BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1801
Length=423
Score E
Sequences producing significant alignments: (Bits) Value
gi|15841271|ref|NP_336308.1| PPE family protein [Mycobacterium t... 809 0.0
gi|339631855|ref|YP_004723497.1| PPE family protein [Mycobacteri... 808 0.0
gi|339294738|gb|AEJ46849.1| PPE family protein [Mycobacterium tu... 807 0.0
gi|289574478|ref|ZP_06454705.1| PPE family protein [Mycobacteriu... 806 0.0
gi|289447416|ref|ZP_06437160.1| PPE family protein [Mycobacteriu... 803 0.0
gi|340626811|ref|YP_004745263.1| PPE family protein [Mycobacteri... 802 0.0
gi|313658681|ref|ZP_07815561.1| PPE family protein [Mycobacteriu... 778 0.0
gi|167967221|ref|ZP_02549498.1| PPE family protein [Mycobacteriu... 758 0.0
gi|289745767|ref|ZP_06505145.1| PPE family protein [Mycobacteriu... 655 0.0
gi|289750372|ref|ZP_06509750.1| PPE family protein [Mycobacteriu... 646 0.0
gi|289761951|ref|ZP_06521329.1| PPE family protein [Mycobacteriu... 626 2e-177
gi|289757904|ref|ZP_06517282.1| PPE family protein [Mycobacteriu... 594 7e-168
gi|254550809|ref|ZP_05141256.1| PPE family protein [Mycobacteriu... 553 1e-155
gi|183981478|ref|YP_001849769.1| PPE family protein [Mycobacteri... 317 2e-84
gi|240171262|ref|ZP_04749921.1| PPE family protein [Mycobacteriu... 297 2e-78
gi|57116921|ref|YP_177844.1| PPE family protein [Mycobacterium t... 289 5e-76
gi|31792997|ref|NP_855490.1| PPE family protein [Mycobacterium b... 289 7e-76
gi|167967397|ref|ZP_02549674.1| PPE family protein [Mycobacteriu... 288 1e-75
gi|294996719|ref|ZP_06802410.1| PPE family protein [Mycobacteriu... 287 2e-75
gi|240172862|ref|ZP_04751521.1| PPE family protein [Mycobacteriu... 286 5e-75
gi|308372058|ref|ZP_07427232.2| putative PPE family protein [Myc... 279 7e-73
gi|183982691|ref|YP_001850982.1| PPE family protein, PPE32 [Myco... 272 6e-71
gi|296170356|ref|ZP_06851947.1| PPE family protein [Mycobacteriu... 271 2e-70
gi|118618457|ref|YP_906789.1| PPE family protein [Mycobacterium ... 269 8e-70
gi|307084423|ref|ZP_07493536.1| putative PPE family protein [Myc... 268 2e-69
gi|212596761|gb|ACJ35604.1| PPE43 [Mycobacterium intracellulare ... 263 3e-68
gi|254550816|ref|ZP_05141263.1| PPE family protein [Mycobacteriu... 260 3e-67
gi|15841278|ref|NP_336315.1| PPE family protein [Mycobacterium t... 252 8e-65
gi|296164791|ref|ZP_06847351.1| PPE family protein [Mycobacteriu... 251 1e-64
gi|183982688|ref|YP_001850979.1| PPE family protein, PPE31_1 [My... 246 7e-63
gi|118618459|ref|YP_906791.1| PPE family protein [Mycobacterium ... 243 3e-62
gi|342859619|ref|ZP_08716272.1| PPE family protein [Mycobacteriu... 242 1e-61
gi|289574372|ref|ZP_06454599.1| PPE family protein [Mycobacteriu... 240 3e-61
gi|118466613|ref|YP_881225.1| PPE family protein [Mycobacterium ... 236 5e-60
gi|240169037|ref|ZP_04747696.1| PPE family protein [Mycobacteriu... 236 6e-60
gi|333991947|ref|YP_004524561.1| PPE family protein [Mycobacteri... 232 9e-59
gi|118466467|ref|YP_882538.1| PPE family protein [Mycobacterium ... 232 1e-58
gi|333990650|ref|YP_004523264.1| PPE family protein [Mycobacteri... 231 2e-58
gi|296170357|ref|ZP_06851948.1| PPE family protein [Mycobacteriu... 230 3e-58
gi|307079711|ref|ZP_07488881.1| PPE family protein [Mycobacteriu... 229 6e-58
gi|336458159|gb|EGO37142.1| PPE-repeat containing protein [Mycob... 229 7e-58
gi|340626711|ref|YP_004745163.1| PPE family protein [Mycobacteri... 228 1e-57
gi|31792891|ref|NP_855384.1| PPE family protein [Mycobacterium b... 228 1e-57
gi|15841163|ref|NP_336200.1| PPE family protein [Mycobacterium t... 227 3e-57
gi|57116898|ref|YP_177827.1| PPE family protein [Mycobacterium t... 227 3e-57
gi|167969175|ref|ZP_02551452.1| PPE family protein [Mycobacteriu... 227 4e-57
gi|57116922|ref|YP_177845.1| PPE family protein [Mycobacterium t... 227 4e-57
gi|289745858|ref|ZP_06505236.1| PPE family protein [Mycobacteriu... 226 5e-57
gi|296167733|ref|ZP_06849950.1| PPE family protein [Mycobacteriu... 226 7e-57
gi|336457980|gb|EGO36967.1| PPE-repeat containing protein [Mycob... 226 8e-57
>gi|15841271|ref|NP_336308.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
gi|31792989|ref|NP_855482.1| PPE family protein [Mycobacterium bovis AF2122/97]
gi|57116916|ref|YP_177840.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
57 more sequence titles
Length=423
Score = 809 bits (2089), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/423 (100%), Positives = 423/423 (100%), Gaps = 0/423 (0%)
Query 1 MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGAWSGPS 60
MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGAWSGPS
Sbjct 1 MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGAWSGPS 60
Query 61 STSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVLI 120
STSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVLI
Sbjct 61 STSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVLI 120
Query 121 ATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTAFTEPPQTTNHGQLGA 180
ATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTAFTEPPQTTNHGQLGA
Sbjct 121 ATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTAFTEPPQTTNHGQLGA 180
Query 181 QSSAVAQTAATAAGGNLQSAFPQLLSAVPRALQGLALPTASQSASATPQWVTDLGNLSTF 240
QSSAVAQTAATAAGGNLQSAFPQLLSAVPRALQGLALPTASQSASATPQWVTDLGNLSTF
Sbjct 181 QSSAVAQTAATAAGGNLQSAFPQLLSAVPRALQGLALPTASQSASATPQWVTDLGNLSTF 240
Query 241 LGGAVTGPYTFPGVLPPSGVPYLLGIQSVLVTQNGQGVSALLGKIGGKPITGALAPLAEF 300
LGGAVTGPYTFPGVLPPSGVPYLLGIQSVLVTQNGQGVSALLGKIGGKPITGALAPLAEF
Sbjct 241 LGGAVTGPYTFPGVLPPSGVPYLLGIQSVLVTQNGQGVSALLGKIGGKPITGALAPLAEF 300
Query 301 ALHTPILGSEGLGGGSVSAGIGRAGLVGKLSVPQGWTVAAPEIPSPAAALQATRLAAAPI 360
ALHTPILGSEGLGGGSVSAGIGRAGLVGKLSVPQGWTVAAPEIPSPAAALQATRLAAAPI
Sbjct 301 ALHTPILGSEGLGGGSVSAGIGRAGLVGKLSVPQGWTVAAPEIPSPAAALQATRLAAAPI 360
Query 361 AATDGAGALLGGMALSGLAGRAAAGSTGHPIGSAAAPAVGAAAAAVEDLATEANIFVIPA 420
AATDGAGALLGGMALSGLAGRAAAGSTGHPIGSAAAPAVGAAAAAVEDLATEANIFVIPA
Sbjct 361 AATDGAGALLGGMALSGLAGRAAAGSTGHPIGSAAAPAVGAAAAAVEDLATEANIFVIPA 420
Query 421 MDD 423
MDD
Sbjct 421 MDD 423
>gi|339631855|ref|YP_004723497.1| PPE family protein [Mycobacterium africanum GM041182]
gi|339331211|emb|CCC26893.1| PPE family protein [Mycobacterium africanum GM041182]
Length=423
Score = 808 bits (2087), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/423 (99%), Positives = 423/423 (100%), Gaps = 0/423 (0%)
Query 1 MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGAWSGPS 60
MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGAWSGPS
Sbjct 1 MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGAWSGPS 60
Query 61 STSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVLI 120
STSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVLI
Sbjct 61 STSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVLI 120
Query 121 ATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTAFTEPPQTTNHGQLGA 180
ATNIFGQNTPAIMMTEAQYMEMWAQD+AAMYGYAGSSATASRMTAFTEPPQTTNHGQLGA
Sbjct 121 ATNIFGQNTPAIMMTEAQYMEMWAQDSAAMYGYAGSSATASRMTAFTEPPQTTNHGQLGA 180
Query 181 QSSAVAQTAATAAGGNLQSAFPQLLSAVPRALQGLALPTASQSASATPQWVTDLGNLSTF 240
QSSAVAQTAATAAGGNLQSAFPQLLSAVPRALQGLALPTASQSASATPQWVTDLGNLSTF
Sbjct 181 QSSAVAQTAATAAGGNLQSAFPQLLSAVPRALQGLALPTASQSASATPQWVTDLGNLSTF 240
Query 241 LGGAVTGPYTFPGVLPPSGVPYLLGIQSVLVTQNGQGVSALLGKIGGKPITGALAPLAEF 300
LGGAVTGPYTFPGVLPPSGVPYLLGIQSVLVTQNGQGVSALLGKIGGKPITGALAPLAEF
Sbjct 241 LGGAVTGPYTFPGVLPPSGVPYLLGIQSVLVTQNGQGVSALLGKIGGKPITGALAPLAEF 300
Query 301 ALHTPILGSEGLGGGSVSAGIGRAGLVGKLSVPQGWTVAAPEIPSPAAALQATRLAAAPI 360
ALHTPILGSEGLGGGSVSAGIGRAGLVGKLSVPQGWTVAAPEIPSPAAALQATRLAAAPI
Sbjct 301 ALHTPILGSEGLGGGSVSAGIGRAGLVGKLSVPQGWTVAAPEIPSPAAALQATRLAAAPI 360
Query 361 AATDGAGALLGGMALSGLAGRAAAGSTGHPIGSAAAPAVGAAAAAVEDLATEANIFVIPA 420
AATDGAGALLGGMALSGLAGRAAAGSTGHPIGSAAAPAVGAAAAAVEDLATEANIFVIPA
Sbjct 361 AATDGAGALLGGMALSGLAGRAAAGSTGHPIGSAAAPAVGAAAAAVEDLATEANIFVIPA 420
Query 421 MDD 423
MDD
Sbjct 421 MDD 423
>gi|339294738|gb|AEJ46849.1| PPE family protein [Mycobacterium tuberculosis CCDC5079]
Length=423
Score = 807 bits (2085), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/423 (99%), Positives = 422/423 (99%), Gaps = 0/423 (0%)
Query 1 MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGAWSGPS 60
MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGAWSGPS
Sbjct 1 MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGAWSGPS 60
Query 61 STSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVLI 120
STSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVLI
Sbjct 61 STSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVLI 120
Query 121 ATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTAFTEPPQTTNHGQLGA 180
ATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTAFTEPPQTTNHGQLGA
Sbjct 121 ATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTAFTEPPQTTNHGQLGA 180
Query 181 QSSAVAQTAATAAGGNLQSAFPQLLSAVPRALQGLALPTASQSASATPQWVTDLGNLSTF 240
QSSAVAQTAATAAGGNLQSAFPQLLSAVPRALQGLALPTASQSASATPQWVTDLGNLSTF
Sbjct 181 QSSAVAQTAATAAGGNLQSAFPQLLSAVPRALQGLALPTASQSASATPQWVTDLGNLSTF 240
Query 241 LGGAVTGPYTFPGVLPPSGVPYLLGIQSVLVTQNGQGVSALLGKIGGKPITGALAPLAEF 300
LGGAVTGPYTFPGVLPPSGVPYLL IQSVLVTQNGQGVSALLGKIGGKPITGALAPLAEF
Sbjct 241 LGGAVTGPYTFPGVLPPSGVPYLLSIQSVLVTQNGQGVSALLGKIGGKPITGALAPLAEF 300
Query 301 ALHTPILGSEGLGGGSVSAGIGRAGLVGKLSVPQGWTVAAPEIPSPAAALQATRLAAAPI 360
ALHTPILGSEGLGGGSVSAGIGRAGLVGKLSVPQGWTVAAPEIPSPAAALQATRLAAAPI
Sbjct 301 ALHTPILGSEGLGGGSVSAGIGRAGLVGKLSVPQGWTVAAPEIPSPAAALQATRLAAAPI 360
Query 361 AATDGAGALLGGMALSGLAGRAAAGSTGHPIGSAAAPAVGAAAAAVEDLATEANIFVIPA 420
AATDGAGALLGGMALSGLAGRAAAGSTGHPIGSAAAPAVGAAAAAVEDLATEANIFVIPA
Sbjct 361 AATDGAGALLGGMALSGLAGRAAAGSTGHPIGSAAAPAVGAAAAAVEDLATEANIFVIPA 420
Query 421 MDD 423
MDD
Sbjct 421 MDD 423
>gi|289574478|ref|ZP_06454705.1| PPE family protein [Mycobacterium tuberculosis K85]
gi|289538909|gb|EFD43487.1| PPE family protein [Mycobacterium tuberculosis K85]
Length=423
Score = 806 bits (2082), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/423 (99%), Positives = 422/423 (99%), Gaps = 0/423 (0%)
Query 1 MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGAWSGPS 60
MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGAWSGPS
Sbjct 1 MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGAWSGPS 60
Query 61 STSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVLI 120
STSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVLI
Sbjct 61 STSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVLI 120
Query 121 ATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTAFTEPPQTTNHGQLGA 180
ATNIFGQNTPAIMMTEAQYMEMWAQD+AAMYGYAGSSATASRMTAFTEPPQTTNHGQLGA
Sbjct 121 ATNIFGQNTPAIMMTEAQYMEMWAQDSAAMYGYAGSSATASRMTAFTEPPQTTNHGQLGA 180
Query 181 QSSAVAQTAATAAGGNLQSAFPQLLSAVPRALQGLALPTASQSASATPQWVTDLGNLSTF 240
QSSAVAQTAATAAGGNLQSAFPQLLSAVPRALQGLALPTASQSASATPQWVTDLGNLSTF
Sbjct 181 QSSAVAQTAATAAGGNLQSAFPQLLSAVPRALQGLALPTASQSASATPQWVTDLGNLSTF 240
Query 241 LGGAVTGPYTFPGVLPPSGVPYLLGIQSVLVTQNGQGVSALLGKIGGKPITGALAPLAEF 300
LGG VTGPYTFPGVLPPSGVPYLLGIQSVLVTQNGQGVSALLGKIGGKPITGALAPLAEF
Sbjct 241 LGGEVTGPYTFPGVLPPSGVPYLLGIQSVLVTQNGQGVSALLGKIGGKPITGALAPLAEF 300
Query 301 ALHTPILGSEGLGGGSVSAGIGRAGLVGKLSVPQGWTVAAPEIPSPAAALQATRLAAAPI 360
ALHTPILGSEGLGGGSVSAGIGRAGLVGKLSVPQGWTVAAPEIPSPAAALQATRLAAAPI
Sbjct 301 ALHTPILGSEGLGGGSVSAGIGRAGLVGKLSVPQGWTVAAPEIPSPAAALQATRLAAAPI 360
Query 361 AATDGAGALLGGMALSGLAGRAAAGSTGHPIGSAAAPAVGAAAAAVEDLATEANIFVIPA 420
AATDGAGALLGGMALSGLAGRAAAGSTGHPIGSAAAPAVGAAAAAVEDLATEANIFVIPA
Sbjct 361 AATDGAGALLGGMALSGLAGRAAAGSTGHPIGSAAAPAVGAAAAAVEDLATEANIFVIPA 420
Query 421 MDD 423
MDD
Sbjct 421 MDD 423
>gi|289447416|ref|ZP_06437160.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
gi|289420374|gb|EFD17575.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
Length=423
Score = 803 bits (2073), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/423 (99%), Positives = 421/423 (99%), Gaps = 0/423 (0%)
Query 1 MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGAWSGPS 60
MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGAWSGPS
