BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1803c Length=639 Score E Sequences producing significant alignments: (Bits) Value gi|57116918|ref|YP_177842.1| PE-PGRS family protein [Mycobacteri... 1078 0.0 gi|289443277|ref|ZP_06433021.1| PE-PGRS family protein [Mycobact... 1078 0.0 gi|148661609|ref|YP_001283132.1| PE-PGRS family protein [Mycobac... 1077 0.0 gi|289447418|ref|ZP_06437162.1| PE-PGRS family protein [Mycobact... 1076 0.0 gi|340626813|ref|YP_004745265.1| PE-PGRS family protein [Mycobac... 1075 0.0 gi|15841273|ref|NP_336310.1| PE_PGRS family protein [Mycobacteri... 1055 0.0 gi|308402240|ref|ZP_07493532.2| putative PE family protein [Myco... 215 2e-53 gi|306972131|ref|ZP_07484792.1| putative PE family protein [Myco... 215 2e-53 gi|167967402|ref|ZP_02549679.1| PE_PGRS family protein [Mycobact... 215 2e-53 gi|118617772|ref|YP_906104.1| PE-PGRS family protein [Mycobacter... 145 2e-32 gi|183983010|ref|YP_001851301.1| PE-PGRS family protein [Mycobac... 145 2e-32 gi|183984531|ref|YP_001852822.1| PE-PGRS family protein [Mycobac... 133 9e-29 gi|183984157|ref|YP_001852448.1| PE-PGRS family protein [Mycobac... 123 1e-25 gi|183982655|ref|YP_001850946.1| PE-PGRS family protein [Mycobac... 116 2e-23 gi|183985312|ref|YP_001853603.1| PE-PGRS family protein [Mycobac... 115 2e-23 gi|183980964|ref|YP_001849255.1| PE-PGRS family protein [Mycobac... 115 3e-23 gi|183982972|ref|YP_001851263.1| PE-PGRS family protein [Mycobac... 114 5e-23 gi|183985012|ref|YP_001853303.1| PE-PGRS family protein [Mycobac... 114 5e-23 gi|339298994|gb|AEJ51104.1| PE-PGRS family protein [Mycobacteriu... 114 8e-23 gi|289553720|ref|ZP_06442930.1| LOW QUALITY PROTEIN: predicted p... 113 1e-22 gi|15842017|ref|NP_337054.1| PE_PGRS family protein [Mycobacteri... 112 2e-22 gi|339632516|ref|YP_004724158.1| PE-PGRS family protein [Mycobac... 112 2e-22 gi|344220317|gb|AEN00948.1| PE-PGRS family protein [Mycobacteriu... 112 2e-22 gi|289552831|ref|ZP_06442041.1| LOW QUALITY PROTEIN: predicted p... 112 2e-22 gi|253797511|ref|YP_003030512.1| PE-PGRS family protein [Mycobac... 112 2e-22 gi|57116996|ref|YP_177887.1| PE-PGRS family protein [Mycobacteri... 112 2e-22 gi|253798432|ref|YP_003031433.1| hypothetical protein TBMG_04024... 112 2e-22 gi|183982067|ref|YP_001850358.1| PE-PGRS family protein [Mycobac... 111 5e-22 gi|183981230|ref|YP_001849521.1| PE-PGRS family protein [Mycobac... 109 2e-21 gi|183982971|ref|YP_001851262.1| PE-PGRS family protein [Mycobac... 107 6e-21 gi|340625989|ref|YP_004744441.1| PE-PGRS family protein [Mycobac... 107 7e-21 gi|121637380|ref|YP_977603.1| PE-PGRS family protein [Mycobacter... 107 9e-21 gi|339631517|ref|YP_004723159.1| PE-PGRS family protein [Mycobac... 106 1e-20 gi|183982114|ref|YP_001850405.1| PE-PGRS family protein [Mycobac... 106 1e-20 gi|31792644|ref|NP_855137.1| PE-PGRS family protein [Mycobacteri... 106 2e-20 gi|183982116|ref|YP_001850407.1| PE-PGRS family protein [Mycobac... 105 2e-20 gi|183982130|ref|YP_001850421.1| PE-PGRS family protein [Mycobac... 105 3e-20 gi|183982495|ref|YP_001850786.1| PE-PGRS family protein [Mycobac... 104 5e-20 gi|183981460|ref|YP_001849751.1| PE-PGRS family protein [Mycobac... 103 7e-20 gi|57116908|ref|YP_177832.1| PE-PGRS family protein [Mycobacteri... 103 7e-20 gi|339631822|ref|YP_004723464.1| PE-PGRS family protein [Mycobac... 103 1e-19 gi|289569833|ref|ZP_06450060.1| PE-PGRS family protein [Mycobact... 103 1e-19 gi|31792957|ref|NP_855450.1| PE-PGRS family protein [Mycobacteri... 103 1e-19 gi|289447383|ref|ZP_06437127.1| PE-PGRS family protein [Mycobact... 102 2e-19 gi|121636997|ref|YP_977220.1| PE-PGRS family protein [Mycobacter... 101 5e-19 gi|339631132|ref|YP_004722774.1| PE-PGRS family protein [Mycobac... 100 6e-19 gi|340626105|ref|YP_004744557.1| PE-PGRS family protein [Mycobac... 100 6e-19 gi|340626079|ref|YP_004744531.1| PE-PGRS family protein [Mycobac... 100 9e-19 gi|15840909|ref|NP_335946.1| PE_PGRS family protein [Mycobacteri... 100 1e-18 gi|148822669|ref|YP_001287423.1| PE-PGRS family protein [Mycobac... 100 1e-18 >gi|57116918|ref|YP_177842.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv] gi|254550812|ref|ZP_05141259.1| PE_PGRS family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|289574481|ref|ZP_06454708.1| PE-PGRS family protein [Mycobacterium tuberculosis K85] 6 more sequence titles Length=639 Score = 1078 bits (2789), Expect = 0.0, Method: Compositional matrix adjust. Identities = 638/639 (99%), Positives = 639/639 (100%), Gaps = 0/639 (0%) Query 1 VWTSQMIVAPAFVDAAAKDLATIGSAISRANAEALVPITALLPAGADDVSAAIAALFATH 60 +WTSQMIVAPAFVDAAAKDLATIGSAISRANAEALVPITALLPAGADDVSAAIAALFATH Sbjct 1 MWTSQMIVAPAFVDAAAKDLATIGSAISRANAEALVPITALLPAGADDVSAAIAALFATH 60 Query 61 GQAYQELSAHAVAFHEQFVQLMSAGAAQYASAEAANSSPLQIVGQTALDAINSPVQTLTG 120 GQAYQELSAHAVAFHEQFVQLMSAGAAQYASAEAANSSPLQIVGQTALDAINSPVQTLTG Sbjct 61 GQAYQELSAHAVAFHEQFVQLMSAGAAQYASAEAANSSPLQIVGQTALDAINSPVQTLTG 120 Query 121 RPLIGNGANGVAGTGQNGGDGGWLYGNGGNGGSGGTGQNGGNGGSAGLWGSGGNGGQGGA 180 RPLIGNGANGVAGTGQNGGDGGWLYGNGGNGGSGGTGQNGGNGGSAGLWGSGGNGGQGGA Sbjct 121 RPLIGNGANGVAGTGQNGGDGGWLYGNGGNGGSGGTGQNGGNGGSAGLWGSGGNGGQGGA 180 Query 181 GANGAAGQPGKAGGSGGNGGAGGWIYGHGGHGGAGGNGGNATAPGGASAGFDGGAGGNGG 240 GANGAAGQPGKAGGSGGNGGAGGWIYGHGGHGGAGGNGGNATAPGGASAGFDGGAGGNGG Sbjct 181 GANGAAGQPGKAGGSGGNGGAGGWIYGHGGHGGAGGNGGNATAPGGASAGFDGGAGGNGG 240 Query 241 SGGRGGLLFGNGGNGSVGGMGGQGTNDTAGDSAGSGGLGGNGGNGAQGGWLIGNGGQGGD 300 SGGRGGLLFGNGGNGSVGGMGGQGTNDTAGDSAGSGGLGGNGGNGAQGGWLIGNGGQGGD Sbjct 241 SGGRGGLLFGNGGNGSVGGMGGQGTNDTAGDSAGSGGLGGNGGNGAQGGWLIGNGGQGGD 300 Query 301 SGAGGGTDSTQTGVMNGASGGSAGIAGNGGDAGLVGNGGAGGNGGNGAAGSALGTTIFGG 360 SGAGGGTDSTQTGVMNGASGGSAGIAGNGGDAGLVGNGGAGGNGGNGAAGSALGTTIFGG Sbjct 301 SGAGGGTDSTQTGVMNGASGGSAGIAGNGGDAGLVGNGGAGGNGGNGAAGSALGTTIFGG 360 Query 361 SGGVGGSGGDGGNGGWLFGSGASGGNGGQGGDAGTNGFAGFGGSAGGGGWVGAVNFGPIS 420 SGGVGGSGGDGGNGGWLFGSGASGGNGGQGGDAGTNGFAGFGGSAGGGGWVGAVNFGPIS Sbjct 361 SGGVGGSGGDGGNGGWLFGSGASGGNGGQGGDAGTNGFAGFGGSAGGGGWVGAVNFGPIS 420 Query 421 VQGFGLFGHGGDGGNGGDVGAGSLSIQFGASGGDGGQGGVLYGNGGNGGNAGSGGGTGFE 480 VQGFGLFGHGGDGGNGGDVGAGSLSIQFGASGGDGGQGGVLYGNGGNGGNAGSGGGTGFE