BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1802 Length=463 Score E Sequences producing significant alignments: (Bits) Value gi|31792990|ref|NP_855483.1| PPE family protein [Mycobacterium b... 907 0.0 gi|340626812|ref|YP_004745264.1| PPE family protein [Mycobacteri... 904 0.0 gi|15841272|ref|NP_336309.1| PPE family protein [Mycobacterium t... 904 0.0 gi|339294739|gb|AEJ46850.1| PPE family protein [Mycobacterium tu... 903 0.0 gi|289443274|ref|ZP_06433018.1| PPE family protein [Mycobacteriu... 842 0.0 gi|254231986|ref|ZP_04925313.1| PPE family protein [Mycobacteriu... 747 0.0 gi|289750373|ref|ZP_06509751.1| PPE family protein [Mycobacteriu... 711 0.0 gi|289761952|ref|ZP_06521330.1| PPE family protein [Mycobacteriu... 643 0.0 gi|289574480|ref|ZP_06454707.1| PPE family protein [Mycobacteriu... 597 1e-168 gi|240171260|ref|ZP_04749919.1| PPE family protein [Mycobacteriu... 369 5e-100 gi|296170357|ref|ZP_06851948.1| PPE family protein [Mycobacteriu... 362 5e-98 gi|289443283|ref|ZP_06433027.1| PPE family protein [Mycobacteriu... 347 2e-93 gi|148823022|ref|YP_001287776.1| PPE family protein [Mycobacteri... 347 2e-93 gi|289447423|ref|ZP_06437167.1| PPE family protein [Mycobacteriu... 347 2e-93 gi|254231991|ref|ZP_04925318.1| PPE family protein [Mycobacteriu... 347 2e-93 gi|289574486|ref|ZP_06454713.1| PPE family protein [Mycobacteriu... 346 4e-93 gi|57116922|ref|YP_177845.1| PPE family protein [Mycobacterium t... 346 4e-93 gi|340626818|ref|YP_004745270.1| PPE family protein [Mycobacteri... 346 5e-93 gi|15841279|ref|NP_336316.1| PPE family protein [Mycobacterium t... 345 1e-92 gi|183982692|ref|YP_001850983.1| PPE family protein, PPE30 [Myco... 332 6e-89 gi|183981477|ref|YP_001849768.1| PPE family protein [Mycobacteri... 324 2e-86 gi|118618456|ref|YP_906788.1| PPE family protein [Mycobacterium ... 318 9e-85 gi|289574479|ref|ZP_06454706.1| PPE family protein [Mycobacteriu... 306 5e-81 gi|41407620|ref|NP_960456.1| hypothetical protein MAP1522 [Mycob... 304 2e-80 gi|212595990|gb|ACJ35542.1| PPE17 [Mycobacterium avium subsp. av... 302 8e-80 gi|296164792|ref|ZP_06847352.1| PPE family protein [Mycobacteriu... 300 4e-79 gi|254775385|ref|ZP_05216901.1| hypothetical protein MaviaA2_120... 294 2e-77 gi|118462708|ref|YP_882091.1| PPE family protein [Mycobacterium ... 294 3e-77 gi|212596776|gb|ACJ35605.1| PPE44 [Mycobacterium intracellulare ... 291 2e-76 gi|254823261|ref|ZP_05228262.1| hypothetical protein MintA_25249... 280 3e-73 gi|212596561|gb|ACJ35588.1| PPE19 [Mycobacterium intracellulare ... 280 3e-73 gi|289745759|ref|ZP_06505137.1| PPE family protein [Mycobacteriu... 278 2e-72 gi|212596535|gb|ACJ35586.1| PPE17 [Mycobacterium intracellulare ... 275 2e-71 gi|41407617|ref|NP_960453.1| hypothetical protein MAP1519 [Mycob... 271 2e-70 gi|118465656|ref|YP_882095.1| PPE family protein [Mycobacterium ... 271 2e-70 gi|254775380|ref|ZP_05216896.1| hypothetical protein MaviaA2_120... 255 1e-65 gi|254822973|ref|ZP_05227974.1| PPE family protein [Mycobacteriu... 251 1e-64 gi|183981478|ref|YP_001849769.1| PPE family protein [Mycobacteri... 248 1e-63 gi|240173095|ref|ZP_04751753.1| PPE family protein, PPE30 [Mycob... 247 3e-63 gi|15841271|ref|NP_336308.1| PPE family protein [Mycobacterium t... 244 2e-62 gi|339294738|gb|AEJ46849.1| PPE family protein [Mycobacterium tu... 244 2e-62 gi|339631855|ref|YP_004723497.1| PPE family protein [Mycobacteri... 243 4e-62 gi|289574478|ref|ZP_06454705.1| PPE family protein [Mycobacteriu... 243 7e-62 gi|118462279|ref|YP_882537.1| PPE family protein [Mycobacterium ... 242 1e-61 gi|254823257|ref|ZP_05228258.1| hypothetical protein MintA_25229... 242 1e-61 gi|289447416|ref|ZP_06437160.1| PPE family protein [Mycobacteriu... 242 1e-61 gi|240171262|ref|ZP_04749921.1| PPE family protein [Mycobacteriu... 239 8e-61 gi|340626811|ref|YP_004745263.1| PPE family protein [Mycobacteri... 237 3e-60 gi|289761951|ref|ZP_06521329.1| PPE family protein [Mycobacteriu... 231 2e-58 gi|342861291|ref|ZP_08717939.1| hypothetical protein MCOL_20506 ... 228 2e-57 >gi|31792990|ref|NP_855483.1| PPE family protein [Mycobacterium bovis AF2122/97] gi|57116917|ref|YP_177841.1| PPE family protein [Mycobacterium tuberculosis H37Rv] gi|121637703|ref|YP_977926.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] 62 more sequence titles Length=463 Score = 907 bits (2343), Expect = 0.0, Method: Compositional matrix adjust. Identities = 463/463 (100%), Positives = 463/463 (100%), Gaps = 0/463 (0%) Query 1 MDFGVLPPEINSGRMYAGPGSGPMLAAAAAWDGLATELQSTAADYGSVISVLTGVWSGQS 60 MDFGVLPPEINSGRMYAGPGSGPMLAAAAAWDGLATELQSTAADYGSVISVLTGVWSGQS Sbjct 1 MDFGVLPPEINSGRMYAGPGSGPMLAAAAAWDGLATELQSTAADYGSVISVLTGVWSGQS 60 Query 61 SGTMAAAAAPYVAWMSATAALAREAAAQASAAAAAYEAAFAATVPPPVVAANRAELAVLA 120 SGTMAAAAAPYVAWMSATAALAREAAAQASAAAAAYEAAFAATVPPPVVAANRAELAVLA Sbjct 61 SGTMAAAAAPYVAWMSATAALAREAAAQASAAAAAYEAAFAATVPPPVVAANRAELAVLA 120 Query 121 ATNIFGQNTGAIAAAEARYAEMWAQDAAAMYGYAGSSSVATQVTPFAAPPPTTNAAGLAT 180 ATNIFGQNTGAIAAAEARYAEMWAQDAAAMYGYAGSSSVATQVTPFAAPPPTTNAAGLAT Sbjct 121 ATNIFGQNTGAIAAAEARYAEMWAQDAAAMYGYAGSSSVATQVTPFAAPPPTTNAAGLAT 180 Query 181 QGVAVAQAVGASAGNARSLVSEVLEFLATAGTNYNKTVASLMNAVTGVPYASSVYNSMLG 240 QGVAVAQAVGASAGNARSLVSEVLEFLATAGTNYNKTVASLMNAVTGVPYASSVYNSMLG Sbjct 181 QGVAVAQAVGASAGNARSLVSEVLEFLATAGTNYNKTVASLMNAVTGVPYASSVYNSMLG 240 Query 241 LGFAESKMVLPANDTVISTIFGMVQFQKFFNPVTPFNPDLIPKSALGAGLGLRSAISSGL 300 LGFAESKMVLPANDTVISTIFGMVQFQKFFNPVTPFNPDLIPKSALGAGLGLRSAISSGL Sbjct 241 LGFAESKMVLPANDTVISTIFGMVQFQKFFNPVTPFNPDLIPKSALGAGLGLRSAISSGL 300 Query 301 GSTAPAISAGASQAGSVGGMSVPPSWAAATPAIRTVAAVFSSTGLQAVPAAAISEGSLLS 360 GSTAPAISAGASQAGSVGGMSVPPSWAAATPAIRTVAAVFSSTGLQAVPAAAISEGSLLS Sbjct 301 GSTAPAISAGASQAGSVGGMSVPPSWAAATPAIRTVAAVFSSTGLQAVPAAAISEGSLLS 360 Query 361 QMALASVAGGALGGAAARATGGFLGGGRVTAVKKSLKDSDSPDKLRRVVAHMMEKPESVQ 420 QMALASVAGGALGGAAARATGGFLGGGRVTAVKKSLKDSDSPDKLRRVVAHMMEKPESVQ Sbjct 361 QMALASVAGGALGGAAARATGGFLGGGRVTAVKKSLKDSDSPDKLRRVVAHMMEKPESVQ 420 Query 421 HWHTDEDGLDDLLAELKKKPGIHAVHMAGGNKAEIAPTISESG 463 HWHTDEDGLDDLLAELKKKPGIHAVHMAGGNKAEIAPTISESG Sbjct 421 HWHTDEDGLDDLLAELKKKPGIHAVHMAGGNKAEIAPTISESG 463 >gi|340626812|ref|YP_004745264.1| PPE family protein [Mycobacterium canettii CIPT 140010059] gi|340005002|emb|CCC44150.1| PPE family protein [Mycobacterium canettii CIPT 140010059] Length=463 Score = 904 bits (2337), Expect = 0.0, Method: Compositional matrix adjust. Identities = 462/463 (99%), Positives = 462/463 (99%), Gaps = 0/463 (0%) Query 1 MDFGVLPPEINSGRMYAGPGSGPMLAAAAAWDGLATELQSTAADYGSVISVLTGVWSGQS 60 MDFGVLPPEINSGRMYAGPGSGPMLAAAAAWDGLATELQSTAADYGSVISVLTGVWSGQS Sbjct 1 MDFGVLPPEINSGRMYAGPGSGPMLAAAAAWDGLATELQSTAADYGSVISVLTGVWSGQS 60 Query 61 SGTMAAAAAPYVAWMSATAALAREAAAQASAAAAAYEAAFAATVPPPVVAANRAELAVLA 120 SGTMAAAAAPYVAWMSATAALAREAAAQASAAAAAYEAAFAATVPPPVVAANRAELAVLA Sbjct 61 SGTMAAAAAPYVAWMSATAALAREAAAQASAAAAAYEAAFAATVPPPVVAANRAELAVLA 120 Query 121 ATNIFGQNTGAIAAAEARYAEMWAQDAAAMYGYAGSSSVATQVTPFAAPPPTTNAAGLAT 180 ATNIFGQNTGAIAAAEARYAEMWAQDAAAMYGYAGSSSVATQVTPFAAPPPTTNAAGLAT Sbjct 121 ATNIFGQNTGAIAAAEARYAEMWAQDAAAMYGYAGSSSVATQVTPFAAPPPTTNAAGLAT 180 Query 181 QGVAVAQAVGASAGNARSLVSEVLEFLATAGTNYNKTVASLMNAVTGVPYASSVYNSMLG 240 QGVAVAQAVGAS GNARSLVSEVLEFLATAGTNYNKTVASLMNAVTGVPYASSVYNSMLG Sbjct 181 QGVAVAQAVGASPGNARSLVSEVLEFLATAGTNYNKTVASLMNAVTGVPYASSVYNSMLG 240 Query 241 LGFAESKMVLPANDTVISTIFGMVQFQKFFNPVTPFNPDLIPKSALGAGLGLRSAISSGL 300 LGFAESKMVLPANDTVISTIFGMVQFQKFFNPVTPFNPDLIPKSALGAGLGLRSAISSGL Sbjct 241 LGFAESKMVLPANDTVISTIFGMVQFQKFFNPVTPFNPDLIPKSALGAGLGLRSAISSGL 300 Query 301 GSTAPAISAGASQAGSVGGMSVPPSWAAATPAIRTVAAVFSSTGLQAVPAAAISEGSLLS 360 GSTAPAISAGASQAGSVGGMSVPPSWAAATPAIRTVAAVFSSTGLQAVPAAAISEGSLLS Sbjct 301 GSTAPAISAGASQAGSVGGMSVPPSWAAATPAIRTVAAVFSSTGLQAVPAAAISEGSLLS 360 Query 361 QMALASVAGGALGGAAARATGGFLGGGRVTAVKKSLKDSDSPDKLRRVVAHMMEKPESVQ 420 QMALASVAGGALGGAAARATGGFLGGGRVTAVKKSLKDSDSPDKLRRVVAHMMEKPESVQ Sbjct 361 QMALASVAGGALGGAAARATGGFLGGGRVTAVKKSLKDSDSPDKLRRVVAHMMEKPESVQ 420 Query 421 HWHTDEDGLDDLLAELKKKPGIHAVHMAGGNKAEIAPTISESG 463 HWHTDEDGLDDLLAELKKKPGIHAVHMAGGNKAEIAPTISESG Sbjct 421 HWHTDEDGLDDLLAELKKKPGIHAVHMAGGNKAEIAPTISESG 463 >gi|15841272|ref|NP_336309.1| PPE family protein [Mycobacterium tuberculosis CDC1551] gi|13881500|gb|AAK46123.1| PPE family protein [Mycobacterium tuberculosis CDC1551] gi|323719680|gb|EGB28801.1| PPE family protein [Mycobacterium tuberculosis CDC1551A] Length=463 Score = 904 bits (2336), Expect = 0.0, Method: Compositional matrix adjust. Identities = 462/463 (99%), Positives = 462/463 (99%), Gaps = 0/463 (0%) Query 1 MDFGVLPPEINSGRMYAGPGSGPMLAAAAAWDGLATELQSTAADYGSVISVLTGVWSGQS 60 MDFGVLPPEINSGRMYAGPGSGPMLAAAAAWDGLATELQSTAADYGSVISVLTGVWSGQS Sbjct 1 MDFGVLPPEINSGRMYAGPGSGPMLAAAAAWDGLATELQSTAADYGSVISVLTGVWSGQS 60 Query 61 SGTMAAAAAPYVAWMSATAALAREAAAQASAAAAAYEAAFAATVPPPVVAANRAELAVLA 120 SGTMAAAAAPYVAWMSATAALAREAAAQASAAAAAYEAAFAATVPPPVVAANRAELAVLA Sbjct 61 SGTMAAAAAPYVAWMSATAALAREAAAQASAAAAAYEAAFAATVPPPVVAANRAELAVLA 120 Query 121 ATNIFGQNTGAIAAAEARYAEMWAQDAAAMYGYAGSSSVATQVTPFAAPPPTTNAAGLAT 180 ATNIFGQNTGAIAAAEARYAEMWAQDAAAMYGYAGSSSVATQVTPFAAPPPTTNAAGLAT Sbjct 121 ATNIFGQNTGAIAAAEARYAEMWAQDAAAMYGYAGSSSVATQVTPFAAPPPTTNAAGLAT 180 Query 181 QGVAVAQAVGASAGNARSLVSEVLEFLATAGTNYNKTVASLMNAVTGVPYASSVYNSMLG 240 QGVAVAQAVGASAGNARSLVSEVLEFLATAGTNYNKTVASLMNAVTGVPYASSVYNSMLG Sbjct 181 QGVAVAQAVGASAGNARSLVSEVLEFLATAGTNYNKTVASLMNAVTGVPYASSVYNSMLG 240 Query 241 LGFAESKMVLPANDTVISTIFGMVQFQKFFNPVTPFNPDLIPKSALGAGLGLRSAISSGL 300 LGFAESKMVLPANDTVISTIFGMVQFQKFFNPVTPFNPDLIPKSALGAGLGLRSAISSGL Sbjct 241 LGFAESKMVLPANDTVISTIFGMVQFQKFFNPVTPFNPDLIPKSALGAGLGLRSAISSGL 300 Query 301 GSTAPAISAGASQAGSVGGMSVPPSWAAATPAIRTVAAVFSSTGLQAVPAAAISEGSLLS 360 GSTAPAISAGASQAGSVGGMSVPPSWAAATPAIRTVAAVFSSTGLQAVPAAAISEGSLLS Sbjct 301 GSTAPAISAGASQAGSVGGMSVPPSWAAATPAIRTVAAVFSSTGLQAVPAAAISEGSLLS 360 Query 361 QMALASVAGGALGGAAARATGGFLGGGRVTAVKKSLKDSDSPDKLRRVVAHMMEKPESVQ 420 QMALASVAGGALGGAAARATGGFLGGGRVTAVKKSLKDSD PDKLRRVVAHMMEKPESVQ Sbjct 361 QMALASVAGGALGGAAARATGGFLGGGRVTAVKKSLKDSDLPDKLRRVVAHMMEKPESVQ 420 Query 421 HWHTDEDGLDDLLAELKKKPGIHAVHMAGGNKAEIAPTISESG 463 HWHTDEDGLDDLLAELKKKPGIHAVHMAGGNKAEIAPTISESG Sbjct 421 HWHTDEDGLDDLLAELKKKPGIHAVHMAGGNKAEIAPTISESG 463 >gi|339294739|gb|AEJ46850.1| PPE family protein [Mycobacterium tuberculosis CCDC5079] Length=463 Score = 903 bits (2333), Expect = 0.0, Method: Compositional matrix adjust. Identities = 461/463 (99%), Positives = 462/463 (99%), Gaps = 0/463 (0%) Query 1 MDFGVLPPEINSGRMYAGPGSGPMLAAAAAWDGLATELQSTAADYGSVISVLTGVWSGQS 60 MDFGVLPPEINSGRMYAGPGSGPMLAAAAAWDGLATELQSTAADYGSVISVLTGVWSGQS Sbjct 1 MDFGVLPPEINSGRMYAGPGSGPMLAAAAAWDGLATELQSTAADYGSVISVLTGVWSGQS 60 Query 61 SGTMAAAAAPYVAWMSATAALAREAAAQASAAAAAYEAAFAATVPPPVVAANRAELAVLA 120 SGTMAAAAAPYVAWMSATAALAREAAAQASAAAAAYEAAFAATVPPPVVAANRAELAVLA Sbjct 61 SGTMAAAAAPYVAWMSATAALAREAAAQASAAAAAYEAAFAATVPPPVVAANRAELAVLA 120 Query 121 ATNIFGQNTGAIAAAEARYAEMWAQDAAAMYGYAGSSSVATQVTPFAAPPPTTNAAGLAT 180 ATNIFGQNTGAIAAAEARYAEMWAQDAAAMYGYAGSSSVATQVTPFAAPPPTTNAAGLAT Sbjct 121 ATNIFGQNTGAIAAAEARYAEMWAQDAAAMYGYAGSSSVATQVTPFAAPPPTTNAAGLAT 180 Query 181 QGVAVAQAVGASAGNARSLVSEVLEFLATAGTNYNKTVASLMNAVTGVPYASSVYNSMLG 240 QGVAVAQAVGASAGNARSLVSEVLEFLAT+GTNYNKTVASLMNAVTGVPYASSVYNSMLG Sbjct 181 QGVAVAQAVGASAGNARSLVSEVLEFLATSGTNYNKTVASLMNAVTGVPYASSVYNSMLG 240 Query 241 LGFAESKMVLPANDTVISTIFGMVQFQKFFNPVTPFNPDLIPKSALGAGLGLRSAISSGL 300 LGFAESKMVLPANDTVISTIFGMVQFQKFFNPVTPFNPDLIPKSALGAGLGLRSAISSGL Sbjct 241 LGFAESKMVLPANDTVISTIFGMVQFQKFFNPVTPFNPDLIPKSALGAGLGLRSAISSGL 300 Query 301 GSTAPAISAGASQAGSVGGMSVPPSWAAATPAIRTVAAVFSSTGLQAVPAAAISEGSLLS 360 GSTAPAISAGASQAGSVGGMSVPPSWAAATPAIRTVAAVFSSTGLQAVPAAAISEGS LS Sbjct 301 GSTAPAISAGASQAGSVGGMSVPPSWAAATPAIRTVAAVFSSTGLQAVPAAAISEGSRLS 360 Query 361 QMALASVAGGALGGAAARATGGFLGGGRVTAVKKSLKDSDSPDKLRRVVAHMMEKPESVQ 420 QMALASVAGGALGGAAARATGGFLGGGRVTAVKKSLKDSDSPDKLRRVVAHMMEKPESVQ Sbjct 361 QMALASVAGGALGGAAARATGGFLGGGRVTAVKKSLKDSDSPDKLRRVVAHMMEKPESVQ 420 Query 421 HWHTDEDGLDDLLAELKKKPGIHAVHMAGGNKAEIAPTISESG 463 