNELTDITARGTAIAASARLVNAVQVGMCVGVSLVLPAAVWGVLTPRQ 347 Query 384 GQRWLPLILAGFTSGFLLLRGRSYVDRWQSITLAGTAVIIAAAVC---VRYALELSSPLA 440 WL L++AG T G + +GR + ++Q++ L A +AAVC ++YAL+ + Sbjct 348 PWAWLALLVAGLTVGLFITQGRGFAAKYQAVALVCGA---SAAVCAGVLKYALDTPKGVQ 404 Query 441 VSIV--AAILVLLPAAGMAAAAHVPHTIYSPLFRKFVEWIE 479 ++ A + A G+A A VP T + P+ R VEW+E Sbjct 405 TGLLWPAIFVAAFAALGLAVALVVPATRFRPIIRLTVEWLE 445 >gi|167969425|ref|ZP_02551702.1| conserved transmembrane protein [Mycobacterium tuberculosis H37Ra] gi|254548891|ref|ZP_05139338.1| hypothetical protein Mtube_00240 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|294995572|ref|ZP_06801263.1| hypothetical protein Mtub2_13962 [Mycobacterium tuberculosis 210] gi|297636573|ref|ZP_06954353.1| hypothetical protein MtubK4_20710 [Mycobacterium tuberculosis KZN 4207] gi|297733568|ref|ZP_06962686.1| hypothetical protein MtubKR_20855 [Mycobacterium tuberculosis KZN R506] gi|313660899|ref|ZP_07817779.1| hypothetical protein MtubKV_20850 [Mycobacterium tuberculosis KZN V2475] Length=469 Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 123/461 (27%), Positives = 200/461 (44%), Gaps = 58/461 (12%) Query 60 ELGEAPLEATG-------RGRWALCLVDGAPLRATQSLTEQDVYDGDRLWIRFIADTERR 112 EL +A L+ G G + L ++G L +SL E V DGD L + E Sbjct 3 ELFDADLKRKGFDGVALPAGSYELHKINGVRLDINKSLDELGVQDGDTLVLVPRVAGESF 62 Query 113 SQVIEHISTAVAS-------DLSKR-FARIDPIVAVQVGASMVA--TGVVLATGVLGWWR 162 E +ST +A+ D R FA + + A +++A GVVLA + R Sbjct 63 EPQYESLSTGLAAMGKWLGRDGGDRMFAPVTSLTAAHTAMAIIAMAVGVVLALTLRT--R 120 Query 163 WHHNTWLTTIYTAVIGVLVLAVAMLLLMRAKTDADRRVADIMLMSAI-----MPVTVAAA 217 ++ + IGVL++ A+++ + D L S + + VAAA Sbjct 121 TITDSPVPAAMAGGIGVLLVIGALVVWWGWRERRD-------LFSGFGWLAVVLLAVAAA 173 Query 218 AAPPGPVGSPQAVLGFGVLTVAAALALRFTGRRLGIYTTIVIIGALTMLAALA--RMVAA 275 APPG +G+ A++G V+ + A T +R ++ +LAA+A RM Sbjct 174 CAPPGALGAAHALIGLVVVVLGAITIGVATRKRWQTAVVTAVVTVCGILAAVAAVRMFRP 233 Query 276 TSAVTLLSSLLLICVVAYHAAPALSRRLAGIRLPVFPSATSRWVFEARPDLPTTVVVSGG 335 S L +L+ +V P ++ +A +R P F S T R +F R +P V Sbjct 234 VSMQVLAICVLVGLLVLIRMTPTVALWVARVRPPHFGSITGRDLFARRAGMPVDTV---- 289 Query 336 SAPVLEGPSSVRDVLLQAERAR------------SFLSGLLTGLGVMVVVCMTSLCDPHT 383 APV E + D L AR + G+ G+ +++ + + P Sbjct 290 -APVSEADADDEDNELTDITARGTAIAASARLVNAVQVGMCVGVSLVLPAAVWGVLTPRQ 348 Query 384 GQRWLPLILAGFTSGFLLLRGRSYVDRWQSITLAGTAVIIAAAVC---VRYALELSSPLA 440 WL L++AG T G + +GR + ++Q++ L A +AAVC ++YAL+ + Sbjct 349 PWAWLALLVAGLTVGLFITQGRGFAAKYQAVALVCGA---SAAVCAGVLKYALDTPKGVQ 405 Query 441 VSIV--AAILVLLPAAGMAAAAHVPHTIYSPLFRKFVEWIE 479 ++ A + A G+A A VP T + P+ R VEW+E Sbjct 406 TGLLWPAIFVAAFAALGLAVALVVPATRFRPIIRLTVEWLE 446 >gi|323717303|gb|EGB26508.1| hypothetical protein TMMG_00383 [Mycobacterium tuberculosis CDC1551A] Length=509 Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 123/475 (26%), Positives = 208/475 (44%), Gaps = 52/475 (10%) Query 39 ANAPVSVMTDPLLKVVNSRLRELGEAPLEATGRGRWALCLVDGAPLRATQSLTEQDVYDG 98 A PV + ++++ ++ L+ G + A G + L ++G L +SL E V DG Sbjct 30 AGIPVEGFFEGMVELFDADLKRKGFDGV-ALPAGSYELHKINGVRLDINKSLDELGVQDG 88 Query 99 DRLWIRFIADTERRSQVIEHISTAVAS-------DLSKR-FARIDPIVAVQVGASMVA-- 148 + L + E E +ST +A+ D R FA + + A +++A Sbjct 89 NTLVLVPRVAGESFEPQYESLSTGLAAMGKWLGRDGGDRMFAPVTSLTAAHTAMAIIAMA 148 Query 149 TGVVLATGVLGWWRWHHNTWLTTIYTAVIGVLVLAVAMLLLMRAKTDADRRVADIMLMSA 208 GVVLA + R ++ + IGVL++ A+++ + D L S Sbjct 149 VGVVLALTLRT--RTITDSPVPAAMAGGIGVLLVIGALVVWWGWRERRD-------LFSG 199 Query 209 I-----MPVTVAAAAAPPGPVGSPQAVLGFGVLTVAAALALRFTGRRLGIYTTIVIIGAL 