BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1800
Length=655
Score E
Sequences producing significant alignments: (Bits) Value
gi|57116915|ref|YP_177839.1| PPE family protein [Mycobacterium t... 1291 0.0
gi|15841269|ref|NP_336306.1| PPE family protein [Mycobacterium t... 1289 0.0
gi|289443272|ref|ZP_06433016.1| PPE family protein [Mycobacteriu... 1285 0.0
gi|289574477|ref|ZP_06454704.1| PPE family protein [Mycobacteriu... 1283 0.0
gi|121637701|ref|YP_977924.1| PPE family protein [Mycobacterium ... 1280 0.0
gi|31792988|ref|NP_855481.1| PPE family protein [Mycobacterium b... 1280 0.0
gi|308231943|ref|ZP_07663959.1| PPE family protein [Mycobacteriu... 1133 0.0
gi|289569870|ref|ZP_06450097.1| PPE family protein [Mycobacteriu... 1090 0.0
gi|307084416|ref|ZP_07493529.1| PE-PPE domain protein [Mycobacte... 1068 0.0
gi|183981048|ref|YP_001849339.1| PPE family protein [Mycobacteri... 840 0.0
gi|339298363|gb|AEJ50473.1| PPE family protein [Mycobacterium tu... 639 0.0
gi|183981512|ref|YP_001849803.1| PPE family protein, PPE28 [Myco... 544 2e-152
gi|118617931|ref|YP_906263.1| PPE family protein [Mycobacterium ... 530 5e-148
gi|240168595|ref|ZP_04747254.1| PPE family protein, PPE28 [Mycob... 494 3e-137
gi|240168157|ref|ZP_04746816.1| PE family protein [Mycobacterium... 405 2e-110
gi|240173260|ref|ZP_04751918.1| PPE family protein [Mycobacteriu... 399 7e-109
gi|183980402|ref|YP_001848693.1| PE family protein [Mycobacteriu... 399 9e-109
gi|240173252|ref|ZP_04751910.1| PPE family protein [Mycobacteriu... 399 1e-108
gi|183983416|ref|YP_001851707.1| PE family protein [Mycobacteriu... 398 2e-108
gi|183984291|ref|YP_001852582.1| PE family protein [Mycobacteriu... 395 9e-108
gi|183980401|ref|YP_001848692.1| PE family protein [Mycobacteriu... 393 6e-107
gi|183980400|ref|YP_001848691.1| PE family protein [Mycobacteriu... 385 2e-104
gi|183980403|ref|YP_001848694.1| PE family protein [Mycobacteriu... 383 5e-104
gi|340625188|ref|YP_004743640.1| pe family protein [Mycobacteriu... 383 5e-104
gi|183983956|ref|YP_001852247.1| PPE family protein [Mycobacteri... 377 3e-102
gi|240168156|ref|ZP_04746815.1| PE family protein [Mycobacterium... 371 2e-100
gi|118616727|ref|YP_905059.1| PE family protein [Mycobacterium u... 363 4e-98
gi|15839533|ref|NP_334570.1| PE family protein [Mycobacterium tu... 363 5e-98
gi|340625187|ref|YP_004743639.1| PE family protein [Mycobacteriu... 361 2e-97
gi|253797071|ref|YP_003030072.1| PE family protein [Mycobacteriu... 360 4e-97
gi|183983451|ref|YP_001851742.1| PE family protein [Mycobacteriu... 355 2e-95
gi|31791329|ref|NP_853822.1| PE family protein [Mycobacterium bo... 353 4e-95
gi|289572730|ref|ZP_06452957.1| PE family protein [Mycobacterium... 353 5e-95
gi|57116694|ref|YP_177695.1| PE family protein [Mycobacterium tu... 353 5e-95
gi|308231479|ref|ZP_07412575.2| PE family protein [Mycobacterium... 353 5e-95
gi|308369315|ref|ZP_07417319.2| PE family protein [Mycobacterium... 351 2e-94
gi|306805944|ref|ZP_07442612.1| PE family protein [Mycobacterium... 351 2e-94
gi|339298365|gb|AEJ50475.1| PPE family protein [Mycobacterium tu... 350 4e-94
gi|148821344|ref|YP_001286098.1| PE family protein [Mycobacteriu... 347 3e-93
gi|15839534|ref|NP_334571.1| PE family protein [Mycobacterium tu... 347 3e-93
gi|289441524|ref|ZP_06431268.1| LOW QUALITY PROTEIN: PE family p... 347 3e-93
gi|289764268|ref|ZP_06523646.1| PE family protein [Mycobacterium... 347 3e-93
gi|31791330|ref|NP_853823.1| PE family protein [Mycobacterium bo... 347 3e-93
gi|254549087|ref|ZP_05139534.1| PE family protein [Mycobacterium... 347 5e-93
gi|167970270|ref|ZP_02552547.1| PE family protein [Mycobacterium... 347 5e-93
gi|339293217|gb|AEJ45328.1| PE family protein [Mycobacterium tub... 345 2e-92
gi|240168158|ref|ZP_04746817.1| PE family protein [Mycobacterium... 342 1e-91
gi|31793793|ref|NP_856286.1| PPE family protein [Mycobacterium b... 338 3e-90
gi|15842148|ref|NP_337185.1| PPE family protein [Mycobacterium t... 333 7e-89
gi|57117005|ref|YP_177893.1| PPE family protein [Mycobacterium t... 333 7e-89
>gi|57116915|ref|YP_177839.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
gi|148661606|ref|YP_001283129.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
gi|148823014|ref|YP_001287768.1| PPE family protein [Mycobacterium tuberculosis F11]
43 more sequence titles
Length=655
Score = 1291 bits (3340), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 655/655 (100%), Positives = 655/655 (100%), Gaps = 0/655 (0%)
Query 1 MLPNFAVLPPEVNSARVFAGAGSAPMLAAAAAWDDLASELHCAAMSFGSVTSGLVVGWWQ 60
MLPNFAVLPPEVNSARVFAGAGSAPMLAAAAAWDDLASELHCAAMSFGSVTSGLVVGWWQ
Sbjct 1 MLPNFAVLPPEVNSARVFAGAGSAPMLAAAAAWDDLASELHCAAMSFGSVTSGLVVGWWQ 60
Query 61 GSASAAMVDAAASYIGWLSTSAAHAEGAAGLARAAVSVFEEALAATVHPAMVAANRAQVA 120
GSASAAMVDAAASYIGWLSTSAAHAEGAAGLARAAVSVFEEALAATVHPAMVAANRAQVA
Sbjct 61 GSASAAMVDAAASYIGWLSTSAAHAEGAAGLARAAVSVFEEALAATVHPAMVAANRAQVA 120
Query 121 SLVASNLFGQNAPAIAALESLYECMWAQDAAAMAGYYVGASAVATQLASWLQRLQSIPGA 180
SLVASNLFGQNAPAIAALESLYECMWAQDAAAMAGYYVGASAVATQLASWLQRLQSIPGA
Sbjct 121 SLVASNLFGQNAPAIAALESLYECMWAQDAAAMAGYYVGASAVATQLASWLQRLQSIPGA 180
Query 181 ASLDARLPSSAEAPMGVVRAVNSAIAANAAAAQTVGLVMGGSGTPIPSARYVELANALYM 240
ASLDARLPSSAEAPMGVVRAVNSAIAANAAAAQTVGLVMGGSGTPIPSARYVELANALYM
Sbjct 181 ASLDARLPSSAEAPMGVVRAVNSAIAANAAAAQTVGLVMGGSGTPIPSARYVELANALYM 240
Query 241 SGSVPGVIAQALFTPQGLYPVVVIKNLTFDSSVAQGAVILESAIRQQIAAGNNVTVFGYS 300
SGSVPGVIAQALFTPQGLYPVVVIKNLTFDSSVAQGAVILESAIRQQIAAGNNVTVFGYS
Sbjct 241 SGSVPGVIAQALFTPQGLYPVVVIKNLTFDSSVAQGAVILESAIRQQIAAGNNVTVFGYS 300
Query 301 QSATISSLVMANLAASADPPSPDELSFTLIGNPNNPNGGVATRFPGISFPSLGVTATGAT 360
QSATISSLVMANLAASADPPSPDELSFTLIGNPNNPNGGVATRFPGISFPSLGVTATGAT
Sbjct 301 QSATISSLVMANLAASADPPSPDELSFTLIGNPNNPNGGVATRFPGISFPSLGVTATGAT 360
Query 361 PHNLYPTKIYTIEYDGVADFPRYPLNFVSTLNAIAGTYYVHSNYFILTPEQIDAAVPLTN 420
PHNLYPTKIYTIEYDGVADFPRYPLNFVSTLNAIAGTYYVHSNYFILTPEQIDAAVPLTN
Sbjct 361 PHNLYPTKIYTIEYDGVADFPRYPLNFVSTLNAIAGTYYVHSNYFILTPEQIDAAVPLTN 420
Query 421 TVGPTMTQYYIIRTENLPLLEPLRSVPIVGNPLANLVQPNLKVIVNLGYGDPAYGYSTSP 480
TVGPTMTQYYIIRTENLPLLEPLRSVPIVGNPLANLVQPNLKVIVNLGYGDPAYGYSTSP
Sbjct 421 TVGPTMTQYYIIRTENLPLLEPLRSVPIVGNPLANLVQPNLKVIVNLGYGDPAYGYSTSP 480
Query 481 PNVATPFGLFPEVSPVVIADALVAGTQQGIGDFAYDVSHLELPLPADGSTMPSTAPGSGT 540
PNVATPFGLFPEVSPVVIADALVAGTQQGIGDFAYDVSHLELPLPADGSTMPSTAPGSGT
Sbjct 481 PNVATPFGLFPEVSPVVIADALVAGTQQGIGDFAYDVSHLELPLPADGSTMPSTAPGSGT 540
Query 541 PVPPLSIDSLIDDLQVANRNLANTISKVAATSYATVLPTADIANAALTIVPSYNIHLFLE 600
PVPPLSIDSLIDDLQVANRNLANTISKVAATSYATVLPTADIANAALTIVPSYNIHLFLE
Sbjct 541 PVPPLSIDSLIDDLQVANRNLANTISKVAATSYATVLPTADIANAALTIVPSYNIHLFLE 600
Query 601 GIQQALKGDPMGLVNAVGYPLAADVALFTAAGGLQLLIIISAGRTIANDISAIVP 655
GIQQALKGDPMGLVNAVGYPLAADVALFTAAGGLQLLIIISAGRTIANDISAIVP
Sbjct 601 GIQQALKGDPMGLVNAVGYPLAADVALFTAAGGLQLLIIISAGRTIANDISAIVP 655
>gi|15841269|ref|NP_336306.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
gi|254231984|ref|ZP_04925311.1| PPE family protein [Mycobacterium tuberculosis C]
gi|254364631|ref|ZP_04980677.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem]
gi|13881497|gb|AAK46120.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
gi|124601043|gb|EAY60053.1| PPE family protein [Mycobacterium tuberculosis C]
gi|134150145|gb|EBA42190.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem]
gi|323719678|gb|EGB28799.1| PPE family protein [Mycobacterium tuberculosis CDC1551A]
Length=655
Score = 1289 bits (3336), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 654/655 (99%), Positives = 654/655 (99%), Gaps = 0/655 (0%)
Query 1 MLPNFAVLPPEVNSARVFAGAGSAPMLAAAAAWDDLASELHCAAMSFGSVTSGLVVGWWQ 60
MLPNFAVLPPEVNSARVFAGAGSAPMLAAAAAWDDLASELHCAAMSFGSVTSGLVVGWWQ
Sbjct 1 MLPNFAVLPPEVNSARVFAGAGSAPMLAAAAAWDDLASELHCAAMSFGSVTSGLVVGWWQ 60
Query 61 GSASAAMVDAAASYIGWLSTSAAHAEGAAGLARAAVSVFEEALAATVHPAMVAANRAQVA 120
GSASAAMVDAAASYIGWLSTSAAHAEGAAGLARAAVSVFEEALAATVHPAMVAANRAQVA
Sbjct 61 GSASAAMVDAAASYIGWLSTSAAHAEGAAGLARAAVSVFEEALAATVHPAMVAANRAQVA 120
Query 121 SLVASNLFGQNAPAIAALESLYECMWAQDAAAMAGYYVGASAVATQLASWLQRLQSIPGA 180
SLVASNLFGQNAPAIAALESLYECMWAQD AAMAGYYVGASAVATQLASWLQRLQSIPGA
Sbjct 121 SLVASNLFGQNAPAIAALESLYECMWAQDVAAMAGYYVGASAVATQLASWLQRLQSIPGA 180
Query 181 ASLDARLPSSAEAPMGVVRAVNSAIAANAAAAQTVGLVMGGSGTPIPSARYVELANALYM 240
ASLDARLPSSAEAPMGVVRAVNSAIAANAAAAQTVGLVMGGSGTPIPSARYVELANALYM
Sbjct 181 ASLDARLPSSAEAPMGVVRAVNSAIAANAAAAQTVGLVMGGSGTPIPSARYVELANALYM 240
Query 241 SGSVPGVIAQALFTPQGLYPVVVIKNLTFDSSVAQGAVILESAIRQQIAAGNNVTVFGYS 300
SGSVPGVIAQALFTPQGLYPVVVIKNLTFDSSVAQGAVILESAIRQQIAAGNNVTVFGYS
Sbjct 241 SGSVPGVIAQALFTPQGLYPVVVIKNLTFDSSVAQGAVILESAIRQQIAAGNNVTVFGYS 300
Query 301 QSATISSLVMANLAASADPPSPDELSFTLIGNPNNPNGGVATRFPGISFPSLGVTATGAT 360
QSATISSLVMANLAASADPPSPDELSFTLIGNPNNPNGGVATRFPGISFPSLGVTATGAT
Sbjct 301 QSATISSLVMANLAASADPPSPDELSFTLIGNPNNPNGGVATRFPGISFPSLGVTATGAT 360
Query 361 PHNLYPTKIYTIEYDGVADFPRYPLNFVSTLNAIAGTYYVHSNYFILTPEQIDAAVPLTN 420
PHNLYPTKIYTIEYDGVADFPRYPLNFVSTLNAIAGTYYVHSNYFILTPEQIDAAVPLTN
Sbjct 361 PHNLYPTKIYTIEYDGVADFPRYPLNFVSTLNAIAGTYYVHSNYFILTPEQIDAAVPLTN 420
Query 421 TVGPTMTQYYIIRTENLPLLEPLRSVPIVGNPLANLVQPNLKVIVNLGYGDPAYGYSTSP 480
TVGPTMTQYYIIRTENLPLLEPLRSVPIVGNPLANLVQPNLKVIVNLGYGDPAYGYSTSP
Sbjct 421 TVGPTMTQYYIIRTENLPLLEPLRSVPIVGNPLANLVQPNLKVIVNLGYGDPAYGYSTSP 480
Query 481 PNVATPFGLFPEVSPVVIADALVAGTQQGIGDFAYDVSHLELPLPADGSTMPSTAPGSGT 540
PNVATPFGLFPEVSPVVIADALVAGTQQGIGDFAYDVSHLELPLPADGSTMPSTAPGSGT
Sbjct 481 PNVATPFGLFPEVSPVVIADALVAGTQQGIGDFAYDVSHLELPLPADGSTMPSTAPGSGT 540
Query 541 PVPPLSIDSLIDDLQVANRNLANTISKVAATSYATVLPTADIANAALTIVPSYNIHLFLE 600
PVPPLSIDSLIDDLQVANRNLANTISKVAATSYATVLPTADIANAALTIVPSYNIHLFLE
Sbjct 541 PVPPLSIDSLIDDLQVANRNLANTISKVAATSYATVLPTADIANAALTIVPSYNIHLFLE 600
Query 601 GIQQALKGDPMGLVNAVGYPLAADVALFTAAGGLQLLIIISAGRTIANDISAIVP 655
GIQQALKGDPMGLVNAVGYPLAADVALFTAAGGLQLLIIISAGRTIANDISAIVP
Sbjct 601 GIQQALKGDPMGLVNAVGYPLAADVALFTAAGGLQLLIIISAGRTIANDISAIVP 655
>gi|289443272|ref|ZP_06433016.1| PPE family protein [Mycobacterium tuberculosis T46]
gi|289447415|ref|ZP_06437159.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
gi|289750370|ref|ZP_06509748.1| PPE family protein [Mycobacterium tuberculosis T92]
gi|289753895|ref|ZP_06513273.1| PPE family protein [Mycobacterium tuberculosis EAS054]
gi|289416191|gb|EFD13431.1| PPE family protein [Mycobacterium tuberculosis T46]
gi|289420373|gb|EFD17574.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
gi|289690957|gb|EFD58386.1| PPE family protein [Mycobacterium tuberculosis T92]
gi|289694482|gb|EFD61911.1| PPE family protein [Mycobacterium tuberculosis EAS054]
Length=655
Score = 1285 bits (3326), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 654/655 (99%), Positives = 654/655 (99%), Gaps = 0/655 (0%)
Query 1 MLPNFAVLPPEVNSARVFAGAGSAPMLAAAAAWDDLASELHCAAMSFGSVTSGLVVGWWQ 60
MLPNFAVLPPEVNSARVFAGAGSAPMLAAAAAWDDLASELHCAAMSFGSVTSGLVVGWWQ
Sbjct 1 MLPNFAVLPPEVNSARVFAGAGSAPMLAAAAAWDDLASELHCAAMSFGSVTSGLVVGWWQ 60
Query 61 GSASAAMVDAAASYIGWLSTSAAHAEGAAGLARAAVSVFEEALAATVHPAMVAANRAQVA 120
GSASAAMVDAAASYIGWLSTSAAHAEGAAGLARAAVSVFEEALAATVHPAMVAANRAQVA
Sbjct 61 GSASAAMVDAAASYIGWLSTSAAHAEGAAGLARAAVSVFEEALAATVHPAMVAANRAQVA 120
Query 121 SLVASNLFGQNAPAIAALESLYECMWAQDAAAMAGYYVGASAVATQLASWLQRLQSIPGA 180
SLVASNLFGQNAPAIAALESLYE MWAQDAAAMAGYYVGASAVATQLASWLQRLQSIPGA
Sbjct 121 SLVASNLFGQNAPAIAALESLYEWMWAQDAAAMAGYYVGASAVATQLASWLQRLQSIPGA 180
Query 181 ASLDARLPSSAEAPMGVVRAVNSAIAANAAAAQTVGLVMGGSGTPIPSARYVELANALYM 240
ASLDARLPSSAEAPMGVVRAVNSAIAANAAAAQTVGLVMGGSGTPIPSARYVELANALYM
Sbjct 181 ASLDARLPSSAEAPMGVVRAVNSAIAANAAAAQTVGLVMGGSGTPIPSARYVELANALYM 240
Query 241 SGSVPGVIAQALFTPQGLYPVVVIKNLTFDSSVAQGAVILESAIRQQIAAGNNVTVFGYS 300
SGSVPGVIAQALFTPQGLYPVVVIKNLTFDSSVAQGAVILESAIRQQIAAGNNVTVFGYS
Sbjct 241 SGSVPGVIAQALFTPQGLYPVVVIKNLTFDSSVAQGAVILESAIRQQIAAGNNVTVFGYS 300
Query 301 QSATISSLVMANLAASADPPSPDELSFTLIGNPNNPNGGVATRFPGISFPSLGVTATGAT 360
QSATISSLVMANLAASADPPSPDELSFTLIGNPNNPNGGVATRFPGISFPSLGVTATGAT
Sbjct 301 QSATISSLVMANLAASADPPSPDELSFTLIGNPNNPNGGVATRFPGISFPSLGVTATGAT 360
Query 361 PHNLYPTKIYTIEYDGVADFPRYPLNFVSTLNAIAGTYYVHSNYFILTPEQIDAAVPLTN 420
PHNLYPTKIYTIEYDGVADFPRYPLNFVSTLNAIAGTYYVHSNYFILTPEQIDAAVPLTN
Sbjct 361 PHNLYPTKIYTIEYDGVADFPRYPLNFVSTLNAIAGTYYVHSNYFILTPEQIDAAVPLTN 420
Query 421 TVGPTMTQYYIIRTENLPLLEPLRSVPIVGNPLANLVQPNLKVIVNLGYGDPAYGYSTSP 480
TVGPTMTQYYIIRTENLPLLEPLRSVPIVGNPLANLVQPNLKVIVNLGYGDPAYGYSTSP
Sbjct 421 TVGPTMTQYYIIRTENLPLLEPLRSVPIVGNPLANLVQPNLKVIVNLGYGDPAYGYSTSP 480
Query 481 PNVATPFGLFPEVSPVVIADALVAGTQQGIGDFAYDVSHLELPLPADGSTMPSTAPGSGT 540
PNVATPFGLFPEVSPVVIADALVAGTQQGIGDFAYDVSHLELPLPADGSTMPSTAPGSGT
Sbjct 481 PNVATPFGLFPEVSPVVIADALVAGTQQGIGDFAYDVSHLELPLPADGSTMPSTAPGSGT 540
Query 541 PVPPLSIDSLIDDLQVANRNLANTISKVAATSYATVLPTADIANAALTIVPSYNIHLFLE 600
PVPPLSIDSLIDDLQVANRNLANTISKVAATSYATVLPTADIANAALTIVPSYNIHLFLE
Sbjct 541 PVPPLSIDSLIDDLQVANRNLANTISKVAATSYATVLPTADIANAALTIVPSYNIHLFLE 600
Query 601 GIQQALKGDPMGLVNAVGYPLAADVALFTAAGGLQLLIIISAGRTIANDISAIVP 655
GIQQALKGDPMGLVNAVGYPLAADVALFTAAGGLQLLIIISAGRTIANDISAIVP
Sbjct 601 GIQQALKGDPMGLVNAVGYPLAADVALFTAAGGLQLLIIISAGRTIANDISAIVP 655
>gi|289574477|ref|ZP_06454704.1| PPE family protein [Mycobacterium tuberculosis K85]
gi|339631854|ref|YP_004723496.1| PPE family protein [Mycobacterium africanum GM041182]
gi|289538908|gb|EFD43486.1| PPE family protein [Mycobacterium tuberculosis K85]
gi|339331210|emb|CCC26892.1| PPE family protein [Mycobacterium africanum GM041182]
Length=655
Score = 1283 bits (3320), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 653/655 (99%), Positives = 653/655 (99%), Gaps = 0/655 (0%)
Query 1 MLPNFAVLPPEVNSARVFAGAGSAPMLAAAAAWDDLASELHCAAMSFGSVTSGLVVGWWQ 60
MLPNFAVLPPEVNSARVFAGAGSAPMLAAAAAWDDLASELHCAAMSFGSVTSGLVVGWWQ
Sbjct 1 MLPNFAVLPPEVNSARVFAGAGSAPMLAAAAAWDDLASELHCAAMSFGSVTSGLVVGWWQ 60
Query 61 GSASAAMVDAAASYIGWLSTSAAHAEGAAGLARAAVSVFEEALAATVHPAMVAANRAQVA 120
GSASAAMVDAAASYIGWLSTSAAHAEGAAGLARAAVSVFEEALAATVHPAMVAANRAQVA
Sbjct 61 GSASAAMVDAAASYIGWLSTSAAHAEGAAGLARAAVSVFEEALAATVHPAMVAANRAQVA 120
Query 121 SLVASNLFGQNAPAIAALESLYECMWAQDAAAMAGYYVGASAVATQLASWLQRLQSIPGA 180
