BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1797
Length=406
Score E
Sequences producing significant alignments: (Bits) Value
gi|15608934|ref|NP_216313.1| hypothetical protein Rv1797 [Mycoba... 811 0.0
gi|289443265|ref|ZP_06433009.1| conserved hypothetical protein [... 808 0.0
gi|183982686|ref|YP_001850977.1| hypothetical protein MMAR_2679 ... 591 6e-167
gi|118618461|ref|YP_906793.1| hypothetical protein MUL_3078 [Myc... 586 2e-165
gi|254821014|ref|ZP_05226015.1| hypothetical protein MintA_13852... 510 2e-142
gi|41407610|ref|NP_960446.1| hypothetical protein MAP1512 [Mycob... 509 2e-142
gi|118465331|ref|YP_882103.1| hypothetical protein MAV_2917 [Myc... 508 5e-142
gi|336457561|gb|EGO36566.1| type VII secretion protein EccE [Myc... 508 7e-142
gi|296164785|ref|ZP_06847346.1| conserved hypothetical protein [... 507 1e-141
gi|15827807|ref|NP_302070.1| hypothetical protein ML1537 [Mycoba... 495 5e-138
gi|254775392|ref|ZP_05216908.1| hypothetical protein MaviaA2_120... 493 3e-137
gi|342861299|ref|ZP_08717947.1| hypothetical protein MCOL_20546 ... 468 9e-130
gi|333990540|ref|YP_004523154.1| hypothetical protein JDM601_190... 276 3e-72
gi|333991968|ref|YP_004524582.1| hypothetical protein JDM601_332... 261 2e-67
gi|240169213|ref|ZP_04747872.1| hypothetical protein MkanA1_0786... 172 1e-40
gi|296165445|ref|ZP_06847981.1| conserved hypothetical protein [... 84.3 3e-14
gi|296138073|ref|YP_003645316.1| hypothetical protein Tpau_0334 ... 72.0 2e-10
gi|229489345|ref|ZP_04383208.1| conserved hypothetical protein [... 69.3 1e-09
gi|226305376|ref|YP_002765334.1| hypothetical protein RER_18870 ... 66.6 7e-09
gi|119855167|ref|YP_935772.1| hypothetical protein Mkms_5782 [My... 66.2 1e-08
gi|226365628|ref|YP_002783411.1| hypothetical protein ROP_62190 ... 65.1 2e-08
gi|111023128|ref|YP_706100.1| hypothetical protein RHA1_ro06165 ... 64.3 3e-08
gi|296393780|ref|YP_003658664.1| hypothetical protein Srot_1369 ... 62.8 1e-07
gi|169630839|ref|YP_001704488.1| hypothetical protein MAB_3760 [... 62.8 1e-07
gi|54022791|ref|YP_117033.1| hypothetical protein nfa8240 [Nocar... 57.4 4e-06
gi|54022813|ref|YP_117055.1| hypothetical protein nfa8460 [Nocar... 55.1 2e-05
gi|317506952|ref|ZP_07964721.1| hypothetical protein HMPREF9336_... 55.1 2e-05
gi|289441324|ref|ZP_06431068.1| conserved membrane protein [Myco... 51.6 2e-04
gi|126432680|ref|YP_001068371.1| hypothetical protein Mjls_0067 ... 51.2 3e-04
gi|108797058|ref|YP_637255.1| hypothetical protein Mmcs_0077 [My... 51.2 3e-04
gi|145226048|ref|YP_001136702.1| hypothetical protein Mflv_5453 ... 51.2 3e-04
gi|240168362|ref|ZP_04747021.1| hypothetical protein MkanA1_0355... 50.8 4e-04
gi|145221351|ref|YP_001132029.1| hypothetical protein Mflv_0756 ... 49.7 0.001
gi|315441765|ref|YP_004074644.1| hypothetical protein Mspyr1_007... 49.7 0.001
gi|289572535|ref|ZP_06452762.1| conserved hypothetical protein [... 49.7 0.001
gi|253800932|ref|YP_003033934.1| hypothetical protein TBMG_03930... 49.7 0.001
gi|294995567|ref|ZP_06801258.1| hypothetical protein Mtub2_13937... 49.3 0.001
gi|254366425|ref|ZP_04982469.1| conserved membrane protein [Myco... 49.3 0.001
gi|15611018|ref|NP_218399.1| hypothetical protein Rv3882c [Mycob... 49.3 0.001
gi|118463849|ref|YP_879453.1| hypothetical protein MAV_0159 [Myc... 48.5 0.002
gi|336457499|gb|EGO36506.1| type VII secretion protein EccE [Myc... 48.5 0.002
gi|120401119|ref|YP_950948.1| hypothetical protein Mvan_0091 [My... 47.8 0.003
gi|312140883|ref|YP_004008219.1| integral membrane protein [Rhod... 47.8 0.004
gi|118468438|ref|YP_884498.1| hypothetical protein MSMEG_0082 [M... 47.4 0.004
gi|256380562|ref|YP_003104222.1| hypothetical protein Amir_6577 ... 47.0 0.006
gi|325675479|ref|ZP_08155163.1| hypothetical protein HMPREF0724_... 47.0 0.007
gi|296164032|ref|ZP_06846655.1| conserved hypothetical protein [... 45.8 0.013
gi|183985429|ref|YP_001853720.1| hypothetical protein MMAR_5458 ... 43.9 0.053
gi|300782643|ref|YP_003762934.1| hypothetical protein AMED_0712 ... 43.1 0.079
gi|333988688|ref|YP_004521302.1| hypothetical protein JDM601_004... 41.6 0.23
>gi|15608934|ref|NP_216313.1| hypothetical protein Rv1797 [Mycobacterium tuberculosis H37Rv]
gi|15841266|ref|NP_336303.1| hypothetical protein MT1846 [Mycobacterium tuberculosis CDC1551]
gi|31792985|ref|NP_855478.1| hypothetical protein Mb1825 [Mycobacterium bovis AF2122/97]
71 more sequence titles
Length=406
Score = 811 bits (2094), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/406 (100%), Positives = 406/406 (100%), Gaps = 0/406 (0%)
Query 1 MKAQRSFGLALSWPRVTAVFLVDVLILAVASHCPDSWQADHHVAWWVGVGVAAVVTLLSV 60
MKAQRSFGLALSWPRVTAVFLVDVLILAVASHCPDSWQADHHVAWWVGVGVAAVVTLLSV
Sbjct 1 MKAQRSFGLALSWPRVTAVFLVDVLILAVASHCPDSWQADHHVAWWVGVGVAAVVTLLSV 60
Query 61 VSYHGITVISGLATWVRDWSADPGTTLGAGCTPAIDHQRRFGRDTVGVREYNGRLVSVIE 120
VSYHGITVISGLATWVRDWSADPGTTLGAGCTPAIDHQRRFGRDTVGVREYNGRLVSVIE
Sbjct 61 VSYHGITVISGLATWVRDWSADPGTTLGAGCTPAIDHQRRFGRDTVGVREYNGRLVSVIE 120
Query 121 VTCGESGPSGRHWHRKSPVPMLPVVAVADGLRQFDIHLDGIDIVSVLVRGGVDAAKASAS 180
VTCGESGPSGRHWHRKSPVPMLPVVAVADGLRQFDIHLDGIDIVSVLVRGGVDAAKASAS
Sbjct 121 VTCGESGPSGRHWHRKSPVPMLPVVAVADGLRQFDIHLDGIDIVSVLVRGGVDAAKASAS 180
Query 181 LQEWEPQGWKSEERAGDRTVADRRRTWLVLRMNPQRNVAAVACRDSLASTLVAATERLVQ 240
LQEWEPQGWKSEERAGDRTVADRRRTWLVLRMNPQRNVAAVACRDSLASTLVAATERLVQ
Sbjct 181 LQEWEPQGWKSEERAGDRTVADRRRTWLVLRMNPQRNVAAVACRDSLASTLVAATERLVQ 240
Query 241 DLDGQSCAARPVTADELTEVDSAVLADLEPTWSRPGWRHLKHFNGYATSFWVTPSDITSE 300
DLDGQSCAARPVTADELTEVDSAVLADLEPTWSRPGWRHLKHFNGYATSFWVTPSDITSE
Sbjct 241 DLDGQSCAARPVTADELTEVDSAVLADLEPTWSRPGWRHLKHFNGYATSFWVTPSDITSE 300
Query 301 TLDELCLPDSPEVGTTVVTVRLTTRVGSPALSAWVRYHSDTRLPKEVAAGLNRLTGRQLA 360
TLDELCLPDSPEVGTTVVTVRLTTRVGSPALSAWVRYHSDTRLPKEVAAGLNRLTGRQLA
Sbjct 301 TLDELCLPDSPEVGTTVVTVRLTTRVGSPALSAWVRYHSDTRLPKEVAAGLNRLTGRQLA 360
Query 361 AVRASLPAPTHRPLLVIPSRNLRDHDELVLPVGQELEHATSSFVGQ 406
AVRASLPAPTHRPLLVIPSRNLRDHDELVLPVGQELEHATSSFVGQ
Sbjct 361 AVRASLPAPTHRPLLVIPSRNLRDHDELVLPVGQELEHATSSFVGQ 406
>gi|289443265|ref|ZP_06433009.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
gi|289569864|ref|ZP_06450091.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289750365|ref|ZP_06509743.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
gi|289753892|ref|ZP_06513270.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
gi|289416184|gb|EFD13424.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
gi|289543618|gb|EFD47266.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289690952|gb|EFD58381.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
gi|289694479|gb|EFD61908.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
Length=406
Score = 808 bits (2087), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/406 (99%), Positives = 405/406 (99%), Gaps = 0/406 (0%)
Query 1 MKAQRSFGLALSWPRVTAVFLVDVLILAVASHCPDSWQADHHVAWWVGVGVAAVVTLLSV 60
MKAQRSFGLALSWPRVTAVFLVDVLILAVASHCPDSWQADHHVAWWVGVGVAAVVTLLSV
Sbjct 1 MKAQRSFGLALSWPRVTAVFLVDVLILAVASHCPDSWQADHHVAWWVGVGVAAVVTLLSV 60
Query 61 VSYHGITVISGLATWVRDWSADPGTTLGAGCTPAIDHQRRFGRDTVGVREYNGRLVSVIE 120
VSYHGITVISGLATWVRDWSADPGTTLGAGCTPAIDHQRRFGRDTVGVREYNGRLVSVIE
Sbjct 61 VSYHGITVISGLATWVRDWSADPGTTLGAGCTPAIDHQRRFGRDTVGVREYNGRLVSVIE 120
Query 121 VTCGESGPSGRHWHRKSPVPMLPVVAVADGLRQFDIHLDGIDIVSVLVRGGVDAAKASAS 180
VTCGESGPSGRHWHRKSPVPMLPVVAVADGL QFDIHLDGIDIVSVLVRGGVDAAKASAS
Sbjct 121 VTCGESGPSGRHWHRKSPVPMLPVVAVADGLHQFDIHLDGIDIVSVLVRGGVDAAKASAS 180
Query 181 LQEWEPQGWKSEERAGDRTVADRRRTWLVLRMNPQRNVAAVACRDSLASTLVAATERLVQ 240
LQEWEPQGWKSEERAGDRTVADRRRTWLVLRMNPQRNVAAVACRDSLASTLVAATERLVQ
Sbjct 181 LQEWEPQGWKSEERAGDRTVADRRRTWLVLRMNPQRNVAAVACRDSLASTLVAATERLVQ 240
Query 241 DLDGQSCAARPVTADELTEVDSAVLADLEPTWSRPGWRHLKHFNGYATSFWVTPSDITSE 300
DLDGQSCAARPVTADELTEVDSAVLADLEPTWSRPGWRHLKHFNGYATSFWVTPSDITSE
Sbjct 241 DLDGQSCAARPVTADELTEVDSAVLADLEPTWSRPGWRHLKHFNGYATSFWVTPSDITSE 300
Query 301 TLDELCLPDSPEVGTTVVTVRLTTRVGSPALSAWVRYHSDTRLPKEVAAGLNRLTGRQLA 360
TLDELCLPDSPEVGTTVVTVRLTTRVGSPALSAWVRYHSDTRLPKEVAAGLNRLTGRQLA
Sbjct 301 TLDELCLPDSPEVGTTVVTVRLTTRVGSPALSAWVRYHSDTRLPKEVAAGLNRLTGRQLA 360
Query 361 AVRASLPAPTHRPLLVIPSRNLRDHDELVLPVGQELEHATSSFVGQ 406
AVRASLPAPTHRPLLVIPSRNLRDHDELVLPVGQELEHATSSFVGQ
Sbjct 361 AVRASLPAPTHRPLLVIPSRNLRDHDELVLPVGQELEHATSSFVGQ 406
>gi|183982686|ref|YP_001850977.1| hypothetical protein MMAR_2679 [Mycobacterium marinum M]
gi|183176012|gb|ACC41122.1| conserved membrane protein [Mycobacterium marinum M]
Length=403
Score = 591 bits (1524), Expect = 6e-167, Method: Compositional matrix adjust.
Identities = 290/406 (72%), Positives = 335/406 (83%), Gaps = 3/406 (0%)
Query 1 MKAQRSFGLALSWPRVTAVFLVDVLILAVASHCPDSWQADHHVAWWVGVGVAAVVTLLSV 60
MKAQR FGLALSW R+T VF++D+LIL VASHCPDSWQ ++ +AWWVGVG+A +VTLLSV
Sbjct 1 MKAQRRFGLALSWARLTTVFVIDLLILIVASHCPDSWQGENRIAWWVGVGIAVLVTLLSV 60
Query 61 VSYHGITVISGLATWVRDWSADPGTTLGAGCTPAIDHQRRFGRDTVGVREYNGRLVSVIE 120
V+Y GITV SG+ W+ DWSADPGT LGAGCTPA+DHQRRFGRDTVGVRE++GRLV+VI
Sbjct 61 VTYRGITVTSGITAWLWDWSADPGTALGAGCTPAVDHQRRFGRDTVGVREHHGRLVTVIT 120
Query 121 VTCGESGPSGRHWHRKSPVPMLPVVAVADGLRQFDIHLDGIDIVSVLVRGGVDAAKASAS 180
V GE +GRH HR + ++PV VA+ LRQFD+ LDG+DIV+V VRGG +AA+ASAS
Sbjct 121 VDDGEGDAAGRHRHRTTQSAVVPVATVAENLRQFDVQLDGVDIVTVEVRGGAEAARASAS 180
Query 181 LQEWEPQGWKSEERAGDRTVADRRRTWLVLRMNPQRNVAAVACRDSLASTLVAATERLVQ 240
L EW P+ W G+ A+RRRTWL+LRMNPQRNVAA+A RDSLASTLV ATERL Q
Sbjct 181 LDEWGPEEWGM---VGESPAANRRRTWLILRMNPQRNVAAIASRDSLASTLVTATERLAQ 237
Query 241 DLDGQSCAARPVTADELTEVDSAVLADLEPTWSRPGWRHLKHFNGYATSFWVTPSDITSE 300
LDGQSCAARP+ ADEL EVDSA+LA+LEPTWSRPGWRHLKHFNGYATSFWVTP+DI +E
Sbjct 238 VLDGQSCAARPLAADELAEVDSAILAELEPTWSRPGWRHLKHFNGYATSFWVTPADINAE 297
Query 301 TLDELCLPDSPEVGTTVVTVRLTTRVGSPALSAWVRYHSDTRLPKEVAAGLNRLTGRQLA 360
TLDE+ L D+PEVG TV+T+RL R G P LSAWVRYHSD RLPKE++ GLNRLTGRQLA
Sbjct 298 TLDEVWLSDAPEVGATVLTLRLVMRAGEPRLSAWVRYHSDERLPKELSVGLNRLTGRQLA 357
Query 361 AVRASLPAPTHRPLLVIPSRNLRDHDELVLPVGQELEHATSSFVGQ 406
AVRASLP P+ R LV+ SR L DHDEL LPVGQ EHATS+ GQ
Sbjct 358 AVRASLPVPSTRAQLVVSSRELLDHDELELPVGQTQEHATSATTGQ 403
>gi|118618461|ref|YP_906793.1| hypothetical protein MUL_3078 [Mycobacterium ulcerans Agy99]
gi|118570571|gb|ABL05322.1| conserved membrane protein [Mycobacterium ulcerans Agy99]
Length=403
Score = 586 bits (1511), Expect = 2e-165, Method: Compositional matrix adjust.