263 + + VAAA APPG +G+ A++G V+ + A T +R ++ Sbjct 200 FGWLAVVLLAVAAACAPPGALGAAHALIGLVVVVLGAITIGVATRKRWQTAVVTAVVTVC 259 Query 264 TMLAALA--RMVAATSAVTLLSSLLLICVVAYHAAPALSRRLAGIRLPVFPSATSRWVFE 321 +LAA+A RM S L +L+ +V P ++ +A +R P F S T R +F Sbjct 260 GILAAVAAVRMFRPVSMQVLAICVLVGLLVLIRMTPTVALWVARVRPPHFGSITGRDLFA 319 Query 322 ARPDLPTTVVVSGGSAPVLEGPSSVRDVLLQAERAR------------SFLSGLLTGLGV 369 R +P V APV E + D L AR + G+ G+ + Sbjct 320 RRAGMPVDTV-----APVSEADADDEDNELTDITARGTAIAASARLVNAVQVGMCVGVSL 374 Query 370 MVVVCMTSLCDPHTGQRWLPLILAGFTSGFLLLRGRSYVDRWQSITLAGTAVIIAAAVC- 428 ++ + + P WL L++AG T G + +GR + ++Q++ L A +AAVC Sbjct 375 VLPAAVWGVLTPRQPWAWLALLVAGLTVGLFITQGRGFAAKYQAVALVCGA---SAAVCA 431 Query 429 --VRYALELSSPLAVSIV--AAILVLLPAAGMAAAAHVPHTIYSPLFRKFVEWIE 479 ++YAL+ + ++ A + A G+A A VP T + P+ R VEW+E Sbjct 432 GVLKYALDTPKGVQTGLLWPAIFVAAFAALGLAVALVVPATRFRPIIRLTVEWLE 486 >gi|254821257|ref|ZP_05226258.1| secretion protein Snm4 [Mycobacterium intracellulare ATCC 13950] Length=476 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 120/476 (26%), Positives = 205/476 (44%), Gaps = 42/476 (8%) Query 60 ELGEAPLEATG-------RGRWALCLVDGAPLRATQSLTEQDVYDGDRLWIRFIADTERR 112 EL +A L+ G G + L ++G L +SL E V DGD L + D E Sbjct 10 ELFDADLKRKGFDGISLPAGSYELHKINGVRLDINKSLDELGVQDGDTLVLVPRVDGESF 69 Query 113 SQVIEHISTAVAS-------DLSKR-FARIDPIVAVQVGASMVATGVVLATGVLGWWRWH 164 E +ST +A+ D R FA + P+ A +++A V + + Sbjct 70 EPQYESLSTGLAAMGKWLGRDGGDRMFAPVTPLTAAHTAVAVIAMAVSVVVAL----TLR 125 Query 165 HNTWLTTIYTAVI--GVLVLAVAMLLLMRAKTDADRRVADIMLMSAIMPVTVAAAAAPPG 222 T+ A + GV VL V L++R R + A++ + A A APPG Sbjct 126 ARTFTDGPIPAAVAGGVGVLLVIATLVVRTGWRERRDLFSGFAWLAVVSLATAGACAPPG 185 Query 223 PVGSPQAVLGFGVLTVAAALALRFTGRR----LGIYTTIVIIGALTMLAALARMVAATSA 278 +G+ ++G V+ + A+A+ T R + + + G L ++AA+ RM SA Sbjct 186 VLGAAHGLIG-AVVVILGAVAIGVTARNRWQTAVVTAVVTVCGVLAVVAAV-RMFRPASA 243 Query 279 VTLLSSLLLICVVAYHAAPALSRRLAGIRLPVFPSATSRWVFEARPDLPTTVVVSGGSAP 338 L +L+ +V P ++ +A +R P F S T R +F R +P V Sbjct 244 QVLAVCVLVGLLVLVRMTPLIALWVARVRPPHFGSITGRDLFARREGMPVDTVSPVSEDE 303 Query 339 VLEGPSSVRDV-------LLQAERARSFLSGLLTGLGVMVVVCMTSLCDPHTGQRWLPLI 391 + + + D+ A + GL G+ +++ + + P WL L+ Sbjct 304 SEDEDNELTDITARGAAIAASARLVNAVQVGLCVGVSIVLPAAVWGVLTPGRPWAWLALV 363 Query 392 LAGFTSGFLLLRGRSYVDRWQSITLAGTAVIIAAAVC---VRYALELSSPLAVSIVAAIL 448 +AG G + +GR + ++Q++ L A +AAVC V+YA+ + ++ ++ Sbjct 364 VAGLVVGIFITQGRGFAAKYQAVALVCGA---SAAVCAGVVKYAVAGAHDAMAGLLWPVV 420 Query 449 VL--LPAAGMAAAAHVPHTIYSPLFRKFVEWIEYLCLMPIFPLALWLMNVYAAIRY 502 + G+AAA VP + P R VEW+E L + + P A L ++ IR+ Sbjct 421 AVATFAGLGLAAALLVPAMRFRPFIRLTVEWVEVLAFIVLLPAAAALGGLFTWIRH 476 >gi|289747732|ref|ZP_06507110.1| conserved transmembrane protein [Mycobacterium tuberculosis 02_1987] gi|289688260|gb|EFD55748.1| conserved transmembrane protein [Mycobacterium tuberculosis 02_1987] Length=509 Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 124/475 (27%), Positives = 207/475 (44%), Gaps = 52/475 (10%) Query 39 ANAPVSVMTDPLLKVVNSRLRELGEAPLEATGRGRWALCLVDGAPLRATQSLTEQDVYDG 98 A PV + ++++ ++ L+ G + A G + L ++G L +SL E V DG Sbjct 30 AGIPVEGFFEGMVELFDADLKRKGFDGV-ALPAGSYELHKINGVRLDINKSLDELGVQDG 88 Query 99 DRLWIRFIADTERRSQVIEHISTAVAS-------DLSKR-FARIDPIVAVQVGASMVA-- 148 D L + E E +ST +A+ D R FA + + A +++A Sbjct 89 DTLVLVPRVAGESFEPQYESLSTGLAAMGKWLGRDGGDRMFAPVTSLTAAHTAMAIIAMA 148 Query 149 TGVVLATGVLGWWRWHHNTWLTTIYTAVIGVLVLAVAMLLLMRAKTDADRRVADIMLMSA 208 GVVLA + R ++ + IGVL++ A+++ + D L S Sbjct 149 