SLVASNLFGQNAPAIAALESLYE MWAQDAAAMAGYYVGASAVATQLASWLQRLQSIPGA
Sbjct 121 SLVASNLFGQNAPAIAALESLYEWMWAQDAAAMAGYYVGASAVATQLASWLQRLQSIPGA 180
Query 181 ASLDARLPSSAEAPMGVVRAVNSAIAANAAAAQTVGLVMGGSGTPIPSARYVELANALYM 240
ASLDARLPSSAEAPMGVVRAVNSAIAANAAAAQTVGLVMGGSGTPIPSARYVELANALYM
Sbjct 181 ASLDARLPSSAEAPMGVVRAVNSAIAANAAAAQTVGLVMGGSGTPIPSARYVELANALYM 240
Query 241 SGSVPGVIAQALFTPQGLYPVVVIKNLTFDSSVAQGAVILESAIRQQIAAGNNVTVFGYS 300
SGSVPGVIAQAL TPQGLYPVVVIKNLTFDSSVAQGAVILESAIRQQIAAGNNVTVFGYS
Sbjct 241 SGSVPGVIAQALVTPQGLYPVVVIKNLTFDSSVAQGAVILESAIRQQIAAGNNVTVFGYS 300
Query 301 QSATISSLVMANLAASADPPSPDELSFTLIGNPNNPNGGVATRFPGISFPSLGVTATGAT 360
QSATISSLVMANLAASADPPSPDELSFTLIGNPNNPNGGVATRFPGISFPSLGVTATGAT
Sbjct 301 QSATISSLVMANLAASADPPSPDELSFTLIGNPNNPNGGVATRFPGISFPSLGVTATGAT 360
Query 361 PHNLYPTKIYTIEYDGVADFPRYPLNFVSTLNAIAGTYYVHSNYFILTPEQIDAAVPLTN 420
PHNLYPTKIYTIEYDGVADFPRYPLNFVSTLNAIAGTYYVHSNYFILTPEQIDAAVPLTN
Sbjct 361 PHNLYPTKIYTIEYDGVADFPRYPLNFVSTLNAIAGTYYVHSNYFILTPEQIDAAVPLTN 420
Query 421 TVGPTMTQYYIIRTENLPLLEPLRSVPIVGNPLANLVQPNLKVIVNLGYGDPAYGYSTSP 480
TVGPTMTQYYIIRTENLPLLEPLRSVPIVGNPLANLVQPNLKVIVNLGYGDPAYGYSTSP
Sbjct 421 TVGPTMTQYYIIRTENLPLLEPLRSVPIVGNPLANLVQPNLKVIVNLGYGDPAYGYSTSP 480
Query 481 PNVATPFGLFPEVSPVVIADALVAGTQQGIGDFAYDVSHLELPLPADGSTMPSTAPGSGT 540
PNVATPFGLFPEVSPVVIADALVAGTQQGIGDFAYDVSHLELPLPADGSTMPSTAPGSGT
Sbjct 481 PNVATPFGLFPEVSPVVIADALVAGTQQGIGDFAYDVSHLELPLPADGSTMPSTAPGSGT 540
Query 541 PVPPLSIDSLIDDLQVANRNLANTISKVAATSYATVLPTADIANAALTIVPSYNIHLFLE 600
PVPPLSIDSLIDDLQVANRNLANTISKVAATSYATVLPTADIANAALTIVPSYNIHLFLE
Sbjct 541 PVPPLSIDSLIDDLQVANRNLANTISKVAATSYATVLPTADIANAALTIVPSYNIHLFLE 600
Query 601 GIQQALKGDPMGLVNAVGYPLAADVALFTAAGGLQLLIIISAGRTIANDISAIVP 655
GIQQALKGDPMGLVNAVGYPLAADVALFTAAGGLQLLIIISAGRTIANDISAIVP
Sbjct 601 GIQQALKGDPMGLVNAVGYPLAADVALFTAAGGLQLLIIISAGRTIANDISAIVP 655
>gi|121637701|ref|YP_977924.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224990185|ref|YP_002644872.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|121493348|emb|CAL71819.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224773298|dbj|BAH26104.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|341601728|emb|CCC64401.1| PPE family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length=655
Score = 1280 bits (3311), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 651/655 (99%), Positives = 652/655 (99%), Gaps = 0/655 (0%)
Query 1 MLPNFAVLPPEVNSARVFAGAGSAPMLAAAAAWDDLASELHCAAMSFGSVTSGLVVGWWQ 60
MLPNFAVLPPEVNSARVFAGAGSAPMLAAAAAWDDLASELHCAAMSFGSVTSGLVVGWWQ
Sbjct 1 MLPNFAVLPPEVNSARVFAGAGSAPMLAAAAAWDDLASELHCAAMSFGSVTSGLVVGWWQ 60
Query 61 GSASAAMVDAAASYIGWLSTSAAHAEGAAGLARAAVSVFEEALAATVHPAMVAANRAQVA 120
GSASAAMVDAAASYIGWLSTSAAHAEGAAGLARAAVSVFEEALAATVHPAMVAANRAQVA
Sbjct 61 GSASAAMVDAAASYIGWLSTSAAHAEGAAGLARAAVSVFEEALAATVHPAMVAANRAQVA 120
Query 121 SLVASNLFGQNAPAIAALESLYECMWAQDAAAMAGYYVGASAVATQLASWLQRLQSIPGA 180
SLVASNLFGQNAPAIAALESLYE MWAQDAAAMAGYYVGASAVATQLASWLQRLQSIPGA
Sbjct 121 SLVASNLFGQNAPAIAALESLYEWMWAQDAAAMAGYYVGASAVATQLASWLQRLQSIPGA 180
Query 181 ASLDARLPSSAEAPMGVVRAVNSAIAANAAAAQTVGLVMGGSGTPIPSARYVELANALYM 240
ASLDARLPSSAEAPMGVVRAVNSAIAANAAAAQTVGLVMGGSGTPIPSARYVELANALYM
Sbjct 181 ASLDARLPSSAEAPMGVVRAVNSAIAANAAAAQTVGLVMGGSGTPIPSARYVELANALYM 240
Query 241 SGSVPGVIAQALFTPQGLYPVVVIKNLTFDSSVAQGAVILESAIRQQIAAGNNVTVFGYS 300
SGSVPGVIAQAL TPQGLYPVVVIKNLTFDSSVAQGAVILESAIRQQIAAGNNVTVFGYS
Sbjct 241 SGSVPGVIAQALVTPQGLYPVVVIKNLTFDSSVAQGAVILESAIRQQIAAGNNVTVFGYS 300
Query 301 QSATISSLVMANLAASADPPSPDELSFTLIGNPNNPNGGVATRFPGISFPSLGVTATGAT 360
QSATISSLVMANLAASADPPSPDELSFTLIGNPNNPNGGVATRFPGISFPSLGVTATGAT
Sbjct 301 QSATISSLVMANLAASADPPSPDELSFTLIGNPNNPNGGVATRFPGISFPSLGVTATGAT 360
Query 361 PHNLYPTKIYTIEYDGVADFPRYPLNFVSTLNAIAGTYYVHSNYFILTPEQIDAAVPLTN 420
PHNLYPTKIYTIEYDGVADFPRYPLNFVSTLNAIAGTYYVHSNYFILTPEQIDAAVPLTN
Sbjct 361 PHNLYPTKIYTIEYDGVADFPRYPLNFVSTLNAIAGTYYVHSNYFILTPEQIDAAVPLTN 420
Query 421 TVGPTMTQYYIIRTENLPLLEPLRSVPIVGNPLANLVQPNLKVIVNLGYGDPAYGYSTSP 480
TVGPTMTQYYI+RTENLPLLEPLRSVPIVGNPLANLVQPNLKVIVNLGYGDPAYGYSTSP
Sbjct 421 TVGPTMTQYYIVRTENLPLLEPLRSVPIVGNPLANLVQPNLKVIVNLGYGDPAYGYSTSP 480
Query 481 PNVATPFGLFPEVSPVVIADALVAGTQQGIGDFAYDVSHLELPLPADGSTMPSTAPGSGT 540
PNVATPFGLFPEVSPVVIADAL AGTQQGIGDFAYDVSHLELPLPADGSTMPSTAPGSGT
Sbjct 481 PNVATPFGLFPEVSPVVIADALAAGTQQGIGDFAYDVSHLELPLPADGSTMPSTAPGSGT 540
Query 541 PVPPLSIDSLIDDLQVANRNLANTISKVAATSYATVLPTADIANAALTIVPSYNIHLFLE 600
PVPPLSIDSLIDDLQVANRNLANTISKVAATSYATVLPTADIANAALTIVPSYNIHLFLE
Sbjct 541 PVPPLSIDSLIDDLQVANRNLANTISKVAATSYATVLPTADIANAALTIVPSYNIHLFLE 600
Query 601 GIQQALKGDPMGLVNAVGYPLAADVALFTAAGGLQLLIIISAGRTIANDISAIVP 655
GIQQALKGDPMGLVNAVGYPLAADVALFTAAGGLQLLIIISAGRTIANDISAIVP
Sbjct 601 GIQQALKGDPMGLVNAVGYPLAADVALFTAAGGLQLLIIISAGRTIANDISAIVP 655
>gi|31792988|ref|NP_855481.1| PPE family protein [Mycobacterium bovis AF2122/97]
gi|31618579|emb|CAD94531.1| PPE FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
Length=655
Score = 1280 bits (3311), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 652/655 (99%), Positives = 652/655 (99%), Gaps = 0/655 (0%)
Query 1 MLPNFAVLPPEVNSARVFAGAGSAPMLAAAAAWDDLASELHCAAMSFGSVTSGLVVGWWQ 60
MLPNFAVLPPEVNSARVFAGAGSAPMLAAAAAWDDLASELHCAAMSFGSVTSGLVVGWWQ
Sbjct 1 MLPNFAVLPPEVNSARVFAGAGSAPMLAAAAAWDDLASELHCAAMSFGSVTSGLVVGWWQ 60
Query 61 GSASAAMVDAAASYIGWLSTSAAHAEGAAGLARAAVSVFEEALAATVHPAMVAANRAQVA 120
GSASAAMVDAAASYIGWLSTSAAHAEGAAGLARAAVSVFEEALAATVHPAMVAANRAQVA
Sbjct 61 GSASAAMVDAAASYIGWLSTSAAHAEGAAGLARAAVSVFEEALAATVHPAMVAANRAQVA 120
Query 121 SLVASNLFGQNAPAIAALESLYECMWAQDAAAMAGYYVGASAVATQLASWLQRLQSIPGA 180
SLVASNLFGQNAPAIAALESLYE MWAQDAAAMAGYYVGASAVATQLASWLQRLQSIPGA
Sbjct 121 SLVASNLFGQNAPAIAALESLYEWMWAQDAAAMAGYYVGASAVATQLASWLQRLQSIPGA 180
Query 181 ASLDARLPSSAEAPMGVVRAVNSAIAANAAAAQTVGLVMGGSGTPIPSARYVELANALYM 240
ASLDARLPSSAEAPMGVVRAVNSAIAANAAAAQTVGLVMGGSGTPIPSARYVELANALYM
Sbjct 181 ASLDARLPSSAEAPMGVVRAVNSAIAANAAAAQTVGLVMGGSGTPIPSARYVELANALYM 240
Query 241 SGSVPGVIAQALFTPQGLYPVVVIKNLTFDSSVAQGAVILESAIRQQIAAGNNVTVFGYS 300
SGSVPGVIAQAL TPQGLYPVVVIKNLTFDSSVAQGAVILESAIRQQIAAGNNVTVFGYS
Sbjct 241 SGSVPGVIAQALVTPQGLYPVVVIKNLTFDSSVAQGAVILESAIRQQIAAGNNVTVFGYS 300
Query 301 QSATISSLVMANLAASADPPSPDELSFTLIGNPNNPNGGVATRFPGISFPSLGVTATGAT 360
QSATISSLVMANLAASADPPSPDELSFTLIGNPNNPNGGVATRFPGISFPSLGVTATGAT
Sbjct 301 QSATISSLVMANLAASADPPSPDELSFTLIGNPNNPNGGVATRFPGISFPSLGVTATGAT 360
Query 361 PHNLYPTKIYTIEYDGVADFPRYPLNFVSTLNAIAGTYYVHSNYFILTPEQIDAAVPLTN 420
PHNLYPTKIYTIEYDGVADFPRYPLNFVSTLNAIAGTYYVHSNYFILTPEQIDAAVPLTN
Sbjct 361 PHNLYPTKIYTIEYDGVADFPRYPLNFVSTLNAIAGTYYVHSNYFILTPEQIDAAVPLTN 420
Query 421 TVGPTMTQYYIIRTENLPLLEPLRSVPIVGNPLANLVQPNLKVIVNLGYGDPAYGYSTSP 480
TVGPTMTQYYIIRTENLPLLEPLRSVPIVGNPLANLVQPNLKVIVNLGYGDPAYGYSTSP
Sbjct 421 TVGPTMTQYYIIRTENLPLLEPLRSVPIVGNPLANLVQPNLKVIVNLGYGDPAYGYSTSP 480
Query 481 PNVATPFGLFPEVSPVVIADALVAGTQQGIGDFAYDVSHLELPLPADGSTMPSTAPGSGT 540
PNVATPFGLFPEVSPVVIADAL AGTQQGIGDFAYDVSHLELPLPADGSTMPSTAPGSGT
Sbjct 481 PNVATPFGLFPEVSPVVIADALAAGTQQGIGDFAYDVSHLELPLPADGSTMPSTAPGSGT 540
Query 541 PVPPLSIDSLIDDLQVANRNLANTISKVAATSYATVLPTADIANAALTIVPSYNIHLFLE 600
PVPPLSIDSLIDDLQVANRNLANTISKVAATSYATVLPTADIANAALTIVPSYNIHLFLE
Sbjct 541 PVPPLSIDSLIDDLQVANRNLANTISKVAATSYATVLPTADIANAALTIVPSYNIHLFLE 600
Query 601 GIQQALKGDPMGLVNAVGYPLAADVALFTAAGGLQLLIIISAGRTIANDISAIVP 655
GIQQALKGDPMGLVNAVGYPLAADVALFTAAGGLQLLIIISAGRTIANDISAIVP
Sbjct 601 GIQQALKGDPMGLVNAVGYPLAADVALFTAAGGLQLLIIISAGRTIANDISAIVP 655
>gi|308231943|ref|ZP_07663959.1| PPE family protein [Mycobacterium tuberculosis SUMu001]
gi|308215534|gb|EFO74933.1| PPE family protein [Mycobacterium tuberculosis SUMu001]
Length=611
Score = 1133 bits (2931), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 573/575 (99%), Positives = 573/575 (99%), Gaps = 0/575 (0%)
Query 26 MLAAAAAWDDLASELHCAAMSFGSVTSGLVVGWWQGSASAAMVDAAASYIGWLSTSAAHA 85
MLAAAAAWDDLASELHCAAMSFGSVTSGLVVGWWQGSASAAMVDAAASYIGWLSTSAAHA
Sbjct 1 MLAAAAAWDDLASELHCAAMSFGSVTSGLVVGWWQGSASAAMVDAAASYIGWLSTSAAHA 60
Query 86 EGAAGLARAAVSVFEEALAATVHPAMVAANRAQVASLVASNLFGQNAPAIAALESLYECM 145
EGAAGLARAAVSVFEEALAATVHPAMVAANRAQVASLVASNLFGQNAPAIAALESLYECM
Sbjct 61 EGAAGLARAAVSVFEEALAATVHPAMVAANRAQVASLVASNLFGQNAPAIAALESLYECM 120
Query 146 WAQDAAAMAGYYVGASAVATQLASWLQRLQSIPGAASLDARLPSSAEAPMGVVRAVNSAI 205
WAQDAAAMAGYYVGASAVATQLASWLQRLQSIPGAASLDARLPSSAEAPMGVVRAVNSAI
Sbjct 121 WAQDAAAMAGYYVGASAVATQLASWLQRLQSIPGAASLDARLPSSAEAPMGVVRAVNSAI 180
Query 206 AANAAAAQTVGLVMGGSGTPIPSARYVELANALYMSGSVPGVIAQALFTPQGLYPVVVIK 265
AANAAAAQTVGLVMGGSGTPIPSARYVELANALYMSGSVPGVIAQALFTPQGLYPVVVIK
Sbjct 181 AANAAAAQTVGLVMGGSGTPIPSARYVELANALYMSGSVPGVIAQALFTPQGLYPVVVIK 240
Query 266 NLTFDSSVAQGAVILESAIRQQIAAGNNVTVFGYSQSATISSLVMANLAASADPPSPDEL 325
NLTFDSSVAQGAVILESAIRQQIAAGNNVTVFGYSQSATISSLVMANLAASADPPSPDEL
Sbjct 241 NLTFDSSVAQGAVILESAIRQQIAAGNNVTVFGYSQSATISSLVMANLAASADPPSPDEL 300
Query 326 SFTLIGNPNNPNGGVATRFPGISFPSLGVTATGATPHNLYPTKIYTIEYDGVADFPRYPL 385
SFTLIGNPNNPNGGVATRFPGISFPSLGVTATGATPHNLYPTKIYTIEYDGVADFPRYPL
Sbjct 301 SFTLIGNPNNPNGGVATRFPGISFPSLGVTATGATPHNLYPTKIYTIEYDGVADFPRYPL 360
Query 386 NFVSTLNAIAGTYYVHSNYFILTPEQIDAAVPLTNTVGPTMTQYYIIRTENLPLLEPLRS 445
NFVSTLNAIAGTYYVHSNYFILTPEQIDAAVPLTNTVGPTMTQYYIIRTENLPLLEPLRS
Sbjct 361 NFVSTLNAIAGTYYVHSNYFILTPEQIDAAVPLTNTVGPTMTQYYIIRTENLPLLEPLRS 420
Query 446 VPIVGNPLANLVQPNLKVIVNLGYGDPAYGYSTSPPNVATPFGLFPEVSPVVIADALVAG 505
VPIVGNPLANLVQPNLKVIVNLGYGDPAYGYSTSPPNVATPFGLFPEVSPVVIADALVAG
Sbjct 421 VPIVGNPLANLVQPNLKVIVNLGYGDPAYGYSTSPPNVATPFGLFPEVSPVVIADALVAG 480
Query 506 TQQGIGDFAYDVSHLELPLPADGSTMPSTAPGSGTPVPPLSIDSLIDDLQVANRNLANTI 565
TQQGIGDFAYDVSHLELPLPADGSTMPSTAPGSGTPVPPLSIDSLIDDLQVANRNLANTI
Sbjct 481 TQQGIGDFAYDVSHLELPLPADGSTMPSTAPGSGTPVPPLSIDSLIDDLQVANRNLANTI 540
Query 566 SKVAATSYATVLPTADIANAALTIVPSYNIHLFLE 600
SKVAATSYATVLPTADIANAALTIVPSYNIHLF
Sbjct 541 SKVAATSYATVLPTADIANAALTIVPSYNIHLFWR 575
>gi|289569870|ref|ZP_06450097.1| PPE family protein [Mycobacterium tuberculosis T17]
gi|289543624|gb|EFD47272.1| PPE family protein [Mycobacterium tuberculosis T17]
Length=558
Score = 1090 bits (2820), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 555/558 (99%), Positives = 556/558 (99%), Gaps = 0/558 (0%)
Query 98 VFEEALAATVHPAMVAANRAQVASLVASNLFGQNAPAIAALESLYECMWAQDAAAMAGYY 157
+FEEALAATVHPAMVAANRAQVASLVASNLFGQNAPAIAALESLYE MWAQDAAAMAGYY
Sbjct 1 MFEEALAATVHPAMVAANRAQVASLVASNLFGQNAPAIAALESLYEWMWAQDAAAMAGYY 60
Query 158 VGASAVATQLASWLQRLQSIPGAASLDARLPSSAEAPMGVVRAVNSAIAANAAAAQTVGL 217
VGASAVATQLASWLQRLQSIPGAASLDARLPSSAEAPMGVVRAVNSAIAANAAAAQTVGL
Sbjct 61 VGASAVATQLASWLQRLQSIPGAASLDARLPSSAEAPMGVVRAVNSAIAANAAAAQTVGL 120
Query 218 VMGGSGTPIPSARYVELANALYMSGSVPGVIAQALFTPQGLYPVVVIKNLTFDSSVAQGA 277
VMGGSGTPIPSARYVELANALYMSGSVPGVIAQALFTPQGLYPVVVIKNLTFDSSVAQGA
Sbjct 121 VMGGSGTPIPSARYVELANALYMSGSVPGVIAQALFTPQGLYPVVVIKNLTFDSSVAQGA 180
Query 278 VILESAIRQQIAAGNNVTVFGYSQSATISSLVMANLAASADPPSPDELSFTLIGNPNNPN 337
VILESAIRQQIAAGNNVTVFGYSQSATISSLVMANLAASADPPSPDELSFTLIGNPNNPN
Sbjct 181 VILESAIRQQIAAGNNVTVFGYSQSATISSLVMANLAASADPPSPDELSFTLIGNPNNPN 240
Query 338 GGVATRFPGISFPSLGVTATGATPHNLYPTKIYTIEYDGVADFPRYPLNFVSTLNAIAGT 397
GGVATRFPGISFPSLGVTATGATPHNLYPTKIYTIEYDGVADFPRYPLNFVSTLNAIAGT
Sbjct 241 GGVATRFPGISFPSLGVTATGATPHNLYPTKIYTIEYDGVADFPRYPLNFVSTLNAIAGT 300
Query 398 YYVHSNYFILTPEQIDAAVPLTNTVGPTMTQYYIIRTENLPLLEPLRSVPIVGNPLANLV 457
YYVHSNYFILTPEQIDAAVPLTNTVGPTMTQYYIIRTENLPLLEPLRSVPIVGNPLANLV
Sbjct 301 YYVHSNYFILTPEQIDAAVPLTNTVGPTMTQYYIIRTENLPLLEPLRSVPIVGNPLANLV 360
Query 458 QPNLKVIVNLGYGDPAYGYSTSPPNVATPFGLFPEVSPVVIADALVAGTQQGIGDFAYDV 517
QPNLKVIVNLGYGDPAYGYSTSPPNVATPF LFPEVSPVVIADALVAGTQQGIGDFAYDV
Sbjct 361 QPNLKVIVNLGYGDPAYGYSTSPPNVATPFRLFPEVSPVVIADALVAGTQQGIGDFAYDV 420
Query 518 SHLELPLPADGSTMPSTAPGSGTPVPPLSIDSLIDDLQVANRNLANTISKVAATSYATVL 577
SHLELPLPADGSTMPSTAPGSGTPVPPLSIDSLIDDLQVANRNLANTISKVAATSYATVL
Sbjct 421 SHLELPLPADGSTMPSTAPGSGTPVPPLSIDSLIDDLQVANRNLANTISKVAATSYATVL 480
Query 578 PTADIANAALTIVPSYNIHLFLEGIQQALKGDPMGLVNAVGYPLAADVALFTAAGGLQLL 637
PTADIANAALTIVPSYNIHLFLEGIQQALKGDPMGLVNAVGYPLAADVALFTAAGGLQLL
Sbjct 481 PTADIANAALTIVPSYNIHLFLEGIQQALKGDPMGLVNAVGYPLAADVALFTAAGGLQLL 540
Query 638 IIISAGRTIANDISAIVP 655
IIISAGRTIANDISAIVP
Sbjct 541 IIISAGRTIANDISAIVP 558
>gi|307084416|ref|ZP_07493529.1| PE-PPE domain protein [Mycobacterium tuberculosis SUMu012]
gi|308365984|gb|EFP54835.1| PE-PPE domain protein [Mycobacterium tuberculosis SUMu012]
Length=542
Score = 1068 bits (2763), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 542/542 (100%), Positives = 542/542 (100%), Gaps = 0/542 (0%)
Query 114 ANRAQVASLVASNLFGQNAPAIAALESLYECMWAQDAAAMAGYYVGASAVATQLASWLQR 173
ANRAQVASLVASNLFGQNAPAIAALESLYECMWAQDAAAMAGYYVGASAVATQLASWLQR
Sbjct 1 ANRAQVASLVASNLFGQNAPAIAALESLYECMWAQDAAAMAGYYVGASAVATQLASWLQR 60
Query 174 LQSIPGAASLDARLPSSAEAPMGVVRAVNSAIAANAAAAQTVGLVMGGSGTPIPSARYVE 233
LQSIPGAASLDARLPSSAEAPMGVVRAVNSAIAANAAAAQTVGLVMGGSGTPIPSARYVE
Sbjct 61 LQSIPGAASLDARLPSSAEAPMGVVRAVNSAIAANAAAAQTVGLVMGGSGTPIPSARYVE 120
Query 234 LANALYMSGSVPGVIAQALFTPQGLYPVVVIKNLTFDSSVAQGAVILESAIRQQIAAGNN 293
LANALYMSGSVPGVIAQALFTPQGLYPVVVIKNLTFDSSVAQGAVILESAIRQQIAAGNN
Sbjct 121 LANALYMSGSVPGVIAQALFTPQGLYPVVVIKNLTFDSSVAQGAVILESAIRQQIAAGNN 180
Query 294 VTVFGYSQSATISSLVMANLAASADPPSPDELSFTLIGNPNNPNGGVATRFPGISFPSLG 353
VTVFGYSQSATISSLVMANLAASADPPSPDELSFTLIGNPNNPNGGVATRFPGISFPSLG
Sbjct 181 VTVFGYSQSATISSLVMANLAASADPPSPDELSFTLIGNPNNPNGGVATRFPGISFPSLG 240
Query 354 VTATGATPHNLYPTKIYTIEYDGVADFPRYPLNFVSTLNAIAGTYYVHSNYFILTPEQID 413
VTATGATPHNLYPTKIYTIEYDGVADFPRYPLNFVSTLNAIAGTYYVHSNYFILTPEQID
Sbjct 241 VTATGATPHNLYPTKIYTIEYDGVADFPRYPLNFVSTLNAIAGTYYVHSNYFILTPEQID 300
Query 414 AAVPLTNTVGPTMTQYYIIRTENLPLLEPLRSVPIVGNPLANLVQPNLKVIVNLGYGDPA 473
AAVPLTNTVGPTMTQYYIIRTENLPLLEPLRSVPIVGNPLANLVQPNLKVIVNLGYGDPA
Sbjct 301 AAVPLTNTVGPTMTQYYIIRTENLPLLEPLRSVPIVGNPLANLVQPNLKVIVNLGYGDPA 360
Query 474 YGYSTSPPNVATPFGLFPEVSPVVIADALVAGTQQGIGDFAYDVSHLELPLPADGSTMPS 533
YGYSTSPPNVATPFGLFPEVSPVVIADALVAGTQQGIGDFAYDVSHLELPLPADGSTMPS
Sbjct 361 YGYSTSPPNVATPFGLFPEVSPVVIADALVAGTQQGIGDFAYDVSHLELPLPADGSTMPS 420
Query 534 TAPGSGTPVPPLSIDSLIDDLQVANRNLANTISKVAATSYATVLPTADIANAALTIVPSY 593