HWHTDEDGLDDLLAELKKKPGIHAVHMAGGNKAEIAPTISESG Sbjct 421 HWHTDEDGLDDLLAELKKKPGIHAVHMAGGNKAEIAPTISESG 463 >gi|289443274|ref|ZP_06433018.1| PPE family protein [Mycobacterium tuberculosis T46] gi|289416193|gb|EFD13433.1| PPE family protein [Mycobacterium tuberculosis T46] Length=431 Score = 842 bits (2175), Expect = 0.0, Method: Compositional matrix adjust. Identities = 431/431 (100%), Positives = 431/431 (100%), Gaps = 0/431 (0%) Query 1 MDFGVLPPEINSGRMYAGPGSGPMLAAAAAWDGLATELQSTAADYGSVISVLTGVWSGQS 60 MDFGVLPPEINSGRMYAGPGSGPMLAAAAAWDGLATELQSTAADYGSVISVLTGVWSGQS Sbjct 1 MDFGVLPPEINSGRMYAGPGSGPMLAAAAAWDGLATELQSTAADYGSVISVLTGVWSGQS 60 Query 61 SGTMAAAAAPYVAWMSATAALAREAAAQASAAAAAYEAAFAATVPPPVVAANRAELAVLA 120 SGTMAAAAAPYVAWMSATAALAREAAAQASAAAAAYEAAFAATVPPPVVAANRAELAVLA Sbjct 61 SGTMAAAAAPYVAWMSATAALAREAAAQASAAAAAYEAAFAATVPPPVVAANRAELAVLA 120 Query 121 ATNIFGQNTGAIAAAEARYAEMWAQDAAAMYGYAGSSSVATQVTPFAAPPPTTNAAGLAT 180 ATNIFGQNTGAIAAAEARYAEMWAQDAAAMYGYAGSSSVATQVTPFAAPPPTTNAAGLAT Sbjct 121 ATNIFGQNTGAIAAAEARYAEMWAQDAAAMYGYAGSSSVATQVTPFAAPPPTTNAAGLAT 180 Query 181 QGVAVAQAVGASAGNARSLVSEVLEFLATAGTNYNKTVASLMNAVTGVPYASSVYNSMLG 240 QGVAVAQAVGASAGNARSLVSEVLEFLATAGTNYNKTVASLMNAVTGVPYASSVYNSMLG Sbjct 181 QGVAVAQAVGASAGNARSLVSEVLEFLATAGTNYNKTVASLMNAVTGVPYASSVYNSMLG 240 Query 241 LGFAESKMVLPANDTVISTIFGMVQFQKFFNPVTPFNPDLIPKSALGAGLGLRSAISSGL 300 LGFAESKMVLPANDTVISTIFGMVQFQKFFNPVTPFNPDLIPKSALGAGLGLRSAISSGL Sbjct 241 LGFAESKMVLPANDTVISTIFGMVQFQKFFNPVTPFNPDLIPKSALGAGLGLRSAISSGL 300 Query 301 GSTAPAISAGASQAGSVGGMSVPPSWAAATPAIRTVAAVFSSTGLQAVPAAAISEGSLLS 360 GSTAPAISAGASQAGSVGGMSVPPSWAAATPAIRTVAAVFSSTGLQAVPAAAISEGSLLS Sbjct 301 GSTAPAISAGASQAGSVGGMSVPPSWAAATPAIRTVAAVFSSTGLQAVPAAAISEGSLLS 360 Query 361 QMALASVAGGALGGAAARATGGFLGGGRVTAVKKSLKDSDSPDKLRRVVAHMMEKPESVQ 420 QMALASVAGGALGGAAARATGGFLGGGRVTAVKKSLKDSDSPDKLRRVVAHMMEKPESVQ Sbjct 361 QMALASVAGGALGGAAARATGGFLGGGRVTAVKKSLKDSDSPDKLRRVVAHMMEKPESVQ 420 Query 421 HWHTDEDGLDD 431 HWHTDEDGLDD Sbjct 421 HWHTDEDGLDD 431 >gi|254231986|ref|ZP_04925313.1| PPE family protein [Mycobacterium tuberculosis C] gi|124601045|gb|EAY60055.1| PPE family protein [Mycobacterium tuberculosis C] Length=463 Score = 747 bits (1929), Expect = 0.0, Method: Compositional matrix adjust. Identities = 443/463 (96%), Positives = 443/463 (96%), Gaps = 0/463 (0%) Query 1 MDFGVLPPEINSGRMYAGPGSGPMLAAAAAWDGLATELQSTAADYGSVISVLTGVWSGQS 60 MDFGVLPPEINSGRMYAGPG G TAADYGSVISVLTGVWSGQS Sbjct 1 MDFGVLPPEINSGRMYAGPGRVRCWPRQRPGTGWPPNYSPTAADYGSVISVLTGVWSGQS 60 Query 61 SGTMAAAAAPYVAWMSATAALAREAAAQASAAAAAYEAAFAATVPPPVVAANRAELAVLA 120 S TMAAAAAPYVAWMSATAALAREAAAQASAAAAAYEAAFAATVPPPVVAANRAELAVLA Sbjct 61 SRTMAAAAAPYVAWMSATAALAREAAAQASAAAAAYEAAFAATVPPPVVAANRAELAVLA 120 Query 121 ATNIFGQNTGAIAAAEARYAEMWAQDAAAMYGYAGSSSVATQVTPFAAPPPTTNAAGLAT 180 ATNIFGQNTGAIAAAEARYAEMWAQDAAAMYGYAGSSSVATQVTPFAAPPPTTNAAGLAT Sbjct 121 ATNIFGQNTGAIAAAEARYAEMWAQDAAAMYGYAGSSSVATQVTPFAAPPPTTNAAGLAT 180 Query 181 QGVAVAQAVGASAGNARSLVSEVLEFLATAGTNYNKTVASLMNAVTGVPYASSVYNSMLG 240 QGVAVAQAVGASAGNARSLVSEVLEFLATAGTNYNKTVASLMNAVTGVPYASSVYNSMLG Sbjct 181 QGVAVAQAVGASAGNARSLVSEVLEFLATAGTNYNKTVASLMNAVTGVPYASSVYNSMLG 240 Query 241 LGFAESKMVLPANDTVISTIFGMVQFQKFFNPVTPFNPDLIPKSALGAGLGLRSAISSGL 300 LGFAESKMVLPANDTVISTIFGMVQFQKFFNPVTPFNPDLIPKSALGAGLGLRSAISSGL Sbjct 241 LGFAESKMVLPANDTVISTIFGMVQFQKFFNPVTPFNPDLIPKSALGAGLGLRSAISSGL 300 Query 301 GSTAPAISAGASQAGSVGGMSVPPSWAAATPAIRTVAAVFSSTGLQAVPAAAISEGSLLS 360 GSTAPAISAGASQAGSVGGMSVPPSWAAATPAIRTVAAVFSSTGLQAVPAAAISEGSLLS Sbjct 301 GSTAPAISAGASQAGSVGGMSVPPSWAAATPAIRTVAAVFSSTGLQAVPAAAISEGSLLS 360 Query 361 QMALASVAGGALGGAAARATGGFLGGGRVTAVKKSLKDSDSPDKLRRVVAHMMEKPESVQ 420 QMALASVAGGALGGAAARATGGFLGGGRVTAVKKSLKDSDSPDKLRRVVAHMMEKPESVQ Sbjct 361 QMALASVAGGALGGAAARATGGFLGGGRVTAVKKSLKDSDSPDKLRRVVAHMMEKPESVQ 420 Query 421 HWHTDEDGLDDLLAELKKKPGIHAVHMAGGNKAEIAPTISESG 463 HWHTDEDGLDDLLAELKKKPGIHAVHMAGGNKAEIAPTISESG Sbjct 421 HWHTDEDGLDDLLAELKKKPGIHAVHMAGGNKAEIAPTISESG 463 >gi|289750373|ref|ZP_06509751.1| PPE family protein [Mycobacterium tuberculosis T92] gi|289690960|gb|EFD58389.1| PPE family protein [Mycobacterium tuberculosis T92] Length=360 Score = 711 bits (1835), Expect = 0.0, Method: Compositional matrix adjust. Identities = 358/360 (99%), Positives = 359/360 (99%), Gaps = 0/360 (0%) Query 104 VPPPVVAANRAELAVLAATNIFGQNTGAIAAAEARYAEMWAQDAAAMYGYAGSSSVATQV 163 +PPPVVA NRAELAVLAATNIFGQNTGAIAAAEARYAEMWAQDAAAMYGYAGSSSVATQV Sbjct 1 MPPPVVATNRAELAVLAATNIFGQNTGAIAAAEARYAEMWAQDAAAMYGYAGSSSVATQV 60 Query 164 TPFAAPPPTTNAAGLATQGVAVAQAVGASAGNARSLVSEVLEFLATAGTNYNKTVASLMN 223 TPFAAPPPTTNAAGLATQGVAVAQAVGASAGNARSLVSEVLEFLATAGTNYNKTVASLMN Sbjct 61 TPFAAPPPTTNAAGLATQGVAVAQAVGASAGNARSLVSEVLEFLATAGTNYNKTVASLMN 120 Query 224 AVTGVPYASSVYNSMLGLGFAESKMVLPANDTVISTIFGMVQFQKFFNPVTPFNPDLIPK 283 AVTGVPYASSVYNSMLGLGFAESKMVLPANDTVISTIFGMVQFQKFFNPVTPFNPDLIPK Sbjct 121 AVTGVPYASSVYNSMLGLGFAESKMVLPANDTVISTIFGMVQFQKFFNPVTPFNPDLIPK 180 Query 284 SALGAGLGLRSAISSGLGSTAPAISAGASQAGSVGGMSVPPSWAAATPAIRTVAAVFSST 343 SALGAGLGLRSAISSGLGSTAPAISAGASQAGSVGGMSVPPSWAAATPAIRTVAAVFSST Sbjct 181 SALGAGLGLRSAISSGLGSTAPAISAGASQAGSVGGMSVPPSWAAATPAIRTVAAVFSST 240 Query 344 GLQAVPAAAISEGSLLSQMALASVAGGALGGAAARATGGFLGGGRVTAVKKSLKDSDSPD 403 GLQAVPAAAISEGSLLSQMALASVAGGALGGAAARATGGFLGGGRVTAVKKSLKDSDSPD Sbjct 241 GLQAVPAAAISEGSLLSQMALASVAGGALGGAAARATGGFLGGGRVTAVKKSLKDSDSPD 300 Query 404 KLRRVVAHMMEKPESVQHWHTDEDGLDDLLAELKKKPGIHAVHMAGGNKAEIAPTISESG 463 KLRRVVAHMMEKPESVQHWHTDEDGLDDLLAELKKKPGIHAVHMAGGNKAEIAPTISESG Sbjct 301 KLRRVVAHMMEKPESVQHWHTDEDGLDDLLAELKKKPGIHAVHMAGGNKAEIAPTISESG 360 >gi|289761952|ref|ZP_06521330.1| PPE family protein [Mycobacterium tuberculosis GM 1503] gi|289709458|gb|EFD73474.1| PPE family protein [Mycobacterium tuberculosis GM 1503] Length=389 Score = 643 bits (1659), Expect = 0.0, Method: Compositional matrix adjust. Identities = 351/352 (99%), Positives = 351/352 (99%), Gaps = 0/352 (0%) Query 112 NRAELAVLAATNIFGQNTGAIAAAEARYAEMWAQDAAAMYGYAGSSSVATQVTPFAAPPP 171 RAELAVLAATNIFGQNTGAIAAAEARYAEMWAQDAAAMYGYAGSSSVATQVTPFAAPPP Sbjct 38 QRAELAVLAATNIFGQNTGAIAAAEARYAEMWAQDAAAMYGYAGSSSVATQVTPFAAPPP 97 Query 172 TTNAAGLATQGVAVAQAVGASAGNARSLVSEVLEFLATAGTNYNKTVASLMNAVTGVPYA 231 TTNAAGLATQGVAVAQAVGASAGNARSLVSEVLEFLATAGTNYNKTVASLMNAVTGVPYA Sbjct 98 TTNAAGLATQGVAVAQAVGASAGNARSLVSEVLEFLATAGTNYNKTVASLMNAVTGVPYA 157 Query 232 SSVYNSMLGLGFAESKMVLPANDTVISTIFGMVQFQKFFNPVTPFNPDLIPKSALGAGLG 291 SSVYNSMLGLGFAESKMVLPANDTVISTIFGMVQFQKFFNPVTPFNPDLIPKSALGAGLG Sbjct 158 SSVYNSMLGLGFAESKMVLPANDTVISTIFGMVQFQKFFNPVTPFNPDLIPKSALGAGLG 217 Query 292 LRSAISSGLGSTAPAISAGASQAGSVGGMSVPPSWAAATPAIRTVAAVFSSTGLQAVPAA 351 LRSAISSGLGSTAPAISAGASQAGSVGGMSVPPSWAAATPAIRTVAAVFSSTGLQAVPAA Sbjct 218 LRSAISSGLGSTAPAISAGASQAGSVGGMSVPPSWAAATPAIRTVAAVFSSTGLQAVPAA 277 Query 352 AISEGSLLSQMALASVAGGALGGAAARATGGFLGGGRVTAVKKSLKDSDSPDKLRRVVAH 411 AISEGSLLSQMALASVAGGALGGAAARATGGFLGGGRVTAVKKSLKDSDSPDKLRRVVAH Sbjct 278 AISEGSLLSQMALASVAGGALGGAAARATGGFLGGGRVTAVKKSLKDSDSPDKLRRVVAH 337 Query 412 MMEKPESVQHWHTDEDGLDDLLAELKKKPGIHAVHMAGGNKAEIAPTISESG 463 MMEKPESVQHWHTDEDGLDDLLAELKKKPGIHAVHMAGGNKAEIAPTISESG Sbjct 338 MMEKPESVQHWHTDEDGLDDLLAELKKKPGIHAVHMAGGNKAEIAPTISESG 389 >gi|289574480|ref|ZP_06454707.1| PPE family protein [Mycobacterium tuberculosis K85] gi|289538911|gb|EFD43489.1| PPE family protein [Mycobacterium tuberculosis K85] Length=301 Score = 597 bits (1539), Expect = 1e-168, Method: Compositional matrix adjust. Identities = 300/301 (99%), Positives = 301/301 (100%), Gaps = 0/301 (0%) Query 163 VTPFAAPPPTTNAAGLATQGVAVAQAVGASAGNARSLVSEVLEFLATAGTNYNKTVASLM 222 +TPFAAPPPTTNAAGLATQGVAVAQAVGASAGNARSLVSEVLEFLATAGTNYNKTVASLM Sbjct 1 MTPFAAPPPTTNAAGLATQGVAVAQAVGASAGNARSLVSEVLEFLATAGTNYNKTVASLM 60 Query 223 NAVTGVPYASSVYNSMLGLGFAESKMVLPANDTVISTIFGMVQFQKFFNPVTPFNPDLIP 282 NAVTGVPYASSVYNSMLGLGFAESKMVLPANDTVISTIFGMVQFQKFFNPVTPFNPDLIP Sbjct 61 NAVTGVPYASSVYNSMLGLGFAESKMVLPANDTVISTIFGMVQFQKFFNPVTPFNPDLIP 120 Query 283 KSALGAGLGLRSAISSGLGSTAPAISAGASQAGSVGGMSVPPSWAAATPAIRTVAAVFSS 342 KSALGAGLGLRSAISSGLGSTAPAISAGASQAGSVGGMSVPPSWAAATPAIRTVAAVFSS Sbjct 121 KSALGAGLGLRSAISSGLGSTAPAISAGASQAGSVGGMSVPPSWAAATPAIRTVAAVFSS 180 Query 343 TGLQAVPAAAISEGSLLSQMALASVAGGALGGAAARATGGFLGGGRVTAVKKSLKDSDSP 402 TGLQAVPAAAISEGSLLSQMALASVAGGALGGAAARATGGFLGGGRVTAVKKSLKDSDSP Sbjct 181 TGLQAVPAAAISEGSLLSQMALASVAGGALGGAAARATGGFLGGGRVTAVKKSLKDSDSP 240 Query 403 DKLRRVVAHMMEKPESVQHWHTDEDGLDDLLAELKKKPGIHAVHMAGGNKAEIAPTISES 462 DKLRRVVAHMMEKPESVQHWHTDEDGLDDLLAELKKKPGIHAVHMAGGNKAEIAPTISES Sbjct 241 DKLRRVVAHMMEKPESVQHWHTDEDGLDDLLAELKKKPGIHAVHMAGGNKAEIAPTISES 300 Query 463 G 463 G Sbjct 301 G 301 >gi|240171260|ref|ZP_04749919.1| PPE family protein [Mycobacterium kansasii ATCC 12478] Length=472 Score = 369 bits (948), Expect = 5e-100, Method: Compositional matrix adjust. Identities = 244/465 (53%), Positives = 302/465 (65%), Gaps = 18/465 (3%) Query 1 MDFGVLPPEINSGRMYAGPGSGPMLAAAAAWDGLATELQSTAADYGSVISVLTGVWSGQS 60 M F +LPPEINSGRMYAGPGSGPML AA AWD LA +L STAA Y SVI+ LT W G S Sbjct 1 MYFALLPPEINSGRMYAGPGSGPMLTAAEAWDALAAQLYSTAASYSSVITALTATWQGPS 60 Query 61 SGTMAAAAAPYVAWMSATAALAREAAAQASAAAAAYEAAFAATVPPPVVAANRAELAVLA 120 S +MA AAAPY+AW SATAA + + AAQA AAA AYE FAA VPPPV+AANR+ELA L Sbjct 61 SVSMATAAAPYMAWTSATAAQSEQTAAQARAAAVAYETTFAAMVPPPVIAANRSELASLV 120 Query 121 ATNIFGQNTGAIAAAEARYAEMWAQDAAAMYGYAGSSSVATQVTPFAAPPPTTNAAGLAT 180 ATNIFGQNT AIAA EA+YA+MWAQDA AM YAG S+ AT +TPFAAP TT+ GL Sbjct 121 ATNIFGQNTPAIAANEAQYAQMWAQDATAMNNYAGQSAAATTLTPFAAPAATTSPGGLLG 180 Query 181 QGVAVAQA-VGASAGNARSLVSEVLEFLATAGTNYNKTVASLMNAVTGVPYASSVY---- 235 Q A+ + + ++ ++ + TA ++ T+ + N ++G+ A+ + Sbjct 181 QLAAIVNTYITQIVSSTQTQIANFFNAIPTALLSF-TTIVTGPNPISGLLTAAQDFAGMQ 239 Query 236 --NSMLGLGFAESKMVLPANDTVISTIFGMVQFQKFFN----PVTPFNPDLIPKSALGAG 289 NS+ G K++LP ND I+ I G+V K+ N S L AG Sbjct 240 NINSLTGDLELIPKLILPVNDIFITIIMGLVFQTKYLNGLASTAAGAAAGNGGGSVLAAG 299 Query 290 LGLRSAI--SSGLGSTAPAISAGASQAGSVGGMSVPPSWAAATPAIRTVAAVFSSTGLQA 347 LG + S+GLG A++A AG VGGM+VPPSWA ATPAIRTVA+V S G A Sbjct 300 LGSGPNLAGSAGLGG---AVAADVGHAGLVGGMAVPPSWATATPAIRTVASVLSGAGQNA 356 Query 348 VPAAAISEGSLLSQMALASVAGGALGGAAARATGGFLGGGRVTAVKK-SLKDSDSPDKLR 406 V A A+SEG+LLS MA A + G ALG AA R GG R T++K S KD +SP+ L+ Sbjct 357 VAAGAVSEGTLLSGMAGAGMVGSALGAAAPRGPGGGGARFRSTSLKDGSSKDGESPENLQ 416 Query 407 RVVAHMMEKPESVQHWHTDEDGLDDLLAELKKKPGIHAVHMAGGN 451 +VA M EKPE+VQHWHTD GL+ L+A+LKKKPGIHAVH+ G+ Sbjct 417 HLVAEMAEKPENVQHWHTDSAGLESLIAKLKKKPGIHAVHLTDGD 461 >gi|296170357|ref|ZP_06851948.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895080|gb|EFG74799.