VGVVLALTLRT--RTITDSPVPAAMAGGIGVLLVIGALVVWWGWRERRD-------LFSG 199 Query 209 I-----MPVTVAAAAAPPGPVGSPQAVLGFGVLTVAAALALRFTGRRLGIYTTIVIIGAL 263 + + VAAA APPG +G+ A++G V+ + A T +R ++ Sbjct 200 FGWLAVVLLAVAAACAPPGALGAAHALIGLVVVVLGAITIGVATRKRWQTAVVTAVVTVC 259 Query 264 TMLAALA--RMVAATSAVTLLSSLLLICVVAYHAAPALSRRLAGIRLPVFPSATSRWVFE 321 +LAA+A RM S L +L+ +V P ++ +A +R P F S T R +F Sbjct 260 GILAAVAAVRMFRPVSMQVLAICVLVGLLVLIRMTPTVALWVARVRPPHFGSITGRDLFA 319 Query 322 ARPDLPTTVVVSGGSAPVLEGPSSVRDVLLQAERAR------------SFLSGLLTGLGV 369 R +P V APV E + D L AR + G+ G+ + Sbjct 320 RRAGMPVDTV-----APVSEAGADDEDNELTDITARGTAIAASARLVNAVQVGMCVGVSL 374 Query 370 MVVVCMTSLCDPHTGQRWLPLILAGFTSGFLLLRGRSYVDRWQSITLAGTAVIIAAAVC- 428 ++ + + P WL L++AG T G + +GR + ++Q++ L A +AAVC Sbjct 375 VLPAAVWGVLTPRQPWAWLALLVAGLTVGLFITQGRGFAAKYQAVALVCGA---SAAVCA 431 Query 429 --VRYALELSSPLAVSIV--AAILVLLPAAGMAAAAHVPHTIYSPLFRKFVEWIE 479 ++YAL+ + ++ A + A G+A A VP T P+ R VEW+E Sbjct 432 GVLKYALDTPKGVQTGLLWPAIFVAAFAALGLAVALVVPATRVRPIIRLTVEWLE 486 >gi|15843518|ref|NP_338555.1| hypothetical protein MT4002 [Mycobacterium tuberculosis CDC1551] gi|13883893|gb|AAK48369.1| hypothetical protein MT4002 [Mycobacterium tuberculosis CDC1551] Length=469 Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 122/461 (27%), Positives = 200/461 (44%), Gaps = 58/461 (12%) Query 60 ELGEAPLEATG-------RGRWALCLVDGAPLRATQSLTEQDVYDGDRLWIRFIADTERR 112 EL +A L+ G G + L ++G L +SL E V DG+ L + E Sbjct 3 ELFDADLKRKGFDGVALPAGSYELHKINGVRLDINKSLDELGVQDGNTLVLVPRVAGESF 62 Query 113 SQVIEHISTAVAS-------DLSKR-FARIDPIVAVQVGASMVA--TGVVLATGVLGWWR 162 E +ST +A+ D R FA + + A +++A GVVLA + R Sbjct 63 EPQYESLSTGLAAMGKWLGRDGGDRMFAPVTSLTAAHTAMAIIAMAVGVVLALTLRT--R 120 Query 163 WHHNTWLTTIYTAVIGVLVLAVAMLLLMRAKTDADRRVADIMLMSAI-----MPVTVAAA 217 ++ + IGVL++ A+++ + D L S + + VAAA Sbjct 121 TITDSPVPAAMAGGIGVLLVIGALVVWWGWRERRD-------LFSGFGWLAVVLLAVAAA 173 Query 218 AAPPGPVGSPQAVLGFGVLTVAAALALRFTGRRLGIYTTIVIIGALTMLAALA--RMVAA 275 APPG +G+ A++G V+ + A T +R ++ +LAA+A RM Sbjct 174 CAPPGALGAAHALIGLVVVVLGAITIGVATRKRWQTAVVTAVVTVCGILAAVAAVRMFRP 233 Query 276 TSAVTLLSSLLLICVVAYHAAPALSRRLAGIRLPVFPSATSRWVFEARPDLPTTVVVSGG 335 S L +L+ +V P ++ +A +R P F S T R +F R +P V Sbjct 234 VSMQVLAICVLVGLLVLIRMTPTVALWVARVRPPHFGSITGRDLFARRAGMPVDTV---- 289 Query 336 SAPVLEGPSSVRDVLLQAERAR------------SFLSGLLTGLGVMVVVCMTSLCDPHT 383 APV E + D L AR + G+ G+ +++ + + P Sbjct 290 -APVSEADADDEDNELTDITARGTAIAASARLVNAVQVGMCVGVSLVLPAAVWGVLTPRQ 348 Query 384 GQRWLPLILAGFTSGFLLLRGRSYVDRWQSITLAGTAVIIAAAVC---VRYALELSSPLA 440 WL L++AG T G + +GR + ++Q++ L A +AAVC ++YAL+ + Sbjct 349 PWAWLALLVAGLTVGLFITQGRGFAAKYQAVALVCGA---SAAVCAGVLKYALDTPKGVQ 405 Query 441 VSIV--AAILVLLPAAGMAAAAHVPHTIYSPLFRKFVEWIE 479 ++ A + A G+A A VP T + P+ R VEW+E Sbjct 406 TGLLWPAIFVAAFAALGLAVALVVPATRFRPIIRLTVEWLE 446 >gi|336457497|gb|EGO36504.1| type VII secretion integral membrane protein EccD [Mycobacterium avium subsp. paratuberculosis S397] Length=509 Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 127/495 (26%), Positives = 217/495 (44%), Gaps = 40/495 (8%) Query 36 LLDANAPVSVMTDPLLKVVNSRLRELGEAPLEATGRGRWALCLVDGAPLRATQSLTEQDV 95 + A PV + ++++ ++ L+ G + A G + L ++G L +SL E V Sbjct 27 VFPAGIPVEGFFEGMVELFDADLKRKGFDGI-ALPAGSYELHKINGVRLDINKSLDELGV 85 Query 96 YDGDRLWIRFIADTERRSQVIEHISTAVAS--------DLSKRFARIDPIVAVQVGASMV 147 DGD L + D E E +S+ +A+ + FA + P+ A +++ Sbjct 86 QDGDTLVLVPRVDGESFEPQYESLSSGLAAMGKWLGREGGDRMFAPVTPLTAAHTAVAVI 145 Query 148 