Sbjct 421 VQGFGLFGHGGDGGNGGDVGAGSLSIQFGASGGDGGQGGVLYGNGGNGGNAGSGGGTGFE 480 Query 481 GSAGQGGAAILIGNGGAGGNGATGGTGVGNIIQEAGGDGSDGGAGGSGGLLFGSGGAGGI 540 GSAGQGGAAILIGNGGAGGNGATGGTGVGNIIQEAGGDGSDGGAGGSGGLLFGSGGAGGI Sbjct 481 GSAGQGGAAILIGNGGAGGNGATGGTGVGNIIQEAGGDGSDGGAGGSGGLLFGSGGAGGI 540 Query 541 GGAGGVGGSGNDGGNGGDGGQGGASGLGIGNGGPGGSGGTGGAGGTGGSAGTGGAGGDGG 600 GGAGGVGGSGNDGGNGGDGGQGGASGLGIGNGGPGGSGGTGGAGGTGGSAGTGGAGGDGG Sbjct 541 GGAGGVGGSGNDGGNGGDGGQGGASGLGIGNGGPGGSGGTGGAGGTGGSAGTGGAGGDGG 600 Query 601 NAALLIGTGGDGGDGVPPAPGGQGGKGGLIGLPGQNGQP 639 NAALLIGTGGDGGDGVPPAPGGQGGKGGLIGLPGQNGQP Sbjct 601 NAALLIGTGGDGGDGVPPAPGGQGGKGGLIGLPGQNGQP 639 >gi|289443277|ref|ZP_06433021.1| PE-PGRS family protein [Mycobacterium tuberculosis T46] gi|289569875|ref|ZP_06450102.1| PE-PGRS family protein [Mycobacterium tuberculosis T17] gi|289753898|ref|ZP_06513276.1| predicted protein [Mycobacterium tuberculosis EAS054] gi|289416196|gb|EFD13436.1| PE-PGRS family protein [Mycobacterium tuberculosis T46] gi|289543629|gb|EFD47277.1| PE-PGRS family protein [Mycobacterium tuberculosis T17] gi|289694485|gb|EFD61914.1| predicted protein [Mycobacterium tuberculosis EAS054] Length=639 Score = 1078 bits (2787), Expect = 0.0, Method: Compositional matrix adjust. Identities = 637/639 (99%), Positives = 638/639 (99%), Gaps = 0/639 (0%) Query 1 VWTSQMIVAPAFVDAAAKDLATIGSAISRANAEALVPITALLPAGADDVSAAIAALFATH 60 +WTSQMIVAPAFVDAAAKDLATIGSAISRANAEALVPITALLPAGADDVSAAIAALFATH Sbjct 1 MWTSQMIVAPAFVDAAAKDLATIGSAISRANAEALVPITALLPAGADDVSAAIAALFATH 60 Query 61 GQAYQELSAHAVAFHEQFVQLMSAGAAQYASAEAANSSPLQIVGQTALDAINSPVQTLTG 120 GQAYQELSAHAVAFHEQFVQLMSAGAAQYASAEAANSSPLQIVGQTALDAINSPVQTLTG Sbjct 61 GQAYQELSAHAVAFHEQFVQLMSAGAAQYASAEAANSSPLQIVGQTALDAINSPVQTLTG 120 Query 121 RPLIGNGANGVAGTGQNGGDGGWLYGNGGNGGSGGTGQNGGNGGSAGLWGSGGNGGQGGA 180 RPLIGNGANGVAGTGQNGGDGGWLYGNGGNGGSGGTGQNGGNGGSAGLWGSGGNGGQGGA Sbjct 121 RPLIGNGANGVAGTGQNGGDGGWLYGNGGNGGSGGTGQNGGNGGSAGLWGSGGNGGQGGA 180 Query 181 GANGAAGQPGKAGGSGGNGGAGGWIYGHGGHGGAGGNGGNATAPGGASAGFDGGAGGNGG 240 GANGAAGQPGKAGGSGGNGGAGGWIYGHGGHGGAGGNGGNATAPGGASAGFDGGAGGNGG Sbjct 181 GANGAAGQPGKAGGSGGNGGAGGWIYGHGGHGGAGGNGGNATAPGGASAGFDGGAGGNGG 240 Query 241 SGGRGGLLFGNGGNGSVGGMGGQGTNDTAGDSAGSGGLGGNGGNGAQGGWLIGNGGQGGD 300 SGGRGGLLFGNGGNGSVGGMGGQGTNDTAGDSAGSGGLGGNGGNGAQGGWLIGNGGQGGD Sbjct 241 SGGRGGLLFGNGGNGSVGGMGGQGTNDTAGDSAGSGGLGGNGGNGAQGGWLIGNGGQGGD 300 Query 301 SGAGGGTDSTQTGVMNGASGGSAGIAGNGGDAGLVGNGGAGGNGGNGAAGSALGTTIFGG 360 SGAGGGTDSTQTGVMNGASGGSAGIAGNGGD GLVGNGGAGGNGGNGAAGSALGTTIFGG Sbjct 301 SGAGGGTDSTQTGVMNGASGGSAGIAGNGGDTGLVGNGGAGGNGGNGAAGSALGTTIFGG 360 Query 361 SGGVGGSGGDGGNGGWLFGSGASGGNGGQGGDAGTNGFAGFGGSAGGGGWVGAVNFGPIS 420 SGGVGGSGGDGGNGGWLFGSGASGGNGGQGGDAGTNGFAGFGGSAGGGGWVGAVNFGPIS Sbjct 361 SGGVGGSGGDGGNGGWLFGSGASGGNGGQGGDAGTNGFAGFGGSAGGGGWVGAVNFGPIS 420 Query 421 VQGFGLFGHGGDGGNGGDVGAGSLSIQFGASGGDGGQGGVLYGNGGNGGNAGSGGGTGFE 480 VQGFGLFGHGGDGGNGGDVGAGSLSIQFGASGGDGGQGGVLYGNGGNGGNAGSGGGTGFE Sbjct 421 VQGFGLFGHGGDGGNGGDVGAGSLSIQFGASGGDGGQGGVLYGNGGNGGNAGSGGGTGFE 480 Query 481 GSAGQGGAAILIGNGGAGGNGATGGTGVGNIIQEAGGDGSDGGAGGSGGLLFGSGGAGGI 540 GSAGQGGAAILIGNGGAGGNGATGGTGVGNIIQEAGGDGSDGGAGGSGGLLFGSGGAGGI Sbjct 481 GSAGQGGAAILIGNGGAGGNGATGGTGVGNIIQEAGGDGSDGGAGGSGGLLFGSGGAGGI 540 Query 541 GGAGGVGGSGNDGGNGGDGGQGGASGLGIGNGGPGGSGGTGGAGGTGGSAGTGGAGGDGG 600 GGAGGVGGSGNDGGNGGDGGQGGASGLGIGNGGPGGSGGTGGAGGTGGSAGTGGAGGDGG Sbjct 541 GGAGGVGGSGNDGGNGGDGGQGGASGLGIGNGGPGGSGGTGGAGGTGGSAGTGGAGGDGG 600 Query 601 NAALLIGTGGDGGDGVPPAPGGQGGKGGLIGLPGQNGQP 639 NAALLIGTGGDGGDGVPPAPGGQGGKGGLIGLPGQNGQP Sbjct 601 NAALLIGTGGDGGDGVPPAPGGQGGKGGLIGLPGQNGQP 639 >gi|148661609|ref|YP_001283132.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] gi|148823017|ref|YP_001287771.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] gi|253799155|ref|YP_003032156.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435] 22 more sequence titles Length=650 Score = 1077 bits (2785), Expect = 0.0, Method: Compositional matrix adjust. Identities = 639/639 (100%), Positives = 639/639 (100%), Gaps = 0/639 (0%) Query 1 VWTSQMIVAPAFVDAAAKDLATIGSAISRANAEALVPITALLPAGADDVSAAIAALFATH 60 VWTSQMIVAPAFVDAAAKDLATIGSAISRANAEALVPITALLPAGADDVSAAIAALFATH Sbjct 12 VWTSQMIVAPAFVDAAAKDLATIGSAISRANAEALVPITALLPAGADDVSAAIAALFATH 71 Query 61 GQAYQELSAHAVAFHEQFVQLMSAGAAQYASAEAANSSPLQIVGQTALDAINSPVQTLTG 120 GQAYQELSAHAVAFHEQFVQLMSAGAAQYASAEAANSSPLQIVGQTALDAINSPVQTLTG Sbjct 72 GQAYQELSAHAVAFHEQFVQLMSAGAAQYASAEAANSSPLQIVGQTALDAINSPVQTLTG 131 Query 121 RPLIGNGANGVAGTGQNGGDGGWLYGNGGNGGSGGTGQNGGNGGSAGLWGSGGNGGQGGA 180 RPLIGNGANGVAGTGQNGGDGGWLYGNGGNGGSGGTGQNGGNGGSAGLWGSGGNGGQGGA Sbjct 132 RPLIGNGANGVAGTGQNGGDGGWLYGNGGNGGSGGTGQNGGNGGSAGLWGSGGNGGQGGA 191 Query 181 GANGAAGQPGKAGGSGGNGGAGGWIYGHGGHGGAGGNGGNATAPGGASAGFDGGAGGNGG 240 GANGAAGQPGKAGGSGGNGGAGGWIYGHGGHGGAGGNGGNATAPGGASAGFDGGAGGNGG Sbjct 192 GANGAAGQPGKAGGSGGNGGAGGWIYGHGGHGGAGGNGGNATAPGGASAGFDGGAGGNGG 251 Query 241 SGGRGGLLFGNGGNGSVGGMGGQGTNDTAGDSAGSGGLGGNGGNGAQGGWLIGNGGQGGD 300 SGGRGGLLFGNGGNGSVGGMGGQGTNDTAGDSAGSGGLGGNGGNGAQGGWLIGNGGQGGD Sbjct 252 SGGRGGLLFGNGGNGSVGGMGGQGTNDTAGDSAGSGGLGGNGGNGAQGGWLIGNGGQGGD 311 Query 301 SGAGGGTDSTQTGVMNGASGGSAGIAGNGGDAGLVGNGGAGGNGGNGAAGSALGTTIFGG 360 SGAGGGTDSTQTGVMNGASGGSAGIAGNGGDAGLVGNGGAGGNGGNGAAGSALGTTIFGG Sbjct 312 SGAGGGTDSTQTGVMNGASGGSAGIAGNGGDAGLVGNGGAGGNGGNGAAGSALGTTIFGG 371 Query 361 SGGVGGSGGDGGNGGWLFGSGASGGNGGQGGDAGTNGFAGFGGSAGGGGWVGAVNFGPIS 420 SGGVGGSGGDGGNGGWLFGSGASGGNGGQGGDAGTNGFAGFGGSAGGGGWVGAVNFGPIS Sbjct 372 SGGVGGSGGDGGNGGWLFGSGASGGNGGQGGDAGTNGFAGFGGSAGGGGWVGAVNFGPIS 431 Query 421 VQGFGLFGHGGDGGNGGDVGAGSLSIQFGASGGDGGQGGVLYGNGGNGGNAGSGGGTGFE 480 VQGFGLFGHGGDGGNGGDVGAGSLSIQFGASGGDGGQGGVLYGNGGNGGNAGSGGGTGFE Sbjct 432 VQGFGLFGHGGDGGNGGDVGAGSLSIQFGASGGDGGQGGVLYGNGGNGGNAGSGGGTGFE 491 Query 481 GSAGQGGAAILIGNGGAGGNGATGGTGVGNIIQEAGGDGSDGGAGGSGGLLFGSGGAGGI 540 GSAGQGGAAILIGNGGAGGNGATGGTGVGNIIQEAGGDGSDGGAGGSGGLLFGSGGAGGI Sbjct 492 GSAGQGGAAILIGNGGAGGNGATGGTGVGNIIQEAGGDGSDGGAGGSGGLLFGSGGAGGI 551 Query 541 GGAGGVGGSGNDGGNGGDGGQGGASGLGIGNGGPGGSGGTGGAGGTGGSAGTGGAGGDGG 600 GGAGGVGGSGNDGGNGGDGGQGGASGLGIGNGGPGGSGGTGGAGGTGGSAGTGGAGGDGG Sbjct 552 