TAPGSGTPVPPLSIDSLIDDLQVANRNLANTISKVAATSYATVLPTADIANAALTIVPSY
Sbjct 421 TAPGSGTPVPPLSIDSLIDDLQVANRNLANTISKVAATSYATVLPTADIANAALTIVPSY 480
Query 594 NIHLFLEGIQQALKGDPMGLVNAVGYPLAADVALFTAAGGLQLLIIISAGRTIANDISAI 653
NIHLFLEGIQQALKGDPMGLVNAVGYPLAADVALFTAAGGLQLLIIISAGRTIANDISAI
Sbjct 481 NIHLFLEGIQQALKGDPMGLVNAVGYPLAADVALFTAAGGLQLLIIISAGRTIANDISAI 540
Query 654 VP 655
VP
Sbjct 541 VP 542
>gi|183981048|ref|YP_001849339.1| PPE family protein [Mycobacterium marinum M]
gi|183174374|gb|ACC39484.1| PPE family protein [Mycobacterium marinum M]
Length=661
Score = 840 bits (2171), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/655 (71%), Positives = 534/655 (82%), Gaps = 4/655 (0%)
Query 1 MLPNFAVLPPEVNSARVFAGAGSAPMLAAAAAWDDLASELHCAAMSFGSVTSGLVVGWWQ 60
ML +F+VLPPE+NSAR+F GAGSAP LAAA AWD L++EL AA SFGSVTS L G WQ
Sbjct 3 MLASFSVLPPEINSARLFGGAGSAPTLAAATAWDGLSAELSGAAGSFGSVTSELAAGVWQ 62
Query 61 GSASAAMVDAAASYIGWLSTSAAHAEGAAGLARAAVSVFEEALAATVHPAMVAANRAQVA 120
G ASAAM AA Y+GWL TSA HA GAA ARAA + FE ALAATVHP VAANRAQ+A
Sbjct 63 GPASAAMTVAAGRYVGWLRTSALHAAGAAAAARAAAAEFEAALAATVHPVAVAANRAQLA 122
Query 121 SLVASNLFGQNAPAIAALESLYECMWAQDAAAMAGYYVGASAVATQLASWLQRLQSIPGA 180
SLV +NLFGQNAPAIAA ES YE MWAQD +AMAGYY GA+AVA QLA W Q+L +I GA
Sbjct 123 SLVMTNLFGQNAPAIAAAESSYEQMWAQDVSAMAGYYGGAAAVAAQLAPWSQQLGTIVGA 182
Query 181 ASLDARLPSSAEAPMGVVRAVNSAIAANAAAAQTVGLVMGGSGTPIPSARYVELANALYM 240
A S + + A S+I N AAAQT+ VMGGSG P+PS RYV+LAN+LY+
Sbjct 183 VGGSAGAGLSRASGLSATAANTSSIGTNVAAAQTIAEVMGGSGIPMPSRRYVQLANSLYI 242
Query 241 SGSVPGVIAQALFTPQGLYPVVVIKNLTFDSSVAQGAVILESAIRQQIAAGNNVTVFGYS 300
SV G +AQALFTP+GLYPV +KNLTFD+SVA+G VILESAIR+QI AGNNVTVFGYS
Sbjct 243 GRSVGGAVAQALFTPEGLYPVTGVKNLTFDTSVARGVVILESAIREQITAGNNVTVFGYS 302
Query 301 QSATISSLVMANLAASADPPSPDELSFTLIGNPNNPNGGVATRFPGISFPSLGVTATGAT 360
QSATISSL M LAAS +PP+PD+LSFTL+G+PNNPNGGVATRFPG+S PSLG+TA+GAT
Sbjct 303 QSATISSLTMTKLAASINPPTPDQLSFTLVGDPNNPNGGVATRFPGLSLPSLGITASGAT 362
Query 361 PHNLYPTKIYTIEYDGVADFPRYPLNFVSTLNAIAGTYYVHSNYFILTPEQIDAAVPLTN 420
P NLYPT+IYT+EYDGVADFPRYPLN VSTLNA+AG YYVH++Y LTP QIDAAV LTN
Sbjct 363 PDNLYPTRIYTLEYDGVADFPRYPLNLVSTLNALAGAYYVHTDYLFLTPAQIDAAVHLTN 422
Query 421 TVGPTMTQYYIIRTENLPLLEPLRSVPIVGNPLANLVQPNLKVIVNLGYGDPAYGYSTSP 480
TVGPTMT YY+IRTE+LPLLEPLR++P++G+PLA+LVQPNLKVIVNLGYGDPAYGYSTSP
Sbjct 423 TVGPTMTDYYVIRTEDLPLLEPLRALPVLGDPLADLVQPNLKVIVNLGYGDPAYGYSTSP 482
Query 481 PNVATPFGLFPEVSPVVIADALVAGTQQGIGDFAYDVSHLELPLPADGSTM----PSTAP 536
PNVATPFGL+PEVSP+ IADAL AGTQQGI DF Y +SHL+LP +GS+ P AP
Sbjct 483 PNVATPFGLWPEVSPLTIADALAAGTQQGIHDFGYHISHLDLPQITNGSSSPVGNPQAAP 542
Query 537 GSGTPVPPLSIDSLIDDLQVANRNLANTISKVAATSYATVLPTADIANAALTIVPSYNIH 596
+G P +SI+++IDDLQ AN +ANTI++V A SYA +LPTADIANAA+T VPSYNI+
Sbjct 543 TTGPAAPMVSINTIIDDLQAANSQVANTITEVGAASYAALLPTADIANAAITSVPSYNIN 602
Query 597 LFLEGIQQALKGDPMGLVNAVGYPLAADVALFTAAGGLQLLIIISAGRTIANDIS 651
LFL+GIQQ GDPMG VNAVGYPLAADVAL T AG LQ ++++AG+ IA+ I+
Sbjct 603 LFLDGIQQVANGDPMGFVNAVGYPLAADVALITVAGLLQAFVLVNAGQAIAHAIT 657
>gi|339298363|gb|AEJ50473.1| PPE family protein [Mycobacterium tuberculosis CCDC5180]
Length=362
Score = 639 bits (1649), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/336 (99%), Positives = 333/336 (99%), Gaps = 1/336 (0%)
Query 1 MLPNFAVLPPEVNSARVFAGAGSAPMLAAAAAWDDLASELHCAAMSFGSVTSGLVVGWWQ 60
MLPNFAVLPPEVNSARVFAGAGSAPMLAAAAAWDDLASELHCAAMSFGSVTSGLVVGWWQ
Sbjct 1 MLPNFAVLPPEVNSARVFAGAGSAPMLAAAAAWDDLASELHCAAMSFGSVTSGLVVGWWQ 60
Query 61 GSASAAMVDAAASYIGWLSTSAAHAEGAAGLARAAVSVFEEALAATVHPAMVAANRAQVA 120
GSASAAMVDAAASYIGWLSTSAAHAEGAAGLARAAVSVFEEALAATVHPAMVAANRAQVA
Sbjct 61 GSASAAMVDAAASYIGWLSTSAAHAEGAAGLARAAVSVFEEALAATVHPAMVAANRAQVA 120
Query 121 SLVASNLFGQNAPAIAALESLYECMWAQDAAAMAGYYVGASAVATQLASWLQRLQSIPGA 180
SLVASNLFGQNAPAIAALESLYECMWAQDAAAMAGYYVGASAVATQLASWLQRLQSIPGA
Sbjct 121 SLVASNLFGQNAPAIAALESLYECMWAQDAAAMAGYYVGASAVATQLASWLQRLQSIPGA 180
Query 181 ASLDARLPSSAEAPMGVVRAVNSAIAANAAAAQTVGLVMGGSGTPIPSARYVELANALYM 240
ASLDARLPSSAEAPMGVVRAVNSAIAANAAAAQTVGLVMGGSGTPIPSARYVELANALYM
Sbjct 181 ASLDARLPSSAEAPMGVVRAVNSAIAANAAAAQTVGLVMGGSGTPIPSARYVELANALYM 240
Query 241 SGSVPGVIAQALFTPQGLYPVVVIKNLTFDSSVAQGAVILESAIRQQIAAGNNVTVFGYS 300
SGSVPGVIAQALFTPQGLYPVVVIKNLTFDSSVAQGAVILESAIRQQIAAGNNVTVFGYS
Sbjct 241 SGSVPGVIAQALFTPQGLYPVVVIKNLTFDSSVAQGAVILESAIRQQIAAGNNVTVFGYS 300
Query 301 QSATISSLVMANLAASADPPSPDELSFTLIGNPNNP 336
QSATISSLVMANLAASADPPSPDELSFTLIG N P
Sbjct 301 QSATISSLVMANLAASADPPSPDELSFTLIGM-NRP 335
>gi|183981512|ref|YP_001849803.1| PPE family protein, PPE28 [Mycobacterium marinum M]
gi|183174838|gb|ACC39948.1| PPE family protein, PPE28 [Mycobacterium marinum M]
Length=660
Score = 544 bits (1402), Expect = 2e-152, Method: Compositional matrix adjust.
Identities = 340/657 (52%), Positives = 429/657 (66%), Gaps = 17/657 (2%)
Query 4 NFAVLPPEVNSARVFAGAGSAPMLAAAAAWDDLASELHCAAMSFGSVTSGLVVGWWQGSA 63
NFAVL PE NSAR+ +G G P+LAAAAAWD + EL AA +F S+TS L WQG +
Sbjct 2 NFAVLSPEANSARILSGPGPGPLLAAAAAWDGIGQELAAAASAFSSLTSDLAGAAWQGPS 61
Query 64 SAAMVDAAASYIGWLSTSAAHAEGAAGLARAAVSVFEEALAATVHPAMVAANRAQVASLV 123
+AAM A SY+ WL ++A+ A A A + +VFE A ATV +VAANR+ + S+V
Sbjct 62 AAAMASVATSYVRWLGSAASGAVQTARQAATSAAVFEAARTATVPLELVAANRSALMSMV 121
Query 124 ASNLFGQNAPAIAALESLYECMWAQDAAAMAGYYVGASAVATQLASWLQRLQSIPGAASL 183
A+N+FG NAPAIAA+E+ YE MWAQ+ AM GY+VG S + LA W + L + G +
Sbjct 122 AANVFGLNAPAIAAIEAQYEQMWAQNVGAMFGYHVGVSEALSGLAPWQEVLSGVSGRVAS 181
Query 184 DARLPSSAEAPMGVVRAVNSAIAANAAAAQTVGLVMGGSGTPIPSARYVELANALYMSGS 243
S+A A A+ +A +A AAA V LV+GGSG PIPS YV+ +++ +
Sbjct 182 ALEGTSAAAAAALGPTALTAAGSALPAAATDVTLVIGGSGFPIPSQSYVDNVVNNFVTPN 241
Query 244 VPGVI---AQALFTPQGLYPVVVIKNLTFDSSVAQGAVILESAIRQQIAAGNNVTVFGYS 300
P A +LFTP Y + IK +T D+S A+G IL++AI+ Q+AAGNNV V GYS
Sbjct 242 FPSFTVSNAISLFTPAESYWITGIKTMTEDASWAEGLTILDTAIKAQLAAGNNVVVQGYS 301
Query 301 QSATISSLVMANLAASADPPSPDELSFTLIGNPNNPNGGVATRFPGISFPSLGVTATGAT 360
Q A I+SL M+NL A+ P +SF+LIGN NPNGG+ RF G+ PSLG T GAT
Sbjct 302 QGAGIASLEMSNLKAAGVPTG--SVSFSLIGNAMNPNGGLYERFAGLVSPSLGKTFWGAT 359
Query 361 PHNLYPTKIYTIEYDGVADFPRYPLNFVSTLNAIAGTYYVHSNYFILTPEQIDAAVPLTN 420
P N Y T +YT+EYDG ADFPRYPLNFVS LNAI G YYVH+ Y LT Q+ A L
Sbjct 360 PDNYYTTDVYTLEYDGFADFPRYPLNFVSDLNAIMGIYYVHTQYPTLTAAQVATAFTLP- 418
Query 421 TVGPTMTQYYIIRTENLPLLEPLRSVPIVGNPLANLVQPNLKVIVNLGYGDPAYGYSTSP 480
T G TMT Y++I TENLPLLEPLR VP +GN LA+LVQP+LKV+VNLGYGDP YGYST P
Sbjct 419 TEGATMTTYHMIPTENLPLLEPLRGVPFIGNTLADLVQPDLKVLVNLGYGDPNYGYSTGP 478
Query 481 PNVATPFGLFPEVSPVVIADALVAGTQQGIGDFAYDVSHLELP-LPADGSTMPSTAPG-- 537
NV TPFGLFP+V+P + DALVAGTQQGI D A D+ +LP LP + S A G
Sbjct 479 ANVPTPFGLFPDVAPATVFDALVAGTQQGISDAAADIGAWQLPSLPDISLSGISNALGSD 538
Query 538 -----SGTPVPPLSIDSL---IDDLQVANRNLANTISKVAATSYATVLPTADIANAALTI 589
S +P LS+ ++ I +Q A ++ANTIS A T+YAT+LPTAD+ NA +T
Sbjct 539 PWSALSNATLPTLSVSTIENAIKGVQTATTDIANTISFDATTAYATLLPTADVVNAMVTT 598
Query 590 VPSYNIHLFLEGIQQALKGDPMGLVNAVGYPLAADVALFTAAGGLQLLIIISAGRTI 646
+P+YN+ LFL+GI Q L GDP GL+ A+G P+AAD AL T G L + A I
Sbjct 599 LPAYNLKLFLDGILQVLDGDPAGLIYALGAPIAADTALVTLLAGFNLYAYLYAFNKI 655
>gi|118617931|ref|YP_906263.1| PPE family protein [Mycobacterium ulcerans Agy99]
gi|118570041|gb|ABL04792.1| PPE family protein [Mycobacterium ulcerans Agy99]
Length=637
Score = 530 bits (1364), Expect = 5e-148, Method: Compositional matrix adjust.
Identities = 325/635 (52%), Positives = 410/635 (65%), Gaps = 17/635 (2%)
Query 26 MLAAAAAWDDLASELHCAAMSFGSVTSGLVVGWWQGSASAAMVDAAASYIGWLSTSAAHA 85
MLAAAAAWD EL AA +F S+TS L WQG ++AAM A SY+ WL ++A+ A
Sbjct 1 MLAAAAAWDGTGQELAAAASAFSSLTSDLAGAAWQGPSAAAMASVATSYVRWLGSAASGA 60
Query 86 EGAAGLARAAVSVFEEALAATVHPAMVAANRAQVASLVASNLFGQNAPAIAALESLYECM 145
A + +VFE A ATV +VAANR+ + S+VA+N+FG NAPAIAA+E+ YE M
Sbjct 61 VQTARQVATSAAVFEAARTATVPLELVAANRSALMSMVAANVFGLNAPAIAAIEAQYEQM 120
Query 146 WAQDAAAMAGYYVGASAVATQLASWLQRLQSIPGAASLDARLPSSAEAPMGVVRAVNSAI 205
WAQ+ AM GY+VG S + LA W + L + G + S+A A A+ +A
Sbjct 121 WAQNVGAMFGYHVGVSEALSGLAPWQEVLSGVSGRVASALEGTSAAAAAALGPTALTAAG 180
Query 206 AANAAAAQTVGLVMGGSGTPIPSARYVELANALYMSGSVPGVI---AQALFTPQGLYPVV 262
+A AAA V LV+GGSG PIPS YV+ +++ + P A +LFTP Y +
Sbjct 181 SALPAAATDVTLVIGGSGFPIPSQSYVDNVVNNFVTPNFPSFTVSNAISLFTPAESYWIT 240
Query 263 VIKNLTFDSSVAQGAVILESAIRQQIAAGNNVTVFGYSQSATISSLVMANLAASADPPSP 322
IK +T D+S A+G IL++AI+ Q+AAGNNV V GYSQ A I+SL M+NL A+ P
Sbjct 241 GIKTMTEDASWAEGLTILDTAIKAQLAAGNNVVVQGYSQGAGIASLEMSNLKAAGVPTG- 299
Query 323 DELSFTLIGNPNNPNGGVATRFPGISFPSLGVTATGATPHNLYPTKIYTIEYDGVADFPR 382
+SF+LIGN NPNGG+ RF G+ PSLG T GATP N Y T +YT+EYDG ADFPR
Sbjct 300 -SVSFSLIGNAMNPNGGLYERFAGLVSPSLGKTFWGATPDNYYTTDVYTLEYDGFADFPR 358
Query 383 YPLNFVSTLNAIAGTYYVHSNYFILTPEQIDAAVPLTNTVGPTMTQYYIIRTENLPLLEP 442
YP NFVS LNAI G YYVH+ Y LT Q+ A L T G TMT Y++I TENLPLLEP
Sbjct 359 YPPNFVSDLNAIMGIYYVHTQYPTLTAAQVATAFTLP-TEGATMTTYHMIPTENLPLLEP 417
Query 443 LRSVPIVGNPLANLVQPNLKVIVNLGYGDPAYGYSTSPPNVATPFGLFPEVSPVVIADAL 502
LR VP +GN LA+LVQP+LKV+VNLGYGDP YGYST P NV TPFGLFP+V+P + DAL
Sbjct 418 LRGVPFIGNTLADLVQPDLKVLVNLGYGDPNYGYSTGPANVPTPFGLFPDVAPATVFDAL 477
Query 503 VAGTQQGIGDFAYDVSHLELP-LPADGSTMPSTAPG-------SGTPVPPLSIDSL---I 551
VAGTQQGI D A D+ +LP LP + S A G S +P LS+ ++ I
Sbjct 478 VAGTQQGISDAAADIGAWQLPSLPDISLSGISNALGSDPWSALSNATLPTLSVSTIENAI 537
Query 552 DDLQVANRNLANTISKVAATSYATVLPTADIANAALTIVPSYNIHLFLEGIQQALKGDPM 611
+Q A ++ANTIS A T+YAT+LPTAD+ NA +T +P+YN+ LFL+GI Q L GDP
Sbjct 538 KGVQTATTDIANTISFDATTAYATLLPTADVVNAMVTTLPAYNLKLFLDGILQVLDGDPA 597
Query 612 GLVNAVGYPLAADVALFTAAGGLQLLIIISAGRTI 646
GL+ A+G P+AAD AL T G L + A I
Sbjct 598 GLIYALGAPIAADTALVTLLAGFNLYAYLYAFNKI 632
>gi|240168595|ref|ZP_04747254.1| PPE family protein, PPE28 [Mycobacterium kansasii ATCC 12478]
Length=641
Score = 494 bits (1271), Expect = 3e-137, Method: Compositional matrix adjust.
Identities = 318/663 (48%), Positives = 425/663 (65%), Gaps = 35/663 (5%)
Query 4 NFAVLPPEVNSARVFAGAGSAPMLAAAAAWDDLASELHCAAMSFGSVTSGLVVGWWQGSA 63
F LPPEVNSAR+ G G AP+ AAA AW L+ +L +A + SV S + WQG A
Sbjct 2 EFLTLPPEVNSARILRGPGPAPLRAAATAWATLSEDLASSATAVSSVMSEISGSAWQGPA 61
Query 64 SAAMVDAAASYIGWLSTSAAHAEGAAGLARAAVSVFEEALAATVHPAMVAANRAQVASLV 123
+AAM A A Y GWL +A A A A A + +E A ATV M+A NR+++ SLV
Sbjct 62 AAAMAAAVAPYPGWLGAAATRAAAAGRHAATAAAAYETARTATVPLEMLAQNRSRLVSLV 121
Query 124 ASNLFGQNAPAIAALESLYECMWAQDAAAMAGYYVGASAVATQLASWLQRLQSIPGAASL 183
A+++ G NAPAIAA E+ YE +WAQD AMAGYY GASA QL W L
Sbjct 122 AADVLGLNAPAIAATEAHYEQLWAQDVGAMAGYYAGASAAVAQLTPWQTLL--------- 172
Query 184 DARLPSSAEAPMGVVRAVNSAIAANAAAAQT----VGLVMGGSGTPIPSARYVELANALY 239
S+ E+P+G ++A +A++A++ +A T V LV+GGSG PIPS YV A Y
Sbjct 173 -----STLESPVGGMKAAEAAVSASSPSASTAATGVTLVIGGSGYPIPSQSYVNTVVADY 227
Query 240 MSGSVPGVI---AQALFTPQGLYPVVVIKNLTFDSSVAQGAVILESAIRQQIAAGNNVTV 296
++ + PG AQ+L+TP Y + +K LT D+S AQG IL++AI Q+A GNNV V
Sbjct 228 VTPTFPGFTTANAQSLYTPAQSYWITGVKTLTEDASWAQGLTILDNAIHAQLATGNNVAV 287
Query 297 FGYSQSATISSLVMANLAASADPPSPDELSFTLIGNPNNPNGGVATRFPGISFPSLGVTA 356
G+SQ A I+SL MANL A P S +SF+LIG+P NPNGG+ +RF G++ S+G +
Sbjct 288 QGFSQGAGIASLEMANLKAEGVPTS--SVSFSLIGDPMNPNGGLYSRFDGLTLASMGKSF 345
Query 357 TGATPHNLYPTKIYTIEYDGVADFPRYPLNFVSTLNAIAGTYYVHSNYFILTPEQIDAAV 416
G+TP N YPT IYTIEYDG ADFP+YPLN V+ NA+ G YVH Y +LTP Q+ AV
Sbjct 346 PGSTPANDYPTVIYTIEYDGFADFPQYPLNLVADANAMLGALYVHPQYPVLTPAQVVTAV 405
Query 417 PLTNTVGPTMTQYYIIRTENLPLLEPLRSVPIVGNPLANLVQPNLKVIVNLGYGDPAYGY 476
L T GPT T YY+I T+NLPLLEPLR++P+ GN +A+L+QP+LKVIVNLGYG+P YGY
Sbjct 406 QLP-TQGPTTTTYYMIPTQNLPLLEPLRALPL-GNTVADLIQPDLKVIVNLGYGNPDYGY 463
Query 477 STSPPNVATPFGLFPEVSPVVIADALVAGTQQGIGDFAYDVSHLELPLPADGSTMPSTAP 536
ST P NV TPFGLFP+ SP V+ L+ GT+QGIG A D+ P + P+ P
Sbjct 464 STGPANVPTPFGLFPDASPGVVVADLIDGTRQGIGAAAADLGTWHAP-----AGNPAPNP 518
Query 537 GSGTPVPP-----LSIDSLIDDLQVANRNLANTISKVAATSYATVLPTADIANAALTIVP 591
+ + + P +ID +I LQ N NL N ++ +++YAT+LPTAD+ +A L +P
Sbjct 519 FALSDLTPPTVAATTIDGIIQGLQTGNTNLTNAVTSATSSAYATLLPTADMLSAILVSLP 578
Query 592 SYNIHLFLEGIQQALKGDPMGLVNAVGYPLAADVALFTAAGGLQLLIIISAGRTIANDIS 651
SY+++LFL+G++QAL GDP G++NA+GYP+AAD L T A ++IA D +
Sbjct 579 SYDVNLFLDGVRQALDGDPAGIINAIGYPIAADTGLLTFLSFFLAYAYYGAAKSIAGDFA 638
Query 652 AIV 654
+++
Sbjct 639 SLI 641
>gi|240168157|ref|ZP_04746816.1| PE family protein [Mycobacterium kansasii ATCC 12478]
Length=560
Score = 405 bits (1040), Expect = 2e-110, Method: Compositional matrix adjust.
Identities = 238/457 (53%), Positives = 294/457 (65%), Gaps = 36/457 (7%)
Query 201 VNSAIAANAAAAQTVGLVMGGSGTPIPSARYV-ELANALYMSGSVPGVIAQALFTPQGLY 259
V+++I A+ TV L+MGGSG P P YV +L N Y+S AQALFTP+ LY
Sbjct 98 VSASITASPLTGPTVSLIMGGSGNPTPGIDYVNDLLN--YISPQFGATNAQALFTPEQLY 155
Query 260 PVVVIKNLTFDSSVAQGAVILESAIRQQI-AAGNNVTVFGYSQSATISSLVMANLAA--- 315
P+ K+L +SV+QG IL +AI ++ GN+V V GYSQSA I+SL M NLAA
Sbjct 156 PLTGEKSLPLTTSVSQGVQILHNAILSEVNTLGNSVVVGGYSQSAIIASLEMRNLAAMPP 215
Query 316 SADPPSPDELSFTLIGNPNNPNGGVATRFPGISFPSLGVTATGATPHN-LYPTKIYTIEY 374
PP+ D L F L+ NP NPNGG+ +RF G+S PSLGV GATP + +YPT IYT EY
Sbjct 216 GTAPPA-DRLGFVLLANPMNPNGGLLSRFAGLSLPSLGVEFFGATPADTIYPTSIYTHEY 274
Query 375 DGVADFPRYPLNFVSTLNAIAGTYYVHSNYFILTPEQIDAAVPLTNTVGPTM---TQYYI 431
DG ADFPRYPLN VS LNAIAG +VH++ + P+ + + PT T YYI
Sbjct 275 DGFADFPRYPLNIVSDLNAIAGIAFVHTDTPEINPQTLPPGDLIKLPTEPTYNGNTSYYI 334
Query 432 IRTENLPLLEPLRSVPIVGNPLANLVQPNLKVIVNLGYGDPAYGYSTSPPNVATPFGLFP 491
IRT +LPLL PLR +P++GNPLA+LV+PNL IVNLGYGDP YGYST+P NV TPFGLFP
Sbjct 335 IRTHHLPLLTPLRFIPVLGNPLADLVEPNLTTIVNLGYGDPRYGYSTAPANVPTPFGLFP 394
Query 492 EVSPVVIADALVAGTQQGIGDFAYDVSHLELPLPADGSTMPSTAPGSGTP---------- 541
EV P V+A LV GTQQG D+ G P T P G+
Sbjct 395 EVDPAVVAGELVTGTQQGFNAAVNDIL-------GQGPQGPPTVPSLGSSRLVDLLTSIA 447
Query 542 -------VPPLSIDSLIDDLQVANRNLANTISKVAATSYATVLPTADIANAALTIVPSYN 594
PP SID LI DLQ AN L+NTIS +++Y ++LPTADI NA LT VPSYN
Sbjct 448 LPPPEILAPPTSIDGLITDLQAANTYLSNTISGGLSSAYESLLPTADILNAGLTEVPSYN 507
Query 595 IHLFLEGIQQALKGDPMGLVNAVGYPLAADVALFTAA 631
++LFL+GI+QA+ GDP+GL+NA+GYP+AADV L A
Sbjct 508 LNLFLDGIEQAVNGDPVGLINAIGYPIAADVGLLALA 544
>gi|240173260|ref|ZP_04751918.1| PPE family protein [Mycobacterium kansasii ATCC 12478]
Length=494
Score = 399 bits (1026), Expect = 7e-109, Method: Compositional matrix adjust.