ATGVVLATGVLGWWRWHHNTWLTTIYTAVIGVLVLAVAMLLLMRAKTDADRRVADIMLMS 207 A V + G+ R + + IG L+L L++R+ R + Sbjct 146 AMAVAVVVGLCLRARTFTDGPIPAAVAGGIGALLLIAT--LVVRSGWRERRDLFSGFAWL 203 Query 208 AIMPVTVAAAAAPPGPVGSPQAVLGFGVLTVAAALALRFTGR-RLGIYTTIVIIGALTML 266 A++ + VA A APPG +G+ A++G V+ + A+A+ T R R ++ +L Sbjct 204 AVVALAVAGACAPPGVLGAAHALIGV-VVVILGAIAIGVTARNRWQTAVVTAVVTVCGVL 262 Query 267 AALA--RMVAATSAVTLLSSLLLICVVAYHAAPALSRRLAGIRLPVFPSATSRWVFEARP 324 AA+A RM S L +L+ +V P ++ +A +R P F S T R +F R Sbjct 263 AAVAAVRMFRPASVQVLAICVLVGLLVLVRMTPLIALWVARVRPPHFGSITGRDLFARRE 322 Query 325 DLPTTVVVSGGSAPVLEGPSSVRDVLLQ------------AERARSFLSGLLTGLGVMVV 372 +P V APV E S +D L A + GL G+ +++ Sbjct 323 GMPVDTV-----APVSEDESEEQDNKLTDITARGAAIAASARLVNAVQVGLCVGVSIVLP 377 Query 373 VCMTSLCDPHTGQRWLPLILAGFTSGFLLLRGRSYVDRWQSITLAGTAVIIAAAVC---V 429 + + P WL L++AG G + +GR + ++Q++ L A +AAVC V Sbjct 378 AAVWGVLTPGRPWAWLALVVAGLVVGIFITQGRGFAAKYQAVALVCGA---SAAVCTGVV 434 Query 430 RYALELSSPLAVSIVAAILVL--LPAAGMAAAAHVPHTIYSPLFRKFVEWIEYLCLMPIF 487 +YAL ++ ++ + A G+AAA VP + P R VEW+E L + + Sbjct 435 KYALAAPHDAMTGLLWPVVAVATFAAFGLAAALLVPTMRFRPFIRLTVEWVEVLAFIVLL 494 Query 488 PLALWLMNVYAAIRY 502 P A L ++ IR+ Sbjct 495 PAAAALGGLFTWIRH 509 >gi|41406262|ref|NP_959098.1| hypothetical protein MAP0164 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41394610|gb|AAS02481.1| hypothetical protein MAP_0164 [Mycobacterium avium subsp. paratuberculosis K-10] Length=509 Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 126/495 (26%), Positives = 217/495 (44%), Gaps = 40/495 (8%) Query 36 LLDANAPVSVMTDPLLKVVNSRLRELGEAPLEATGRGRWALCLVDGAPLRATQSLTEQDV 95 + A PV + ++++ ++ L+ G + A G + L ++G L +SL E V Sbjct 27 VFPAGIPVEGFFEGMVELFDADLKRKGFDGI-ALPAGSYELHKINGVRLDINKSLDELGV 85 Query 96 YDGDRLWIRFIADTERRSQVIEHISTAVAS--------DLSKRFARIDPIVAVQVGASMV 147 DGD L + D E E +S+ +A+ + FA + P+ A +++ Sbjct 86 QDGDTLVLVPRVDGESFEPQYESLSSGLAAMGKWLGREGGDRMFAPVTPLTAAHTAVAVI 145 Query 148 ATGVVLATGVLGWWRWHHNTWLTTIYTAVIGVLVLAVAMLLLMRAKTDADRRVADIMLMS 207 A V + G+ R + + IG L+L L++R+ R + Sbjct 146 AMAVAVVVGLCLRARTFTDGPIPAAVAGGIGALLLIAT--LVVRSGWRERRDLFSGFAWL 203 Query 208 AIMPVTVAAAAAPPGPVGSPQAVLGFGVLTVAAALALRFTGR-RLGIYTTIVIIGALTML 266 A++ + VA A APPG +G+ A++G V+ + A+A+ T R R ++ +L Sbjct 204 AVVALAVAGACAPPGVLGAAHALIGV-VVVILGAIAIGVTARNRWQTAVVTAVVTVCGVL 262 Query 267 AALA--RMVAATSAVTLLSSLLLICVVAYHAAPALSRRLAGIRLPVFPSATSRWVFEARP 324 AA+A RM S L +L+ +V P ++ +A +R P F S T R +F R Sbjct 263 AAVAAVRMFRPASVQVLAICVLVGLLVLVRMTPLIALWVARVRPPHFGSITGRDLFARRE 322 Query 325 DLPTTVVVSGGSAPVLEGPSSVRDVLLQ------------AERARSFLSGLLTGLGVMVV 372 +P V APV E S +D L A + GL G+ +++ Sbjct 323 GMPVDTV-----APVSEDESEEQDNELTDITARGAAIAASARLVNAVQVGLCVGVSIVLP 377 Query 373 VCMTSLCDPHTGQRWLPLILAGFTSGFLLLRGRSYVDRWQSITLAGTAVIIAAAVC---V 429 + + P WL L++AG G + +GR + ++Q++ L A +AAVC V Sbjct 378 AAVWGVLTPGRPWAWLALVVAGLVVGIFITQGRGFAAKYQAVALVCGA---SAAVCTGVV 434 Query 430 RYALELSSPLAVSIVAAILVL--LPAAGMAAAAHVPHTIYSPLFRKFVEWIEYLCLMPIF 487 ++AL ++ ++ + A G+AAA VP + P R VEW+E L + + Sbjct 435 KFALAAPHDAMTGLLWPVVAVATFAAFGLAAALLVPTMRFRPFIRLTVEWVEVLAFIVLL 494 Query 488 PLALWLMNVYAAIRY 502 P A L ++ IR+ Sbjct 495 PAAAALGGLFTWIRH 509 >gi|118464269|ref|YP_879451.1| secretion protein Snm4 [Mycobacterium avium 104] gi|118165556|gb|ABK66453.1| secretion protein Snm4 [Mycobacterium avium 104] Length=476 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 126/478 (27%), Positives = 208/478 (44%), Gaps = 46/478 (9%) Query 60 ELGEAPLEATG-------RGRWALCLVDGAPLRATQSLTEQDVYDGDRLWIRFIADTERR 