Identities = 287/406 (71%), Positives = 333/406 (83%), Gaps = 3/406 (0%)
Query 1 MKAQRSFGLALSWPRVTAVFLVDVLILAVASHCPDSWQADHHVAWWVGVGVAAVVTLLSV 60
MKAQR FGLALSW R+T VF++D+LIL VASHCPDSWQ ++ +AWWVGVG+A +VTLLSV
Sbjct 1 MKAQRRFGLALSWARLTTVFVIDLLILIVASHCPDSWQGENRIAWWVGVGIAVLVTLLSV 60
Query 61 VSYHGITVISGLATWVRDWSADPGTTLGAGCTPAIDHQRRFGRDTVGVREYNGRLVSVIE 120
V+Y GITV SG+ W+ DWSADPGT LGAGCTPA+DHQRRFGRDTVGVRE++GRLV+VI
Sbjct 61 VTYRGITVTSGITAWLWDWSADPGTALGAGCTPAVDHQRRFGRDTVGVREHHGRLVTVIT 120
Query 121 VTCGESGPSGRHWHRKSPVPMLPVVAVADGLRQFDIHLDGIDIVSVLVRGGVDAAKASAS 180
V GE +GRH HR + ++PV VA+ LRQFD+ LDG+DI++V VRGG +AA+ASAS
Sbjct 121 VDDGEGDAAGRHRHRTTQSAVVPVATVAENLRQFDVQLDGVDIMTVEVRGGAEAARASAS 180
Query 181 LQEWEPQGWKSEERAGDRTVADRRRTWLVLRMNPQRNVAAVACRDSLASTLVAATERLVQ 240
L EW P+ W G+ A+RRRTWL+LRMNPQRNVAA+A RDSLASTLV ATERL Q
Sbjct 181 LDEWGPEEWGM---VGESPAANRRRTWLILRMNPQRNVAAIASRDSLASTLVTATERLAQ 237
Query 241 DLDGQSCAARPVTADELTEVDSAVLADLEPTWSRPGWRHLKHFNGYATSFWVTPSDITSE 300
LDGQSCAARP+ ADEL EVDS +LA+L PTWSRPGWRHLKHFNGYATSFWVTP+DI +E
Sbjct 238 VLDGQSCAARPLAADELAEVDSTILAELAPTWSRPGWRHLKHFNGYATSFWVTPADINAE 297
Query 301 TLDELCLPDSPEVGTTVVTVRLTTRVGSPALSAWVRYHSDTRLPKEVAAGLNRLTGRQLA 360
TLDE+ L D+PEVG TV+T+RL R G P LSAWVRYHSD RLPKE++ GLNRLTGRQLA
Sbjct 298 TLDEVWLSDAPEVGATVLTLRLVMRAGEPRLSAWVRYHSDERLPKELSVGLNRLTGRQLA 357
Query 361 AVRASLPAPTHRPLLVIPSRNLRDHDELVLPVGQELEHATSSFVGQ 406
AVRASLP P+ R LV+ SR L DHDEL LPVGQ EHATS+ GQ
Sbjct 358 AVRASLPVPSTRAQLVVSSRELLDHDELELPVGQTQEHATSATTGQ 403
>gi|254821014|ref|ZP_05226015.1| hypothetical protein MintA_13852 [Mycobacterium intracellulare
ATCC 13950]
Length=399
Score = 510 bits (1313), Expect = 2e-142, Method: Compositional matrix adjust.
Identities = 274/395 (70%), Positives = 317/395 (81%), Gaps = 9/395 (2%)
Query 1 MKAQRSFGLALSWPRVTAVFLVDVLILAVASHCPDSWQADHHVAWWVGVGVAAVVTLLSV 60
MKAQR FGL+LSW R+T VFLVDV+I+AVASHCP+SWQ + VA+WVGVG+A +V LLS+
Sbjct 1 MKAQRRFGLSLSWSRLTTVFLVDVVIMAVASHCPESWQGTYRVAFWVGVGLAVLVALLSL 60
Query 61 VSYHGITVISGLATWVRDWSADPGTTLGAGCTPAIDHQRRFGRDTVGVREYNGRLVSVIE 120
V+YHG+TV SG+ATW+ DWSADPG+ L AGCTPAIDHQRRFGRD VGVREY G+LV+VI
Sbjct 61 VTYHGLTVTSGIATWLWDWSADPGSALAAGCTPAIDHQRRFGRDKVGVREYQGQLVTVIA 120
Query 121 VTCGESGPSGRHWHRKSPVPMLPVVAVADGLRQFDIHLDGIDIVSVLVRGGVDAAKASAS 180
V GE P+ RH HR S P L V AVA GLRQFDIHLD IDIVSV VR G +AA+ S
Sbjct 121 VNGGEDDPASRHRHRSSR-PTLLVQAVASGLRQFDIHLDDIDIVSVKVRRGGNAAELS-K 178
Query 181 LQEWEPQGWKSEERAGDRTVADRRRTWLVLRMNPQRNVAAVACRDSLASTLVAATERLVQ 240
L +W P+ W E A D+ + RRTWLVLRMNPQRNVAAVA RDSLASTLVAATERL Q
Sbjct 179 LDDWGPEEW---EVANDQPTSYVRRTWLVLRMNPQRNVAAVAARDSLASTLVAATERLAQ 235
Query 241 DLDGQSCAARPVTADELTEVDSAVLADLEPTWSRPGWRHLKHFNGYATSFWVTPSDITSE 300
DLDG +CAARP+TA+EL EVD AVLADLEPTWSRPGWR LKHFNG+ TS W+TPSDIT++
Sbjct 236 DLDGLTCAARPLTAEELAEVDRAVLADLEPTWSRPGWRRLKHFNGFVTSLWLTPSDITTD 295
Query 301 TLDELCLPDSPEVGTTVVTVRLTTRVGSPALSAWVRYHSDTRLPKEVAAGLNRLTGRQLA 360
L+EL D+ TV+T+RLT+R G P +SAWVRYH++ RL + V++GLNRLTGRQLA
Sbjct 296 KLEELWEDDT---FATVLTIRLTSRGGRPQVSAWVRYHTEKRLRRNVSSGLNRLTGRQLA 352
Query 361 AVRASLPAPTHRPLLVIPSRNLR-DHDELVLPVGQ 394
AVRASLPAPT RPLL +PSR LR D DEL L V Q
Sbjct 353 AVRASLPAPTARPLLSVPSRPLRADDDELSLSVDQ 387
>gi|41407610|ref|NP_960446.1| hypothetical protein MAP1512 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41395963|gb|AAS03829.1| hypothetical protein MAP_1512 [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=402
Score = 509 bits (1312), Expect = 2e-142, Method: Compositional matrix adjust.
Identities = 269/409 (66%), Positives = 314/409 (77%), Gaps = 10/409 (2%)
Query 1 MKAQRSFGLALSWPRVTAVFLVDVLILAVASHCPDSWQADHHVAWWVGVGVAAVVTLLSV 60
MKAQR GL+L+WPR+T VFLVD++I+ VASHCP+SWQ + +A+WVGVG+A +VTLLS+
Sbjct 1 MKAQRRLGLSLTWPRLTTVFLVDIVIMVVASHCPESWQGTYRIAFWVGVGLAVLVTLLSL 60
Query 61 VSYHGITVISGLATWVRDWSADPGTTLGAGCTPAIDHQRRFGRDTVGVREYNGRLVSVIE 120
V+YHGITV SGLATW+ DWSADPG+ L AGCTPA+DHQRRFGRD VGVREY G+LVSVI
Sbjct 61 VTYHGITVASGLATWLWDWSADPGSALAAGCTPALDHQRRFGRDKVGVREYKGQLVSVIA 120
Query 121 VTCGESGPSGRHWHRKSPVPMLPVVAVADGLRQFDIHLDGIDIVSVLV-RGGVDAAKASA 179
V GE RH HR + P L V AVA GLRQFDIHLD IDIVSV V RGG DA A
Sbjct 121 VNGGEDETGSRHRHRAAS-PTLLVAAVASGLRQFDIHLDDIDIVSVKVRRGGPDARSAEL 179
Query 180 S-LQEWEPQGWKSEERAGDRTVADRRRTWLVLRMNPQRNVAAVACRDSLASTLVAATERL 238
S L + P+ W + GD + RRTWLVLRMNPQRNVAAVA RDSLASTLVAATERL
Sbjct 180 SKLDNFGPEEW---DVVGDEPTSYIRRTWLVLRMNPQRNVAAVAARDSLASTLVAATERL 236
Query 239 VQDLDGQSCAARPVTADELTEVDSAVLADLEPTWSRPGWRHLKHFNGYATSFWVTPSDIT 298
QDLDG +CAARP+TA+E+ EVD AVLADLEPTWSRPGWR LKHFNG+ TS W++PSDIT
Sbjct 237 AQDLDGLTCAARPLTAEEIAEVDRAVLADLEPTWSRPGWRRLKHFNGFVTSLWLSPSDIT 296
Query 299 SETLDELCLPDSPEVGTTVVTVRLTTRVGSPALSAWVRYHSDTRLPKEVAAGLNRLTGRQ 358
++ L+EL D+ TV+T+RLT R G P +SAWVRYH++ RL + +++GLNRLTGRQ
Sbjct 297 TDKLEELWDDDT---FATVLTIRLTARAGRPHVSAWVRYHTEKRLRRNISSGLNRLTGRQ 353
Query 359 LAAVRASLPAPTHRPLLVIPSRNLR-DHDELVLPVGQELEHATSSFVGQ 406
LAAVRASLP PT RPLL +PSR LR D DEL L + E A V Q
Sbjct 354 LAAVRASLPVPTARPLLEVPSRPLRADDDELSLSLAAPRESAAGVPVAQ 402
>gi|118465331|ref|YP_882103.1| hypothetical protein MAV_2917 [Mycobacterium avium 104]
gi|118166618|gb|ABK67515.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=402
Score = 508 bits (1309), Expect = 5e-142, Method: Compositional matrix adjust.
Identities = 267/402 (67%), Positives = 313/402 (78%), Gaps = 10/402 (2%)
Query 1 MKAQRSFGLALSWPRVTAVFLVDVLILAVASHCPDSWQADHHVAWWVGVGVAAVVTLLSV 60
MKAQR GL+L+WPR+T VFLVD++I+ VASHCP+SWQ + +A+WVGVG+A +VTLLS+
Sbjct 1 MKAQRRLGLSLTWPRLTTVFLVDIVIMVVASHCPESWQGTYRIAFWVGVGLAVLVTLLSL 60
Query 61 VSYHGITVISGLATWVRDWSADPGTTLGAGCTPAIDHQRRFGRDTVGVREYNGRLVSVIE 120
V+YHGITV SGLATW+ DWSADPG+ L AGCTPA+DHQRRFGRD VGVREY G+LVSVI
Sbjct 61 VTYHGITVASGLATWLWDWSADPGSALAAGCTPALDHQRRFGRDKVGVREYKGQLVSVIA 120
Query 121 VTCGESGPSGRHWHRKSPVPMLPVVAVADGLRQFDIHLDGIDIVSVLV-RGGVDAAKASA 179
V GE RH HR + P L V AVA GLRQFDIHLD IDIVSV V RGG DA A
Sbjct 121 VNGGEDETGSRHRHRAAS-PTLLVAAVASGLRQFDIHLDDIDIVSVKVRRGGPDARSAEL 179
Query 180 S-LQEWEPQGWKSEERAGDRTVADRRRTWLVLRMNPQRNVAAVACRDSLASTLVAATERL 238
S L ++ P+ W + GD + RRTWLVLRMNPQRNVAAVA RDSLASTLVAATERL
Sbjct 180 SKLDDFGPEEW---DVVGDEPTSYIRRTWLVLRMNPQRNVAAVAARDSLASTLVAATERL 236
Query 239 VQDLDGQSCAARPVTADELTEVDSAVLADLEPTWSRPGWRHLKHFNGYATSFWVTPSDIT 298
QDLDG +CAARP+TA+E+ EVD AVLADLEPTWSRPGWR LKHFNG+ TS W++PSDIT
Sbjct 237 AQDLDGLTCAARPLTAEEIAEVDRAVLADLEPTWSRPGWRRLKHFNGFVTSLWLSPSDIT 296
Query 299 SETLDELCLPDSPEVGTTVVTVRLTTRVGSPALSAWVRYHSDTRLPKEVAAGLNRLTGRQ 358
++ L+EL D+ TV+T+RLT R G P +SAWVRYH++ RL + +++GLNRLTGRQ
Sbjct 297 TDKLEELWDDDT---FATVLTIRLTARAGRPHVSAWVRYHTEKRLRRNISSGLNRLTGRQ 353
Query 359 LAAVRASLPAPTHRPLLVIPSRNLR-DHDELVLPVGQELEHA 399
LAAVRASLP PT RPLL +PSR LR D DEL L + E A
Sbjct 354 LAAVRASLPVPTARPLLEVPSRPLRADDDELSLSLAAPRESA 395
>gi|336457561|gb|EGO36566.1| type VII secretion protein EccE [Mycobacterium avium subsp. paratuberculosis
S397]
Length=402
Score = 508 bits (1308), Expect = 7e-142, Method: Compositional matrix adjust.
Identities = 268/409 (66%), Positives = 313/409 (77%), Gaps = 10/409 (2%)
Query 1 MKAQRSFGLALSWPRVTAVFLVDVLILAVASHCPDSWQADHHVAWWVGVGVAAVVTLLSV 60
MKAQR GL+L+WPR+T VFLVD++I+ VASHCP+SWQ + +A+WVGVG+A +VTLLS+
Sbjct 1 MKAQRRLGLSLTWPRLTTVFLVDIVIMVVASHCPESWQGTYRIAFWVGVGLAVLVTLLSL 60
Query 61 VSYHGITVISGLATWVRDWSADPGTTLGAGCTPAIDHQRRFGRDTVGVREYNGRLVSVIE 120
V+YHGITV SGLATW+ DWSADPG+ L AGCTPA+DHQRRFGRD VGVREY G+LVSVI
Sbjct 61 VTYHGITVASGLATWLWDWSADPGSALAAGCTPALDHQRRFGRDKVGVREYKGQLVSVIA 120
Query 121 VTCGESGPSGRHWHRKSPVPMLPVVAVADGLRQFDIHLDGIDIVSVLV-RGGVDAAKASA 179
V GE RH HR + P L V AVA GLRQFDIHLD IDIVSV V RGG DA A
Sbjct 121 VNGGEDETGSRHRHRAAS-PTLLVAAVASGLRQFDIHLDDIDIVSVKVRRGGPDARSAEL 179
Query 180 S-LQEWEPQGWKSEERAGDRTVADRRRTWLVLRMNPQRNVAAVACRDSLASTLVAATERL 238
S L + P+ W + GD + RRTWLVLRMNPQRNVAAVA RDSLASTLVAATERL
Sbjct 180 SKLDNFGPEEW---DVVGDEPTSYIRRTWLVLRMNPQRNVAAVAARDSLASTLVAATERL 236
Query 239 VQDLDGQSCAARPVTADELTEVDSAVLADLEPTWSRPGWRHLKHFNGYATSFWVTPSDIT 298
QDLDG +CAARP+TA+E+ EVD AVLADLEPTWSRPGWR LKHFNG+ TS W++PSDIT
Sbjct 237 AQDLDGLTCAARPLTAEEIAEVDRAVLADLEPTWSRPGWRRLKHFNGFVTSLWLSPSDIT 296
Query 299 SETLDELCLPDSPEVGTTVVTVRLTTRVGSPALSAWVRYHSDTRLPKEVAAGLNRLTGRQ 358
++ L+EL D+ TV+T+RLT R G P +SAWVRYH++ RL + +++GLNRLTGRQ
Sbjct 297 TDKLEELWDDDT---FATVLTIRLTARAGRPHVSAWVRYHTEKRLRRNISSGLNRLTGRQ 353
Query 359 LAAVRASLPAPTHRPLLVIPSRNLR-DHDELVLPVGQELEHATSSFVGQ 406
LAAVR SLP PT RPLL +PSR LR D DEL L + E A V Q
Sbjct 354 LAAVRVSLPVPTARPLLEVPSRPLRADDDELSLSLAAPRESAAGVPVAQ 402
>gi|296164785|ref|ZP_06847346.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295899862|gb|EFG79307.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=406
Score = 507 bits (1306), Expect = 1e-141, Method: Compositional matrix adjust.