Identities = 258/517 (50%), Positives = 327/517 (64%), Gaps = 38/517 (7%)
Query 4 NFAVLPPEVNSARVFAGAGSAPMLAAAAAWDDLASELHCAAMSFGSVTSGLVVGWWQGSA 63
NF VLPPE+NSAR++AGAG APMLAAAAAWD LA++L +A+SF SV S LV W QG+A
Sbjct 2 NFTVLPPEINSARMYAGAGPAPMLAAAAAWDGLAADLQASAVSFESVASCLVTSW-QGAA 60
Query 64 SAAMVDAAASYIGWLSTSAAHAEGAAGLARAAVSVFEEALAATVHPAMVAANRAQVASLV 123
S AM AAA Y+ WLS +A HAE AG AR A S FE AL ATVHPAMV NR Q+ SL+
Sbjct 61 STAMTAAAAPYLAWLSAAAQHAEQTAGQARMAASTFEAALTATVHPAMVGVNRTQLVSLI 120
Query 124 ASNLFGQNAPAIAALESLYECMWAQDAAAMAGYYVGASAVATQLASWLQRLQSIPGAASL 183
ASNL GQNAPAIAA E+ YE MWAQ+ AAM+GYY ASAVA++L W Q
Sbjct 121 ASNLLGQNAPAIAATEAEYEQMWAQNVAAMSGYYSNASAVASRLTPWQQ----------- 169
Query 184 DARLPSSAEAPMGVVRAVNSAIAANAAAAQTVGLVMGGSG-TPIPSARYVELANALYMSG 242
++ +++ A AA A LVMG + P PS YV + L+++
Sbjct 170 -------------LMDGLSTTGAGPAAMAPGTALVMGTAFLQPTPS--YVSRIDQLFIAP 214
Query 243 SVPGVIAQALFTPQGLYPVVVIKNLTFDSSVAQGAVILESAIRQQIAAGNNVTVFGYSQS 302
PG +AQ L+TP+ +P+ + +LT S+ Q A +L AI Q GN VFGYSQS
Sbjct 215 FHPGYLAQGLYTPEQYWPLTGLTSLTVGQSMVQSAKVLNDAIMTQ--NGNPTLVFGYSQS 272
Query 303 ATISSLVMANLAA--SADPPSPDELSFTLIGNPNNPNGGVATRFPGISFPSLGVTATGAT 360
A+++SL M +L + P+ D+LSF L NPN PNGG RF G+ P L + GAT
Sbjct 273 ASVASLEMQHLLTLPAGQRPTADQLSFVLAANPNRPNGGFLERFHGLYIPILDLPFFGAT 332
Query 361 PHNLYPTKIYTIEYDGVADFPRYPLNFVSTLNAIAGTYYVHSNYFILTPEQIDAAVPLTN 420
P N YPT Y I+YD ADFP+YPLN ++ NA+AG +Y+HS+Y LTP QI V
Sbjct 333 PANAYPTTDYAIQYDFQADFPQYPLNLLADANAVAGQFYIHSSYPDLTPAQIATGVVQPV 392
Query 421 TVGPTMTQYYIIRTENLPLLEPLRSVPIVGNPLANLVQPNLKVIVNLGYGDPAYGYSTSP 480
+ TMT+Y +I T +LPLL PLR+VPI+GNPLA+LVQP+L+V+V LGY AY
Sbjct 393 SPADTMTKYILIPTHDLPLLNPLRAVPILGNPLADLVQPDLRVLVELGYDRTAYQ----- 447
Query 481 PNVATPFGLFPEVSPVVIADALVAGTQQGIGDFAYDV 517
+V TP GLFP+ P+ +A LV G QG+ D D+
Sbjct 448 -DVPTPAGLFPQFDPLTVAGQLVEGAGQGLHDAMADL 483
>gi|183980402|ref|YP_001848693.1| PE family protein [Mycobacterium marinum M]
gi|183173728|gb|ACC38838.1| PE family protein [Mycobacterium marinum M]
Length=582
Score = 399 bits (1025), Expect = 9e-109, Method: Compositional matrix adjust.
Identities = 226/431 (53%), Positives = 284/431 (66%), Gaps = 34/431 (7%)
Query 214 TVGLVMGGSGTPIPSARYV-ELANALYMSGSVPGVIAQALFTPQGLYPVVVIKNLTFDSS 272
TV LVMGGSG P+P Y+ + N Y++ +QALFTP+ LYP+ K+L S
Sbjct 137 TVSLVMGGSGNPLPGPDYLADFFN--YITPQFGVTTSQALFTPEQLYPLTGEKSLPLAIS 194
Query 273 VAQGAVILESAIRQQIAAGNNVTVFGYSQSATISSLVMANLAA--SADPPSPDELSFTLI 330
V+QG IL +AI QIA GN+V V GYSQSA I+SL M NLAA P+ D+L F L+
Sbjct 195 VSQGVQILHNAILGQIAEGNSVVVGGYSQSAIIASLEMQNLAAMPPGTAPTADQLGFLLL 254
Query 331 GNPNNPNGGVATRFPGISFPSLGVTATGATPHN-LYPTKIYTIEYDGVADFPRYPLNFVS 389
NP NPNGG+ +RF G++ PSLGV G+TP + +YPT IYT EYDG ADFPRYPLN VS
Sbjct 255 ANPMNPNGGLLSRFAGLTLPSLGVDFYGSTPADTIYPTSIYTHEYDGFADFPRYPLNIVS 314
Query 390 TLNAIAGTYYVHSNYFILTPE--------QIDAAVPLTNTVGPTMTQYYIIRTENLPLLE 441
LNAIAG +VH++ + PE ++D + T T YY+I TE LPLLE
Sbjct 315 DLNAIAGIAFVHTDTPTINPETLPPGDLIKLDTSADYTGN-----TSYYLIHTERLPLLE 369
Query 442 PLRSVPIVGNPLANLVQPNLKVIVNLGYGDPAYGYSTSPPNVATPFGLFPEVSPVVIADA 501
PLR +P+VGNPLA+L+QP+L IVNLGYGDP YGYST+P N+ TPFGLFPEV P V+A
Sbjct 370 PLRFIPVVGNPLADLLQPDLTTIVNLGYGDPRYGYSTAPANIETPFGLFPEVDPKVVAQQ 429
Query 502 LVAGTQQGIGDFAYDVS-----------HLELPLPADGSTMPSTAPGSGTPVPPLSIDSL 550
LV GTQQG A+D+ L++P P +P A + V P SID
Sbjct 430 LVIGTQQGFHSAAHDLVAPQPSPPTPRLFLDIPNPLASIALPPPA----SLVAPTSIDGF 485
Query 551 IDDLQVANRNLANTISKVAATSYATVLPTADIANAALTIVPSYNIHLFLEGIQQALKGDP 610
I+ LQ AN + N + V ATSYA +LPTADI NA LT VPSYN++LFL+GI+QA+ GDP
Sbjct 486 INALQTANTTVTNAFTDVLATSYAKLLPTADIINAGLTTVPSYNLNLFLDGIEQAVDGDP 545
Query 611 MGLVNAVGYPL 621
+GL+NA+GYP+
Sbjct 546 IGLINAIGYPI 556
>gi|240173252|ref|ZP_04751910.1| PPE family protein [Mycobacterium kansasii ATCC 12478]
Length=584
Score = 399 bits (1024), Expect = 1e-108, Method: Compositional matrix adjust.
Identities = 258/560 (47%), Positives = 332/560 (60%), Gaps = 59/560 (10%)
Query 111 MVAANRAQVASLVAS--NLFGQNAPAIAALESLYECMWAQDAAAMAGYYVGAS-----AV 163
++AA R +V+ L+AS +GQ A+ + +AQ A A Y A V
Sbjct 39 VIAAARDEVSELIASLFRAYGQECQAVMTQAGAFHDAFAQSLATAATSYAQAEAANAATV 98
Query 164 ATQLASWLQRLQS-IPGAASLDARLPSSAEAPMGVVRAVNSAIAANAAAAQTVGLVMGGS 222
LA+ +++ + GAA L + +PS+A AVN+ LVMGGS
Sbjct 99 TEALAAISSPVRAMLGGAAPLTSAVPSAA--------AVNT-------------LVMGGS 137
Query 223 GTPIPSARYVELANALYMSGSVP--GVIAQALFTPQGLYPVVVIKNLTFDSSVAQGAVIL 280
G PIPS +V + Y++ P Q+LFTP+G Y IK L + SVAQG IL
Sbjct 138 GNPIPSIDFVNNIVSRYIAPFFPVDPNFVQSLFTPEGFYIDTGIKTLPLNVSVAQGVTIL 197
Query 281 ESAIRQQ-------IAAGNNVTVFGYSQSATISSLVMANL----AASADPPSPDELSFTL 329
+ + + +GN V V G SQSA I+SLVM +L + +A P + L+F+L
Sbjct 198 TNTLVGTNPPYAGLLTSGNTVNVSGESQSAMIASLVMRSLNPTNSGAAGSPYFNNLNFSL 257
Query 330 IGNPNNPNGGVATRFPGISFPSLGVTATGATPHNLYPTKIYTIEYDGVADFPRYPLNFVS 389
+GNP NPNGG+ RF G+S PSLG+ GATP N +PTKI+TIEYDG ADFPRYP+N ++
Sbjct 258 VGNPMNPNGGLFERFVGLSLPSLGIEMYGATPDNAFPTKIFTIEYDGAADFPRYPINVLA 317
Query 390 TLNAIAGTYYVHSNYFILTPEQIDAAVPLTNTVGPTMTQYYIIRTENLPLLEPLRSVPIV 449
LNA G +H Y LTPEQ+ A+PLTNTVGPT T YY+I T+NLPLL+P+R++P V
Sbjct 318 DLNAFMGIQSLHGQYATLTPEQLATAIPLTNTVGPTSTSYYMIPTQNLPLLDPVRAIPFV 377
Query 450 GNPLANLVQPNLKVIVNLGYGDPAYGYSTSPPNVATPFGLFPEVSPVV-IADALVAGTQQ 508
G P+A+LVQPNL+ +VN GYGDPAYG+STSPPNV TPFG+ P +S + L GTQQ
Sbjct 378 GKPIADLVQPNLRYLVNWGYGDPAYGWSTSPPNVPTPFGVLPPLSATTSLPGYLAIGTQQ 437
Query 509 GIGDFAYDVSH-----------LELPLPADGSTMPSTAPGSGTPVPPLSIDSLIDDLQVA 557
GI F D+S L PL A GS PS SG S I LQ
Sbjct 438 GISAFMNDISAGIATFPDLPALLATPLGAAGS--PSLL--SGLSPAAFSPTDFIHFLQST 493
Query 558 NRNLANTISKVAATSYATVLPTADIANAALTIVPSYNIHLFLEGIQQALKGDPM-GLVNA 616
N + N I++ AA +YA +LPTADIANA LT VPSYN++LFL G++QAL GDP GLV A
Sbjct 494 NTTVTNFITRTAANTYAALLPTADIANAILTTVPSYNVNLFLSGLEQALNGDPAGGLVYA 553
Query 617 VGYPLAADVALFTAAGGLQL 636
G P+AAD+AL T G QL
Sbjct 554 FGAPIAADIALGTLLAGFQL 573
>gi|183983416|ref|YP_001851707.1| PE family protein [Mycobacterium marinum M]
gi|183176742|gb|ACC41852.1| PE family protein [Mycobacterium marinum M]
Length=549
Score = 398 bits (1022), Expect = 2e-108, Method: Compositional matrix adjust.
Identities = 225/448 (51%), Positives = 299/448 (67%), Gaps = 33/448 (7%)
Query 217 LVMGGSGTPIPSARYVELANALYMSGSVPGVIAQALF---TPQGLYPVVVIKNLTFDSSV 273
LVMGG+G PIP ++ LAN LY+ A AL TP+ LYP+ K+LT D+SV
Sbjct 126 LVMGGTGIPIPGPGFINLANELYVRS------ANALLGLNTPEELYPLTGTKSLTLDASV 179
Query 274 AQGAVILESAIRQQIAA-GNNVTVFGYSQSATISSLVMANLAA-SADPPSPDELSFTLIG 331
++G IL++AI +Q+A GN VTVFG SQSA I+SL M LAA P+ +L+F L+G
Sbjct 180 SEGLTILDNAIMEQLAIPGNTVTVFGVSQSAVIASLEMQKLAALGPAAPTASQLNFVLLG 239
Query 332 NPNNPNGGVATRFPGISFPSLGVTATGATPHN-LYPTKIYTIEYDGVADFPRYPLNFVST 390
N NPNGG+ RFP +S PSLG+T G TP + +YPT YT+EYDG ADFPRYPLNF+S
Sbjct 240 NEMNPNGGLLARFPDLSIPSLGLTFYGGTPSDTIYPTANYTLEYDGFADFPRYPLNFISD 299
Query 391 LNAIAGTYYVHSNYFILTPEQIDAAVPLTNTVGPT-MTQYYIIRTENLPLLEPLRSVPIV 449
LNA+ G YVH Y LT Q+D A+PL + G + +T YYI+ TENLPLLEPLR++P++
Sbjct 300 LNAVMGIVYVHPTYLDLTQAQVDNAIPLATSPGYSGVTSYYILPTENLPLLEPLRAIPVI 359
Query 450 GNPLANLVQPNLKVIVNLGYGDPAYGYSTSPPNVATPFGLFPEVSPVVIADALVAGTQQG 509
GNPLANL+QP+LKV+VNLGYGDPAYGYSTSP ++ TPFGLFP+V P VIADALVAGT+QG
Sbjct 360 GNPLANLIQPDLKVLVNLGYGDPAYGYSTSPADITTPFGLFPDVPPHVIADALVAGTKQG 419
Query 510 IGDFAYDVSHLELPLPADGSTMPSTAPGSGTPVPPLSIDSLIDDLQVANR--NLANTISK 567
I DF+ D+ + + P+T P P L L+ L A + NT++K
Sbjct 420 ISDFSADIQQM--------FSQPATLPSP----PMLQAPDLMAALAAAPTPVEVVNTLTK 467
Query 568 VAATSYATVLPTADIANAALTIVPSYNIHLFLEGIQQALKGDPMGLVNAVGYPLAADVAL 627
+ + YAT+LP ADI A + +P+Y+ LF++ Q L+G+ L+NA GYP+AADV L
Sbjct 468 IVSDDYATLLPLADIGTAFVITMPTYDATLFVD---QLLQGN---LINAFGYPIAADVGL 521
Query 628 FTAAGGLQLLIIISAGRTIANDISAIVP 655
+GG+ L+ I ++ D+ ++ P
Sbjct 522 TAISGGVVALVAIGTLQSNIKDLQSLFP 549
>gi|183984291|ref|YP_001852582.1| PE family protein [Mycobacterium marinum M]
gi|183177617|gb|ACC42727.1| PE family protein [Mycobacterium marinum M]
Length=588
Score = 395 bits (1016), Expect = 9e-108, Method: Compositional matrix adjust.
Identities = 224/444 (51%), Positives = 296/444 (67%), Gaps = 17/444 (3%)
Query 217 LVMGGSGTPIPSARYVELANALYMSGSVPGVIA-QALFTPQGLYPVVVIKNLTFDSSVAQ 275
L++ SG P PSA Y+ Y+ + P A Q + TP GLYP IK+LT D S+A+
Sbjct 139 LILSESGVPTPSASYISDVYTKYVEPNFPSATAPQGVSTPNGLYPFTGIKDLTLDISLAR 198
Query 276 GAVILESAIRQQIAA---GNNVTVFGYSQSATISSLVMANLAASADPPSPDELSFTLIGN 332
GA IL AI QQ+AA G++V V GYSQSA +SSLVM L A S +++F L+GN
Sbjct 199 GATILNDAILQQLAALPAGSSVAVLGYSQSAVLSSLVMPKLLAEGVTSS--QVNFVLLGN 256
Query 333 PNNPNGGVATRFPGISFPSLGVTATGATPHNLYPTKIYTIEYDGVADFPRYPLNFVSTLN 392
P NPNGGV RFP ++ PSLG T GATP N +PT YT+EYDG ADFPRYP+N ++ +N
Sbjct 257 PMNPNGGVLARFPDLTLPSLGFTFYGATPDNAFPTVSYTLEYDGFADFPRYPINLLADIN 316
Query 393 AIAGTYYVHSNYFILTPEQIDAAVPLTNTVGPTMTQYYIIRTENLPLLEPLRSVPIVGNP 452
A+ G +VH++Y LT Q+D+AV L T GPT + YY+I TE+LPLL PLR +P VG+P
Sbjct 317 AVMGIPFVHADYQHLTQAQLDSAVQLP-TEGPTQSTYYMIPTEHLPLLAPLRFIPYVGDP 375
Query 453 LANLVQPNLKVIVNLGYGDPAYGYSTSPPNVATPFGLFPEVSPVVIADALVAGTQQGIGD 512
LA L++PNL+V+VNLGYGDPAYGY T P NV TPFGLFP VSP+ +A+ L AGTQQGI +
Sbjct 376 LAELLEPNLRVLVNLGYGDPAYGYDTGPANVPTPFGLFPPVSPLTVAEHLAAGTQQGIVN 435
Query 513 FAYDVSHL---ELPLPADGSTMPSTAPGSGTP-VPP-----LSIDSLIDDLQVANRNLAN 563
+ +PL T+ + P +GTP +PP SI+ I +Q AN +++
Sbjct 436 SGAALQAQGPPSIPLSDIAHTLTANPPWAGTPALPPSTSPASSIEDFILAVQAANSSISR 495
Query 564 TISKVAATSYATVLPTADIANAALTIVPSYNIHLFLEGIQQALKGDPM-GLVNAVGYPLA 622
K +T+YAT+LPT DIA+ + +PSYN++LFL+G+ QA+ G P+ GL+NA+G P+A
Sbjct 496 GFVKTLSTAYATLLPTTDIASELVFTLPSYNLNLFLDGVIQAINGQPIEGLINAIGNPIA 555
Query 623 ADVALFTAAGGLQLLIIISAGRTI 646
A L T AGG QL++I A TI
Sbjct 556 ASTGLITLAGGFQLIVISYALDTI 579
>gi|183980401|ref|YP_001848692.1| PE family protein [Mycobacterium marinum M]
gi|183173727|gb|ACC38837.1| PE family protein [Mycobacterium marinum M]
Length=550
Score = 393 bits (1009), Expect = 6e-107, Method: Compositional matrix adjust.
Identities = 223/451 (50%), Positives = 299/451 (67%), Gaps = 29/451 (6%)
Query 212 AQTVGLVMGGSGTPIPSARYVELANALYMSGSVPGVIAQALFTPQGLYPVVVIKNLTFDS 271
A L +G +G PIP YV+ AN L++ S I + L+TP+ LYP+ +K+LT ++
Sbjct 122 ANLTSLFLGPTGVPIPDESYVQAANNLFVRSSD---ILRPLYTPEELYPLTGVKSLTLNA 178
Query 272 SVAQGAVILESAIRQQIAA-GNNVTVFGYSQSATISSLVMANLAA-SADPPSPDELSFTL 329
SV +G IL++AI Q++ GN+VTVFGYSQSA I+SL M LAA P+ +L+F L
Sbjct 179 SVEEGLTILDNAIMAQLSIPGNSVTVFGYSQSAIIASLEMQKLAALGPSAPTASQLNFVL 238
Query 330 IGNPNNPNGGVATRFPGISFPSLGVTATGATPHN-LYPTKIYTIEYDGVADFPRYPLNFV 388
+GN NPNGG+ RFP +S PSLG+T GATP + +YPT IYT+EYDG ADFPRYPLNF+
Sbjct 239 VGNEMNPNGGMLARFPDLSLPSLGLTFYGATPSDTIYPTAIYTLEYDGFADFPRYPLNFI 298
Query 389 STLNAIAGTYYVHSNYFILTPEQIDAAVPLTNTVGPT-MTQYYIIRTENLPLLEPLRSVP 447
+ LNA+ G +VH Y LT Q+D+A+ L + G + +T YY+I TENLPLLEPLR++P
Sbjct 299 ADLNAVMGIPFVHVKYLDLTAAQVDSAIELPTSPGYSGVTSYYVIPTENLPLLEPLRAIP 358
Query 448 IVGNPLANLVQPNLKVIVNLGYGDPAYGYSTSPPNVATPFGLFPEVSPVVIADALVAGTQ 507
++GNPLANL+QP+LKVIVNLGYGDP YGYSTS +V TPFGLFP+VSP I DAL AGTQ
Sbjct 359 VIGNPLANLIQPDLKVIVNLGYGDPNYGYSTSYADVRTPFGLFPDVSPGTIVDALAAGTQ 418
Query 508 QGIGDFAYDVSHLELPLPADGSTMPSTAPGSGTP--VPPLSIDSLIDDLQVAN-RNLANT 564
+GI DF D+ + G +P TP VPP D L ++ + + NT
Sbjct 419 EGIQDFTADLQAMF------GQPIP-------TPDIVPPTPADILGKLSELPSPAQVVNT 465
Query 565 ISKVAATSYATVLPTADIANAALTIVPSYNIHLFLEGIQQALKGDPMGLVNAVGYPLAAD 624
++ V A YA +LPTADI A +T +P Y+ LF + Q L+G+ L++A GYP+AA
Sbjct 466 LTAVVANDYAVLLPTADIGLAVVTTLPLYSTQLFFD---QLLQGN---LIDAFGYPIAAT 519
Query 625 VALFTAAGGLQLLIIISAGRTIANDISAIVP 655
V L T G ++ L I +A +T DI +++P
Sbjct 520 VGLLTIGGAVEFLTIAAAAQTTVQDIGSLIP 550
>gi|183980400|ref|YP_001848691.1| PE family protein [Mycobacterium marinum M]
gi|183173726|gb|ACC38836.1| PE family protein [Mycobacterium marinum M]
Length=589
Score = 385 bits (988), Expect = 2e-104, Method: Compositional matrix adjust.