112 EL +A L+ G G + L ++G L +SL E V DGD L + D E Sbjct 10 ELFDADLKRKGFDGIALPAGSYELHKINGVRLDINKSLDELGVQDGDTLVLVPRVDGESF 69 Query 113 SQVIEHISTAVAS--------DLSKRFARIDPIVAVQVGASMVATGVVLATGVLGWWRWH 164 E +S+ +A+ + FA + P+ A +++A V + G+ R Sbjct 70 EPQYESLSSGLAAMGKWLGREGGDRMFAPVTPLTAAHTAVAVIAMAVAVVVGLCLRARTF 129 Query 165 HNTWLTTIYTAVIGVLVLAVAMLLLMRAKTDADRRVADIMLMSAIMPVTVAAAAAPPGPV 224 + + IG L+L L++R+ R + A++ + VA A APPG + Sbjct 130 TDGPIPAAVAGGIGALLLIAT--LVVRSGWRERRDLFSGFAWLAVVALAVAGACAPPGVL 187 Query 225 GSPQAVLGFGVLTVAAALALRFTGR-RLGIYTTIVIIGALTMLAALA--RMVAATSAVTL 281 G+ A++G V+ + A+A+ T R R ++ +LAA+A RM S L Sbjct 188 GAAHALIGV-VVVILGAIAIGVTARNRWQTAVVTAVVTVCGVLAAVAAVRMFRPASVQVL 246 Query 282 LSSLLLICVVAYHAAPALSRRLAGIRLPVFPSATSRWVFEARPDLPTTVVVSGGSAPVLE 341 +L+ +V P ++ +A +R P F S T R +F R +P V APV E Sbjct 247 AICVLVGLLVLVRMTPLIALWVARVRPPHFGSITGRDLFARREGMPVDTV-----APVSE 301 Query 342 GPSSVRDVLLQ------------AERARSFLSGLLTGLGVMVVVCMTSLCDPHTGQRWLP 389 S +D L A + GL G+ +++ + + P WL Sbjct 302 DESEEQDNELTDITARGAAIAASARLVNAVQVGLCVGVSIVLPAAVWGVLTPGRPWAWLA 361 Query 390 LILAGFTSGFLLLRGRSYVDRWQSITLAGTAVIIAAAVC---VRYALELSSPLAVSIVAA 446 L++AG G + +GR + ++Q++ L A +AAVC V+YAL ++ Sbjct 362 LVVAGLVVGIFITQGRGFAAKYQAVALVCGA---SAAVCAGVVKYALAAPHDAMTGLLWP 418 Query 447 ILVL--LPAAGMAAAAHVPHTIYSPLFRKFVEWIEYLCLMPIFPLALWLMNVYAAIRY 502 ++ + A G+AAA VP + P R VEW+E L + + P A L ++ IR+ Sbjct 419 VVAVTTFAAFGLAAALLVPAMRFRPFIRLTVEWVEVLAFIVLLPAAAALGGLFTWIRH 476 >gi|169630836|ref|YP_001704485.1| hypothetical protein MAB_3757 [Mycobacterium abscessus ATCC 19977] gi|169242803|emb|CAM63831.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=511 Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 137/505 (28%), Positives = 220/505 (44%), Gaps = 55/505 (10%) Query 29 EGVQIGVLLDANAPVSVMTDPLLKVVNSRLR--ELGEAPLEATGRGRWALCLVDGAPLRA 86 E Q+ + L + P++++ ++ ++N + EL +P +A W L PL+ Sbjct 25 ERTQVDLALPTSVPLALLVGSIVDIINQHVGVPEL-TSPEDAV-ETHWRLSRPGQPPLQM 82 Query 87 TQSLTEQDVYDGDRLWIRFIADTERRSQVIEHISTAV-------ASDLSKRFARIDPIVA 139 + +L E +V DGD L I +D + + + AV A S+ ARI Sbjct 83 SSTLGELEVRDGD-LLILTRSDVAAPDPLFDDVFLAVSTFRTVSAHPWSRNAARI----- 136 Query 140 VQVGASMVATGVVL-ATGVLGWWRWHHNTWLTTIYTAVIGVLVLAVAMLLLMRAKTDADR 198 +GAS+ +L AT +L + L +I V + VAM + A D Sbjct 137 --LGASVCGLSALLGATALLRAGATNPGLLLP-----IIAVAIALVAMTAAVFANRVYDD 189 Query 199 RVADIML-MSAIMPVTVAAAAAPPGPVGSPQAVLGFGVLTVAAALALRFTGRRLGIYTTI 257 +A +ML A+ VA A PG G+P A+L V V + LA+R TG + Sbjct 190 SLASVMLSHCAVGFSAVAGALFVPGKYGAPHAMLALMVAMVVSILAMRATGTGTTSLVAV 249 Query 258 VIIGALTMLAALARMVAATSAVTLLSSLLLICVVAYHAAPALSRRLAGIRLPVFPSATSR 317 L AAL ++ +L + L + + A +P ++ LA + LP P+ + Sbjct 250 ASASFLGFAAALGYVLFEPPIYSLGAVLGSVGICAVALSPRVAMVLARLPLPPVPTQGA- 308 Query 318 WVFEARPDLPTTVV--VSGGSAPVLEGPS--------SVRDVLLQAERARSFLSGLLTG- 366 +RP+ T + + G EG + D+ +A RA + L+GL+ G Sbjct 309 ---PSRPEHSTAPIEAIEGLDGLDTEGDDVEDATALPPLPDLREKALRAHAVLTGLVCGT 365 Query 367 -----LGVMVVVCMTSLCDPH--TG-QRWLPLILAGFTSGFLLLRGRSYVDRWQS--ITL 416 +G M+ S H TG R ++LAG + ++LR RS+ D Q+ I L Sbjct 366 SAVTAVGAMLAALTFSGAGGHHPTGAHRLSGVVLAGLIALAMMLRARSHADLAQTVAINL 425 Query 417 AGTAVIIAAAVCVRYALELSSPLAVSIVAAILVLLPAAGMAAAAHVPHTIYSPLFRKFVE 476 G A+ AA V A ++ + A A G +A YSP+ R+ VE Sbjct 426 GGIAIPAAAFAFVAVAYPTAAVFTTVLAAIAAGSAIALGFLVSARK----YSPVARRTVE 481 Query 477 WIEYLCLMPIFPLALWLMNVYAAIR 501 IEY+ L I P+A+W+ VY+A+R Sbjct 482 IIEYIALSLIVPIAVWVCGVYSAVR 506 >gi|343925122|ref|ZP_08764654.1| hypothetical protein GOALK_033_01130 [Gordonia