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=459 Score = 362 bits (930), Expect = 5e-98, Method: Compositional matrix adjust. Identities = 262/459 (58%), Positives = 298/459 (65%), Gaps = 16/459 (3%) Query 1 MDFGVLPPEINSGRMYAGPGSGPMLAAAAAWDGLATELQSTAADYGSVISVLTGVWSGQS 60 MD+GVLPPEINS RMYAGPGSG ML AAAAWD LATEL+S AA Y +VIS LT W G S Sbjct 1 MDYGVLPPEINSARMYAGPGSGSMLTAAAAWDELATELRSIAASYSAVISGLTTAWLGPS 60 Query 61 SGTMAAAAAPYVAWMSATAALAREAAAQASAAAAAYEAAFAATVPPPVVAANRAELAVLA 120 S MAAAAAPY AW++ATAA A ++ +QA AAAAAYEAAFAATVPPPV+ NRAEL L Sbjct 61 STRMAAAAAPYAAWLNATAAQAEQSGSQARAAAAAYEAAFAATVPPPVIETNRAELESLI 120 Query 121 ATNIFGQNTGAIAAAEARYAEMWAQDAAAMYGYAGSSSVATQVTPFAAPPPTTNAAGLAT 180 ATN FGQNT AIAA EARYA MWAQDAAAMYGYAG S+ A VTPF P TN AG A Sbjct 121 ATNTFGQNTAAIAANEARYARMWAQDAAAMYGYAGQSAAAAAVTPFDPPAQNTNPAGTAG 180 Query 181 QGVAVAQAVGASAG-NARSLVSEVLEFLATAGTNYNKTVA-----SLMNAVTGVPYASSV 234 Q AV+Q VG SAG N+++ +S + +A + A + A SS Sbjct 181 QTAAVSQVVGTSAGTNSQAALSHLTSATPSALRSLAAPAAVNPPSASSLASFLSSLNSSP 240 Query 235 YNSMLGLGFAESKMVLPANDTVISTIFGMVQFQKFFNPVTPFNPDLIPKSALGAGLGLRS 294 + G K VLPAND +ISTI G+V + +T P L AGLG Sbjct 241 LAKLAGNVELIPKAVLPANDVLISTIMGLVIGARHLGDLTVAVKAATP--GLAAGLGY-- 296 Query 295 AISSGLGSTAPAISAGASQAGSVGGMSVPPSWAAATPAIRTVAAVFSSTGLQAVPAAAIS 354 + LGST +SA QAG VGG++VPPSWA ATPAIRTVAAV S T AV AA +S Sbjct 297 -AAPALGST---VSATVGQAGLVGGLAVPPSWAVATPAIRTVAAVLSGTSESAVAAATVS 352 Query 355 EGSLLSQMALASVAGGALGGAAARATGGFLGGGRVTAVKK--SLKDSDSPDKLRRVVAHM 412 EGS S +A+A +AGGALG A RA G GR VK SLKD DSP+ L+RVVA M Sbjct 353 EGSFFSGLAVAGMAGGALGAALPRALPGVGVKGRKQPVKDGASLKDGDSPENLQRVVAEM 412 Query 413 MEKPESVQHWHTDEDGLDDLLAELKKKPGIHAVHMAGGN 451 E P SVQHWHTD D LD LL EL+KKPG HAVH+ G Sbjct 413 AENPGSVQHWHTDPDHLDGLLDELRKKPGTHAVHVKNGK 451 >gi|289443283|ref|ZP_06433027.1| PPE family protein [Mycobacterium tuberculosis T46] gi|339631862|ref|YP_004723504.1| PPE family protein [Mycobacterium africanum GM041182] gi|289416202|gb|EFD13442.1| PPE family protein [Mycobacterium tuberculosis T46] gi|339331218|emb|CCC26901.1| PPE family protein [Mycobacterium africanum GM041182] Length=470 Score = 347 bits (891), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 237/481 (50%), Positives = 301/481 (63%), Gaps = 47/481 (9%) Query 1 MDFGVLPPEINSGRMYAGPGSGPMLAAAAAWDGLATELQSTAADYGSVIS-VLTGVWSGQ 59 MDFG+ PPEI SG MY GPG+GPMLAAA AWDGLA ELQS AA Y S++ + + W G Sbjct 1 MDFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGP 60 Query 60 SSGTMAAAAAPYVAWMSATAALAREAAAQASAAAAAYEAAFAATVPPPVVAANRAELAVL 119 SS MAAAAAPYV WMS T+A A+ AA QA AA AYE AFAA VPPP +AANR++L L Sbjct 61 SSAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISL 120 Query 120 AATNIFGQNTGAIAAAEARYAEMWAQDAAAMYGYAGSSSVATQVTPFAAPPPTTNAAG-- 177 ATNIFGQNT AIAA EA Y EMWAQD AM+GYA SS+ A+++TPF APP TTN +G Sbjct 121 VATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATASRLTPFTAPPQTTNPSGLA 180 Query 178 -----------LATQGVAVAQAVGASAGN-ARSLVSEVLEFLATAGTNYNKTVASLMNAV 225 LA+ AV A+ ++A ++ +L+ LAT T Y + + L+NA+ Sbjct 181 GQAAATGQATALASGTNAVTTALSSAAAQFPFDIIPTLLQGLATLSTQYTQLMGQLINAI 240 Query 226 TGVPYASSVYNSMLGLGFAESKMVLPANDTVISTIFGMVQFQKFFNPVTPFNPDLIPKSA 285 G P ++ Y ++ +K AND + + GM +F+ F+ P P P+ IPKS+ Sbjct 241 FG-PTGATTYQNLFVTAANVTKFSTWANDAMSAPNLGMTEFKVFWQP--PPAPE-IPKSS 296 Query 286 LGAGLGLRSAISSGLGSTAPAISAGASQAGSVGGMSVPPSWAAATPAIRTVAAVFSSTGL 345 LGAGLGLRS +S+GL A A SAG QA VG +SVPPSWA+ATPA+R VA +T L Sbjct 297 LGAGLGLRSGLSAGL---AHAASAGLGQANLVGDLSVPPSWASATPAVRLVANTLPATSL 353 Query 346 QAVPAAAISEGSLLSQMALASVAGGAL----------GGAAARATGGFLGGGRVTAVKKS 395 A PA I +LL QMAL S+ GGAL GA ARA GG Sbjct 354 AAAPATQI-PANLLGQMALGSMTGGALGAAAPAIYTGSGARARANGG------------- 399 Query 396 LKDSDSPDKLRRVVAHMMEKPESVQHWHTDEDGLDDLLAELKKKPGIHAVHMAGGNKAEI 455 S P KL V+A + ++P++V+HW+ D+ LD LL L K+PGIHAVH++ G+K ++ Sbjct 400 -TPSAEPVKLEAVIAQLQKQPDAVRHWNVDKADLDGLLDRLSKQPGIHAVHVSNGDKPKV 458 Query 456 A 456 A Sbjct 459 A 459 >gi|148823022|ref|YP_001287776.1| PPE family protein [Mycobacterium tuberculosis F11] gi|253799147|ref|YP_003032148.1| PPE family protein [Mycobacterium tuberculosis KZN 1435] gi|254364637|ref|ZP_04980683.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem] gi|289554417|ref|ZP_06443627.1| PPE family protein [Mycobacterium tuberculosis KZN 605] gi|134150151|gb|EBA42196.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem] gi|148721549|gb|ABR06174.1| PPE family protein [Mycobacterium tuberculosis F11] gi|253320650|gb|ACT25253.1| PPE family protein [Mycobacterium tuberculosis KZN 1435] gi|289439049|gb|EFD21542.1| PPE family protein [Mycobacterium tuberculosis KZN 605] Length=470 Score = 347 bits (891), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 237/481 (50%), Positives = 301/481 (63%), Gaps = 47/481 (9%) Query 1 MDFGVLPPEINSGRMYAGPGSGPMLAAAAAWDGLATELQSTAADYGSVIS-VLTGVWSGQ 59 MDFG+ PPEI SG MY GPG+GPMLAAA AWDGLA ELQS AA Y S++ + + W G Sbjct 3 MDFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGP 62 Query 60 SSGTMAAAAAPYVAWMSATAALAREAAAQASAAAAAYEAAFAATVPPPVVAANRAELAVL 119 SS MAAAAAPYV WMS T+A A+ AA QA AA AYE AFAA VPPP +AANR++L L Sbjct 63 SSAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISL 122 Query 120 AATNIFGQNTGAIAAAEARYAEMWAQDAAAMYGYAGSSSVATQVTPFAAPPPTTNAAG-- 177 ATNIFGQNT AIAA EA Y EMWAQD AM+GYA SS+ A+++TPF APP TTN +G Sbjct 123 VATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATASRLTPFTAPPQTTNPSGLA 182 Query 178 -----------LATQGVAVAQAVGASAGN-ARSLVSEVLEFLATAGTNYNKTVASLMNAV 225 LA+ AV A+ ++A ++ +L+ LAT T Y + + L+NA+ Sbjct 183 GQAAATGQATALASGTNAVTTALSSAAAQFPFDIIPTLLQGLATLSTQYTQLMGQLINAI 242 Query 226 TGVPYASSVYNSMLGLGFAESKMVLPANDTVISTIFGMVQFQKFFNPVTPFNPDLIPKSA 285 G P ++ Y ++ +K AND + + GM +F+ F+ P P P+ IPKS+ Sbjct 243 FG-PTGATTYQNLFVTAANVTKFSTWANDAMSAPNLGMTEFKVFWQP--PPAPE-IPKSS 298 Query 286 LGAGLGLRSAISSGLGSTAPAISAGASQAGSVGGMSVPPSWAAATPAIRTVAAVFSSTGL 345 LGAGLGLRS +S+GL A A SAG QA VG +SVPPSWA+ATPA+R VA +T L Sbjct 299 LGAGLGLRSGLSAGL---AHAASAGLGQANLVGDLSVPPSWASATPAVRLVANTLPATSL 355 Query 346 QAVPAAAISEGSLLSQMALASVAGGAL----------GGAAARATGGFLGGGRVTAVKKS 395 A PA I +LL QMAL S+ GGAL GA ARA GG Sbjct 356 AAAPATQI-PANLLGQMALGSMTGGALGAAAPAIYTGSGARARANGG------------- 401 Query 396 LKDSDSPDKLRRVVAHMMEKPESVQHWHTDEDGLDDLLAELKKKPGIHAVHMAGGNKAEI 455 S P KL V+A + ++P++V+HW+ D+ LD LL L K+PGIHAVH++ G+K ++ Sbjct 402 -TPSAEPVKLEAVIAQLQKQPDAVRHWNVDKADLDGLLDRLSKQPGIHAVHVSNGDKPKV 460 Query 456 A 456 A Sbjct 461 A 461 >gi|289447423|ref|ZP_06437167.1| PPE family protein [Mycobacterium tuberculosis CPHL_A] gi|289569881|ref|ZP_06450108.1| PPE family protein [Mycobacterium tuberculosis T17] gi|289750382|ref|ZP_06509760.1| PPE family protein [Mycobacterium tuberculosis T92] gi|289753904|ref|ZP_06513282.1| PPE family protein [Mycobacterium tuberculosis EAS054] gi|289420381|gb|EFD17582.1| PPE family protein [Mycobacterium tuberculosis CPHL_A] gi|289543635|gb|EFD47283.1| PPE family protein [Mycobacterium tuberculosis T17] gi|289690969|gb|EFD58398.1| PPE family protein [Mycobacterium tuberculosis T92] gi|289694491|gb|EFD61920.1| PPE family protein [Mycobacterium tuberculosis EAS054] Length=472 Score = 347 bits (890), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 237/481 (50%), Positives = 301/481 (63%), Gaps = 47/481 (9%) Query 1 MDFGVLPPEINSGRMYAGPGSGPMLAAAAAWDGLATELQSTAADYGSVIS-VLTGVWSGQ 59 MDFG+ PPEI SG MY GPG+GPMLAAA AWDGLA ELQS AA Y S++ + + W G Sbjct 3 MDFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGP 62 Query 60 SSGTMAAAAAPYVAWMSATAALAREAAAQASAAAAAYEAAFAATVPPPVVAANRAELAVL 119 SS MAAAAAPYV WMS T+A A+ AA QA AA AYE AFAA VPPP +AANR++L L Sbjct 63 SSAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISL 122 Query 120 AATNIFGQNTGAIAAAEARYAEMWAQDAAAMYGYAGSSSVATQVTPFAAPPPTTNAAG-- 177 ATNIFGQNT AIAA EA Y EMWAQD AM+GYA SS+ A+++TPF APP TTN +G Sbjct 123 VATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATASRLTPFTAPPQTTNPSGLA 182 Query 178 -----------LATQGVAVAQAVGASAGN-ARSLVSEVLEFLATAGTNYNKTVASLMNAV 225 LA+ AV A+ ++A ++ +L+ LAT T Y + + L+NA+ Sbjct 183 GQAAATGQATALASGTNAVTTALSSAAAQFPFDIIPTLLQGLATLSTQYTQLMGQLINAI 242 Query 226 TGVPYASSVYNSMLGLGFAESKMVLPANDTVISTIFGMVQFQKFFNPVTPFNPDLIPKSA 285 G P ++ Y ++ +K AND + + GM +F+ F+ P P P+ IPKS+ Sbjct 243 FG-PTGATTYQNLFVTAANVTKFSTWANDAMSAPNLGMTEFKVFWQP--PPAPE-IPKSS 298 Query 286 LGAGLGLRSAISSGLGSTAPAISAGASQAGSVGGMSVPPSWAAATPAIRTVAAVFSSTGL 345 LGAGLGLRS +S+GL A A SAG QA VG +SVPPSWA+ATPA+R VA +T L Sbjct 299 LGAGLGLRSGLSAGL---AHAASAGLGQANLVGDLSVPPSWASATPAVRLVANTLPATSL 355 Query 346 QAVPAAAISEGSLLSQMALASVAGGAL----------GGAAARATGGFLGGGRVTAVKKS 395 A PA I +LL QMAL S+ GGAL GA ARA GG Sbjct 356 AAAPATQI-PANLLGQMALGSMTGGALGAAAPAIYTGSGARARANGG------------- 401 Query 396 LKDSDSPDKLRRVVAHMMEKPESVQHWHTDEDGLDDLLAELKKKPGIHAVHMAGGNKAEI 455 S P KL V+A + ++P++V+HW+ D+ LD LL L K+PGIHAVH++ G+K ++ Sbjct 402 -TPSAEPVKLEAVIAQLQKQPDAVRHWNVDKADLDGLLDRLSKQPGIHAVHVSNGDKPKV 460 Query 456 A 456 A Sbjct 461 A 461 >gi|254231991|ref|ZP_04925318.1| PPE family protein [Mycobacterium tuberculosis C] gi|254550817|ref|ZP_05141264.1| PPE family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|289757912|ref|ZP_06517290.1| PPE family protein [Mycobacterium tuberculosis T85] 32 more sequence titles Length=468 Score = 347 bits (890), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 237/481 (50%), Positives = 301/481 (63%), Gaps = 47/481 (9%) Query 1 MDFGVLPPEINSGRMYAGPGSGPMLAAAAAWDGLATELQSTAADYGSVIS-VLTGVWSGQ 59 MDFG+ PPEI SG MY GPG+GPMLAAA AWDGLA ELQS AA Y S++ + + W G Sbjct 1 MDFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGP 60 Query 60 SSGTMAAAAAPYVAWMSATAALAREAAAQASAAAAAYEAAFAATVPPPVVAANRAELAVL 119 SS MAAAAAPYV WMS T+A A+ AA QA AA AYE AFAA VPPP +AANR++L L Sbjct 61 SSAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISL 120 Query 120 AATNIFGQNTGAIAAAEARYAEMWAQDAAAMYGYAGSSSVATQVTPFAAPPPTTNAAG-- 177 ATNIFGQNT AIAA EA Y EMWAQD AM+GYA SS+ A+++TPF APP TTN +G Sbjct 121 VATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATASRLTPFTAPPQTTNPSGLA 180 Query 178 -----------LATQGVAVAQAVGASAGN-ARSLVSEVLEFLATAGTNYNKTVASLMNAV 225 LA+ AV A+ ++A ++ +L+ LAT T Y + + L+NA+ Sbjct 181 GQAAATGQATALASGTNAVTTALSSAAAQFPFDIIPTLLQGLATLSTQYTQLMGQLINAI 240 Query 226 TGVPYASSVYNSMLGLGFAESKMVLPANDTVISTIFGMVQFQKFFNPVTPFNPDLIPKSA 285 G P ++ Y ++ +K AND + + GM +F+ F+ P P P+ IPKS+ Sbjct 241 FG-PTGATTYQNLFVTAANVTKFSTWANDAMSAPNLGMTEFKVFWQP--PPAPE-IPKSS 296 Query 286 LGAGLGLRSAISSGLGSTAPAISAGASQAGSVGGMSVPPSWAAATPAIRTVAAVFSSTGL 345 LGAGLGLRS +S+GL A A SAG QA VG +SVPPSWA+ATPA+R VA +T L Sbjct 297 LGAGLGLRSGLSAGL---AHAASAGLGQANLVGDLSVPPSWASATPAVRLVANTLPATSL 353 Query 346 QAVPAAAISEGSLLSQMALASVAGGAL----------GGAAARATGGFLGGGRVTAVKKS 395 A PA I +LL QMAL S+ GGAL GA ARA GG Sbjct 354 AAAPATQI-PANLLGQMALGSMTGGALGAAAPAIYTGSGARARANGG------------- 399 Query 396 LKDSDSPDKLRRVVAHMMEKPESVQHWHTDEDGLDDLLAELKKKPGIHAVHMAGGNKAEI 455 S P KL V+A + ++P++V+HW+ D+ LD LL L K+PGIHAVH++ G+K ++ Sbjct 400 -TPSAEPVKLEAVIAQLQKQPDAVRHWNVDKADLDGLLDRLSKQPGIHAVHVSNGDKPKV 458 Query 456 A 456 A Sbjct 459 A 459 >gi|289574486|ref|ZP_06454713.1| PPE family protein [Mycobacterium tuberculosis K85] gi|289538917|gb|EFD43495.1| PPE family protein [Mycobacterium tuberculosis K85] Length=470 Score = 346 bits (888), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 237/471 (51%), Positives = 303/471 (65%), Gaps = 27/471 (5%) Query 1 MDFGVLPPEINSGRMYAGPGSGPMLAAAAAWDGLATELQSTAADYGSVIS-VLTGVWSGQ 59 MDFG+ PPEI SG MY GPG+GPMLAAA AWDGLA ELQS AA Y S++ + + W G Sbjct 1 MDFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGP 60 Query 60 SSGTMAAAAAPYVAWMSATAALAREAAAQASAAAAAYEAAFAATVPPPVVAANRAELAVL 119 SS MAAAAAPYV WMS T+A A+ AA QA AA AYE AFAA VPPP +AANR++L L Sbjct 61 SSAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISL 120 Query 120 AATNIFGQNTGAIAAAEARYAEMWAQDAAAMYGYAGSSSVATQVTPFAAPPPTTNAAG-- 177 ATNIFGQNT AIAA EA Y EMWAQD AM+GYA SS+ A+++TPF APP TTN +G Sbjct 121 VATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATASRLTPFTAPPQTTNPSGLA 180 Query 178 -----------LATQGVAVAQAVGASAGN-ARSLVSEVLEFLATAGTNYNKTVASLMNAV 225 LA+ AV A+ ++A ++ +L+ LAT T Y + + L+NA+ Sbjct 181 GQAAATGQATALASGTNAVTTALSSAAAQFPFDIIPTLLQGLATLSTQYTQLMGQLINAI 240 Query 226 TGVPYASSVYNSMLGLGFAESKMVLPANDTVISTIFGMVQFQKFFNPVTPFNPDLIPKSA 285 G P ++ Y ++ +K AND + + GM +F+ F+ P P P+ IPKS+ Sbjct 241 FG-PTGATTYQNLFVTAANVTKFSTWANDAMSAPNLGMTEFKVFWQP--PPAPE-IPKSS 296 Query 286 LGAGLGLRSAISSGLGSTAPAISAGASQAGSVGGMSVPPSWAAATPAIRTVAAVFSSTGL 345 LGAGLGLRS +S+GL A A SAG QA VG +SVPPSWA+ATPA+R VA +T L Sbjct 297 LGAGLGLRSGLSAGL---AHAASAGLGQANLVGDLSVPPSWASATPAVRLVANTLPATSL 353 Query 346 QAVPAAAISEGSLLSQMALASVAGGALGGAAARATGGFLGGGRVTAVKKSLKDSDSPDKL 405 A PA I +LL QMAL S+ GGALG AA G G R A ++ S P KL Sbjct 354 AAAPATQI-PANLLGQMALGSMTGGALGAAAPAIYTG--SGARARANGRT--PSAEPVKL 408 Query 406 RRVVAHMMEKPESVQHWHTDEDGLDDLLAELKKKPGIHAVHMAGGNKAEIA 456 V+A + ++P++V+HW+ D+ LD LL L K+PGIHAVH++ G+K ++A Sbjct 409 EAVIAQLQKQPDAVRHWNVDKADLDGLLDRLSKQPGIHAVHVSNGDKPKVA 459 >gi|57116922|ref|YP_177845.1| PPE family protein [Mycobacterium tuberculosis H37Rv] gi|148661615|ref|YP_001283138.1| PPE family protein [Mycobacterium tuberculosis H37Ra] gi|167967396|ref|ZP_02549673.1| PPE family protein [Mycobacterium tuberculosis H37Ra] 11 more sequence titles Length=468 Score = 346 bits (888), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 237/481 (50%), Positives = 301/481 (63%), Gaps = 47/481 (9%) Query 1 MDFGVLPPEINSGRMYAGPGSGPMLAAAAAWDGLATELQSTAADYGSVIS-VLTGVWSGQ 59 MDFG+ PPEI SG MY GPG+GPMLAAA AWDGLA ELQS AA Y S++ + + W G Sbjct 1 MDFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGP 60 Query 