Sbjct 1 MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGAWSGPS 60
Query 61 STSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVLI 120
STSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLM LI
Sbjct 61 STSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMGLI 120
Query 121 ATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTAFTEPPQTTNHGQLGA 180
ATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTAFTEPPQTTNHGQLGA
Sbjct 121 ATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTAFTEPPQTTNHGQLGA 180
Query 181 QSSAVAQTAATAAGGNLQSAFPQLLSAVPRALQGLALPTASQSASATPQWVTDLGNLSTF 240
QSSAVAQTAATAAGGNLQSAFPQLLSAVPRALQGLALPTASQSASATPQWVTDLGNLSTF
Sbjct 181 QSSAVAQTAATAAGGNLQSAFPQLLSAVPRALQGLALPTASQSASATPQWVTDLGNLSTF 240
Query 241 LGGAVTGPYTFPGVLPPSGVPYLLGIQSVLVTQNGQGVSALLGKIGGKPITGALAPLAEF 300
LGGAVTGPYTFPGVLPPSGVPYLLGIQSVLVTQNGQGVSALLGKIGGKPITGALAPLAEF
Sbjct 241 LGGAVTGPYTFPGVLPPSGVPYLLGIQSVLVTQNGQGVSALLGKIGGKPITGALAPLAEF 300
Query 301 ALHTPILGSEGLGGGSVSAGIGRAGLVGKLSVPQGWTVAAPEIPSPAAALQATRLAAAPI 360
ALHTPILGSEGLGGGSVSAGIGRAGLVGKLSVPQGWTVAAPEIPSPAAALQATRLAAAPI
Sbjct 301 ALHTPILGSEGLGGGSVSAGIGRAGLVGKLSVPQGWTVAAPEIPSPAAALQATRLAAAPI 360
Query 361 AATDGAGALLGGMALSGLAGRAAAGSTGHPIGSAAAPAVGAAAAAVEDLATEANIFVIPA 420
AATDG GALLGGMALSGLAGRAAAGSTGHPIGSAAAPAVGAAAAAVEDLATEANIFVIPA
Sbjct 361 AATDGPGALLGGMALSGLAGRAAAGSTGHPIGSAAAPAVGAAAAAVEDLATEANIFVIPA 420
Query 421 MDD 423
MDD
Sbjct 421 MDD 423
>gi|340626811|ref|YP_004745263.1| PPE family protein [Mycobacterium canettii CIPT 140010059]
gi|340005001|emb|CCC44149.1| PPE family protein [Mycobacterium canettii CIPT 140010059]
Length=423
Score = 802 bits (2072), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/423 (99%), Positives = 420/423 (99%), Gaps = 0/423 (0%)
Query 1 MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGAWSGPS 60
MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGAWSGPS
Sbjct 1 MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGAWSGPS 60
Query 61 STSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVLI 120
STSMASAAAPYVAWMSATAVHAELA AQARLA+AAYEAAFAATVPPPVIAANRAQLMVLI
Sbjct 61 STSMASAAAPYVAWMSATAVHAELAAAQARLAVAAYEAAFAATVPPPVIAANRAQLMVLI 120
Query 121 ATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTAFTEPPQTTNHGQLGA 180
ATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTAFTEPPQTTNH QLGA
Sbjct 121 ATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTAFTEPPQTTNHSQLGA 180
Query 181 QSSAVAQTAATAAGGNLQSAFPQLLSAVPRALQGLALPTASQSASATPQWVTDLGNLSTF 240
QSSAVAQT ATAAGGNLQSAFPQLLSAVPRALQGLALPTASQSASATPQWVTDLGNLSTF
Sbjct 181 QSSAVAQTVATAAGGNLQSAFPQLLSAVPRALQGLALPTASQSASATPQWVTDLGNLSTF 240
Query 241 LGGAVTGPYTFPGVLPPSGVPYLLGIQSVLVTQNGQGVSALLGKIGGKPITGALAPLAEF 300
LGGAVTGPYTFPGVLPPSGVPYLLGIQSVLVTQNGQGVSALLGKIGGKPITGALAPLAEF
Sbjct 241 LGGAVTGPYTFPGVLPPSGVPYLLGIQSVLVTQNGQGVSALLGKIGGKPITGALAPLAEF 300
Query 301 ALHTPILGSEGLGGGSVSAGIGRAGLVGKLSVPQGWTVAAPEIPSPAAALQATRLAAAPI 360
ALHTPILGSEGLGGGSVSAGIGRAGLVGKLSVPQGWTVAAPEIPSPAAALQATRLAAAP+
Sbjct 301 ALHTPILGSEGLGGGSVSAGIGRAGLVGKLSVPQGWTVAAPEIPSPAAALQATRLAAAPM 360
Query 361 AATDGAGALLGGMALSGLAGRAAAGSTGHPIGSAAAPAVGAAAAAVEDLATEANIFVIPA 420
AATDGAGALLGGMALSGLAGRAAAGSTGHPIGSAAAPAVGAAAAAVEDLATEANIFVIPA
Sbjct 361 AATDGAGALLGGMALSGLAGRAAAGSTGHPIGSAAAPAVGAAAAAVEDLATEANIFVIPA 420
Query 421 MDD 423
MDD
Sbjct 421 MDD 423
>gi|313658681|ref|ZP_07815561.1| PPE family protein [Mycobacterium tuberculosis KZN V2475]
Length=409
Score = 778 bits (2009), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/409 (100%), Positives = 409/409 (100%), Gaps = 0/409 (0%)
Query 15 MYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGAWSGPSSTSMASAAAPYVAW 74
MYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGAWSGPSSTSMASAAAPYVAW
Sbjct 1 MYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGAWSGPSSTSMASAAAPYVAW 60
Query 75 MSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVLIATNIFGQNTPAIMM 134
MSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVLIATNIFGQNTPAIMM
Sbjct 61 MSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVLIATNIFGQNTPAIMM 120
Query 135 TEAQYMEMWAQDAAAMYGYAGSSATASRMTAFTEPPQTTNHGQLGAQSSAVAQTAATAAG 194
TEAQYMEMWAQDAAAMYGYAGSSATASRMTAFTEPPQTTNHGQLGAQSSAVAQTAATAAG
Sbjct 121 TEAQYMEMWAQDAAAMYGYAGSSATASRMTAFTEPPQTTNHGQLGAQSSAVAQTAATAAG 180
Query 195 GNLQSAFPQLLSAVPRALQGLALPTASQSASATPQWVTDLGNLSTFLGGAVTGPYTFPGV 254
GNLQSAFPQLLSAVPRALQGLALPTASQSASATPQWVTDLGNLSTFLGGAVTGPYTFPGV
Sbjct 181 GNLQSAFPQLLSAVPRALQGLALPTASQSASATPQWVTDLGNLSTFLGGAVTGPYTFPGV 240
Query 255 LPPSGVPYLLGIQSVLVTQNGQGVSALLGKIGGKPITGALAPLAEFALHTPILGSEGLGG 314
LPPSGVPYLLGIQSVLVTQNGQGVSALLGKIGGKPITGALAPLAEFALHTPILGSEGLGG
Sbjct 241 LPPSGVPYLLGIQSVLVTQNGQGVSALLGKIGGKPITGALAPLAEFALHTPILGSEGLGG 300
Query 315 GSVSAGIGRAGLVGKLSVPQGWTVAAPEIPSPAAALQATRLAAAPIAATDGAGALLGGMA 374
GSVSAGIGRAGLVGKLSVPQGWTVAAPEIPSPAAALQATRLAAAPIAATDGAGALLGGMA
Sbjct 301 GSVSAGIGRAGLVGKLSVPQGWTVAAPEIPSPAAALQATRLAAAPIAATDGAGALLGGMA 360
Query 375 LSGLAGRAAAGSTGHPIGSAAAPAVGAAAAAVEDLATEANIFVIPAMDD 423
LSGLAGRAAAGSTGHPIGSAAAPAVGAAAAAVEDLATEANIFVIPAMDD
Sbjct 361 LSGLAGRAAAGSTGHPIGSAAAPAVGAAAAAVEDLATEANIFVIPAMDD 409
>gi|167967221|ref|ZP_02549498.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
Length=400
Score = 758 bits (1957), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/400 (100%), Positives = 400/400 (100%), Gaps = 0/400 (0%)
Query 24 MLAAATAWDGLAVELHATAAGYASELSALTGAWSGPSSTSMASAAAPYVAWMSATAVHAE 83
MLAAATAWDGLAVELHATAAGYASELSALTGAWSGPSSTSMASAAAPYVAWMSATAVHAE
Sbjct 1 MLAAATAWDGLAVELHATAAGYASELSALTGAWSGPSSTSMASAAAPYVAWMSATAVHAE 60
Query 84 LAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVLIATNIFGQNTPAIMMTEAQYMEMW 143
LAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVLIATNIFGQNTPAIMMTEAQYMEMW
Sbjct 61 LAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVLIATNIFGQNTPAIMMTEAQYMEMW 120
Query 144 AQDAAAMYGYAGSSATASRMTAFTEPPQTTNHGQLGAQSSAVAQTAATAAGGNLQSAFPQ 203
AQDAAAMYGYAGSSATASRMTAFTEPPQTTNHGQLGAQSSAVAQTAATAAGGNLQSAFPQ
Sbjct 121 AQDAAAMYGYAGSSATASRMTAFTEPPQTTNHGQLGAQSSAVAQTAATAAGGNLQSAFPQ 180
Query 204 LLSAVPRALQGLALPTASQSASATPQWVTDLGNLSTFLGGAVTGPYTFPGVLPPSGVPYL 263
LLSAVPRALQGLALPTASQSASATPQWVTDLGNLSTFLGGAVTGPYTFPGVLPPSGVPYL
Sbjct 181 LLSAVPRALQGLALPTASQSASATPQWVTDLGNLSTFLGGAVTGPYTFPGVLPPSGVPYL 240
Query 264 LGIQSVLVTQNGQGVSALLGKIGGKPITGALAPLAEFALHTPILGSEGLGGGSVSAGIGR 323
LGIQSVLVTQNGQGVSALLGKIGGKPITGALAPLAEFALHTPILGSEGLGGGSVSAGIGR
Sbjct 241 LGIQSVLVTQNGQGVSALLGKIGGKPITGALAPLAEFALHTPILGSEGLGGGSVSAGIGR 300
Query 324 AGLVGKLSVPQGWTVAAPEIPSPAAALQATRLAAAPIAATDGAGALLGGMALSGLAGRAA 383
AGLVGKLSVPQGWTVAAPEIPSPAAALQATRLAAAPIAATDGAGALLGGMALSGLAGRAA
Sbjct 301 AGLVGKLSVPQGWTVAAPEIPSPAAALQATRLAAAPIAATDGAGALLGGMALSGLAGRAA 360
Query 384 AGSTGHPIGSAAAPAVGAAAAAVEDLATEANIFVIPAMDD 423
AGSTGHPIGSAAAPAVGAAAAAVEDLATEANIFVIPAMDD
Sbjct 361 AGSTGHPIGSAAAPAVGAAAAAVEDLATEANIFVIPAMDD 400
>gi|289745767|ref|ZP_06505145.1| PPE family protein [Mycobacterium tuberculosis 02_1987]
gi|289686295|gb|EFD53783.1| PPE family protein [Mycobacterium tuberculosis 02_1987]
Length=418
Score = 655 bits (1690), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/338 (100%), Positives = 338/338 (100%), Gaps = 0/338 (0%)
Query 1 MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGAWSGPS 60
MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGAWSGPS
Sbjct 1 MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGAWSGPS 60
Query 61 STSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVLI 120
STSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVLI
Sbjct 61 STSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVLI 120
Query 121 ATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTAFTEPPQTTNHGQLGA 180
ATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTAFTEPPQTTNHGQLGA
Sbjct 121 ATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTAFTEPPQTTNHGQLGA 180
Query 181 QSSAVAQTAATAAGGNLQSAFPQLLSAVPRALQGLALPTASQSASATPQWVTDLGNLSTF 240
QSSAVAQTAATAAGGNLQSAFPQLLSAVPRALQGLALPTASQSASATPQWVTDLGNLSTF
Sbjct 181 QSSAVAQTAATAAGGNLQSAFPQLLSAVPRALQGLALPTASQSASATPQWVTDLGNLSTF 240
Query 241 LGGAVTGPYTFPGVLPPSGVPYLLGIQSVLVTQNGQGVSALLGKIGGKPITGALAPLAEF 300
LGGAVTGPYTFPGVLPPSGVPYLLGIQSVLVTQNGQGVSALLGKIGGKPITGALAPLAEF
Sbjct 241 LGGAVTGPYTFPGVLPPSGVPYLLGIQSVLVTQNGQGVSALLGKIGGKPITGALAPLAEF 300
Query 301 ALHTPILGSEGLGGGSVSAGIGRAGLVGKLSVPQGWTV 338
ALHTPILGSEGLGGGSVSAGIGRAGLVGKLSVPQGWTV
Sbjct 301 ALHTPILGSEGLGGGSVSAGIGRAGLVGKLSVPQGWTV 338
>gi|289750372|ref|ZP_06509750.1| PPE family protein [Mycobacterium tuberculosis T92]
gi|289690959|gb|EFD58388.1| PPE family protein [Mycobacterium tuberculosis T92]
Length=333
Score = 646 bits (1667), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/333 (100%), Positives = 333/333 (100%), Gaps = 0/333 (0%)
Query 1 MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGAWSGPS 60
MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGAWSGPS
Sbjct 1 MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGAWSGPS 60
Query 61 STSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVLI 120
STSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVLI
Sbjct 61 STSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVLI 120
Query 121 ATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTAFTEPPQTTNHGQLGA 180
ATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTAFTEPPQTTNHGQLGA
Sbjct 121 ATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTAFTEPPQTTNHGQLGA 180
Query 181 QSSAVAQTAATAAGGNLQSAFPQLLSAVPRALQGLALPTASQSASATPQWVTDLGNLSTF 240
QSSAVAQTAATAAGGNLQSAFPQLLSAVPRALQGLALPTASQSASATPQWVTDLGNLSTF
Sbjct 181 QSSAVAQTAATAAGGNLQSAFPQLLSAVPRALQGLALPTASQSASATPQWVTDLGNLSTF 240
Query 241 LGGAVTGPYTFPGVLPPSGVPYLLGIQSVLVTQNGQGVSALLGKIGGKPITGALAPLAEF 300
LGGAVTGPYTFPGVLPPSGVPYLLGIQSVLVTQNGQGVSALLGKIGGKPITGALAPLAEF
Sbjct 241 LGGAVTGPYTFPGVLPPSGVPYLLGIQSVLVTQNGQGVSALLGKIGGKPITGALAPLAEF 300
Query 301 ALHTPILGSEGLGGGSVSAGIGRAGLVGKLSVP 333
ALHTPILGSEGLGGGSVSAGIGRAGLVGKLSVP
Sbjct 301 ALHTPILGSEGLGGGSVSAGIGRAGLVGKLSVP 333
>gi|289761951|ref|ZP_06521329.1| PPE family protein [Mycobacterium tuberculosis GM 1503]
gi|289709457|gb|EFD73473.1| PPE family protein [Mycobacterium tuberculosis GM 1503]
Length=423
Score = 626 bits (1615), Expect = 2e-177, Method: Compositional matrix adjust.
Identities = 375/423 (89%), Positives = 377/423 (90%), Gaps = 0/423 (0%)
Query 1 MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGAWSGPS 60
MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGAWSGPS
Sbjct 1 MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGAWSGPS 60
Query 61 STSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVLI 120
STSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVLI
Sbjct 61 STSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVLI 120
Query 121 ATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTAFTEPPQTTNHGQLGA 180
ATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTAFTEPPQTTNHGQLGA
Sbjct 121 ATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTAFTEPPQTTNHGQLGA 180
Query 181 QSSAVAQTAATAAGGNLQSAFPQLLSAVPRALQGLALPTASQSASATPQWVTDLGNLSTF 240
QSSAVAQTAATAAGGNLQSAFPQLLSAVPRALQGLALPTASQSASATPQWVTDLGNLSTF
Sbjct 181 QSSAVAQTAATAAGGNLQSAFPQLLSAVPRALQGLALPTASQSASATPQWVTDLGNLSTF 240
Query 241 LGGAVTGPYTFPGVLPPSGVPYLLGIQSVLVTQNGQGVSALLGKIGGKPITGALAPLAEF 300
LGGAVTGPYTFPGVLPPSGVPYLLGIQSVLVTQNGQGVSALLGKIGGKPITGALAPLAEF
Sbjct 241 LGGAVTGPYTFPGVLPPSGVPYLLGIQSVLVTQNGQGVSALLGKIGGKPITGALAPLAEF 300
Query 301 ALHTPILGSEGLGGGSVSAGIGRAGLVGKLSVPQGWTVAAPEIPSPAAALQATRLAAAPI 360
ALHTPILGSEGLGGGSVSAGIGRAGLVGKLSVPQGWTVAAPEIPSPAAALQATRL
Sbjct 301 ALHTPILGSEGLGGGSVSAGIGRAGLVGKLSVPQGWTVAAPEIPSPAAALQATRLGRRAD 360
Query 361 AATDGAGALLGGMALSGLAGRAAAGSTGHPIGSAAAPAVGAAAAAVEDLATEANIFVIPA 420
G + GL P + DLATEANIFVIPA
Sbjct 361 CGHRRRGCVARWHGAVGLGWPRCRRFYRPPHRQRRSTRRRCRCRCRRDLATEANIFVIPA 420
Query 421 MDD 423
MDD
Sbjct 421 MDD 423
>gi|289757904|ref|ZP_06517282.1| PPE family protein [Mycobacterium tuberculosis T85]
gi|289713468|gb|EFD77480.1| PPE family protein [Mycobacterium tuberculosis T85]
Length=305
Score = 594 bits (1532), Expect = 7e-168, Method: Compositional matrix adjust.