alkanivorans NBRC 16433] gi|343765053|dbj|GAA11580.1| hypothetical protein GOALK_033_01130 [Gordonia alkanivorans NBRC 16433] Length=514 Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 122/499 (25%), Positives = 212/499 (43%), Gaps = 28/499 (5%) Query 17 SPQAVVVGVMAGEGVQIGVLLDANAPVSVMTDPLLKVVNSR--LRELGEAP-LEATGRGR 73 PQ V V V+ G Q+ V L A P++ + L+ + SR R + P ++ GRGR Sbjct 28 EPQLVRVSVLGGN-TQLDVGLPAGIPIAGLIGDLVAQIESRNPTRHDPDDPDADSRGRGR 86 Query 74 -------WALCLVDGAPLRATQSLTEQDVYDGDRLWIRFIADTERRSQVIEHISTAVASD 126 W L LV PL +SL+E + DGD L + T+ + + + AVA Sbjct 87 PHDRQNRWTLALVGQEPLPLHRSLSESGIRDGDLLLLTS-TRTDESPVLFDDVVDAVARL 145 Query 127 LSKRFARIDPIVAVQVGASMVATGVVLATGVLGWWRWHHNT-WLTTIYT-AVIGVLVLAV 184 +F A VG ++ V+A L R WL+ + AVIG++ A Sbjct 146 NESQFVGWTATSARYVGHALALVAAVVAAAGLAASRIDSGALWLSGLSGLAVIGLVTAAT 205 Query 185 AMLLLMRAKTDADRRVADIMLMSAIMPVTVAAAAAPPGPVGSPQAVLGFGVLTVAAALAL 244 + R D+ + I+ + A V PG G+ LGF + V A + Sbjct 206 IVARYYR-----DQLSSTILSVCAAPMAFVTGMILTPGSYGAAHLTLGFALTLVTAVITY 260 Query 245 RFTGRRLGIYTTIVIIGALTMLAALARMVAATSAVTLLSSLLLICVVAYHAAPALSRRLA 304 R T ++ + L L AR++ + + + + ++ +P L+ LA Sbjct 261 RMTAVGATAHSAVTGAAVLGALGCGARLLLDADTSDVAAVMAAVGLLLIGLSPRLTILLA 320 Query 305 GIRLPVFPSATSRWVFEARPDLPTTVVVSGGSAPVLEGPSSVRDVLLQAERARSFLSGLL 364 + LP P+A + + P+ + A L ++ ++ A ++L+G++ Sbjct 321 KLPLPPVPTAGAAIDIKDIEPQPSIEGIGAIGATALPKADALER---RSYIANAYLTGIV 377 Query 365 TGLGVMVVVCMTSLCDPHTGQRWLPLILAGFTSGFLLLRGRSYVDRWQS--ITLAGTAVI 422 GL +V + P G W A L LRGRS+ D +Q+ + + G+ V+ Sbjct 378 GGLTAIVAISAVLTAAPLAGFEWKSAAYAAIIGVVLCLRGRSHSDLFQAAILIIGGSLVV 437 Query 423 IAAAVCVRYALELSSPLAVSIVAAILVLLPAAGMAAAAHVPHTIYSPLFRKFVEWIEYLC 482 + + + ++ ++ +LV G+ A PH +SP+ R++ E EY+ Sbjct 438 LTLLAGLAFGDGRWPIISFALGGVVLVAALVFGVVA----PHQDFSPVMRRWAEIGEYIL 493 Query 483 LMPIFPLALWLMNVYAAIR 501 + I PL LWL+++Y +R Sbjct 494 VALIVPLLLWLLDLYRIVR 512 >gi|240168357|ref|ZP_04747016.1| hypothetical protein MkanA1_03532 [Mycobacterium kansasii ATCC 12478] Length=511 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 132/510 (26%), Positives = 211/510 (42%), Gaps = 46/510 (9%) Query 17 SPQAVVVGVMAGEGVQIGVLLDANAPVSVMTDPLLKVVNSRLRELGE---APLEATGRGR 73 P V ++ G+ + ++L A AP+ D + V+ L + A + + +G Sbjct 19 KPATTRVTILTGKRMT-DLVLPAAAPMETYIDDTVAVLADLLEDTPPDVLAGFDFSAQGV 77 Query 74 WALCLVDGAPLRATQSLTEQDVYDGDRLWIRFIADTERRSQVIEHISTAVAS-DLSKRFA 132 WA PLR QSL E V DG L + ++ TER ++E + A+A D S F Sbjct 78 WAFARPGFPPLRLDQSLDEAGVVDGSLLTLVTVSRTERYRPLVEDVIDAIAVLDESPEFD 137 Query 133 R--IDPIVAVQVGASMVATGVVLATGVLGWWRWHHNT-WLTTIYTAVIGVLVLAVAMLLL 189 R +D V V + + VV V WW + W I +IGV+VL V + Sbjct 138 RSALDRFVHVAIPVMTLPITVV---AVRAWWATGRSPFWPLAI--GIIGVVVL-VGCFVA 191 Query 190 MRAKTDADRRVADIMLMSAIMPVTVAAAAAPPGP-----VGSPQAVLGFGVLTVAAALAL 244 R D +A+ +L++A P+T AAA A P P +G+PQ + + L Sbjct 192 KRFYQKLD--LAESLLLTAYQPLTAAAAIAVPLPRGVNSLGAPQ-IAAAATAVLFLTLMT 248 Query 245 RFTGRRLGIYTTIVIIGALTMLAALARMVAATSAVTLLSSLLLICVVAYHAAPALSRRLA 304 R RR + V I ++ +AA ++ + +AA L+ +A Sbjct 249 RGGPRRRHELASFVAITSIATIAAAVAFGYGYQHWVPAGAIAFGLFIVTNAA-KLTVAVA 307 Query 305 GIRLPVFPSATSRWVFEARPDLPTTVVVSGGSAPVLEGPSSVRDVLL-----QAERARSF 359 I LP P E D T + P + + +++ A+ Sbjct 308 RIALPPIPVPGETVDNEELLDPVTAQDATNEETPTWQAIIASAPASAARLTERSKLAKQL 367 Query 360 LSGLLTGLGVMVVVCMTSLCDPHTGQRWLPLILAGFTSGFLLLRGRSYVDRWQSITLAGT 419 L G +T G +V+ + H L++AG + R R Y DRW + + Sbjct 368 LIGYVTA-GTLVLAAGSIAVVVHGHFFVHSLVVAGLITVICGFRSRLYADRWCAWAMLAA 426 Query 420 AVIIAAAVCVR-------YA-LELSSPLAVSIVAAILVLLPAAGMAAAAHVPHTIYSPLF 