60 SSGTMAAAAAPYVAWMSATAALAREAAAQASAAAAAYEAAFAATVPPPVVAANRAELAVL 119 SS MAAAAAPYV WMS T+A A+ AA QA AA AYE AFAA VPPP +AANR++L L Sbjct 61 SSAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISL 120 Query 120 AATNIFGQNTGAIAAAEARYAEMWAQDAAAMYGYAGSSSVATQVTPFAAPPPTTNAAG-- 177 ATNIFGQNT AIAA EA Y EMWAQD AM+GYA SS+ A+++TPF APP TTN +G Sbjct 121 VATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATASRLTPFTAPPQTTNPSGLA 180 Query 178 -----------LATQGVAVAQAVGASAGN-ARSLVSEVLEFLATAGTNYNKTVASLMNAV 225 LA+ AV A+ ++A ++ +L+ LAT T Y + + L+NA+ Sbjct 181 GQAAATGQATALASGTNAVTTALSSAAAQFPFDIIPTLLQGLATLSTQYTQLMGQLINAI 240 Query 226 TGVPYASSVYNSMLGLGFAESKMVLPANDTVISTIFGMVQFQKFFNPVTPFNPDLIPKSA 285 G P ++ Y ++ +K AND + + GM +F+ F+ P P P+ IPKS+ Sbjct 241 FG-PTGATTYQNVFVTAANVTKFSTWANDAMSAPNLGMTEFKVFWQP--PPAPE-IPKSS 296 Query 286 LGAGLGLRSAISSGLGSTAPAISAGASQAGSVGGMSVPPSWAAATPAIRTVAAVFSSTGL 345 LGAGLGLRS +S+GL A A SAG QA VG +SVPPSWA+ATPA+R VA +T L Sbjct 297 LGAGLGLRSGLSAGL---AHAASAGLGQANLVGDLSVPPSWASATPAVRLVANTLPATSL 353 Query 346 QAVPAAAISEGSLLSQMALASVAGGAL----------GGAAARATGGFLGGGRVTAVKKS 395 A PA I +LL QMAL S+ GGAL GA ARA GG Sbjct 354 AAAPATQI-PANLLGQMALGSMTGGALGAAAPAIYTGSGARARANGG------------- 399 Query 396 LKDSDSPDKLRRVVAHMMEKPESVQHWHTDEDGLDDLLAELKKKPGIHAVHMAGGNKAEI 455 S P KL V+A + ++P++V+HW+ D+ LD LL L K+PGIHAVH++ G+K ++ Sbjct 400 -TPSAEPVKLEAVIAQLQKQPDAVRHWNVDKADLDGLLDRLSKQPGIHAVHVSNGDKPKV 458 Query 456 A 456 A Sbjct 459 A 459 >gi|340626818|ref|YP_004745270.1| PPE family protein [Mycobacterium canettii CIPT 140010059] gi|340005008|emb|CCC44157.1| PPE family protein [Mycobacterium canettii CIPT 140010059] Length=470 Score = 346 bits (887), Expect = 5e-93, Method: Compositional matrix adjust. Identities = 236/481 (50%), Positives = 300/481 (63%), Gaps = 47/481 (9%) Query 1 MDFGVLPPEINSGRMYAGPGSGPMLAAAAAWDGLATELQSTAADYGSVIS-VLTGVWSGQ 59 MDFG+ PPEI SG MY GPG+GPMLAAA AWDGLA ELQS AA Y S++ + + W G Sbjct 1 MDFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGP 60 Query 60 SSGTMAAAAAPYVAWMSATAALAREAAAQASAAAAAYEAAFAATVPPPVVAANRAELAVL 119 SS MAAAAAPYV WMS T+A A+ AA QA AA AYE AFAA VPPP +AANR++L L Sbjct 61 SSAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISL 120 Query 120 AATNIFGQNTGAIAAAEARYAEMWAQDAAAMYGYAGSSSVATQVTPFAAPPPTTNAAG-- 177 ATNIFGQNT AIAA EA Y EMWAQD AM+GYA SS+ A+++TPF PP TTN +G Sbjct 121 VATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATASRLTPFTVPPQTTNPSGLA 180 Query 178 -----------LATQGVAVAQAVGASAGN-ARSLVSEVLEFLATAGTNYNKTVASLMNAV 225 LA+ AV A+ ++A ++ +L+ LAT T Y + + L+NA+ Sbjct 181 GQAAATGQATALASGTNAVTTALSSAAAQFPFDIIPTLLQGLATLSTQYTQLMGQLINAI 240 Query 226 TGVPYASSVYNSMLGLGFAESKMVLPANDTVISTIFGMVQFQKFFNPVTPFNPDLIPKSA 285 G P ++ Y ++ +K AND + + GM +F+ F+ P P P+ IPKS+ Sbjct 241 FG-PTGATTYQNLFVTAANVTKFSTWANDAMSAPNLGMTEFKVFWQP--PPAPE-IPKSS 296 Query 286 LGAGLGLRSAISSGLGSTAPAISAGASQAGSVGGMSVPPSWAAATPAIRTVAAVFSSTGL 345 LGAGLGLRS +S+GL A A SAG QA VG +SVPPSWA+ATPA+R VA +T L Sbjct 297 LGAGLGLRSGLSAGL---AHAASAGLGQANLVGDLSVPPSWASATPAVRLVANTLPATSL 353 Query 346 QAVPAAAISEGSLLSQMALASVAGGAL----------GGAAARATGGFLGGGRVTAVKKS 395 A PA I +LL QMAL S+ GGAL GA ARA GG Sbjct 354 AAAPATQI-PANLLGQMALGSMTGGALGAAAPAIYTGSGARARANGG------------- 399 Query 396 LKDSDSPDKLRRVVAHMMEKPESVQHWHTDEDGLDDLLAELKKKPGIHAVHMAGGNKAEI 455 S P KL V+A + ++P++V+HW+ D+ LD LL L K+PGIHAVH++ G+K ++ Sbjct 400 -TPSAEPVKLEAVIAQLQKQPDAVRHWNVDKADLDGLLDRLSKQPGIHAVHVSNGDKPKV 458 Query 456 A 456 A Sbjct 459 A 459 >gi|15841279|ref|NP_336316.1| PPE family protein [Mycobacterium tuberculosis CDC1551] gi|13881507|gb|AAK46130.1| PPE family protein [Mycobacterium tuberculosis CDC1551] Length=694 Score = 345 bits (884), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 237/481 (50%), Positives = 301/481 (63%), Gaps = 47/481 (9%) Query 1 MDFGVLPPEINSGRMYAGPGSGPMLAAAAAWDGLATELQSTAADYGSVISVL-TGVWSGQ 59 MDFG+ PPEI SG MY GPG+GPMLAAA AWDGLA ELQS AA Y S++ + + W G Sbjct 227 MDFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGP 286 Query 60 SSGTMAAAAAPYVAWMSATAALAREAAAQASAAAAAYEAAFAATVPPPVVAANRAELAVL 119 SS MAAAAAPYV WMS T+A A+ AA QA AA AYE AFAA VPPP +AANR++L L Sbjct 287 SSAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISL 346 Query 120 AATNIFGQNTGAIAAAEARYAEMWAQDAAAMYGYAGSSSVATQVTPFAAPPPTTNAAG-- 177 ATNIFGQNT AIAA EA Y EMWAQD AM+GYA SS+ A+++TPF APP TTN +G Sbjct 347 VATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATASRLTPFTAPPQTTNPSGLA 406 Query 178 -----------LATQGVAVAQAVGASAGN-ARSLVSEVLEFLATAGTNYNKTVASLMNAV 225 LA+ AV A+ ++A ++ +L+ LAT T Y + + L+NA+ Sbjct 407 GQAAATGQATALASGTNAVTTALSSAAAQFPFDIIPTLLQGLATLSTQYTQLMGQLINAI 466 Query 226 TGVPYASSVYNSMLGLGFAESKMVLPANDTVISTIFGMVQFQKFFNPVTPFNPDLIPKSA 285 G P ++ Y ++ +K AND + + GM +F+ F+ P P P+ IPKS+ Sbjct 467 FG-PTGATTYQNLFVTAANVTKFSTWANDAMSAPNLGMTEFKVFWQP--PPAPE-IPKSS 522 Query 286 LGAGLGLRSAISSGLGSTAPAISAGASQAGSVGGMSVPPSWAAATPAIRTVAAVFSSTGL 345 LGAGLGLRS +S+GL A A SAG QA VG +SVPPSWA+ATPA+R VA +T L Sbjct 523 LGAGLGLRSGLSAGL---AHAASAGLGQANLVGDLSVPPSWASATPAVRLVANTLPATSL 579 Query 346 QAVPAAAISEGSLLSQMALASVAGGAL----------GGAAARATGGFLGGGRVTAVKKS 395 A PA I +LL QMAL S+ GGAL GA ARA GG Sbjct 580 AAAPATQI-PANLLGQMALGSMTGGALGAAAPAIYTGSGARARANGG------------- 625 Query 396 LKDSDSPDKLRRVVAHMMEKPESVQHWHTDEDGLDDLLAELKKKPGIHAVHMAGGNKAEI 455 S P KL V+A + ++P++V+HW+ D+ LD LL L K+PGIHAVH++ G+K ++ Sbjct 626 -TPSAEPVKLEAVIAQLQKQPDAVRHWNVDKADLDGLLDRLSKQPGIHAVHVSNGDKPKV 684 Query 456 A 456 A Sbjct 685 A 685 >gi|183982692|ref|YP_001850983.1| PPE family protein, PPE30 [Mycobacterium marinum M] gi|183176018|gb|ACC41128.1| PPE family protein, PPE30 [Mycobacterium marinum M] Length=468 Score = 332 bits (852), Expect = 6e-89, Method: Compositional matrix adjust. Identities = 249/473 (53%), Positives = 304/473 (65%), Gaps = 15/473 (3%) Query 1 MDFGVLPPEINSGRMYAGPGSGPMLAAAAAWDGLATELQSTAADYGSVISVLT-GVWSGQ 59 M + PPEINSGRMY GPGSGP+LAAAAAWD +A ELQSTAA + SVI+ LT G W G Sbjct 1 MFYAAFPPEINSGRMYTGPGSGPLLAAAAAWDAVAAELQSTAAAFSSVIASLTSGPWIGP 60 Query 60 SSGTMAAAAAPYVAWMSATAALAREAAAQASAAAAAYEAAFAATVPPPVVAANRAELAVL 119 SS MAAA APYV WM ATAA A +AA QA+AAA AYE AFAA VPP +AANRA+LA+L Sbjct 61 SSLAMAAAVAPYVTWMGATAAQAAQAATQATAAATAYETAFAAHVPPVEIAANRAQLAML 120 Query 120 AATNIFGQNTGAIAAAEARYAEMWAQDAAAMYGYAGSSSVATQVTPFAAPPPTTNAAGLA 179 ATN+FGQNT AIAAAE++YAEMWAQDA AM GYA SS+ A++VTPFA PP NAAGLA Sbjct 121 VATNLFGQNTAAIAAAESQYAEMWAQDATAMDGYASSSAAASEVTPFAEPPQVVNAAGLA 180 Query 180 TQGVAVAQAVGASAGN------ARSLVSEVLEFLATAGTNYNKTVASLMNAVTGVPYASS 233 +Q V QA AS A +S +L+ A T Y V +L+N + G P ++ Sbjct 181 SQAAVVGQAAAASPAATVQDLLATGPISWLLQLGADLSTGYTAAVTALLNGLFG-PSGAT 239 Query 234 VYNSMLGLGFAESKMVLPANDTVISTIFGMVQFQKFFNPVTPFNPDLIPKSALGAGLGLR 293 Y ++ ND + F QF K F P P +PK ALG GLGL Sbjct 240 TYLTLYNAIKTPLNFTTGFNDIGLLINFPASQFLK-FAPHPGLGP--LPKDALGGGLGLA 296 Query 294 SAISSGLGSTAPAISAGASQAGS---VGGMSVPPSWAAATPAIRTVAAVFSSTGLQAVPA 350 + G +A A G VG ++VPPSWAAATP IRTVAA S+ G +AVPA Sbjct 297 PHWNQGTLFSAIQPEAMTPHWGRGTLVGKLTVPPSWAAATPTIRTVAAALSAAGPEAVPA 356 Query 351 AAISEGSLLSQMALASVAGGALGGAAARATGGFLGGGRVTAVKKSLKDSDSPDKLRRVVA 410 AA+ EG LLS MA+A + G A G A A R+T + K LKD+ SP+KL+R+VA Sbjct 357 AALGEGGLLSSMAVAGMLGSAFGAGAPDAYKRAGVRSRLTPL-KDLKDATSPEKLKRLVA 415 Query 411 HMMEKPESVQHWHTDEDGLDDLLAELKKKPGIHAVHMAGGNKAEIAPTISESG 463 + EKPESVQH D++GLD LL +L KKPGIHAVH++ G+KA++ PT ++ G Sbjct 416 QISEKPESVQHHTVDQEGLDSLLEQLAKKPGIHAVHLSKGDKAKVVPTDAQPG 468 >gi|183981477|ref|YP_001849768.1| PPE family protein [Mycobacterium marinum M] gi|183174803|gb|ACC39913.1| PPE family protein [Mycobacterium marinum M] Length=469 Score = 324 bits (831), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 232/474 (49%), Positives = 300/474 (64%), Gaps = 16/474 (3%) Query 1 MDFGVLPPEINSGRMYAGPGSGPMLAAAAAWDGLATELQSTAADYGSVIS-VLTGVWSGQ 59 M + PPEINSGRMY GPGSGPMLAAA AW+GLA ELQSTAA Y SVIS +++G W G Sbjct 1 MFYAAFPPEINSGRMYTGPGSGPMLAAAVAWNGLAAELQSTAASYSSVISGLISGSWVGP 60 Query 60 SSGTMAAAAAPYVAWMSATAALAREAAAQASAAAAAYEAAFAATVPPPVVAANRAELAVL 119 S+ MAAAA PYV W+++TAA A +AA QA+AAA AYE AFAA VPPPV+A NR++LA L Sbjct 61 SALAMAAAAGPYVTWVNSTAAQATQAADQATAAAGAYEIAFAAHVPPPVIATNRSQLAAL 120 Query 120 AATNIFGQNTGAIAAAEARYAEMWAQDAAAMYGYAGSSSVATQVTPFAAPPPTTNAAGL- 178 A+N+ GQNT AIAA EA+YAEMW QDA AM YA +S+ A+QVTPF+ PP +A+GL Sbjct 121 VASNLVGQNTAAIAATEAQYAEMWVQDAIAMDTYASASAAASQVTPFSEPPQIVDASGLA 180 Query 179 -----ATQGVAVAQAVGASAGNARSLVSEVLEFLATAGTNYNKTVASLMNAVTGVPYASS 233 A Q + + A A A + +S +L+ A Y T L+N + G P + Sbjct 181 NQAAAAGQAASTSAGAAAQAILANNPISALLQLGADLANGYTATATQLLNTLFG-PSGAE 239 Query 234 VYNSMLGLGFAESKMVLPANDTVISTIFGMVQFQKFFNPVTPFNPDLIPKSALGAGLGLR 293 Y ++ G S + ND + + Q K+ N F ++PK ALG GLGL Sbjct 240 TYLTLFGAVDEVSSNLAVLNDEGLLVNLPISQALKYGNKPVEFG--VLPKDALGGGLGLA 297 Query 294 SAISSG--LGSTAP-AISAGASQAGSVGGMSVPPSWAAATPAIRTVAAVFSSTGLQAVPA 350 G G+ P ++A + VG +SVPPSWA ATP IR VAA S+ G AV A Sbjct 298 PNFGKGTLFGAIRPDDVAAHFGRGTLVGKLSVPPSWAVATPDIRAVAAALSAAGPHAVSA 357 Query 351 AAISEGSLLSQMALASVAGGALGGAAARAT-GGFLGGGRVTAVKKSLKDSDSPDKLRRVV 409 AA+ +GSLLS M++A +AG A G A A G + GGR T + LKD SP+KL+R+V Sbjct 358 AALGQGSLLSSMSMAGMAGAAFGAGAPSAVAGAAVKGGRNTL--EDLKDRHSPEKLKRLV 415 Query 410 AHMMEKPESVQHWHTDEDGLDDLLAELKKKPGIHAVHMAGGNKAEIAPTISESG 463 A + EKP+SVQH D++GLD LL +L KKPG+HAVH++ G K +I P+ ++ G Sbjct 416 AQISEKPDSVQHHSVDQEGLDSLLGQLSKKPGVHAVHLSKGKKPKIVPSDAQLG 469 >gi|118618456|ref|YP_906788.1| PPE family protein [Mycobacterium ulcerans Agy99] gi|118570566|gb|ABL05317.1| PPE family protein [Mycobacterium ulcerans Agy99] Length=468 Score = 318 bits (816), Expect = 9e-85, Method: Compositional matrix adjust. Identities = 243/473 (52%), Positives = 299/473 (64%), Gaps = 15/473 (3%) Query 1 MDFGVLPPEINSGRMYAGPGSGPMLAAAAAWDGLATELQSTAADYGSVISVLT-GVWSGQ 59 M + PPEINSGR+Y GPGS P+LAAAAAWD +A ELQSTAA + SVI+ LT G W G Sbjct 1 MFYAAFPPEINSGRVYTGPGSEPLLAAAAAWDAVAAELQSTAAAFSSVIASLTSGPWIGP 60 Query 60 SSGTMAAAAAPYVAWMSATAALAREAAAQASAAAAAYEAAFAATVPPPVVAANRAELAVL 119 SS MAAA APYV WM ATA A +AA QA+AAA AYE AFAA VPP +AANRA+LA+L Sbjct 61 SSLAMAAAVAPYVTWMGATATQAAQAATQATAAATAYETAFAAHVPPVEIAANRAQLAML 120 Query 120 AATNIFGQNTGAIAAAEARYAEMWAQDAAAMYGYAGSSSVATQVTPFAAPPPTTNAAGLA 179 ATN+FGQNT AIAAAE++YAEMWAQDA AM GYA SS+ A++VTP A P NAAGLA Sbjct 121 VATNLFGQNTAAIAAAESQYAEMWAQDATAMDGYASSSAAASEVTPVAEPRQVVNAAGLA 180 Query 180 TQGVAVAQAVGASAGN------ARSLVSEVLEFLATAGTNYNKTVASLMNAVTGVPYASS 233 +Q V QA AS A +S +L+ A T Y V +L+N + G P ++ Sbjct 181 SQAAVVGQAAAASPAATVQDLLATGPISWLLQLGADLSTGYTAAVTALLNGLFG-PSGAT 239 Query 234 VYNSMLGLGFAESKMVLPANDTVISTIFGMVQFQKFFNPVTPFNPDLIPKSALGAGLGLR 293 Y ++ ND + F Q K F P P +PK ALG GLGL Sbjct 240 TYLTLYNAIKTPLNFTTGFNDIGLLINFPASQLLK-FAPHPGLGP--LPKDALGGGLGLA 296 Query 294 SAISSGLGSTAPAISAGASQAGS---VGGMSVPPSWAAATPAIRTVAAVFSSTGLQAVPA 350 + G +A A G VG ++VPPSWAAATP IRTVAA S+ G +AVPA Sbjct 297 PHWNQGTLFSAIQPEAMTPHWGRGTLVGKLTVPPSWAAATPTIRTVAAALSAAGPEAVPA 356 Query 351 AAISEGSLLSQMALASVAGGALGGAAARATGGFLGGGRVTAVKKSLKDSDSPDKLRRVVA 410 AA+ EG LLS MA+A + G A G A A R+T + K LKD+ SP+KL+R+VA Sbjct 357 AALGEGGLLSSMAVAGMLGSAFGAGAPDAYKRAGVRSRLTPL-KDLKDATSPEKLKRLVA 415 Query 411 HMMEKPESVQHWHTDEDGLDDLLAELKKKPGIHAVHMAGGNKAEIAPTISESG 463 + EKPESVQH D++GLD LL +L KKPGIHAVH++ G+KA++ PT ++ G Sbjct 416 QISEKPESVQHHTVDQEGLDSLLEQLAKKPGIHAVHLSKGDKAKVVPTDAQPG 468 >gi|289574479|ref|ZP_06454706.1| PPE family protein [Mycobacterium tuberculosis K85] gi|289538910|gb|EFD43488.1| PPE family protein [Mycobacterium tuberculosis K85] Length=161 Score = 306 bits (784), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 161/161 (100%), Positives = 161/161 (100%), Gaps = 0/161 (0%) Query 1 MDFGVLPPEINSGRMYAGPGSGPMLAAAAAWDGLATELQSTAADYGSVISVLTGVWSGQS 60 MDFGVLPPEINSGRMYAGPGSGPMLAAAAAWDGLATELQSTAADYGSVISVLTGVWSGQS Sbjct 1 MDFGVLPPEINSGRMYAGPGSGPMLAAAAAWDGLATELQSTAADYGSVISVLTGVWSGQS 60 Query 61 SGTMAAAAAPYVAWMSATAALAREAAAQASAAAAAYEAAFAATVPPPVVAANRAELAVLA 120 SGTMAAAAAPYVAWMSATAALAREAAAQASAAAAAYEAAFAATVPPPVVAANRAELAVLA Sbjct 61 SGTMAAAAAPYVAWMSATAALAREAAAQASAAAAAYEAAFAATVPPPVVAANRAELAVLA 120 Query 121 ATNIFGQNTGAIAAAEARYAEMWAQDAAAMYGYAGSSSVAT 161 ATNIFGQNTGAIAAAEARYAEMWAQDAAAMYGYAGSSSVAT