Identities = 272/383 (72%), Positives = 315/383 (83%), Gaps = 8/383 (2%)
Query 1 MKAQRSFGLALSWPRVTAVFLVDVLILAVASHCPDSWQADHHVAWWVGVGVAAVVTLLSV 60
MKAQR FGL+LSWPRVTAVFLVD+ I+ VASHCP+SWQ + +A+WVGVG+AA+V LLS+
Sbjct 9 MKAQRRFGLSLSWPRVTAVFLVDIAIMVVASHCPESWQGTYRIAFWVGVGLAALVALLSL 68
Query 61 VSYHGITVISGLATWVRDWSADPGTTLGAGCTPAIDHQRRFGRDTVGVREYNGRLVSVIE 120
++YHG+TV SGLATW+ DWSADPGT LGAGCTPA+D+QRRFGRD VGVRE+ G+LVSVI
Sbjct 69 ITYHGVTVTSGLATWLWDWSADPGTALGAGCTPALDYQRRFGRDRVGVREHEGQLVSVIA 128
Query 121 VTCGESGPSGRHWHRKSPVPMLPVVAVADGLRQFDIHLDGIDIVSVLVRGGVDAAKASAS 180
+ GE PS RH HR SP P L V AVADGLRQFDIHLD I+IVSV VR G +AA+ S
Sbjct 129 LNGGEGDPSSRHRHRTSP-PTLLVQAVADGLRQFDIHLDDIEIVSVKVRRGGNAAELS-K 186
Query 181 LQEWEPQGWKSEERAGDRTVADRRRTWLVLRMNPQRNVAAVACRDSLASTLVAATERLVQ 240
L ++ P+ W E A + RRTWLVLRMNPQRN+AAVA RDSLASTLVAATERL Q
Sbjct 187 LDDFGPEEW---EVANGEPTSFVRRTWLVLRMNPQRNIAAVAVRDSLASTLVAATERLAQ 243
Query 241 DLDGQSCAARPVTADELTEVDSAVLADLEPTWSRPGWRHLKHFNGYATSFWVTPSDITSE 300
DLDG +CAARP+TA+ELTEVD AVLADLEPTWSRPGWR LKHFNG+ TSFWVTPSDIT++
Sbjct 244 DLDGLTCAARPLTAEELTEVDRAVLADLEPTWSRPGWRRLKHFNGFTTSFWVTPSDITTD 303
Query 301 TLDELCLPDSPEVGTTVVTVRLTTRVGSPALSAWVRYHSDTRLPKEVAAGLNRLTGRQLA 360
TLDEL D+ TV+TVRLT+R G P +SAWVRYHS+ RLP++V+AGLNRLTGRQLA
Sbjct 304 TLDELWQADTV---ATVLTVRLTSRAGRPQVSAWVRYHSEKRLPRDVSAGLNRLTGRQLA 360
Query 361 AVRASLPAPTHRPLLVIPSRNLR 383
AVRAS+PAP R LV+PSR LR
Sbjct 361 AVRASMPAPATRAPLVVPSRVLR 383
>gi|15827807|ref|NP_302070.1| hypothetical protein ML1537 [Mycobacterium leprae TN]
gi|221230284|ref|YP_002503700.1| putative secreted protein [Mycobacterium leprae Br4923]
gi|13093359|emb|CAC30488.1| possible secreted protein [Mycobacterium leprae]
gi|219933391|emb|CAR71632.1| possible secreted protein [Mycobacterium leprae Br4923]
Length=401
Score = 495 bits (1275), Expect = 5e-138, Method: Compositional matrix adjust.
Identities = 276/406 (68%), Positives = 310/406 (77%), Gaps = 5/406 (1%)
Query 1 MKAQRSFGLALSWPRVTAVFLVDVLILAVASHCPDSWQADHHVAWWVGVGVAAVVTLLSV 60
MKAQR GLALSW RVT VF+V +++L +ASH P+ WQA HHVAW VGVG+ VV +L +
Sbjct 1 MKAQRRLGLALSWSRVTTVFVVAIVVLVLASHVPELWQAGHHVAWCVGVGITVVVMVLVL 60
Query 61 VSYHGITVISGLATWVRDWSADPGTTLGAGCTPAIDHQRRFGRDTVGVREYNGRLVSVIE 120
VSYHGIT++SGLATWV D ADP L AGCTPAIDHQRRFGRD VGVREY GRLV+VI
Sbjct 61 VSYHGITLMSGLATWVWDCFADPRAALAAGCTPAIDHQRRFGRDVVGVREYKGRLVTVIA 120
Query 121 VTCGESGPSGRHWHRKSPVPMLPVVAVADGLRQFDIHLDGIDIVSVLVRGGVDAAKASAS 180
V GE P GRH HR +P LPV AVADGLRQFDI LD IDIVSV +R G +AAK SA
Sbjct 121 VDDGEDDPVGRHRHRTTPAG-LPVQAVADGLRQFDIRLDSIDIVSVKIRRGGNAAKFSA- 178
Query 181 LQEWEPQGWKSEERAGDRTVADRRRTWLVLRMNPQRNVAAVACRDSLASTLVAATERLVQ 240
L W + W +R TWLVLRMNPQ NV AVA RDSLASTLVAATERL Q
Sbjct 179 LDNWGSEEWGLVCACPPTY---QRCTWLVLRMNPQHNVVAVAARDSLASTLVAATERLAQ 235
Query 241 DLDGQSCAARPVTADELTEVDSAVLADLEPTWSRPGWRHLKHFNGYATSFWVTPSDITSE 300
DLDGQ+CAARP+ A EL EVDSAVLADLEPTWS PGWRH+K+ NG+ATSFWVTPSDI SE
Sbjct 236 DLDGQNCAARPLAAGELAEVDSAVLADLEPTWSYPGWRHIKYVNGFATSFWVTPSDIDSE 295
Query 301 TLDELCLPDSPEVGTTVVTVRLTTRVGSPALSAWVRYHSDTRLPKEVAAGLNRLTGRQLA 360
TL+EL L D P++ TV+T+RL +R LSAWVR+HS+TRL KE GLN+LTGRQLA
Sbjct 296 TLNELWLSDLPDIKATVITIRLASRSCQTRLSAWVRHHSETRLSKEACRGLNQLTGRQLA 355
Query 361 AVRASLPAPTHRPLLVIPSRNLRDHDELVLPVGQELEHATSSFVGQ 406
AVRASLPAP RP+LV+PSR L DHDELVLPVGQ E + S F GQ
Sbjct 356 AVRASLPAPATRPVLVVPSRELSDHDELVLPVGQGREGSASLFAGQ 401
>gi|254775392|ref|ZP_05216908.1| hypothetical protein MaviaA2_12086 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=392
Score = 493 bits (1268), Expect = 3e-137, Method: Compositional matrix adjust.
Identities = 260/399 (66%), Positives = 307/399 (77%), Gaps = 10/399 (2%)
Query 11 LSWPRVTAVFLVDVLILAVASHCPDSWQADHHVAWWVGVGVAAVVTLLSVVSYHGITVIS 70
++WPR+T VFLVD++I+ VASHCP+SWQ + +A+WVGVG+A +VTLLS+V+YHGITV S
Sbjct 1 MTWPRLTTVFLVDIVIMVVASHCPESWQGTYRIAFWVGVGLAVLVTLLSLVTYHGITVAS 60
Query 71 GLATWVRDWSADPGTTLGAGCTPAIDHQRRFGRDTVGVREYNGRLVSVIEVTCGESGPSG 130
GLATW+ DWSADPG+ L AGCTPA+DHQRRFGRD VGVREY G+LVSVI V G+
Sbjct 61 GLATWLWDWSADPGSALAAGCTPALDHQRRFGRDKVGVREYKGQLVSVIAVNGGDDETGS 120
Query 131 RHWHRKSPVPMLPVVAVADGLRQFDIHLDGIDIVSVLV-RGGVDAAKASAS-LQEWEPQG 188
RH HR + P L V AVA GLRQFDIHLD IDIVSV V RGG DA A S L ++ P+
Sbjct 121 RHRHRAAS-PTLLVAAVASGLRQFDIHLDDIDIVSVKVRRGGPDARSAELSKLDDFGPEE 179
Query 189 WKSEERAGDRTVADRRRTWLVLRMNPQRNVAAVACRDSLASTLVAATERLVQDLDGQSCA 248
W + GD + RRTWLVLRMNPQRNVAAVA RDSLASTLVAATERL QDLDG +CA
Sbjct 180 W---DVVGDEPASYIRRTWLVLRMNPQRNVAAVAARDSLASTLVAATERLAQDLDGLTCA 236
Query 249 ARPVTADELTEVDSAVLADLEPTWSRPGWRHLKHFNGYATSFWVTPSDITSETLDELCLP 308
ARP+TA+E+ EVD AVLADLEPTWSRPGWR LKHFNG+ TS W++PSDIT++ L+EL
Sbjct 237 ARPLTAEEIAEVDRAVLADLEPTWSRPGWRRLKHFNGFVTSLWLSPSDITTDKLEELWDD 296
Query 309 DSPEVGTTVVTVRLTTRVGSPALSAWVRYHSDTRLPKEVAAGLNRLTGRQLAAVRASLPA 368
D+ TV+T+RLT R G P +SAWVRYH++ RL + +++GLNRLTGRQLAAVRASLP
Sbjct 297 DT---FATVLTIRLTARAGRPHVSAWVRYHTEKRLRRNISSGLNRLTGRQLAAVRASLPV 353
Query 369 PTHRPLLVIPSRNLR-DHDELVLPVGQELEHATSSFVGQ 406
PT RPLL +PSR LR D DEL L + E A V Q
Sbjct 354 PTARPLLEVPSRPLRADDDELSLSLAAPRESAAGVPVAQ 392
>gi|342861299|ref|ZP_08717947.1| hypothetical protein MCOL_20546 [Mycobacterium colombiense CECT
3035]
gi|342131199|gb|EGT84480.1| hypothetical protein MCOL_20546 [Mycobacterium colombiense CECT
3035]
Length=392
Score = 468 bits (1204), Expect = 9e-130, Method: Compositional matrix adjust.
Identities = 251/387 (65%), Positives = 306/387 (80%), Gaps = 10/387 (2%)
Query 11 LSWPRVTAVFLVDVLILAVASHCPDSWQADHHVAWWVGVGVAAVVTLLSVVSYHGITVIS 70
+SWPR+T VF+VDV+I+ VASHCP+SWQ + +A+WVGVG+A +VTLLS+V+YHG+TV S
Sbjct 1 MSWPRLTTVFVVDVVIMVVASHCPESWQGTYRIAFWVGVGLAVLVTLLSLVTYHGLTVTS 60
Query 71 GLATWVRDWSADPGTTLGAGCTPAIDHQRRFGRDTVGVREYNGRLVSVIEVTCGESGPSG 130
GLATW+ DWSADPG+ L AGCTPA+D+QR++GRD VGVR++ G+LV+VI + G+ +
Sbjct 61 GLATWLWDWSADPGSALSAGCTPALDYQRKYGRDKVGVRQHEGQLVTVIAINGGDDDSAS 120
Query 131 RHWHRKSPVPMLPVVAVADGLRQFDIHLDGIDIVSVLVRGGVDAAKAS--ASLQEWEPQG 188
R HR SP P L V AVA GLRQFD+HLD +DIV+V VR G AKA+ + L ++ P+
Sbjct 121 RLRHRNSP-PTLLVSAVASGLRQFDVHLDDVDIVAVKVRRGGPEAKAAELSKLDDFGPEE 179
Query 189 WKSEERAGDRTVADRRRTWLVLRMNPQRNVAAVACRDSLASTLVAATERLVQDLDGQSCA 248
W E A + RRTWLVLRMNPQRNVAAVA RDSLASTLVAATERL QDLDG +CA
Sbjct 180 W---EVANGEPTSYIRRTWLVLRMNPQRNVAAVAARDSLASTLVAATERLAQDLDGLTCA 236
Query 249 ARPVTADELTEVDSAVLADLEPTWSRPGWRHLKHFNGYATSFWVTPSDITSETLDELCLP 308
ARP+TA+EL EVD AVLADLEPTWSRPGWR LKHFNG+ TS W++PSDIT++ LDEL
Sbjct 237 ARPLTAEELAEVDRAVLADLEPTWSRPGWRRLKHFNGFVTSLWLSPSDITTDKLDELW-- 294
Query 309 DSPEVGTTVVTVRLTTRVGSPALSAWVRYHSDTRLPKEVAAGLNRLTGRQLAAVRASLPA 368
E TV+T+RLT+R G P +SAWVRYH++ RL + V++GLNRLTGRQLAAVRASLPA
Sbjct 295 -EDETVATVLTIRLTSRGGRPQVSAWVRYHTEKRLRRNVSSGLNRLTGRQLAAVRASLPA 353
Query 369 PTHRPLLVIPSRNLR-DHDELVLPVGQ 394
PT RPLLV+PSR LR D D+L L V Q
Sbjct 354 PTARPLLVVPSRPLRADDDDLALSVDQ 380
>gi|333990540|ref|YP_004523154.1| hypothetical protein JDM601_1900 [Mycobacterium sp. JDM601]
gi|333486508|gb|AEF35900.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=374
Score = 276 bits (707), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 173/387 (45%), Positives = 234/387 (61%), Gaps = 24/387 (6%)
Query 16 VTAVFLVDVLILAVASHCPDSWQADHHVAWWVGVGVAAVVTLLSVVSYHGITVISGLATW 75
+T VFL+D+ IL +A P Q + AWW GVGVA +V ++++V+Y + + + A W
Sbjct 1 MTIVFLIDIGILVLAGRWPGDEQVAVY-AWWSGVGVAVLVAIIALVTYRQVPISTMWAAW 59
Query 76 VRDWSADPGTTLGAGCTPAIDHQRRFGRDTVGVREYNGRLVSVIEVTCGESGPSGRHWHR 135
D AD T L G TPA+DH RRFGR+ +G+RE+ GRLV+VI V +GRH
Sbjct 60 FADQFADTETALSRGRTPAVDHHRRFGREPIGMREHQGRLVTVIAVGGRPVQATGRHRRG 119
Query 136 KSPVPMLPVVAVADGLRQFDIHLDGIDIVSVLVRGGVDAAKASASLQEWEPQGWKSEERA 195
P LP+ +A GLRQFD+ LD IDIVSV R P+ + +
Sbjct 120 LEPA-ALPLERLAGGLRQFDVRLDSIDIVSVGTRSA--------------PRDSEDVDFD 164
Query 196 GDRTVADRRRTWLVLRMNPQRNVAAVACRDSLASTLVAATERLVQDLDGQSCAARPVTAD 255
++ D RRTWLVLRM+PQ NV AVA RDSLA+TL AATERL +++DG+ +ARP+ AD
Sbjct 165 DTPSMPDHRRTWLVLRMDPQHNVNAVAARDSLAATLTAATERLAEEIDGRLISARPLRAD 224
Query 256 ELTEVDSAVLADLEPTWSRPGWRHLKHF-NGYATSFWVTPSDITSETLDELCLPDSPEVG 314
E +VD A LA LE ++ R ++ G+ T+FW++P+DIT E L+ L PE
Sbjct 225 EFDDVDEATLAGLEA--AQLSHRLFRNRPEGHVTNFWLSPADITDENLEHLWY---PETD 279
Query 315 TTVVTVRLTTRVG-SPALSAWVRYHSDTRLPKEVAAGLNRLTG-RQLAAVRASLPAPTHR 372
TVVTVRL G + ++S VRYHS +L + V A LNR G RQL AV ASLPAPT
Sbjct 280 ATVVTVRLAPGGGRTTSVSVLVRYHSAGKLGRNVRAALNRFVGRRQLEAVCASLPAPTSH 339
Query 373 PLLVIPSRNLRDHDELVLPVGQELEHA 399
P + +P R+L++ + LV+ V E+A
Sbjct 340 PRMPVPGRDLQNGEHLVVSVDALQEYA 366
>gi|333991968|ref|YP_004524582.1| hypothetical protein JDM601_3328 [Mycobacterium sp. JDM601]
gi|333487936|gb|AEF37328.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=403
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 181/398 (46%), Positives = 236/398 (60%), Gaps = 14/398 (3%)
Query 1 MKAQRSFGLALSWPRVTAVFLVDVLILAVASHCPDSWQADHHVAWWVGVGVAAVVTLLSV 60
MKAQ SFGL LSW RVT VFL+D+ IL +A H P + AWW GVGVA VVT ++
Sbjct 1 MKAQHSFGLNLSWLRVTTVFLIDLAILRLAGHWPTELGSPAR-AWWPGVGVAVVVTAAAL 59
Query 61 VSYHGITVISGLATWVRDWSADPGTTLGAGCTPAIDHQRRFGRDTVGVREYNGRLVSVIE 120
+++ + + S + V D A+P T L GCTP DH+RR+ D VG+RE+ G+LV+VI
Sbjct 60 ITHRRVPLTSIVLARVLDRFANPATFLNEGCTPGFDHRRRYSHDVVGLREHRGQLVTVIA 119
Query 121 VTCGESGPSGRHWHRKSPVPMLPVVAVADGLRQFDIHLDGIDIVSVLVRGGVDAAKASAS 180
V + SGRH R P+ LP A LRQFD+ LDGIDIVSV D + S
Sbjct 120 VAPPPAA-SGRHARRHQPLGALPAGLAAAALRQFDVRLDGIDIVSVRT---CDTTCDATS 175
Query 181 LQEWEPQGWKSEERAGDRTVADRRRTWLVLRMNPQRNVAAVACRDSLASTLVAATERLVQ 240