GGAGGVGGSGNDGGNGGDGGQGGASGLGIGNGGPGGSGGTGGAGGTGGSAGTGGAGGDGG 611 Query 601 NAALLIGTGGDGGDGVPPAPGGQGGKGGLIGLPGQNGQP 639 NAALLIGTGGDGGDGVPPAPGGQGGKGGLIGLPGQNGQP Sbjct 612 NAALLIGTGGDGGDGVPPAPGGQGGKGGLIGLPGQNGQP 650 >gi|289447418|ref|ZP_06437162.1| PE-PGRS family protein [Mycobacterium tuberculosis CPHL_A] gi|289420376|gb|EFD17577.1| PE-PGRS family protein [Mycobacterium tuberculosis CPHL_A] Length=639 Score = 1076 bits (2782), Expect = 0.0, Method: Compositional matrix adjust. Identities = 636/639 (99%), Positives = 638/639 (99%), Gaps = 0/639 (0%) Query 1 VWTSQMIVAPAFVDAAAKDLATIGSAISRANAEALVPITALLPAGADDVSAAIAALFATH 60 +WTSQMIVAPAFVDAAAKDLATIGSAISRANAEALVPITALLPAGADDVSAAIAALFATH Sbjct 1 MWTSQMIVAPAFVDAAAKDLATIGSAISRANAEALVPITALLPAGADDVSAAIAALFATH 60 Query 61 GQAYQELSAHAVAFHEQFVQLMSAGAAQYASAEAANSSPLQIVGQTALDAINSPVQTLTG 120 GQAYQELSAHAVAFH+QFVQLMSAGAAQYASAEAANSSPLQIVGQTALDAINSPVQTLTG Sbjct 61 GQAYQELSAHAVAFHDQFVQLMSAGAAQYASAEAANSSPLQIVGQTALDAINSPVQTLTG 120 Query 121 RPLIGNGANGVAGTGQNGGDGGWLYGNGGNGGSGGTGQNGGNGGSAGLWGSGGNGGQGGA 180 RPLIGNGANGVAGTGQNGGDGGWLYGNGGNGGSGGTGQNGGNGGSAGLWGSGGNGGQGGA Sbjct 121 RPLIGNGANGVAGTGQNGGDGGWLYGNGGNGGSGGTGQNGGNGGSAGLWGSGGNGGQGGA 180 Query 181 GANGAAGQPGKAGGSGGNGGAGGWIYGHGGHGGAGGNGGNATAPGGASAGFDGGAGGNGG 240 GANGAAGQPGKAGGSGGNGGAGGWIYGHGGHGGAGGNGGNATAPGGASAGFDGGAGGNGG Sbjct 181 GANGAAGQPGKAGGSGGNGGAGGWIYGHGGHGGAGGNGGNATAPGGASAGFDGGAGGNGG 240 Query 241 SGGRGGLLFGNGGNGSVGGMGGQGTNDTAGDSAGSGGLGGNGGNGAQGGWLIGNGGQGGD 300 SGGRGGLLFGNGGNGSVGGMGGQGTNDTAGDSAGSGGLGGNGGNGAQGGWLIGNGGQGGD Sbjct 241 SGGRGGLLFGNGGNGSVGGMGGQGTNDTAGDSAGSGGLGGNGGNGAQGGWLIGNGGQGGD 300 Query 301 SGAGGGTDSTQTGVMNGASGGSAGIAGNGGDAGLVGNGGAGGNGGNGAAGSALGTTIFGG 360 SGAGGGTDSTQTGVMNGASGGSAGIAGNGGDAGLVGNGGAGGNGGNGAAGSALGTTIFGG Sbjct 301 SGAGGGTDSTQTGVMNGASGGSAGIAGNGGDAGLVGNGGAGGNGGNGAAGSALGTTIFGG 360 Query 361 SGGVGGSGGDGGNGGWLFGSGASGGNGGQGGDAGTNGFAGFGGSAGGGGWVGAVNFGPIS 420 SGGVGGSGGDGGNGGWLFGSGASGGNGGQGGDAGTNGFAGFGGSAGGGGWVGAVNFGPIS Sbjct 361 SGGVGGSGGDGGNGGWLFGSGASGGNGGQGGDAGTNGFAGFGGSAGGGGWVGAVNFGPIS 420 Query 421 VQGFGLFGHGGDGGNGGDVGAGSLSIQFGASGGDGGQGGVLYGNGGNGGNAGSGGGTGFE 480 VQGFGLFGHGGDGGNGGDVGAGSLSIQFGASGGDGGQGGVLYGNGGNGGNAGSGGGTGFE Sbjct 421 VQGFGLFGHGGDGGNGGDVGAGSLSIQFGASGGDGGQGGVLYGNGGNGGNAGSGGGTGFE 480 Query 481 GSAGQGGAAILIGNGGAGGNGATGGTGVGNIIQEAGGDGSDGGAGGSGGLLFGSGGAGGI 540 GS GQGGAAILIGNGGAGGNGATGGTGVGNIIQEAGGDGSDGGAGGSGGLLFGSGGAGGI Sbjct 481 GSTGQGGAAILIGNGGAGGNGATGGTGVGNIIQEAGGDGSDGGAGGSGGLLFGSGGAGGI 540 Query 541 GGAGGVGGSGNDGGNGGDGGQGGASGLGIGNGGPGGSGGTGGAGGTGGSAGTGGAGGDGG 600 GGAGGVGGSGNDGGNGGDGGQGGASGLGIGNGGPGGSGGTGGAGGTGGSAGTGGAGGDGG Sbjct 541 GGAGGVGGSGNDGGNGGDGGQGGASGLGIGNGGPGGSGGTGGAGGTGGSAGTGGAGGDGG 600 Query 601 NAALLIGTGGDGGDGVPPAPGGQGGKGGLIGLPGQNGQP 639 NAALLIGTGGDGGDGVPPAPGGQGGKGGLIGLPGQNGQP Sbjct 601 NAALLIGTGGDGGDGVPPAPGGQGGKGGLIGLPGQNGQP 639 >gi|340626813|ref|YP_004745265.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] gi|340005003|emb|CCC44151.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] Length=639 Score = 1075 bits (2779), Expect = 0.0, Method: Compositional matrix adjust. Identities = 636/639 (99%), Positives = 638/639 (99%), Gaps = 0/639 (0%) Query 1 VWTSQMIVAPAFVDAAAKDLATIGSAISRANAEALVPITALLPAGADDVSAAIAALFATH 60 +WTSQMIVAPAFVDAAAKDLATIGSAISRANAEALVPITALLPAGADDVSAAIAALFATH Sbjct 1 MWTSQMIVAPAFVDAAAKDLATIGSAISRANAEALVPITALLPAGADDVSAAIAALFATH 60 Query 61 GQAYQELSAHAVAFHEQFVQLMSAGAAQYASAEAANSSPLQIVGQTALDAINSPVQTLTG 120 GQAYQELSAHAVAFHEQFVQLMSAGAAQYASAEAANSSPLQIVGQTALDAINSPVQTLTG Sbjct 61 GQAYQELSAHAVAFHEQFVQLMSAGAAQYASAEAANSSPLQIVGQTALDAINSPVQTLTG 120 Query 121 RPLIGNGANGVAGTGQNGGDGGWLYGNGGNGGSGGTGQNGGNGGSAGLWGSGGNGGQGGA 180 RPLIGNGANGVAGTGQNGGDGGWLYGNGGNGGSGGTGQNGGNGGSAGLWGSGGNGGQGGA Sbjct 121 RPLIGNGANGVAGTGQNGGDGGWLYGNGGNGGSGGTGQNGGNGGSAGLWGSGGNGGQGGA 180 Query 181 GANGAAGQPGKAGGSGGNGGAGGWIYGHGGHGGAGGNGGNATAPGGASAGFDGGAGGNGG 240 GANGAAGQPG AGGSGGNGGAGGWIYGHGGHGGAGGNGGNATAPGGASAGFDGGAGGNGG Sbjct 181 GANGAAGQPGNAGGSGGNGGAGGWIYGHGGHGGAGGNGGNATAPGGASAGFDGGAGGNGG 240 Query 241 SGGRGGLLFGNGGNGSVGGMGGQGTNDTAGDSAGSGGLGGNGGNGAQGGWLIGNGGQGGD 300 SGGRGGLLFGNGGNGSVGGMGGQGTNDTAGDSAGSGGLGGNGGNGAQGGWLIGNGGQGGD Sbjct 241 SGGRGGLLFGNGGNGSVGGMGGQGTNDTAGDSAGSGGLGGNGGNGAQGGWLIGNGGQGGD 300 Query 301 SGAGGGTDSTQTGVMNGASGGSAGIAGNGGDAGLVGNGGAGGNGGNGAAGSALGTTIFGG 360 SGAGGGTDSTQTGVMNGASGGSAGIAGNGGDAGLVGNGGAGGNGGNGAAGSALGTTIFGG Sbjct 301 SGAGGGTDSTQTGVMNGASGGSAGIAGNGGDAGLVGNGGAGGNGGNGAAGSALGTTIFGG 360 Query 361 SGGVGGSGGDGGNGGWLFGSGASGGNGGQGGDAGTNGFAGFGGSAGGGGWVGAVNFGPIS 420 SGGVGGSGGDGGNGGWLFGSGASGGNGGQGGDAGTNGFAGFGGSAGGGGWVGAVNFGPIS Sbjct 361 SGGVGGSGGDGGNGGWLFGSGASGGNGGQGGDAGTNGFAGFGGSAGGGGWVGAVNFGPIS 420 Query 421 VQGFGLFGHGGDGGNGGDVGAGSLSIQFGASGGDGGQGGVLYGNGGNGGNAGSGGGTGFE 480 VQGFGLFGHGGDGGNGGDVGAGSLSIQFGASGGDGGQGGVLYGNGGNGGNAGSGGGTGFE Sbjct 421 VQGFGLFGHGGDGGNGGDVGAGSLSIQFGASGGDGGQGGVLYGNGGNGGNAGSGGGTGFE 480 Query 481 GSAGQGGAAILIGNGGAGGNGATGGTGVGNIIQEAGGDGSDGGAGGSGGLLFGSGGAGGI 540 GSAGQGGAAILIGNGGAGGNGATGGTGVGNIIQEAGGDGSDGGAGGSGGLLFGSGGAGGI Sbjct 481 GSAGQGGAAILIGNGGAGGNGATGGTGVGNIIQEAGGDGSDGGAGGSGGLLFGSGGAGGI 540 Query 541 GGAGGVGGSGNDGGNGGDGGQGGASGLGIGNGGPGGSGGTGGAGGTGGSAGTGGAGGDGG 600 GGAGGVGGSGNDGGNGGDGGQGG+SGLGIGNGGPGGSGGTGGAGGTGGSAGTGGAGGDGG Sbjct 541 GGAGGVGGSGNDGGNGGDGGQGGSSGLGIGNGGPGGSGGTGGAGGTGGSAGTGGAGGDGG 600 Query 601 NAALLIGTGGDGGDGVPPAPGGQGGKGGLIGLPGQNGQP 639 NAALLIGTGGDGGDGVPPAPGGQGGKGGLIGLPGQNGQP Sbjct 601 NAALLIGTGGDGGDGVPPAPGGQGGKGGLIGLPGQNGQP 639 >gi|15841273|ref|NP_336310.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] gi|13881501|gb|AAK46124.