Sbjct 121 ATNIFGQNTGAIAAAEARYAEMWAQDAAAMYGYAGSSSVAT 161 >gi|41407620|ref|NP_960456.1| hypothetical protein MAP1522 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395973|gb|AAS03839.1| hypothetical protein MAP_1522 [Mycobacterium avium subsp. paratuberculosis K-10] gi|336457572|gb|EGO36577.1| PPE-repeat containing protein [Mycobacterium avium subsp. paratuberculosis S397] Length=461 Score = 304 bits (779), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 236/473 (50%), Positives = 304/473 (65%), Gaps = 29/473 (6%) Query 1 MDFGVLPPEINSGRMYAGPGSGPMLAAAAAWDGLATELQSTAADYGSVISVLTG-VWSGQ 59 M+F + PPEI S ++Y GPG+GPML AAAAWD LA ELQS A+ Y +V++ L W+G Sbjct 1 MNFALQPPEITSAQLYTGPGAGPMLTAAAAWDALAAELQSAASSYAAVVNGLADEAWAGP 60 Query 60 SSGTMAAAAAPYVAWMSATAALAREAAAQASAAAAAYEAAFAATVPPPVVAANRAELAVL 119 S+ MAAAAAPYVAW+SAT+A AR AA QA+AAA+A+E+AFAA VPP VA NRA LA+L Sbjct 61 SAAAMAAAAAPYVAWLSATSAQARTAAEQATAAASAFESAFAAVVPPAEVATNRARLAML 120 Query 120 AATNIFGQNTGAIAAAEARYAEMWAQDAAAMYGYAGSSSVATQVTPFAAPPPTTNAAGLA 179 A+N+FGQN+ AIAAAEA Y +MWAQDAAAM+GYA +S+ AT++ PF PP TTN AG+A Sbjct 121 LASNVFGQNSAAIAAAEAEYGQMWAQDAAAMFGYASASAAATRLAPFTEPPKTTNDAGIA 180 Query 180 TQGVAVAQAVGASAGNA--------RSLVSEVLEFLATAGTNYNKTVASLMNAVTGVPYA 231 Q A+ +A G AG ++S++LE L A Y ++N +TG P A Sbjct 181 AQAAALGEATGRGAGTVAADATAPPSGIISQLLEALGNASRGYMDFWDQVLNTLTGSPLA 240 Query 232 SSVYNSMLGLGFAESKMVLPANDTVISTIFGMVQFQKFFN-PVTPFNPDLIPKSALGAGL 290 + + + G+ + AND++ M +F+ F+ PV + IPKSALGAGL Sbjct 241 GTTWQNTFGILADIGRFSTVANDSMSPINLAMTEFKMFYKLPVEGLD---IPKSALGAGL 297 Query 291 GLRSAISSGLGSTAPAISAGASQAGSVGGMSVPPSWAAATPAIRTVAAVFSSTGLQAVPA 350 GLRSA G G T A+S G +A +VG +SVPP+WA+ATPAIR + + +T A PA Sbjct 298 GLRSA---GAGLTG-AVSVGVGEANTVGRLSVPPTWASATPAIRLASGLTPATAAAAAPA 353 Query 351 AAISEGSLLSQMALASVAGGALGGAAARATGGFLGGGRVTAVKKSLKDSDSPDKLRRVVA 410 A I G LL QMAL SV GGALG A G G RV A K + P KL V+A Sbjct 354 AGIPAG-LLGQMALGSVTGGALGAVAPHVGSGR--GVRVRAAKPA-----EPVKLDDVIA 405 Query 411 HMMEKPESVQHWHTDEDGLDDLLAELKKKPGIHAVHMAGGNKAEIAPTISESG 463 + +PE+VQHW+ D+ GLDDLL L KKPGIHAVH++ G K PT++ G Sbjct 406 KLQRQPEAVQHWNVDKAGLDDLLDRLSKKPGIHAVHVSSGGK----PTVTLPG 454 >gi|212595990|gb|ACJ35542.1| PPE17 [Mycobacterium avium subsp. avium] Length=461 Score = 302 bits (773), Expect = 8e-80, Method: Compositional matrix adjust. Identities = 231/473 (49%), Positives = 301/473 (64%), Gaps = 27/473 (5%) Query 1 MDFGVLPPEINSGRMYAGPGSGPMLAAAAAWDGLATELQSTAADYGSVISVLTG-VWSGQ 59 M+F + PPEI S ++Y GPG+GPML AAAAWD LA ELQS A+ Y +V++ L W+G Sbjct 1 MNFALQPPEITSAQLYTGPGAGPMLTAAAAWDALAAELQSAASSYAAVVNGLADEAWAGP 60 Query 60 SSGTMAAAAAPYVAWMSATAALAREAAAQASAAAAAYEAAFAATVPPPVVAANRAELAVL 119 S+ MAAAAAPYVAW+SA +A AR AA QA+AAA+ YE+AFAA VPP +A NRA L +L Sbjct 61 SAAAMAAAAAPYVAWLSAASAQARTAAEQATAAASVYESAFAAVVPPAEIATNRARLTML 120 Query 120 AATNIFGQNTGAIAAAEARYAEMWAQDAAAMYGYAGSSSVATQVTPFAAPPPTTNAAGLA 179 A+N+FGQN+ AIAAAEA Y +MWAQDAAAM+GYA +S+ AT++ PF PP TTN AG+A Sbjct 121 LASNVFGQNSAAIAAAEAEYGQMWAQDAAAMFGYASASAAATRLAPFTEPPKTTNDAGIA 180 Query 180 TQGVAVAQAVGASAGNARS--------LVSEVLEFLATAGTNYNKTVASLMNAVTGVPYA 231 Q A+ +A G AG A + ++S++LE L A Y ++N +TG P A Sbjct 181 AQAAALGEATGLGAGTAAADATAPPSGIISQLLEALGNASRGYMDFWDQVLNTLTGSPLA 240 Query 232 SSVYNSMLGLGFAESKMVLPANDTVISTIFGMVQFQKFFN-PVTPFNPDLIPKSALGAGL 290 + + + G+ + AND++ M +F+ F+ PV + IPKSALGAGL Sbjct 241 GTTWQNTFGILADIGRFSTVANDSMSPINLAMTEFKMFYKLPVEGLD---IPKSALGAGL 297 Query 291 GLRSAISSGLGSTAPAISAGASQAGSVGGMSVPPSWAAATPAIRTVAAVFSSTGLQAVPA 350 GLRSA G G T A+S G +A SVG +SVPP+WA+ATPAIR +A+ + A Sbjct 298 GLRSA---GAGLTG-AVSVGVGEANSVGRLSVPPTWASATPAIR-LASGLAPATAAAAAP 352 Query 351 AAISEGSLLSQMALASVAGGALGGAAARATGGFLGGGRVTAVKKSLKDSDSPDKLRRVVA 410 AA LL QMAL SV GGALG A G G RV A K + P KL V+A Sbjct 353 AAGIPAGLLGQMALGSVTGGALGAVAPHVGSGR--GVRVRAAKPA-----EPVKLDDVIA 405 Query 411 HMMEKPESVQHWHTDEDGLDDLLAELKKKPGIHAVHMAGGNKAEIAPTISESG 463 + +PE+VQHW+ D+ GLDDLL L KKPGIHAVH++ G K + T+ ++G Sbjct 406 KLQRQPEAVQHWNVDKAGLDDLLDRLSKKPGIHAVHVSSGGKPTV--TLPDAG 456 >gi|296164792|ref|ZP_06847352.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295899846|gb|EFG79292.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=469 Score = 300 bits (767), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 221/484 (46%), Positives = 294/484 (61%), Gaps = 36/484 (7%) Query 1 MDFGVLPPEINSGRMYAGPGSGPMLAAAAAWDGLATELQSTAADYGSVISVLT-GVWSGQ 59 M +G PPE NSGRMY+GPG ++AAA AW+ LAT+LQ+TA+ Y SV+S LT G W G Sbjct 1 MFYGAFPPEFNSGRMYSGPGPESLVAAATAWENLATDLQATASAYSSVVSSLTTGPWVGP 60 Query 60 SSGTMAAAAAPYVAWMSATAALAREAAAQASAAAAAYEAAFAATVPPPVVAANRAELAVL 119 SS MAAAAAPYVAW+ TAA A + AAQA+ A AAYE AFAA VPPPV+AANRA LA L Sbjct 61 SSMAMAAAAAPYVAWIQQTAAQAAQTAAQATQAVAAYETAFAAHVPPPVIAANRALLAQL 120 Query 120 AATNIFGQNTGAIAAAEARYAEMWAQDAAAMYGYAGSSSVATQ-VTPFAAPPPTTNAAGL 178 ATN+FGQNT AIAA EA Y +MWAQDA AM Y SS+ A+ + F+ P TTN + Sbjct 121 VATNLFGQNTAAIAANEAEYGDMWAQDATAMDTYFASSATASNSLQEFSPAPQTTNQSAG 180 Query 179 ATQGVAVAQAVGASAGNARSLVSEV-------------LEFLATAGTNYNKTVASLMNAV 225 Q A+ Q +AG ++ L +LA GT Y +L+N + Sbjct 181 PMQAAALTQTANTAAGTVTKNLAGTANLAGTTTGATGPLAWLANLGTAYQTFWTNLLNTI 240 Query 226 T-GVPYASSVYNSM-LGLGFAESKMVLPANDTVISTIFGMVQFQKFFNPVTPFNPDLIPK 283 G + +++YN++ + LG + ND + F + Q+ KF P+ +PK Sbjct 241 PGGANFYTAMYNAVKVPLGLTTT-----FNDIGLLINFPVSQWLKFAPPIA---YGALPK 292 Query 284 SALGAGLGLRSAISSGLGSTAPAISAGASQAGSVGGMSVPPSWAAATPAIRTVAAVFSST 343 A S G A + +AG ++ VG ++VPPSWA+ATPAIRTVAA S+ Sbjct 293 DA-LGAGLGALGFSRGTLFDALSPTAGFARGTLVGSLTVPPSWASATPAIRTVAAALSAA 351 Query 344 GLQAVPAAAISEGSLLSQMALASVAGGALGGAAARATGG--FLGGGRVTAVK--KSLKDS 399 G +AVPAAA+ EGSL S M +A + G ALG +GG +G G +K K LKD Sbjct 352 GPEAVPAAALGEGSLFSSMGMAGMLGSALG------SGGPTVVGAGVRNRMKPIKDLKDK 405 Query 400 DSPDKLRRVVAHMMEKPESVQHWHTDEDGLDDLLAELKKKPGIHAVHMAGGNKAEIAPTI 459 SP++L+R+VA + E+PE+VQH D++GLD LL +L KKPGIHAVH+ G+K+++ P Sbjct 406 QSPEQLKRLVAQISEQPETVQHHSVDQEGLDALLEQLAKKPGIHAVHLKKGDKSKVLPAD 465 Query 460 SESG 463 ++ G Sbjct 466 AQIG 469 >gi|254775385|ref|ZP_05216901.1| hypothetical protein MaviaA2_12051 [Mycobacterium avium subsp. avium ATCC 25291] gi|212596014|gb|ACJ35544.1| PPE19 [Mycobacterium avium subsp. avium] Length=467 Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 234/479 (49%), Positives = 286/479 (60%), Gaps = 28/479 (5%) Query 1 MDFGVLPPEINSGRMYAGPGSGPMLAAAAAWDGLATELQSTAADYGSVISVLT-GVWSGQ 59 M +G PPE NSGRMY+GPG+G +AAA AW LA ELQS AA Y SV+S LT G W G Sbjct 1 MFYGAFPPEFNSGRMYSGPGAGSFVAAATAWQNLAAELQSAAASYSSVLSGLTAGPWVGP 60 Query 60 SSGTMAAAAAPYVAWMSATAALAREAAAQASAAAAAYEAAFAATVPPPVVAANRAELAVL 119 SS MA+AAAPYVAWM TAA A E AAQA+AAA AYEAAFAA VPP V+A NRA LA L Sbjct 61 SSLAMASAAAPYVAWMQQTAAQAAETAAQATAAATAYEAAFAAHVPPAVIAENRALLAQL 120 Query 120 AATNIFGQNTGAIAAAEARYAEMWAQDAAAMYGY-AGSSSVATQVTPFAAPPPTTNAAGL 178 ATNIFGQNT AIAA EA+Y E WAQDA AM Y A S++ A ++T F P TTN A Sbjct 121 VATNIFGQNTAAIAANEAQYGEFWAQDATAMDTYFAASATAANKLTEFGPAPKTTNEAAQ 180 Query 179 ATQGVAVAQAVGASAGNARSL----------VSEVLEFLATAGTNYNKTVASLMNAVTGV 228 Q AV+ A A N S A Y + +L N V G Sbjct 181 PMQAAAVSSAASTPAANVAQTAASAASTTLPYSGPFSGPANLAYLYQTFMTNLFNTVPG- 239 Query 229 PYASSVYNSMLGLGFAESKMVLPANDTVISTIFGMVQFQKFFNPVTPFNPDLIPKSALGA 288 +S Y SM + ND + F + Q+ KF P +PK ALGA Sbjct 240 --GASFYTSMYNAVKVPLGLTTQFNDVGLLVNFPLSQWLKF---APPIGYGALPKDALGA 294 Query 289 GLGLRSAISSGLGSTAPAIS--AGASQAGS-VGGMSVPPSWAAATPAIRTVAAVFSSTGL 345 A+ G G+ AIS AG AG+ VG +S+PPSWA ATP+IRTVAA S+ G Sbjct 295 ---GLGALGFGRGTLYSAISPVAGMGNAGTLVGKLSIPPSWATATPSIRTVAAALSAAGT 351 Query 346 QAVPAAAISEGSLLSQMALASVAGGALG-GAAARATGGFLGGGRVTAVKKSLKDSDSPDK 404 +AVPAAA+ EGSL S M LA + G A+G G GG R+TA+ K LKD SP++ Sbjct 352 EAVPAAALGEGSLFSSMGLAGMLGSAVGSGGPTMVRGGVR--NRMTAI-KDLKDKQSPEQ 408 Query 405 LRRVVAHMMEKPESVQHWHTDEDGLDDLLAELKKKPGIHAVHMAGGNKAEIAPTISESG 463 L+R+VA + E+PESVQH + D++ LD LL +L KKPGIHAVH+ G+K+++ P ++ G Sbjct 409 LKRLVAQISEQPESVQHHNVDQENLDALLEQLAKKPGIHAVHLKKGDKSKVLPADAQLG 467 >gi|118462708|ref|YP_882091.1| PPE family protein [Mycobacterium avium 104] gi|118163995|gb|ABK64892.1| ppe family protein [Mycobacterium avium 104] Length=461 Score = 294 bits (752), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 232/473 (50%), Positives = 305/473 (65%), Gaps = 27/473 (5%) Query 1 MDFGVLPPEINSGRMYAGPGSGPMLAAAAAWDGLATELQSTAADYGSVISVLTG-VWSGQ 59 M+F + PPEI S ++Y GPG+GPML AAAAWD LA ELQS A+ Y +V++ L W+G Sbjct 1 MNFALQPPEITSAQLYTGPGAGPMLTAAAAWDALAAELQSAASSYAAVVNGLADEAWAGP 60 Query 60 SSGTMAAAAAPYVAWMSATAALAREAAAQASAAAAAYEAAFAATVPPPVVAANRAELAVL 119 S+ MAAAAAPYVAW+SAT+A AR AA QA+AAA+A+E+AFAA VPP +A NRA LA+L Sbjct 61 SAAAMAAAAAPYVAWLSATSAQARTAAEQATAAASAFESAFAAVVPPAEIATNRARLAML 120 Query 120 AATNIFGQNTGAIAAAEARYAEMWAQDAAAMYGYAGSSSVATQVTPFAAPPPTTNAAGLA 179 +A+N+FGQN+ AIAAAEA Y +MWAQDAAAM+GYA +S+ AT++ PF PP TTN AG+A Sbjct 121 SASNVFGQNSAAIAAAEAEYGQMWAQDAAAMFGYASASAAATRLAPFTEPPKTTNDAGIA 180 Query 180 TQGVAVAQAVGASAGNARS--------LVSEVLEFLATAGTNYNKTVASLMNAVTGVPYA 231 Q A+ +A G AG A + ++S++LE L A Y ++N +TG P A Sbjct 181 AQAAALGEATGRGAGTAAADATAPPSGIISQLLEALGNASRGYMDFWDQVLNTLTGSPLA 240 Query 232 SSVYNSMLGLGFAESKMVLPANDTVISTIFGMVQFQKFFN-PVTPFNPDLIPKSALGAGL 290 + + + G+ + AND++ M +F+ F+ PV + IPKSALGAGL Sbjct 241 GTTWQNTFGILADIGRFSTVANDSMSPINLAMTEFKMFYKLPVEGLD---IPKSALGAGL 297 Query 291 GLRSAISSGLGSTAPAISAGASQAGSVGGMSVPPSWAAATPAIRTVAAVFSSTGLQAVPA 350 GLRSA G G T A+S G +A +VG +SVPP+WA+ATPAIR +A+ + A Sbjct 298 GLRSA---GAGLTG-AVSVGVGEANTVGRLSVPPTWASATPAIR-LASGLAPATAAAAAP 352 Query 351 AAISEGSLLSQMALASVAGGALGGAAARATGGFLGGGRVTAVKKSLKDSDSPDKLRRVVA 410 AA LL QMAL SV GGALG A G G RV A K + P KL V+A Sbjct 353 AAGIPAGLLGQMALGSVTGGALGAVAPHVGSGR--GVRVRAAKPA-----EPVKLDDVIA 405 Query 411 HMMEKPESVQHWHTDEDGLDDLLAELKKKPGIHAVHMAGGNKAEIAPTISESG 463 + +PE+VQHW+ D+ GLDDLL L KKPGIHAVH++ G K + T+ ++G Sbjct 406 KLQRQPEAVQHWNVDKAGLDDLLDRLSKKPGIHAVHVSSGGKPTV--TLPDAG 456 >gi|212596776|gb|ACJ35605.1| PPE44 [Mycobacterium intracellulare ATCC 13950] Length=460 Score = 291 bits (744), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 230/477 (49%), Positives = 290/477 (61%), Gaps = 45/477 (9%) Query 1 MDFGVLPPEINSGRMYAGPGSGPMLAAAAAWDGLATELQSTAADYGSVISVLTGVWSGQS 60 MDFG PPEINSGRMYAG G+G MLAAA+AWDGLA +L S A Y SVIS LT W G S Sbjct 3 MDFGAFPPEINSGRMYAGEGAGSMLAAASAWDGLAAQLHSAATSYESVISNLTSGWQGPS 62 Query 61 SGTMAAAAAPYVAWMSATAALAREAAAQASAAAAAYEAAFAATVPPPVVAANRAELAVLA 120 S TMA AAAPY AWMS TAA A +AA++A AAAAAYEAAF ATVPP +A NR LA L Sbjct 63 SLTMAGAAAPYAAWMSTTAAQAEQAASRARAAAAAYEAAFTATVPPVAIAENRGRLASLV 122 Query 121 ATNIFGQNTGAIAAAEARYAEMWAQDAAAMYGYAGSSSVATQVTPFAAPPPTTNAAGLAT 180 ATN+ GQNT AIAA EA YA+MWAQDAAAMYGYAGSS++A Q+ PF APP TTN AG A Sbjct 123 ATNLLGQNTAAIAATEAEYAQMWAQDAAAMYGYAGSSAIAAQLEPFNAPPQTTNPAGGAG 182 Query 181 QGVAVAQAVGASAGNARSLVSEVLEFLATAGTNY----------NKTVASLMNAVTGVPY 230 Q AVAQA G + NA+S +++++ ++ ++A+ +N + P Sbjct 183 QSGAVAQAAGTAPANAQSALAQLMSSTPRTLQSFASPSALPAADPSSLATWLNNLNSTPL 242 Query 231 ASSVYNSMLGLGFAESKMVLPANDTVISTIFGMVQFQKFFNPVTPFNPDLIPKSALGAGL 290 A N + F +K + P NDT++S G+V + + + Sbjct 243 AKIAAN----IEFV-TKGIRPVNDTLLSLSLGLVATARTWG---------------DTAV 282 Query 291 GLRSAISSGLGSTAP--------AISAGASQAGSVGGMSVPPSWAAATPAIRTVAAVFSS 342 L + + LGS+ P A++AG AG G +SVPPSWA A+PA++ A V Sbjct 283 ELEGPLFASLGSSTPAAGAVGASAVTAGLGNAGLAGALSVPPSWAVASPAVKLAATVLEY 342 Query 343 TGLQAVPAAAISEGSLLSQMALASVAGGALGGAAARATGG--FLGGGRVTAVKKSLKDSD 400 T A P A G+ L QM LA +AGGALGGA RA G GR + S D Sbjct 343 TSAGAAPTVAAGAGA-LGQMGLAGLAGGALGGAVPRAVAASPTRGLGR----RSSDNDDK 397 Query 401 SPDKLRRVVAHMMEKPESVQHWHTDEDGLDDLLAELKKKPGIHAVHMAGGNKAEIAP 457 +PDKL+ V+A + E PESVQHWHTD+ L+ LL +L KKPG+HAVH++ +K++ P Sbjct 398 TPDKLKTVLAELQEAPESVQHWHTDKAHLESLLDQLSKKPGVHAVHLSSADKSKATP 454 >gi|254823261|ref|ZP_05228262.1| hypothetical protein MintA_25249 [Mycobacterium intracellulare ATCC 13950] Length=467 Score = 280 bits (717), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 229/478 (48%), Positives = 286/478 (60%), Gaps = 26/478 (5%) Query 1 MDFGVLPPEINSGRMYAGPGSGPMLAAAAAWDGLATELQSTAADYGSVISVLT-GVWSGQ 59 M +G PPE NSGRMY+GPG+G ++AAA AW LATELQSTA Y + IS LT G W+G Sbjct 1 MFYGAFPPEFNSGRMYSGPGAGSLVAAATAWQSLATELQSTATSYAATISSLTAGPWAGP 60 