+ + + E+ A R TWL+LRM+P RN AVA RDS+A+TL AATERL Q
Sbjct 176 DGDTDTGPAEDEQAPAVPDTAGPRDTWLILRMDPMRNAEAVAVRDSVAATLAAATERLAQ 235
Query 241 DLDGQSCAARPVTADELTEVDSAVLADLEPTWSRPGWRHL--KHFNG---YATSFWVTPS 295
L + R + A+E +VD+ VLA L+PT R R L KH G YA +FW++P
Sbjct 236 TLQERHIVTRVLPAEEFGQVDATVLAGLQPTRIRRRRRRLKQKHRKGPRQYAATFWMSPR 295
Query 296 DITSETLDELCLPDSPEVGTTVVTVRLTTRVGSPALSAWVRYHSDTRLPKEVAAGLNRLT 355
DIT+ L++L TT VTVRL + +S VRYH+ +RL + + AGLNRL
Sbjct 296 DITTANLEQLW---QRAADTTAVTVRLIAQHNHTDVSVLVRYHTGSRLRRNMWAGLNRLN 352
Query 356 GRQLAAVRASLPAPTHRPLLVIPSRNLRDHDELVLPVG 393
GRQL A+R SLP P R L +P+R L DH+ L +P+G
Sbjct 353 GRQLTALRTSLPTPMRR-TLAVPARQLDDHEPLQVPLG 389
>gi|240169213|ref|ZP_04747872.1| hypothetical protein MkanA1_07864 [Mycobacterium kansasii ATCC
12478]
gi|296165326|ref|ZP_06847868.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295899342|gb|EFG78806.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=530
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 133/398 (34%), Positives = 206/398 (52%), Gaps = 33/398 (8%)
Query 1 MKAQRSFGLALSWPRVTAVFLVDVLILAVASHCPDSWQADHHVAWWVGVGVAAVVTLLSV 60
M+ +A WPR+ A+F+VDV ++A + WW G +A VV+LL++
Sbjct 1 MRTTFPLSVAAGWPRLVALFVVDVALVATGAAVAG------RPGWWAGAALALVVSLLAL 54
Query 61 VSYHGITVISGLATW----VRDWSADPGTTLGAGCTPAIDHQRRFGRDTVGVREYNGRLV 116
+ + G +++ W R + PG L D++R FG VG+R LV
Sbjct 55 LRWRGAALLT--LAWRSVSKRHVADLPGGELA-------DYERHFGSGRVGIRAVGPHLV 105
Query 117 SVIEVTCGESGPSGRHWHRKSPVPMLPVVAVADGLRQFDIHLDGIDIVSVLVRGGVDAAK 176
+V+ V PS + R + LP+ AVA GL QFD+ L+GIDIVS VR +
Sbjct 106 AVVAVDGPPHSPSALDYSRVESMTKLPLEAVAAGLEQFDVTLEGIDIVSAGVR------R 159
Query 177 ASASLQEWEPQGWKSEERAGDRTVADRRRTWLVLRMNPQRNVAAVACRDSLASTLVAATE 236
AS S + P GD +RRTWLV+R++ + A+ R+S+A+T+ AA E
Sbjct 160 ASKSHHPYAP---VYSGAVGDHPAVGQRRTWLVVRLDALASARAIVWRESVAATMSAAAE 216
Query 237 RLVQDLDGQSCAARPVTADELTEVDSAVLADLEPTWSRPGWRHLKHFNGYATSFWVTPSD 296
L +L AR +TA ++ D A+LA ++P PGW L+H GY ++W++P D
Sbjct 217 WLAAELTSLRIPARVLTAAQIRSADEALLAGIDPNGLTPGWSRLRHAGGYVQTYWMSPRD 276
Query 297 ITSETLDELCLPDSPEVGTTVVTVRL-TTRVGSPALSAWVRYHSDTRLPKEVAAGLNRLT 355
I+S T+D L +PE TVV++++ G+ A+ VRYHS L + GLN
Sbjct 277 ISSTTIDRLW---APETAATVVSIQVRRADTGATAVGVMVRYHSGGPLAEPPLTGLNPFV 333
Query 356 GRQLAAVRASLPAPTHRPLLVIPSRNLRDHDELVLPVG 393
GR A +RA L + + L +P+R L ++++ +P+G
Sbjct 334 GRHDAGLRAGLLSAGNGG-LAVPARELAANEKVAVPIG 370
>gi|296165445|ref|ZP_06847981.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295899185|gb|EFG78655.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=581
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 125/449 (28%), Positives = 184/449 (41%), Gaps = 110/449 (24%)
Query 14 PRVTAVFLVDVLILAVASHCPDSWQADHHVAWWVGVGVAAVVTLLSVVSYHGITVISGLA 73
P + AV +V+ +A + P + WW + V +L V+ H A
Sbjct 10 PALGAVLGAEVIGIAAFATLPT-----YRYGWWPATAITVVALILLAVTVHR----RNAA 60
Query 74 TWVRD---WSADPGTTLGAGCTPAIDHQRRFGRDTVGVREYNGRLVSVIEVTCGESGPSG 130
WVRD W T AG I H G GVR + V++IEV P+
Sbjct 61 IWVRDRSRWLRGRRHTTAAGAAVDISH----GGGVYGVRTADNEAVTMIEVDGRAYSPT- 115
Query 131 RHWHRKSPVPM----LPVVAVADGLRQ-FDIHLDGIDIVSV--LVRGGVDAAKASASLQE 183
+ R S + + LP+ V + Q +HL G+DIVS VR G ++L
Sbjct 116 --YLRGSTLSLTDNLLPLNVVMGLMEQPGGLHL-GVDIVSAGYRVRPGTGYPHLYSTL-- 170
Query 184 WEPQGWKSEERAGDRTVADRRRTWLVLRMNPQRNVAAVACRDSLASTLVAATERLVQDLD 243
DR A +R T L++R++ +V + R S+ S AATER+V+ L+
Sbjct 171 -----------LADRGAAGQRSTHLIVRLDITESVRGLMYRRSIGSAAAAATERIVKALE 219
Query 244 GQSCAARPVTADELTEVDSAVLADLEPTWSRP---------------------------- 275
+ C AR ++A E A+L L +RP
Sbjct 220 QEGCRARALSAQE----QDAMLDKLSMGLARPPERPVVVDDAEDSEDLETAMTATSAPLI 275
Query 276 --GWRHL-----------------------KHFN---GYATSFWVTPSDITSETLDELCL 307
G RH K N GY TS++ +P DIT+E+ +++
Sbjct 276 AVGSRHRRNGRAEAASPRAQVVRPTAEVGWKSINAKPGYVTSYYFSPEDITTESFNQMWS 335
Query 308 PDSPEVGTTVVTVRLTTRVGSP-ALSAWVRYHSDTRLPKEVAA-GLNRLTGRQL-AAVRA 364
S ++ V + L + G P A+SA VR + D R P++ LN L G Q AA+RA
Sbjct 336 LRSDDL---VHVMMLRKKPGGPVAVSALVRTN-DPRPPEQPPTLFLNPLPGSQYDAALRA 391
Query 365 SLPAPTHRPLLVIPSRNLRDHDELVLPVG 393
APT +P +P R L ++L LPVG
Sbjct 392 ---APTSQPASDLPVRVLSGPEDLQLPVG 417
>gi|296138073|ref|YP_003645316.1| hypothetical protein Tpau_0334 [Tsukamurella paurometabola DSM
20162]
gi|296026207|gb|ADG76977.1| hypothetical protein Tpau_0334 [Tsukamurella paurometabola DSM
20162]
Length=717
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 96/358 (27%), Positives = 154/358 (44%), Gaps = 37/358 (10%)
Query 46 WVGVGVAAVVTLLSVVSYHGITV---ISGLATWVRDWSADPGTTLGAGCTPAIDHQRRFG 102
W + + L++ VS HG + I+ A ++R A G P R
Sbjct 57 WAVTAIPVIGALVAFVSVHGSVLSERIAARAHYLRRRRA------GYDGLPG----RVID 106
Query 103 RDTVGVREYNG-RLVSVIEVTCGESGPSGRHWHRKSPVPMLPVVAVADGLRQFDIHLDGI 161
D GVR +G LVS IE+T + R R +P+ +A + Q+ +++D I
Sbjct 107 VDGCGVRWGDGYELVSAIELTADLAETRLRD-GRAYAADTVPLDLLASMMTQYGLNVD-I 164
Query 162 DIVSVLVRGGVDAAKASASLQEWEPQGWKSEERAGDRTVADRRRTWLVLRMNPQRNVAAV 221
D+ S R + + QG + +R+ TWL+LR+N +RN+A +
Sbjct 165 DVSSAGRR-----VPPGPAYRASYAQGVRFYSAMAERS------TWLILRVNTRRNLAGI 213
Query 222 A----CRDSLASTLVAATERLVQDLDGQSCAARPVTADELTEVDSAVLADLEPTWSRPGW 277
R + + L+AAT RL Q L + AR + EL ++DS + + W
Sbjct 214 VRRGPSRTAGPTALMAATRRLEQRLHERRIRARILPPAELAQLDSLLSFGADARRGEEQW 273
Query 278 RHLKHFNGYATSFWVTPSDITSETLDELCLPDSPEVGTTVVTVRLTTRVGSP--ALSAWV 335
H+ + N YAT+++V P +++E LD D+ +T V +RL R +S V
Sbjct 274 NHVSYGNSYATTYFVDPGRMSTEKLDRWWGLDT---DSTAVVLRLRKRSAQAPVEISGLV 330
Query 336 RYHSDTRLPKEVAAGLNRLTGRQLAAVRASLPAPTHRPLLVIPSRNLRDHDELVLPVG 393
RY + T L + GRQ A+LP + +PS L + +PVG
Sbjct 331 RYDTATPQIDNHDDSLILVAGRQRELALATLPGGATS-VADLPSAPLTKLAAVEIPVG 387
>gi|229489345|ref|ZP_04383208.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
gi|229323442|gb|EEN89200.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
Length=546
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 82/273 (31%), Positives = 117/273 (43%), Gaps = 26/273 (9%)
Query 104 DTVGVREYNGRLVSVIEVTCGESGPS--GRHWHRKSPVPMLPVVAVADGLRQFDIHLDGI 161
++G+R LV+V+E+ + GRH S +LP A+A+ L Q DI L GI
Sbjct 94 QSIGLRVDGSSLVAVVEIAPPRDYLTRIGRHSFDASH--LLPTAALANCLYQHDISLTGI 151
Query 162 DIVSVLVRGGVDAAKASASLQEWEPQGWKSEERAGDRTVADRRRTWLVLRMNPQRNVAAV 221
DIVS G AA + + + + E G R WL LR + AAV
Sbjct 152 DIVS----HGYRAASGTPATEVY-------ERLIGPLPATATRSVWLALRFDALEGGAAV 200
Query 222 ACR----DSLASTLVAATERLVQDLDGQSCAARPVTADELTEVDSAVLADLEPTWSRPGW 277
R + A R+++ LD C AR +TA E+ + V + W
Sbjct 201 ERRGGGEQGAGRAIAVAANRVIRVLDSAGCKARILTAPEIASSTAQVTRGVAGHEVTETW 260
Query 278 RHLKHFNGYATSFWVTPSDITSETLDELCLPDSPEVGTTV-VTVRLTTRVGSPALSAWVR 336
R F + P IT+ TL + + VGT+V + +R T + G +SA R
Sbjct 261 RSTPLPGVSNVGFGIEPRFITTATLTRVWAVAT--VGTSVTIRLRPTGQRGEAKVSATCR 318
Query 337 YHSDTRLPKEVA--AGLNRLTGRQLAAVRASLP 367
+ TR P E A AGL L GRQ + +LP
Sbjct 319 F--TTRNPPENAPLAGLVSLRGRQRDGLLTNLP 349
>gi|226305376|ref|YP_002765334.1| hypothetical protein RER_18870 [Rhodococcus erythropolis PR4]
gi|226184491|dbj|BAH32595.1| hypothetical protein RER_18870 [Rhodococcus erythropolis PR4]
Length=546
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 76/271 (29%), Positives = 112/271 (42%), Gaps = 22/271 (8%)
Query 104 DTVGVREYNGRLVSVIEVTCGESGPS--GRHWHRKSPVPMLPVVAVADGLRQFDIHLDGI 161
++G+R LV+V+E+ + GRH S +LP A+ + L Q DI L GI
Sbjct 94 QSIGLRVDGSSLVAVVEIAPPRDYLTRIGRHSFDASH--LLPTAALVNCLYQHDISLTGI 151
Query 162 DIVSVLVRGGVDAAKASASLQEWEPQGWKSEERAGDRTVADRRRTWLVLRMNPQRNVAAV 221
DIVS G AA + + + + E G R WL LR + AAV
Sbjct 152 DIVS----HGYRAASGTPATEVY-------ERLIGPLPATATRSVWLALRFDALEGRAAV 200
Query 222 ACR----DSLASTLVAATERLVQDLDGQSCAARPVTADELTEVDSAVLADLEPTWSRPGW 277
R + A R+++ LD C AR +TA E+ + V + W
Sbjct 201 ERRGGGEQGAGRAIAVAANRVIRVLDSAGCKARILTAPEIASSTAQVARGVASHEVTETW 260
Query 278 RHLKHFNGYATSFWVTPSDITSETLDELCLPDSPEVGTTV-VTVRLTTRVGSPALSAWVR 336
R + + P IT+ TL + + VGT+V + +R T G +SA R
Sbjct 261 RSTPLPGVSNVGYGIEPRFITTSTLTRVWAVAT--VGTSVTIRLRPTGERGEAKVSATCR 318
Query 337 YHSDTRLPKEVAAGLNRLTGRQLAAVRASLP 367
+ + R AGL L GRQ + +LP
Sbjct 319 FTTRNRPENAPLAGLVSLRGRQRDGLLTNLP 349
>gi|119855167|ref|YP_935772.1| hypothetical protein Mkms_5782 [Mycobacterium sp. KMS]
gi|119697885|gb|ABL94957.1| hypothetical protein Mkms_5782 [Mycobacterium sp. KMS]
Length=568
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 107/395 (28%), Positives = 159/395 (41%), Gaps = 71/395 (17%)
Query 45 WWVGVGVAAVVTLLSVVSYHGITVISGLATWVRDWSADPGTTLGAGCTPAIDHQRRFGRD 104
WW + AV LL V + H V LA R + G A + H G
Sbjct 36 WWPAAVITAVALLLLVPTVHRRNVPGWLAAVRRWRRSRRGKYPAAAAAVDVPH----GNI 91
Query 105 TVGVREYNGRLVSVIEVTCGESGPSGRHWHRKSPVPM----LPVVAVADGLRQ-FDIHLD 159
GVR +++IEVT P + R S V + LP+ + + L Q I L
Sbjct 92 VCGVRVEAYEALTMIEVT---GKPYSLTFLRGSTVSLTRNVLPLEVLTELLDQPGGIQLA 148
Query 160 GIDIVSV--LVRGGVDAAKASASLQEWEPQGWKSEERAGDRTVADRRRTWLVLRMNPQRN 217
ID+V VR G + ++L DR A +R V+R++ + +
Sbjct 149 AIDVVPAGHRVRRGNEYPPLYSTL-------------LADRPAAGQRTMQFVVRLDIRNS 195
Query 218 VAAVACRDSLASTLVAATERLVQDLDGQSCAARPVTADELTEVDSAVLADLEPTWSRP-- 275
V + R S+ + AATER++ L + A +TA EL + A L+P P
Sbjct 196 VPGLQYRQSVGAAAAAATERIINALLERDIRATALTAAELDTALDRLGARLQPAPVPPVI 255
Query 276 ----------------------------GWRHLKHFNGYATSFWVTPSDITSETLDELCL 307
GWR +K G+ T+++ +P DIT+ +L ++
Sbjct 256 EGTDSPADPVPFRSTSPAQRRSKVSNEVGWRTIKGHPGFLTTYYFSPEDITTASLHQMWA 315
Query 308 PDSPEVGTTVVTVRLTTRV--------GSPALSAWVRYHSDTRLPKEVAAGLNRLTGRQL 359
S EV V+T+ L R G ++A VR + + LN L G Q
Sbjct 316 LRSDEV---VLTLSLFKRRYVEAPDGDGPVMIAATVRTNDPQPPQQPPTLYLNTLPGDQF 372