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] Length=650 Score = 1055 bits (2727), Expect = 0.0, Method: Compositional matrix adjust. Identities = 627/639 (99%), Positives = 627/639 (99%), Gaps = 0/639 (0%) Query 1 VWTSQMIVAPAFVDAAAKDLATIGSAISRANAEALVPITALLPAGADDVSAAIAALFATH 60 VWTSQMIVAPAFVDAAAKDLATIGSAISRANAEALVPITALLPAGADDVSAAIAALFATH Sbjct 12 VWTSQMIVAPAFVDAAAKDLATIGSAISRANAEALVPITALLPAGADDVSAAIAALFATH 71 Query 61 GQAYQELSAHAVAFHEQFVQLMSAGAAQYASAEAANSSPLQIVGQTALDAINSPVQTLTG 120 GQAYQELSAHAVAFHEQFVQLMSAGAAQYASAEAANSSPLQIVGQTALDAINSPVQTLTG Sbjct 72 GQAYQELSAHAVAFHEQFVQLMSAGAAQYASAEAANSSPLQIVGQTALDAINSPVQTLTG 131 Query 121 RPLIGNGANGVAGTGQNGGDGGWLYGNGGNGGSGGTGQNGGNGGSAGLWGSGGNGGQGGA 180 RPLIGNGANGVAGTGQNGGDGGWLYGNGGNGGSGGTGQNGGNGGSAGLWGSGGNGGQGGA Sbjct 132 RPLIGNGANGVAGTGQNGGDGGWLYGNGGNGGSGGTGQNGGNGGSAGLWGSGGNGGQGGA 191 Query 181 GANGAAGQPGKAGGSGGNGGAGGWIYGHGGHGGAGGNGGNATAPGGASAGFDGGAGGNGG 240 GANGAAGQPGKAGGSGGNGGAGGWIYGHGGHGGAGGNGGNATAPGGASAGFDGGAGGNGG Sbjct 192 GANGAAGQPGKAGGSGGNGGAGGWIYGHGGHGGAGGNGGNATAPGGASAGFDGGAGGNGG 251 Query 241 SGGRGGLLFGNGGNGSVGGMGGQGTNDTAGDSAGSGGLGGNGGNGAQGGWLIGNGGQGGD 300 SGGRGGLLFGNGGNGSVGGMGGQGTNDTAGDSAGSGGLGGNGGNGAQGGWLIGNGGQGGD Sbjct 252 SGGRGGLLFGNGGNGSVGGMGGQGTNDTAGDSAGSGGLGGNGGNGAQGGWLIGNGGQGGD 311 Query 301 SGAGGGTDSTQTGVMNGASGGSAGIAGNGGDAGLVGNGGAGGNGGNGAAGSALGTTIFGG 360 SGAGGGTDSTQTGVMNGASGGSAGIAGNGGDAGLVGNGGAGGNGGNGAAGSALGTTIFGG Sbjct 312 SGAGGGTDSTQTGVMNGASGGSAGIAGNGGDAGLVGNGGAGGNGGNGAAGSALGTTIFGG 371 Query 361 SGGVGGSGGDGGNGGWLFGSGASGGNGGQGGDAGTNGFAGFGGSAGGGGWVGAVNFGPIS 420 SGGVGGSGGDGGNGGWLFGSGASGGNGGQGGDAGTNGFAGFGGSAGGGGWVGAVNFGPIS Sbjct 372 SGGVGGSGGDGGNGGWLFGSGASGGNGGQGGDAGTNGFAGFGGSAGGGGWVGAVNFGPIS 431 Query 421 VQGFGLFGHGGDGGNGGDVGAGSLSIQFGASGGDGGQGGVLYGNGGNGGNAGSGGGTGFE 480 VQGFGLFGHGGDGGNGGDVGAGSLSIQFGASGGDGGQGGVLYGNGGNGGNAGSGGGTGFE Sbjct 432 VQGFGLFGHGGDGGNGGDVGAGSLSIQFGASGGDGGQGGVLYGNGGNGGNAGSGGGTGFE 491 Query 481 GSAGQGGAAILIGNGGAGGNGATGGTGVGNIIQEAGGDGSDGGAGGSGGLLFGSGGAGGI 540 SAG GGAAILIGN GAGGNGATGGTGVGNIIQEAG D SDGGAGGSGGLLFGSGGAG I Sbjct 492 XSAGXGGAAILIGNXGAGGNGATGGTGVGNIIQEAGCDSSDGGAGGSGGLLFGSGGAGSI 551 Query 541 GGAGGVGGSGNDGGNGGDGGQGGASGLGIGNGGPGGSGGTGGAGGTGGSAGTGGAGGDGG 600 GGAG VG SGNDG NG DGGQGGASGLGIGN G GGSGGTGGAGGTGGSAGTGGAGGDGG Sbjct 552 GGAGSVGRSGNDGSNGSDGGQGGASGLGIGNRGLGGSGGTGGAGGTGGSAGTGGAGGDGG 611 Query 601 NAALLIGTGGDGGDGVPPAPGGQGGKGGLIGLPGQNGQP 639 NAALLIGTGGDGGDGVPPAPGGQGGKGGLIGLPGQNGQP Sbjct 612 NAALLIGTGGDGGDGVPPAPGGQGGKGGLIGLPGQNGQP 650 >gi|308402240|ref|ZP_07493532.2| putative PE family protein [Mycobacterium tuberculosis SUMu012] gi|308365979|gb|EFP54830.1| putative PE family protein [Mycobacterium tuberculosis SUMu012] Length=507 Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 131/189 (70%), Positives = 131/189 (70%), Gaps = 54/189 (28%) Query 1 VWTSQMIVAPAFVDAAAKDLATIGSAISRANAEALVPITALLPAGADDVSAAIAALFATH 60 VWTSQMIVAPAFVDAAAKDLATIGSAISRANAEALVPITALLPAGADDVSAAIAALFATH Sbjct 12 VWTSQMIVAPAFVDAAAKDLATIGSAISRANAEALVPITALLPAGADDVSAAIAALFATH 71 Query 61 GQAYQELSAHAVAFHEQFVQLMSAGAAQYASAEAANSSPLQIVGQTALDAINSPVQTLTG 120 GQAYQELSAHAVAFHEQFVQLMSAGAAQYASAEAANSSPLQIVGQTALDAINSPVQTLTG Sbjct 72 GQAYQELSAHAVAFHEQFVQLMSAGAAQYASAEAANSSPLQIVGQTALDAINSPVQTLTG 131 Query 121 RPLIGNGANGVAGTGQNGGDGGWLYGNGGNGGSGGTGQNGGNGGSAGLWGSGGNGGQGGA 180 RP L GNG Sbjct 132 RP---------------------LIGNG-------------------------------- 138 Query 181 GANGAAGQP 189 ANG AG Sbjct 139 -ANGVAGTG 146 Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 293/293 (100%), Positives = 293/293 (100%), Gaps = 0/293 (0%) Query 204 WIYGHGGHGGAGGNGGNATAPGGASAGFDGGAGGNGGSGGRGGLLFGNGGNGSVGGMGGQ 263 WIYGHGGHGGAGGNGGNATAPGGASAGFDGGAGGNGGSGGRGGLLFGNGGNGSVGGMGGQ Sbjct 215 WIYGHGGHGGAGGNGGNATAPGGASAGFDGGAGGNGGSGGRGGLLFGNGGNGSVGGMGGQ 274 Query 264 GTNDTAGDSAGSGGLGGNGGNGAQGGWLIGNGGQGGDSGAGGGTDSTQTGVMNGASGGSA 323 GTNDTAGDSAGSGGLGGNGGNGAQGGWLIGNGGQGGDSGAGGGTDSTQTGVMNGASGGSA Sbjct 275 GTNDTAGDSAGSGGLGGNGGNGAQGGWLIGNGGQGGDSGAGGGTDSTQTGVMNGASGGSA 334 Query 324 GIAGNGGDAGLVGNGGAGGNGGNGAAGSALGTTIFGGSGGVGGSGGDGGNGGWLFGSGAS 383 GIAGNGGDAGLVGNGGAGGNGGNGAAGSALGTTIFGGSGGVGGSGGDGGNGGWLFGSGAS Sbjct 335 GIAGNGGDAGLVGNGGAGGNGGNGAAGSALGTTIFGGSGGVGGSGGDGGNGGWLFGSGAS 394 Query 384 GGNGGQGGDAGTNGFAGFGGSAGGGGWVGAVNFGPISVQGFGLFGHGGDGGNGGDVGAGS 443 GGNGGQGGDAGTNGFAGFGGSAGGGGWVGAVNFGPISVQGFGLFGHGGDGGNGGDVGAGS Sbjct 395 GGNGGQGGDAGTNGFAGFGGSAGGGGWVGAVNFGPISVQGFGLFGHGGDGGNGGDVGAGS 454 Query 444 LSIQFGASGGDGGQGGVLYGNGGNGGNAGSGGGTGFEGSAGQGGAAILIGNGG 496 LSIQFGASGGDGGQGGVLYGNGGNGGNAGSGGGTGFEGSAGQGGAAILIGNGG Sbjct 455 LSIQFGASGGDGGQGGVLYGNGGNGGNAGSGGGTGFEGSAGQGGAAILIGNGG 507 >gi|306972131|ref|ZP_07484792.1| putative PE family protein [Mycobacterium tuberculosis SUMu010] gi|308358391|gb|EFP47242.1| putative PE family protein [Mycobacterium tuberculosis SUMu010] Length=558 Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 131/189 (70%), Positives = 131/189 (70%), Gaps = 54/189 (28%) Query 1 VWTSQMIVAPAFVDAAAKDLATIGSAISRANAEALVPITALLPAGADDVSAAIAALFATH 60 VWTSQMIVAPAFVDAAAKDLATIGSAISRANAEALVPITALLPAGADDVSAAIAALFATH Sbjct 12 VWTSQMIVAPAFVDAAAKDLATIGSAISRANAEALVPITALLPAGADDVSAAIAALFATH 71 Query 61 GQAYQELSAHAVAFHEQFVQLMSAGAAQYASAEAANSSPLQIVGQTALDAINSPVQTLTG 120 GQAYQELSAHAVAFHEQFVQLMSAGAAQYASAEAANSSPLQIVGQTALDAINSPVQTLTG Sbjct 72 GQAYQELSAHAVAFHEQFVQLMSAGAAQYASAEAANSSPLQIVGQTALDAINSPVQTLTG 131 Query 121 RPLIGNGANGVAGTGQNGGDGGWLYGNGGNGGSGGTGQNGGNGGSAGLWGSGGNGGQGGA 180 RP L GNG Sbjct 132 RP---------------------LIGNG-------------------------------- 138 Query 181 GANGAAGQP 189 ANG AG Sbjct 139 -ANGVAGTG 146 Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 311/311 (100%), Positives = 311/311 (100%), Gaps = 0/311 (0%) Query 204 WIYGHGGHGGAGGNGGNATAPGGASAGFDGGAGGNGGSGGRGGLLFGNGGNGSVGGMGGQ 263 WIYGHGGHGGAGGNGGNATAPGGASAGFDGGAGGNGGSGGRGGLLFGNGGNGSVGGMGGQ Sbjct 215 WIYGHGGHGGAGGNGGNATAPGGASAGFDGGAGGNGGSGGRGGLLFGNGGNGSVGGMGGQ 274 Query 264 GTNDTAGDSAGSGGLGGNGGNGAQGGWLIGNGGQGGDSGAGGGTDSTQTGVMNGASGGSA 323 GTNDTAGDSAGSGGLGGNGGNGAQGGWLIGNGGQGGDSGAGGGTDSTQTGVMNGASGGSA Sbjct 275 GTNDTAGDSAGSGGLGGNGGNGAQGGWLIGNGGQGGDSGAGGGTDSTQTGVMNGASGGSA 334 Query 324 GIAGNGGDAGLVGNGGAGGNGGNGAAGSALGTTIFGGSGGVGGSGGDGGNGGWLFGSGAS 383 GIAGNGGDAGLVGNGGAGGNGGNGAAGSALGTTIFGGSGGVGGSGGDGGNGGWLFGSGAS Sbjct 335 GIAGNGGDAGLVGNGGAGGNGGNGAAGSALGTTIFGGSGGVGGSGGDGGNGGWLFGSGAS 394 Query 384 GGNGGQGGDAGTNGFAGFGGSAGGGGWVGAVNFGPISVQGFGLFGHGGDGGNGGDVGAGS 443 GGNGGQGGDAGTNGFAGFGGSAGGGGWVGAVNFGPISVQGFGLFGHGGDGGNGGDVGAGS Sbjct 395 GGNGGQGGDAGTNGFAGFGGSAGGGGWVGAVNFGPISVQGFGLFGHGGDGGNGGDVGAGS 454 Query 444 LSIQFGASGGDGGQGGVLYGNGGNGGNAGSGGGTGFEGSAGQGGAAILIGNGGAGGNGAT 503 LSIQFGASGGDGGQGGVLYGNGGNGGNAGSGGGTGFEGSAGQGGAAILIGNGGAGGNGAT Sbjct 455 LSIQFGASGGDGGQGGVLYGNGGNGGNAGSGGGTGFEGSAGQGGAAILIGNGGAGGNGAT 514 Query 504 GGTGVGNIIQE 514 