Query 60 SSGTMAAAAAPYVAWMSATAALAREAAAQASAAAAAYEAAFAATVPPPVVAANRAELAVL 119 SS MA+AAAPYVAWM TAA A ++A QA+ AAAAYE AFAA VPP V+A NRA LA L Sbjct 61 SSLAMASAAAPYVAWMQQTAAAAAQSATQATEAAAAYETAFAAHVPPAVIAENRALLAQL 120 Query 120 AATNIFGQNTGAIAAAEARYAEMWAQDAAAMYGYAGSSSVAT-QVTPFAAPPPTTNAAGL 178 ATN+FGQNT AIAA EA+Y E WAQDA AM Y SS+ A+ ++T F P TTNAA Sbjct 121 VATNLFGQNTSAIAANEAQYGEFWAQDATAMDTYFASSATASNKLTEFGPAPQTTNAAAE 180 Query 179 ATQGVAVAQAVGASAGNARSL----------VSEVLEFLATAGTNYNKTVASLMNAVTGV 228 Q AV A A N + S A Y + +L N V G Sbjct 181 PMQAAAVTSAASTPAANVANAAATAATTTLPYSGPFSGAANLAYLYQTFMTNLFNTVPG- 239 Query 229 PYASSVYNSMLGLGFAESKMVLPANDTVISTIFGMVQFQKFFNPVTPFNPDLIPKSALGA 288 +S Y +M + ND + F + Q+ KF P+ +PK ALGA Sbjct 240 --GASFYTAMYNAVKVPLGLTTQFNDVGLLVNFPLSQWLKFAPPIA---YGALPKDALGA 294 Query 289 GLGLRSAISSGLGSTAPAIS--AGASQAGS-VGGMSVPPSWAAATPAIRTVAAVFSSTGL 345 G A+ G G+ AI+ AG AG+ VG +S+PPSWA ATP++RTVAA S+ G Sbjct 295 G---LGALGFGRGTLYSAINPIAGMGNAGTLVGKLSIPPSWATATPSVRTVAAALSAAGT 351 Query 346 QAVPAAAISEGSLLSQMALASVAGGALGGAAARATGGFLGGGRVTAVKKSLKDSDSPDKL 405 +AVPAAA+ EGSL S M LA + G LG A G G A K LKD SP++L Sbjct 352 EAVPAAALGEGSLFSSMGLAGMLGSGLGSGAPTVVRG--GVRNRMAAIKDLKDKQSPEQL 409 Query 406 RRVVAHMMEKPESVQHWHTDEDGLDDLLAELKKKPGIHAVHMAGGNKAEIAPTISESG 463 +R+VA + EKPESVQH + D++ LD LL +L KKPGIHAVH+ G+K+++ PT ++ G Sbjct 410 KRLVAQISEKPESVQHHNVDQENLDALLEQLAKKPGIHAVHLKKGDKSKVLPTDAQLG 467 >gi|212596561|gb|ACJ35588.1| PPE19 [Mycobacterium intracellulare ATCC 13950] Length=475 Score = 280 bits (717), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 229/478 (48%), Positives = 286/478 (60%), Gaps = 26/478 (5%) Query 1 MDFGVLPPEINSGRMYAGPGSGPMLAAAAAWDGLATELQSTAADYGSVISVLT-GVWSGQ 59 M +G PPE NSGRMY+GPG+G ++AAA AW LATELQSTA Y + IS LT G W+G Sbjct 9 MFYGAFPPEFNSGRMYSGPGAGSLVAAATAWQSLATELQSTATSYAATISSLTAGPWAGP 68 Query 60 SSGTMAAAAAPYVAWMSATAALAREAAAQASAAAAAYEAAFAATVPPPVVAANRAELAVL 119 SS MA+AAAPYVAWM TAA A ++A QA+ AAAAYE AFAA VPP V+A NRA LA L Sbjct 69 SSLAMASAAAPYVAWMQQTAAAAAQSATQATEAAAAYETAFAAHVPPAVIAENRALLAQL 128 Query 120 AATNIFGQNTGAIAAAEARYAEMWAQDAAAMYGYAGSSSVAT-QVTPFAAPPPTTNAAGL 178 ATN+FGQNT AIAA EA+Y E WAQDA AM Y SS+ A+ ++T F P TTNAA Sbjct 129 VATNLFGQNTSAIAANEAQYGEFWAQDATAMDTYFASSATASNKLTEFGPAPQTTNAAAE 188 Query 179 ATQGVAVAQAVGASAGNARSL----------VSEVLEFLATAGTNYNKTVASLMNAVTGV 228 Q AV A A N + S A Y + +L N V G Sbjct 189 PMQAAAVTSAASTPAANVANAAATAATTTLPYSGPFSGAANLAYLYQTFMTNLFNTVPG- 247 Query 229 PYASSVYNSMLGLGFAESKMVLPANDTVISTIFGMVQFQKFFNPVTPFNPDLIPKSALGA 288 +S Y +M + ND + F + Q+ KF P+ +PK ALGA Sbjct 248 --GASFYTAMYNAVKVPLGLTTQFNDVGLLVNFPLSQWLKFAPPIA---YGALPKDALGA 302 Query 289 GLGLRSAISSGLGSTAPAIS--AGASQAGS-VGGMSVPPSWAAATPAIRTVAAVFSSTGL 345 G A+ G G+ AI+ AG AG+ VG +S+PPSWA ATP++RTVAA S+ G Sbjct 303 G---LGALGFGRGTLYSAINPIAGMGNAGTLVGKLSIPPSWATATPSVRTVAAALSAAGT 359 Query 346 QAVPAAAISEGSLLSQMALASVAGGALGGAAARATGGFLGGGRVTAVKKSLKDSDSPDKL 405 +AVPAAA+ EGSL S M LA + G LG A G G A K LKD SP++L Sbjct 360 EAVPAAALGEGSLFSSMGLAGMLGSGLGSGAPTVVRG--GVRNRMAAIKDLKDKQSPEQL 417 Query 406 RRVVAHMMEKPESVQHWHTDEDGLDDLLAELKKKPGIHAVHMAGGNKAEIAPTISESG 463 +R+VA + EKPESVQH + D++ LD LL +L KKPGIHAVH+ G+K+++ PT ++ G Sbjct 418 KRLVAQISEKPESVQHHNVDQENLDALLEQLAKKPGIHAVHLKKGDKSKVLPTDAQLG 475 >gi|289745759|ref|ZP_06505137.1| PPE family protein [Mycobacterium tuberculosis 02_1987] gi|289686287|gb|EFD53775.1| PPE family protein [Mycobacterium tuberculosis 02_1987] Length=436 Score = 278 bits (710), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 201/425 (48%), Positives = 259/425 (61%), Gaps = 46/425 (10%) Query 56 WSGQSSGTMAAAAAPYVAWMSATAALAREAAAQASAAAAAYEAAFAATVPPPVVAANRAE 115 W G SS MAAAAAPYV WMS T+A A+ AA QA AA AYE AFAA VPPP +AANR++ Sbjct 25 WLGPSSAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYENAFAAVVPPPQIAANRSQ 84 Query 116 LAVLAATNIFGQNTGAIAAAEARYAEMWAQDAAAMYGYAGSSSVATQVTPFAAPPPTTNA 175 L L ATNIFGQNT AIAA EA Y EMWAQD AM+GYA SS+ A+++TPF APP TTN Sbjct 85 LISLVATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATASRLTPFTAPPQTTNP 144 Query 176 AG-------------LATQGVAVAQAVGASAGN-ARSLVSEVLEFLATAGTNYNKTVASL 221 +G LA+ AV A+ ++A ++ +L+ LAT T Y + + L Sbjct 145 SGLAGQAAATGQATALASGTNAVTTALSSAAAQFPFDIIPTLLQGLATLSTQYTQLMGQL 204 Query 222 MNAVTGVPYASSVYNSMLGLGFAESKMVLPANDTVISTIFGMVQFQKFFNPVTPFNPDLI 281 +NA+ G P ++ Y ++ +K AND + + GM +F+ F+ P P P+ I Sbjct 205 INAIFG-PTGATTYQNLFVTAANVTKFSTWANDAMSAPNLGMTEFKVFWQP--PPAPE-I 260 Query 282 PKSALGAGLGLRSAISSGLGSTAPAISAGASQAGSVGGMSVPPSWAAATPAIRTVAAVFS 341 PKS+LGAGLGLRS +S+GL A A SAG QA VG +SVPPSWA+ATPA+R VA Sbjct 261 PKSSLGAGLGLRSGLSAGL---AHAASAGLGQANLVGDLSVPPSWASATPAVRLVANTLP 317 Query 342 STGLQAVPAAAISEGSLLSQMALASVAGGAL----------GGAAARATGGFLGGGRVTA 391 +T L A PA I +LL QMAL S+ GGAL GA ARA GG Sbjct 318 ATSLAAAPATQI-PANLLGQMALGSMTGGALGAAAPAIYTGSGARARANGG--------- 367 Query 392 VKKSLKDSDSPDKLRRVVAHMMEKPESVQHWHTDEDGLDDLLAELKKKPGIHAVHMAGGN 451 S P KL V+A + ++P++V+HW+ D+ LD LL L K+PGIHAVH++ G+ Sbjct 368 -----TPSAEPVKLEAVIAQLQKQPDAVRHWNVDKADLDGLLDRLSKQPGIHAVHVSNGD 422 Query 452 KAEIA 456 K ++A Sbjct 423 KPKVA 427 >gi|212596535|gb|ACJ35586.1| PPE17 [Mycobacterium intracellulare ATCC 13950] Length=467 Score = 275 bits (702), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 233/466 (50%), Positives = 303/466 (66%), Gaps = 23/466 (4%) Query 1 MDFGVLPPEINSGRMYAGPGSGPMLAAAAAWDGLATELQSTAADYGSVISVLTG-VWSGQ 59 M+F V PPEI SG+MY GPG+GPMLAAAAAWD LA ELQSTA+ YG+++ L W+G Sbjct 1 MNFAVQPPEITSGQMYTGPGAGPMLAAAAAWDALAAELQSTASSYGAIVEGLANEAWAGP 60 Query 60 SSGTMAAAAAPYVAWMSATAALAREAAAQASAAAAAYEAAFAATVPPPVVAANRAELAVL 119 S+ MAAAAA YVAWMS T+A A+ AA QA+AAA AYE+AFAA VPP +AANR LA L Sbjct 61 SAVAMAAAAAQYVAWMSETSAQAKTAAVQATAAAGAYESAFAAVVPPTEIAANRVRLATL 120 Query 120 AATNIFGQNTGAIAAAEARYAEMWAQDAAAMYGYAGSSSVATQVTPFAAPPPTTNAAGLA 179 ATN FGQNT AIAA EA YAEMWAQDAAAMY YAG+S+ AT++ PF PP TTN G+A Sbjct 121 LATNAFGQNTAAIAATEAEYAEMWAQDAAAMYAYAGASAAATRLAPFTEPPQTTNETGIA 180 Query 180 TQGVAVAQAVGASAGNA---------RSLVSEVLEFLATAGTNYNKTVASLMNAVTGVPY 230 Q A+ +A G ++G A + S++LE + A Y + ++N +TG P Sbjct 181 AQAAALGEATGVASGTAAATDAVAPPSGIFSDLLEAIGNASRGYMEFWDQVLNTLTGSPL 240 Query 231 ASSVYNSMLGLGFAESKMVLPANDTVISTIFGMVQFQKFFN-PVTPFNPDLIPKSALGAG 289 A + + + G+ + AND++ M +F+ F+N PV + IPKSALGAG Sbjct 241 AGTTWQNTFGILADIGRFSTVANDSMSPINLAMTEFKMFYNLPVEGLD---IPKSALGAG 297 Query 290 LGLRSAISSGLGSTAPAISAGASQAGSVGGMSVPPSWAAATPAIRTVAAVFSSTGLQAVP 349 LG+RSA G G T+ A+SAG +A VG +SVPP+WA+ATPAIR +A+ + + A Sbjct 298 LGMRSA---GAGLTS-AVSAGMGEANVVGKLSVPPAWASATPAIR-LASGLAPSAGIAAA 352 Query 350 AAAISEGSLLSQMALASVAGGALGGAAARATGGFLGGGRVTAVKKSLKDSDSPDKLRRVV 409 AA GSLL QMAL S+ GGALG + G R K+ + P KL V+ Sbjct 353 PAAGIPGSLLGQMALGSLTGGALGAVTPQVVSGGGVRARAGGATKAAE----PVKLDDVI 408 Query 410 AHMMEKPESVQHWHTDEDGLDDLLAELKKKPGIHAVHMAGGNKAEI 455 A + ++PE+VQHW+ D+ GLDDLL +L KKPGIHAVH++ G+K ++ Sbjct 409 AKLQKQPEAVQHWNVDKAGLDDLLDQLSKKPGIHAVHVSSGDKPKV 454 >gi|41407617|ref|NP_960453.1| hypothetical protein MAP1519 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395970|gb|AAS03836.1| hypothetical protein MAP_1519 [Mycobacterium avium subsp. paratuberculosis K-10] gi|336457568|gb|EGO36573.1| PPE-repeat containing protein [Mycobacterium avium subsp. paratuberculosis S397] Length=467 Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 230/479 (49%), Positives = 284/479 (60%), Gaps = 28/479 (5%) Query 1 MDFGVLPPEINSGRMYAGPGSGPMLAAAAAWDGLATELQSTAADYGSVISVLT-GVWSGQ 59 M +G PPE NSGRMY+GPG+G +AAA AW LA ELQS AA Y +V+S LT G W G Sbjct 1 MFYGAFPPEFNSGRMYSGPGAGSFVAAATAWQNLAAELQSAAASYSTVLSGLTAGPWVGP 60 Query 60 SSGTMAAAAAPYVAWMSATAALAREAAAQASAAAAAYEAAFAATVPPPVVAANRAELAVL 119 SS MA+AAAPYVAWM TAA A E AAQA+AAA AYE AFAA VPP V+ NRA LA L Sbjct 61 SSLAMASAAAPYVAWMQQTAAQAAETAAQATAAATAYETAFAAHVPPAVITENRALLAQL 120 Query 120 AATNIFGQNTGAIAAAEARYAEMWAQDAAAMYGY-AGSSSVATQVTPFAAPPPTTNAAGL 178 ATNIFGQNT AIAA EA+Y E WAQDA AM Y A S++ A ++T F P TTN A Sbjct 121 VATNIFGQNTAAIAANEAQYGEFWAQDATAMDTYFAASATAANKLTEFGPAPKTTNEAAQ 180 Query 179 ATQGVAVAQAVGASAGNARSLVSEVLEFL----------ATAGTNYNKTVASLMNAVTGV 228 Q AV+ A A N + A Y + +L N V G Sbjct 181 PMQAAAVSSAASTPAANVAQTAASAASTTLPYSGPFSGPANLAYLYQTFMTNLFNTVPG- 239 Query 229 PYASSVYNSMLGLGFAESKMVLPANDTVISTIFGMVQFQKFFNPVTPFNPDLIPKSALGA 288 +S Y SM + ND + F + Q+ KF P +PK ALGA Sbjct 240 --GASFYTSMYNAVKVPLGLTTQFNDVGLLVNFPLSQWLKF---APPIGYGALPKDALGA 294 Query 289 GLGLRSAISSGLGSTAPAIS--AGASQAGS-VGGMSVPPSWAAATPAIRTVAAVFSSTGL 345 A+ G G+ AIS AG AG+ VG +S+PPSWA ATP+IRTVAA S+ G Sbjct 295 ---GLGALGFGRGTLYSAISPVAGMGNAGTLVGKLSIPPSWATATPSIRTVAAALSAAGA 351 Query 346 QAVPAAAISEGSLLSQMALASVAGGALG-GAAARATGGFLGGGRVTAVKKSLKDSDSPDK 404 +AVPAAA+ EGSL S M LA + G A+G G GG R+TA+ K LKD SP++ Sbjct 352 EAVPAAALGEGSLFSSMGLAGMLGSAVGSGGPTMVRGGVR--NRMTAI-KDLKDKQSPEQ 408 Query 405 LRRVVAHMMEKPESVQHWHTDEDGLDDLLAELKKKPGIHAVHMAGGNKAEIAPTISESG 463 L+R+VA + E+PESVQH + D++ LD LL +L KKPGIHAVH+ G+K+++ P ++ G Sbjct 409 LKRLVAQISEQPESVQHHNVDQENLDALLEQLAKKPGIHAVHLKKGDKSKVLPADAQLG 467 >gi|118465656|ref|YP_882095.1| PPE family protein [Mycobacterium avium 104] gi|118166943|gb|ABK67840.1| PPE family protein [Mycobacterium avium 104] Length=467 Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 235/483 (49%), Positives = 291/483 (61%), Gaps = 36/483 (7%) Query 1 MDFGVLPPEINSGRMYAGPGSGPMLAAAAAWDGLATELQSTAADYGSVISVLT-GVWSGQ 59 M +G PPE NSGRMY+GPG+G +AAA AW LA ELQS AA Y SV+S LT G W G Sbjct 1 MFYGAFPPEFNSGRMYSGPGAGSFVAAATAWQNLAAELQSAAASYSSVLSGLTAGPWVGP 60 Query 60 SSGTMAAAAAPYVAWMSATAALAREAAAQASAAAAAYEAAFAATVPPPVVAANRAELAVL 119 SS MA+AAAPYVAWM TAA A E AAQA+AAA AYE AFAA VPP V+A NRA LA L Sbjct 61 SSLAMASAAAPYVAWMQQTAAQAAETAAQATAAATAYETAFAAHVPPAVIAENRALLAQL 120 Query 120 AATNIFGQNTGAIAAAEARYAEMWAQDAAAMYGY-AGSSSVATQVTPFAAPPPTTNAAGL 178 ATNIFGQNT AIAA EA+Y E WAQDA AM Y A S++ A ++T F P TTN A Sbjct 121 VATNIFGQNTAAIAANEAQYGEFWAQDATAMDTYFAASATAANKLTEFGPAPKTTNEAAQ 180 Query 179 ATQGVAVAQAVGASAGNARSL----------VSEVLEFLATAGTNYNKTVASLMNAVT-G 227 Q AV+ A A N S A Y + +L N V G Sbjct 181 PMQAAAVSSAASTPAANVAQTAASAASTTLPYSGPFSGPANLAYLYQTFMTNLFNTVPGG 240 Query 228 VPYASSVYNSM---LGLGFAESKMVLPANDTVISTIFGMVQFQKFFNPVTPFNPDLIPKS 284 + +S+YN++ LGL + + L N F + Q+ KF P +PK Sbjct 241 ASFYTSMYNAVKVPLGLTTQFNGVGLLVN-------FPLSQWLKF---APPIGYGALPKD 290 Query 285 ALGAGLGLRSAISSGLGSTAPAIS--AGASQAGS-VGGMSVPPSWAAATPAIRTVAAVFS 341 ALGA A+ G G+ AIS AG AG+ VG +S+PPSWA ATP+IRTVAA S Sbjct 291 ALGA---GLGALGFGRGTLYSAISPVAGMGNAGTLVGKLSIPPSWATATPSIRTVAAALS 347 Query 342 STGLQAVPAAAISEGSLLSQMALASVAGGALG-GAAARATGGFLGGGRVTAVKKSLKDSD 400 + G +AVPAAA+ EGSL S M LA + G A+G G GG R+TA+ K LKD Sbjct 348 AAGAEAVPAAALGEGSLFSSMGLAGMLGSAVGSGGPTMVRGGVR--NRMTAI-KDLKDKQ 404 Query 401 SPDKLRRVVAHMMEKPESVQHWHTDEDGLDDLLAELKKKPGIHAVHMAGGNKAEIAPTIS 460 SP++L+R+VA + E+PESVQH + D++ LD LL +L KKPGIHAVH+ G+K+++ P + Sbjct 405 SPEQLKRLVAQISEQPESVQHHNVDQENLDTLLEQLAKKPGIHAVHLKKGDKSKVLPADA 464 Query 461 ESG 463 + G Sbjct 465 QLG 467 >gi|254775380|ref|ZP_05216896.1| hypothetical protein MaviaA2_12026 [Mycobacterium avium subsp. avium ATCC 25291] Length=375 Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 180/384 (47%), Positives = 235/384 (62%), Gaps = 28/384 (7%) Query 86 AAQASAAAAAYEAAFAATVPPPVVAANRAELAVLAATNIFGQNTGAIAAAEARYAEMWAQ 145 A QA+AAA+ YE+AFAA VPP +A NRA L +L A+N+FGQN+ AIAAAEA Y +MWAQ Sbjct 1 AEQATAAASVYESAFAAVVPPAEIATNRARLTMLLASNVFGQNSAAIAAAEAEYGQMWAQ 60 Query 146 DAAAMYGYAGSSSVATQVTPFAAPPPTTNAAGLATQGVAVAQAVGASAGNARS------- 198 DAAAM+GYA +S+ AT++ PF PP TTN AG+A Q A+ +A G AG A + Sbjct 61 DAAAMFGYASASAAATRLAPFTEPPKTTNDAGIAAQAAALGEATGLGAGTAAADATAPPS 120 Query 199 -LVSEVLEFLATAGTNYNKTVASLMNAVTGVPYASSVYNSMLGLGFAESKMVLPANDTVI 257 ++S++LE L A Y ++N +TG P A + + + G+ + AND++ Sbjct 121 GIISQLLEALGNASRGYMDFWDQVLNTLTGSPLAGTTWQNTFGILADIGRFSTVANDSMS 180 Query 258 STIFGMVQFQKFFN-PVTPFNPDLIPKSALGAGLGLRSAISSGLGSTAPAISAGASQAGS 316 M +F+ F+ PV + IPKSALGAGLGLRSA G G T A+S G +A S Sbjct 181 PINLAMTEFKMFYKLPVEGLD---IPKSALGAGLGLRSA---GAGLTG-AVSVGVGEANS 233 Query 317 VGGMSVPPSWAAATPAIRTVAAVFSSTGLQAVPAAAISEGSLLSQMALASVAGGALGGAA 376 VG +SVPP+WA+ATPAIR +A+ + A AA LL QMAL SV GGALG A Sbjct 234 