Identities = 305/305 (100%), Positives = 305/305 (100%), Gaps = 0/305 (0%)
Query 1 MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGAWSGPS 60
MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGAWSGPS
Sbjct 1 MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGAWSGPS 60
Query 61 STSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVLI 120
STSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVLI
Sbjct 61 STSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVLI 120
Query 121 ATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTAFTEPPQTTNHGQLGA 180
ATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTAFTEPPQTTNHGQLGA
Sbjct 121 ATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTAFTEPPQTTNHGQLGA 180
Query 181 QSSAVAQTAATAAGGNLQSAFPQLLSAVPRALQGLALPTASQSASATPQWVTDLGNLSTF 240
QSSAVAQTAATAAGGNLQSAFPQLLSAVPRALQGLALPTASQSASATPQWVTDLGNLSTF
Sbjct 181 QSSAVAQTAATAAGGNLQSAFPQLLSAVPRALQGLALPTASQSASATPQWVTDLGNLSTF 240
Query 241 LGGAVTGPYTFPGVLPPSGVPYLLGIQSVLVTQNGQGVSALLGKIGGKPITGALAPLAEF 300
LGGAVTGPYTFPGVLPPSGVPYLLGIQSVLVTQNGQGVSALLGKIGGKPITGALAPLAEF
Sbjct 241 LGGAVTGPYTFPGVLPPSGVPYLLGIQSVLVTQNGQGVSALLGKIGGKPITGALAPLAEF 300
Query 301 ALHTP 305
ALHTP
Sbjct 301 ALHTP 305
>gi|254550809|ref|ZP_05141256.1| PPE family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
Length=284
Score = 553 bits (1426), Expect = 1e-155, Method: Compositional matrix adjust.
Identities = 284/284 (100%), Positives = 284/284 (100%), Gaps = 0/284 (0%)
Query 1 MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGAWSGPS 60
MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGAWSGPS
Sbjct 1 MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGAWSGPS 60
Query 61 STSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVLI 120
STSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVLI
Sbjct 61 STSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVLI 120
Query 121 ATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTAFTEPPQTTNHGQLGA 180
ATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTAFTEPPQTTNHGQLGA
Sbjct 121 ATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTAFTEPPQTTNHGQLGA 180
Query 181 QSSAVAQTAATAAGGNLQSAFPQLLSAVPRALQGLALPTASQSASATPQWVTDLGNLSTF 240
QSSAVAQTAATAAGGNLQSAFPQLLSAVPRALQGLALPTASQSASATPQWVTDLGNLSTF
Sbjct 181 QSSAVAQTAATAAGGNLQSAFPQLLSAVPRALQGLALPTASQSASATPQWVTDLGNLSTF 240
Query 241 LGGAVTGPYTFPGVLPPSGVPYLLGIQSVLVTQNGQGVSALLGK 284
LGGAVTGPYTFPGVLPPSGVPYLLGIQSVLVTQNGQGVSALLGK
Sbjct 241 LGGAVTGPYTFPGVLPPSGVPYLLGIQSVLVTQNGQGVSALLGK 284
>gi|183981478|ref|YP_001849769.1| PPE family protein [Mycobacterium marinum M]
gi|183174804|gb|ACC39914.1| PPE family protein [Mycobacterium marinum M]
Length=427
Score = 317 bits (813), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 223/436 (52%), Positives = 266/436 (62%), Gaps = 22/436 (5%)
Query 1 MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTG-AWSGP 59
MDFG LPPEINSGRMY GPG GPMLAAA WD LA EL+ATAAGY S L LTG +W GP
Sbjct 1 MDFGALPPEINSGRMYVGPGSGPMLAAAVVWDELAAELYATAAGYRSTLDGLTGGSWRGP 60
Query 60 SSTSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVL 119
+S SMA+AAAPYVAWM+ATA AELAG+QA++A +AYE AFAATVPPPVIAANRA LM L
Sbjct 61 ASASMAAAAAPYVAWMTATAAQAELAGSQAKVAASAYETAFAATVPPPVIAANRALLMGL 120
Query 120 IATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTAFTEPPQTTNHGQLG 179
+ TNIFGQNTPAI TEA Y EMWAQDAAAMY YAGSSATA+++T FTEPPQ T+
Sbjct 121 VFTNIFGQNTPAIAATEAHYAEMWAQDAAAMYAYAGSSATATQVTPFTEPPQITSPSGAV 180
Query 180 AQSSAVAQTAATAAGGNLQSAFPQLLSAVPRALQGLA-----------LPTASQSASATP 228
+Q++AV + A +A ++ + L++ VP ALQG+A LP + A
Sbjct 181 SQAAAVTEAATASASSDITAQLSPLIAVVPNALQGMATSGNPAAAIAGLPDVALPAGI-- 238
Query 229 QWVTDLGNLSTFLGGAVTGPYTFPGVLPPSGVPYLLGIQSVLVTQNGQGVSALLGKIGGK 288
+TDL N +T L + GP+T G+ G P+L Q +QN G A +
Sbjct 239 --ITDLQNFTTIL-DTLDGPFTIQGLTGVPGGPFLAFGQVYAFSQNMVGAQAFFSP--AE 293
Query 289 PITGALAPLA-EFALHTPILGSEGLGGGSVSAGIGRAGLVGKLSVPQGWTVAAPEIPSPA 347
P+ G LAPLA E L + GG S +G A LVG +SVPQGWT AP I
Sbjct 294 PVIGGLAPLAGEANLGAAGVVGGPSVGGQASGAMGHAALVGNMSVPQGWTQEAPAIRVFV 353
Query 348 AALQATRLAAAPIAATDGAGALLGGMALSGLAGRAAAGSTGHPIGSAAAPAVGAAAAAVE 407
+ L T + AAP A G A+ MALS LAGRA G A A
Sbjct 354 SELP-TSVTAAPAATLAGESAVFNQMALSSLAGRALGTGAFGSGGGGGASKAIGGVVAEA 412
Query 408 DLATEANIFVIPAMDD 423
D A A I VIPA++D
Sbjct 413 DPAA-ATIIVIPAIED 427
>gi|240171262|ref|ZP_04749921.1| PPE family protein [Mycobacterium kansasii ATCC 12478]
Length=415
Score = 297 bits (761), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 223/428 (53%), Positives = 270/428 (64%), Gaps = 26/428 (6%)
Query 1 MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGAWSGPS 60
+DFG LPPEINSGRMY GPG GPMLAAA AWD LA LH+TAA Y+S +S LT W GP+
Sbjct 3 IDFGALPPEINSGRMYIGPGSGPMLAAAAAWDSLAAGLHSTAASYSSVISGLTAGWQGPA 62
Query 61 STSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVLI 120
S +MA+AAAPY AW++ATA AE QAR+A A+E AFAATVPPP + ANRAQLM LI
Sbjct 63 SITMAAAAAPYTAWINATAAQAEQTATQARVAAVAFETAFAATVPPPAVTANRAQLMALI 122
Query 121 ATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTAFTEPPQTTNHGQLGA 180
ATN FGQNTPAIM T+A+Y+EMWAQDAAAMYGYAGSSATAS++T F+EPPQ N
Sbjct 123 ATNFFGQNTPAIMGTQAEYIEMWAQDAAAMYGYAGSSATASQVTPFSEPPQIANPAGTEW 182
Query 181 QSSAVAQTAATAAGGNLQSAFPQLLSAVPRALQGLALPTASQSASATPQWVTDL---GNL 237
Q++AVA+ + AG S PQL+S VP +LQ LA P +S + +A +L
Sbjct 183 QAAAVARATSAVAGMQTMS-LPQLMSGVPSSLQSLAAPGSSTALAAAADPTAPASLASSL 241
Query 238 STFLGGAVTGPYTFPGVLPPSGVPYLLGIQSVLVTQNGQGVSALLGKIGGKPITGALAPL 297
+T + +TGP + + +GVPYLLGIQS L+ QN V+ A
Sbjct 242 NTII-STITGPSSALSLFTIAGVPYLLGIQSYLLPQNVANVANA-----------ASKVS 289
Query 298 AEFALHTPILGSEGLGGG---SVSAGIGRAGLVGKLSVPQGWTVAAPEIPSPAAALQATR 354
A A +G GGG + SAG+GRAGLVG LSVPQGW ++AP + AA
Sbjct 290 AASASSGGWVGVGSAGGGLSSAASAGMGRAGLVGGLSVPQGWAMSAPAVKPVAAVFAENG 349
Query 355 LAAAP-IAATDGAGALLGGMALSGLAGRAAAGSTGHPIGSAAAPAVGAAAAAVEDLAT-E 412
L AP AAT G G+L MALSGLAGRA P G AA + GA A A+
Sbjct 350 LTGAPAAAATQGEGSLFSNMALSGLAGRAMV-----PTGGTAARSSGATGGATAGEASGP 404
Query 413 ANIFVIPA 420
NIF++PA
Sbjct 405 VNIFIVPA 412
>gi|57116921|ref|YP_177844.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
gi|148661614|ref|YP_001283137.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
gi|148823021|ref|YP_001287775.1| PPE family protein [Mycobacterium tuberculosis F11]
9 more sequence titles
Length=409
Score = 289 bits (740), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 229/421 (55%), Positives = 273/421 (65%), Gaps = 14/421 (3%)
Query 1 MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGA-WSGP 59
MDFG LPPEINSGRMY GPG GP+LAAA AWD LA EL++ AA Y S + LT A W GP
Sbjct 1 MDFGALPPEINSGRMYAGPGSGPLLAAAAAWDALAAELYSAAASYGSTIEGLTVAPWMGP 60
Query 60 SSTSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVL 119
SS +MA+A APYVAW+S TA AE AGAQA++A YE AFAATVPPPVI ANRA LM L
Sbjct 61 SSITMAAAVAPYVAWISVTAGQAEQAGAQAKIAAGVYETAFAATVPPPVIEANRALLMSL 120
Query 120 IATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTAFTEPPQTTNHGQLG 179
+ATNIFGQNTPAI TEA Y EMWAQDAAAMYGYAGSSATAS++ F+EPPQTTN
Sbjct 121 VATNIFGQNTPAIAATEAHYAEMWAQDAAAMYGYAGSSATASQLAPFSEPPQTTNPSATA 180
Query 180 AQSSAVAQTAATAAGGNLQSAFPQLLSAVPRALQGLALPTASQSASATPQWVTDLGNLST 239
AQS+ VAQ A AA ++ + QL+S +P LQ LA T + + SA+ W T L +++T
Sbjct 181 AQSAVVAQAAGAAASSDITAQLSQLISLLPSTLQSLA--TTATATSASAGWDTVLQSITT 238
Query 240 FLGGAVTGPYTFPGVLPPSGVPYLLGIQSVLVTQNGQGVSALLGKIGGKPITGALAPLAE 299
L +TGPY+ G+ G +L Q + + QN GV+ALLG K GAL+PLA
Sbjct 239 ILAN-LTGPYSIIGLGAIPGGWWLTFGQILGLAQNAPGVAALLGP---KAAAGALSPLAP 294
Query 300 FALHTPILGSEGLGGGSVSAGIGRAGLVGKLSVPQGWTVAAPEIPSPAAALQATRLAAAP 359
L +G GG + GI RA VG LSVPQGW AAP + + A+ L T A A
Sbjct 295 --LRGGYIGDITPLGGGATGGIARAIYVGSLSVPQGWAEAAPVMRAVASVLPGTGAAPA- 351
Query 360 IAATDGAGALLGGMALSGLAGRAAAGSTGHPIGSAAAPAVGAAAAAVEDLATEANIFVIP 419
A + GAL G MALS LAGRA AG+ + S A A A + ED+A+ I VIP
Sbjct 352 -LAAEAPGALFGEMALSSLAGRALAGTA---VRSGAGAARVAGGSVTEDVASTTTIIVIP 407
Query 420 A 420
A
Sbjct 408 A 408
>gi|31792997|ref|NP_855490.1| PPE family protein [Mycobacterium bovis AF2122/97]
gi|121637710|ref|YP_977933.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224990194|ref|YP_002644881.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172]
29 more sequence titles
Length=409
Score = 289 bits (739), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 230/426 (54%), Positives = 274/426 (65%), Gaps = 24/426 (5%)
Query 1 MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGA-WSGP 59
MDFG LPPEINSGRMY GPG GP+LAAA AWD LA EL++ AA Y S + LT A W GP
Sbjct 1 MDFGALPPEINSGRMYAGPGSGPLLAAAAAWDALAAELYSAAASYGSTIEGLTVAPWMGP 60
Query 60 SSTSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVL 119
SS +MA+A APYVAW+S TA AE AGAQA++A YE AFAATVPPPVI ANRA LM L
Sbjct 61 SSITMAAAVAPYVAWISVTAGQAEQAGAQAKIAAGVYETAFAATVPPPVIEANRALLMSL 120
Query 120 IATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTAFTEPPQTTNHGQLG 179
+ATNIFGQNTPAI TEA Y EMWAQDAAAMYGYAGSSATAS++ F+EPPQTTN
Sbjct 121 VATNIFGQNTPAIAATEAHYAEMWAQDAAAMYGYAGSSATASQLAPFSEPPQTTNPSATA 180
Query 180 AQSSAVAQTAATAAGGNLQSAFPQLLSAVPRALQGLALPTASQSASATPQWVTDLGNLST 239
AQS+ VAQ A AA ++ + QL+S +P LQ LA T + + SA+ W T L +++T
Sbjct 181 AQSAVVAQAAGAAASSDITAQLSQLISLLPSTLQSLA--TTATATSASAGWDTVLQSITT 238
Query 240 FLGGAVTGPYTFPGVLPPSGVPYLLGIQSVLVTQNGQGVSALLGKIGGKPITGALAPLA- 298
L +TGPY+ G+ G +L Q + + QN GV+ALLG K GAL+PLA
Sbjct 239 ILAN-LTGPYSIIGLGAIPGGWWLTFGQILGLAQNAPGVAALLGP---KAAAGALSPLAP 294
Query 299 ----EFALHTPILGSEGLGGGSVSAGIGRAGLVGKLSVPQGWTVAAPEIPSPAAALQATR 354
A TP+ GG + GI RA VG LSVPQGW AAP + + A+ L T
Sbjct 295 LRGGYIADITPL-------GGGATGGIARAIYVGSLSVPQGWAEAAPVMRAVASVLPGTG 347
Query 355 LAAAPIAATDGAGALLGGMALSGLAGRAAAGSTGHPIGSAAAPAVGAAAAAVEDLATEAN 414
A A A + GAL G MALS LAGRA AG+ + S A A A + ED+A+
Sbjct 348 AAPA--LAAEAPGALFGEMALSSLAGRALAGTA---VRSGAGAARVAGGSVTEDVASTTT 402
Query 415 IFVIPA 420
I VIPA
Sbjct 403 IIVIPA 408
>gi|167967397|ref|ZP_02549674.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
gi|253799148|ref|YP_003032149.1| PPE family protein [Mycobacterium tuberculosis KZN 1435]
gi|254231990|ref|ZP_04925317.1| PPE family protein [Mycobacterium tuberculosis C]
24 more sequence titles
Length=410
Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 228/421 (55%), Positives = 273/421 (65%), Gaps = 14/421 (3%)
Query 1 MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGA-WSGP 59
+DFG LPPEINSGRMY GPG GP+LAAA AWD LA EL++ AA Y S + LT A W GP
Sbjct 2 LDFGALPPEINSGRMYAGPGSGPLLAAAAAWDALAAELYSAAASYGSTIEGLTVAPWMGP 61
Query 60 SSTSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVL 119
SS +MA+A APYVAW+S TA AE AGAQA++A YE AFAATVPPPVI ANRA LM L
Sbjct 62 SSITMAAAVAPYVAWISVTAGQAEQAGAQAKIAAGVYETAFAATVPPPVIEANRALLMSL 121
Query 120 IATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTAFTEPPQTTNHGQLG 179
+ATNIFGQNTPAI TEA Y EMWAQDAAAMYGYAGSSATAS++ F+EPPQTTN