GGTGVGNIIQE Sbjct 515 GGTGVGNIIQE 525 >gi|167967402|ref|ZP_02549679.1| PE_PGRS family protein [Mycobacterium tuberculosis H37Ra] Length=604 Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 131/189 (70%), Positives = 131/189 (70%), Gaps = 54/189 (28%) Query 1 VWTSQMIVAPAFVDAAAKDLATIGSAISRANAEALVPITALLPAGADDVSAAIAALFATH 60 VWTSQMIVAPAFVDAAAKDLATIGSAISRANAEALVPITALLPAGADDVSAAIAALFATH Sbjct 12 VWTSQMIVAPAFVDAAAKDLATIGSAISRANAEALVPITALLPAGADDVSAAIAALFATH 71 Query 61 GQAYQELSAHAVAFHEQFVQLMSAGAAQYASAEAANSSPLQIVGQTALDAINSPVQTLTG 120 GQAYQELSAHAVAFHEQFVQLMSAGAAQYASAEAANSSPLQIVGQTALDAINSPVQTLTG Sbjct 72 GQAYQELSAHAVAFHEQFVQLMSAGAAQYASAEAANSSPLQIVGQTALDAINSPVQTLTG 131 Query 121 RPLIGNGANGVAGTGQNGGDGGWLYGNGGNGGSGGTGQNGGNGGSAGLWGSGGNGGQGGA 180 RP L GNG Sbjct 132 RP---------------------LIGNG-------------------------------- 138 Query 181 GANGAAGQP 189 ANG AG Sbjct 139 -ANGVAGTG 146 Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 311/311 (100%), Positives = 311/311 (100%), Gaps = 0/311 (0%) Query 204 WIYGHGGHGGAGGNGGNATAPGGASAGFDGGAGGNGGSGGRGGLLFGNGGNGSVGGMGGQ 263 WIYGHGGHGGAGGNGGNATAPGGASAGFDGGAGGNGGSGGRGGLLFGNGGNGSVGGMGGQ Sbjct 215 WIYGHGGHGGAGGNGGNATAPGGASAGFDGGAGGNGGSGGRGGLLFGNGGNGSVGGMGGQ 274 Query 264 GTNDTAGDSAGSGGLGGNGGNGAQGGWLIGNGGQGGDSGAGGGTDSTQTGVMNGASGGSA 323 GTNDTAGDSAGSGGLGGNGGNGAQGGWLIGNGGQGGDSGAGGGTDSTQTGVMNGASGGSA Sbjct 275 GTNDTAGDSAGSGGLGGNGGNGAQGGWLIGNGGQGGDSGAGGGTDSTQTGVMNGASGGSA 334 Query 324 GIAGNGGDAGLVGNGGAGGNGGNGAAGSALGTTIFGGSGGVGGSGGDGGNGGWLFGSGAS 383 GIAGNGGDAGLVGNGGAGGNGGNGAAGSALGTTIFGGSGGVGGSGGDGGNGGWLFGSGAS Sbjct 335 GIAGNGGDAGLVGNGGAGGNGGNGAAGSALGTTIFGGSGGVGGSGGDGGNGGWLFGSGAS 394 Query 384 GGNGGQGGDAGTNGFAGFGGSAGGGGWVGAVNFGPISVQGFGLFGHGGDGGNGGDVGAGS 443 GGNGGQGGDAGTNGFAGFGGSAGGGGWVGAVNFGPISVQGFGLFGHGGDGGNGGDVGAGS Sbjct 395 GGNGGQGGDAGTNGFAGFGGSAGGGGWVGAVNFGPISVQGFGLFGHGGDGGNGGDVGAGS 454 Query 444 LSIQFGASGGDGGQGGVLYGNGGNGGNAGSGGGTGFEGSAGQGGAAILIGNGGAGGNGAT 503 LSIQFGASGGDGGQGGVLYGNGGNGGNAGSGGGTGFEGSAGQGGAAILIGNGGAGGNGAT Sbjct 455 LSIQFGASGGDGGQGGVLYGNGGNGGNAGSGGGTGFEGSAGQGGAAILIGNGGAGGNGAT 514 Query 504 GGTGVGNIIQE 514 GGTGVGNIIQE Sbjct 515 GGTGVGNIIQE 525 >gi|118617772|ref|YP_906104.1| PE-PGRS family protein [Mycobacterium ulcerans Agy99] gi|118569882|gb|ABL04633.1| PE-PGRS family protein [Mycobacterium ulcerans Agy99] Length=636 Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 90/128 (71%), Positives = 99/128 (78%), Gaps = 0/128 (0%) Query 5 QMIVAPAFVDAAAKDLATIGSAISRANAEALVPITALLPAGADDVSAAIAALFATHGQAY 64 Q+ V PA V+ AA DLATIGS IS+ANA AL PIT LLPAG D+VSA IAALF HG AY Sbjct 5 QVTVVPAVVEMAANDLATIGSTISQANAAALAPITGLLPAGTDEVSAGIAALFEAHGNAY 64 Query 65 QELSAHAVAFHEQFVQLMSAGAAQYASAEAANSSPLQIVGQTALDAINSPVQTLTGRPLI 124 Q L A +A HEQFV+LMS GAAQYA+AEAAN+SPLQ V Q LD INSP LTGRPLI Sbjct 65 QTLGAQTLALHEQFVKLMSGGAAQYAAAEAANASPLQTVEQAVLDLINSPAVALTGRPLI 124 Query 125 GNGANGVA 132 GNGA+G A Sbjct 125 GNGADGAA 132 >gi|183983010|ref|YP_001851301.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183176336|gb|ACC41446.1| PE-PGRS family protein [Mycobacterium marinum M] Length=639 Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 90/128 (71%), Positives = 99/128 (78%), Gaps = 0/128 (0%) Query 5 QMIVAPAFVDAAAKDLATIGSAISRANAEALVPITALLPAGADDVSAAIAALFATHGQAY 64 Q+ V PA V+ AA DLATIGS IS+ANA AL PIT LLPAG D+VSA IAALF HG AY Sbjct 5 QVTVVPAVVEMAANDLATIGSTISQANAAALAPITGLLPAGTDEVSAGIAALFEAHGNAY 64 Query 65 QELSAHAVAFHEQFVQLMSAGAAQYASAEAANSSPLQIVGQTALDAINSPVQTLTGRPLI 124 Q L A +A HEQFV+LMS GAAQYA+AEAAN+SPLQ V Q LD INSP LTGRPLI Sbjct 65 QTLGAQTLALHEQFVKLMSGGAAQYAAAEAANASPLQTVEQAVLDLINSPAVALTGRPLI 124 Query 125 GNGANGVA 132 GNGA+G A Sbjct 125 GNGADGAA 132 >gi|183984531|ref|YP_001852822.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183177857|gb|ACC42967.1| PE-PGRS family protein [Mycobacterium marinum M] Length=569 Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 75/129 (59%), Positives = 93/129 (73%), Gaps = 4/129 (3%) Query 3 TSQMIVAPAFVDAAAKDLATIGSAISRANAEALVPITALLPAGADDVSAAIAALFATHGQ 62 S + AP V +AA DLA IGS+I+ A+ A P T +L AGAD++SAA+A +FA H Q Sbjct 1 MSYLFAAPELVASAATDLAGIGSSINAASVAAAAPTTGVLAAGADEISAAVAGMFAAHAQ 60 Query 63 AYQELSAHAVAFHEQFVQLMSAGAAQYASAEAANSSPLQIVGQTALDAINSPVQTLTGRP 122 AYQ LS A FH QFVQL+++GA+ Y AEAAN SPL Q ALDA+N+PVQ LTGRP Sbjct 61 AYQALSQQADTFHAQFVQLLNSGASAYTGAEAANVSPL----QQALDAVNAPVQQLTGRP 116 Query 123 LIGNGANGV 131 LIGNGA+G+ Sbjct 117 LIGNGADGI 125 >gi|183984157|ref|YP_001852448.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183177483|gb|ACC42593.1| PE-PGRS family protein [Mycobacterium marinum M] Length=683 Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 69/115 (60%), Positives = 85/115 (74%), Gaps = 0/115 (0%) Query 19 DLATIGSAISRANAEALVPITALLPAGADDVSAAIAALFATHGQAYQELSAHAVAFHEQF 78 DL IGS ++ AN A+ P T +L AGAD+VSAAIAA+F+ HGQAYQ LSA AFH++F Sbjct 17 DLVGIGSQLAAANTAAIGPTTTVLAAGADEVSAAIAAVFSGHGQAYQVLSAQVAAFHQRF 76 Query 79 VQLMSAGAAQYASAEAANSSPLQIVGQTALDAINSPVQTLTGRPLIGNGANGVAG 133 V+ ++AGA Y AEAAN++PLQ + Q AL IN+P Q L GRPLIGNGANG A Sbjct 77 VEALNAGAQSYVGAEAANATPLQTLEQDALGIINAPTQALVGRPLIGNGANGTAA 131 >gi|183982655|ref|YP_001850946.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183175981|gb|ACC41091.1| PE-PGRS family protein [Mycobacterium marinum M] Length=625 Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 70/113 (62%), Positives = 83/113 (74%), Gaps = 4/113 (3%) Query 18 KDLATIGSAISRANAEALVPITALLPAGADDVSAAIAALFATHGQAYQELSAHAVAFHEQ 77 DLA++GS+IS ANA A P ++L AGAD+VSA +AALF H QAYQ LSA A FHEQ Sbjct 16 TDLASVGSSISAANAAAAAPTMSVLAAGADEVSAVVAALFDAHAQAYQSLSAQAALFHEQ 75 Query 78 FVQLMSAGAAQYASAEAANSSPLQIVGQTALDAINSPVQTLTGRPLIGNGANG 130 FVQ ++AGA YA AEAA+ SPL Q AL+ IN+P Q L GRPLIGNGA+G Sbjct 76 FVQALNAGAGSYALAEAASVSPL----QDALNLINAPTQALFGRPLIGNGADG 124 >gi|183985312|ref|YP_001853603.