VGRLSVPPTWASATPAIR-LASGLAPATAAAAAPAAGIPAGLLGQMALGSVTGGALGAVA 292 Query 377 ARATGGFLGGGRVTAVKKSLKDSDSPDKLRRVVAHMMEKPESVQHWHTDEDGLDDLLAEL 436 G G RV A K + P KL V+A + +PE+VQHW+ D+ GLDDLL L Sbjct 293 PHVGSGR--GVRVRAAKPA-----EPVKLDDVIAKLQRQPEAVQHWNVDKAGLDDLLDRL 345 Query 437 KKKPGIHAVHMAGGNKAEIAPTIS 460 KKPGIHAVH++ G K PT++ Sbjct 346 SKKPGIHAVHVSSGGK----PTVT 365 >gi|254822973|ref|ZP_05227974.1| PPE family protein [Mycobacterium intracellulare ATCC 13950] Length=435 Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 212/454 (47%), Positives = 271/454 (60%), Gaps = 45/454 (9%) Query 24 MLAAAAAWDGLATELQSTAADYGSVISVLTGVWSGQSSGTMAAAAAPYVAWMSATAALAR 83 MLAAA+AWDGLA +L S A Y SVIS LT W G SS TMA AAAPY AWMS TAA A Sbjct 1 MLAAASAWDGLAAQLHSAATSYESVISNLTSGWQGPSSLTMAGAAAPYAAWMSTTAAQAE 60 Query 84 EAAAQASAAAAAYEAAFAATVPPPVVAANRAELAVLAATNIFGQNTGAIAAAEARYAEMW 143 +AA++A AAAAAYEAAF ATVPP +A NR LA L ATN+ GQNT AIAA EA YA+MW Sbjct 61 QAASRARAAAAAYEAAFTATVPPVAIAENRGRLASLVATNLLGQNTAAIAATEAEYAQMW 120 Query 144 AQDAAAMYGYAGSSSVATQVTPFAAPPPTTNAAGLATQGVAVAQAVGASAGNARSLVSEV 203 AQDAAAMYGYAGSS++A Q+ PF APP TTN AG A Q AVAQA G + NA+S ++++ Sbjct 121 AQDAAAMYGYAGSSAIAAQLEPFNAPPQTTNPAGGAGQSGAVAQAAGTAPANAQSALAQL 180 Query 204 LEFLATAGTNY----------NKTVASLMNAVTGVPYASSVYNSMLGLGFAESKMVLPAN 253 + ++ ++A+ +N + P A N + F +K + P N Sbjct 181 MSSTPRTLQSFASPSALPAADPSSLATWLNNLNSTPLAKIAAN----IEFV-TKGIRPVN 235 Query 254 DTVISTIFGMVQFQKFFNPVTPFNPDLIPKSALGAGLGLRSAISSGLGSTAP-------- 305 DT++S G+V + + + L + + LGS+ P Sbjct 236 DTLLSLSLGLVATARTWG---------------DTAVELEGPLFASLGSSTPAAGAVGAS 280 Query 306 AISAGASQAGSVGGMSVPPSWAAATPAIRTVAAVFSSTGLQAVPAAAISEGSLLSQMALA 365 A++AG AG G +SVPPSWA A+PA++ A V T A P A G+ L QM LA Sbjct 281 AVTAGLGNAGLAGALSVPPSWAVASPAVKLAATVLEYTSAGAAPTVAAGAGA-LGQMGLA 339 Query 366 SVAGGALGGAAARATGG--FLGGGRVTAVKKSLKDSDSPDKLRRVVAHMMEKPESVQHWH 423 +AGGALGGA RA G GR + S D +PDKL+ V+A + E PESVQHWH Sbjct 340 GLAGGALGGAVPRAVAASPTRGLGR----RSSDNDDKTPDKLKTVLAELQEAPESVQHWH 395 Query 424 TDEDGLDDLLAELKKKPGIHAVHMAGGNKAEIAP 457 TD+ L+ LL +L KKPG+HAVH++ +K++ P Sbjct 396 TDKAHLESLLDQLSKKPGVHAVHLSSADKSKATP 429 >gi|183981478|ref|YP_001849769.1| PPE family protein [Mycobacterium marinum M] gi|183174804|gb|ACC39914.1| PPE family protein [Mycobacterium marinum M] Length=427 Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 191/396 (49%), Positives = 233/396 (59%), Gaps = 32/396 (8%) Query 1 MDFGVLPPEINSGRMYAGPGSGPMLAAAAAWDGLATELQSTAADYGSVISVLTG-VWSGQ 59 MDFG LPPEINSGRMY GPGSGPMLAAA WD LA EL +TAA Y S + LTG W G Sbjct 1 MDFGALPPEINSGRMYVGPGSGPMLAAAVVWDELAAELYATAAGYRSTLDGLTGGSWRGP 60 Query 60 SSGTMAAAAAPYVAWMSATAALAREAAAQASAAAAAYEAAFAATVPPPVVAANRAELAVL 119 +S +MAAAAAPYVAWM+ATAA A A +QA AA+AYE AFAATVPPPV+AANRA L L Sbjct 61 ASASMAAAAAPYVAWMTATAAQAELAGSQAKVAASAYETAFAATVPPPVIAANRALLMGL 120 Query 120 AATNIFGQNTGAIAAAEARYAEMWAQDAAAMYGYAGSSSVATQVTPFAAPPPTTNAAGLA 179 TNIFGQNT AIAA EA YAEMWAQDAAAMY YAGSS+ ATQVTPF PP T+ +G Sbjct 121 VFTNIFGQNTPAIAATEAHYAEMWAQDAAAMYAYAGSSATATQVTPFTEPPQITSPSGAV 180 Query 180 TQGVAVAQA--------VGASAGNARSLVSEVLEFLATAGTNYNKTVASLMNA------V 225 +Q AV +A + A ++V L+ +AT+G N +A L + + Sbjct 181 SQAAAVTEAATASASSDITAQLSPLIAVVPNALQGMATSG-NPAAAIAGLPDVALPAGII 239 Query 226 TGVPYASSVYNSMLGLGFAESKMVLP-----ANDTVISTIFGMVQFQKFFNPVTPFNPDL 280 T + +++ +++ G + +P A V + MV Q FF+P P L Sbjct 240 TDLQNFTTILDTLDGPFTIQGLTGVPGGPFLAFGQVYAFSQNMVGAQAFFSPAEPVIGGL 299 Query 281 IPKSALGAGLGLRSAISSGLGSTAPAISAGASQAGSVGGMSVPPSWAAATPAIRTVAAVF 340 P L L +A G S S A VG MSVP W PAIR VF Sbjct 300 AP---LAGEANLGAAGVVGGPSVGGQASGAMGHAALVGNMSVPQGWTQEAPAIR----VF 352 Query 341 SS---TGLQAVPAAAIS-EGSLLSQMALASVAGGAL 372 S T + A PAA ++ E ++ +QMAL+S+AG AL Sbjct 353 VSELPTSVTAAPAATLAGESAVFNQMALSSLAGRAL 388 >gi|240173095|ref|ZP_04751753.1| PPE family protein, PPE30 [Mycobacterium kansasii ATCC 12478] Length=358 Score = 247 bits (630), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 166/369 (45%), Positives = 210/369 (57%), Gaps = 29/369 (7%) Query 113 RAELAVLAATNIFGQNTGAIAAAEARYAEMWAQDAAAMYGYAGSSSVATQVTPFAAPPPT 172 R++LA L ATNIFGQNT AIAA EA+Y +MW QDA AM YAGSS+ A Q+TPF PP Sbjct 1 RSQLATLVATNIFGQNTPAIAATEAQYGQMWVQDAVAMDSYAGSSAAAGQLTPFTEPPQV 60 Query 173 TN-----------AAGLATQGVAVAQAVGASAGNARSLVSEVLEFLATAGTNYNKTVASL 221 N T AQ++ ASA +S +L+ A T Y K + L Sbjct 61 VNAAGLAGQAAAAGQAAGTSAGTAAQSILASA----DPISWLLQLGADLATAYTKAMNDL 116 Query 222 MNAVTGVPYASSVYNSML-----GLGFAESKMVLPANDTVISTIFGMVQFQKFFNPVTPF 276 +N + G P A++ Y + LGF ND + F + QF KF Sbjct 117 VNGIFG-PTAAADYIRLFLAVRGPLGFTTG-----FNDIGLLVNFPVSQFLKFGPHAAAG 170 Query 277 NPDLIPKSALGAGLGLRSAISSGLGSTAPA--ISAGASQAGSVGGMSVPPSWAAATPAIR 334 PK LGAGLGL G ++A + ++A + VG +SVPPSWA ATPAIR Sbjct 171 GLGEFPKEGLGAGLGLAPHWGRGWLTSATSGDVTAHWGRGTLVGSLSVPPSWATATPAIR 230 Query 335 TVAAVFSSTGLQAVPAAAISEGSLLSQMALASVAGGALGGAAARATGGFLGGGRVTAVKK 394 TVAA S+ G +AVPAAA+ EG LLS ALA + G ALG A A G GR+T K Sbjct 231 TVAAALSAAGPEAVPAAALGEGGLLSSTALAGMLGSALGAGAPSAVSGTGVRGRITPF-K 289 Query 395 SLKDSDSPDKLRRVVAHMMEKPESVQHWHTDEDGLDDLLAELKKKPGIHAVHMAGGNKAE 454 LKD+ SPDKL+R+VA + EKPESVQH D +GLD LL +L KKPGIHAVH++ G+K + Sbjct 290 DLKDATSPDKLKRLVAQISEKPESVQHHSVDPEGLDSLLEQLAKKPGIHAVHLSKGDKPK 349 Query 455 IAPTISESG 463 + P+ S+ G Sbjct 350 VVPSDSQLG 358 >gi|15841271|ref|NP_336308.1| PPE family protein [Mycobacterium tuberculosis CDC1551] gi|31792989|ref|NP_855482.1| PPE family protein [Mycobacterium bovis AF2122/97] gi|57116916|ref|YP_177840.1| PPE family protein [Mycobacterium tuberculosis H37Rv] 57 more sequence titles Length=423 Score = 244 bits (624), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 195/408 (48%), Positives = 234/408 (58%), Gaps = 43/408 (10%) Query 1 MDFGVLPPEINSGRMYAGPGSGPMLAAAAAWDGLATELQSTAADYGSVISVLTGVWSGQS 60 MDFG+LPPEINSGRMY GPG GPMLAAA AWDGLA EL +TAA Y S +S LTG WSG S Sbjct 1 MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGAWSGPS 60 Query 61 SGTMAAAAAPYVAWMSATAALAREAAAQASAAAAAYEAAFAATVPPPVVAANRAELAVLA 120 S +MA+AAAPYVAWMSATA A A AQA A AAYEAAFAATVPPPV+AANRA+L VL Sbjct 61 STSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVLI 120 Query 121 ATNIFGQNTGAIAAAEARYAEMWAQDAAAMYGYAGSSSVATQVTPFAAPPPTTNAAGLAT 180 ATNIFGQNT AI EA+Y EMWAQDAAAMYGYAGSS+ A+++T F PP TTN L Sbjct 121 ATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTAFTEPPQTTNHGQLGA 180 Query 181 Q-GVAVAQAVGASAGNARSLVSEVLE---------FLATAGTNYNKT---VASLMN---- 223 Q A A+ GN +S ++L L TA + + T V L N Sbjct 181 QSSAVAQTAATAAGGNLQSAFPQLLSAVPRALQGLALPTASQSASATPQWVTDLGNLSTF 240 Query 224 ---AVTGVPYA------SSVYNSMLGLGFAESKMVLPANDTVISTIFGMVQFQKFFNPVT 274 AVTG PY S +LG+ +++ N +S + G + + + Sbjct 241 LGGAVTG-PYTFPGVLPPSGVPYLLGI----QSVLVTQNGQGVSALLGKIGGKPITGALA 295 Query 275 PFNPDLIPKSALGAGLGLRSAISSGLGSTAPAISAGASQAGSVGGMSVPPSWAAATPAIR 334 P A L + I G ++SAG +AG VG +SVP W A P I Sbjct 296 PL-----------AEFALHTPILGSEGLGGGSVSAGIGRAGLVGKLSVPQGWTVAAPEIP 344 Query 335 TVAAVFSSTGLQAVPAAAIS-EGSLLSQMALASVAGGALGGAAARATG 381 + AA +T L A P AA G+LL MAL+ +AG A G+ G Sbjct 345 SPAAALQATRLAAAPIAATDGAGALLGGMALSGLAGRAAAGSTGHPIG 392 >gi|339294738|gb|AEJ46849.1| PPE family protein [Mycobacterium tuberculosis CCDC5079] Length=423 Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 194/404 (49%), Positives = 233/404 (58%), Gaps = 35/404 (8%) Query 1 MDFGVLPPEINSGRMYAGPGSGPMLAAAAAWDGLATELQSTAADYGSVISVLTGVWSGQS 60 MDFG+LPPEINSGRMY GPG GPMLAAA AWDGLA EL +TAA Y S +S LTG WSG S Sbjct 1 MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGAWSGPS 60 Query 61 SGTMAAAAAPYVAWMSATAALAREAAAQASAAAAAYEAAFAATVPPPVVAANRAELAVLA 120 S +MA+AAAPYVAWMSATA A A AQA A AAYEAAFAATVPPPV+AANRA+L VL Sbjct 61 STSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVLI 120 Query 121 ATNIFGQNTGAIAAAEARYAEMWAQDAAAMYGYAGSSSVATQVTPFAAPPPTTNAAGLAT 180 ATNIFGQNT AI EA+Y EMWAQDAAAMYGYAGSS+ A+++T F PP TTN L Sbjct 121 ATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTAFTEPPQTTNHGQLGA 180 Query 181 Q-GVAVAQAVGASAGNARSLVSEVLE---------FLATAGTNYNKT---VASLMN---- 223 Q A A+ GN +S ++L L TA + + T V L N Sbjct 181 QSSAVAQTAATAAGGNLQSAFPQLLSAVPRALQGLALPTASQSASATPQWVTDLGNLSTF 240 Query 224 ---AVTGVPYASSVYNSMLGLGFAES--KMVLPANDTVISTIFGMVQFQKFFNPVTPFNP 278 AVTG PY G+ + S +++ N +S + G + + + P Sbjct 241 LGGAVTG-PYTFPGVLPPSGVPYLLSIQSVLVTQNGQGVSALLGKIGGKPITGALAPL-- 297 Query 279 DLIPKSALGAGLGLRSAISSGLGSTAPAISAGASQAGSVGGMSVPPSWAAATPAIRTVAA 338 A L + I G ++SAG +AG VG +SVP W A P I + AA Sbjct 298 ---------AEFALHTPILGSEGLGGGSVSAGIGRAGLVGKLSVPQGWTVAAPEIPSPAA 348 Query 339 VFSSTGLQAVPAAAIS-EGSLLSQMALASVAGGALGGAAARATG 381 +T L A P AA G+LL MAL+ +AG A G+ G Sbjct 349 ALQATRLAAAPIAATDGAGALLGGMALSGLAGRAAAGSTGHPIG 392 >gi|339631855|ref|YP_004723497.1| PPE family protein [Mycobacterium africanum GM041182] gi|339331211|emb|CCC26893.1| PPE family protein [Mycobacterium africanum GM041182] Length=423 Score = 243 bits (621), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 194/408 (48%), Positives = 234/408 (58%), Gaps = 43/408 (10%) Query 1 MDFGVLPPEINSGRMYAGPGSGPMLAAAAAWDGLATELQSTAADYGSVISVLTGVWSGQS 60 MDFG+LPPEINSGRMY GPG GPMLAAA AWDGLA EL +TAA Y S +S LTG WSG S Sbjct 1 MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGAWSGPS 60 Query 61 SGTMAAAAAPYVAWMSATAALAREAAAQASAAAAAYEAAFAATVPPPVVAANRAELAVLA 120 S +MA+AAAPYVAWMSATA A A AQA A AAYEAAFAATVPPPV+AANRA+L VL Sbjct 61 STSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVLI 120 Query 121 ATNIFGQNTGAIAAAEARYAEMWAQDAAAMYGYAGSSSVATQVTPFAAPPPTTNAAGLAT 180 ATNIFGQNT AI EA+Y EMWAQD+AAMYGYAGSS+ A+++T F PP TTN L Sbjct 121 ATNIFGQNTPAIMMTEAQYMEMWAQDSAAMYGYAGSSATASRMTAFTEPPQTTNHGQLGA 180 Query 181 Q-GVAVAQAVGASAGNARSLVSEVLE---------FLATAGTNYNKT---VASLMN---- 223 Q A A+ GN +S ++L L TA + + T V L N Sbjct 181 QSSAVAQTAATAAGGNLQSAFPQLLSAVPRALQGLALPTASQSASATPQWVTDLGNLSTF 240 Query 224 ---AVTGVPYA------SSVYNSMLGLGFAESKMVLPANDTVISTIFGMVQFQKFFNPVT 274 AVTG PY S +LG+ +++ N +S + G + + + Sbjct 241 LGGAVTG-PYTFPGVLPPSGVPYLLGI----QSVLVTQNGQGVSALLGKIGGKPITGALA 295 Query 275 PFNPDLIPKSALGAGLGLRSAISSGLGSTAPAISAGASQAGSVGGMSVPPSWAAATPAIR 334 P A L + I G ++SAG +AG VG +SVP W A P I Sbjct 296 PL-----------AEFALHTPILGSEGLGGGSVSAGIGRAGLVGKLSVPQGWTVAAPEIP 344 Query 335 TVAAVFSSTGLQAVPAAAIS-EGSLLSQMALASVAGGALGGAAARATG 381 + AA +T L A P AA G+LL MAL+ +AG A G+ G Sbjct 345 SPAAALQATRLAAAPIAATDGAGALLGGMALSGLAGRAAAGSTGHPIG 392 >gi|289574478|ref|ZP_06454705.1| PPE family protein [Mycobacterium tuberculosis K85] gi|289538909|gb|EFD43487.1| PPE family protein [Mycobacterium tuberculosis K85] Length=423 Score = 243 bits (619), Expect = 7e-62, Method: Compositional matrix adjust. Identities = 192/414 (47%), Positives = 232/414 (57%), Gaps = 55/414 (13%) Query 1 MDFGVLPPEINSGRMYAGPGSGPMLAAAAAWDGLATELQSTAADYGSVISVLTGVWSGQS 60 MDFG+LPPEINSGRMY GPG GPMLAAA AWDGLA EL +TAA Y S +S LTG WSG S Sbjct 1 MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGAWSGPS 60 Query 61 SGTMAAAAAPYVAWMSATAALAREAAAQASAAAAAYEAAFAATVPPPVVAANRAELAVLA 120 S +MA+AAAPYVAWMSATA A A AQA A AAYEAAFAATVPPPV+AANRA+L VL Sbjct 61 STSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVLI 120 Query 121 ATNIFGQNTGAIAAAEARYAEMWAQDAAAMYGYAGSSSVATQVTPFAAPPPTTNAAGLAT 180 ATNIFGQNT AI EA+Y EMWAQD+AAMYGYAGSS+ A+++T F PP TTN L Sbjct 121 ATNIFGQNTPAIMMTEAQYMEMWAQDSAAMYGYAGSSATASRMTAFTEPPQTTNHGQLGA 180 Query 181 Q-GVAVAQAVGASAGNARSLVSEVLE---------FLATAGTNYNKT---VASLMNAVT- 226 Q A A+ GN +S ++L L TA + + T V L N T Sbjct 181 QSSAVAQTAATAAGGNLQSAFPQLLSAVPRALQGLALPTASQSASATPQWVTDLGNLSTF 240 Query 227 ------------------GVPYASSVYNSMLGLGFAESKMVLPANDTVISTIFGMVQFQK 268 GVPY +LG+ +++ N +S + G + + Sbjct 241 LGGEVTGPYTFPGVLPPSGVPY-------LLGI----QSVLVTQNGQGVSALLGKIGGKP 289 Query 269 FFNPVTPFNPDLIPKSALGAGLGLRSAISSGLGSTAPAISAGASQAGSVGGMSVPPSWAA 328 + P A L + I G ++SAG +AG VG +SVP W Sbjct 290 ITGALAPL-----------AEFALHTPILGSEGLGGGSVSAGIGRAGLVGKLSVPQGWTV 338 Query 329 ATPAIRTVAAVFSSTGLQAVPAAAIS-EGSLLSQMALASVAGGALGGAAARATG 381 A P I + AA +T L A P AA G+LL MAL+ +AG A G+ G Sbjct 339 AAPEIPSPAAALQATRLAAAPIAATDGAGALLGGMALSGLAGRAAAGSTGHPIG 392 >gi|118462279|ref|YP_882537.1| PPE family protein [Mycobacterium avium 104] gi|254775797|ref|ZP_05217313.1| PPE