471 AV+I + VR YA L L+ LA ++VA I+V A A V SP+ Sbjct 427 AVVIPTGLAVRLSLWYPHYAWLMLTIYLATAVVALIVV-------GATAQVRRV--SPVM 477 Query 472 RKFVEWIEYLCLMPIFPLALWLMNVYAAIR 501 ++ +E I+ + I PL LW+ +V+ +R Sbjct 478 KRILELIDGAMVASIVPLLLWITSVFDMVR 507 >gi|254773213|ref|ZP_05214729.1| secretion protein Snm4 [Mycobacterium avium subsp. avium ATCC 25291] Length=476 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 125/478 (27%), Positives = 207/478 (44%), Gaps = 46/478 (9%) Query 60 ELGEAPLEATG-------RGRWALCLVDGAPLRATQSLTEQDVYDGDRLWIRFIADTERR 112 EL +A L+ G G + L ++G L +SL E V DGD L + E Sbjct 10 ELFDADLKRKGFDGIALPAGSYELHKINGVRLDINKSLDELGVQDGDTLVLVPRVAGESF 69 Query 113 SQVIEHISTAVAS--------DLSKRFARIDPIVAVQVGASMVATGVVLATGVLGWWRWH 164 E +S+ +A+ + FA + P+ A +++A V + G+ R Sbjct 70 EPQYESLSSGLAAMGKWLGREGGDRMFAPVTPLTAAHTAVAVIAMAVAVVVGLCLRARTF 129 Query 165 HNTWLTTIYTAVIGVLVLAVAMLLLMRAKTDADRRVADIMLMSAIMPVTVAAAAAPPGPV 224 + + IG L+L L++R+ R + A++ + VA A APPG + Sbjct 130 TDGPIPAAVAGGIGALLLIAT--LVVRSGWRERRDLFSGFAWLAVVALAVAGACAPPGVL 187 Query 225 GSPQAVLGFGVLTVAAALALRFTGR-RLGIYTTIVIIGALTMLAALA--RMVAATSAVTL 281 G+ A++G V+ + A+A+ T R R ++ +LAA+A RM S L Sbjct 188 GAAHALIGV-VVVILGAIAIGVTARNRWQTAVVTAVVTVCGVLAAVAAVRMFRPASVQVL 246 Query 282 LSSLLLICVVAYHAAPALSRRLAGIRLPVFPSATSRWVFEARPDLPTTVVVSGGSAPVLE 341 +L+ +V P ++ +A +R P F S T R +F R +P V APV E Sbjct 247 AICVLVGLLVLVRMTPLIALWVARVRPPHFGSITGRDLFARREGMPVDTV-----APVSE 301 Query 342 GPSSVRDVLLQ------------AERARSFLSGLLTGLGVMVVVCMTSLCDPHTGQRWLP 389 S +D L A + GL G+ +++ + + P WL Sbjct 302 DESEEQDNELTDITARGAAIAASARLVNAVQVGLCVGVSIVLPAAVWGVLTPGRPWAWLA 361 Query 390 LILAGFTSGFLLLRGRSYVDRWQSITLAGTAVIIAAAVC---VRYALELSSPLAVSIVAA 446 L++AG G + +GR + ++Q++ L A +AAVC V+YAL ++ Sbjct 362 LVVAGLVVGIFITQGRGFAAKYQAVALVCGA---SAAVCAGVVKYALAAPHDAMTGLLWP 418 Query 447 ILVL--LPAAGMAAAAHVPHTIYSPLFRKFVEWIEYLCLMPIFPLALWLMNVYAAIRY 502 ++ + A G+AAA VP + P R VEW+E L + + P A L ++ IR+ Sbjct 419 VVAVTTFAAFGLAAALLVPAMRFRPFIRLTVEWVEVLAFIVLLPAAAALGGLFTWIRH 476 >gi|296167003|ref|ZP_06849416.1| transmembrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897633|gb|EFG77226.1| transmembrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=476 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 113/472 (24%), Positives = 200/472 (43%), Gaps = 34/472 (7%) Query 60 ELGEAPLEATG-------RGRWALCLVDGAPLRATQSLTEQDVYDGDRLWIRFIADTERR 112 EL +A L+ G G + L ++G L +SL E V DGD L + E Sbjct 10 ELFDADLKRKGFEGITLPAGSYELHKINGVRLDINKSLDELGVQDGDTLVLVPRVAGESF 69 Query 113 SQVIEHISTAVAS--------DLSKRFARIDPIVAVQVGASMVA--TGVVLATGVLGWWR 162 E +S+ +A+ + FA + P+ A +++A GVV+A + R Sbjct 70 EPQYESLSSGLAAMGKWLGREGGDRMFAPVTPLTAAHTAVAIIAMAAGVVVALTLRA--R 127 Query 163 WHHNTWLTTIYTAVIGVLVLAVAMLLLMRAKTDADRRVADIMLMSAIMPVTVAAAAAPPG 222 + + +GVL++ ++ + D L A++ + VA A APPG Sbjct 128 TFTDNPVPAAVAGAVGVLLVVATSVVWWGWRERRDLFSGFGWL--AVVLLAVAGACAPPG 185 Query 223 PVGSPQAVLGFGVLTVAAALALRFTGRR---LGIYTTIVIIGALTMLAALARMVAATSAV 279 +G+ ++G V+ + A+A+ R+ I T +V + + A RM SA Sbjct 186 TLGAAHGLIGL-VIVILGAIAIGVMTRKRWQTAIVTAVVTVCGILAAVAAVRMFRPASAQ 244 Query 280 TLLSSLLLICVVAYHAAPALSRRLAGIRLPVFPSATSRWVFEARPDLPTTVVVSGGSAPV 339 L +L+ ++ P ++ +A +R P F S T R +F R +P V Sbjct 245 VLAICVLVGLLILVRMTPLIALWVARVRPPHFGSITGRDLFARREGMPVDTVAPVSEDES 304 Query 340 LEGPSSVRDV-------LLQAERARSFLSGLLTGLGVMVVVCMTSLCDPHTGQRWLPLIL 392 + + + D+ A + G+ G+ +++ + + P WL L++ Sbjct 305 EDEDNELTDITARGAAVAASARLVNAVQVGVCVGVSIVLPAAVWGVLTPGRPWAWLALVV 364 Query 393 