Query 360 AAVRASLPAPTHRP-LLVIPSRNLRDHDELVLPVG 393
+A A PAPT RP L IP+R L + L +P+G
Sbjct 373 SA--ALRPAPTARPGHLDIPARPLGEPSALEIPIG 405
>gi|226365628|ref|YP_002783411.1| hypothetical protein ROP_62190 [Rhodococcus opacus B4]
gi|226244118|dbj|BAH54466.1| hypothetical membrane protein [Rhodococcus opacus B4]
Length=549
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 99/370 (27%), Positives = 156/370 (43%), Gaps = 34/370 (9%)
Query 4 QRSFGLALSWPRVTAVFLVDVLILAVASHCPDSWQADHHVAWWVGVGVAAVVTLLSVVSY 63
+R L S V L+ V VAS C + WW +A V+ + ++V
Sbjct 8 RRPSSLRFSATEVIIAQLLGVTGGVVASLC--------GLVWWGAATLALVLVVGALVRV 59
Query 64 HGITVISGLATWVRDWSADPGTTLGAGCTPAIDHQRRFGRDTVGVREYNGRLVSVIEVTC 123
G + + T+ R + +PG T + + Q G+ +VG+R G +V+V+EV
Sbjct 60 GGWSSLDWARTYWR-YCTEPGRTE----SRTVGFQAPTGQ-SVGLRWDGGNVVAVVEVLP 113
Query 124 GESGPSGRHWHRKSPVPMLPVVAVADGLRQFDIHLDGIDIVSVLVRGGVDAAKASASLQE 183
+ LP A+A L Q DI L GIDIVS G AA + +
Sbjct 114 PAGSLTQITRDGFQTTHELPTDALAACLVQHDISLTGIDIVS----HGYRAAAGTPATDV 169
Query 184 WEPQGWKSEERAGDRTVADRRRTWLVLRMNPQRNVAAVACR----DSLASTLVAATERLV 239
+ + G R WL LR + +VAAVA R D + + A R+V
Sbjct 170 Y-------DRLVGPLPATATRMVWLALRFDATESVAAVARRGGGEDGASRAITIAAGRVV 222
Query 240 QDLDGQSCAARPVTADELTEVDSAVLADLEPTWSRPGWRHLKHFNGYATSFWVTPSDITS 299
+ L C AR +TA E+ + ++P W+ T + V P +T
Sbjct 223 RALADSGCRARILTAPEIESAALQISRGVDPKTFTQTWKQAPLPGVCNTGYGVDPRYLTR 282
Query 300 ETLDELCLPDSPEVGTTV-VTVRLTTRVGSPALSAWVRYHSDTRLPKEVA-AGLNRLTGR 357
+ L +L +P S +GTTV + +R + G + A R + T +P+ +A GL + GR
Sbjct 283 DLLAKLWVPSS--LGTTVTIRLRPSGYDGQVKIGAACRVTTRT-MPEPLAIPGLVSMQGR 339
Query 358 QLAAVRASLP 367
+ ++LP
Sbjct 340 HRDGLLSNLP 349
>gi|111023128|ref|YP_706100.1| hypothetical protein RHA1_ro06165 [Rhodococcus jostii RHA1]
gi|110822658|gb|ABG97942.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=649
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/231 (29%), Positives = 100/231 (44%), Gaps = 18/231 (7%)
Query 142 LPVVAVADGLRQFDIHLDGIDIVSVLVRGGVDAAKASASLQEWEPQGWKSEERAGDRTVA 201
LP A+A L Q DI L GIDI S G AA S + ++ G
Sbjct 34 LPTDALAARLVQHDISLSGIDIASQ----GYRAAAGSPTTDVYD-------RLIGPLPAT 82
Query 202 DRRRTWLVLRMNPQRNVAAVACR----DSLASTLVAATERLVQDLDGQSCAARPVTADEL 257
+ R WL LR + ++VAAVA R + + + A R+V+ L C AR +TA E+
Sbjct 83 ETRMVWLALRFDATQSVAAVARRGGGEEGASRAITIAASRVVRALADSGCRARILTAPEI 142
Query 258 TEVDSAVLADLEPTWSRPGWRHLKHFNGYATSFWVTPSDITSETLDELCLPDSPEVGTTV 317
+ ++P W+H T + V P +T + L +L +P S +GTTV
Sbjct 143 ESAALQISRGVDPKTFTETWKHAPLPGVCNTGYGVDPRYLTRDLLAKLWVPSS--LGTTV 200
Query 318 -VTVRLTTRVGSPALSAWVRYHSDTRLPKEVAAGLNRLTGRQLAAVRASLP 367
+ +R + G + A R + T GL + GR + ++LP
Sbjct 201 TIRLRPSAHHGQVKVGAACRVTTRTMPEPLTIPGLVSMQGRHRNGLLSNLP 251
>gi|296393780|ref|YP_003658664.1| hypothetical protein Srot_1369 [Segniliparus rotundus DSM 44985]
gi|296180927|gb|ADG97833.1| hypothetical protein Srot_1369 [Segniliparus rotundus DSM 44985]
Length=733
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 87/349 (25%), Positives = 139/349 (40%), Gaps = 53/349 (15%)
Query 46 WVGVGVAAVVTLLSVVSYHG---ITVISGLATWVRDWSADPGTTLGAGCTPAIDHQRRFG 102
W + V AV+ LL ++ G T I L +++ A P LG P G
Sbjct 89 WAVIAVPAVLGLLLILRVRGKSLTTRIGTLTSYLWRKMAKPNKKLGPDHIPHAFDVSGEG 148
Query 103 RDTVGVREYNGRLVSVIEVTCGESGPSGRHWHRKSPVP-------MLPVVAVADGLRQF- 154
G R + L+SV+ +T R + + P ++ + +A L Q+
Sbjct 149 GALFGFRWDDDLLISVLHITP-------RPYEATTLTPRDIQTDDIVSLDTLAASLNQYK 201
Query 155 DIHLDGIDIVSVLVRGGVDAAKASASLQEWEPQGWKSEERAGDRTVADRRRTWLVLRMNP 214
DI LDGID++S R +A P E G R W+VLR+NP
Sbjct 202 DIVLDGIDVISHGWRAPNNA-----------PYTQVYESILGKLPAIAYRSVWVVLRLNP 250
Query 215 QRNVAAVACR----DSLASTLVAATERLVQDLDGQSCAARPVTADELTEV-----DSAVL 265
A+ R + + T+++AT R+ L ++A ++ +
Sbjct 251 LHCTEAIEKRGGGPEGVLKTMMSATSRVAHRLRESGQRVNILSAAQMNTAIGRLSEGLRF 310
Query 266 ADLEPTWSRPGWRHLKHFNGYATSFWVTPSDITSETLDEL-CLPDSPEVGTTVVTVRLTT 324
D+ +W +HF T+F ++P+ + L +L +P + T VT+RL
Sbjct 311 DDMTESWKEIQGGQYRHF----TTFQISPAAFSRAGLTQLWTVPSN----LTTVTLRLRP 362
Query 325 RVGSP------ALSAWVRYHSDTRLPKEVAAGLNRLTGRQLAAVRASLP 367
G+ LS +VRY + L L+RL+G QL ASLP
Sbjct 363 VGGNIDVRDYVQLSGFVRYLTPKELTSPPLPTLSRLSGEQLKGFLASLP 411
>gi|169630839|ref|YP_001704488.1| hypothetical protein MAB_3760 [Mycobacterium abscessus ATCC 19977]
gi|169242806|emb|CAM63834.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=544
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 75/280 (27%), Positives = 118/280 (43%), Gaps = 36/280 (12%)
Query 102 GRDT-VGVREYNGRLVSVIEVTCGESGPSGRHWHRKSPVPMLPVVAVADGLRQFDIHLDG 160
G+D+ G R NG+L++V+E++ + PS + ++P+ + + + Q DI L+
Sbjct 93 GQDSWTGTRWENGKLITVLEISATQRHPSVITPDHCATDSLVPLRVLRECMHQNDIELES 152
Query 161 IDIVS--------VLVRGGVDAAKASASLQEWEPQGWKSEERAGDRTVADRRRTWLVLRM 212
ID++S ++RGG D G R W+VLR
Sbjct 153 IDVISNGQRTAQGTVLRGGYD-------------------RLVGPLPAVAIRTVWVVLRF 193
Query 213 NPQRNVAAVACRDSLASTL----VAATERLVQDLDGQSCAARPVTADELTEVDSAVLADL 268
+P NV AV R V AT R+ + L CA+ + A ++ + + +L
Sbjct 194 DPGANVDAVFRRGGGRRGAERCAVIATARVRRALAAAHCASTILQAGQIHRISAEMLRQY 253
Query 269 EPTWSRPGWRHLKHFNGYATSFWVTPSDITSETLDELCLPDSPEVGTTVVTVRLTTRV-G 327
W L + Y + + P IT TL L + E T VTVRL G
Sbjct 254 AGAPMHEDWSGLTLIDSYNVAMGIDPWYITDATLTGLWARPTLE---TSVTVRLRPAAKG 310
Query 328 SPALSAWVRYHSDTRLPKEVAAGLNRLTGRQLAAVRASLP 367
++ A VR+ +D +LP + G+ L G Q A A LP
Sbjct 311 RTSVGALVRWATDEQLPVRHSTGMTSLNGSQRDAFFAGLP 350
>gi|54022791|ref|YP_117033.1| hypothetical protein nfa8240 [Nocardia farcinica IFM 10152]
gi|54014299|dbj|BAD55669.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=592
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 78/282 (28%), Positives = 114/282 (41%), Gaps = 37/282 (13%)
Query 105 TVGVREYNGRLVSVIEVTCGESGPSGRHWHRKSPVP---MLPVVAVADGLRQFDIHLDGI 161
+ GVR NG L++++ + + P R+ + +LP+ + L QFDI L I
Sbjct 125 SYGVRWDNGLLITMMRI---DPPPDALTLLRRGSLSTDQVLPLTEIGRCLSQFDIQLASI 181
Query 162 DIVSVLVRGGVDAAKASASLQEWEPQGWKSEERAGDRTVADRRRTWLVLRMNPQRNVAAV 221
D++S R + A + G R WLVLR++P NV AV
Sbjct 182 DVISTGARTASNGIVARL-----------YDSIIGPLPAIAHRTVWLVLRLDPLANVRAV 230
Query 222 ACRDSLAS----TLVAATERLVQDLDGQSCAARPVTADELTEVDSAVL--ADLEPTWSRP 275
R A+ T + AT R+ L + +TA E+ + LE P
Sbjct 231 DNRGGGATGTLRTAIIATRRVANRLAALDISTSVLTASEMNAAVRVLTRGVALEDFAETP 290
Query 276 GWRHLKHFNGYATSFWVTPSDITSETLDELCLPDSPEVGTTVVTVRL---TTRVGSP--- 329
L H + TS+ + P I S ++ +P + TT VTVRL R P
Sbjct 291 --HSLVHDGVHLTSYEIGPELIGSRGFADIWA--TPSMSTT-VTVRLRPGEQRSAQPEDS 345
Query 330 ---ALSAWVRYHSDTRLPKEVAAGLNRLTGRQLAAVRASLPA 368
L A VR+ ++ AGL L GRQ A+ LPA
Sbjct 346 PPITLGALVRFDTEAEPTAPPVAGLRPLPGRQFRALLDCLPA 387
>gi|54022813|ref|YP_117055.1| hypothetical protein nfa8460 [Nocardia farcinica IFM 10152]
gi|54014321|dbj|BAD55691.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=548
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/268 (27%), Positives = 110/268 (42%), Gaps = 36/268 (13%)
Query 114 RLVSVIEVTCGESGPSGRHWHRKSPVPMLPVVAVADGLRQFDIHLDGIDIVSVLVRGGVD 173
R+V+V+EV G + +LP+ +A L Q DI L GIDI+S R
Sbjct 105 RVVTVVEVLPPRGGLTRISSSTVLASHLLPLPELAKCLNQHDILLSGIDIISHGHRS--- 161
Query 174 AAKASASLQEWEPQGWKSEERAGDRTVADRRRTWLVLRMNPQRNVAAVAC---------- 223
+ P G E G R WL + + AVAC
Sbjct 162 --------RAGTPAGKIYETLLGPLPATAHRSVWLAISFD------AVACPGAAERRGGG 207
Query 224 RDSLASTLVAATERLVQDLDGQSCAARPVTADELTEVDSAVLADLEPTWSRPGWRHLKHF 283
+ + + AT+R+++ L+ C AR +TA E+ + + A +P WR+ +
Sbjct 208 TEGASRAVTIATQRIMRALEDADCNARILTAPEIRKAVLQITAGYDPRALTHRWRYAELG 267
Query 284 NGYATSFWVTPSDITSETLDELCLPDSPEVGTTVVTVRLTTRVGSPA----LSAWVRYHS 339
N V P + S+ L +L + +P GTT VTVRL R GS A + A R +
Sbjct 268 NAVNIGSAVDPDHLGSDLLAQLWV--APSRGTT-VTVRL--RPGSSAETVNIGASWRLTA 322
Query 340 DTRLPKEVAAGLNRLTGRQLAAVRASLP 367
+ G+ + GR + A+LP
Sbjct 323 RELPERAKQTGMISMNGRHREGLLANLP 350
>gi|317506952|ref|ZP_07964721.1| hypothetical protein HMPREF9336_01092 [Segniliparus rugosus ATCC
BAA-974]
gi|316254710|gb|EFV14011.1| hypothetical protein HMPREF9336_01092 [Segniliparus rugosus ATCC
BAA-974]
Length=636
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 93/380 (25%), Positives = 145/380 (39%), Gaps = 62/380 (16%)
Query 39 ADHHVAWWVGVGVAAVVTLLSVVSYHGITV---ISGLATWVRDWSADPGTTLGAGCTPAI 95
A H W + V +V+ LL ++ G ++ I ++ P LG P
Sbjct 68 AKLHAPLWAAIAVPSVLALLLILRIRGKSLTVRIGTFCAYLWRKMVKPSKKLGPEHIPNA 127
Query 96 DHQRRFGRDTVGVREYNGRLVSVIEVTCGESGPSGRHWHRKSPVP-------MLPVVAVA 148
G G R + L+SV+ VT R + + P ++ + +A
Sbjct 128 FDVSGEGGALFGFRWDDDLLISVLHVTP-------RPYEATTLTPRDIQTDDIVSLDTLA 180
Query 149 DGLRQF-DIHLDGIDIVSVLVRGGVDAAKASASLQEWEPQGWKSEERAGDRTVADRRRTW 207
L Q+ DI LDGID++S R +A P E G R W
Sbjct 181 ASLNQYKDIVLDGIDVISHGWRAPNNA-----------PYTQVYESILGKLPAIAYRSVW 229
Query 208 LVLRMNPQRNVAAVACR----DSLASTLVAATERLVQDLDGQSCAARPVTADELTEV--- 260
+VLR+NP A+ R + + T+++AT R+ L + A ++
Sbjct 230 VVLRLNPLNCPEAIEKRGGGPEGVLKTMISATSRVAHRLRESGQRVHILNAAQMNTAIGR 289
Query 261 --DSAVLADLEPTWSRPGWRHLKHFNGYATSFWVTPSDITSETLDEL-CLPDSPEVGTTV 317
+ D+ +W +HF T+F ++PS + L +L +P + T
Sbjct 290 LSEGLRFDDMTESWKEIKGGQYRHF----TTFQISPSAFSRAGLTQLWTVPSN----LTT 341
Query 318 VTVRL------TTRVGSPALSAWVRYHSDTRLPKEVAAGLNRLTGRQLAAVRASLP---- 367
VT+RL T +S +VRY + L L RL+G QL ASLP
Sbjct 342 VTLRLRPVDAHTDVRDYVQISGFVRYLTPKELSAPPLPTLARLSGEQLKGFLASLPFGAR 401
Query 368 ---APTHRPLLVIPSRNLRD 384
AP P + S+ LRD
Sbjct 402 SLEAPA--PGITAASKRLRD 419
>gi|289441324|ref|ZP_06431068.1| conserved membrane protein [Mycobacterium tuberculosis T46]
gi|289572141|ref|ZP_06452368.1| conserved membrane protein [Mycobacterium tuberculosis T17]