family protein [Mycobacterium avium subsp. avium ATCC 25291] gi|118163566|gb|ABK64463.1| PPE family protein [Mycobacterium avium 104] gi|212596099|gb|ACJ35551.1| PPE28 [Mycobacterium avium subsp. avium] Length=454 Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 212/468 (46%), Positives = 279/468 (60%), Gaps = 24/468 (5%) Query 2 DFGVLPPEINSGRMYAGPGSGPMLAAAAAWDGLATELQSTAADYGSVISVLTG-VWSGQS 60 DF LPPE+ S +++ GPG+ P+LAAAAAWDGLA EL TAA Y SVIS L G W G S Sbjct 5 DFATLPPEVISTQIHVGPGAVPLLAAAAAWDGLAAELHGTAASYASVISELVGESWQGSS 64 Query 61 SGTMAAAAAPYVAWMSATAALAREAAAQASAAAAAYEAAFAATVPPPVVAANRAELAVLA 120 S +MAAAAAPYVAW+SATA LA + AAQA AAAAAYE+A AATVPP VVAANR+ LA L Sbjct 65 SESMAAAAAPYVAWLSATAGLAEQTAAQARAAAAAYESAVAATVPPAVVAANRSLLATLL 124 Query 121 ATNIFGQNTGAIAAAEARYAEMWAQDAAAMYGYAGSSSVATQVTPFAAPPPTTNAAGLAT 180 TNI GQN AIAA E Y +MWAQD AAM+ YA +S A ++TPF P TTN AG AT Sbjct 125 QTNILGQNDAAIAATEDEYGQMWAQDVAAMFSYAAASESAGELTPFEQAPATTNDAGPAT 184 Query 181 QGVAVAQAVGASAGNARSLVSEVLEFLATAGTNYNKTVASLMNAVTG----VPYASSVYN 236 Q A A A S S + ++ ++ + Y + +L+ TG P+ ++Y+ Sbjct 185 QAAAAAAAESTS---LSSWLKQLEAYITSLTGQYTQFWQNLIGGATGSTEIAPFWETLYS 241 Query 237 SMLGLGFAESKMVLPANDTVISTI-FGMVQFQKFFNPVTPFNPDLIPKSALGAGLGLRSA 295 S+ +G + + V +TI G+ Q++ FF P++ + KS+LGAGL Sbjct 242 SISQVGTQATW-----TNVVNATIGLGVSQWKNFFI-YAPWSAAM-AKSSLGAGLASPGH 294 Query 296 ISSGLGSTAPAISAGASQAGSVGGMSVPPSWAAATPAIRTVAAVFSSTGLQAVPAAAISE 355 I+SG+ A +SA A +VG +SVP WA A PAIR + +T L A A S Sbjct 295 IASGIA--AKPVSAVLGNAPTVGELSVPAGWATAAPAIRLASTALPATSLAAAAATDFS- 351 Query 356 GSLLSQMALASVAGGALGGAAARATGGFLGGGRVTAVKKSLKDSDSPDKLRRVVAHMMEK 415 ++++ L S+AGGALG AAR G A+ + P KL R++A + + Sbjct 352 -GVVNEATLGSLAGGALGSPAARVVS--TTGIPTRAITGERR--QGPVKLDRIIAQLQQM 406 Query 416 PESVQHWHTDEDGLDDLLAELKKKPGIHAVHMAGGNKAEIAPTISESG 463 PE VQHW+ DE GLDDL+A L+ PG+HAVH+ G + + S+ G Sbjct 407 PEQVQHWNVDEAGLDDLVARLRTTPGVHAVHVTDGEQVAVGSPASKLG 454 >gi|254823257|ref|ZP_05228258.1| hypothetical protein MintA_25229 [Mycobacterium intracellulare ATCC 13950] Length=444 Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 204/428 (48%), Positives = 271/428 (64%), Gaps = 23/428 (5%) Query 39 QSTAADYGSVISVLTG-VWSGQSSGTMAAAAAPYVAWMSATAALAREAAAQASAAAAAYE 97 QSTA+ YG+++ L W+G S+ MAAAAA YVAWMS T+A A+ AA QA+AAA AYE Sbjct 16 QSTASSYGAIVEGLANEAWAGPSAVAMAAAAAQYVAWMSETSAQAKTAAVQATAAAGAYE 75 Query 98 AAFAATVPPPVVAANRAELAVLAATNIFGQNTGAIAAAEARYAEMWAQDAAAMYGYAGSS 157 +AFAA VPP +AANR LA L ATN FGQNT AIAA EA YAEMWAQDAAAMY YAG+S Sbjct 76 SAFAAVVPPTEIAANRVRLATLLATNAFGQNTAAIAATEAEYAEMWAQDAAAMYAYAGAS 135 Query 158 SVATQVTPFAAPPPTTNAAGLATQGVAVAQAVGASAGNA---------RSLVSEVLEFLA 208 + AT++ PF PP TTN G+A Q A+ +A G ++G A + S++LE + Sbjct 136 AAATRLAPFTEPPQTTNETGIAAQAAALGEATGVASGTAAATDAVAPPSGIFSDLLEAIG 195 Query 209 TAGTNYNKTVASLMNAVTGVPYASSVYNSMLGLGFAESKMVLPANDTVISTIFGMVQFQK 268 A Y + ++N +TG P A + + + G+ + AND++ M +F+ Sbjct 196 NASRGYMEFWDQVLNTLTGSPLAGTTWQNTFGILADIGRFSTVANDSMSPINLAMTEFKM 255 Query 269 FFN-PVTPFNPDLIPKSALGAGLGLRSAISSGLGSTAPAISAGASQAGSVGGMSVPPSWA 327 F+N PV + IPKSALGAGLG+RSA G G T+ A+SAG +A VG +SVPP+WA Sbjct 256 FYNLPVEGLD---IPKSALGAGLGMRSA---GAGLTS-AVSAGMGEANVVGKLSVPPAWA 308 Query 328 AATPAIRTVAAVFSSTGLQAVPAAAISEGSLLSQMALASVAGGALGGAAARATGGFLGGG 387 +ATPAIR +A+ + + A AA GSLL QMAL S+ GGALG + G Sbjct 309 SATPAIR-LASGLAPSAGIAAAPAAGIPGSLLGQMALGSLTGGALGAVTPQVVSGGGVRA 367 Query 388 RVTAVKKSLKDSDSPDKLRRVVAHMMEKPESVQHWHTDEDGLDDLLAELKKKPGIHAVHM 447 R K+ + P KL V+A + ++PE+VQHW+ D+ GLDDLL +L KKPGIHAVH+ Sbjct 368 RAGGATKAAE----PVKLDDVIAKLQKQPEAVQHWNVDKAGLDDLLDQLSKKPGIHAVHV 423 Query 448 AGGNKAEI 455 + G+K ++ Sbjct 424 SSGDKPKV 431 >gi|289447416|ref|ZP_06437160.1| PPE family protein [Mycobacterium tuberculosis CPHL_A] gi|289420374|gb|EFD17575.1| PPE family protein [Mycobacterium tuberculosis CPHL_A] Length=423 Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 194/408 (48%), Positives = 233/408 (58%), Gaps = 43/408 (10%) Query 1 MDFGVLPPEINSGRMYAGPGSGPMLAAAAAWDGLATELQSTAADYGSVISVLTGVWSGQS 60 MDFG+LPPEINSGRMY GPG GPMLAAA AWDGLA EL +TAA Y S +S LTG WSG S Sbjct 1 MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGAWSGPS 60 Query 61 SGTMAAAAAPYVAWMSATAALAREAAAQASAAAAAYEAAFAATVPPPVVAANRAELAVLA 120 S +MA+AAAPYVAWMSATA A A AQA A AAYEAAFAATVPPPV+AANRA+L L Sbjct 61 STSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMGLI 120 Query 121 ATNIFGQNTGAIAAAEARYAEMWAQDAAAMYGYAGSSSVATQVTPFAAPPPTTNAAGLAT 180 ATNIFGQNT AI EA+Y EMWAQDAAAMYGYAGSS+ A+++T F PP TTN L Sbjct 121 ATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTAFTEPPQTTNHGQLGA 180 Query 181 Q-GVAVAQAVGASAGNARSLVSEVLE---------FLATAGTNYNKT---VASLMN---- 223 Q A A+ GN +S ++L L TA + + T V L N Sbjct 181 QSSAVAQTAATAAGGNLQSAFPQLLSAVPRALQGLALPTASQSASATPQWVTDLGNLSTF 240 Query 224 ---AVTGVPYA------SSVYNSMLGLGFAESKMVLPANDTVISTIFGMVQFQKFFNPVT 274 AVTG PY S +LG+ +++ N +S + G + + + Sbjct 241 LGGAVTG-PYTFPGVLPPSGVPYLLGI----QSVLVTQNGQGVSALLGKIGGKPITGALA 295 Query 275 PFNPDLIPKSALGAGLGLRSAISSGLGSTAPAISAGASQAGSVGGMSVPPSWAAATPAIR 334 P A L + I G ++SAG +AG VG +SVP W A P I Sbjct 296 PL-----------AEFALHTPILGSEGLGGGSVSAGIGRAGLVGKLSVPQGWTVAAPEIP 344 Query 335 TVAAVFSSTGLQAVPAAAIS-EGSLLSQMALASVAGGALGGAAARATG 381 + AA +T L A P AA G+LL MAL+ +AG A G+ G Sbjct 345 SPAAALQATRLAAAPIAATDGPGALLGGMALSGLAGRAAAGSTGHPIG 392 >gi|240171262|ref|ZP_04749921.1| PPE family protein [Mycobacterium kansasii ATCC 12478] Length=415 Score = 239 bits (610), Expect = 8e-61, Method: Compositional matrix adjust. Identities = 202/402 (51%), Positives = 246/402 (62%), Gaps = 34/402 (8%) Query 1 MDFGVLPPEINSGRMYAGPGSGPMLAAAAAWDGLATELQSTAADYGSVISVLTGVWSGQS 60 +DFG LPPEINSGRMY GPGSGPMLAAAAAWD LA L STAA Y SVIS LT W G + Sbjct 3 IDFGALPPEINSGRMYIGPGSGPMLAAAAAWDSLAAGLHSTAASYSSVISGLTAGWQGPA 62 Query 61 SGTMAAAAAPYVAWMSATAALAREAAAQASAAAAAYEAAFAATVPPPVVAANRAELAVLA 120 S TMAAAAAPY AW++ATAA A + A QA AA A+E AFAATVPPP V ANRA+L L Sbjct 63 SITMAAAAAPYTAWINATAAQAEQTATQARVAAVAFETAFAATVPPPAVTANRAQLMALI 122 Query 121 ATNIFGQNTGAIAAAEARYAEMWAQDAAAMYGYAGSSSVATQVTPFAAPPPTTNAAGLAT 180 ATN FGQNT AI +A Y EMWAQDAAAMYGYAGSS+ A+QVTPF+ PP N AG Sbjct 123 ATNFFGQNTPAIMGTQAEYIEMWAQDAAAMYGYAGSSATASQVTPFSEPPQIANPAGTEW 182 Query 181 QGVAVAQAVGASAG-------NARSLVSEVLEFLATAGTNYNKTVASLMNAVTGVPYASS 233 Q AVA+A A AG S V L+ LA G++ A+ A + +S Sbjct 183 QAAAVARATSAVAGMQTMSLPQLMSGVPSSLQSLAAPGSSTALAAAADPTAPASL---AS 239 Query 234 VYNSMLGLGFAESKMVLPANDTVISTIFG---MVQFQKFFNPVTPFN------PDLIPKS 284 N+++ S + P++ + TI G ++ Q + P N + Sbjct 240 SLNTII------STITGPSSALSLFTIAGVPYLLGIQSYLLPQNVANVANAASKVSAASA 293 Query 285 ALGAGLGLRSAISSGLGSTAPAISAGASQAGSVGGMSVPPSWAAATPAIRTVAAVFSSTG 344 + G +G+ SA GL S A SAG +AG VGG+SVP WA + PA++ VAAVF+ G Sbjct 294 SSGGWVGVGSA-GGGLSSAA---SAGMGRAGLVGGLSVPQGWAMSAPAVKPVAAVFAENG 349 Query 345 LQAVPAAAIS--EGSLLSQMALASVAGGAL---GGAAARATG 381 L PAAA + EGSL S MAL+ +AG A+ GG AAR++G Sbjct 350 LTGAPAAAATQGEGSLFSNMALSGLAGRAMVPTGGTAARSSG 391 >gi|340626811|ref|YP_004745263.1| PPE family protein [Mycobacterium canettii CIPT 140010059] gi|340005001|emb|CCC44149.1| PPE family protein [Mycobacterium canettii CIPT 140010059] Length=423 Score = 237 bits (605), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 195/408 (48%), Positives = 235/408 (58%), Gaps = 43/408 (10%) Query 1 MDFGVLPPEINSGRMYAGPGSGPMLAAAAAWDGLATELQSTAADYGSVISVLTGVWSGQS 60 MDFG+LPPEINSGRMY GPG GPMLAAA AWDGLA EL +TAA Y S +S LTG WSG S Sbjct 1 MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGAWSGPS 60 Query 61 SGTMAAAAAPYVAWMSATAALAREAAAQASAAAAAYEAAFAATVPPPVVAANRAELAVLA 120 S +MA+AAAPYVAWMSATA A AAAQA A AAYEAAFAATVPPPV+AANRA+L VL Sbjct 61 STSMASAAAPYVAWMSATAVHAELAAAQARLAVAAYEAAFAATVPPPVIAANRAQLMVLI 120 Query 121 ATNIFGQNTGAIAAAEARYAEMWAQDAAAMYGYAGSSSVATQVTPFAAPPPTTNAAGLAT 180 ATNIFGQNT AI EA+Y EMWAQDAAAMYGYAGSS+ A+++T F PP TTN + L Sbjct 121 ATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTAFTEPPQTTNHSQLGA 180 Query 181 Q-GVAVAQAVGASAGNARSLVSEVLE---------FLATAGTNYNKT---VASLMN---- 223 Q A+ GN +S ++L L TA + + T V L N Sbjct 181 QSSAVAQTVATAAGGNLQSAFPQLLSAVPRALQGLALPTASQSASATPQWVTDLGNLSTF 240 Query 224 ---AVTGVPYA------SSVYNSMLGLGFAESKMVLPANDTVISTIFGMVQFQKFFNPVT 274 AVTG PY S +LG+ +++ N +S + G + + + Sbjct 241 LGGAVTG-PYTFPGVLPPSGVPYLLGI----QSVLVTQNGQGVSALLGKIGGKPITGALA 295 Query 275 PFNPDLIPKSALGAGLGLRSAISSGLGSTAPAISAGASQAGSVGGMSVPPSWAAATPAIR 334 P A L + I G ++SAG +AG VG +SVP W A P I Sbjct 296 PL-----------AEFALHTPILGSEGLGGGSVSAGIGRAGLVGKLSVPQGWTVAAPEIP 344 Query 335 TVAAVFSSTGLQAVPAAAIS-EGSLLSQMALASVAGGALGGAAARATG 381 + AA +T L A P AA G+LL MAL+ +AG A G+ G Sbjct 345 SPAAALQATRLAAAPMAATDGAGALLGGMALSGLAGRAAAGSTGHPIG 392 >gi|289761951|ref|ZP_06521329.1| PPE family protein [Mycobacterium tuberculosis GM 1503] gi|289709457|gb|EFD73473.1| PPE family protein [Mycobacterium tuberculosis GM 1503] Length=423 Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 180/371 (49%), Positives = 215/371 (58%), Gaps = 42/371 (11%) Query 1 MDFGVLPPEINSGRMYAGPGSGPMLAAAAAWDGLATELQSTAADYGSVISVLTGVWSGQS 60 MDFG+LPPEINSGRMY GPG GPMLAAA AWDGLA EL +TAA Y S +S LTG WSG S Sbjct 1 MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGAWSGPS 60 Query 61 SGTMAAAAAPYVAWMSATAALAREAAAQASAAAAAYEAAFAATVPPPVVAANRAELAVLA 120 S +MA+AAAPYVAWMSATA A A AQA A AAYEAAFAATVPPPV+AANRA+L VL Sbjct 61 STSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVLI 120 Query 121 ATNIFGQNTGAIAAAEARYAEMWAQDAAAMYGYAGSSSVATQVTPFAAPPPTTNAAGLAT 180 ATNIFGQNT AI EA+Y EMWAQDAAAMYGYAGSS+ A+++T F PP TTN L Sbjct 121 ATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATASRMTAFTEPPQTTNHGQLGA 180 Query 181 Q-GVAVAQAVGASAGNARSLVSEVLE---------FLATAGTNYNKT---VASLMN---- 223 Q A A+ GN +S ++L L TA + + T V L N Sbjct 181 QSSAVAQTAATAAGGNLQSAFPQLLSAVPRALQGLALPTASQSASATPQWVTDLGNLSTF 240 Query 224 ---AVTGVPYA------SSVYNSMLGLGFAESKMVLPANDTVISTIFGMVQFQKFFNPVT 274 AVTG PY S +LG+ +++ N +S + G + + + Sbjct 241 LGGAVTG-PYTFPGVLPPSGVPYLLGI----QSVLVTQNGQGVSALLGKIGGKPITGALA 295 Query 275 PFNPDLIPKSALGAGLGLRSAISSGLGSTAPAISAGASQAGSVGGMSVPPSWAAATPAIR 334 P A L + I G ++SAG +AG VG +SVP W A P I Sbjct 296 PL-----------AEFALHTPILGSEGLGGGSVSAGIGRAGLVGKLSVPQGWTVAAPEIP 344 Query 335 TVAAVFSSTGL 345 + AA +T L Sbjct 345 SPAAALQATRL 355 >gi|342861291|ref|ZP_08717939.1| hypothetical protein MCOL_20506 [Mycobacterium colombiense CECT 3035] gi|342131191|gb|EGT84472.1| hypothetical protein MCOL_20506 [Mycobacterium colombiense CECT 3035] Length=403 Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 192/415 (47%), Positives = 248/415 (60%), Gaps = 27/415 (6%) Query 64 MAAAAAPYVAWMSATAALAREAAAQASAAAAAYEAAFAATVPPPVVAANRAELAVLAATN 123 MA+AA PYVAWM TAA A +AAAQA+ AAAAYE AFAA VPP V+A NRA LA L ATN Sbjct 1 MASAATPYVAWMQQTAAQAAQAAAQATEAAAAYETAFAAHVPPAVIAENRALLAQLVATN 60 Query 124 IFGQNTGAIAAAEARYAEMWAQDAAAMYGYAGSSSVAT-QVTPFAAPPPTTNAAGLATQG 182 +FGQNT AIAA EA+Y+E WAQDA AM Y SS+ A+ ++T F+ P TTN A Q Sbjct 61 LFGQNTSAIAANEAQYSEFWAQDATAMDTYFASSATASNKLTAFSPAPKTTNEAAAPMQA 120 Query 183 VAVAQAVGASAGNARSL----------VSEVLEFLATAGTNYNKTVASLMNAVTGVPYAS 232 AV+ A A N + S + A YN+ V L+N G+P S Sbjct 121 AAVSSAASTPAANVANTAASAATTTLPYSGLFSGPANLAYLYNQFVTGLLN---GLPGGS 177 Query 233 SVYNSMLGLGFAESKMVLPANDTVISTIFGMVQFQKFFNPVTPFNPDLIPKSALGAGLGL 292 S Y + + ND + F + Q+ KF PV +PK ALGAG Sbjct 178 SFYTGLYNAVKVPLGLTTQFNDVGLLINFPLSQWLKFAPPV---GYGALPKDALGAG--- 231 Query 293 RSAISSGLGSTAPAIS--AGASQAGS-VGGMSVPPSWAAATPAIRTVAAVFSSTGLQAVP 349 A+ G G+ +IS AG AG+ VG +S+PPSWA ATP+IRTVAA S+ G +AVP Sbjct 232 LGALGFGRGTLYSSISPIAGMGNAGTLVGKLSIPPSWATATPSIRTVAAALSAAGTEAVP 291 Query 350 AAAISEGSLLSQMALASVAGGALG-GAAARATGGFLGGGRVTAVKKSLKDSDSPDKLRRV 408 A+A+ +GSL S M LA + G A+G G A G R+T + K LKD SP++L+R+ Sbjct 292 ASALGQGSLFSSMGLAGMLGSAVGAGGPTVARAGVR--NRMTPI-KDLKDKQSPEQLKRL 348 Query 409 VAHMMEKPESVQHWHTDEDGLDDLLAELKKKPGIHAVHMAGGNKAEIAPTISESG 463 VA + EKPE+VQH + D++ LD LL +L KKPGIHAVH+ G K+++ P ++SG Sbjct 349 VAQISEKPETVQHHNVDQENLDALLEQLAKKPGIHAVHLKKGGKSKVLPADAQSG 403 Lambda K H 0.312 0.125 0.352 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 973451812480 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40