Identities = 225/455 (50%), Positives = 299/455 (66%), Gaps = 26/455 (5%)
Query 215 VGLVMGGSGTPIPSARYVELANALYMSGSVPGVIAQAL--FTPQGLYPVVVIKNLTFDSS 272
V L+MGGSGTPIP Y++ ++ +PG+ Q L TP+GLYP+ IK+L ++S
Sbjct 138 VALIMGGSGTPIPPPDYLQ-----DVAPYIPGMPTQLLPLNTPEGLYPLTAIKDLPLNTS 192
Query 273 VAQGAVILESAI---RQQIAAGNNVTVFGYSQSATISSLVMANLAASADPPSPDELSFTL 329
VA G IL++A+ + I GNNV V GYSQSA +SSL M NL A P + D L+FTL
Sbjct 193 VANGVQILDNALFGPQGLITLGNNVNVLGYSQSAVVSSLEMRNLQALGSP-NTDNLAFTL 251
Query 330 IGNPNNPNGGVATRFPGISFPSLGVTATGATPHNL-YPTKIYTIEYDGVADFPRYPLNFV 388
+GNP PNGG+ +RFPG+S P+LG+ G TP N Y YT+ YDG ADFP+YPLN +
Sbjct 252 LGNPMAPNGGLLSRFPGLSLPALGLDFYGGTPSNTGYELNQYTLLYDGYADFPQYPLNLL 311
Query 389 STLNAIAGTYYVHSNYFILTPEQIDAAVPLTNT-VGPT---MTQYYIIRTENLPLLEPLR 444
+ LNA AG +VH +Y L P + A L V P + YY+I LP+LEPLR
Sbjct 312 ADLNAFAGIQFVHGDYPDLDPNNLPAGYNLVQLPVSPGNNGLENYYMITYPGLPILEPLR 371
Query 445 SVPIVGNPLANLVQPNLKVIVNLGYGDPAYGYSTSPPNVATPFGLFPEVSPVVIADALVA 504
++P++GNPLA+LV+PNL +VNLGYGDP YGYST +V TPFGL P + PV A A+V
Sbjct 372 AIPVIGNPLADLVEPNLTYLVNLGYGDPNYGYSTGYADVTTPFGLLPPIDPVDFAGAMVN 431
Query 505 GTQQGIGDFAYDVSHLELPLPA---------DGSTMPSTAPGSGTPVPPLSIDSLIDDLQ 555
GTQQG+ F D+S + LP+ GS++PST P T V SI+ ID LQ
Sbjct 432 GTQQGVTAFVNDISAIPATLPSLSLPDFSQTGGSSVPSTLPAVPT-VTNASINGFIDALQ 490
Query 556 VANRNLANTISKVAATSYATVLPTADIANAALTIVPSYNIHLFLEGIQQALKGDPMGLVN 615
AN N+AN I+ V+A +YA +LPTADI N LT VPSYN++LFL+GIQQ + GDP+GL+N
Sbjct 491 AANTNIANAITNVSADTYAALLPTADIINTVLTTVPSYNVNLFLDGIQQFVNGDPVGLIN 550
Query 616 AVGYPLAADVALFTAAGGLQLLIIISAGRTIANDI 650
A+GYP+AADVA+ AGG +++++ + + +DI
Sbjct 551 AIGYPIAADVAVAALAGGFEVIVLADTAQEVVSDI 585
>gi|183980403|ref|YP_001848694.1| PE family protein [Mycobacterium marinum M]
gi|183173729|gb|ACC38839.1| PE family protein [Mycobacterium marinum M]
Length=550
Score = 383 bits (984), Expect = 5e-104, Method: Compositional matrix adjust.
Identities = 243/546 (45%), Positives = 324/546 (60%), Gaps = 39/546 (7%)
Query 111 MVAANRAQVASLVASNL--FGQNAPAIAALESLYECMWAQDAAAMAGYYVGASAVATQLA 168
+++A +V++ +A L FG I+ + + AQ A +A YY+ A
Sbjct 39 ILSAAADEVSTAIAQLLGTFGAEYQGISTQLAAFHAQIAQRLATVANYYINA-------- 90
Query 169 SWLQRLQSIPGAASLDARLPSSAEAPMGVVRAVNSAIAANAAAAQTVGLVMGGSGTPIPS 228
+ I AA L+ EA G+ NS A V + MGG+GTPIPS
Sbjct 91 ------EEINNAALLE-------EATAGLYSP-NSPPTVPAVFNDYVAIAMGGTGTPIPS 136
Query 229 ARYVELANALYMSGSVPGVIAQALFTPQGLYPVVVIKNLTFDSSVAQGAVILESAIRQQI 288
Y++ N LY+ PG IA+ALFTP+ LYP+ +K+L F +SV +G IL+ +I +I
Sbjct 137 TSYLDAVNTLYIQHIAPGAIAKALFTPEQLYPITGVKSLPFQTSVQEGLKILDISIWNEI 196
Query 289 AAGNNVTVFGYSQSATISSLVMAN-LAASADPPSPDELSFTLIGNPNNPNGGVATRFPGI 347
AGN+VTVFGYSQSA I+SL M + ++ + P P +++F L GN NPNGG+ R PG+
Sbjct 197 NAGNHVTVFGYSQSAVIASLEMQHFISLGPNAPDPSQINFILTGNEMNPNGGILARIPGL 256
Query 348 SFPSLGVTATGATPHNLYPTKIYTIEYDGVADFPRYPLNFVSTLNAIAGTYYVHSNYFIL 407
+ SLG+ GATP N Y T YT+EYDG ADFPRYPLN +S +NA+ G VH Y L
Sbjct 257 NVASLGLPFYGATPDNPYYTTTYTLEYDGFADFPRYPLNVLSDVNAVFGILTVHRTYPDL 316
Query 408 TPEQIDAAVPLTNTVGPTMTQYYIIRTENLPLLEPLRSVPIVGNPLANLVQPNLKVIVNL 467
TPEQI +A L T GPT YY+IRTENLPLL+P+R++P++G PLA LVQP+LKV+VNL
Sbjct 317 TPEQIASAT-LLPTEGPTTGTYYMIRTENLPLLDPVRAIPVIGEPLAALVQPDLKVLVNL 375
Query 468 GYGDPAYGYSTSPPNVATPFGLFPEVSPVVIADALVAGTQQGIGDFAYDVSHLELPLPAD 527
GYGDP YGYSTSP NV TPFGLFP+VS V+ADALVAGT QGI DF LP
Sbjct 376 GYGDPNYGYSTSPANVPTPFGLFPDVSLQVVADALVAGTHQGINDFG-------AALPTA 428
Query 528 GSTMPSTAPGSGTPVPPLSIDSLIDDLQVANRNLANTISKVAATSYATVLPTADIANAAL 587
ST P AP P + + N+ANT++ V +T Y+ +LPTADI +
Sbjct 429 LSTTPQIAPLEFPPYVQSVLPPAPPPMPATPINIANTLASVVSTGYSVLLPTADIGLGFV 488
Query 588 TIVPSYNIHLFLEGIQQALKGDPMGLVNAVGYPLAADVALFTAAGGLQLLIIISAGRTIA 647
T +P+YN+ LFL + Q GD L A+ PLAA L G ++ + ++ A IA
Sbjct 489 TSLPAYNLTLFLSQLAQ---GD---LRAAIELPLAATFGLGALGGMIEFIAVMEAAAEIA 542
Query 648 NDISAI 653
D+ ++
Sbjct 543 QDLQSL 548
>gi|340625188|ref|YP_004743640.1| pe family protein [Mycobacterium canettii CIPT 140010059]
gi|340003378|emb|CCC42498.1| pe family protein [Mycobacterium canettii CIPT 140010059]
Length=550
Score = 383 bits (984), Expect = 5e-104, Method: Compositional matrix adjust.
Identities = 225/444 (51%), Positives = 296/444 (67%), Gaps = 27/444 (6%)
Query 217 LVMGGSGTPIPSARYVELANALYMSGSVPGVIAQALFTPQGLYPVVVIKNLTFDSSVAQG 276
L G +G P+P YV+ AN LY+ + G + QA+FTP+ LYP+ +++L ++SV +G
Sbjct 127 LFFGPTGIPLPPPSYVDAANMLYVRSA--GAL-QAVFTPEELYPLTGVRSLVLNTSVEEG 183
Query 277 AVILESAIRQQIAA-GNNVTVFGYSQSATISSLVMANLAASADPPSP-DELSFTLIGNPN 334
I+ AI ++A GN VTVFG+SQSA I+SL M LAA P +L+F L+GN
Sbjct 184 LTIMHDAIMGELAIPGNTVTVFGWSQSAIIASLEMHRLAAMGPAAPPASDLNFVLVGNEM 243
Query 335 NPNGGVATRFPGISFPSLGVTATGATPHN-LYPTKIYTIEYDGVADFPRYPLNFVSTLNA 393
NPNGG+ RFP ++ PSLG+T GATP + +YPT IYT+EYDG ADFPRYPLN +S LNA
Sbjct 244 NPNGGMLARFPDLTLPSLGLTFYGATPSDTIYPTAIYTLEYDGFADFPRYPLNIISDLNA 303
Query 394 IAGTYYVHSNYFILTPEQIDAAVPLTNTVGPT-MTQYYIIRTENLPLLEPLRSVPIVGNP 452
+AG +VH+ Y LTP Q+D A L + G T +T YYIIRTENLPLL+PLR+VP++G+P
Sbjct 304 VAGITFVHTKYLDLTPAQVDGATKLPTSPGYTGVTDYYIIRTENLPLLQPLRAVPVIGDP 363
Query 453 LANLVQPNLKVIVNLGYGDPAYGYSTSPPNVATPFGLFPEVSPVVIADALVAGTQQGIGD 512
LA+L+QPNLKVIVNLGYGDP YGYSTS +V TPFGL+P+V P VIADAL AGTQQGI D
Sbjct 364 LADLIQPNLKVIVNLGYGDPNYGYSTSYADVRTPFGLWPDVPPQVIADALAAGTQQGILD 423
Query 513 FAYDVSHLELPLPADGSTMPSTAPGSGTPVPPLSIDSLIDDLQVANR--NLANTISKVAA 570
F D+ L S P T P P P L+ + A R + NT++++ +
Sbjct 424 FTADLQAL--------SAQPLTLPQIQLPQPA----DLVAAVAAAPRPEEVVNTLARIIS 471
Query 571 TSYATVLPTADIANAALTIVPSYNIHLFLEGIQQALKGDPMGLVNAVGYPLAADVALFTA 630
T+YA +LPTADIA A +T +P Y LF + Q G+ L+NA+GYPLAA V L T
Sbjct 472 TNYAVLLPTADIALALVTTLPLYTTQLF---VSQLAAGN---LINAIGYPLAATVGLGTI 525
Query 631 AGGLQLLIIISAGRTIANDISAIV 654
AGG++LL +++A +I +V
Sbjct 526 AGGVELLTLLAAASDTVRNIEGLV 549
>gi|183983956|ref|YP_001852247.1| PPE family protein [Mycobacterium marinum M]
gi|183177282|gb|ACC42392.1| PPE family protein [Mycobacterium marinum M]
Length=594
Score = 377 bits (968), Expect = 3e-102, Method: Compositional matrix adjust.
Identities = 241/564 (43%), Positives = 330/564 (59%), Gaps = 55/564 (9%)
Query 110 AMVAANRAQVASLVAS--NLFGQNAPAIAALESLYECMWAQDAAAMAGYYVGASAVATQL 167
AM+AA +V+ L+A + +GQ A+ +++ +A AA Y A A T
Sbjct 38 AMMAAAGDEVSQLIAKLFSAYGQECQAVITDAAVFHDHFAATLAAAGSVYTQAEAAGT-- 95
Query 168 ASWLQRLQSIPGAASLDARLPSSAEAPMGVVRAVNSAIAANAAAAQTVG-----LVMGGS 222
A+ Q L + L S A +G A S A AA G LV+GGS
Sbjct 96 ATLSQALTT----------LSSPIRALLGGTAASTSGAMAAAAPMAAAGDPIYTLVVGGS 145
Query 223 GTPIPSARYVELANALYMSGSVP--GVIAQALFTPQGLYPVVVIKNLTFDSSVAQGAVIL 280
G PIPS Y+ + +++ P + Q LFTP Y IK L + SV QG IL
Sbjct 146 GNPIPSPAYISNVVSKFVAPYFPVDPALVQGLFTPAQFYIDTGIKTLPLNVSVPQGVAIL 205
Query 281 ESAIRQQ-------IAAGNNVTVFGYSQSATISSLVMANL----AASADPPSPDELSFTL 329
+ + + +GN V V G SQSA I+SLVM L + +A P D+L+F+L
Sbjct 206 TNTLVGTNPPYLGLLTSGNTVNVTGDSQSAMIASLVMRALNPTNSGAAGSPYFDDLTFSL 265
Query 330 IGNPNNPNGGVATRFPGISFPSLGVTATGATPHNLYPTKIYTIEYDGVADFPRYPLNFVS 389
GNP NPNGG+ RFPG+S PS+G+ G+TP N +PT ++T+EYDG ADFPRYP+NF++
Sbjct 266 FGNPMNPNGGLFARFPGLSLPSMGLDFYGSTPDNSFPTNVFTLEYDGAADFPRYPINFLA 325
Query 390 TLNAIAGTYYVHSNYFILTPEQIDAAVPLTNTVGPTMTQYYIIRTENLPLLEPLRSVPIV 449
LNA G +H Y LTPEQ+D A+PLTNTVGPT T YY+I + +LPLL+P+R++P++
Sbjct 326 DLNAFLGIQSLHGQYPSLTPEQLDTAIPLTNTVGPTSTNYYMIPSPHLPLLDPVRAIPVI 385
Query 450 GNPLANLVQPNLKVIVNLGYGDPAYGYSTSPPNVATPFGLFPEVSPVV-IADALVAGTQQ 508
G P+A+L++P+L+ +VN GYGDPAYG+STSPPNV TPFG+ P + + L GTQQ
Sbjct 386 GTPIADLIEPDLRYLVNWGYGDPAYGWSTSPPNVPTPFGVLPPLQATTSLPGYLAIGTQQ 445
Query 509 GIGDFAYDV------------SHLELPLPAD---GSTMPSTAPGSGTPVPPLSIDSLIDD 553
G+ F D+ + L PL A G+ + +P + +P + I
Sbjct 446 GVNAFVSDINAEISAYSNLPSTLLSAPLGASGAGGTLLAGLSPATFSP------NDFIHF 499
Query 554 LQVANRNLANTISKVAATSYATVLPTADIANAALTIVPSYNIHLFLEGIQQALKGDPM-G 612
LQ AN + N IS AA +YA +LPTADIANA +T VPSY+++LFL GI+QA+ GDP G
Sbjct 500 LQSANTTIVNDISNTAANTYAFLLPTADIANALVTSVPSYDLNLFLSGIEQAINGDPAGG 559
Query 613 LVNAVGYPLAADVALFTAAGGLQL 636
LV A G P+AA++AL T AGG +L
Sbjct 560 LVYAFGAPIAANIALGTLAGGFEL 583
>gi|240168156|ref|ZP_04746815.1| PE family protein [Mycobacterium kansasii ATCC 12478]
Length=618
Score = 371 bits (953), Expect = 2e-100, Method: Compositional matrix adjust.
Identities = 214/453 (48%), Positives = 286/453 (64%), Gaps = 23/453 (5%)
Query 217 LVMGGSGTPIPSARYVELANALYMSGSVPGVIAQALFTPQGLYPVVVIKNLTFDSSVAQG 276
L+M GSGTPIPS Y++ A Y+SG+ +I L TP+GLYP+ IK+L SV G
Sbjct 168 LIMTGSGTPIPSLAYMQ-AVVPYISGTPSQLIP--LNTPEGLYPLTQIKDLPLTQSVTTG 224
Query 277 AVILESAI---RQQIAAGNNVTVFGYSQSATISSLVMANLAASADPPSPDELSFTLIGNP 333
IL A+ + I AG NV V GYSQSA +SS+ M L P + + LSFTL+GNP
Sbjct 225 VQILHDALFGPQGMITAGGNVAVLGYSQSAILSSMEMRQLILQGSPNTAN-LSFTLLGNP 283
Query 334 NNPNGGVATRFPGISFPSLGVTATGATPHNL-YPTKIYTIEYDGVADFPRYPLNFVSTLN 392
PNGG+ +RFPG+S P++G+ GATP N Y YT++YDG ADFPRYP+NF++ LN
Sbjct 284 MAPNGGLLSRFPGLSMPAMGLEFYGATPSNSGYQLSQYTLQYDGFADFPRYPINFLADLN 343
Query 393 AIAGTYYVHSNYFILTPEQIDAAVPLTNT-VGPT---MTQYYIIRTENLPLLEPLRSVPI 448
A G +VH++Y L P + L V P + YY+I LPLLEPLR++P+
Sbjct 344 AFMGIQFVHTDYSYLDPNNLPPGYNLVELPVSPANNGLEHYYMITYPGLPLLEPLRALPV 403
Query 449 VGNPLANLVQPNLKVIVNLGYGDPAYGYSTSPPNVATPFGLFPEVSPVVIADALVAGTQQ 508
+G+PLA+LV+PNL +VNLGYGDP +GYST +V T FGLFP + PV A +V QQ
Sbjct 404 IGDPLADLVEPNLTYLVNLGYGDPHFGYSTGYADVPTRFGLFPSIDPVTFAGDMVGAAQQ 463
Query 509 GIGDFAYDVSHLELPLPADGSTMPSTAPGSGTP----VPPLS------IDSLIDDLQVAN 558
G+ FA D+ + LP ++P+ A G+P +P L ID +ID L+ AN
Sbjct 464 GVNAFAGDIGAM-LPTSLPDFSLPAAALTGGSPTAWALPTLPAPTGSPIDGIIDTLKAAN 522
Query 559 RNLANTISKVAATSYATVLPTADIANAALTIVPSYNIHLFLEGIQQALKGDPMGLVNAVG 618
++ N IS AA +YA LPTADI N T VPSYN++LFL+GIQ+ GDP GLVNA G
Sbjct 523 THITNAISSAAADTYAMALPTADIVNTLATKVPSYNVNLFLDGIQELANGDPAGLVNAFG 582
Query 619 YPLAADVALFTAAGGLQLLIIISAGRTIANDIS 651
YP+AADVAL T AGG Q +++++ ++ D++
Sbjct 583 YPVAADVALLTLAGGFQTIVLLNGVESVIGDLT 615
>gi|118616727|ref|YP_905059.1| PE family protein [Mycobacterium ulcerans Agy99]
gi|118568837|gb|ABL03588.1| PE family protein [Mycobacterium ulcerans Agy99]
Length=547
Score = 363 bits (933), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 203/409 (50%), Positives = 271/409 (67%), Gaps = 16/409 (3%)
Query 217 LVMGGSGTPIPSARYVELANALYMSGSVPGVIA-QALFTPQGLYPVVVIKNLTFDSSVAQ 275
L++ SG P PSA Y+ Y+ + P A Q + TP GLYP IK+L+ D S+A+
Sbjct 141 LILSESGVPTPSASYISDVYTKYVEPNFPSATAPQGVSTPNGLYPFTGIKDLSLDISLAR 200
Query 276 GAVILESAIRQQIAA---GNNVTVFGYSQSATISSLVMANLAASADPPSPDELSFTLIGN 332
GA IL AI QQ+AA G++V V GYSQSA +SS VM L A S +++F L+GN
Sbjct 201 GATILNDAILQQLAALPAGSSVAVLGYSQSAVLSSRVMPKLLAEGVTSS--QVNFVLLGN 258
Query 333 PNNPNGGVATRFPGISFPSLGVTATGATPHNLYPTKIYTIEYDGVADFPRYPLNFVSTLN 392
P NPNGGV RFP ++ PSLG T GATP N +PT YT+EYDG ADFPRYP+N ++ +N
Sbjct 259 PMNPNGGVLARFPDLTLPSLGFTFYGATPDNAFPTVSYTLEYDGFADFPRYPINLLADIN 318
Query 393 AIAGTYYVHSNYFILTPEQIDAAVPLTNTVGPTMTQYYIIRTENLPLLEPLRSVPIVGNP 452
A+ G +VH++Y LT Q+D+AV L T GPT + YY+I TE+LPLL PLR +P VG+P
Sbjct 319 AVMGIPFVHADYQDLTQAQLDSAVQLP-TEGPTQSTYYMIPTEHLPLLAPLRFIPYVGDP 377
Query 453 LANLVQPNLKVIVNLGYGDPAYGYSTSPPNVATPFGLFPEVSPVVIADALVAGTQQGIGD 512
LA L++PNL+V+VN GYGDPAYGY T P NV TPFGLFP VSP+ +A+ L AGTQQGI +
Sbjct 378 LAELLEPNLRVLVNFGYGDPAYGYDTGPANVPTPFGLFPPVSPLTVAEHLAAGTQQGIVN 437
Query 513 FAYDVSHL---ELPLPADGSTMPSTAPGSGTP-VPP-----LSIDSLIDDLQVANRNLAN 563
+ +PL T+ + P +GTP +PP SI+ I +Q AN +++
Sbjct 438 SGAALQAQGPPSIPLSDIAHTLTANPPWAGTPALPPSTSPASSIEDFILAVQAANSSISR 497
Query 564 TISKVAATSYATVLPTADIANAALTIVPSYNIHLFLEGIQQALKGDPMG 612
K +T+YAT+LPT DIA+ + +PSYN++LFL+G+ QA+ G P+G
Sbjct 498 GFVKTLSTAYATLLPTTDIASELVFTLPSYNLNLFLDGVIQAINGQPIG 546
>gi|15839533|ref|NP_334570.1| PE family protein [Mycobacterium tuberculosis CDC1551]
gi|254233542|ref|ZP_04926868.1| PE family protein [Mycobacterium tuberculosis C]
gi|254366603|ref|ZP_04982647.1| PE family protein [Mycobacterium tuberculosis str. Haarlem]
gi|13879644|gb|AAK44384.1| PE family protein [Mycobacterium tuberculosis CDC1551]
gi|124603335|gb|EAY61610.1| PE family protein [Mycobacterium tuberculosis C]
gi|134152115|gb|EBA44160.1| PE family protein [Mycobacterium tuberculosis str. Haarlem]
gi|323717137|gb|EGB26346.1| PE family protein [Mycobacterium tuberculosis CDC1551A]
Length=588
Score = 363 bits (932), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 207/435 (48%), Positives = 277/435 (64%), Gaps = 27/435 (6%)
Query 213 QTVGLVMGGSGTPIPSARYVELANALYMSGSVPGVIAQALFTPQGLYPVVVIKNLTFDSS 272
Q ++MGG+G+PIP+ YV L++ V + +AL TP+ LYP+ +K+L F +S
Sbjct 159 QNTAIIMGGTGSPIPTPSYVNAITTLFIDPVVSNPVVKALVTPEELYPITGVKSLPFQTS 218
Query 273 VAQGAVILESAIRQQIAAGNNVTVFGYSQSATISSLVMANLAA-SADPPSPDELSFTLIG 331
V G IL+ AI +QI AGN+VTVFGYSQSA I+SL M +L + + PSP +L+F LIG
Sbjct 219 VQLGLQILDGAIWEQINAGNHVTVFGYSQSAVIASLEMQHLISLGPNAPSPSQLNFILIG 278
Query 332 NPNNPNGGVATRFPGISFPSLGVTATGATPHNLYPTKIYTIEYDGVADFPRYPLNFVSTL 391
N NPNGG+ R PG++ +LG+ GATP N YPT YT+EYDG ADFPRYPLN +S +
Sbjct 279 NEMNPNGGILARIPGLNVTTLGLPFYGATPDNPYPTTTYTLEYDGFADFPRYPLNVLSDI 338
Query 392 NAIAGTYYVHSNYFILTPEQIDAAVPLTNTVGPTMTQYYIIRTENLPLLEPLRSVPIVGN 451
NA+ G VH+ Y LTP QI +A L T G T YYII TE+LPLL PLR++P++G
Sbjct 339 NAVFGILTVHTTYADLTPAQIASATQLP-TQGTTSNTYYIIETEHLPLLAPLRAIPVIGP 397
Query 452 PLANLVQPNLKVIVNLGYGDPAYGYSTSPPNVATPFGLFPEVSPVVIADALVAGTQQGIG 511
PLA LV+PNL+VIVNLGYGDP +GYSTSP NV TPFGLFP+V V+ADALVAGTQQG+
Sbjct 398 PLAALVEPNLEVIVNLGYGDPRFGYSTSPANVPTPFGLFPDVPASVVADALVAGTQQGVN 457
Query 512 DFAYDVSHLELPLPADGSTMPSTAPGSGTPVPPLSIDSLIDDLQVANR------NLANTI 565
DF + LPA +T+P TP+P N+A+T
Sbjct 458 DFMVE-------LPAALNTLPQ------TPMPAFPPYVPTLLPPPPPPQPATLINIADTF 504
Query 566 SKVAATSYATVLPTADIANAALTIVPSYNIHLFLEGIQQALKGDPMGLVNAVGYPLAADV 625
+ V +T Y+ +LPTAD+ A +TI+P+Y++ LF + Q G+ L A+ PLAA +
Sbjct 505 ASVVSTGYSILLPTADLGLAFVTILPAYDLTLF---VNQLAAGN---LRAAIELPLAATI 558
Query 626 ALFTAAGGLQLLIII 640
L G ++ + ++
Sbjct 559 GLAALGGMIEFIAVV 573
>gi|340625187|ref|YP_004743639.1| PE family protein [Mycobacterium canettii CIPT 140010059]
gi|340003377|emb|CCC42497.1| PE family protein [Mycobacterium canettii CIPT 140010059]
Length=588
Score = 361 bits (927), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 207/435 (48%), Positives = 277/435 (64%), Gaps = 27/435 (6%)
Query 213 QTVGLVMGGSGTPIPSARYVELANALYMSGSVPGVIAQALFTPQGLYPVVVIKNLTFDSS 272
Q ++MGG+G+PIP+ Y+ L++ V + +AL TP+ LYP+ +K+L F +S
Sbjct 159 QNTAIIMGGTGSPIPTPSYLNAITTLFIDPVVSNPVIKALVTPEELYPITGVKSLPFQTS 218
Query 273 VAQGAVILESAIRQQIAAGNNVTVFGYSQSATISSLVMANLAA-SADPPSPDELSFTLIG 331