gi|289414243|gb|EFD11483.1| conserved membrane protein [Mycobacterium tuberculosis T46]
gi|289545896|gb|EFD49543.1| conserved membrane protein [Mycobacterium tuberculosis T17]
Length=462
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 69/265 (27%), Positives = 102/265 (39%), Gaps = 52/265 (19%)
Query 45 WWVGVGVAAVVTLLSVVSYHGITVISGLATWVRDWSADPGTTLGAGCTPAIDHQRRFGRD 104
WW G+ +A++ +++ V+++G + G+A V W + P + + G D
Sbjct 34 WWAGIALASLGVIVATVTFYGRRITGGVAA-VYAWLRRRRRPPDSSSEPVVGATVKPG-D 91
Query 105 TVGVREYNGRLVSVIEVTCGESGPSGRHWHRKSPVPMLPVVAVADGLRQFDIHLD-GI-- 161
V VR LV+VIE+ P P P V V DG D LD G+
Sbjct 92 HVAVRWQGEFLVAVIELI---------------PRPFTPTVIV-DGQAHTDDMLDTGLVE 135
Query 162 ------------DIVSVLVRGGVDAAKASASLQEWEPQGWKSEERAGDRTVADRRRTWLV 209
DIVS R G AA SL ++ G RRTW+V
Sbjct 136 ELLSVHCPDLEADIVSAGYRVGNTAAPDVVSLY---------QQVIGTDPAPANRRTWIV 186
Query 210 LRMNPQRNVAAVACRDS----LASTLVAATERLVQDLDGQSCAARPVTADELTEVDSAVL 265
LR +P+R + RD LA LVA+ R+ L A V + D A
Sbjct 187 LRADPERTRKSAQRRDEGVAGLARYLVASATRIADRLASHGVDA--VCGRSFDDYDHAT- 243
Query 266 ADLEPTWSRPGWRHLKHFNGYATSF 290
+ + R W +K + Y ++
Sbjct 244 ---DIGFVREKWSMIKGRDAYTAAY 265
>gi|126432680|ref|YP_001068371.1| hypothetical protein Mjls_0067 [Mycobacterium sp. JLS]
gi|126232480|gb|ABN95880.1| putative conserved membrane protein [Mycobacterium sp. JLS]
Length=465
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 69/258 (27%), Positives = 105/258 (41%), Gaps = 40/258 (15%)
Query 46 WVGVGVAAVVTLLSVVSYHGITV---ISGLATWVRDWSADPGTTLGAGCTPAIDHQRRFG 102
WVGV V+ ++ L++VV+ G + ++ L +W R + P A PA+ G
Sbjct 38 WVGVTVSVLIALIAVVTVRGRRLTGWVAALFSWRRRHLSTPP----APSEPAVGSTVMPG 93
Query 103 RDTVGVREYNGRLVSVIEVTCGESGPSGRHWHRKSPVPMLPVVAVADGLRQFDIHLDGID 162
D V VR L+S IE+ P P P V V +G D LD
Sbjct 94 -DHVAVRWQGDHLMSAIELV---------------PRPFTPTVVV-NGQSFTDDVLDTAM 136
Query 163 IVSVLV----RGGVDAAKASASLQEWEPQGWKS--EERAGDRTVADRRRTWLVLRMNPQR 216
+ +++ D A + + P + E+ G RRTW+VLR +P+
Sbjct 137 VENLIAAHCPELEADVVAAGYRVGKTAPASLVALYEQVVGPYPAPANRRTWIVLRADPEL 196
Query 217 NVAAVACRDS----LASTLVAATERLVQDLDGQSCAARPVTADELTEVDSAVLADLEPTW 272
RDS LA LVA+T RL L G ARP + + D A E ++
Sbjct 197 TRKPAQRRDSGVAGLARYLVASTTRLADQLAGNGIDARP--SRSFDDFDRAT----EVSF 250
Query 273 SRPGWRHLKHFNGYATSF 290
R W +K + + ++
Sbjct 251 ERETWSAIKGRSTFTAAY 268
>gi|108797058|ref|YP_637255.1| hypothetical protein Mmcs_0077 [Mycobacterium sp. MCS]
gi|119866143|ref|YP_936095.1| hypothetical protein Mkms_0086 [Mycobacterium sp. KMS]
gi|108767477|gb|ABG06199.1| putative conserved membrane protein [Mycobacterium sp. MCS]
gi|119692232|gb|ABL89305.1| putative conserved membrane protein [Mycobacterium sp. KMS]
Length=465
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 72/267 (27%), Positives = 105/267 (40%), Gaps = 58/267 (21%)
Query 46 WVGVGVAAVVTLLSVVSYHGITV---ISGLATWVRDWSADPGTTLGAGCTPAIDHQRRFG 102
WVGV V+ ++ L++VV+ G + ++ L +W R + P A PA+ G
Sbjct 38 WVGVTVSVLIALIAVVTVRGRRLTGWVAALFSWRRRHLSTPP----APSEPAVGSTVMPG 93
Query 103 RDTVGVREYNGRLVSVIEVTCGESGPSGRHWHRKSPVPMLPVVAVADGLRQFDIHLDGI- 161
D V VR L+S IE+ P P P V V +G D LD
Sbjct 94 -DHVAVRWQGDHLMSAIELV---------------PRPFTPTVVV-NGQSFTDDVLDTAL 136
Query 162 --------------DIVSVLVRGGVDAAKASASLQEWEPQGWKSEERAGDRTVADRRRTW 207
D+V+ R G A + +L E + G RRTW
Sbjct 137 VENLIAAHCPELEADVVAAGYRVGKTAPASLVALYE---------QVVGPYPAPANRRTW 187
Query 208 LVLRMNPQRNVAAVACRDS----LASTLVAATERLVQDLDGQSCAARPVTADELTEVDSA 263
+VLR +P+ RDS LA LVA+T RL L G ARP + + D A
Sbjct 188 IVLRADPELTRKPAQRRDSGVAGLARYLVASTTRLADQLAGNGIDARP--SRSFDDFDRA 245
Query 264 VLADLEPTWSRPGWRHLKHFNGYATSF 290
E ++ R W +K + + ++
Sbjct 246 T----EVSFERETWSAIKGRSTFTAAY 268
>gi|145226048|ref|YP_001136702.1| hypothetical protein Mflv_5453 [Mycobacterium gilvum PYR-GCK]
gi|145218511|gb|ABP47914.1| hypothetical protein Mflv_5453 [Mycobacterium gilvum PYR-GCK]
Length=702
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 67/266 (26%), Positives = 110/266 (42%), Gaps = 36/266 (13%)
Query 106 VGVREYNGRLVSVIEVTCGESGPSGRHWHRKSPVPMLPVVAVADGLRQFDIHLDGIDIVS 165
+GV N L ++E+ PS + + + + + + + D+ LD ID++
Sbjct 109 IGVVSENETLTMMVELRPDPIAPSVVTDTEERTINTISIAMLTEMMNVLDVELDSIDLLG 168
Query 166 VLVRGGVDAAKASASLQEWEPQGWKSEERAGDRTVADRRRTWLVLRMNPQRNVAAV--AC 223
D +A + ++ G A R W+VLRM N+AA+
Sbjct 169 -------DGFRAVGGFSDLY------QQMTGPTPAAAARSNWIVLRMRLYENLAAIDRRG 215
Query 224 RDSLASTLVAATE--RLVQDLDGQSCAARPVTADELTEVDSAVLADLEPTWSRPGWRHLK 281
RD ++ VAAT R L + A P +A ++ V++A L D PT W H++
Sbjct 216 RDIESAHRVAATTCLRAADMLAAKGIDAVPASAAQIDAVNAA-LHDDTPTVDH--WSHME 272
Query 282 HFNGYATSFWVTPSDITSETLDELCLPDSPEVGTTVVTVRLTT-----RVGSPA--LSAW 334
GYA+ ++ P+ I+ DSP+ T + R +T R G ++A
Sbjct 273 SRQGYASVYYADPAHISV---------DSPQWWTWTLAQRTSTLIRLSRAGGDTVNIAAL 323
Query 335 VRYHSDTRLPKEVAAGLNRLTGRQLA 360
VRY + R + L L G Q A
Sbjct 324 VRYRTAARPTAPPVSRLGPLYGVQPA 349
>gi|240168362|ref|ZP_04747021.1| hypothetical protein MkanA1_03557 [Mycobacterium kansasii ATCC
12478]
Length=465
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 70/276 (26%), Positives = 102/276 (37%), Gaps = 66/276 (23%)
Query 41 HHVAWWVGVGVAAVVTLLSVVSYHGITVISGLAT---WVRDWSADPGT----TLGAGCTP 93
H WW G+ + AV T+++ V++ G V +AT W+R P +GA P
Sbjct 33 HTRYWWAGIAIVAVATIVATVTFFGRRVTGWVATMFVWLRRRRKPPDVPSEPVVGATVKP 92
Query 94 AIDHQRRFGRDTVGVREYNGRLVSVIEVTCGESGPSGRHWHRKSPVPMLPVVAVADGLRQ 153
D V VR L++VIE+ P P P V V DG
Sbjct 93 G---------DHVAVRWRRECLIAVIEL---------------KPRPFTPTVIV-DGQAH 127
Query 154 FDIHLDG---------------IDIVSVLVRGGVDAAKASASLQEWEPQGWKSEERAGDR 198
D LD D+VS R G A+ +L + G
Sbjct 128 TDDVLDTRLLEELLAVHCPDLEADVVSAGYRVGNTASPDVVNLYQ---------RVIGAD 178
Query 199 TVADRRRTWLVLRMNPQRNVAAVACRDS----LASTLVAATERLVQDLDGQSCAARPVTA 254
RRTW++LR NP+R + RD+ LA LVA+ R+ L A V
Sbjct 179 PAPANRRTWIMLRANPERTHKSAQRRDAGVAGLARYLVASATRIADSLASNGVDA--VCG 236
Query 255 DELTEVDSAVLADLEPTWSRPGWRHLKHFNGYATSF 290
+ D A+ + + R W +K + Y ++
Sbjct 237 RSFDDYDHAI----DIGFVREKWSMIKGRDAYTAAY 268
>gi|145221351|ref|YP_001132029.1| hypothetical protein Mflv_0756 [Mycobacterium gilvum PYR-GCK]
gi|145213837|gb|ABP43241.1| putative conserved membrane protein [Mycobacterium gilvum PYR-GCK]
Length=465
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 71/266 (27%), Positives = 104/266 (40%), Gaps = 56/266 (21%)
Query 46 WVGVGVAAVVTLLSVVSYHGITV---ISGLATWVRDWSADPGTTLGAGCTPAIDHQRRFG 102
W+G+ +A ++ L ++V+ G + I+ L W R P A PA+ G
Sbjct 38 WLGITLAVLIALCALVTIRGRRITGWIAALFAWRRRHRQPPP----APSEPAVGATVVPG 93
Query 103 RDTVGVREYNGRLVSVIEVTCGESGPSGRHWHRKSPVPMLPVV-----AVADGL---RQF 154
D V +R +G LVS IE+ P P P V A D + RQ
Sbjct 94 -DHVALRWQHGYLVSAIELI---------------PRPFTPTVIVNGEAFTDDVIDSRQL 137
Query 155 DIHLDGI------DIVSVLVRGGVDAAKASASLQEWEPQGWKSEERAGDRTVADRRRTWL 208
+ L DIVS R G A A L E + G RRRTW+
Sbjct 138 EKLLAAYCPDLEADIVSAGYRVGRTAPAALVGLYE---------QVVGPYPAPARRRTWI 188
Query 209 VLRMNPQRNVAAVACRD----SLASTLVAATERLVQDLDGQSCAARPVTADELTEVDSAV 264
VLR +P + + RD LA +V++T R+ L ARP A + D A
Sbjct 189 VLRADPDKTRKSALRRDVGVSGLAQYVVSSTTRIADHLASNGIDARP--ARSFDDFDGAT 246
Query 265 LADLEPTWSRPGWRHLKHFNGYATSF 290
E ++ R W +K + + ++
Sbjct 247 ----EISFERETWSMVKGRSTFTAAY 268
>gi|315441765|ref|YP_004074644.1| hypothetical protein Mspyr1_00750 [Mycobacterium sp. Spyr1]
gi|315260068|gb|ADT96809.1| hypothetical protein Mspyr1_00750 [Mycobacterium sp. Spyr1]
Length=465
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 71/266 (27%), Positives = 104/266 (40%), Gaps = 56/266 (21%)
Query 46 WVGVGVAAVVTLLSVVSYHGITV---ISGLATWVRDWSADPGTTLGAGCTPAIDHQRRFG 102
W+G+ +A ++ L ++V+ G + I+ L W R P A PA+ G
Sbjct 38 WLGITLAVLIALCALVTIRGRRITGWIAALFAWRRRHRQPPP----APSEPAVGATVVPG 93
Query 103 RDTVGVREYNGRLVSVIEVTCGESGPSGRHWHRKSPVPMLPVV-----AVADGL---RQF 154
D V +R +G LVS IE+ P P P V A D + RQ
Sbjct 94 -DHVALRWQHGYLVSAIELI---------------PRPFTPTVIVNGEAFTDDVIDSRQL 137
Query 155 DIHLDGI------DIVSVLVRGGVDAAKASASLQEWEPQGWKSEERAGDRTVADRRRTWL 208
+ L DIVS R G A A L E + G RRRTW+
Sbjct 138 EKLLAAYCPDLEADIVSAGYRVGRTAPAALVGLYE---------QVVGPYPAPARRRTWI 188
Query 209 VLRMNPQRNVAAVACRD----SLASTLVAATERLVQDLDGQSCAARPVTADELTEVDSAV 264
VLR +P + + RD LA +V++T R+ L ARP A + D A
Sbjct 189 VLRADPDKTRKSALRRDVGVSGLAQYVVSSTTRIADHLASNGIDARP--ARSFDDFDGAT 246
Query 265 LADLEPTWSRPGWRHLKHFNGYATSF 290
E ++ R W +K + + ++
Sbjct 247 ----EISFERETWSMVKGRSTFTAAY 268
>gi|289572535|ref|ZP_06452762.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
gi|339633874|ref|YP_004725516.1| hypothetical protein MAF_38970 [Mycobacterium africanum GM041182]
gi|289536966|gb|EFD41544.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
gi|339333230|emb|CCC28965.1| putative conserved membrane protein [Mycobacterium africanum
GM041182]
Length=462
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/265 (27%), Positives = 101/265 (39%), Gaps = 52/265 (19%)
Query 45 WWVGVGVAAVVTLLSVVSYHGITVISGLATWVRDWSADPGTTLGAGCTPAIDHQRRFGRD 104
WW G+ +A++ +++ V+++G I+G V W + P + + G D
Sbjct 34 WWAGIALASLGVIVATVTFYG-RRITGWVAAVYAWLRRRRRPPDSSSEPVVGATVKPG-D 91
Query 105 TVGVREYNGRLVSVIEVTCGESGPSGRHWHRKSPVPMLPVVAVADGLRQFDIHLD-GI-- 161
V VR LV+VIE+ P P P V V DG D LD G+
Sbjct 92 HVAVRWQGEFLVAVIELI---------------PRPFTPTVIV-DGQAHTDDMLDTGLVE 135
Query 162 ------------DIVSVLVRGGVDAAKASASLQEWEPQGWKSEERAGDRTVADRRRTWLV 209
DIVS R G AA SL + + G RRTW+V
Sbjct 136 ELLSVHCPDLEADIVSAGYRVGNTAAPDVVSLYQ---------QVIGTDPAPANRRTWIV 186
Query 210 LRMNPQRNVAAVACRDS----LASTLVAATERLVQDLDGQSCAARPVTADELTEVDSAVL 265