Sbjct 122 VATNIFGQNTPAIAATEAHYAEMWAQDAAAMYGYAGSSATASQLAPFSEPPQTTNPSATA 181
Query 180 AQSSAVAQTAATAAGGNLQSAFPQLLSAVPRALQGLALPTASQSASATPQWVTDLGNLST 239
AQS+ VAQ A AA ++ + QL+S +P LQ LA T + + SA+ W T L +++T
Sbjct 182 AQSAVVAQAAGAAASSDITAQLSQLISLLPSTLQSLA--TTATATSASAGWDTVLQSITT 239
Query 240 FLGGAVTGPYTFPGVLPPSGVPYLLGIQSVLVTQNGQGVSALLGKIGGKPITGALAPLAE 299
L +TGPY+ G+ G +L Q + + QN GV+ALLG K GAL+PLA
Sbjct 240 ILAN-LTGPYSIIGLGAIPGGWWLTFGQILGLAQNAPGVAALLGP---KAAAGALSPLAP 295
Query 300 FALHTPILGSEGLGGGSVSAGIGRAGLVGKLSVPQGWTVAAPEIPSPAAALQATRLAAAP 359
L +G GG + GI RA VG LSVPQGW AAP + + A+ L T A A
Sbjct 296 --LRGGYIGDITPLGGGATGGIARAIYVGSLSVPQGWAEAAPVMRAVASVLPGTGAAPA- 352
Query 360 IAATDGAGALLGGMALSGLAGRAAAGSTGHPIGSAAAPAVGAAAAAVEDLATEANIFVIP 419
A + GAL G MALS LAGRA AG+ + S A A A + ED+A+ I VIP
Sbjct 353 -LAAEAPGALFGEMALSSLAGRALAGTA---VRSGAGAARVAGGSVTEDVASTTTIIVIP 408
Query 420 A 420
A
Sbjct 409 A 409
>gi|294996719|ref|ZP_06802410.1| PPE family protein [Mycobacterium tuberculosis 210]
gi|13377907|gb|AAK20893.1| Rv1808-like protein [Mycobacterium microti]
gi|13377909|gb|AAK20894.1| Rv1808-like protein [Mycobacterium microti]
gi|339294744|gb|AEJ46855.1| PPE family protein [Mycobacterium tuberculosis CCDC5079]
gi|339298372|gb|AEJ50482.1| PPE family protein [Mycobacterium tuberculosis CCDC5180]
Length=410
Score = 287 bits (735), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 229/426 (54%), Positives = 274/426 (65%), Gaps = 24/426 (5%)
Query 1 MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGA-WSGP 59
+DFG LPPEINSGRMY GPG GP+LAAA AWD LA EL++ AA Y S + LT A W GP
Sbjct 2 LDFGALPPEINSGRMYAGPGSGPLLAAAAAWDALAAELYSAAASYGSTIEGLTVAPWMGP 61
Query 60 SSTSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVL 119
SS +MA+A APYVAW+S TA AE AGAQA++A YE AFAATVPPPVI ANRA LM L
Sbjct 62 SSITMAAAVAPYVAWISVTAGQAEQAGAQAKIAAGVYETAFAATVPPPVIEANRALLMSL 121
Query 120 IATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTAFTEPPQTTNHGQLG 179
+ATNIFGQNTPAI TEA Y EMWAQDAAAMYGYAGSSATAS++ F+EPPQTTN
Sbjct 122 VATNIFGQNTPAIAATEAHYAEMWAQDAAAMYGYAGSSATASQLAPFSEPPQTTNPSATA 181
Query 180 AQSSAVAQTAATAAGGNLQSAFPQLLSAVPRALQGLALPTASQSASATPQWVTDLGNLST 239
AQS+ VAQ A AA ++ + QL+S +P LQ LA T + + SA+ W T L +++T
Sbjct 182 AQSAVVAQAAGAAASSDITAQLSQLISLLPSTLQSLA--TTATATSASAGWDTVLQSITT 239
Query 240 FLGGAVTGPYTFPGVLPPSGVPYLLGIQSVLVTQNGQGVSALLGKIGGKPITGALAPLA- 298
L +TGPY+ G+ G +L Q + + QN GV+ALLG K GAL+PLA
Sbjct 240 ILAN-LTGPYSIIGLGAIPGGWWLTFGQILGLAQNAPGVAALLGP---KAAAGALSPLAP 295
Query 299 ----EFALHTPILGSEGLGGGSVSAGIGRAGLVGKLSVPQGWTVAAPEIPSPAAALQATR 354
A TP+ GG + GI RA VG LSVPQGW AAP + + A+ L T
Sbjct 296 LRGGYIADITPL-------GGGATGGIARAIYVGSLSVPQGWAEAAPVMRAVASVLPGTG 348
Query 355 LAAAPIAATDGAGALLGGMALSGLAGRAAAGSTGHPIGSAAAPAVGAAAAAVEDLATEAN 414
A A A + GAL G MALS LAGRA AG+ + S A A A + ED+A+
Sbjct 349 AAPA--LAAEAPGALFGEMALSSLAGRALAGTA---VRSGAGAARVAGGSVTEDVASTTT 403
Query 415 IFVIPA 420
I VIPA
Sbjct 404 IIVIPA 409
>gi|240172862|ref|ZP_04751521.1| PPE family protein [Mycobacterium kansasii ATCC 12478]
Length=431
Score = 286 bits (732), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 236/436 (55%), Positives = 286/436 (66%), Gaps = 19/436 (4%)
Query 1 MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALT-GAWSGP 59
+DFG LPPEINSGRMY GPG GPMLAAA AW LA EL + AA Y S + +LT G+W+GP
Sbjct 2 IDFGALPPEINSGRMYVGPGAGPMLAAAAAWQELAAELQSMAASYRSIVESLTVGSWTGP 61
Query 60 SSTSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVL 119
SS +MA+A APY+AW+++T AE A AQA A AAYE AFAATVPPPVIAANRA LM L
Sbjct 62 SSIAMAAAVAPYLAWINSTGAQAEQAAAQAAAAAAAYETAFAATVPPPVIAANRALLMAL 121
Query 120 IATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTAFTEPPQTTNHGQLG 179
IATNIFGQNTPAI TEA+Y+EMWAQDAAAMY YAGSSATA+++T FTEPP TTN
Sbjct 122 IATNIFGQNTPAIAATEAEYLEMWAQDAAAMYAYAGSSATAAQLTPFTEPPATTNPSAAA 181
Query 180 AQSSAVAQTAATAAGGNLQSAFPQLLSAVPRALQGLA----LPTASQS-------ASATP 228
AQS+AVA A TAA ++ + QL+++VP ALQ LA LPTA+ S A P
Sbjct 182 AQSAAVAPAAGTAAASDITTQLSQLIASVPNALQSLASTTSLPTAAPSLPGSIFPLPALP 241
Query 229 QWV-TDLGNLSTFLGGAVTGPYTFPGVLPPSGVPYLLGIQSVLVTQNGQGVSALLGKIGG 287
W+ TD+ N + + A+ GPY+ G+ G P+L Q QN QG+ A
Sbjct 242 PWLATDIDNWNIIM-AALNGPYSLQGLAAIPGGPFLSFGQVYAYAQNAQGLQAFFAP--S 298
Query 288 KPITGALAPLAEFALHTPILGSEGLGGGSVSAGIGRAGLVGKLSVPQGWTVAAPEIPSPA 347
KPITGALAP+A+ S G GGG V+ +GRA LVG ++VPQGWT AAP +
Sbjct 299 KPITGALAPIADSLGANLTSSSAGSGGGPVTGAMGRAALVGSMAVPQGWTQAAPAM-RLV 357
Query 348 AALQATRLAAAPIAATDGAGALLGGMALSGLAGRAAAGSTGHPIGSAAAPAVGAAAAAVE 407
++L T LAAAP AA G + G MALS LAGRA A +T GS A ++G A +
Sbjct 358 SSLLPTNLAAAPAAAFSGEAGVFGQMALSSLAGRALAATTFGSAGSGTASSLGGVVAGAD 417
Query 408 DLATEANIFVIPAMDD 423
A A I VIPA+D+
Sbjct 418 PAA--ATIIVIPALDE 431
>gi|308372058|ref|ZP_07427232.2| putative PPE family protein [Mycobacterium tuberculosis SUMu004]
gi|308334577|gb|EFP23428.1| putative PPE family protein [Mycobacterium tuberculosis SUMu004]
Length=399
Score = 279 bits (713), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 216/387 (56%), Positives = 257/387 (67%), Gaps = 11/387 (2%)
Query 1 MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGA-WSGP 59
+DFG LPPEINSGRMY GPG GP+LAAA AWD LA EL++ AA Y S + LT A W GP
Sbjct 2 LDFGALPPEINSGRMYAGPGSGPLLAAAAAWDALAAELYSAAASYGSTIEGLTVAPWMGP 61
Query 60 SSTSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVL 119
SS +MA+A APYVAW+S TA AE AGAQA++A YE AFAATVPPPVI ANRA LM L
Sbjct 62 SSITMAAAVAPYVAWISVTAGQAEQAGAQAKIAAGVYETAFAATVPPPVIEANRALLMSL 121
Query 120 IATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTAFTEPPQTTNHGQLG 179
+ATNIFGQNTPAI TEA Y EMWAQDAAAMYGYAGSSATAS++ F+EPPQTTN
Sbjct 122 VATNIFGQNTPAIAATEAHYAEMWAQDAAAMYGYAGSSATASQLAPFSEPPQTTNPSATA 181
Query 180 AQSSAVAQTAATAAGGNLQSAFPQLLSAVPRALQGLALPTASQSASATPQWVTDLGNLST 239
AQS+ VAQ A AA ++ + QL+S +P LQ LA T + + SA+ W T L +++T
Sbjct 182 AQSAVVAQAAGAAASSDITAQLSQLISLLPSTLQSLA--TTATATSASAGWDTVLQSITT 239
Query 240 FLGGAVTGPYTFPGVLPPSGVPYLLGIQSVLVTQNGQGVSALLGKIGGKPITGALAPLAE 299
L +TGPY+ G+ G +L Q + + QN GV+ALLG K GAL+PLA
Sbjct 240 ILAN-LTGPYSIIGLGAIPGGWWLTFGQILGLAQNAPGVAALLGP---KAAAGALSPLAP 295
Query 300 FALHTPILGSEGLGGGSVSAGIGRAGLVGKLSVPQGWTVAAPEIPSPAAALQATRLAAAP 359
L +G GG + GI RA VG LSVPQGW AAP + + A+ L T A A
Sbjct 296 --LRGGYIGDITPLGGGATGGIARAIYVGSLSVPQGWAEAAPVMRAVASVLPGTGAAPA- 352
Query 360 IAATDGAGALLGGMALSGLAGRAAAGS 386
A + GAL G MALS LAGRA AG+
Sbjct 353 -LAAEAPGALFGEMALSSLAGRALAGT 378
>gi|183982691|ref|YP_001850982.1| PPE family protein, PPE32 [Mycobacterium marinum M]
gi|183176017|gb|ACC41127.1| PPE family protein, PPE32 [Mycobacterium marinum M]
Length=426
Score = 272 bits (696), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 228/438 (53%), Positives = 281/438 (65%), Gaps = 28/438 (6%)
Query 1 MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGA-WSGP 59
+DFG LPPEINSGRMY GPG P++AAA AWD LA EL + AA Y S + LT A W+G
Sbjct 2 IDFGALPPEINSGRMYVGPGAAPLIAAAAAWDELAAELQSMAASYGSTVQGLTVAPWTGA 61
Query 60 SSTSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVL 119
SS +MA+AAAPYV W++ T V AE A QA+LA AYE AFAATVPPPVIAANRA LM L
Sbjct 62 SSITMAAAAAPYVTWINTTGVQAEQAATQAKLAAGAYETAFAATVPPPVIAANRALLMAL 121
Query 120 IATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTAFTEPPQTTNHGQLG 179
IATNIFGQNTPAI EAQY+EMWAQDAAAMY YAG++A AS +T FTEPPQTTN
Sbjct 122 IATNIFGQNTPAIAAAEAQYLEMWAQDAAAMYAYAGTAAAASALTPFTEPPQTTNPVAGA 181
Query 180 AQSSAVAQTAATAAGGNLQSAFPQLLSAVPRALQGLALPTASQSAS------ATPQWV-T 232
AQS+AVAQ ++TAA ++ S L+++VP ALQ LA +A+ +A+ + P W+ T
Sbjct 182 AQSAAVAQASSTAASSDVVSQLAGLITSVPNALQTLATTSAAPTAASILPEVSLPPWLAT 241
Query 233 DLGNLSTFLGGAVTGPYTFPGVLPPSGVPYLLGIQSVLVTQNGQGVSALLGKIGGKPITG 292
+L N +T + +TGP++ G+ G P+L Q QN QG++A K ITG
Sbjct 242 NLANWNTIM-ATLTGPFSLQGISSIPGGPFLSFGQVYAYVQNAQGLNAFYSP---KAITG 297
Query 293 ALAPLAEFALHTPILGSEGLG------GGSVSAGIGRAGLVGKLSVPQGWTVAAPEIPSP 346
LAPL P + G+G SVS +GRA LVG +SVPQGWT AAP +
Sbjct 298 TLAPL------VPEISPGGVGLTSASVSNSVSGTMGRAALVGSMSVPQGWTQAAPAMRLV 351
Query 347 AAALQATRLAAAPIAATDGAGALLGGMALSGLAGRAAAGST-GHPIGSAAAPAVGAAAAA 405
++ L +T LAAAP A G + G MALS LAGRA ST G G A A ++G A
Sbjct 352 SSVL-STNLAAAPTAGLPGEAGVFGQMALSSLAGRAMGASTFGSSSGGAVANSLGGVVAE 410
Query 406 VEDLATEANIFVIPAMDD 423
+ A A I VIPA+D+
Sbjct 411 ADPAA--ATIIVIPALDE 426
>gi|296170356|ref|ZP_06851947.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295895079|gb|EFG74798.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=409
Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 210/379 (56%), Positives = 251/379 (67%), Gaps = 14/379 (3%)
Query 1 MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGAWSGPS 60
+DFG+LPPEINS RMYTGPG GPMLAAA AWD LA +LHATAA +S +S LT W GP+
Sbjct 3 IDFGMLPPEINSTRMYTGPGAGPMLAAAAAWDELAAQLHATAASQSSVVSGLTAQWRGPA 62
Query 61 STSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVLI 120
S +MA+AAAPY AWMS A AEL QAR A AAYE AFAATVPP +AANRA+L+ L+
Sbjct 63 SETMAAAAAPYTAWMSTAAGQAELTAGQARAAAAAYETAFAATVPPVSVAANRARLLALV 122
Query 121 ATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTAFTEPPQTTNHGQLGA 180
ATN FGQNTPAIM T+A+Y EMWAQDAAAMYGYA SSATA+++T F PPQTTN
Sbjct 123 ATNFFGQNTPAIMATQAEYAEMWAQDAAAMYGYAASSATAAQVTPFAPPPQTTNPAGAPE 182
Query 181 QSSAVAQTAATAAGGNLQSAFPQLLSAVPRALQGLALPTASQSASATPQWVTDLGNLSTF 240
Q+++V Q ATAAG PQL+SA P+ALQ LA P + + +A P D +L +
Sbjct 183 QAASVGQATATAAGAQATR-LPQLMSATPQALQSLAAPMQAAAPAAAPAAAADPPSLFSA 241
Query 241 LGGAVTGPYTFPGVLPPSGVPYLLGIQSVLVTQNGQGVSALLGKIGGKPITGALAPLAEF 300
L G +TGP + + GVPYLLGIQS L Q G ++ + + ALA
Sbjct 242 LDGFITGPLSPASLFTIPGVPYLLGIQSYLTPQAGANLTR-----ASENYSKALA----- 291
Query 301 ALHTPILGSEGLGGGSVSAGIGRAGLVGKLSVPQGWTVAAPEIPSPAAAL-QATRLAAAP 359
G + VSAG+GRAGLVG LSVPQGW AAPEI + AA L Q++ AA
Sbjct 292 --KADAAGVPRMVSAPVSAGVGRAGLVGGLSVPQGWASAAPEIKTIAATLPQSSLSAAPA 349
Query 360 IAATDGAGALLGGMALSGL 378
A DG G+L+G MALSGL
Sbjct 350 ALAADGQGSLVGNMALSGL 368
>gi|118618457|ref|YP_906789.1| PPE family protein [Mycobacterium ulcerans Agy99]
gi|118570567|gb|ABL05318.1| PPE family protein [Mycobacterium ulcerans Agy99]
Length=426
Score = 269 bits (687), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 227/438 (52%), Positives = 280/438 (64%), Gaps = 28/438 (6%)
Query 1 MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGA-WSGP 59
+DFG LPPEINSGRMY GPG P++AAA AWD LA EL + AA Y S + LT A W+G
Sbjct 2 IDFGALPPEINSGRMYVGPGAAPLIAAAAAWDELAAELQSMAASYGSTVQGLTVAPWTGA 61
Query 60 SSTSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVL 119
SS +MA+AAAPYV W++ T V AE A QA+LA AYE A AATVPPPVIAANRA LM L
Sbjct 62 SSITMAAAAAPYVTWINTTGVQAEQAATQAKLAAGAYETASAATVPPPVIAANRALLMAL 121
Query 120 IATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTAFTEPPQTTNHGQLG 179
IATNIFGQNTPAI EAQY+EMWAQDAAAMY YAG++A AS +T FTEPPQTTN
Sbjct 122 IATNIFGQNTPAIAAAEAQYLEMWAQDAAAMYAYAGTAAAASALTPFTEPPQTTNPVAGA 181
Query 180 AQSSAVAQTAATAAGGNLQSAFPQLLSAVPRALQGLALPTASQSAS------ATPQWV-T 232