V G IL+ AI +QI AGN+VTVFGYSQSA I+SL M +L + + PSP +L+F LIG
Sbjct 219 VQLGLQILDGAIWEQINAGNHVTVFGYSQSAVIASLEMQHLISLGPNAPSPSQLNFILIG 278
Query 332 NPNNPNGGVATRFPGISFPSLGVTATGATPHNLYPTKIYTIEYDGVADFPRYPLNFVSTL 391
N NPNGG+ R PG++ +LG+ GATP N YPT YT+EYDG ADFPRYPLN +S +
Sbjct 279 NEMNPNGGILARIPGLNVTTLGLPFYGATPDNPYPTTTYTLEYDGFADFPRYPLNVLSDI 338
Query 392 NAIAGTYYVHSNYFILTPEQIDAAVPLTNTVGPTMTQYYIIRTENLPLLEPLRSVPIVGN 451
NA+ G VH+ Y LTP QI +A L T G T YYII TE+LPLL PLR++P++G
Sbjct 339 NAVFGILTVHTTYADLTPAQIASATQLP-TQGTTSNTYYIIETEHLPLLAPLRAIPVIGP 397
Query 452 PLANLVQPNLKVIVNLGYGDPAYGYSTSPPNVATPFGLFPEVSPVVIADALVAGTQQGIG 511
PLA LV+PNL+VIVNLGYGDP +GYSTSP NV TPFGLFP+V V+ADALVAGTQQG+
Sbjct 398 PLAALVEPNLEVIVNLGYGDPRFGYSTSPANVPTPFGLFPDVPASVVADALVAGTQQGVN 457
Query 512 DFAYDVSHLELPLPADGSTMPSTAPGSGTPVPPLSIDSLIDDLQVANR------NLANTI 565
DF + LPA +T+P TP+P N+A+T
Sbjct 458 DFMVE-------LPAALNTLPQ------TPMPAFPPYVPTVLPPPPPPQPATLINIADTF 504
Query 566 SKVAATSYATVLPTADIANAALTIVPSYNIHLFLEGIQQALKGDPMGLVNAVGYPLAADV 625
+ V +T Y+ +LPTAD+ A +TI+P+Y++ LF + Q G+ L A+ PLAA +
Sbjct 505 ASVVSTGYSILLPTADLGLAFVTILPAYDLTLF---VNQLAAGN---LRAAIELPLAATI 558
Query 626 ALFTAAGGLQLLIII 640
L G ++ + I+
Sbjct 559 GLAALGGMIEFIAIV 573
>gi|253797071|ref|YP_003030072.1| PE family protein [Mycobacterium tuberculosis KZN 1435]
gi|289552402|ref|ZP_06441612.1| PE family protein [Mycobacterium tuberculosis KZN 605]
gi|297632625|ref|ZP_06950405.1| PE family protein [Mycobacterium tuberculosis KZN 4207]
6 more sequence titles
Length=588
Score = 360 bits (925), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 225/520 (44%), Positives = 307/520 (60%), Gaps = 49/520 (9%)
Query 128 FGQNAPAIAALESLYECMWAQDAAAMAGYYVGASAVATQLASWLQRLQSIPGAASLDARL 187
+GQ AI+A + + + Q AA A +V A AT ++ +Q
Sbjct 96 YGQQFQAISAQVAAFHNEFTQRLAAAAKAFVNAE--ATNTSALVQ--------------- 138
Query 188 PSSAEAPMGVVRAVNSAIAANAAAAQTVGLVMGGSGTPIPSARYVELANALYMSGSVPGV 247
EA G+ + + + Q ++MGG+G+PIP+ YV L++ V
Sbjct 139 ----EATAGLFKPTSPPVLP-PMFNQNTAIIMGGTGSPIPTPSYVNAITTLFIDPVVSNP 193
Query 248 IAQALFTPQGLYPVVVIKNLTFDSSVAQGAVILESAIRQQIAAGNNVTVFGYSQSATISS 307
+ +AL TP+ LYP+ +K+L F +SV G IL+ AI +QI AGN+VTVFGYSQSA I+S
Sbjct 194 VVKALVTPEELYPITGVKSLPFQTSVQLGLQILDGAIWEQINAGNHVTVFGYSQSAVIAS 253
Query 308 LVMANLAA-SADPPSPDELSFTLIGNPNNPNGGVATRFPGISFPSLGVTATGATPHNLYP 366
L M +L + + PSP +L+F LIGN NPNGG+ R PG++ +LG+ GATP N YP
Sbjct 254 LEMQHLISLGPNAPSPSQLNFILIGNEMNPNGGILARIPGLNVTTLGLPFYGATPDNPYP 313
Query 367 TKIYTIEYDGVADFPRYPLNFVSTLNAIAGTYYVHSNYFILTPEQIDAAVPLTNTVGPTM 426
T YT+EYDG ADFPRYPLN +S +NA+ G VH+ Y LTP QI +A L T G T
Sbjct 314 TTTYTLEYDGFADFPRYPLNVLSDINAVFGILTVHTTYADLTPAQIASATQLP-TQGTTS 372
Query 427 TQYYIIRTENLPLLEPLRSVPIVGNPLANLVQPNLKVIVNLGYGDPAYGYSTSPPNVATP 486
YYII TE+LPLL PLR++P++G PLA LV+PNL+VIVNLGYGDP +GYSTSP NV TP
Sbjct 373 NTYYIIETEHLPLLAPLRAIPVIGPPLAALVEPNLEVIVNLGYGDPRFGYSTSPANVPTP 432
Query 487 FGLFPEVSPVVIADALVAGTQQGIGDFAYDVSHLELPLPADGSTMPSTAPGSGTPVPPLS 546
FGLFP+V V+ADALVAGTQQG+ DF + LPA +T+P TP+P
Sbjct 433 FGLFPDVPASVVADALVAGTQQGVNDFMVE-------LPAALNTLPQ------TPMPAFP 479
Query 547 IDSLIDDLQVANR------NLANTISKVAATSYATVLPTADIANAALTIVPSYNIHLFLE 600
N+A+T + V +T Y+ +LPTAD+ A +TI+P+Y++ LF
Sbjct 480 PYVPTLLPPPPPPQPATLINIADTFASVVSTGYSILLPTADLGLAFVTILPAYDLTLF-- 537
Query 601 GIQQALKGDPMGLVNAVGYPLAADVALFTAAGGLQLLIII 640
+ Q G+ L A+ PLAA + L G ++ + I+
Sbjct 538 -VNQLAAGN---LRAAIELPLAATIGLAALGGMIEFIAIV 573
>gi|183983451|ref|YP_001851742.1| PE family protein [Mycobacterium marinum M]
gi|183176777|gb|ACC41887.1| PE family protein [Mycobacterium marinum M]
Length=575
Score = 355 bits (911), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 220/479 (46%), Positives = 303/479 (64%), Gaps = 33/479 (6%)
Query 191 AEAPMGVVRAVNSAIAANAAAAQ------TVGLVMGGSGTPIPSARYVELANALYMSGSV 244
AEA + + ++A + A +AQ T G ++GGSG PIPS YV L
Sbjct 90 AEADAQALLSGSTAASGGAPSAQATLQGTTFGWMIGGSGNPIPSQTYVN--KVLPYVNEA 147
Query 245 PGVI---AQALFTPQGLYPVVV-IKNLTFDSSVAQGAVILESAIRQQIAA--GNNVTVFG 298
GV+ A+ALFTP+GL P+ IK+L ++SV QG IL+ I+ +AA G++V V G
Sbjct 148 FGVLPENAKALFTPEGLQPIYTGIKSLPLNTSVDQGVQILDQTIKSTLAAHPGDSVAVLG 207
Query 299 YSQSATISSLVMANL---AASADPPSPDELSFTLIGNPNNPNGGVATRFPGISFPSLGVT 355
YSQSA ISSL M +L A + PP P EL FTL+GNP NPNGG+ +RF G++ PSLG+
Sbjct 208 YSQSAIISSLEMRDLMNPALNPTPPLPTELGFTLLGNPMNPNGGLLSRFVGLNVPSLGLD 267
Query 356 ATGATPHNL-YPTKIYTIEYDGVADFPRYPLNFVSTLNAIAGTYYVHSNYFILTPEQIDA 414
G+TP + YPT IYT++YDG A FPRYPLN +S LNA G +H Y L P +
Sbjct 268 FYGSTPPDTPYPTNIYTLQYDGFASFPRYPLNLLSDLNAFLGIQTIHGQYPDLDPANLPP 327
Query 415 AVPLT------NTVGPTMTQYYIIRTENLPLLEPLRSVPIVGNPLANLVQPNLKVIVNLG 468
+ + G T YY+I NLP+ PLR++P++G+PLA+L++PN++++VNLG
Sbjct 328 GYEMVTLPGSASLTGQGQTNYYMITHPNLPITAPLRAIPVIGDPLADLIEPNMRILVNLG 387
Query 469 YGDPAYGYSTSPPNVATPFGLFPEVSPVVIADALVAGTQQGIGDFAYDVSHLELPLPADG 528
YGDP YGYSTSP NV TPFGLFP+V+ + +A L GTQQG F D+S + P AD
Sbjct 388 YGDPNYGYSTSPANVPTPFGLFPDVNYLEVAGMLADGTQQGGNAFIADISAMA-PSFADL 446
Query 529 STMPSTAPGS-GT------PVPPLSIDSLIDDLQVANRNLANTISKVAATSYATVLPTAD 581
T ++A GS GT P S + +I LQ AN +AN+I+ ++ +YA +LPTAD
Sbjct 447 PTSFASAMGSAGTAGSGLLAAAPTSANEVIRALQDANTAIANSIANASSNAYAVLLPTAD 506
Query 582 IANAALTIVPSYNIHLFLEGIQQALKGDPM-GLVNAVGYPLAADVALFTAAGGLQLLII 639
IAN +T +P+Y+I+LFL+GI+Q + GDP+ GL A+ PLAA+ A+ T A G QL+++
Sbjct 507 IANMLVTSMPAYDINLFLDGIEQIVDGDPLGGLTYALVAPLAANTAIVTLASGFQLIVL 565
>gi|31791329|ref|NP_853822.1| PE family protein [Mycobacterium bovis AF2122/97]
gi|121636063|ref|YP_976286.1| PE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224988536|ref|YP_002643223.1| PE family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|31616914|emb|CAD93020.1| PE FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
gi|121491710|emb|CAL70171.1| PE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224771649|dbj|BAH24455.1| PE family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|341600079|emb|CCC62748.1| PE family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length=588
Score = 353 bits (907), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 224/523 (43%), Positives = 302/523 (58%), Gaps = 55/523 (10%)
Query 128 FGQNAPAIAALESLYECMWAQDAAAMAGYYVGASAVATQLASWLQRLQSIPGAASLDARL 187
+GQ AI+A VA + QRL + A
Sbjct 96 YGQQFQAISA------------------------QVAAFHNEFTQRLAAAANAFVNAEAT 131
Query 188 PSSA---EAPMGVVRAVNSAIAANAAAAQTVGLVMGGSGTPIPSARYVELANALYMSGSV 244
+SA EA G+ + + + Q ++MGG+G+PIP+ YV L++ V
Sbjct 132 NTSALVQEATAGLFKPTSPPVLP-PMFNQNTAIIMGGTGSPIPTPSYVNAITTLFIDPVV 190
Query 245 PGVIAQALFTPQGLYPVVVIKNLTFDSSVAQGAVILESAIRQQIAAGNNVTVFGYSQSAT 304
+ +AL TP+ LYP+ +K+L F +SV G IL+ AI +QI AGN+VTVFGYSQSA
Sbjct 191 SNPVVKALVTPEELYPITGVKSLPFQTSVQLGLQILDGAIWEQINAGNHVTVFGYSQSAV 250
Query 305 ISSLVMANLAA-SADPPSPDELSFTLIGNPNNPNGGVATRFPGISFPSLGVTATGATPHN 363
I+SL M +L + + PSP +L+F LIGN NPNGG+ R PG++ +LG+ GATP N
Sbjct 251 IASLEMQHLISLGPNAPSPSQLNFILIGNEMNPNGGILARIPGLNVTTLGLPFYGATPDN 310
Query 364 LYPTKIYTIEYDGVADFPRYPLNFVSTLNAIAGTYYVHSNYFILTPEQIDAAVPLTNTVG 423
YPT YT+EYDG ADFPRYPLN +S +NA+ G VH+ Y LTP QI +A L T G
Sbjct 311 PYPTTTYTLEYDGFADFPRYPLNVLSDINAVFGILTVHTTYADLTPAQIASATQLP-TQG 369
Query 424 PTMTQYYIIRTENLPLLEPLRSVPIVGNPLANLVQPNLKVIVNLGYGDPAYGYSTSPPNV 483
T YYII TE+LPLL PLR++P++G PLA LV+PNL+VIVNLGYGDP +GYSTSP NV
Sbjct 370 TTSNTYYIIETEHLPLLAPLRAIPVIGPPLAALVEPNLEVIVNLGYGDPRFGYSTSPANV 429
Query 484 ATPFGLFPEVSPVVIADALVAGTQQGIGDFAYDVSHLELPLPADGSTMPSTAPGSGTPVP 543
TPFGLFP+V V+ADALVAGTQQG+ DF + LPA +T+P TP+P
Sbjct 430 PTPFGLFPDVPASVVADALVAGTQQGVNDFMVE-------LPAALNTLPQ------TPMP 476
Query 544 PLSIDSLIDDLQVANR------NLANTISKVAATSYATVLPTADIANAALTIVPSYNIHL 597
N+A+T + V +T Y+ +LPTAD+ A +TI+P+Y++ L
Sbjct 477 AFPPYVPTLLPPPPPPQPATLINIADTFASVVSTGYSILLPTADLGLAFVTILPAYDLTL 536
Query 598 FLEGIQQALKGDPMGLVNAVGYPLAADVALFTAAGGLQLLIII 640
F + Q G+ L A+ PLAA + L G ++ + I+
Sbjct 537 F---VNQLAAGN---LRAAIELPLAATIGLAALGGMIEFIAIV 573
>gi|289572730|ref|ZP_06452957.1| PE family protein [Mycobacterium tuberculosis K85]
gi|339630233|ref|YP_004721875.1| PE family protein [Mycobacterium africanum GM041182]
gi|289537161|gb|EFD41739.1| PE family protein [Mycobacterium tuberculosis K85]
gi|339329589|emb|CCC25225.1| PE family protein [Mycobacterium africanum GM041182]
Length=588
Score = 353 bits (907), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 224/523 (43%), Positives = 302/523 (58%), Gaps = 55/523 (10%)
Query 128 FGQNAPAIAALESLYECMWAQDAAAMAGYYVGASAVATQLASWLQRLQSIPGAASLDARL 187
+GQ AI+A VA + QRL + A
Sbjct 96 YGQQFQAISA------------------------QVAAFHNEFTQRLAAAANAFVNAEAT 131
Query 188 PSSA---EAPMGVVRAVNSAIAANAAAAQTVGLVMGGSGTPIPSARYVELANALYMSGSV 244
+SA EA G+ + + + Q ++MGG+G+PIP+ YV L++ V
Sbjct 132 NTSALVQEATAGLFKPTSPPVLP-PMFNQNTAIIMGGTGSPIPTPSYVNAITTLFIDPVV 190
Query 245 PGVIAQALFTPQGLYPVVVIKNLTFDSSVAQGAVILESAIRQQIAAGNNVTVFGYSQSAT 304
+ +AL TP+ LYP+ +K+L F +SV G IL+ AI +QI AGN+VTVFGYSQSA
Sbjct 191 SNPVVKALVTPEELYPITGVKSLPFQTSVQLGLQILDGAIWEQINAGNHVTVFGYSQSAV 250
Query 305 ISSLVMANLAA-SADPPSPDELSFTLIGNPNNPNGGVATRFPGISFPSLGVTATGATPHN 363
I+SL M +L + + PSP +L+F LIGN NPNGG+ R PG++ +LG+ GATP N
Sbjct 251 IASLEMQHLISLGPNAPSPSQLNFILIGNEMNPNGGILARIPGLNVTTLGLPFYGATPDN 310
Query 364 LYPTKIYTIEYDGVADFPRYPLNFVSTLNAIAGTYYVHSNYFILTPEQIDAAVPLTNTVG 423
YPT YT+EYDG ADFPRYPLN +S +NA+ G VH+ Y LTP QI +A L T G
Sbjct 311 PYPTTTYTLEYDGFADFPRYPLNVLSDINAVFGILTVHTTYADLTPAQIASATQLP-TQG 369
Query 424 PTMTQYYIIRTENLPLLEPLRSVPIVGNPLANLVQPNLKVIVNLGYGDPAYGYSTSPPNV 483
T YYII TE+LPLL PLR++P++G PLA LV+PNL+VIVNLGYGDP +GYSTSP NV
Sbjct 370 TTSNTYYIIETEHLPLLAPLRAIPVIGPPLAALVEPNLEVIVNLGYGDPRFGYSTSPANV 429
Query 484 ATPFGLFPEVSPVVIADALVAGTQQGIGDFAYDVSHLELPLPADGSTMPSTAPGSGTPVP 543
TPFGLFP+V V+ADALVAGTQQG+ DF + LPA +T+P TP+P
Sbjct 430 PTPFGLFPDVPASVVADALVAGTQQGVNDFMVE-------LPAALNTLPQ------TPMP 476
Query 544 PLSIDSLIDDLQVANR------NLANTISKVAATSYATVLPTADIANAALTIVPSYNIHL 597
N+A+T + V +T Y+ +LPTAD+ A +TI+P+Y++ L
Sbjct 477 AFPPYVPTLLPPPPPPQLATLINIADTFASVVSTGYSILLPTADLGLAFVTILPAYDLTL 536
Query 598 FLEGIQQALKGDPMGLVNAVGYPLAADVALFTAAGGLQLLIII 640
F + Q G+ L A+ PLAA + L G ++ + I+
Sbjct 537 F---VNQLAAGN---LRAAIELPLAATIGLAALGGMIEFIAIV 573
>gi|57116694|ref|YP_177695.1| PE family protein [Mycobacterium tuberculosis H37Rv]
gi|148659915|ref|YP_001281438.1| PE family protein [Mycobacterium tuberculosis H37Ra]
gi|148821343|ref|YP_001286097.1| PE family protein [Mycobacterium tuberculosis F11]
25 more sequence titles
Length=588
Score = 353 bits (907), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 224/523 (43%), Positives = 302/523 (58%), Gaps = 55/523 (10%)
Query 128 FGQNAPAIAALESLYECMWAQDAAAMAGYYVGASAVATQLASWLQRLQSIPGAASLDARL 187
+GQ AI+A VA + QRL + A
Sbjct 96 YGQQFQAISA------------------------QVAAFHNEFTQRLAAAANAFVNAEAT 131
Query 188 PSSA---EAPMGVVRAVNSAIAANAAAAQTVGLVMGGSGTPIPSARYVELANALYMSGSV 244
+SA EA G+ + + + Q ++MGG+G+PIP+ YV L++ V
Sbjct 132 NTSALVQEATAGLFKPTSPPVLP-PMFNQNTAIIMGGTGSPIPTPSYVNAITTLFIDPVV 190
Query 245 PGVIAQALFTPQGLYPVVVIKNLTFDSSVAQGAVILESAIRQQIAAGNNVTVFGYSQSAT 304
+ +AL TP+ LYP+ +K+L F +SV G IL+ AI +QI AGN+VTVFGYSQSA
Sbjct 191 SNPVVKALVTPEELYPITGVKSLPFQTSVQLGLQILDGAIWEQINAGNHVTVFGYSQSAV 250
Query 305 ISSLVMANLAA-SADPPSPDELSFTLIGNPNNPNGGVATRFPGISFPSLGVTATGATPHN 363
I+SL M +L + + PSP +L+F LIGN NPNGG+ R PG++ +LG+ GATP N
Sbjct 251 IASLEMQHLISLGPNAPSPSQLNFILIGNEMNPNGGILARIPGLNVTTLGLPFYGATPDN 310
Query 364 LYPTKIYTIEYDGVADFPRYPLNFVSTLNAIAGTYYVHSNYFILTPEQIDAAVPLTNTVG 423
YPT YT+EYDG ADFPRYPLN +S +NA+ G VH+ Y LTP QI +A L T G
Sbjct 311 PYPTTTYTLEYDGFADFPRYPLNVLSDINAVFGILTVHTTYADLTPAQIASATQLP-TQG 369
Query 424 PTMTQYYIIRTENLPLLEPLRSVPIVGNPLANLVQPNLKVIVNLGYGDPAYGYSTSPPNV 483
T YYII TE+LPLL PLR++P++G PLA LV+PNL+VIVNLGYGDP +GYSTSP NV
Sbjct 370 TTSNTYYIIETEHLPLLAPLRAIPVIGPPLAALVEPNLEVIVNLGYGDPRFGYSTSPANV 429
Query 484 ATPFGLFPEVSPVVIADALVAGTQQGIGDFAYDVSHLELPLPADGSTMPSTAPGSGTPVP 543
TPFGLFP+V V+ADALVAGTQQG+ DF + LPA +T+P TP+P
Sbjct 430 PTPFGLFPDVPASVVADALVAGTQQGVNDFMVE-------LPAALNTLPQ------TPMP 476
Query 544 PLSIDSLIDDLQVANR------NLANTISKVAATSYATVLPTADIANAALTIVPSYNIHL 597
N+A+T + V +T Y+ +LPTAD+ A +TI+P+Y++ L
Sbjct 477 AFPPYVPTLLPPPPPPQPATLINIADTFASVVSTGYSILLPTADLGLAFVTILPAYDLTL 536
Query 598 FLEGIQQALKGDPMGLVNAVGYPLAADVALFTAAGGLQLLIII 640
F + Q G+ L A+ PLAA + L G ++ + I+
Sbjct 537 F---VNQLAAGN---LRAAIELPLAATIGLAALGGMIEFIAIV 573
>gi|308231479|ref|ZP_07412575.2| PE family protein [Mycobacterium tuberculosis SUMu001]
gi|308379707|ref|ZP_07487233.2| PE family protein [Mycobacterium tuberculosis SUMu010]
gi|308380909|ref|ZP_07491451.2| PE family protein [Mycobacterium tuberculosis SUMu011]
7 more sequence titles
Length=560
Score = 353 bits (907), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 224/523 (43%), Positives = 302/523 (58%), Gaps = 55/523 (10%)
Query 128 FGQNAPAIAALESLYECMWAQDAAAMAGYYVGASAVATQLASWLQRLQSIPGAASLDARL 187
+GQ AI+A VA + QRL + A
Sbjct 68 YGQQFQAISA------------------------QVAAFHNEFTQRLAAAANAFVNAEAT 103
Query 188 PSSA---EAPMGVVRAVNSAIAANAAAAQTVGLVMGGSGTPIPSARYVELANALYMSGSV 244
+SA EA G+ + + + Q ++MGG+G+PIP+ YV L++ V
Sbjct 104 NTSALVQEATAGLFKPTSPPVLP-PMFNQNTAIIMGGTGSPIPTPSYVNAITTLFIDPVV 162
Query 245 PGVIAQALFTPQGLYPVVVIKNLTFDSSVAQGAVILESAIRQQIAAGNNVTVFGYSQSAT 304
+ +AL TP+ LYP+ +K+L F +SV G IL+ AI +QI AGN+VTVFGYSQSA
Sbjct 163 SNPVVKALVTPEELYPITGVKSLPFQTSVQLGLQILDGAIWEQINAGNHVTVFGYSQSAV 222
Query 305 ISSLVMANLAA-SADPPSPDELSFTLIGNPNNPNGGVATRFPGISFPSLGVTATGATPHN 363
I+SL M +L + + PSP +L+F LIGN NPNGG+ R PG++ +LG+ GATP N
Sbjct 223 IASLEMQHLISLGPNAPSPSQLNFILIGNEMNPNGGILARIPGLNVTTLGLPFYGATPDN 282
Query 364 LYPTKIYTIEYDGVADFPRYPLNFVSTLNAIAGTYYVHSNYFILTPEQIDAAVPLTNTVG 423
YPT YT+EYDG ADFPRYPLN +S +NA+ G VH+ Y LTP QI +A L T G
Sbjct 283 PYPTTTYTLEYDGFADFPRYPLNVLSDINAVFGILTVHTTYADLTPAQIASATQLP-TQG 341
Query 424 PTMTQYYIIRTENLPLLEPLRSVPIVGNPLANLVQPNLKVIVNLGYGDPAYGYSTSPPNV 483
T YYII TE+LPLL PLR++P++G PLA LV+PNL+VIVNLGYGDP +GYSTSP NV
Sbjct 342 TTSNTYYIIETEHLPLLAPLRAIPVIGPPLAALVEPNLEVIVNLGYGDPRFGYSTSPANV 401
Query 484 ATPFGLFPEVSPVVIADALVAGTQQGIGDFAYDVSHLELPLPADGSTMPSTAPGSGTPVP 543
TPFGLFP+V V+ADALVAGTQQG+ DF + LPA +T+P TP+P
Sbjct 402 PTPFGLFPDVPASVVADALVAGTQQGVNDFMVE-------LPAALNTLPQ------TPMP 448
Query 544 PLSIDSLIDDLQVANR------NLANTISKVAATSYATVLPTADIANAALTIVPSYNIHL 597
N+A+T + V +T Y+ +LPTAD+ A +TI+P+Y++ L
Sbjct 449 AFPPYVPTLLPPPPPPQPATLINIADTFASVVSTGYSILLPTADLGLAFVTILPAYDLTL 508