LR +P+R + RD LA LVA+ R+ L A V + D A
Sbjct 187 LRADPERTRKSAQRRDEGVAGLARYLVASATRIADRLASHGVDA--VCGRSFDDYDHAT- 243
Query 266 ADLEPTWSRPGWRHLKHFNGYATSF 290
+ + R W +K + Y ++
Sbjct 244 ---DIGFVREKWSMIKGRDAYTAAY 265
>gi|253800932|ref|YP_003033934.1| hypothetical protein TBMG_03930 [Mycobacterium tuberculosis KZN
1435]
gi|289556151|ref|ZP_06445361.1| conserved membrane protein [Mycobacterium tuberculosis KZN 605]
gi|297636568|ref|ZP_06954348.1| hypothetical protein MtubK4_20685 [Mycobacterium tuberculosis
KZN 4207]
6 more sequence titles
Length=462
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/265 (27%), Positives = 101/265 (39%), Gaps = 52/265 (19%)
Query 45 WWVGVGVAAVVTLLSVVSYHGITVISGLATWVRDWSADPGTTLGAGCTPAIDHQRRFGRD 104
WW G+ +A++ +++ V+++G I+G V W + P + + G D
Sbjct 34 WWAGIALASLGVIVATVTFYG-RRITGWVAAVYAWLRRRRRPPDSSSEPVVGATVKPG-D 91
Query 105 TVGVREYNGRLVSVIEVTCGESGPSGRHWHRKSPVPMLPVVAVADGLRQFDIHLD-GI-- 161
V VR LV+VIE+ P P P V V DG D LD G+
Sbjct 92 HVAVRWQGEFLVAVIELI---------------PRPFTPTVVV-DGQAHTDDMLDTGLVE 135
Query 162 ------------DIVSVLVRGGVDAAKASASLQEWEPQGWKSEERAGDRTVADRRRTWLV 209
DIVS R G AA SL + + G RRTW+V
Sbjct 136 ELLSVHCPDLEADIVSAGYRVGNTAAPDVVSLYQ---------QVIGTDPAPANRRTWIV 186
Query 210 LRMNPQRNVAAVACRDS----LASTLVAATERLVQDLDGQSCAARPVTADELTEVDSAVL 265
LR +P+R + RD LA LVA+ R+ L A V + D A
Sbjct 187 LRADPERTRKSAQRRDEGVAGLARYLVASATRIADRLASHGVDA--VCGRSFDDYDHAT- 243
Query 266 ADLEPTWSRPGWRHLKHFNGYATSF 290
+ + R W +K + Y ++
Sbjct 244 ---DIGFVREKWSMIKGRDAYTAAY 265
>gi|294995567|ref|ZP_06801258.1| hypothetical protein Mtub2_13937 [Mycobacterium tuberculosis
210]
Length=462
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/265 (27%), Positives = 101/265 (39%), Gaps = 52/265 (19%)
Query 45 WWVGVGVAAVVTLLSVVSYHGITVISGLATWVRDWSADPGTTLGAGCTPAIDHQRRFGRD 104
WW G+ +A++ +++ V+++G I+G V W + P + + G D
Sbjct 34 WWAGIALASLGVIVATVTFYG-RRITGWVAAVYAWLRRRRRPPDSSSEPVVGATVKPG-D 91
Query 105 TVGVREYNGRLVSVIEVTCGESGPSGRHWHRKSPVPMLPVVAVADGLRQFDIHLD-GI-- 161
V VR LV+VIE+ P P P V V DG D LD G+
Sbjct 92 HVAVRWQGEFLVAVIELI---------------PRPFTPTVIV-DGQAHTDDMLDTGLVE 135
Query 162 ------------DIVSVLVRGGVDAAKASASLQEWEPQGWKSEERAGDRTVADRRRTWLV 209
DIVS R G AA SL + + G RRTW+V
Sbjct 136 ELLSVHCPDLEADIVSAGYRVGNTAAPDVVSLYQ---------QVIGTDPAPANRRTWIV 186
Query 210 LRMNPQRNVAAVACRDS----LASTLVAATERLVQDLDGQSCAARPVTADELTEVDSAVL 265
LR +P+R + RD LA LVA+ R+ L A V + D A
Sbjct 187 LRADPERTRKSAQRRDEGVAGLARYLVASATRIADRLASHGVDA--VCGRSFDDYDHAT- 243
Query 266 ADLEPTWSRPGWRHLKHFNGYATSF 290
+ + R W +K + Y ++
Sbjct 244 ---DIGFVREKWSMIKGRDAYTAAY 265
>gi|254366425|ref|ZP_04982469.1| conserved membrane protein [Mycobacterium tuberculosis str. Haarlem]
gi|134151937|gb|EBA43982.1| conserved membrane protein [Mycobacterium tuberculosis str. Haarlem]
Length=462
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/265 (27%), Positives = 101/265 (39%), Gaps = 52/265 (19%)
Query 45 WWVGVGVAAVVTLLSVVSYHGITVISGLATWVRDWSADPGTTLGAGCTPAIDHQRRFGRD 104
WW G+ +A++ +++ V+++G I+G V W + P + + G D
Sbjct 34 WWAGIALASLGVIVATVTFYG-RRITGWVAAVYAWLRRRRRPPDSSSEPVVGATVKPG-D 91
Query 105 TVGVREYNGRLVSVIEVTCGESGPSGRHWHRKSPVPMLPVVAVADGLRQFDIHLD-GI-- 161
V VR LV+VIE+ P P P V V DG D LD G+
Sbjct 92 HVAVRWQGEFLVAVIELI---------------PRPFTPTVIV-DGQAHTDDMLDTGLVE 135
Query 162 ------------DIVSVLVRGGVDAAKASASLQEWEPQGWKSEERAGDRTVADRRRTWLV 209
DIVS R G AA SL + + G RRTW+V
Sbjct 136 ELLSVHCPDLEADIVSAGYRVGNTAAPDVVSLYQ---------QVIGTDPAPANRRTWIV 186
Query 210 LRMNPQRNVAAVACRDS----LASTLVAATERLVQDLDGQSCAARPVTADELTEVDSAVL 265
LR +P+R + RD LA LVA+ R+ L A V + D A
Sbjct 187 LRADPERTRKSAQRRDEGAAGLARYLVASATRIADRLASHGVDA--VCGRSFDDYDHAT- 243
Query 266 ADLEPTWSRPGWRHLKHFNGYATSF 290
+ + R W +K + Y ++
Sbjct 244 ---DIGFVREKWSMIKGRDAYTAAY 265
>gi|15611018|ref|NP_218399.1| hypothetical protein Rv3882c [Mycobacterium tuberculosis H37Rv]
gi|15843514|ref|NP_338551.1| hypothetical protein MT3997 [Mycobacterium tuberculosis CDC1551]
gi|31795056|ref|NP_857549.1| hypothetical protein Mb3912c [Mycobacterium bovis AF2122/97]
56 more sequence titles
Length=462
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/265 (27%), Positives = 101/265 (39%), Gaps = 52/265 (19%)
Query 45 WWVGVGVAAVVTLLSVVSYHGITVISGLATWVRDWSADPGTTLGAGCTPAIDHQRRFGRD 104
WW G+ +A++ +++ V+++G I+G V W + P + + G D
Sbjct 34 WWAGIALASLGVIVATVTFYG-RRITGWVAAVYAWLRRRRRPPDSSSEPVVGATVKPG-D 91
Query 105 TVGVREYNGRLVSVIEVTCGESGPSGRHWHRKSPVPMLPVVAVADGLRQFDIHLD-GI-- 161
V VR LV+VIE+ P P P V V DG D LD G+
Sbjct 92 HVAVRWQGEFLVAVIELI---------------PRPFTPTVIV-DGQAHTDDMLDTGLVE 135
Query 162 ------------DIVSVLVRGGVDAAKASASLQEWEPQGWKSEERAGDRTVADRRRTWLV 209
DIVS R G AA SL + + G RRTW+V
Sbjct 136 ELLSVHCPDLEADIVSAGYRVGNTAAPDVVSLYQ---------QVIGTDPAPANRRTWIV 186
Query 210 LRMNPQRNVAAVACRDS----LASTLVAATERLVQDLDGQSCAARPVTADELTEVDSAVL 265
LR +P+R + RD LA LVA+ R+ L A V + D A
Sbjct 187 LRADPERTRKSAQRRDEGVAGLARYLVASATRIADRLASHGVDA--VCGRSFDDYDHAT- 243
Query 266 ADLEPTWSRPGWRHLKHFNGYATSF 290
+ + R W +K + Y ++
Sbjct 244 ---DIGFVREKWSMIKGRDAYTAAY 265
>gi|118463849|ref|YP_879453.1| hypothetical protein MAV_0159 [Mycobacterium avium 104]
gi|254773216|ref|ZP_05214732.1| hypothetical protein MaviaA2_00841 [Mycobacterium avium subsp.
avium ATCC 25291]
gi|118165136|gb|ABK66033.1| putative conserved membrane protein [Mycobacterium avium 104]
Length=528
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/166 (28%), Positives = 80/166 (49%), Gaps = 15/166 (9%)
Query 141 MLPVVAVADGLRQ-FDIHLDGIDIVSVLVRGGVDAAKASASLQEWEPQGWKSEERAGDRT 199
+L VV +A L Q + LD I +V+V R G ++ ++ P+ + SE G
Sbjct 123 VLDVVELAPMLHQALGLQLDSISVVTVGSRHG--------NVGDY-PRVYDSE--IGTPP 171
Query 200 VADRRRTWLVLRMNPQRNVAAVACRDSLASTLVAATERLVQDLDGQSCAARPVTADELTE 259
A RR TWL++R+ N A+ R ++ + ++ +R+ L Q A+ A +L E
Sbjct 172 YAGRRETWLIMRLAVIDNAQALRWRTTVGAAAISVAQRIAGLLRCQGLRAKVANATDLAE 231
Query 260 VDSAVLAD-LEPTWSRPGWRHLKHFNGYATSFWVTPSDITSETLDE 304
+D + D + T R W+ ++ G+ T++ P ITS L +
Sbjct 232 LDRRLGWDAVSGTVQR--WKAIRGEAGWMTTYAYPPQAITSRNLSQ 275
>gi|336457499|gb|EGO36506.1| type VII secretion protein EccE [Mycobacterium avium subsp. paratuberculosis
S397]
Length=528
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/166 (28%), Positives = 80/166 (49%), Gaps = 15/166 (9%)
Query 141 MLPVVAVADGLRQ-FDIHLDGIDIVSVLVRGGVDAAKASASLQEWEPQGWKSEERAGDRT 199
+L VV +A L Q + LD I +V+V R G ++ ++ P+ + SE G
Sbjct 123 VLDVVELAPMLHQALGLQLDSISVVTVGSRHG--------NVGDY-PRVYDSE--IGTPP 171
Query 200 VADRRRTWLVLRMNPQRNVAAVACRDSLASTLVAATERLVQDLDGQSCAARPVTADELTE 259
A RR TWL++R+ N A+ R ++ + ++ +R+ L Q A+ A +L E
Sbjct 172 YAGRRETWLIMRLAVIDNAQALRWRTTVGAAAISVAQRIAGLLRCQGLRAKVANATDLAE 231
Query 260 VDSAVLAD-LEPTWSRPGWRHLKHFNGYATSFWVTPSDITSETLDE 304
+D + D + T R W+ ++ G+ T++ P ITS L +
Sbjct 232 LDRRLGWDAVSGTVQR--WKAIRGEAGWMTTYAYPPQAITSRNLSQ 275
>gi|120401119|ref|YP_950948.1| hypothetical protein Mvan_0091 [Mycobacterium vanbaalenii PYR-1]
gi|119953937|gb|ABM10942.1| putative conserved membrane protein [Mycobacterium vanbaalenii
PYR-1]
Length=465
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 66/256 (26%), Positives = 103/256 (41%), Gaps = 36/256 (14%)
Query 46 WVGVGVAAVVTLLSVVSYHGITV---ISGLATWVRDWSADPGT----TLGAGCTPAIDHQ 98
W+G+ + ++ L SVV+ G + ++ L W R P T +GA P
Sbjct 38 WLGITLGVLIGLASVVTIRGRRLTGWVAALFAWRRRHRQPPPTPSEPAVGATVIPG---- 93
Query 99 RRFGRDTVGVREYNGRLVSVIEVTCGESGPSGRHWHRKSPVPMLPVVAVADGLRQFDIHL 158
D V +R + LVSVIE+ P+ ++ V D L + L
Sbjct 94 -----DHVALRWQDDYLVSVIELVPRPFTPTVIVNGEAFTDDVVETRLVEDLLTAYCPDL 148
Query 159 DGIDIVSVLVRGGVDAAKASASLQEWEPQGWKSEERAGDRTVADRRRTWLVLRMNPQRNV 218
+ DIVS R G A A +L E + G RRTW+VLR +P +
Sbjct 149 EA-DIVSAGYRVGKTAPAALVALYE---------QVVGPYPAPASRRTWIVLRADPDKTR 198
Query 219 AAVACRDS----LASTLVAATERLVQDLDGQSCAARPVTADELTEVDSAVLADLEPTWSR 274
+ R+ LA LV++T R+ L + ARP A + D A E ++ R
Sbjct 199 KSALRRNEGVAGLAQYLVSSTTRIADHLASKGVDARP--ARSFDDFDRAT----EISFER 252
Query 275 PGWRHLKHFNGYATSF 290
W +K + + ++
Sbjct 253 ETWSMVKGRSTFTAAY 268
>gi|312140883|ref|YP_004008219.1| integral membrane protein [Rhodococcus equi 103S]
gi|311890222|emb|CBH49540.1| putative integral membrane protein [Rhodococcus equi 103S]
Length=549
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 86/301 (29%), Positives = 128/301 (43%), Gaps = 37/301 (12%)
Query 84 GTTLGAGCT--PAIDHQRRF--GRDTVGVREYNGRLVSVIEVTCGESGPSGRHWHR---- 135
GT LG T P I F +TVG+ G++V+V+E+ PSG HW R
Sbjct 70 GTVLGLIGTRRPTIGRTTDFHAASETVGLHWIAGQVVAVVELLP----PSG-HWTRVTRE 124
Query 136 --KSPVPMLPVVAVADGLRQFDIHLDGIDIVSVLVRGGVDAAKASASLQEWEPQGWKSEE 193
SP LPV A+A L Q D+ L GIDIV+ G A + + + + +
Sbjct 125 RVDSP-DHLPVAALASCLNQHDVTLGGIDIVA----HGSRAVTGTPAAEVY-------DN 172
Query 194 RAGDRTVADRRRTWLVLRMNPQRNVAAVACR----DSLASTLVAATERLVQDLDGQSCAA 249
G RR W+ LR + + A+VA R + A T+ A R+V+ L A+
Sbjct 173 LVGPLPAVARRTVWVALRFDAAADGASVARRGGGVEGAARTVAVAARRVVRALGDAGYAS 232
Query 250 RPVTADELTEVDSAVLADLEPTWSRPGWRHLKHFNGYATSFWVTPSDITSETLDELCLPD 309
R + A ++ + + + P W H+ T + P ++ E L +
Sbjct 233 RILPAADVESAAALICRGVHPDAMDQQWSHVPLQGLCNTGNAIDPRHLSRELLTAVWA-- 290
Query 310 SPEVGTTVVTVRLTTRVGSPALSAWVRYHSDTR-LPKEVA--AGLNRLTGRQLAAVRASL 366
P VGTT VTVRL ++ + + TR +P GL + GR A+ A L
Sbjct 291 HPGVGTT-VTVRLRPAADKDSVLVGAAFRTTTRAVPSRGLRHPGLISMQGRHRDALVAQL 349
Query 367 P 367
P
Sbjct 350 P 350
>gi|118468438|ref|YP_884498.1| hypothetical protein MSMEG_0082 [Mycobacterium smegmatis str.