AQS+AVAQ ++TAA ++ S L+++VP ALQ LA +A+ +A+ + P W+ T
Sbjct 182 AQSAAVAQASSTAASSDVVSQLAGLITSVPNALQTLATTSAAPTAASILPEVSLPPWLAT 241
Query 233 DLGNLSTFLGGAVTGPYTFPGVLPPSGVPYLLGIQSVLVTQNGQGVSALLGKIGGKPITG 292
+L N +T + +TGP++ G+ G P+L Q QN QG++A K ITG
Sbjct 242 NLANWNTIM-ATLTGPFSLQGISSIPGGPFLSFGQVYAYVQNAQGLNAFYSP---KAITG 297
Query 293 ALAPLAEFALHTPILGSEGLG------GGSVSAGIGRAGLVGKLSVPQGWTVAAPEIPSP 346
LAPL P + G+G SVS +GRA LVG +SVPQGWT AAP +
Sbjct 298 TLAPL------VPEISPGGVGLTSASVSNSVSGTMGRAALVGSMSVPQGWTQAAPAMRLV 351
Query 347 AAALQATRLAAAPIAATDGAGALLGGMALSGLAGRAAAGST-GHPIGSAAAPAVGAAAAA 405
++ L +T LAAAP A G + G MALS LAGRA ST G G A A ++G A
Sbjct 352 SSVL-STNLAAAPTAGLPGEAGVFGQMALSSLAGRAMGASTFGSSSGGAVANSLGGVVAE 410
Query 406 VEDLATEANIFVIPAMDD 423
+ A A I VIPA+D+
Sbjct 411 ADPAA--ATIIVIPALDE 426
>gi|307084423|ref|ZP_07493536.1| putative PPE family protein [Mycobacterium tuberculosis SUMu012]
gi|308365983|gb|EFP54834.1| putative PPE family protein [Mycobacterium tuberculosis SUMu012]
Length=336
Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 195/342 (58%), Positives = 231/342 (68%), Gaps = 9/342 (2%)
Query 1 MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGA-WSGP 59
+DFG LPPEINSGRMY GPG GP+LAAA AWD LA EL++ AA Y S + LT A W GP
Sbjct 2 LDFGALPPEINSGRMYAGPGSGPLLAAAAAWDALAAELYSAAASYGSTIEGLTVAPWMGP 61
Query 60 SSTSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVL 119
SS +MA+A APYVAW+S TA AE AGAQA++A YE AFAATVPPPVI ANRA LM L
Sbjct 62 SSITMAAAVAPYVAWISVTAGQAEQAGAQAKIAAGVYETAFAATVPPPVIEANRALLMSL 121
Query 120 IATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTAFTEPPQTTNHGQLG 179
+ATNIFGQNTPAI TEA Y EMWAQDAAAMYGYAGSSATAS++ F+EPPQTTN
Sbjct 122 VATNIFGQNTPAIAATEAHYAEMWAQDAAAMYGYAGSSATASQLAPFSEPPQTTNPSATA 181
Query 180 AQSSAVAQTAATAAGGNLQSAFPQLLSAVPRALQGLALPTASQSASATPQWVTDLGNLST 239
AQS+ VAQ A AA ++ + QL+S +P LQ LA T + + SA+ W T L +++T
Sbjct 182 AQSAVVAQAAGAAASSDITAQLSQLISLLPSTLQSLA--TTATATSASAGWDTVLQSITT 239
Query 240 FLGGAVTGPYTFPGVLPPSGVPYLLGIQSVLVTQNGQGVSALLGKIGGKPITGALAPLAE 299
L +TGPY+ G+ G +L Q + + QN GV+ALLG K GAL+PLA
Sbjct 240 ILAN-LTGPYSIIGLGAIPGGWWLTFGQILGLAQNAPGVAALLGP---KAAAGALSPLAP 295
Query 300 FALHTPILGSEGLGGGSVSAGIGRAGLVGKLSVPQGWTVAAP 341
L +G GG + GI RA VG LSVPQGW AAP
Sbjct 296 --LRGGYIGDITPLGGGATGGIARAIYVGSLSVPQGWAEAAP 335
>gi|212596761|gb|ACJ35604.1| PPE43 [Mycobacterium intracellulare ATCC 13950]
Length=409
Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 225/433 (52%), Positives = 274/433 (64%), Gaps = 38/433 (8%)
Query 1 MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGAWSGPS 60
MDFG++PPE+NSGRMY+GPG GPMLAAA AW+ LA +LHA AA Y S +S LT W GPS
Sbjct 1 MDFGVMPPEVNSGRMYSGPGAGPMLAAAAAWEALAAQLHAAAASYESVISNLTAGWRGPS 60
Query 61 STSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVLI 120
S+ MA+AAAPY AWMSATA AE +QAR A+ AYEAAF ATVPPPVIAANRAQLM LI
Sbjct 61 SSMMAAAAAPYAAWMSATAAQAEQTASQARAAVVAYEAAFLATVPPPVIAANRAQLMALI 120
Query 121 ATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTAFTEPPQTTNHGQLGA 180
ATN GQNTPAIM TEAQY EMWAQDAAAMYGYAG+SA A+++T F PP++TN
Sbjct 121 ATNFLGQNTPAIMATEAQYAEMWAQDAAAMYGYAGASAAAAQVTPFAPPPRSTNPAGTAG 180
Query 181 QSSAVAQTAATAAGGNLQSAFPQLLSAVPRALQGLALPTASQSASATPQWVTDLGNLSTF 240
Q++AVAQ + N +SA PQL+S+VP++LQ L P A+ D +L +
Sbjct 181 QAAAVAQATGGSVATNTESALPQLMSSVPQSLQTLTTPAAA----------ADPPSLLSA 230
Query 241 LGGAVTGPYTFPGVLPPSGVPYLLGIQSVLVTQNGQGVS----------ALLGKIGGKPI 290
A+TGP + G PYLLG+++ LV QN V+ + LG++GG+
Sbjct 231 FDSALTGPLGPVSLFGIGGSPYLLGVENYLVPQNVANVNSARQRLDRDRSALGRLGGEVN 290
Query 291 TGALAPLAEFALHTPILGSEGLGGGSVSAGIGRAGLVGKLSVPQGWTVAAPEIPSPAAAL 350
+G T ++ S G +S GIGRAG+VG+LSVP GW AAPEI S A +
Sbjct 291 SG-----------TQMVSSPRAAGTGMSPGIGRAGVVGRLSVPPGWAAAAPEIRSVATVI 339
Query 351 QATRLAAAPIA-ATDGAGALLGGMALSGLAGRAAAGSTGHPIGSAAAPAVGAAAAAVEDL 409
T A AP A A +G G+L MA SGL GRA A + G GSA A +GA
Sbjct 340 PQTAFAGAPSALAAEGEGSLFSSMAASGLVGRAMAATGG---GSARASGIGAGFGRA--- 393
Query 410 ATEANIFVIPAMD 422
AT A I VI A D
Sbjct 394 ATTATIIVINADD 406
>gi|254550816|ref|ZP_05141263.1| PPE family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
gi|297634368|ref|ZP_06952148.1| PPE family protein [Mycobacterium tuberculosis KZN 4207]
gi|297731355|ref|ZP_06960473.1| PPE family protein [Mycobacterium tuberculosis KZN R506]
gi|313658689|ref|ZP_07815569.1| PPE family protein [Mycobacterium tuberculosis KZN V2475]
Length=395
Score = 260 bits (665), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 216/407 (54%), Positives = 260/407 (64%), Gaps = 14/407 (3%)
Query 15 MYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGA-WSGPSSTSMASAAAPYVA 73
MY GPG GP+LAAA AWD LA EL++ AA Y S + LT A W GPSS +MA+A APYVA
Sbjct 1 MYAGPGSGPLLAAAAAWDALAAELYSAAASYGSTIEGLTVAPWMGPSSITMAAAVAPYVA 60
Query 74 WMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVLIATNIFGQNTPAIM 133
W+S TA AE AGAQA++A YE AFAATVPPPVI ANRA LM L+ATNIFGQNTPAI
Sbjct 61 WISVTAGQAEQAGAQAKIAAGVYETAFAATVPPPVIEANRALLMSLVATNIFGQNTPAIA 120
Query 134 MTEAQYMEMWAQDAAAMYGYAGSSATASRMTAFTEPPQTTNHGQLGAQSSAVAQTAATAA 193
TEA Y EMWAQDAAAMYGYAGSSATAS++ F+EPPQTTN AQS+ VAQ A AA
Sbjct 121 ATEAHYAEMWAQDAAAMYGYAGSSATASQLAPFSEPPQTTNPSATAAQSAVVAQAAGAAA 180
Query 194 GGNLQSAFPQLLSAVPRALQGLALPTASQSASATPQWVTDLGNLSTFLGGAVTGPYTFPG 253
++ + QL+S +P LQ LA T + + SA+ W T L +++T L +TGPY+ G
Sbjct 181 SSDITAQLSQLISLLPSTLQSLA--TTATATSASAGWDTVLQSITTILAN-LTGPYSIIG 237
Query 254 VLPPSGVPYLLGIQSVLVTQNGQGVSALLGKIGGKPITGALAPLAEFALHTPILGSEGLG 313
+ G +L Q + + QN GV+ALLG K GAL+PLA L +G
Sbjct 238 LGAIPGGWWLTFGQILGLAQNAPGVAALLGP---KAAAGALSPLAP--LRGGYIGDITPL 292
Query 314 GGSVSAGIGRAGLVGKLSVPQGWTVAAPEIPSPAAALQATRLAAAPIAATDGAGALLGGM 373
GG + GI RA VG LSVPQGW AAP + + A+ L T A A A + GAL G M
Sbjct 293 GGGATGGIARAIYVGSLSVPQGWAEAAPVMRAVASVLPGTGAAPA--LAAEAPGALFGEM 350
Query 374 ALSGLAGRAAAGSTGHPIGSAAAPAVGAAAAAVEDLATEANIFVIPA 420
ALS LAGRA AG+ + S A A A + ED+A+ I VIPA
Sbjct 351 ALSSLAGRALAGTA---VRSGAGAARVAGGSVTEDVASTTTIIVIPA 394
>gi|15841278|ref|NP_336315.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
gi|13881506|gb|AAK46129.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
Length=386
Score = 252 bits (644), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 198/383 (52%), Positives = 241/383 (63%), Gaps = 14/383 (3%)
Query 39 HATAAGYASELSALTGA-WSGPSSTSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYE 97
++ AA Y S + LT A W GPSS +MA+A APYVAW+S TA AE AGAQA++A YE
Sbjct 16 YSAAASYGSTIEGLTVAPWMGPSSITMAAAVAPYVAWISVTAGQAEQAGAQAKIAAGVYE 75
Query 98 AAFAATVPPPVIAANRAQLMVLIATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSS 157
AFAATVPPPVI ANRA LM L+ATNIFGQNTPAI TEA Y EMWAQDAAAMYGYAGSS
Sbjct 76 TAFAATVPPPVIEANRALLMSLVATNIFGQNTPAIAATEAHYAEMWAQDAAAMYGYAGSS 135
Query 158 ATASRMTAFTEPPQTTNHGQLGAQSSAVAQTAATAAGGNLQSAFPQLLSAVPRALQGLAL 217
ATAS++ F+EPPQTTN AQS+ VAQ A AA ++ + QL+S +P LQ LA
Sbjct 136 ATASQLAPFSEPPQTTNPSATAAQSAVVAQAAGAAASSDITAQLSQLISLLPSTLQSLA- 194
Query 218 PTASQSASATPQWVTDLGNLSTFLGGAVTGPYTFPGVLPPSGVPYLLGIQSVLVTQNGQG 277
T + + SA+ W T L +++T L +TGPY+ G+ G +L Q + + QN G
Sbjct 195 -TTATATSASAGWDTVLQSITTILAN-LTGPYSIIGLGAIPGGWWLTFGQILGLAQNAPG 252
Query 278 VSALLGKIGGKPITGALAPLAEFALHTPILGSEGLGGGSVSAGIGRAGLVGKLSVPQGWT 337
V+ALLG K GAL+PLA L +G GG + GI RA VG LSVPQGW
Sbjct 253 VAALLGP---KAAAGALSPLAP--LRGGYIGDITPLGGGATGGIARAIYVGSLSVPQGWA 307
Query 338 VAAPEIPSPAAALQATRLAAAPIAATDGAGALLGGMALSGLAGRAAAGSTGHPIGSAAAP 397
AAP + + A+ L T A A A + GAL G MALS LAGRA AG+ + S A
Sbjct 308 EAAPVMRAVASVLPGTGAAPA--LAAEAPGALFGEMALSSLAGRALAGTA---VRSGAGA 362
Query 398 AVGAAAAAVEDLATEANIFVIPA 420
A A + ED+A+ I VIPA
Sbjct 363 ARVAGGSVTEDVASTTTIIVIPA 385
>gi|296164791|ref|ZP_06847351.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295899845|gb|EFG79291.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=420
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 223/425 (53%), Positives = 265/425 (63%), Gaps = 8/425 (1%)
Query 1 MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSAL-TGAWSGP 59
+DFG LPPEINSGRMY G G GP+LAAA AWD LA EL T A Y S + L TG W+GP
Sbjct 2 LDFGALPPEINSGRMYVGAGSGPLLAAAAAWDELAAELQVTGASYNSIIETLATGPWTGP 61
Query 60 SSTSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVL 119
S+ +MA+AAAPYVAW++AT AE AGAQA++A AYEAAFAATVPPPVIAANRA L L
Sbjct 62 SAIAMAAAAAPYVAWINATGAQAEAAGAQAKVAAGAYEAAFAATVPPPVIAANRALLATL 121
Query 120 IATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTAFTEPPQTTNHGQLG 179
IATNI GQNTPAI TEAQYMEMWAQDAAAMYGYA SSATAS++T F EPPQTTN
Sbjct 122 IATNILGQNTPAIAATEAQYMEMWAQDAAAMYGYAASSATASQLTPFAEPPQTTNTDSTV 181
Query 180 AQSSAVAQTAATAAGGNLQSAFPQLLSAVPRALQGLALPTASQSASATPQWVTDLGNLST 239
Q+SA+ Q+ A A+ N S QL + + A+Q L T + + S + N +T
Sbjct 182 MQASAMTQSTAQAS-SNTVSHLSQLSATMQPAMQTLNAGTNAGTTSTGLTVPPIVQNWNT 240
Query 240 FLGGAVTGPYTFPGVLPPSGVPYLLGIQSVLVTQNGQGVSALLGKIGGKPITGALAPLAE 299
F AVTG Y+ G P+L Q+ QNGQ +A L G K ITGALAPL
Sbjct 241 FW-SAVTGVYSPQSWSTIPGGPFLSFGQAYAWGQNGQSAAAYLS--GPKAITGALAPLTS 297
Query 300 FALHTPILGSEGLGGGSVSAGIGRAGLVGKLSVPQGWTVAAPEIPSPAAALQATRLAAAP 359
A + S + GG VS +G+A LVG +SVPQGWT AAP + + A + A AA
Sbjct 298 GASAVKPMLSSAV-GGQVSGSLGKAALVGNMSVPQGWTEAAPAVRTIAQVIPANLAAAP- 355
Query 360 IAATDGAGALLGGMALSGLAGRAAAGSTGHPIGSAAAPAVGAAAAAV-EDLATEANIFVI 418
A G + M LS L GRA A S H +G+ AA A G+ V E A I VI
Sbjct 356 AATLAGEEGMFSQMGLSSLLGRAVASSATHSVGATAAKAAGSLGGVVAEADPAAATIIVI 415
Query 419 PAMDD 423
PA++D
Sbjct 416 PALED 420
>gi|183982688|ref|YP_001850979.1| PPE family protein, PPE31_1 [Mycobacterium marinum M]
gi|183176014|gb|ACC41124.1| PPE family protein, PPE31_1 [Mycobacterium marinum M]
Length=422
Score = 246 bits (627), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 174/360 (49%), Positives = 216/360 (60%), Gaps = 23/360 (6%)
Query 1 MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTG-AWSGP 59
MDF LPPEINS RMY+GPG PMLAA TAWDGLA EL +TAA Y + ++ LTG W GP
Sbjct 1 MDFAALPPEINSIRMYSGPGSAPMLAAVTAWDGLAAELRSTAAAYETVIAVLTGDGWLGP 60
Query 60 SSTSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVL 119
+S SM +A PY+AWM+ T + AE QA A A+EAAFA TVPP +AANR QL L
Sbjct 61 ASESMEAAVFPYLAWMNITGMQAEQTARQAAAAAGAFEAAFAMTVPPAQVAANRTQLQTL 120
Query 120 IATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTAFTEPPQTTNHGQLG 179
+ATN+ GQNTPAI TEA Y EMWAQDAAAMYGYA SA AS +T FT+P QTT+ L
Sbjct 121 VATNLLGQNTPAIAATEAAYGEMWAQDAAAMYGYAVGSAAASTLTQFTQPAQTTDPSGLA 180
Query 180 AQSSAVAQTAATAAGGNLQSAFPQLLSAVPRALQGLALPTASQSASATP--QWVTDLGNL 237
+QS+AV Q + G Q+ PQL+SAVP +LQGLA P A+ A P + L N
Sbjct 181 SQSAAVTQAVGSTVGNLTQTELPQLMSAVPASLQGLASPAAASPIDAIPGSGLLAALLNF 240
Query 238 --------------STFLGGAVTGPYTFPGVLPPSGVPYLLGIQSV-LVTQNGQGVSALL 282
S+ + G V+ Y P V+ P+ + I +V L Q V +
Sbjct 241 LDGNDGNPYGVFLNSSLVNGFVSAGYVSPAVVGPAIWAAMADINAVALGAQESAAVPPMG 300
Query 283 GKIGGKPITGALAPLAEFALHTPILGSE---GLGGGSVSAGIGRAGLVGKLSVPQGWTVA 339
G A +P + +L P+LG E LG G +SAG+ +A LVG++SVPQ W VA