Query 598 FLEGIQQALKGDPMGLVNAVGYPLAADVALFTAAGGLQLLIII 640
F + Q G+ L A+ PLAA + L G ++ + I+
Sbjct 509 F---VNQLAAGN---LRAAIELPLAATIGLAALGGMIEFIAIV 545
>gi|308369315|ref|ZP_07417319.2| PE family protein [Mycobacterium tuberculosis SUMu002]
gi|308370327|ref|ZP_07421092.2| PE family protein [Mycobacterium tuberculosis SUMu003]
gi|308371602|ref|ZP_07425459.2| PE family protein [Mycobacterium tuberculosis SUMu004]
9 more sequence titles
Length=560
Score = 351 bits (901), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 224/523 (43%), Positives = 301/523 (58%), Gaps = 55/523 (10%)
Query 128 FGQNAPAIAALESLYECMWAQDAAAMAGYYVGASAVATQLASWLQRLQSIPGAASLDARL 187
+GQ AI+A VA + QRL + A
Sbjct 68 YGQQFQAISA------------------------QVAAFHNEFTQRLAAAANAFVNAEAT 103
Query 188 PSSA---EAPMGVVRAVNSAIAANAAAAQTVGLVMGGSGTPIPSARYVELANALYMSGSV 244
+SA EA G+ + + + Q ++MGG+G+PIP+ YV L++ V
Sbjct 104 NTSALVQEATAGLFKPTSPPVLP-PMFNQNTAIIMGGTGSPIPTPSYVNAITTLFIDPVV 162
Query 245 PGVIAQALFTPQGLYPVVVIKNLTFDSSVAQGAVILESAIRQQIAAGNNVTVFGYSQSAT 304
+ +AL TP+ LYP+ +K+L F +SV G IL+ AI +QI AGN+VTVFGYSQSA
Sbjct 163 SNPVVKALVTPEELYPITGVKSLPFQTSVQLGLQILDGAIWEQINAGNHVTVFGYSQSAV 222
Query 305 ISSLVMANLAA-SADPPSPDELSFTLIGNPNNPNGGVATRFPGISFPSLGVTATGATPHN 363
I+SL M +L + + PSP +L+F LIGN NPNGG+ R PG++ +LG+ GATP N
Sbjct 223 IASLEMQHLISLGPNAPSPSQLNFILIGNEMNPNGGILARIPGLNVTTLGLPFYGATPDN 282
Query 364 LYPTKIYTIEYDGVADFPRYPLNFVSTLNAIAGTYYVHSNYFILTPEQIDAAVPLTNTVG 423
YPT YT+EYDG ADFPRYPLN +S NA+ G VH+ Y LTP QI +A L T G
Sbjct 283 PYPTTTYTLEYDGFADFPRYPLNVLSDSNAVFGILTVHTTYADLTPAQIASATQLP-TQG 341
Query 424 PTMTQYYIIRTENLPLLEPLRSVPIVGNPLANLVQPNLKVIVNLGYGDPAYGYSTSPPNV 483
T YYII TE+LPLL PLR++P++G PLA LV+PNL+VIVNLGYGDP +GYSTSP NV
Sbjct 342 TTSNTYYIIETEHLPLLAPLRAIPVIGPPLAALVEPNLEVIVNLGYGDPRFGYSTSPANV 401
Query 484 ATPFGLFPEVSPVVIADALVAGTQQGIGDFAYDVSHLELPLPADGSTMPSTAPGSGTPVP 543
TPFGLFP+V V+ADALVAGTQQG+ DF + LPA +T+P TP+P
Sbjct 402 PTPFGLFPDVPASVVADALVAGTQQGVNDFMVE-------LPAALNTLPQ------TPMP 448
Query 544 PLSIDSLIDDLQVANR------NLANTISKVAATSYATVLPTADIANAALTIVPSYNIHL 597
N+A+T + V +T Y+ +LPTAD+ A +TI+P+Y++ L
Sbjct 449 AFPPYVPTLLPPPPPPQPATLINIADTFASVVSTGYSILLPTADLGLAFVTILPAYDLTL 508
Query 598 FLEGIQQALKGDPMGLVNAVGYPLAADVALFTAAGGLQLLIII 640
F + Q G+ L A+ PLAA + L G ++ + I+
Sbjct 509 F---VNQLAAGN---LRAAIELPLAATIGLAALGGMIEFIAIV 545
>gi|306805944|ref|ZP_07442612.1| PE family protein [Mycobacterium tuberculosis SUMu007]
gi|306970340|ref|ZP_07483001.1| PE family protein [Mycobacterium tuberculosis SUMu009]
gi|308347554|gb|EFP36405.1| PE family protein [Mycobacterium tuberculosis SUMu007]
gi|308352180|gb|EFP41031.1| PE family protein [Mycobacterium tuberculosis SUMu009]
Length=588
Score = 351 bits (901), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 224/523 (43%), Positives = 301/523 (58%), Gaps = 55/523 (10%)
Query 128 FGQNAPAIAALESLYECMWAQDAAAMAGYYVGASAVATQLASWLQRLQSIPGAASLDARL 187
+GQ AI+A VA + QRL + A
Sbjct 96 YGQQFQAISA------------------------QVAAFHNEFTQRLAAAANAFVNAEAT 131
Query 188 PSSA---EAPMGVVRAVNSAIAANAAAAQTVGLVMGGSGTPIPSARYVELANALYMSGSV 244
+SA EA G+ + + + Q ++MGG+G+PIP+ YV L++ V
Sbjct 132 NTSALVQEATAGLFKPTSPPVLP-PMFNQNTAIIMGGTGSPIPTPSYVNAITTLFIDPVV 190
Query 245 PGVIAQALFTPQGLYPVVVIKNLTFDSSVAQGAVILESAIRQQIAAGNNVTVFGYSQSAT 304
+ +AL TP+ LYP+ +K+L F +SV G IL+ AI +QI AGN+VTVFGYSQSA
Sbjct 191 SNPVVKALVTPEELYPITGVKSLPFQTSVQLGLQILDGAIWEQINAGNHVTVFGYSQSAV 250
Query 305 ISSLVMANLAA-SADPPSPDELSFTLIGNPNNPNGGVATRFPGISFPSLGVTATGATPHN 363
I+SL M +L + + PSP +L+F LIGN NPNGG+ R PG++ +LG+ GATP N
Sbjct 251 IASLEMQHLISLGPNAPSPSQLNFILIGNEMNPNGGILARIPGLNVTTLGLPFYGATPDN 310
Query 364 LYPTKIYTIEYDGVADFPRYPLNFVSTLNAIAGTYYVHSNYFILTPEQIDAAVPLTNTVG 423
YPT YT+EYDG ADFPRYPLN +S NA+ G VH+ Y LTP QI +A L T G
Sbjct 311 PYPTTTYTLEYDGFADFPRYPLNVLSDSNAVFGILTVHTTYADLTPAQIASATQLP-TQG 369
Query 424 PTMTQYYIIRTENLPLLEPLRSVPIVGNPLANLVQPNLKVIVNLGYGDPAYGYSTSPPNV 483
T YYII TE+LPLL PLR++P++G PLA LV+PNL+VIVNLGYGDP +GYSTSP NV
Sbjct 370 TTSNTYYIIETEHLPLLAPLRAIPVIGPPLAALVEPNLEVIVNLGYGDPRFGYSTSPANV 429
Query 484 ATPFGLFPEVSPVVIADALVAGTQQGIGDFAYDVSHLELPLPADGSTMPSTAPGSGTPVP 543
TPFGLFP+V V+ADALVAGTQQG+ DF + LPA +T+P TP+P
Sbjct 430 PTPFGLFPDVPASVVADALVAGTQQGVNDFMVE-------LPAALNTLPQ------TPMP 476
Query 544 PLSIDSLIDDLQVANR------NLANTISKVAATSYATVLPTADIANAALTIVPSYNIHL 597
N+A+T + V +T Y+ +LPTAD+ A +TI+P+Y++ L
Sbjct 477 AFPPYVPTLLPPPPPPQPATLINIADTFASVVSTGYSILLPTADLGLAFVTILPAYDLTL 536
Query 598 FLEGIQQALKGDPMGLVNAVGYPLAADVALFTAAGGLQLLIII 640
F + Q G+ L A+ PLAA + L G ++ + I+
Sbjct 537 F---VNQLAAGN---LRAAIELPLAATIGLAALGGMIEFIAIV 573
>gi|339298365|gb|AEJ50475.1| PPE family protein [Mycobacterium tuberculosis CCDC5180]
Length=204
Score = 350 bits (899), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 171/173 (99%), Positives = 172/173 (99%), Gaps = 0/173 (0%)
Query 354 VTATGATPHNLYPTKIYTIEYDGVADFPRYPLNFVSTLNAIAGTYYVHSNYFILTPEQID 413
+TATGATPHNLYPTKIYTIEYDGVADFPRYPLNFVSTLNAIAGTYYVHSNYFILTPEQID
Sbjct 1 MTATGATPHNLYPTKIYTIEYDGVADFPRYPLNFVSTLNAIAGTYYVHSNYFILTPEQID 60
Query 414 AAVPLTNTVGPTMTQYYIIRTENLPLLEPLRSVPIVGNPLANLVQPNLKVIVNLGYGDPA 473
AAVPLTNTVGPTMTQYYIIRTENLPLLEPLRSVPIVGNPLANLVQPNLKVIVNLGYGDPA
Sbjct 61 AAVPLTNTVGPTMTQYYIIRTENLPLLEPLRSVPIVGNPLANLVQPNLKVIVNLGYGDPA 120
Query 474 YGYSTSPPNVATPFGLFPEVSPVVIADALVAGTQQGIGDFAYDVSHLELPLPA 526
YGYSTSPPNVATPFGLFPEVSPVVIADALVAGTQQGIGDFAYDVSHLELPLP
Sbjct 121 YGYSTSPPNVATPFGLFPEVSPVVIADALVAGTQQGIGDFAYDVSHLELPLPG 173
>gi|148821344|ref|YP_001286098.1| PE family protein [Mycobacterium tuberculosis F11]
gi|253797072|ref|YP_003030073.1| PE family protein [Mycobacterium tuberculosis KZN 1435]
gi|289552403|ref|ZP_06441613.1| PE family protein [Mycobacterium tuberculosis KZN 605]
gi|148719871|gb|ABR04496.1| PE family protein [Mycobacterium tuberculosis F11]
gi|253318575|gb|ACT23178.1| PE family protein [Mycobacterium tuberculosis KZN 1435]
gi|289437035|gb|EFD19528.1| PE family protein [Mycobacterium tuberculosis KZN 605]
gi|328456861|gb|AEB02284.1| PE family protein [Mycobacterium tuberculosis KZN 4207]
Length=533
Score = 347 bits (891), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 196/390 (51%), Positives = 257/390 (66%), Gaps = 20/390 (5%)
Query 250 QALFTPQGLYPVVVIKNLTFDSSVAQGAVILESAIRQQIAA-GNNVTVFGYSQSATISSL 308
QA+FTP+ LYP+ +++L ++SV +G IL AI ++A GN VTVFG+SQSA I+SL
Sbjct 120 QAVFTPEELYPLTGVRSLVLNTSVEEGLTILHDAIMVELATTGNAVTVFGWSQSAIIASL 179
Query 309 VMANLAASADP-PSPDELSFTLIGNPNNPNGGVATRFPGISFPSLGVTATGATPHN-LYP 366
M A PS +L+F L+GN NPNGG+ RFP ++ P+L +T GATP + +YP
Sbjct 180 EMQRFTAMGGAAPSASDLNFVLVGNEMNPNGGMLARFPDLTLPTLDLTFYGATPSDTIYP 239
Query 367 TKIYTIEYDGVADFPRYPLNFVSTLNAIAGTYYVHSNYFILTPEQIDAAVPLTNTVGPT- 425
T IYT+EYDG ADF RYPLNF+S LNA+AG +VH+ Y LTP Q++ A L + G T
Sbjct 240 TAIYTLEYDGFADFSRYPLNFISDLNAVAGITFVHTKYLDLTPAQVEGATKLPTSPGYTE 299
Query 426 MTQYYIIRTENLPLLEPLRSVPIVGNPLANLVQPNLKVIVNLGYGDPAYGYSTSPPNVAT 485
+T YYIIRTEN PLL+PLR+VP++G+PLA+L+QPNLKVIVNLGYGDP YGYSTS +V T
Sbjct 300 VTDYYIIRTENRPLLQPLRAVPVIGDPLADLIQPNLKVIVNLGYGDPNYGYSTSYADVRT 359
Query 486 PFGLFPEVSPVVIADALVAGTQQGIGDFAYDVSHLELPLPADGSTMPSTAPGSGTPVPPL 545
PFGL+P V P VIADAL AGTQ+GI DF D+ L S P T P +P
Sbjct 360 PFGLWPNVPPQVIADALAAGTQEGILDFTADLQAL--------SAQPLTLP--QIQLPQP 409
Query 546 SIDSLIDDLQVANRNLANTISKVAATSYATVLPTADIANAALTIVPSYNIHLFLEGIQQA 605
+ + NT++++ +T+YA +LPT DIA A +T +P Y LF ++Q
Sbjct 410 ADLVAAVAAAPTPAEVVNTLARIISTNYAVLLPTVDIALALVTTLPLYTTQLF---VRQL 466
Query 606 LKGDPMGLVNAVGYPLAADVALFTAAGGLQ 635
G+ L+NA+GYPLAA V L T G +
Sbjct 467 AAGN---LINAIGYPLAATVGLGTIDSGRR 493
>gi|15839534|ref|NP_334571.1| PE family protein [Mycobacterium tuberculosis CDC1551]
gi|254366604|ref|ZP_04982648.1| PE family protein [Mycobacterium tuberculosis str. Haarlem]
gi|289747919|ref|ZP_06507297.1| PE family protein [Mycobacterium tuberculosis 02_1987]
13 more sequence titles
Length=533
Score = 347 bits (891), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 196/390 (51%), Positives = 257/390 (66%), Gaps = 20/390 (5%)
Query 250 QALFTPQGLYPVVVIKNLTFDSSVAQGAVILESAIRQQIAA-GNNVTVFGYSQSATISSL 308
QA+FTP+ LYP+ +++L ++SV +G IL AI ++A GN VTVFG+SQSA I+SL
Sbjct 120 QAVFTPEELYPLTGVRSLVLNTSVEEGLTILHDAIMVELATTGNAVTVFGWSQSAIIASL 179
Query 309 VMANLAASADP-PSPDELSFTLIGNPNNPNGGVATRFPGISFPSLGVTATGATPHN-LYP 366
M A PS +L+F L+GN NPNGG+ RFP ++ P+L +T GATP + +YP
Sbjct 180 EMQRFTAMGGAAPSASDLNFVLVGNEMNPNGGMLARFPDLTLPTLDLTFYGATPSDTIYP 239
Query 367 TKIYTIEYDGVADFPRYPLNFVSTLNAIAGTYYVHSNYFILTPEQIDAAVPLTNTVGPT- 425
T IYT+EYDG ADF RYPLNF+S LNA+AG +VH+ Y LTP Q++ A L + G T
Sbjct 240 TAIYTLEYDGFADFSRYPLNFISDLNAVAGITFVHTKYLDLTPAQVEGATKLPTSPGYTG 299
Query 426 MTQYYIIRTENLPLLEPLRSVPIVGNPLANLVQPNLKVIVNLGYGDPAYGYSTSPPNVAT 485
+T YYIIRTEN PLL+PLR+VP++G+PLA+L+QPNLKVIVNLGYGDP YGYSTS +V T
Sbjct 300 VTDYYIIRTENRPLLQPLRAVPVIGDPLADLIQPNLKVIVNLGYGDPNYGYSTSYADVRT 359
Query 486 PFGLFPEVSPVVIADALVAGTQQGIGDFAYDVSHLELPLPADGSTMPSTAPGSGTPVPPL 545
PFGL+P V P VIADAL AGTQ+GI DF D+ L S P T P +P
Sbjct 360 PFGLWPNVPPQVIADALAAGTQEGILDFTADLQAL--------SAQPLTLP--QIQLPQP 409
Query 546 SIDSLIDDLQVANRNLANTISKVAATSYATVLPTADIANAALTIVPSYNIHLFLEGIQQA 605
+ + NT++++ +T+YA +LPT DIA A +T +P Y LF ++Q
Sbjct 410 ADLVAAVAAAPTPAEVVNTLARIISTNYAVLLPTVDIALALVTTLPLYTTQLF---VRQL 466
Query 606 LKGDPMGLVNAVGYPLAADVALFTAAGGLQ 635
G+ L+NA+GYPLAA V L T G +
Sbjct 467 AAGN---LINAIGYPLAATVGLGTIDSGRR 493
>gi|289441524|ref|ZP_06431268.1| LOW QUALITY PROTEIN: PE family protein [Mycobacterium tuberculosis
T46]
gi|289414443|gb|EFD11683.1| LOW QUALITY PROTEIN: PE family protein [Mycobacterium tuberculosis
T46]
Length=532
Score = 347 bits (891), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 196/390 (51%), Positives = 257/390 (66%), Gaps = 20/390 (5%)
Query 250 QALFTPQGLYPVVVIKNLTFDSSVAQGAVILESAIRQQIAA-GNNVTVFGYSQSATISSL 308
QA+FTP+ LYP+ +++L ++SV +G IL AI ++A GN VTVFG+SQSA I+SL
Sbjct 119 QAVFTPEELYPLTGVRSLVLNTSVEEGLTILHDAIMVELATTGNAVTVFGWSQSAIIASL 178
Query 309 VMANLAASADP-PSPDELSFTLIGNPNNPNGGVATRFPGISFPSLGVTATGATPHN-LYP 366
M A PS +L+F L+GN NPNGG+ RFP ++ P+L +T GATP + +YP
Sbjct 179 EMQRFTAMGGAAPSASDLNFVLVGNEMNPNGGMLARFPDLTLPTLDLTFYGATPSDTIYP 238
Query 367 TKIYTIEYDGVADFPRYPLNFVSTLNAIAGTYYVHSNYFILTPEQIDAAVPLTNTVGPT- 425
T IYT+EYDG ADF RYPLNF+S LNA+AG +VH+ Y LTP Q++ A L + G T
Sbjct 239 TAIYTLEYDGFADFSRYPLNFISDLNAVAGITFVHTKYLDLTPAQVEGATKLPTSPGYTG 298
Query 426 MTQYYIIRTENLPLLEPLRSVPIVGNPLANLVQPNLKVIVNLGYGDPAYGYSTSPPNVAT 485
+T YYIIRTEN PLL+PLR+VP++G+PLA+L+QPNLKVIVNLGYGDP YGYSTS +V T
Sbjct 299 VTDYYIIRTENRPLLQPLRAVPVIGDPLADLIQPNLKVIVNLGYGDPNYGYSTSYADVRT 358
Query 486 PFGLFPEVSPVVIADALVAGTQQGIGDFAYDVSHLELPLPADGSTMPSTAPGSGTPVPPL 545
PFGL+P V P VIADAL AGTQ+GI DF D+ L S P T P +P
Sbjct 359 PFGLWPNVPPQVIADALAAGTQEGILDFTADLQAL--------SAQPLTLP--QIQLPQP 408
Query 546 SIDSLIDDLQVANRNLANTISKVAATSYATVLPTADIANAALTIVPSYNIHLFLEGIQQA 605
+ + NT++++ +T+YA +LPT DIA A +T +P Y LF ++Q
Sbjct 409 ADLVAAVAAAPTPAEVVNTLARIISTNYAVLLPTVDIALALVTTLPLYTTQLF---VRQL 465
Query 606 LKGDPMGLVNAVGYPLAADVALFTAAGGLQ 635
G+ L+NA+GYPLAA V L T G +
Sbjct 466 AAGN---LINAIGYPLAATVGLGTIDSGRR 492
>gi|289764268|ref|ZP_06523646.1| PE family protein [Mycobacterium tuberculosis GM 1503]
gi|289711774|gb|EFD75790.1| PE family protein [Mycobacterium tuberculosis GM 1503]
gi|344217971|gb|AEM98601.1| PE family protein [Mycobacterium tuberculosis CTRI-2]
Length=525
Score = 347 bits (891), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 196/390 (51%), Positives = 257/390 (66%), Gaps = 20/390 (5%)
Query 250 QALFTPQGLYPVVVIKNLTFDSSVAQGAVILESAIRQQIAA-GNNVTVFGYSQSATISSL 308
QA+FTP+ LYP+ +++L ++SV +G IL AI ++A GN VTVFG+SQSA I+SL
Sbjct 112 QAVFTPEELYPLTGVRSLVLNTSVEEGLTILHDAIMVELATTGNAVTVFGWSQSAIIASL 171
Query 309 VMANLAASADP-PSPDELSFTLIGNPNNPNGGVATRFPGISFPSLGVTATGATPHN-LYP 366
M A PS +L+F L+GN NPNGG+ RFP ++ P+L +T GATP + +YP
Sbjct 172 EMQRFTAMGGAAPSASDLNFVLVGNEMNPNGGMLARFPDLTLPTLDLTFYGATPSDTIYP 231
Query 367 TKIYTIEYDGVADFPRYPLNFVSTLNAIAGTYYVHSNYFILTPEQIDAAVPLTNTVGPT- 425
T IYT+EYDG ADF RYPLNF+S LNA+AG +VH+ Y LTP Q++ A L + G T
Sbjct 232 TAIYTLEYDGFADFSRYPLNFISDLNAVAGITFVHTKYLDLTPAQVEGATKLPTSPGYTE 291
Query 426 MTQYYIIRTENLPLLEPLRSVPIVGNPLANLVQPNLKVIVNLGYGDPAYGYSTSPPNVAT 485
+T YYIIRTEN PLL+PLR+VP++G+PLA+L+QPNLKVIVNLGYGDP YGYSTS +V T
Sbjct 292 VTDYYIIRTENRPLLQPLRAVPVIGDPLADLIQPNLKVIVNLGYGDPNYGYSTSYADVRT 351
Query 486 PFGLFPEVSPVVIADALVAGTQQGIGDFAYDVSHLELPLPADGSTMPSTAPGSGTPVPPL 545
PFGL+P V P VIADAL AGTQ+GI DF D+ L S P T P +P
Sbjct 352 PFGLWPNVPPQVIADALAAGTQEGILDFTADLQAL--------SAQPLTLP--QIQLPQP 401
Query 546 SIDSLIDDLQVANRNLANTISKVAATSYATVLPTADIANAALTIVPSYNIHLFLEGIQQA 605
+ + NT++++ +T+YA +LPT DIA A +T +P Y LF ++Q
Sbjct 402 ADLVAAVAAAPTPAEVVNTLARIISTNYAVLLPTVDIALALVTTLPLYTTQLF---VRQL 458
Query 606 LKGDPMGLVNAVGYPLAADVALFTAAGGLQ 635
G+ L+NA+GYPLAA V L T G +
Sbjct 459 AAGN---LINAIGYPLAATVGLGTIDSGRR 485
>gi|31791330|ref|NP_853823.1| PE family protein [Mycobacterium bovis AF2122/97]
gi|57116695|ref|YP_177696.1| PE family protein [Mycobacterium tuberculosis H37Rv]
gi|121636064|ref|YP_976287.1| PE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
28 more sequence titles
Length=525
Score = 347 bits (891), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 196/390 (51%), Positives = 257/390 (66%), Gaps = 20/390 (5%)
Query 250 QALFTPQGLYPVVVIKNLTFDSSVAQGAVILESAIRQQIAA-GNNVTVFGYSQSATISSL 308
QA+FTP+ LYP+ +++L ++SV +G IL AI ++A GN VTVFG+SQSA I+SL
Sbjct 112 QAVFTPEELYPLTGVRSLVLNTSVEEGLTILHDAIMVELATTGNAVTVFGWSQSAIIASL 171
Query 309 VMANLAASADP-PSPDELSFTLIGNPNNPNGGVATRFPGISFPSLGVTATGATPHN-LYP 366
M A PS +L+F L+GN NPNGG+ RFP ++ P+L +T GATP + +YP
Sbjct 172 EMQRFTAMGGAAPSASDLNFVLVGNEMNPNGGMLARFPDLTLPTLDLTFYGATPSDTIYP 231
Query 367 TKIYTIEYDGVADFPRYPLNFVSTLNAIAGTYYVHSNYFILTPEQIDAAVPLTNTVGPT- 425
T IYT+EYDG ADF RYPLNF+S LNA+AG +VH+ Y LTP Q++ A L + G T
Sbjct 232 TAIYTLEYDGFADFSRYPLNFISDLNAVAGITFVHTKYLDLTPAQVEGATKLPTSPGYTG 291
Query 426 MTQYYIIRTENLPLLEPLRSVPIVGNPLANLVQPNLKVIVNLGYGDPAYGYSTSPPNVAT 485
+T YYIIRTEN PLL+PLR+VP++G+PLA+L+QPNLKVIVNLGYGDP YGYSTS +V T
Sbjct 292 VTDYYIIRTENRPLLQPLRAVPVIGDPLADLIQPNLKVIVNLGYGDPNYGYSTSYADVRT 351
Query 486 PFGLFPEVSPVVIADALVAGTQQGIGDFAYDVSHLELPLPADGSTMPSTAPGSGTPVPPL 545
PFGL+P V P VIADAL AGTQ+GI DF D+ L S P T P +P
Sbjct 352 PFGLWPNVPPQVIADALAAGTQEGILDFTADLQAL--------SAQPLTLP--QIQLPQP 401
Query 546 SIDSLIDDLQVANRNLANTISKVAATSYATVLPTADIANAALTIVPSYNIHLFLEGIQQA 605