AGFTSGFLLLRGRSYVDRWQSITLAGTAVIIAAAVCVRYALELSSPLAVSIV--AAILVL 450 AG G + +GR + ++Q++ LA A A V+YA+ + ++ A + Sbjct 365 AGLVVGIFITQGRGFAAKYQAVALACGAAAAVCAGVVKYAIAEPKDVVSGLLWPAVAVAA 424 Query 451 LPAAGMAAAAHVPHTIYSPLFRKFVEWIEYLCLMPIFPLALWLMNVYAAIRY 502 A G+AAA VP + P R VEW+E L + + P A L ++ IR+ Sbjct 425 FAACGLAAALLVPTVRFRPFIRLTVEWVEVLAFIVLLPAAAALGGLFTWIRH 476 >gi|256380557|ref|YP_003104217.1| secretion protein snm4 [Actinosynnema mirum DSM 43827] gi|255924860|gb|ACU40371.1| secretion protein snm4 [Actinosynnema mirum DSM 43827] Length=464 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 74/288 (26%), Positives = 133/288 (47%), Gaps = 22/288 (7%) Query 214 VAAAAAPPGPVGSPQAVLGFGVLTVAAALALRFTGRRLGIYTTIVIIGALTMLAALARMV 273 VA A PGPVG +L ++ + AA+A+ GR + ++ GAL+ +A L + Sbjct 194 VAGLYAVPGPVGMANLLLASVLVLIFAAVAILLIGRGITVFIAAATAGALSAVAFLIGLF 253 Query 274 AATSAVTLLSSLLLICVVAYHAAPALSRRLAGIRLPVFPSATSRWVFEARPDLPTTVVVS 333 V + ++ + + A A P L+ +LA + LP+ P T+ + P V+ Sbjct 254 VEHPMVGIAAATSAVSLAALSALPRLTIQLAKLPLPMVP--TNAEDLKEDTGFPEYAVIE 311 Query 334 GGSAPVLEGPSSVRDVLLQAERARSFLSGLLTGLGVMVVVCMTSLCDPHTGQRWLPLILA 393 +A A +L+G++ G G V + ++ G + P ILA Sbjct 312 RRTA-----------------NAHEYLTGMIIGCGS--VAALFAVIAAGDGTVFGP-ILA 351 Query 394 GFTSGFLLLRGRSYVDRWQSITLAGTAVIIAAAVCVRYALELSSPLAVSIVAAILVLLPA 453 + LLLRGR+Y + Q++ L + + A V V + ++ S + V L+L+ A Sbjct 352 IVVTLVLLLRGRAYANGAQAVALLVSGMFAGAGVLVGWLVQSSPGDRLLFVFGALILVGA 411 Query 454 AGMAAAAHVPHTIYSPLFRKFVEWIEYLCLMPIFPLALWLMNVYAAIR 501 + P +SP+ R+ V+ +E + + + PLAL +M++Y +R Sbjct 412 VSLVLGVIFPQQKFSPVLRRTVDVLEAILIAAVLPLALAVMDMYVVMR 459 >gi|291298515|ref|YP_003509793.1| secretion protein snm4 [Stackebrandtia nassauensis DSM 44728] gi|290567735|gb|ADD40700.1| secretion protein snm4 [Stackebrandtia nassauensis DSM 44728] Length=470 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 113/446 (26%), Positives = 188/446 (43%), Gaps = 41/446 (9%) Query 67 EATGRGRWALCLVDGAPLRATQSLTEQDVYDGDRLWIRFIADTERRSQVIEHISTAVASD 126 + G G WAL + L A S E + DG+ L+ R + D + + + AV+ Sbjct 53 DGIGVGGWALARLGEPALDAELSCAELGIIDGEELFFRPVEDA-VPGIIFDDVVDAVSVA 111 Query 127 LSKRFARIDPIVAVQVGASMVATGVVLATGVLGWWRWHHNTWLTTIYTAVIGVLVLAVAM 186 +R D + + G + A ++ A GV G + T L + GV+ LA A Sbjct 112 GVRRSGVWDSDASRKFGLAAAAAALLGAIGVAG----YVGTVLAGTLVLIAGVVSLAAAW 167 Query 187 LL-----------LMRAKTDADRRVADIMLMSAIMPVTVAAAAAPPGPVGSPQAVLGFGV 235 L L+ A A I+L+S P+ +G+PQ + G V Sbjct 168 ALERAFERTRPATLLGAMGVACGLFGGIILLSQERPLE---------DLGAPQFLAGGSV 218 Query 236 LTVAAALALRFTGRRLGIYTTIVIIGALTMLAALARMVAATSAVTLLSSLLLICVVAYHA 295 + + A LA R + ++ ++++ G +LA ++L I ++ A Sbjct 219 MAIFALLASLAVERAMPLFHSVILAGIGLILATATCTWLPVEQPAAAATLAAIFLLVIPA 278 Query 296 APALSRRLAGIRLPVFPSATSRWVFEARPDLPTTVVVSGGSAPVLEGPSSVRDVLLQAER 355 P LS RLA + +P PS+T E R + P P + S + L++++R Sbjct 279 LPMLSYRLAQLPIPEVPSSTD----ELRRETP----------PPDDAASDL--ALVRSDR 322 Query 356 ARSFLSGLLTGLGVMVVVCMTSLCDPHTGQRWLPLILAGFTSGFLLLRGRSYVDRWQSIT 415 A F+SGLLT V+V C L TGQ LI++G S +LLL+ R + Q + Sbjct 323 ADEFMSGLLTACSVVVGGCAMVLGLTVTGQVLPSLIMSGLFSAWLLLKSRYFRSIGQRLP 382 Query 416 LAGTAVIIAAAVCVRYALELSSPLAVSIVAAILVLLPAAGMAAAAHVPHTIYSPLFRKFV 475 L + AA+ A L + +V A L +L + A + SP++ + Sbjct 383 LLIGGFLGPAALAYTGATALGPNARLLVVGASLTVLTILLLVHALAITGRKISPVWGRVG 442 Query 476 EWIEYLCLMPIFPLALWLMNVYAAIR 501 + ++ L + + P+ LW+ Y IR Sbjct 443 DVVQMLIGVAMVPMTLWVWGAYWWIR 468 Lambda K H 0.325 0.136 0.409 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1086623926964 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40