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183178638|gb|ACC43748.1| PE-PGRS family protein [Mycobacterium marinum M] Length=846 Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 65/128 (51%), Positives = 90/128 (71%), Gaps = 1/128 (0%) Query 4 SQMIVAPAFVDAAAKDLATIGSAISRANAEALVPITALLPA-GADDVSAAIAALFATHGQ 62 S + +P ++AAA +++TIGS++ ANA A P TALL A GAD+VSAA+ A+F H Q Sbjct 2 SYVFASPEVLNAAAAEVSTIGSSLQTANASAAAPTTALLSALGADEVSAAVTAMFGNHAQ 61 Query 63 AYQELSAHAVAFHEQFVQLMSAGAAQYASAEAANSSPLQIVGQTALDAINSPVQTLTGRP 122 AYQ +S A FH++FV ++AGA Y+SAEA+ ++ LQ + Q L+ +N+P Q L GR Sbjct 62 AYQAVSTQAAEFHDRFVAALTAGADAYSSAEASTAATLQSLPQDLLNVVNAPTQALLGRA 121 Query 123 LIGNGANG 130 LIGNGANG Sbjct 122 LIGNGANG 129 >gi|183980964|ref|YP_001849255.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183174290|gb|ACC39400.1| PE-PGRS family protein [Mycobacterium marinum M] Length=1425 Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 89/161 (56%), Positives = 105/161 (66%), Gaps = 6/161 (3%) Query 4 SQMIVAPAFVDAAAKDLATIGSAISRANAEALVPITALLPAGADDVSAAIAALFATHGQA 63 S +V P + AAA DLA IG+AI + A T LLPA AD+VSAAIA+LF TH A Sbjct 2 SFTVVEPQMLTAAAADLAKIGAAIDTVSTAAAASTTNLLPAAADEVSAAIASLFGTHALA 61 Query 64 YQELSAHAVAFHEQFVQLMSAGAAQYASAEAANSSPLQIVGQTALDAINSPVQTLTGRPL 123 YQ + A A FH+ FVQ +S A++YA+ E AN V Q L IN+P Q L GRPL Sbjct 62 YQAIGAQAATFHDGFVQALSRAASRYAATEVAN------VEQNLLGLINAPTQALFGRPL 115 Query 124 IGNGANGVAGTGQNGGDGGWLYGNGGNGGSGGTGQNGGNGG 164 IGNGA+G AGTGQ G GG L+GNGG GGSG GQ+GG GG Sbjct 116 IGNGADGAAGTGQTGQAGGLLWGNGGAGGSGAPGQSGGTGG 156 >gi|183982972|ref|YP_001851263.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183176298|gb|ACC41408.1| PE-PGRS family protein [Mycobacterium marinum M] Length=609 Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 65/113 (58%), Positives = 79/113 (70%), Gaps = 1/113 (0%) Query 45 GADDVSAAIAALFATHGQAYQELSAHAVAFHEQFVQLMSAGAAQYASAEAANSSPLQIVG 104 GAD++SAAIA LF TH Q YQ +SA A+AFH+QF + +SA + YA+AEA N+ LQ V Sbjct 43 GADEISAAIAQLFGTHAQIYQRISAQAMAFHDQFARSLSAASGSYANAEATNTLTLQSVQ 102 Query 105 QTALDAINSPVQTLTGRPLIGNGANGVAGTGQNGGDGGWLYGNGGNGGSGGTG 157 Q L +N+P Q L GRPLIGNGANG A NG GG LYGNGG+G S +G Sbjct 103 QDLLGLVNAPTQALLGRPLIGNGANGTAA-DPNGEAGGLLYGNGGDGYSFTSG 154 >gi|183985012|ref|YP_001853303.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183178338|gb|ACC43448.1| PE-PGRS family protein [Mycobacterium marinum M] Length=1451 Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 74/127 (59%), Positives = 92/127 (73%), Gaps = 4/127 (3%) Query 4 SQMIVAPAFVDAAAKDLATIGSAISRANAEALVPITALLPAGADDVSAAIAALFATHGQA 63 S +I AP + +AA DLA I SA+S AN A VP T +L AGAD+VSAAIAALF H QA Sbjct 2 SYLIAAPELMQSAAADLAGIESALSAANVSAAVPTTQILAAGADEVSAAIAALFGAHAQA 61 Query 64 YQELSAHAVAFHEQFVQLMSAGAAQYASAEAANSSPLQIVGQTALDAINSPVQTLTGRPL 123 YQ L +H AFH++FVQ +++GAA YA+AEAA+ +PLQ + D +N+P Q L GRPL Sbjct 62 YQALGSHVTAFHQEFVQALNSGAASYANAEAASIAPLQALY----DLVNAPTQALLGRPL 117 Query 124 IGNGANG 130 IGNGANG Sbjct 118 IGNGANG 124 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 25/43 (59%), Positives = 32/43 (75%), Gaps = 0/43 (0%) Query 96 NSSPLQIVGQTALDAINSPVQTLTGRPLIGNGANGVAGTGQNG 138 ++SPL I+ Q L+AIN+P LTGRPLIGNG G AG+G +G Sbjct 772 STSPLHILQQQTLNAINAPFDALTGRPLIGNGTPGAAGSGADG 814 >gi|339298994|gb|AEJ51104.1| PE-PGRS family protein [Mycobacterium tuberculosis CCDC5180] Length=1657 Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 66/125 (53%), Positives = 87/125 (70%), Gaps = 4/125 (3%) Query 6 MIVAPAFVDAAAKDLATIGSAISRANAEALVPITALLPAGADDVSAAIAALFATHGQAYQ 65 MI P + AA DLA IGS +S A+A A +P T ++ AGAD+VSA IAALF+ H Q YQ Sbjct 1 MIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQEYQ 60 Query 66 ELSAHAVAFHEQFVQLMSAGAAQYASAEAANSSPLQIVGQTALDAINSPVQTLTGRPLIG 125 LSA A AFH+QFV ++A A Y + E AN++ +++V L A+N+P QTL GRPLIG Sbjct 61 ALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVV----LGAVNAPTQTLLGRPLIG 116 Query 126 NGANG 130 +GA+G Sbjct 117 DGAHG 121 >gi|289553720|ref|ZP_06442930.1| LOW QUALITY PROTEIN: predicted protein [Mycobacterium tuberculosis KZN 605] gi|289438352|gb|EFD20845.1| LOW QUALITY PROTEIN: predicted protein [Mycobacterium tuberculosis KZN 605] Length=1323 Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 66/127 (52%), Positives = 88/127 (70%), Gaps = 4/127 (3%) Query 4 SQMIVAPAFVDAAAKDLATIGSAISRANAEALVPITALLPAGADDVSAAIAALFATHGQA 63 S +I P + AA DLA IGS +S A+A A +P T ++ AGAD+VSA IAALF+ H Q Sbjct 7 SYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQE 66 Query 64 YQELSAHAVAFHEQFVQLMSAGAAQYASAEAANSSPLQIVGQTALDAINSPVQTLTGRPL 123 YQ LSA A AFH+QFV ++A A Y + E AN++ +++V L A+N+P QTL GRPL Sbjct 67 YQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVV----LGAVNAPTQTLLGRPL 122 Query 124 IGNGANG 130 IG+GA+G Sbjct 123 IGDGAHG 129 >gi|15842017|ref|NP_337054.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] gi|13882294|gb|AAK46868.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] Length=1665 Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 66/127 (52%), Positives = 88/127 (70%), Gaps = 4/127 (3%) Query 4 SQMIVAPAFVDAAAKDLATIGSAISRANAEALVPITALLPAGADDVSAAIAALFATHGQA 63 S +I P + AA DLA IGS +S A+A A +P T ++ AGAD+VSA IAALF+ H Q Sbjct 7 SYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQE 66 Query 64 YQELSAHAVAFHEQFVQLMSAGAAQYASAEAANSSPLQIVGQTALDAINSPVQTLTGRPL 123 YQ LSA A AFH+QFV ++A A Y + E AN++ +++V L A+N+P QTL GRPL Sbjct 67 YQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVV----LGAVNAPTQTLLGRPL 122 Query 124 IGNGANG 130 IG+GA+G Sbjct 123 IGDGAHG 129 >gi|339632516|ref|YP_004724158.1| PE-PGRS family protein [Mycobacterium africanum GM041182] gi|339331872|emb|CCC27575.1| PE-PGRS family protein [Mycobacterium africanum GM041182] Length=1657 Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 66/127 (52%), Positives = 88/127 (70%), Gaps = 4/127 (3%) Query 4 SQMIVAPAFVDAAAKDLATIGSAISRANAEALVPITALLPAGADDVSAAIAALFATHGQA 63 S +I P + AA DLA IGS +S A+A A +P T ++ AGAD+VSA IAALF+ H Q Sbjct 2 SYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQE 61 Query 64 YQELSAHAVAFHEQFVQLMSAGAAQYASAEAANSSPLQIVGQTALDAINSPVQTLTGRPL 123 YQ LSA A AFH+QFV ++A A Y + E AN++ +++V L A+N+P QTL GRPL Sbjct 62 YQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVV----LGAVNAPTQTLLGRPL 117 Query 124 IGNGANG 130 IG+GA+G Sbjct 118 IGDGAHG 124 >gi|344220317|gb|AEN00948.