MC2 155]
gi|118169725|gb|ABK70621.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=464
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 65/251 (26%), Positives = 100/251 (40%), Gaps = 45/251 (17%)
Query 41 HHVAWWVGVGVAAVVTLLSVVSYHGITVISGLATWVRDWSADPGTTLGAGCTPAIDHQRR 100
H W+G+ + A++ L SV++ G+ I+G + W +T PA+
Sbjct 32 HFDLLWLGITLGALIALFSVLTIRGLR-ITGWVRAIFSWRRRHRSTPDIASEPAVGSTVM 90
Query 101 FGRDTVGVREYNGRLVSVIEVTCGESGPSGRHWHRKSPVPMLPVV-----AVADGL---- 151
G D V VR L++VIE+ P P P V A+ D +
Sbjct 91 PG-DHVAVRWQGDYLIAVIELV---------------PRPFTPTVIVNGSAMTDDVVNTK 134
Query 152 ---RQFDIHLDGI--DIVSVLVRGGVDAAKASASLQEWEPQGWKSEERAGDRTVADRRRT 206
R + H + D+VS R G A + +L E + G RRT
Sbjct 135 LVERLLEAHCPDLEADVVSAGYRVGKTAPASLIALYE---------QVVGPYPAPANRRT 185
Query 207 WLVLRMNPQRNVAAVACRDS----LASTLVAATERLVQDLDGQSCAARPVTADELTEVDS 262
W+VLR +P++ + RDS LA LVA+ R+ L AR + + E +
Sbjct 186 WIVLRADPEKTQRSAHRRDSGVSGLARYLVASATRIADQLASNGVDARCCRSFDDYEKAT 245
Query 263 AVLADLEPTWS 273
+ + E TWS
Sbjct 246 EISYERE-TWS 255
>gi|256380562|ref|YP_003104222.1| hypothetical protein Amir_6577 [Actinosynnema mirum DSM 43827]
gi|255924865|gb|ACU40376.1| hypothetical protein Amir_6577 [Actinosynnema mirum DSM 43827]
Length=442
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 118/300 (40%), Gaps = 45/300 (15%)
Query 94 AIDHQRRFGRDTVGVREYNGRLVSVIEV--TCGESGPSGRHWHRKSPVPMLPVVAVADGL 151
+DH+RR +G+ + G +V+ V T G P G P LP+ A+ L
Sbjct 157 GVDHERR----PLGLAWHQGAWTAVLLVDPTPGLINPVGS-------APNLPLGALVPCL 205
Query 152 RQFDIHLDGIDIVSVLVRGGVDAAKASASLQEWEPQGWKSEERAGDRTVADRRRTWLVLR 211
+ LD I ++ G SASL P E G A RR TW+ +R
Sbjct 206 EDRGVVLDAISVIWHCYPG-------SASLSANSPALTSYLELLGPLPTASRRTTWIAVR 258
Query 212 MNPQRNVAAVACRDSLA----STLVAATERLVQDLDGQSCAARPVTADELTEVD------ 261
++P+R AA+ R L+ A R+ L+ + RP+ ADEL
Sbjct 259 LDPKRCAAAIRERGGGVVGAHRALIGALSRVRNALESVGVSIRPLDADELIRAGISAAEL 318
Query 262 SAVLADLEPTWSRPGWRHLKHFNGYATSFWVT--PSDITSETLDELCLPDSPEVGTTVVT 319
++V P R W + +S+ +T PS L+ L + T ++
Sbjct 319 TSVAGSANPVSLREKWSGVSAGGVGHSSYAITGWPSKGMRANLNGLTGVRALS-STLSMS 377
Query 320 VRLTTRVGSPALSAWVRYH---------SDTRLPK---EVAAGLNRLTGRQLAAVRASLP 367
+ ++ G L VR +DT+L ++ L L G Q+A + A+LP
Sbjct 378 ISPSSEDGRVGLRGLVRVSARNQAQLDTADTKLKAMSDKLDITLTPLNGMQVAGLSATLP 437
>gi|325675479|ref|ZP_08155163.1| hypothetical protein HMPREF0724_12945 [Rhodococcus equi ATCC
33707]
gi|325553450|gb|EGD23128.1| hypothetical protein HMPREF0724_12945 [Rhodococcus equi ATCC
33707]
Length=549
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 81/279 (30%), Positives = 120/279 (44%), Gaps = 37/279 (13%)
Query 104 DTVGVREYNGRLVSVIEVTCGESGPSGRHWHR------KSPVPMLPVVAVADGLRQFDIH 157
+TVG+ G++V+V+E+ PSG HW R SP LPV A+A L Q D+
Sbjct 94 ETVGLHWIAGQVVAVVELLP----PSG-HWTRVTRERVDSP-DHLPVAALASCLNQHDVT 147
Query 158 LDGIDIVSVLVRG--GVDAAKASASLQEWEPQGWKSEERAGDRTVADRRRTWLVLRMNPQ 215
L GIDIV+ R G AA+ +L G RR W+ LR +
Sbjct 148 LGGIDIVAHGSRAVTGTPAAEVYDNL-------------VGPLPAVARRTVWVALRFDAA 194
Query 216 RNVAAVACR----DSLASTLVAATERLVQDLDGQSCAARPVTADELTEVDSAVLADLEPT 271
+ A+VA R + A T+ A R+V+ L A+R + A ++ + + + P
Sbjct 195 ADGASVARRGGGEEGAARTVAVAARRVVRALGDAGYASRILPAADVESAAALICRGVHPD 254
Query 272 WSRPGWRHLKHFNGYATSFWVTPSDITSETLDELCLPDSPEVGTTVVTVRLTTRVGSPAL 331
W H+ T + P ++ E L + P VGTT VTVRL ++
Sbjct 255 AMDQQWSHVPLQGLCNTGNAIDPRHLSRELLTAVWA--HPGVGTT-VTVRLRPAADKDSV 311
Query 332 SAWVRYHSDTR-LPKEVA--AGLNRLTGRQLAAVRASLP 367
+ + TR +P GL + GR A+ A LP
Sbjct 312 LVGAAFRTTTRAVPSRGLRHPGLISMQGRHRDALVAQLP 350
>gi|296164032|ref|ZP_06846655.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295900580|gb|EFG79963.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=514
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 70/269 (27%), Positives = 120/269 (45%), Gaps = 23/269 (8%)
Query 105 TVGVREYNGRLVSVIEVTCGESG-PSGRHWHRKSPVPMLPVVAVADGLRQFDIHLDGIDI 163
TVGV +G VS + G+ P+ H + +P+ +A +++ + +D
Sbjct 92 TVGV-VIDGHTVSTMITVLGKPYIPTLLHADHTKTLNTVPISVIAQEMQRCGLSVD---- 146
Query 164 VSVLVRGGVDAAKASASLQEWEPQGWKSEERAGDRTVADRRRTWLVLRMNPQ--RNVAAV 221
V ++ G A A L E +G + AG R+V LV+R + + R + +
Sbjct 147 VDIICEGSRTARDNYAELYEAALRGLPA---AGQRSVT------LVVRFDTRSDRILPGL 197
Query 222 ACRDSLASTLVAATERLVQDLDGQSCAARPVTADELTEVDSAVLADLEPTWS--RPGWRH 279
R VAA++R+ + L +C AR +TA ++ + +A L E + + W +
Sbjct 198 LWRRDTIGAAVAASQRITRALCQTNCRARLLTAAQMNDAVAASLGGPENATASYQDRWTN 257
Query 280 LKH-FNGYATSFWVTPSDITSETLDELCLPDSPEVGTTVVTVRLTTRVGSPALSAWVRYH 338
L+ Y T+++ + SD+ S LD++ S TT+V + G A SA VR
Sbjct 258 LQRGGKAYVTAYFFSASDVRSAQLDDVWAYQSDH--TTLVIALRSDPAGVRA-SALVRLT 314
Query 339 SDTRLPKEVAAGLNRLTGRQLAAVRASLP 367
+ L LN + GRQ A+ +LP
Sbjct 315 TVQPLASSPRLVLNPMAGRQWEALALTLP 343
>gi|183985429|ref|YP_001853720.1| hypothetical protein MMAR_5458 [Mycobacterium marinum M]
gi|183178755|gb|ACC43865.1| conserved hypothetical membrane protein [Mycobacterium marinum
M]
Length=465
Score = 43.9 bits (102), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 65/269 (25%), Positives = 100/269 (38%), Gaps = 52/269 (19%)
Query 41 HHVAWWVGVGVAAVVTLLSVVSYHGITVISGLATWVRDWSADPGTTLGAGCTPAIDHQRR 100
H WWVG+ + A+ +++ V++ G V +AT V W P + +
Sbjct 33 HMRYWWVGIALVALGVIVATVTFSGRRVTGWVAT-VFAWLRRRRRPPDVPSEPVVGATVK 91
Query 101 FGRDTVGVREYNGRLVSVIEVTCGESGPSGRHWHRKSPVPMLPVVAVADGLRQFDIHLDG 160
G D V VR L++VIE+ P P P V V DG D LD
Sbjct 92 PG-DHVAVRWRRDHLIAVIEL---------------KPRPFTPTVIV-DGKAHTDDVLDT 134
Query 161 ---------------IDIVSVLVRGGVDAAKASASLQEWEPQGWKSEERAGDRTVADRRR 205
D+VS R G A++ SL + G RR
Sbjct 135 RLLEDLLSVHCPDLEADVVSAGYRVGNTASEEVVSLY---------QRVIGADPAPANRR 185
Query 206 TWLVLRMNPQRNVAAVACRDS----LASTLVAATERLVQDLDGQSCAARPVTADELTEVD 261
TW++LR +P++ + R++ LA LVA+ R+ L A V + D
Sbjct 186 TWIMLRADPEQTRKSAQRREAGLAGLARYLVASATRIADGLASNGVDA--VCGRSFDDYD 243
Query 262 SAVLADLEPTWSRPGWRHLKHFNGYATSF 290
A + + R W +K + Y ++
Sbjct 244 RAT----DIGYVREKWSMIKGADSYTAAY 268
>gi|300782643|ref|YP_003762934.1| hypothetical protein AMED_0712 [Amycolatopsis mediterranei U32]
gi|299792157|gb|ADJ42532.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
gi|340524014|gb|AEK39219.1| hypothetical protein RAM_03635 [Amycolatopsis mediterranei S699]
Length=411
Score = 43.1 bits (100), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 70/277 (26%), Positives = 112/277 (41%), Gaps = 37/277 (13%)
Query 95 IDHQRRFGRDTVGVREYNGRLVSVIEVTCGESGPSGRHWHRKSPVPMLPVVAVADGLRQF 154
+DH+R+ VG+ +G +V+ V P+ + P LP+ A+A L
Sbjct 127 VDHERQ----QVGLAWNDGTWTAVLLVE-----PAPALITQADGAPSLPLSALAPCLEDR 177
Query 155 DIHLDGIDIVSVLVRGGVDAAKASASLQEWEPQGWKSEERAGDRTVADRRRTWLVLRMNP 214
+ LD I ++ G SA+L P E G A RR TW+ +R++P
Sbjct 178 GVVLDSIQMIWHCYPG-------SAALPSDSPALSSYMEVLGPLPAAARRTTWVAIRLDP 230
Query 215 QRNVAAVACRDSLA----STLVAATERLVQDLDGQSCAARP----------VTADELTEV 260
+R AA+ R L+ A R+ L+ Q RP ++A ELT V
Sbjct 231 RRCPAAIRERGGGVVGAHRALIGALSRVRNALESQGVPTRPLDPDELLRAGISAAELTSV 290
Query 261 -DSAVLADLEPTWSRPGWRHLKHFNGYATSFWVTPSDITSETLDELCLPDSPEVGTTVVT 319
S ++ WS + H + YA + W P + +L+ L + T ++
Sbjct 291 AGSPTKVTMQERWSGVTAAGIGHAS-YAITGW--PKGKVTNSLNALTSVRALS-ATLAMS 346
Query 320 VRLTTRVGSPALSAWVRYHSDTRLPKEVAAGLNRLTG 356
+ + G L VR + R P+E+ A RL G
Sbjct 347 ISPASDEGKIGLRGVVRLSA--RNPRELDAADQRLQG 381
>gi|333988688|ref|YP_004521302.1| hypothetical protein JDM601_0048 [Mycobacterium sp. JDM601]
gi|333484656|gb|AEF34048.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=517
Score = 41.6 bits (96), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/105 (29%), Positives = 52/105 (50%), Gaps = 1/105 (0%)
Query 201 ADRRRTWLVLRMNPQRNVAAVACRDSLASTLVAATERLVQDLDGQSCAARPVTADELTEV 260
A +R TWL+LR+ N AA+ R +L +T VA +++ L + AR TA +L E+
Sbjct 174 AGQRETWLLLRLRVIDNTAALRWRTTLGATAVAVAQQIAGLLRCEGLRARVATASDLVEL 233
Query 261 DSAVLADLEPTWSRPGWRHLKHFNGYATSFWVTPSDITSETLDEL 305
D + L W+ L+ G+ T++ I ++ L ++
Sbjct 234 DRRLGGALLLA-GAERWKTLRTEGGWVTTYAYPARAINAQLLAQV 277
Lambda K H
0.319 0.133 0.417
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 807118285248
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40