Sbjct 301 SGEGNPSWIPAASPASPESL--PVLGEETAATLGTGGISAGMNQAELVGRMSVPQSWGVA 358
>gi|118618459|ref|YP_906791.1| PPE family protein [Mycobacterium ulcerans Agy99]
gi|118570569|gb|ABL05320.1| PPE family protein [Mycobacterium ulcerans Agy99]
Length=450
Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 171/357 (48%), Positives = 213/357 (60%), Gaps = 23/357 (6%)
Query 1 MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTG-AWSGP 59
MDF LPPEIN RMY+GPG PMLAA TAWDGLA EL +TAA Y + ++ LTG W GP
Sbjct 1 MDFAALPPEINPIRMYSGPGSAPMLAAVTAWDGLAAELRSTAAAYETVIAVLTGDGWLGP 60
Query 60 SSTSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVL 119
+S SM +A PY+AWM+ T + AE QA A A+EAAFA TVPP +AANR QL L
Sbjct 61 ASESMEAAVFPYLAWMNITGMQAEQTARQAAAAAGAFEAAFAMTVPPAQVAANRTQLQTL 120
Query 120 IATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTAFTEPPQTTNHGQLG 179
+ATN+ GQNTPAI TEA Y EMWAQDAAAMYGYA SA AS +T FT+P QTT+ L
Sbjct 121 VATNLLGQNTPAIAATEAAYGEMWAQDAAAMYGYAVGSAAASTLTQFTQPAQTTDPSGLA 180
Query 180 AQSSAVAQTAATAAGGNLQSAFPQLLSAVPRALQGLALPTASQSASATP--QWVTDLGNL 237
+QS+AV Q + G Q+ PQL+SAVP +LQGLA P A+ A P + L N
Sbjct 181 SQSAAVTQAVGSTVGNLTQTELPQLMSAVPASLQGLASPAAASPIDAIPGSGLLAALLNF 240
Query 238 --------------STFLGGAVTGPYTFPGVLPPSGVPYLLGIQSV-LVTQNGQGVSALL 282
S+ + G V+ Y P V+ P+ + I +V L Q V +
Sbjct 241 LDGNDGNPYGVFLNSSLVNGFVSAGYVSPAVVGPAIWAAMADINAVALGAQESAAVPPMG 300
Query 283 GKIGGKPITGALAPLAEFALHTPILGSE---GLGGGSVSAGIGRAGLVGKLSVPQGW 336
G A +P + +L P+LG E LG G +SAG+ +A LVG++SVPQ W
Sbjct 301 SGEGNPSWIPAASPASPESL--PVLGEETAATLGTGGISAGMNQAELVGRMSVPQSW 355
>gi|342859619|ref|ZP_08716272.1| PPE family protein [Mycobacterium colombiense CECT 3035]
gi|342132751|gb|EGT85971.1| PPE family protein [Mycobacterium colombiense CECT 3035]
Length=458
Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 184/405 (46%), Positives = 232/405 (58%), Gaps = 37/405 (9%)
Query 1 MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALT-GAWSGP 59
MDF +LPPE+NS RMY GPG GPMLAAA AWD +A L TA Y +E++ALT G W GP
Sbjct 1 MDFAVLPPEVNSARMYAGPGSGPMLAAAMAWDEVAAALQTTANSYQAEITALTSGPWVGP 60
Query 60 SSTSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVL 119
SS +M +A PY+ WM AE QAR A AYE AFA TVPPPV+ ANR QL L
Sbjct 61 SSAAMVAAITPYLEWMRTAGAQAEETANQARTAAFAYETAFAETVPPPVVTANRTQLAAL 120
Query 120 IATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTAFTEPPQTTNHGQLG 179
+ATN+ GQNTPAI TEA+Y EMWA+D AAM+GYAG++A+A+R+T F++P T+N G
Sbjct 121 VATNVLGQNTPAIAATEAEYGEMWARDTAAMFGYAGTTASATRLTPFSQPDPTSNSG--A 178
Query 180 AQSSAVAQTAATAAGGNLQSAFPQLLSAVPRALQGLALPTASQSASATPQWVTD-LGNLS 238
QS AVAQ A A G+ ++ Q SAVP L AL A+ +P TD LG S
Sbjct 179 GQSEAVAQ--AGTAAGSTRNTVQQSFSAVPNLLSNAAL----SPAAISPTSATDLLGLES 232
Query 239 TFLGGAVTGPYTFPGV----------LPPSGVPYLLGIQSVLVTQNGQGVSALLGKIGGK 288
+ + P + G+ LP L G + + GV A
Sbjct 233 DLIAIFLDAPASVAGLGIDAPGTLVALPFDVAGALTGFHTDDIVSGWAGVQAW------- 285
Query 289 PITGALAPLAEFALHTPILGSEGLGGGSV-SAGIGRAGLVGKLSVPQGWTVAAPEIPSPA 347
P TGA+ P + F P++ + G G++ SAG+G+A VG LSVP GWT AAP I A
Sbjct 286 PGTGAVPP-SPF----PVITNPAGGFGTLASAGLGQASTVGGLSVPPGWTAAAPAIRPAA 340
Query 348 AAL----QATRLAAAPIAATDGAGALLGGMALSGLAGRAAAGSTG 388
L AA AA+ G G+L G MA + +AGRA AG+ G
Sbjct 341 LVLPATTAGAAAPAAAAAASTGTGSLFGEMATASMAGRAMAGTGG 385
>gi|289574372|ref|ZP_06454599.1| PPE family protein [Mycobacterium tuberculosis K85]
gi|289538803|gb|EFD43381.1| PPE family protein [Mycobacterium tuberculosis K85]
Length=384
Score = 240 bits (613), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 181/380 (48%), Positives = 226/380 (60%), Gaps = 29/380 (7%)
Query 1 MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSAL-TGAWSGP 59
MDFG LPPE+NSGRMY GPG PM+AAA+AW+GLA EL A GY ++ L T W GP
Sbjct 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60
Query 60 SSTSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVL 119
+ST M A APYVAWM ATA+ AE A +QAR A AAYE AFAA VPPP+IAANRA+L L
Sbjct 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120
Query 120 IATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTAFTEPPQTTNHGQLG 179
+ N+FGQNT +I TEAQY EMWAQDA AMYGYAGSSATA+++T F PP TT+
Sbjct 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180
Query 180 AQSSAVAQTAATAAGGNLQSAFPQLLSAVPRALQGLALPTASQ-SASATPQWVTDLGNLS 238
Q SAVA+ A T+AG QSA +L++ +P L GL P +S +A+ATP W L
Sbjct 181 TQLSAVAKAAGTSAGA-AQSAIAELIAHLPNTLLGLTSPLSSALTAAATPGW------LE 233
Query 239 TFLGGAVTGPYTFPGVLPPSGVPYL-LGIQSVLVTQNGQGVSALLGKIGGKPITGALAPL 297
F+ + F + G+PY +GI + L+T +G G + A P
Sbjct 234 WFINWYLPISQLFYNTV---GLPYFAIGIGNSLITS--WRALGWIGSRGRRSCRAARRPS 288
Query 298 AEFALHTPILGSEGLGGGSVSAGIGRAGLVGKLSVPQGWTVAAPEIPSPAAALQATRLAA 357
A G G VSAG+G A +GKLSVP W A+P + +P + L +
Sbjct 289 ARVC-----------GTGPVSAGLGNAATIGKLSVPPNWAGASPSL-APTVGSASAPLVS 336
Query 358 APIAATD--GAGALLGGMAL 375
+ + AG LLGGM L
Sbjct 337 DIVEQPEAGAAGNLLGGMPL 356
>gi|118466613|ref|YP_881225.1| PPE family protein [Mycobacterium avium 104]
gi|118167900|gb|ABK68797.1| ppe family protein [Mycobacterium avium 104]
Length=446
Score = 236 bits (602), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 192/418 (46%), Positives = 241/418 (58%), Gaps = 39/418 (9%)
Query 1 MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGA-WSGP 59
M F +LPPE+NSGRMY+GPG G MLAAA+AWD LA ELH TAA S +S LT W GP
Sbjct 1 MHFAVLPPEVNSGRMYSGPGSGSMLAAASAWDELANELHVTAANIESVISGLTSEPWQGP 60
Query 60 SSTSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVL 119
S+ ++ +AAA V W++ATA A GAQ + A AYE+A+A TVPP V+AANR++L L
Sbjct 61 SAAAVTAAAATQVEWLTATAEQAAQTGAQLKAAATAYESAYAMTVPPSVVAANRSRLASL 120
Query 120 IATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTAFTEPPQTTNHGQLG 179
+ATN+ GQNTPAI TE Y EMWAQD AAMYGYAG++ ASR+T FT P +TTN +G
Sbjct 121 VATNLLGQNTPAIAATEVAYGEMWAQDVAAMYGYAGAAQAASRVTPFTPPQRTTNEAGMG 180
Query 180 AQSSAVAQTAATAAGGNLQSAF--PQLLSAVPRALQGLALPTASQSASATPQWVTDLGNL 237
AQ+++VAQ A T+A G++QSA +SAVP ALQ LA ++S SA++ L +
Sbjct 181 AQNASVAQAAGTSA-GHVQSAVSNSNAMSAVPNALQNLASSSSSSSAAS------GLSDF 233
Query 238 STFLGGAVTGPYTFPGVLPPSGVPYLLGIQSVLVTQNGQGVSALLGKIG---------GK 288
S+FL PY L+ + S NG G+ + G G +
Sbjct 234 SSFL-----NPYN------------LVSLGSAFFG-NGTGLIGVSGAAGFISDAEHKMTE 275
Query 289 PITGALAPLAEFALHTPILGSEGLGGGSVSAGIGRAGLVGKLSVPQGWTVAAPEIPSPAA 348
P + A A L P GS G +VSAG+GRA +G +SVPQGW+ AAPE+ A
Sbjct 276 PSAKSKAVAAPERLEPPA-GSRSSGATTVSAGMGRASSLGGMSVPQGWSTAAPELRLTAL 334
Query 349 ALQATRLAAAPIAATDGAGALLGGMALSGLAGRAAAGS-TGHPIGSAAAPAVGAAAAA 405
A A G L GG L GL GR AA S G G A G AAA
Sbjct 335 QAPAAAAAPPGRPGPFGEMPLFGGAPLMGLPGRGAADSRDGRSSGDAGTAGRGRRAAA 392
>gi|240169037|ref|ZP_04747696.1| PPE family protein [Mycobacterium kansasii ATCC 12478]
Length=391
Score = 236 bits (602), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 179/398 (45%), Positives = 223/398 (57%), Gaps = 54/398 (13%)
Query 1 MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASEL-SALTGAWSGP 59
MDFG LPPEINS RMYTGPG G +LAAA WDG+A++L+ A+ S + L G W G
Sbjct 1 MDFGALPPEINSARMYTGPGSGSLLAAAQVWDGVAIDLYNAASAVQSVIWGLLVGPWRGT 60
Query 60 SSTSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVL 119
S+ M +AA+PYV W+ TA AEL Q R A AYEAAFA TVPP VIA NR QL+ L
Sbjct 61 SAGLMVAAASPYVTWLGTTAAQAELTADQVRTAATAYEAAFATTVPPAVIAGNRIQLLTL 120
Query 120 IATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASR-MTAFTEPPQTTNHGQL 178
IA+N+FGQNTPAI +TEA Y EMWAQDAAAMYGYAGS+A A+ +T F E P+ TN G L
Sbjct 121 IASNLFGQNTPAIAVTEADYGEMWAQDAAAMYGYAGSAAVAAETLTPFDESPEITNAGGL 180
Query 179 GAQSSAVAQTAATAAGGNLQSAFPQLLSAVPRALQGLALPTASQSASATPQWVTDLGNLS 238
Q+ AV + TAA QL+S VP+ALQ LA P
Sbjct 181 VQQAGAVEEATDTAAAN-------QLISTVPQALQQLAEP-------------------- 213
Query 239 TFLGGAVTGPYTFPGVLPPSGVPYLLGIQSVLVTQNGQGVSALLGKIG----GKPITGAL 294
G T P+T G L + P+L I +++ N VS L + + +
Sbjct 214 ----GQGTTPFTAVGELWKAISPHLSPISNIVSMLNNH-VSMLSSGMSMTNTASSLLKGM 268
Query 295 APLAEFALHTPI-------------LGSEGLGGGSVSAGIGRAGLVGKLSVPQGWTVAAP 341
AP A A+ + + LG+ G+GG V+AG+GRA +G LSVP GW AA
Sbjct 269 APAAAQAVESAVESGARAMGSLGSGLGTSGIGGSGVAAGLGRALSIGSLSVPHGW-AAAN 327
Query 342 EIPSPAAALQATRLAAAPIAATDGAGALLGGMALSGLA 379
+ PAA +A LA AA G +LGG+ L LA
Sbjct 328 QTVVPAA--RALPLAGVATAAETGPAPMLGGLPLGQLA 363
>gi|333991947|ref|YP_004524561.1| PPE family protein [Mycobacterium sp. JDM601]
gi|333487915|gb|AEF37307.1| PPE family protein [Mycobacterium sp. JDM601]
Length=463
Score = 232 bits (591), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 173/405 (43%), Positives = 223/405 (56%), Gaps = 26/405 (6%)
Query 1 MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGA-WSGP 59
MDFGL+PPEI S MY GPGPGP+ A A AWDGLA EL A +A YAS ++ LT W G
Sbjct 1 MDFGLVPPEIQSALMYAGPGPGPISATAAAWDGLAAELDAASASYASLVTDLTSTGWLGS 60
Query 60 SSTSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVL 119
++ MA+A +PY+AWM TAV AQ R +AAYE AFAATVPPPVIA NRA+L+ L
Sbjct 61 TAALMAAAVSPYLAWMHTTAVQCAETAAQVRAGVAAYEEAFAATVPPPVIATNRAELLTL 120
Query 120 IATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTAFTEPPQTTNHGQLG 179
+ATNIFGQNT AI +A+Y EMWAQDAAAM+GYA +++TA+++T FT PP+T N
Sbjct 121 LATNIFGQNTAAIAANQAEYAEMWAQDAAAMFGYASAASTATQLTPFTAPPKTANSDGSD 180
Query 180 AQSSAVAQTAATAAGGNLQSAFPQLLSAVPRALQ----------------GLALPTASQS 223
++A AQ A +A Q+A L+ VP+ LQ G A
Sbjct 181 NTTAAAAQAAGSATATQTQNA----LAGVPQTLQQLALPMAAPAAADPVVGQATAAGVSG 236
Query 224 ASATPQWVTDLGNLSTFLGGAVTGPYTFPGVLPPSGVPYLLGIQSV-LVTQNGQGVSALL 282
SA+ + T +G+ + F +F PS + + + LVT G S +
Sbjct 237 ISASSAYHTIIGSANFFQRIYSQFQSSFAASNEPSTTDIMERLNRIGLVT--GAVDSDEV 294
Query 283 GKIGGKPITGALAPLAEFALHTPILGSEGLGGGSVSA--GIGRAGLVGKLSVPQGWTVAA 340
G+ G L H +G +SA +G +GLVG LSVP W A
Sbjct 295 GRAADGGPLGTLGLGGFGDWHNWARFFKGFPLLKLSAAGSMGESGLVGGLSVPPTWAEAL 354
Query 341 PEIPSPAAALQATRLAAAPIAATDGAGALLGGMALSGLAGRAAAG 385
P++ AA T + AAP AA G G L AL+G+AGRA AG
Sbjct 355 PDVRLAAAETTGTGVNAAPSAAGGGFGMLGAQAALTGMAGRALAG 399
>gi|118466467|ref|YP_882538.1| PPE family protein [Mycobacterium avium 104]
gi|118167754|gb|ABK68651.1| ppe family protein [Mycobacterium avium 104]
gi|212596108|gb|ACJ35552.1| PPE29 [Mycobacterium avium subsp. avium]
Length=417
Score = 232 bits (591), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 213/423 (51%), Positives = 262/423 (62%), Gaps = 14/423 (3%)
Query 1 MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGAWSGPS 60
MDFG LPPEINSGR+Y+GPG P+LAAA AW GLA E+H+ AA Y S ++ L W GPS
Sbjct 1 MDFGSLPPEINSGRIYSGPGSAPLLAAAAAWHGLAAEMHSAAASYGSAIAELRTLWHGPS 60
Query 61 STSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVLI 120
ST+MA+AAAP++AW+ TAV AE AQA A AAY++ FAATVPPPVIAANRA L LI
Sbjct 61 STAMAAAAAPFIAWLDGTAVQAEQTAAQATAAAAAYDSVFAATVPPPVIAANRALLASLI 120
Query 121 ATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTAFTEPPQTTNHGQLGA 180
ATN+ GQNTPAI TEA Y EMWAQDAAAMY YAG+SA A+R+T F PPQT +
Sbjct 121 ATNVLGQNTPAIAATEAHYAEMWAQDAAAMYAYAGASAVATRLTPFGAPPQTADANAAAD 180
Query 181 QSSAVAQTAATAAGGNLQSAFPQLLSAVPRALQGLALPTASQSASATPQWVTDL-GNLST 239