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2] Length=1644 Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 66/127 (52%), Positives = 88/127 (70%), Gaps = 4/127 (3%) Query 4 SQMIVAPAFVDAAAKDLATIGSAISRANAEALVPITALLPAGADDVSAAIAALFATHGQA 63 S +I P + AA DLA IGS +S A+A A +P T ++ AGAD+VSA IAALF+ H Q Sbjct 2 SYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQE 61 Query 64 YQELSAHAVAFHEQFVQLMSAGAAQYASAEAANSSPLQIVGQTALDAINSPVQTLTGRPL 123 YQ LSA A AFH+QFV ++A A Y + E AN++ +++V L A+N+P QTL GRPL Sbjct 62 YQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVV----LGAVNAPTQTLLGRPL 117 Query 124 IGNGANG 130 IG+GA+G Sbjct 118 IGDGAHG 124 >gi|289552831|ref|ZP_06442041.1| LOW QUALITY PROTEIN: predicted protein [Mycobacterium tuberculosis KZN 605] gi|289437463|gb|EFD19956.1| LOW QUALITY PROTEIN: predicted protein [Mycobacterium tuberculosis KZN 605] Length=998 Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 65/127 (52%), Positives = 82/127 (65%), Gaps = 7/127 (5%) Query 4 SQMIVAPAFVDAAAKDLATIGSAISRANAEALVPITALLPAGADDVSAAIAALFATHGQA 63 S +I P + AA DLA IGS I+ AN A + +LPA AD+VS A+AALF TH Q Sbjct 2 SFVIATPEMLTTAATDLAKIGSTITAANTAAAA-VAKVLPASADEVSVAVAALFGTHAQE 60 Query 64 YQELSAHAVAFHEQFVQLMSAGAAQYASAEAANSSPLQIVGQTALDAINSPVQTLTGRPL 123 YQ +SA FH++FVQ +SA A+ Y +AEA N V Q+ L A+N+P Q L GRPL Sbjct 61 YQTVSAQVATFHDRFVQTLSATASSYVAAEAVN------VEQSLLAAVNAPTQALFGRPL 114 Query 124 IGNGANG 130 IGNGA+G Sbjct 115 IGNGADG 121 >gi|253797511|ref|YP_003030512.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435] gi|253319014|gb|ACT23617.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435] gi|328457295|gb|AEB02718.1| hypothetical protein TBSG_00589 [Mycobacterium tuberculosis KZN 4207] gi|344218399|gb|AEM99029.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2] Length=1303 Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 65/127 (52%), Positives = 82/127 (65%), Gaps = 7/127 (5%) Query 4 SQMIVAPAFVDAAAKDLATIGSAISRANAEALVPITALLPAGADDVSAAIAALFATHGQA 63 S +I P + AA DLA IGS I+ AN A + +LPA AD+VS A+AALF TH Q Sbjct 2 SFVIATPEMLTTAATDLAKIGSTITAANTAAAA-VAKVLPASADEVSVAVAALFGTHAQE 60 Query 64 YQELSAHAVAFHEQFVQLMSAGAAQYASAEAANSSPLQIVGQTALDAINSPVQTLTGRPL 123 YQ +SA FH++FVQ +SA A+ Y +AEA N V Q+ L A+N+P Q L GRPL Sbjct 61 YQTVSAQVATFHDRFVQTLSATASSYVAAEAVN------VEQSLLAAVNAPTQALFGRPL 114 Query 124 IGNGANG 130 IGNGA+G Sbjct 115 IGNGADG 121 >gi|57116996|ref|YP_177887.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv] gi|148662325|ref|YP_001283848.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] gi|7441223|pir||A70869 hypothetical glycine-rich protein Rv2490c - Mycobacterium tuberculosis (strain H37RV) gi|41353424|emb|CAE55496.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv] gi|148506477|gb|ABQ74286.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] Length=1660 Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 66/127 (52%), Positives = 88/127 (70%), Gaps = 4/127 (3%) Query 4 SQMIVAPAFVDAAAKDLATIGSAISRANAEALVPITALLPAGADDVSAAIAALFATHGQA 63 S +I P + AA DLA IGS +S A+A A +P T ++ AGAD+VSA IAALF+ H Q Sbjct 2 SYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQE 61 Query 64 YQELSAHAVAFHEQFVQLMSAGAAQYASAEAANSSPLQIVGQTALDAINSPVQTLTGRPL 123 YQ LSA A AFH+QFV ++A A Y + E AN++ +++V L A+N+P QTL GRPL Sbjct 62 YQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVV----LGAVNAPTQTLLGRPL 117 Query 124 IGNGANG 130 IG+GA+G Sbjct 118 IGDGAHG 124 >gi|253798432|ref|YP_003031433.1| hypothetical protein TBMG_04024 [Mycobacterium tuberculosis KZN 1435] gi|253319935|gb|ACT24538.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 1435] gi|328458200|gb|AEB03623.1| hypothetical protein TBSG_01494 [Mycobacterium tuberculosis KZN 4207] Length=1616 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 66/127 (52%), Positives = 88/127 (70%), Gaps = 4/127 (3%) Query 4 SQMIVAPAFVDAAAKDLATIGSAISRANAEALVPITALLPAGADDVSAAIAALFATHGQA 63 S +I P + AA DLA IGS +S A+A A +P T ++ AGAD+VSA IAALF+ H Q Sbjct 2 SYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQE 61 Query 64 YQELSAHAVAFHEQFVQLMSAGAAQYASAEAANSSPLQIVGQTALDAINSPVQTLTGRPL 123 YQ LSA A AFH+QFV ++A A Y + E AN++ +++V L A+N+P QTL GRPL Sbjct 62 YQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVV----LGAVNAPTQTLLGRPL 117 Query 124 IGNGANG 130 IG+GA+G Sbjct 118 IGDGAHG 124 >gi|183982067|ref|YP_001850358.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183175393|gb|ACC40503.1| PE-PGRS family protein [Mycobacterium marinum M] Length=737 Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 76/143 (54%), Positives = 95/143 (67%), Gaps = 2/143 (1%) Query 3 TSQMIVAPAFVDAAAKDLATIGSAISRANAEALVPITALLPAGADDVSAAIAALFATHGQ 62 S +I AP + AA DLA IG+A+ AN A PIT +L AGADD+SAA+AALF+ H Sbjct 1 MSYVIAAPEMLAGAATDLAGIGAALQSANGAAAAPITGVLAAGADDISAAVAALFSGHAL 60 Query 63 AYQELSAHAVAFHEQFVQLMSAGAAQYASAEAANSSPLQIVGQTALDAINSPVQTLTGRP 122 YQ LS FH+QFV +++ A YA+AEAA+++PLQ V Q L IN+P Q L GRP Sbjct 61 DYQALSTQMAGFHQQFVTALNSAGASYAAAEAASANPLQAVEQQLLGVINAPTQALLGRP 120 Query 123 LIGNGANGVAGTGQNGGDGGWLY 145 LIG+G G GQNGGDGG L+ Sbjct 121 LIGDGTAG--APGQNGGDGGLLW 141 Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 31/52 (60%), Positives = 38/52 (74%), Gaps = 2/52 (3%) Query 94 AANSSPLQIVGQTALDAINSPVQTLTGRPLIGNGANGVAGTGQNGGDGGWLY 145 +A+++PL V Q L AIN+P Q L GRPLIG+GA G A GQNGGDGG L+ Sbjct 400 SASAAPLYAVEQQVLGAINAPTQALLGRPLIGDGATGAA--GQNGGDGGLLW 449 >gi|183981230|ref|YP_001849521.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183174556|gb|ACC39666.1| PE-PGRS family protein [Mycobacterium marinum M] Length=963 Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 65/124 (53%), Positives = 82/124 (67%), Gaps = 4/124 (3%) Query 6 MIVAPAFVDAAAKDLATIGSAISRANAEALVPITALLPAGADDVSAAIAALFATHGQAYQ 65 ++VAP V AAA DLA IGSAI+ AN P LL AG D+VS AIA+LF+ H YQ Sbjct 4 VLVAPEMVTAAASDLANIGSAINTANTAVAAPTAELLAAGTDEVSEAIASLFSGHALDYQ 63 Query 66 ELSAHAVAFHEQFVQLMSAGAAQYASAEAANSSPLQIVGQTALDAINSPVQTLTGRPLIG 125 L A AFH+QFV ++AG Y+SAEAA ++PL Q L+ +N+P Q L GRPLIG Sbjct 64 SLGARMTAFHDQFVAALTAGGGLYSSAEAAAATPL----QDLLNVVNAPTQALLGRPLIG 119 Query 126 NGAN 129 +GA+ Sbjct 120 DGAD 123 >gi|183982971|ref|YP_001851262.