+ + NT++++ +T+YA +LPT DIA A +T +P Y LF ++Q
Sbjct 402 ADLVAAVAAAPTPAEVVNTLARIISTNYAVLLPTVDIALALVTTLPLYTTQLF---VRQL 458
Query 606 LKGDPMGLVNAVGYPLAADVALFTAAGGLQ 635
G+ L+NA+GYPLAA V L T G +
Sbjct 459 AAGN---LINAIGYPLAATVGLGTIDSGRR 485
>gi|254549087|ref|ZP_05139534.1| PE family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
gi|297632626|ref|ZP_06950406.1| PE family protein [Mycobacterium tuberculosis KZN 4207]
gi|297729601|ref|ZP_06958719.1| PE family protein [Mycobacterium tuberculosis KZN R506]
gi|313656928|ref|ZP_07813808.1| PE family protein [Mycobacterium tuberculosis KZN V2475]
Length=490
Score = 347 bits (889), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 196/390 (51%), Positives = 257/390 (66%), Gaps = 20/390 (5%)
Query 250 QALFTPQGLYPVVVIKNLTFDSSVAQGAVILESAIRQQIAA-GNNVTVFGYSQSATISSL 308
QA+FTP+ LYP+ +++L ++SV +G IL AI ++A GN VTVFG+SQSA I+SL
Sbjct 77 QAVFTPEELYPLTGVRSLVLNTSVEEGLTILHDAIMVELATTGNAVTVFGWSQSAIIASL 136
Query 309 VMANLAASADP-PSPDELSFTLIGNPNNPNGGVATRFPGISFPSLGVTATGATPHN-LYP 366
M A PS +L+F L+GN NPNGG+ RFP ++ P+L +T GATP + +YP
Sbjct 137 EMQRFTAMGGAAPSASDLNFVLVGNEMNPNGGMLARFPDLTLPTLDLTFYGATPSDTIYP 196
Query 367 TKIYTIEYDGVADFPRYPLNFVSTLNAIAGTYYVHSNYFILTPEQIDAAVPLTNTVGPT- 425
T IYT+EYDG ADF RYPLNF+S LNA+AG +VH+ Y LTP Q++ A L + G T
Sbjct 197 TAIYTLEYDGFADFSRYPLNFISDLNAVAGITFVHTKYLDLTPAQVEGATKLPTSPGYTE 256
Query 426 MTQYYIIRTENLPLLEPLRSVPIVGNPLANLVQPNLKVIVNLGYGDPAYGYSTSPPNVAT 485
+T YYIIRTEN PLL+PLR+VP++G+PLA+L+QPNLKVIVNLGYGDP YGYSTS +V T
Sbjct 257 VTDYYIIRTENRPLLQPLRAVPVIGDPLADLIQPNLKVIVNLGYGDPNYGYSTSYADVRT 316
Query 486 PFGLFPEVSPVVIADALVAGTQQGIGDFAYDVSHLELPLPADGSTMPSTAPGSGTPVPPL 545
PFGL+P V P VIADAL AGTQ+GI DF D+ L S P T P +P
Sbjct 317 PFGLWPNVPPQVIADALAAGTQEGILDFTADLQAL--------SAQPLTLP--QIQLPQP 366
Query 546 SIDSLIDDLQVANRNLANTISKVAATSYATVLPTADIANAALTIVPSYNIHLFLEGIQQA 605
+ + NT++++ +T+YA +LPT DIA A +T +P Y LF ++Q
Sbjct 367 ADLVAAVAAAPTPAEVVNTLARIISTNYAVLLPTVDIALALVTTLPLYTTQLF---VRQL 423
Query 606 LKGDPMGLVNAVGYPLAADVALFTAAGGLQ 635
G+ L+NA+GYPLAA V L T G +
Sbjct 424 AAGN---LINAIGYPLAATVGLGTIDSGRR 450
>gi|167970270|ref|ZP_02552547.1| PE family protein [Mycobacterium tuberculosis H37Ra]
gi|294994623|ref|ZP_06800314.1| PE family protein [Mycobacterium tuberculosis 210]
gi|306774239|ref|ZP_07412576.1| PE-PPE domain protein [Mycobacterium tuberculosis SUMu001]
7 more sequence titles
Length=490
Score = 347 bits (889), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 196/390 (51%), Positives = 257/390 (66%), Gaps = 20/390 (5%)
Query 250 QALFTPQGLYPVVVIKNLTFDSSVAQGAVILESAIRQQIAA-GNNVTVFGYSQSATISSL 308
QA+FTP+ LYP+ +++L ++SV +G IL AI ++A GN VTVFG+SQSA I+SL
Sbjct 77 QAVFTPEELYPLTGVRSLVLNTSVEEGLTILHDAIMVELATTGNAVTVFGWSQSAIIASL 136
Query 309 VMANLAASADP-PSPDELSFTLIGNPNNPNGGVATRFPGISFPSLGVTATGATPHN-LYP 366
M A PS +L+F L+GN NPNGG+ RFP ++ P+L +T GATP + +YP
Sbjct 137 EMQRFTAMGGAAPSASDLNFVLVGNEMNPNGGMLARFPDLTLPTLDLTFYGATPSDTIYP 196
Query 367 TKIYTIEYDGVADFPRYPLNFVSTLNAIAGTYYVHSNYFILTPEQIDAAVPLTNTVGPT- 425
T IYT+EYDG ADF RYPLNF+S LNA+AG +VH+ Y LTP Q++ A L + G T
Sbjct 197 TAIYTLEYDGFADFSRYPLNFISDLNAVAGITFVHTKYLDLTPAQVEGATKLPTSPGYTG 256
Query 426 MTQYYIIRTENLPLLEPLRSVPIVGNPLANLVQPNLKVIVNLGYGDPAYGYSTSPPNVAT 485
+T YYIIRTEN PLL+PLR+VP++G+PLA+L+QPNLKVIVNLGYGDP YGYSTS +V T
Sbjct 257 VTDYYIIRTENRPLLQPLRAVPVIGDPLADLIQPNLKVIVNLGYGDPNYGYSTSYADVRT 316
Query 486 PFGLFPEVSPVVIADALVAGTQQGIGDFAYDVSHLELPLPADGSTMPSTAPGSGTPVPPL 545
PFGL+P V P VIADAL AGTQ+GI DF D+ L S P T P +P
Sbjct 317 PFGLWPNVPPQVIADALAAGTQEGILDFTADLQAL--------SAQPLTLP--QIQLPQP 366
Query 546 SIDSLIDDLQVANRNLANTISKVAATSYATVLPTADIANAALTIVPSYNIHLFLEGIQQA 605
+ + NT++++ +T+YA +LPT DIA A +T +P Y LF ++Q
Sbjct 367 ADLVAAVAAAPTPAEVVNTLARIISTNYAVLLPTVDIALALVTTLPLYTTQLF---VRQL 423
Query 606 LKGDPMGLVNAVGYPLAADVALFTAAGGLQ 635
G+ L+NA+GYPLAA V L T G +
Sbjct 424 AAGN---LINAIGYPLAATVGLGTIDSGRR 450
>gi|339293217|gb|AEJ45328.1| PE family protein [Mycobacterium tuberculosis CCDC5079]
Length=490
Score = 345 bits (885), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 195/390 (50%), Positives = 256/390 (66%), Gaps = 20/390 (5%)
Query 250 QALFTPQGLYPVVVIKNLTFDSSVAQGAVILESAIRQQIAA-GNNVTVFGYSQSATISSL 308
QA+FTP+ LYP+ +++L ++SV +G IL AI ++A GN VTVFG+SQSA I+SL
Sbjct 77 QAVFTPEELYPLTGVRSLVLNTSVEEGLTILHDAIMVELATTGNAVTVFGWSQSAIIASL 136
Query 309 VMANLAASADP-PSPDELSFTLIGNPNNPNGGVATRFPGISFPSLGVTATGATPHN-LYP 366
M A PS +L+F L+GN NPNGG+ RFP ++ P+L +T GATP + +YP
Sbjct 137 EMQRFTAMGGAAPSASDLNFVLVGNEMNPNGGMLARFPDLTLPTLDLTFYGATPSDTIYP 196
Query 367 TKIYTIEYDGVADFPRYPLNFVSTLNAIAGTYYVHSNYFILTPEQIDAAVPLTNTVGPT- 425
T IYT+EYDG ADF RYPLNF+S LNA+AG +VH+ Y LTP Q++ A L + G T
Sbjct 197 TAIYTLEYDGFADFSRYPLNFISDLNAVAGITFVHTKYLDLTPAQVEGATKLPTSPGYTG 256
Query 426 MTQYYIIRTENLPLLEPLRSVPIVGNPLANLVQPNLKVIVNLGYGDPAYGYSTSPPNVAT 485
+T YYIIRTEN PLL+PLR+VP++G+PLA+L+QPNLKVIVNLGYGDP YGYSTS +V T
Sbjct 257 VTDYYIIRTENRPLLQPLRAVPVIGDPLADLIQPNLKVIVNLGYGDPNYGYSTSYADVRT 316
Query 486 PFGLFPEVSPVVIADALVAGTQQGIGDFAYDVSHLELPLPADGSTMPSTAPGSGTPVPPL 545
PFGL+P V P VIADAL AGTQ+GI DF D+ L S P T P +P
Sbjct 317 PFGLWPNVPPQVIADALAAGTQEGILDFTADLQAL--------SAQPLTLP--QIQLPQP 366
Query 546 SIDSLIDDLQVANRNLANTISKVAATSYATVLPTADIANAALTIVPSYNIHLFLEGIQQA 605
+ + NT++++ +T+YA +LPT DIA +T +P Y LF ++Q
Sbjct 367 ADLVAAVAAAPTPAEVVNTLARIISTNYAVLLPTVDIALGLVTTLPLYTTQLF---VRQL 423
Query 606 LKGDPMGLVNAVGYPLAADVALFTAAGGLQ 635
G+ L+NA+GYPLAA V L T G +
Sbjct 424 AAGN---LINAIGYPLAATVGLGTIDSGRR 450
>gi|240168158|ref|ZP_04746817.1| PE family protein [Mycobacterium kansasii ATCC 12478]
Length=546
Score = 342 bits (878), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 195/405 (49%), Positives = 261/405 (65%), Gaps = 24/405 (5%)
Query 210 AAAQTVGLVMGGSGTPIPSARYVELANALYMSGSVPGVIAQALFTPQGLYPVVVIKNLTF 269
A Q +VM G+G+PIPS +YV L++ PG++ L T + LYP+ +K+L F
Sbjct 118 AFGQNTAIVMSGTGSPIPSIQYVAAITNLFLP---PGMVVNPLNTIEELYPITGVKSLPF 174
Query 270 DSSVAQGAVILESAIRQQIAAGNNVTVFGYSQSATISSLVMANLAA-SADPPSPDELSFT 328
+SV G IL++AI +QI AGN+VTVFGYSQSA ISSL + L + + P P +LSF
Sbjct 175 QNSVQTGLQILDAAIWEQIHAGNHVTVFGYSQSAVISSLEIQQLLSLGPNKPDPSQLSFI 234
Query 329 LIGNPNNPNGGVATRFPGISFPSLGVTATGATPHNLYPTKIYTIEYDGVADFPRYPLNFV 388
IGN NPNGG+ +R PG++ +LG+ GAT N YPT YT+EYDG ADFPRYPLN +
Sbjct 235 FIGNEMNPNGGILSRIPGLNISTLGLPFYGATADNPYPTTTYTLEYDGFADFPRYPLNVL 294
Query 389 STLNAIAGTYYVHSNYFILTPEQIDAAVPLTNTVGPTMTQYYIIRTENLPLLEPLRSVPI 448
S +NA+ G VH+ Y LTP+Q+ A+ L T G T QY+II T +LPLL+P+R++P+
Sbjct 295 SDINAVFGIITVHTQYQYLTPQQVANAI-LLPTEGVTSNQYFIIPTAHLPLLDPVRAIPV 353
Query 449 VGNPLANLVQPNLKVIVNLGYGDPAYGYSTSPPNVATPFGLFPEVSPVVIADALVAGTQQ 508
+G PLA L++P+L+V+VNLGYGDP +GYSTSP NV TPFGLFP+V P VI DALVAGT Q
Sbjct 354 IGPPLAALIEPDLRVLVNLGYGDPRFGYSTSPANVPTPFGLFPDVPPGVIVDALVAGTHQ 413
Query 509 GIGDF----AYDVSHLELPLPADGSTMPSTAPGSGTPVPPLSIDSLIDDLQVANRNLANT 564
GI DF ++ ELP+ + P S PVP N+A+T
Sbjct 414 GINDFAAALPAALNPPELPVIGFPPYIQQILPPSPGPVP------------ATPANIAST 461
Query 565 ISKVAATSYATVLPTADIANAALTIVPSYNIHLFLEGIQQALKGD 609
+ V + SY+ +LPTAD+ A TI+P+Y++ LFL Q L G+
Sbjct 462 FAAVVSDSYSLLLPTADLGLAFATILPAYDLSLFLN---QLLHGN 503
>gi|31793793|ref|NP_856286.1| PPE family protein [Mycobacterium bovis AF2122/97]
gi|121638495|ref|YP_978719.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224990989|ref|YP_002645676.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172]
8 more sequence titles
Length=580
Score = 338 bits (866), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 243/583 (42%), Positives = 323/583 (56%), Gaps = 74/583 (12%)
Query 4 NFAVLPPEVNSARVFAGAGSAPMLAAAAAWDDLASELHCAAMSFGSVTSGLVVGWWQGSA 63
NFAVLPPEVNSAR+FAGAG PMLAAA+AWD LA ELH AA SF SVT+GL W G A
Sbjct 2 NFAVLPPEVNSARIFAGAGLGPMLAAASAWDGLAEELHAAAGSFASVTTGLAGDAWHGPA 61
Query 64 SAAMVDAAASYIGWLSTSAAHAEGAAGLARAAVSVFEEALAATVHPAMVAANRAQV---- 119
S AM AA+ Y+GWL+T+A A AAG AR A S FE LAATV PAMVAANR ++
Sbjct 62 SLAMTRAASPYVGWLNTAAGQAAQAAGQARLAASAFEATLAATVSPAMVAANRTRLASLV 121
Query 120 -ASLVASN---------------------LFG----------QNAPAIAALESLYECMWA 147
A+L+ N +FG Q AP L+ + + A
Sbjct 122 AANLLGQNAPAIAAAEAEYEQIWAQDVAAMFGYHSAASAVATQLAPIQEGLQQQLQNVLA 181
Query 148 QDAAAMAGY------YVGASAVATQLASWLQRLQSIPGAASLDAR---LPSSAEAPMGVV 198
Q A+ G +G + + R + G ++ R + ++ +G+
Sbjct 182 QLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIG 241
Query 199 RAVNSAIAANAAAAQTV-----------GLVMGGSGT--PIPSARYVELANALYMSGSVP 245
N I A V LVMGG+ + +P+ +E A A +++ P
Sbjct 242 ITGNGQIGFGKPANPDVLVVGNGGPGVTALVMGGTDSLLSLPNIPLLEYA-ARFITPVHP 300
Query 246 GVIAQALFTPQGLYPVVVIKNLTFDSSVAQGAVILESAIRQQIAAGNNVTVFGYSQSATI 305
G A L TP +P + +LT+D SVAQG L +AI Q+AAGN V VFG SQSATI
Sbjct 301 GYTATFLETPSQFFPFTGLNSLTYDVSVAQGVTNLHTAIMAQLAAGNEVVVFGTSQSATI 360
Query 306 SSLVMANLAA--SADPPSPDELSFTLIGNPNNPNGGVATRFPGISFPSLGVTATGATPHN 363
++ M L + + P DELSFTL GNPN P+GG+ TRF G S P LG T +GATP +
Sbjct 361 ATFEMRYLQSLPAHLRPGLDELSFTLTGNPNRPDGGILTRF-GFSIPQLGFTLSGATPAD 419
Query 364 LYPTKIYTIEYDGVADFPRYPLNFVSTLNAIAGTYYVHSNYFILTPEQIDAAV-PLTNTV 422
YPT Y +YDGV DFP+YPLN +T NAIAG ++HS L P+ V P+++
Sbjct 420 AYPTVDYAFQYDGVNDFPKYPLNVFATANAIAGILFLHSGLIALPPDLASGVVQPVSSP- 478
Query 423 GPTMTQYYIIRTENLPLLEPLRSVPIVGNPLANLVQPNLKVIVNLGYGDPAYGYSTSPPN 482
+T Y ++ +++LPLL PLR++P++GNPLA+L+QP+L+V+V LGY A+ +
Sbjct 479 -DVLTTYILLPSQDLPLLVPLRAIPLLGNPLADLIQPDLRVLVELGYDRTAH------QD 531
Query 483 VATPFGLFPEVSPVVIADALVAGTQQGIGDFAYDVSHLELPLP 525
V +PFGLFP+V +A L G QG+ D +S L LP P
Sbjct 532 VPSPFGLFPDVDWAEVAADLQQGAVQGVND---ALSGLGLPPP 571
>gi|15842148|ref|NP_337185.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
gi|13882433|gb|AAK46999.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
gi|323718805|gb|EGB27962.1| PPE family protein [Mycobacterium tuberculosis CDC1551A]
Length=580
Score = 333 bits (853), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 245/583 (43%), Positives = 323/583 (56%), Gaps = 74/583 (12%)
Query 4 NFAVLPPEVNSARVFAGAGSAPMLAAAAAWDDLASELHCAAMSFGSVTSGLVVGWWQGSA 63
NFAVLPPEVNSAR+FAGAG PMLAAA+AWD LA ELH AA SF SVT+GL W G A
Sbjct 2 NFAVLPPEVNSARIFAGAGLGPMLAAASAWDGLAEELHAAAGSFASVTTGLTGDAWHGPA 61
Query 64 SAAMVDAAASYIGWLSTSAAHAEGAAGLARAAVSVFEEALAATVHPAMVAANRAQV---- 119
S AM AA+ Y+GWL+T+A A AAG AR A S FE LAATV PAMVAANR ++
Sbjct 62 SLAMTRAASPYVGWLNTAAGQAAQAAGQARLAASAFEATLAATVSPAMVAANRTRLASLV 121
Query 120 -ASLVASN---------------------LFG----------QNAPAIAALESLYECMWA 147
A+L+ N +FG Q AP L+ + + A
Sbjct 122 AANLLGQNAPAIAAAEAEYEQIWAQDVAAMFGYHSAASAVATQLAPIQEGLQQQLQNVLA 181
Query 148 QDAAAMAGY------YVGASAVATQLASWLQRLQSIPGAASLDAR---LPSSAEAPMGVV 198
Q A+ G +G + + R + G ++ R + ++ +G+
Sbjct 182 QLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIG 241
Query 199 RAVNSAIAANAAAAQTV-----------GLVMGG--SGTPIPSARYVELANALYMSGSVP 245
N I A V LVMGG S P+P+ +E A A +++ P
Sbjct 242 ITGNGQIGFGKPANPDVLVVGNGGPGVTALVMGGTDSLLPLPNIPLLEYA-ARFITPVHP 300
Query 246 GVIAQALFTPQGLYPVVVIKNLTFDSSVAQGAVILESAIRQQIAAGNNVTVFGYSQSATI 305
G A L TP +P + +LT+D SVAQG L +AI Q+AAGN V VFG SQSATI
Sbjct 301 GYTATFLETPSQFFPFTGLNSLTYDVSVAQGVTNLHTAIMAQLAAGNEVVVFGTSQSATI 360
Query 306 SSLVMANLAA--SADPPSPDELSFTLIGNPNNPNGGVATRFPGISFPSLGVTATGATPHN 363
++ M L + + P DELSFTL GNPN P+GG+ TRF G S P LG T +GATP +
Sbjct 361 ATFEMRYLQSLPAHLRPGLDELSFTLTGNPNRPDGGILTRF-GFSIPQLGFTLSGATPAD 419
Query 364 LYPTKIYTIEYDGVADFPRYPLNFVSTLNAIAGTYYVHSNYFILTPEQIDAAV-PLTNTV 422
YPT Y +YDGV DFP+YPLN +T NAIAG ++HS L P+ V P+++
Sbjct 420 AYPTVDYAFQYDGVNDFPKYPLNVFATANAIAGILFLHSGLIALPPDLASGVVQPVSSP- 478
Query 423 GPTMTQYYIIRTENLPLLEPLRSVPIVGNPLANLVQPNLKVIVNLGYGDPAYGYSTSPPN 482
+T Y ++ +++LPLL PLR++P++GNPLA+L+QP+L+V+V LGY A+ +
Sbjct 479 -DVLTTYILLPSQDLPLLVPLRAIPLLGNPLADLIQPDLRVLVELGYDRTAH------QD 531
Query 483 VATPFGLFPEVSPVVIADALVAGTQQGIGDFAYDVSHLELPLP 525
V +PFGLFP+V +A L G QG+ D +S L LP P
Sbjct 532 VPSPFGLFPDVDWAEVAADLQQGAVQGVND---ALSGLGLPPP 571
>gi|57117005|ref|YP_177893.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
gi|148662448|ref|YP_001283971.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
gi|148823802|ref|YP_001288556.1| PPE family protein [Mycobacterium tuberculosis F11]
39 more sequence titles
Length=580
Score = 333 bits (853), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 245/583 (43%), Positives = 323/583 (56%), Gaps = 74/583 (12%)
Query 4 NFAVLPPEVNSARVFAGAGSAPMLAAAAAWDDLASELHCAAMSFGSVTSGLVVGWWQGSA 63
NFAVLPPEVNSAR+FAGAG PMLAAA+AWD LA ELH AA SF SVT+GL W G A
Sbjct 2 NFAVLPPEVNSARIFAGAGLGPMLAAASAWDGLAEELHAAAGSFASVTTGLAGDAWHGPA 61
Query 64 SAAMVDAAASYIGWLSTSAAHAEGAAGLARAAVSVFEEALAATVHPAMVAANRAQV---- 119
S AM AA+ Y+GWL+T+A A AAG AR A S FE LAATV PAMVAANR ++
Sbjct 62 SLAMTRAASPYVGWLNTAAGQAAQAAGQARLAASAFEATLAATVSPAMVAANRTRLASLV 121
Query 120 -ASLVASN---------------------LFG----------QNAPAIAALESLYECMWA 147
A+L+ N +FG Q AP L+ + + A
Sbjct 122 AANLLGQNAPAIAAAEAEYEQIWAQDVAAMFGYHSAASAVATQLAPIQEGLQQQLQNVLA 181
Query 148 QDAAAMAGY------YVGASAVATQLASWLQRLQSIPGAASLDAR---LPSSAEAPMGVV 198
Q A+ G +G + + R + G ++ R + ++ +G+
Sbjct 182 QLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIG 241
Query 199 RAVNSAIAANAAAAQTV-----------GLVMGG--SGTPIPSARYVELANALYMSGSVP 245
N I A V LVMGG S P+P+ +E A A +++ P
Sbjct 242 ITGNGQIGFGKPANPDVLVVGNGGPGVTALVMGGTDSLLPLPNIPLLEYA-ARFITPVHP 300
Query 246 GVIAQALFTPQGLYPVVVIKNLTFDSSVAQGAVILESAIRQQIAAGNNVTVFGYSQSATI 305
G A L TP +P + +LT+D SVAQG L +AI Q+AAGN V VFG SQSATI
Sbjct 301 GYTATFLETPSQFFPFTGLNSLTYDVSVAQGVTNLHTAIMAQLAAGNEVVVFGTSQSATI 360
Query 306 SSLVMANLAA--SADPPSPDELSFTLIGNPNNPNGGVATRFPGISFPSLGVTATGATPHN 363
++ M L + + P DELSFTL GNPN P+GG+ TRF G S P LG T +GATP +
Sbjct 361 ATFEMRYLQSLPAHLRPGLDELSFTLTGNPNRPDGGILTRF-GFSIPQLGFTLSGATPAD 419
Query 364 LYPTKIYTIEYDGVADFPRYPLNFVSTLNAIAGTYYVHSNYFILTPEQIDAAV-PLTNTV 422
YPT Y +YDGV DFP+YPLN +T NAIAG ++HS L P+ V P+++
Sbjct 420 AYPTVDYAFQYDGVNDFPKYPLNVFATANAIAGILFLHSGLIALPPDLASGVVQPVSSP- 478
Query 423 GPTMTQYYIIRTENLPLLEPLRSVPIVGNPLANLVQPNLKVIVNLGYGDPAYGYSTSPPN 482
+T Y ++ +++LPLL PLR++P++GNPLA+L+QP+L+V+V LGY A+ +
Sbjct 479 -DVLTTYILLPSQDLPLLVPLRAIPLLGNPLADLIQPDLRVLVELGYDRTAH------QD 531
Query 483 VATPFGLFPEVSPVVIADALVAGTQQGIGDFAYDVSHLELPLP 525
V +PFGLFP+V +A L G QG+ D +S L LP P
Sbjct 532 VPSPFGLFPDVDWAEVAADLQQGAVQGVND---ALSGLGLPPP 571
Lambda K H
0.316 0.131 0.377
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1525141620640
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40