QS+A A ++ +++SA Q +S VP A Q A TA +A+ P +TD+ G L T
Sbjct 181 QSAAAASALQSSTASSVESALSQAVSQVPVAAQVNA--TAVTAAAQLPLSLTDITGILKT 238
Query 240 F--LGGAVTGPYTFPGVLPPSGVPYLLGIQSVLVTQNGQGVSALLGKIGGKPITGALAPL 297
F + G ++GPYT GV + Y + + V QG+ LL K +TG LAPL
Sbjct 239 FNSVMGTISGPYTPLGVANLAKNWYQIALSIPSVGTGIQGIGPLLHP---KALTGVLAPL 295
Query 298 AEFALHTPILGSEGLGG-GSVSAGIGRAGLVGKLSVPQGWTVAAPEIPSPAAALQATRLA 356
L T GS L G+VSA GRAGLVG LSVP W A P + + AA L T L
Sbjct 296 LRSDLLT---GSTALSSAGTVSASAGRAGLVGALSVPANWASAVPAVRTVAAELPETMLD 352
Query 357 AAPIAATDGAGALLGGMALSGLAGRAAAGSTGHPIGSAAAPAVGAAAAAVEDLATEANIF 416
AAP A +G + G ALS LAGRA G+ + + G A AV+DLAT + +
Sbjct 353 AAPAMAVNGQQGMFGPTALSSLAGRAVGGTATRAVAGSTVRVPG--AVAVDDLATTSTVI 410
Query 417 VIP 419
VIP
Sbjct 411 VIP 413
>gi|333990650|ref|YP_004523264.1| PPE family protein [Mycobacterium sp. JDM601]
gi|333486619|gb|AEF36011.1| PPE family protein [Mycobacterium sp. JDM601]
Length=386
Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 142/242 (59%), Positives = 174/242 (72%), Gaps = 9/242 (3%)
Query 1 MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALT-GAWSGP 59
MDFG LPPEINS R+Y G GPG +LAAATAW LA EL++ AA Y S ++ LT G+W+GP
Sbjct 1 MDFGALPPEINSARIYAGAGPGSLLAAATAWQELATELNSAAASYGSVIAGLTTGSWAGP 60
Query 60 SSTSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVL 119
SS +MA+AA PY+ W++AT A+ A AQ A+AAYE AFAATVPPP+I ANR+ L
Sbjct 61 SSVAMAAAAGPYITWLNATGAQAQQAAAQVSAAVAAYETAFAATVPPPLITANRSLQATL 120
Query 120 IATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTAFTEPPQTTN-HGQL 178
ATNI GQNT AI TEA Y+EMWAQD AAMYGYAG+SA A+R++ FT PPQTT+ GQ+
Sbjct 121 TATNILGQNTAAIATTEADYLEMWAQDTAAMYGYAGASALATRVSPFTSPPQTTDPSGQI 180
Query 179 GAQSSAVAQTAATAAGGN---LQSAFPQLLSAVPRALQGLALP---TASQSASATPQWVT 232
QS +VAQ+AA G + L S PQL+SA P ALQGLA P T S ++SA+ +T
Sbjct 181 -TQSYSVAQSAAATTGTDTEALMSQGPQLISATPTALQGLAAPATETPSNASSASLSGLT 239
Query 233 DL 234
L
Sbjct 240 SL 241
>gi|296170357|ref|ZP_06851948.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295895080|gb|EFG74799.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=459
Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 180/366 (50%), Positives = 221/366 (61%), Gaps = 30/366 (8%)
Query 1 MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGAWSGPS 60
MD+G+LPPEINS RMY GPG G ML AA AWD LA EL + AA Y++ +S LT AW GPS
Sbjct 1 MDYGVLPPEINSARMYAGPGSGSMLTAAAAWDELATELRSIAASYSAVISGLTTAWLGPS 60
Query 61 STSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVLI 120
ST MA+AAAPY AW++ATA AE +G+QAR A AAYEAAFAATVPPPVI NRA+L LI
Sbjct 61 STRMAAAAAPYAAWLNATAAQAEQSGSQARAAAAAYEAAFAATVPPPVIETNRAELESLI 120
Query 121 ATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTAFTEPPQTTNHGQLGA 180
ATN FGQNT AI EA+Y MWAQDAAAMYGYAG SA A+ +T F P Q TN
Sbjct 121 ATNTFGQNTAAIAANEARYARMWAQDAAAMYGYAGQSAAAAAVTPFDPPAQNTNPAGTAG 180
Query 181 QSSAVAQTAATAAGGNLQSAFPQLLSAVPRALQGLALPTASQ---SASATPQWVTDLGNL 237
Q++AV+Q T+AG N Q+A L SA P AL+ LA P A ++S + +
Sbjct 181 QTAAVSQVVGTSAGTNSQAALSHLTSATPSALRSLAAPAAVNPPSASSLASFLSSLNSSP 240
Query 238 STFLGGAVTGPYTFPGVLPPSGVPYLLGIQSVLVTQNGQGVSALLGKIGGKPITGALAPL 297
L G V ++P + +P N +S ++G + G G L
Sbjct 241 LAKLAGNVE-------LIPKAVLP-----------ANDVLISTIMGLVIGARHLGDLTVA 282
Query 298 AEFALHTPILGSEGLG------GGSVSAGIGRAGLVGKLSVPQGWTVAAPEIPSPAAALQ 351
+ A TP L + GLG G +VSA +G+AGLVG L+VP W VA P I + AA L
Sbjct 283 VKAA--TPGLAA-GLGYAAPALGSTVSATVGQAGLVGGLAVPPSWAVATPAIRTVAAVLS 339
Query 352 ATRLAA 357
T +A
Sbjct 340 GTSESA 345
>gi|307079711|ref|ZP_07488881.1| PPE family protein [Mycobacterium tuberculosis SUMu011]
gi|308362459|gb|EFP51310.1| PPE family protein [Mycobacterium tuberculosis SUMu011]
Length=376
Score = 229 bits (584), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 186/383 (49%), Positives = 232/383 (61%), Gaps = 30/383 (7%)
Query 1 MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSAL-TGAWSGP 59
MDFG LPPE+NSGRMY GPG PM+AAA+AW+GLA EL A GY ++ L T W GP
Sbjct 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60
Query 60 SSTSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVL 119
+ST M A APYVAWM ATA+ AE A +QAR A AAYE AFAA VPPP+IAANRA+L L
Sbjct 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120
Query 120 IATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTAFTEPPQTTNHGQLG 179
+ N+FGQNT +I TEAQY EMWAQDA AMYGYAGSSATA+++T F PP TT+
Sbjct 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180
Query 180 AQSSAVAQTAATAAGGNLQSAFPQLLSAVPRALQGLALPTASQ-SASATPQWVTDLGNLS 238
Q SAVA+ A T+AG QSA +L++ +P L GL P +S +A+ATP W L
Sbjct 181 TQLSAVAKAAGTSAGA-AQSAIAELIAHLPNTLLGLTSPLSSALTAAATPGW------LE 233
Query 239 TFLGGAVTGPYTFPGVLPPSGVPYL-LGIQSVLVTQNGQGVSALLGKIGGKPITGALAPL 297
F+ + F + G+PY +GI + L+T LG IG + A A
Sbjct 234 WFINWYLPISQLFYNTV---GLPYFAIGIGNSLITS-----WRALGWIGPEAAEAAAAAP 285
Query 298 AEFALHTPILGSEGLGGGSVSAGIGRAGLVGKLSVPQGWTVAAPEI-PS--PAAALQATR 354
A + G G VSAG+G A +GKLS+P W A+P + P+ A+A +
Sbjct 286 AAVG-------AAVGGTGPVSAGLGNAATIGKLSLPPNWAGASPSLAPTVGSASAPLVSD 338
Query 355 LAAAPIAATDGAGALLGGMALSG 377
+ P A AG LLGGM L+G
Sbjct 339 IVEQPEA--GAAGNLLGGMPLAG 359
>gi|336458159|gb|EGO37142.1| PPE-repeat containing protein [Mycobacterium avium subsp. paratuberculosis
S397]
Length=445
Score = 229 bits (584), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 190/419 (46%), Positives = 240/419 (58%), Gaps = 42/419 (10%)
Query 1 MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGA-WSGP 59
M F +LPPE+NSGRMY+GPG G MLAA +AWD LA ELH TAA S +S LT W GP
Sbjct 1 MHFAVLPPEVNSGRMYSGPGSGSMLAA-SAWDELANELHVTAANIESVISGLTSEPWQGP 59
Query 60 SSTSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVL 119
S+ ++ +AAA V W++ATA A GAQ + A AYE+A+A TVPP V+AANR++L L
Sbjct 60 SAAAVTAAAATQVEWLTATAEQAAQTGAQLKAAATAYESAYAMTVPPSVVAANRSRLASL 119
Query 120 IATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTAFTEPPQTTNHGQLG 179
+ATN+ GQNTPAI TE Y EMWAQD AAMYGYAG++ ASR+T FT P +TTN +G
Sbjct 120 VATNLLGQNTPAIAATEVAYGEMWAQDVAAMYGYAGAAQAASRVTPFTPPQRTTNEAGMG 179
Query 180 AQSSAVAQTAATAAGGNLQSAF--PQLLSAVPRALQGLALPTASQSASATPQWVTDLGNL 237
AQ+++VAQ A T+A G++QSA +SAVP ALQ LA ++S SA++ L +
Sbjct 180 AQNASVAQAAGTSA-GHVQSAVSNSNAMSAVPNALQNLASSSSSSSAAS------GLSDF 232
Query 238 STFLGGAVTGPYTFPGVLPPSGVPYLLGIQSVLVTQNGQGVSALLGKIGGKPITGALAPL 297
S+FL PY L+ + S NG G+ + G G I+ A +
Sbjct 233 SSFL-----NPYN------------LVSLGSAFFG-NGTGLIGVSGAAGF--ISDAEHKM 272
Query 298 AEFALHT----------PILGSEGLGGGSVSAGIGRAGLVGKLSVPQGWTVAAPEIPSPA 347
E + P GS G +VSAG+GRA +G +SVPQGW+ AAPE+ A
Sbjct 273 TEPGAKSKAVAAPERLEPPAGSRSSGATTVSAGMGRASSLGGMSVPQGWSTAAPELRLTA 332
Query 348 AALQATRLAAAPIAATDGAGALLGGMALSGLAGRAAAGS-TGHPIGSAAAPAVGAAAAA 405
A A G L GG L GL GR AA S G G A G AAA
Sbjct 333 LQAPAAAAAPPGRPGPFGEMPLFGGAPLMGLPGRGAADSRDGRSSGDAGTAGRGRRAAA 391
>gi|340626711|ref|YP_004745163.1| PPE family protein [Mycobacterium canettii CIPT 140010059]
gi|340004901|emb|CCC44047.1| PPE family protein [Mycobacterium canettii CIPT 140010059]
Length=385
Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 186/381 (49%), Positives = 230/381 (61%), Gaps = 30/381 (7%)
Query 1 MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSAL-TGAWSGP 59
MDFG LPPE+NSGRMY GPG PM+AAA+AW+GLA EL A GY ++ L T W GP
Sbjct 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60
Query 60 SSTSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVL 119
+ST M A APYVAWM ATA+ AE A +QAR A AAYE AFAA VPPP+IAANRA+L L
Sbjct 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120
Query 120 IATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTAFTEPPQTTNHGQLG 179
+ N+FGQNT +I TEAQY EMWAQDA AMYGYAGSSATA+++T F PP TT+
Sbjct 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180
Query 180 AQSSAVAQTAATAAGGNLQSAFPQLLSAVPRALQGLALPTASQ-SASATPQWVTDLGNLS 238
Q SAVA+ A T+AG QSA +L++ +P L GL P +S +A+ATP W L
Sbjct 181 TQLSAVAKAAGTSAGAA-QSAIAELIAHLPNTLLGLTSPLSSALTAAATPGW------LE 233
Query 239 TFLGGAVTGPYTFPGVLPPSGVPYL-LGIQSVLVTQNGQGVSALLGKIGGKPITGALAPL 297
F+ + F + G+PY +GI + L+T LG IG + A A
Sbjct 234 WFINWYLPISQLFYNTV---GLPYFAIGIGNSLITSWRA-----LGWIGPEAAEAAAAAP 285
Query 298 AEFALHTPILGSEGLGGGSVSAGIGRAGLVGKLSVPQGWTVAAPEI-PS--PAAALQATR 354
A + G G VSAG+G A +GKLSVP W A+P + P+ A+A +
Sbjct 286 AAVG-------AAVGGTGPVSAGLGNAATIGKLSVPPNWAGASPSLAPTVGSASAPLVSD 338
Query 355 LAAAPIAATDGAGALLGGMAL 375
+ P A AG LLGGM L
Sbjct 339 IVEQPEA--GAAGNLLGGMPL 357
>gi|31792891|ref|NP_855384.1| PPE family protein [Mycobacterium bovis AF2122/97]
gi|224990087|ref|YP_002644774.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|289443162|ref|ZP_06432906.1| PPE family protein [Mycobacterium tuberculosis T46]
18 more sequence titles
Length=385
Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 183/380 (49%), Positives = 228/380 (60%), Gaps = 28/380 (7%)
Query 1 MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSAL-TGAWSGP 59
MDFG LPPE+NSGRMY GPG PM+AAA+AW+GLA EL A GY ++ L T W GP
Sbjct 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60
Query 60 SSTSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVL 119
+ST M A APYVAWM ATA+ AE A +QAR A AAYE AFAA VPPP+IAANRA+L L
Sbjct 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120
Query 120 IATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTAFTEPPQTTNHGQLG 179
+ N+FGQNT +I TEAQY EMWAQDA AMYGYAGSSATA+++T F PP TT+
Sbjct 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180
Query 180 AQSSAVAQTAATAAGGNLQSAFPQLLSAVPRALQGLALPTASQ-SASATPQWVTDLGNLS 238
Q SAVA+ A T+AG QSA +L++ +P L GL P +S +A+ATP W L
Sbjct 181 TQLSAVAKAAGTSAGAA-QSAIAELIAHLPNTLLGLTSPLSSALTAAATPGW------LE 233
Query 239 TFLGGAVTGPYTFPGVLPPSGVPYL-LGIQSVLVTQNGQGVSALLGKIGGKPITGALAPL 297
F+ + F + G+PY +GI + L+T LG IG + A A
Sbjct 234 WFINWYLPISQLFYNTV---GLPYFAIGIGNSLITSWRA-----LGWIGPEAAEAAAAAP 285
Query 298 AEFALHTPILGSEGLGGGSVSAGIGRAGLVGKLSVPQGWTVAAPEIPSPAAALQATRLAA 357
A + G G VSAG+G A +GKLSVP W A+P + +P + L +
Sbjct 286 AAVG-------AAVGGTGPVSAGLGNAATIGKLSVPPNWAGASPSL-APTVGSASAPLVS 337
Query 358 APIAATD--GAGALLGGMAL 375
+ + AG LLGGM L
Sbjct 338 DIVEQPEAGAAGNLLGGMPL 357
>gi|15841163|ref|NP_336200.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
gi|13881383|gb|AAK46014.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
gi|323719795|gb|EGB28909.1| PPE family protein [Mycobacterium tuberculosis CDC1551A]
Length=385
Score = 227 bits (579), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 182/380 (48%), Positives = 228/380 (60%), Gaps = 28/380 (7%)
Query 1 MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSAL-TGAWSGP 59
MDFG LPPE+NSGRMY GPG PM+AAA+AW+GLA EL A GY ++ L T W GP
Sbjct 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60
Query 60 SSTSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVL 119
+ST M A APYVAWM ATA+ AE A +QAR A AAYE AFAA VPPP+IAANRA+L L
Sbjct 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120
Query 120 IATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTAFTEPPQTTNHGQLG 179
+ N+FGQNT +I TEAQY EMWAQDA AMYGYAGSSATA+++T F PP TT+
Sbjct 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180
Query 180 AQSSAVAQTAATAAGGNLQSAFPQLLSAVPRALQGLALPTASQ-SASATPQWVTDLGNLS 238
Q SAVA+ A T+AG QSA +L++ +P L GL P +S +A+ATP W L
Sbjct 181 TQLSAVAKAAGTSAGAA-QSAIAELIAHLPNTLLGLTSPLSSALTAAATPGW------LE 233
Query 239 TFLGGAVTGPYTFPGVLPPSGVPYL-LGIQSVLVTQNGQGVSALLGKIGGKPITGALAPL 297
F+ + F + G+PY +GI + L+T LG IG + A A
Sbjct 234 WFINWYLPISQLFYNTV---GLPYFAIGIGNSLITSWRA-----LGWIGPEAAEAAAAAP 285
Query 298 AEFALHTPILGSEGLGGGSVSAGIGRAGLVGKLSVPQGWTVAAPEIPSPAAALQATRLAA 357
A + G G VSAG+G A +GKLS+P W A+P + +P + L +
Sbjct 286 AAVG-------AAVGGTGPVSAGLGNAATIGKLSLPPNWAGASPSL-APTVGSASAPLVS 337
Query 358 APIAATD--GAGALLGGMAL 375
+ + AG LLGGM L
Sbjct 338 DIVEQPEAGAAGNLLGGMPL 357
>gi|57116898|ref|YP_177827.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
gi|148661502|ref|YP_001283025.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
gi|148822911|ref|YP_001287665.1| PPE family protein [Mycobacterium tuberculosis F11]
39 more sequence titles
Length=385
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 182/380 (48%), Positives = 228/380 (60%), Gaps = 28/380 (7%)
Query 1 MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSAL-TGAWSGP 59
MDFG LPPE+NSGRMY GPG PM+AAA+AW+GLA EL A GY ++ L T W GP
Sbjct 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60
Query 60 SSTSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVL 119
+ST M A APYVAWM ATA+ AE A +QAR A AAYE AFAA VPPP+IAANRA+L L
Sbjct 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120
Query 120 IATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTAFTEPPQTTNHGQLG 179
+ N+FGQNT +I TEAQY EMWAQDA AMYGYAGSSATA+++T F PP TT+
Sbjct 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180
Query 180 AQSSAVAQTAATAAGGNLQSAFPQLLSAVPRALQGLALPTASQ-SASATPQWVTDLGNLS 238
Q SAVA+ A T+AG QSA +L++ +P L GL P +S +A+ATP W L
Sbjct 181 TQLSAVAKAAGTSAGAA-QSAIAELIAHLPNTLLGLTSPLSSALTAAATPGW------LE 233
Query 239 TFLGGAVTGPYTFPGVLPPSGVPYL-LGIQSVLVTQNGQGVSALLGKIGGKPITGALAPL 297
F+ + F + G+PY +GI + L+T LG IG + A A
Sbjct 234 WFINWYLPISQLFYNTV---GLPYFAIGIGNSLITSWRA-----LGWIGPEAAEAAAAAP 285
Query 298 AEFALHTPILGSEGLGGGSVSAGIGRAGLVGKLSVPQGWTVAAPEIPSPAAALQATRLAA 357
A + G G VSAG+G A +GKLS+P W A+P + +P + L +
Sbjct 286 AAVG-------AAVGGTGPVSAGLGNAATIGKLSLPPNWAGASPSL-APTVGSASAPLVS 337
Query 358 APIAATD--GAGALLGGMAL 375
+ + AG LLGGM L
Sbjct 338 DIVEQPEAGAAGNLLGGMPL 357
>gi|167969175|ref|ZP_02551452.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
Length=356
Score = 227 bits (578), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 172/346 (50%), Positives = 213/346 (62%), Gaps = 25/346 (7%)
Query 1 MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSAL-TGAWSGP 59
MDFG LPPE+NSGRMY GPG PM+AAA+AW+GLA EL A GY ++ L T W GP
Sbjct 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60
Query 60 SSTSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVL 119
+ST M A APYVAWM ATA+ AE A +QAR A AAYE AFAA VPPP+IAANRA+L L
Sbjct 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120
Query 120 IATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTAFTEPPQTTNHGQLG 179
+ N+FGQNT +I TEAQY EMWAQDA AMYGYAGSSATA+++T F PP TT+
Sbjct 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180
Query 180 AQSSAVAQTAATAAGGNLQSAFPQLLSAVPRALQGLALPTASQ-SASATPQWVTDLGNLS 238
Q SAVA+ A T+AG QSA +L++ +P L GL P +S +A+ATP W L
Sbjct 181 TQLSAVAKAAGTSAGA-AQSAIAELIAHLPNTLLGLTSPLSSALTAAATPGW------LE 233
Query 239 TFLGGAVTGPYTFPGVLPPSGVPYL-LGIQSVLVTQNGQGVSALLGKIGGKPITGALAPL 297
F+ + F + G+PY +GI + L+T LG IG + A A
Sbjct 234 WFINWYLPISQLFYNTV---GLPYFAIGIGNSLITSWRA-----LGWIGPEAAEAAAAAP 285
Query 298 AEFALHTPILGSEGLGGGSVSAGIGRAGLVGKLSVPQGWTVAAPEI 343
A + G G VSAG+G A +GKLS+P W A+P +
Sbjct 286 AAVG-------AAVGGTGPVSAGLGNAATIGKLSLPPNWAGASPSL 324
>gi|57116922|ref|YP_177845.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
gi|148661615|ref|YP_001283138.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
gi|167967396|ref|ZP_02549673.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
11 more sequence titles
Length=468
Score = 227 bits (578), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 191/404 (48%), Positives = 225/404 (56%), Gaps = 56/404 (13%)
Query 1 MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSAL-TGAWSGP 59
MDFGL PPEI SG MY GPG GPMLAAA AWDGLA EL + AA YAS + + + +W GP
Sbjct 1 MDFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGP 60
Query 60 SSTSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVL 119
SS MA+AAAPYV WMS T+ A+ A QAR A+ AYE AFAA VPPP IAANR+QL+ L
Sbjct 61 SSAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISL 120
Query 120 IATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTAFTEPPQTTNHGQLG 179
+ATNIFGQNT AI TEA+Y EMWAQD AM+GYA SSATASR+T FT PPQTTN L
Sbjct 121 VATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATASRLTPFTAPPQTTNPSGLA 180
Query 180 AQSSAVAQTAATAAGGN-----LQSAFPQL-LSAVPRALQGLALPTASQSASATPQWVTD 233
Q++A Q A A+G N L SA Q +P LQGL A+ + Q+
Sbjct 181 GQAAATGQATALASGTNAVTTALSSAAAQFPFDIIPTLLQGL--------ATLSTQYTQL 232
Query 234 LGNLSTFLGGAVTGPYTFPGVLPPSGVPYLLGIQSVLVT-QNGQGVSALLGKIGGKPITG 292
+G L + G TG T+ Q+V VT N S P G
Sbjct 233 MGQLINAIFGP-TGATTY---------------QNVFVTAANVTKFSTWANDAMSAPNLG 276
Query 293 ALAPLAEFALH-----TPILGSEGLGGG-------------SVSAGIGRAGLVGKLSVPQ 334
+ EF + P + LG G + SAG+G+A LVG LSVP
Sbjct 277 ----MTEFKVFWQPPPAPEIPKSSLGAGLGLRSGLSAGLAHAASAGLGQANLVGDLSVPP 332
Query 335 GWTVAAPEIPSPAAALQATRLAAAPIAATDGAGALLGGMALSGL 378
W A P + A L AT LAAAP AT LLG MAL +
Sbjct 333 SWASATPAVRLVANTLPATSLAAAP--ATQIPANLLGQMALGSM 374
>gi|289745858|ref|ZP_06505236.1| PPE family protein [Mycobacterium tuberculosis 02_1987]
gi|289686386|gb|EFD53874.1| PPE family protein [Mycobacterium tuberculosis 02_1987]
Length=385
Score = 226 bits (577), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 182/380 (48%), Positives = 228/380 (60%), Gaps = 28/380 (7%)
Query 1 MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSAL-TGAWSGP 59
MDFG LPPE+NSGRMY GPG PM+AAA+AW+GLA EL A GY ++ L T W GP
Sbjct 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60
Query 60 SSTSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVL 119
+ST M A APYVAWM ATA+ AE A +QAR A AAYE AFAA VPPP+IAANRA+L L
Sbjct 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120
Query 120 IATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTAFTEPPQTTNHGQLG 179
+ N+FGQNT +I TEAQY EMWAQDA AM+GYAGSSATA+++T F PP TT+
Sbjct 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMHGYAGSSATATKVTPFAPPPNTTSPSAAA 180
Query 180 AQSSAVAQTAATAAGGNLQSAFPQLLSAVPRALQGLALPTASQ-SASATPQWVTDLGNLS 238
Q SAVA+ A T+AG QSA +L++ +P L GL P +S +A+ATP W L
Sbjct 181 TQLSAVAKAAGTSAGA-AQSAIAELIAHLPNTLLGLTSPLSSALTAAATPGW------LE 233
Query 239 TFLGGAVTGPYTFPGVLPPSGVPYL-LGIQSVLVTQNGQGVSALLGKIGGKPITGALAPL 297
F+ + F + G+PY +GI + L+T LG IG + A A
Sbjct 234 WFINWYLPISQLFYNTV---GLPYFAIGIGNSLITSWRA-----LGWIGPEAAEAAAAAP 285
Query 298 AEFALHTPILGSEGLGGGSVSAGIGRAGLVGKLSVPQGWTVAAPEIPSPAAALQATRLAA 357
A + G G VSAG+G A +GKLSVP W A+P + +P + L +
Sbjct 286 AAVG-------AAVGGTGPVSAGLGNAATIGKLSVPPNWAGASPSL-APTVGSASAPLVS 337
Query 358 APIAATD--GAGALLGGMAL 375
+ + AG LLGGM L
Sbjct 338 DIVEQPEAGAAGNLLGGMPL 357
>gi|296167733|ref|ZP_06849950.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295897076|gb|EFG76691.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=406
Score = 226 bits (575), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 164/380 (44%), Positives = 208/380 (55%), Gaps = 19/380 (5%)
Query 1 MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGA-WSGP 59
+DFG PPE NS RMYTGPGP + AAA+AW+GLA EL++TA GY ++AL+G W GP
Sbjct 2 IDFGAAPPEYNSARMYTGPGPEALTAAASAWNGLAAELNSTALGYDKVITALSGEEWLGP 61
Query 60 SSTSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVL 119
+S SMA A APYVAWM TA AE Q A AYE A AATVPPP++AANRAQ L
Sbjct 62 ASASMAQAVAPYVAWMRTTAAQAEQTANQMHAAATAYETALAATVPPPLVAANRAQTAQL 121
Query 120 IATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTAFTEPPQTTNHGQLG 179
+ATN+ G NTPAI EAQY EMWAQDA+ MY YAG SA A+++ FT PQ N
Sbjct 122 LATNVLGLNTPAIAQLEAQYGEMWAQDASTMYSYAGQSAAATKVAPFTAAPQIANPSAQA 181
Query 180 AQSSAVAQTAATAAGGNLQSAFPQLLSAVPRALQGLALPTASQSASATPQW------VTD 233
Q +AVA +A + QS +S+ P LQ LA P A+QS++ + + +T
Sbjct 182 TQGTAVANATGNSAASSTQSVLSHAVSSTPNTLQALAAPAATQSSTTSAPFSEIWYLLTG 241
Query 234 LGNLSTFLGGAVTGPYTFPGV-LPPSGVPYLLGIQSVLVTQNGQGVSALLGKIGG-KPIT 291
L T LG V G F + G+PY SV + G ++ G + G P
Sbjct 242 QTTLPTSLGSFVNGYNPFSALWYNTEGLPYF----SVGMGNFGVQIAKTTGLLNGAAPAV 297
Query 292 GALAPLAEFALHTPILGSEGLGGGSVSAGIGRAGLV-GKLSVPQGWTVAAPEIPSPAAAL 350
AL L G +A +G A V G+LSVP W+ A+ P A+
Sbjct 298 KAL----PGLGGLGGLLGGGATAAHPAAALGNAASVGGRLSVPVSWSAASTPAPVLGQAI 353
Query 351 QATRLAAAPIAATDGAGALL 370
+ ++AAP AT G LL
Sbjct 354 PVSTVSAAP-DATAAPGNLL 372
>gi|336457980|gb|EGO36967.1| PPE-repeat containing protein [Mycobacterium avium subsp. paratuberculosis
S397]
Length=417
Score = 226 bits (575), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 211/423 (50%), Positives = 261/423 (62%), Gaps = 14/423 (3%)
Query 1 MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGAWSGPS 60
MDFG LPPEINSGR+Y+GPG P+LAAA AW GLA E+H+ AA Y S ++ L W GPS
Sbjct 1 MDFGSLPPEINSGRIYSGPGSAPLLAAAAAWHGLAAEMHSAAASYGSAIAELRTLWHGPS 60
Query 61 STSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVLI 120
ST+MA+AAAP++AW+ TA AE AQA A AAY++ FAATVPPPVIAANRA L LI
Sbjct 61 STAMAAAAAPFIAWLGGTAAQAEQTAAQATAAAAAYDSVFAATVPPPVIAANRALLASLI 120
Query 121 ATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTAFTEPPQTTNHGQLGA 180
ATN+ GQNTPAI TEA Y EMWAQDAAAMY YAG+SA A+R+T F PPQ+ +
Sbjct 121 ATNVLGQNTPAIAATEAHYAEMWAQDAAAMYAYAGASAVATRLTLFGAPPQSADANAAAD 180
Query 181 QSSAVAQTAATAAGGNLQSAFPQLLSAVPRALQGLALPTASQSASATPQWVTDL-GNLST 239
QS+A A ++ +++SA Q +S VP A Q A TA +A+ P +TD+ G L T
Sbjct 181 QSAAAASALQSSTASSVESALSQGVSQVPVAAQVNA--TAVTAAAQLPLSLTDITGILKT 238
Query 240 F--LGGAVTGPYTFPGVLPPSGVPYLLGIQSVLVTQNGQGVSALLGKIGGKPITGALAPL 297
F + G ++GPYT GV + Y + + V QG+ LL K +TG LAPL
Sbjct 239 FNSVMGTISGPYTPLGVANLAKNWYQIALSIPSVGTGIQGIGPLLHP---KALTGVLAPL 295
Query 298 AEFALHTPILGSEGLGG-GSVSAGIGRAGLVGKLSVPQGWTVAAPEIPSPAAALQATRLA 356
L T GS L G+VSA GRAGLVG LSVP W A P + + AA L T L
Sbjct 296 LRSDLLT---GSTALSSAGTVSASAGRAGLVGSLSVPANWASAVPAVRTVAAELPETMLD 352
Query 357 AAPIAATDGAGALLGGMALSGLAGRAAAGSTGHPIGSAAAPAVGAAAAAVEDLATEANIF 416
AAP A +G + G ALS LAGRA G+ + + G A AV+DLAT + +
Sbjct 353 AAPAMAVNGQQGMFGPTALSSLAGRAVGGTATRAVAGSTVRVPG--AVAVDDLATTSTVI 410
Query 417 VIP 419
VIP
Sbjct 411 VIP 413
Lambda K H
0.314 0.127 0.370
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 859091811192
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40