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183176297|gb|ACC41407.1| PE-PGRS family protein [Mycobacterium marinum M] Length=675 Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 56/94 (60%), Positives = 68/94 (73%), Gaps = 0/94 (0%) Query 45 GADDVSAAIAALFATHGQAYQELSAHAVAFHEQFVQLMSAGAAQYASAEAANSSPLQIVG 104 GAD++SAAIA LF TH Q YQ +SA A+AFH+QF + +SA + YA+AEA N+ LQ V Sbjct 43 GADEISAAIAQLFGTHAQIYQRISAQAMAFHDQFARSLSAASGSYANAEATNTLTLQSVQ 102 Query 105 QTALDAINSPVQTLTGRPLIGNGANGVAGTGQNG 138 Q L +N+P Q L GRPLIGNGANG GTG NG Sbjct 103 QDLLGLVNAPTQALLGRPLIGNGANGAPGTGANG 136 >gi|340625989|ref|YP_004744441.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] gi|340004179|emb|CCC43318.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] Length=1081 Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 63/127 (50%), Positives = 79/127 (63%), Gaps = 1/127 (0%) Query 4 SQMIVAPAFVDAAAKDLATIGSAISRANAEALVPITALLPAGADDVSAAIAALFATHGQA 63 S ++ AP + +AA DL I S IS ANA A V TAL PA AD+VSAAIAALF+++ + Sbjct 2 SFVVTAPPVLASAASDLGGIASMISEANAMAAVRTTALAPAAADEVSAAIAALFSSYARD 61 Query 64 YQELSAHAVAFHEQFVQLMSAGAAQYASAEAANSSPLQIVGQTALDAINSPVQTLTGRPL 123 YQ LS AFH QFVQ ++ YA + N L+ Q L IN+P QTL GRPL Sbjct 62 YQTLSVQVTAFHVQFVQTLTNAGQLYAVVDVGNGVLLK-TEQQVLGVINAPTQTLLGRPL 120 Query 124 IGNGANG 130 IG+G +G Sbjct 121 IGDGTHG 127 >gi|121637380|ref|YP_977603.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224989855|ref|YP_002644542.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|121493027|emb|CAL71498.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224772968|dbj|BAH25774.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|341601399|emb|CCC64072.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=1399 Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 79/146 (55%), Positives = 100/146 (69%), Gaps = 0/146 (0%) Query 4 SQMIVAPAFVDAAAKDLATIGSAISRANAEALVPITALLPAGADDVSAAIAALFATHGQA 63 S +IVAP V AAA D+A IGS+I AN+ A T++L AGAD+VSAAIA LF +H + Sbjct 2 SLVIVAPETVAAAALDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHARE 61 Query 64 YQELSAHAVAFHEQFVQLMSAGAAQYASAEAANSSPLQIVGQTALDAINSPVQTLTGRPL 123 YQ +S AFH++F Q +SA Y SAEA N++PL + L+A+N+P Q L GRPL Sbjct 62 YQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRPL 121 Query 124 IGNGANGVAGTGQNGGDGGWLYGNGG 149 IG+GA G GTGQ GG GG L+GNGG Sbjct 122 IGDGAAGAPGTGQAGGAGGILWGNGG 147 >gi|339631517|ref|YP_004723159.1| PE-PGRS family protein [Mycobacterium africanum GM041182] gi|339330873|emb|CCC26544.1| PE-PGRS family protein [Mycobacterium africanum GM041182] Length=1389 Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 79/146 (55%), Positives = 100/146 (69%), Gaps = 0/146 (0%) Query 4 SQMIVAPAFVDAAAKDLATIGSAISRANAEALVPITALLPAGADDVSAAIAALFATHGQA 63 S +IVAP V AAA D+A IGS+I AN+ A T++L AGAD+VSAAIA LF +H + Sbjct 2 SLVIVAPETVAAAALDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHARE 61 Query 64 YQELSAHAVAFHEQFVQLMSAGAAQYASAEAANSSPLQIVGQTALDAINSPVQTLTGRPL 123 YQ +S AFH++F Q +SA Y SAEA N++PL + L+A+N+P Q L GRPL Sbjct 62 YQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRPL 121 Query 124 IGNGANGVAGTGQNGGDGGWLYGNGG 149 IG+GA G GTGQ GG GG L+GNGG Sbjct 122 IGDGAAGAPGTGQAGGAGGILWGNGG 147 >gi|183982114|ref|YP_001850405.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183175440|gb|ACC40550.1| PE-PGRS family protein [Mycobacterium marinum M] Length=1397 Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 66/122 (55%), Positives = 81/122 (67%), Gaps = 6/122 (4%) Query 8 VAPAFVDAAAKDLATIGSAISRANAEALVPITALLPAGADDVSAAIAALFATHGQAYQEL 67 V P V AAA DL+ I SAI++AN+ A T +LPA AD+VSAAIAALF TH Q YQ + Sbjct 6 VTPEMVVAAASDLSGINSAIAQANSVAAAATTTVLPAAADEVSAAIAALFGTHAQQYQAI 65 Query 68 SAHAVAFHEQFVQLMSAGAAQYASAEAANSSPLQIVGQTALDAINSPVQTLTGRPLIGNG 127 SA AFH++FVQ ++ GA Y AEAAN+ Q L +N+P Q L GRPLIG+G Sbjct 66 SAELAAFHDRFVQSLNTGAGSYLRAEAANAE------QGLLGLVNAPTQALFGRPLIGDG 119 Query 128 AN 129 AN Sbjct 120 AN 121 >gi|31792644|ref|NP_855137.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97] gi|31618234|emb|CAD96152.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97] Length=1408 Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 79/146 (55%), Positives = 100/146 (69%), Gaps = 0/146 (0%) Query 4 SQMIVAPAFVDAAAKDLATIGSAISRANAEALVPITALLPAGADDVSAAIAALFATHGQA 63 S +IVAP V AAA D+A IGS+I AN+ A T++L AGAD+VSAAIA LF +H + Sbjct 2 SLVIVAPETVAAAALDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHARE 61 Query 64 YQELSAHAVAFHEQFVQLMSAGAAQYASAEAANSSPLQIVGQTALDAINSPVQTLTGRPL 123 YQ +S AFH++F Q +SA Y SAEA N++PL + L+A+N+P Q L GRPL Sbjct 62 YQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRPL 121 Query 124 IGNGANGVAGTGQNGGDGGWLYGNGG 149 IG+GA G GTGQ GG GG L+GNGG Sbjct 122 IGDGAAGAPGTGQAGGAGGILWGNGG 147 >gi|183982116|ref|YP_001850407.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183175442|gb|ACC40552.1| PE-PGRS family protein [Mycobacterium marinum M] Length=1386 Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 62/118 (53%), Positives = 73/118 (62%), Gaps = 0/118 (0%) Query 8 VAPAFVDAAAKDLATIGSAISRANAEALVPITALLPAGADDVSAAIAALFATHGQAYQEL 67 VAP V AA DL +GS IS AN A T +L AGAD+VSA IAALF TH YQ + Sbjct 6 VAPEMVAVAASDLERLGSTISAANVAAAGSTTTILAAGADEVSAVIAALFGTHALEYQAI 65 Query 68 SAHAVAFHEQFVQLMSAGAAQYASAEAANSSPLQIVGQTALDAINSPVQTLTGRPLIG 125 S FHEQFVQ ++ G Y++AE N PLQ V Q L+ +N+P Q L GRPLIG Sbjct 66 STQLSVFHEQFVQTLTNGVGAYSAAELVNVLPLQNVEQDLLNLVNAPTQALFGRPLIG 123 >gi|183982130|ref|YP_001850421.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183175456|gb|ACC40566.1| PE-PGRS family protein [Mycobacterium marinum M] Length=710 Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 64/130 (50%), Positives = 81/130 (63%), Gaps = 0/130 (0%) Query 2 WTSQMIVAPAFVDAAAKDLATIGSAISRANAEALVPITALLPAGADDVSAAIAALFATHG 61 +S +I P F+ AAA DL+ IG A+ A A TA+ P D+VSAA+ +F + Sbjct 1 MSSFVIATPEFLTAAANDLSGIGDAVRAATGAAAPSTTAIAPLAGDEVSAAVTRMFGAYA 60 Query 62 QAYQELSAHAVAFHEQFVQLMSAGAAQYASAEAANSSPLQIVGQTALDAINSPVQTLTGR 121 Q +Q LSA FH FV+ + GA Y+ AEAAN+SPLQ + Q L IN+P Q LTGR Sbjct 61 QEFQTLSARMEQFHTDFVRALLTGAGAYSGAEAANASPLQTLEQDLLAGINAPSQMLTGR 120 Query 122 PLIGNGANGV 131 PLIGNGANGV Sbjct 121 PLIGNGANGV 130 >gi|183982495|ref|YP_001850786.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183175821|gb|ACC40931.1| PE-PGRS family protein [Mycobacterium marinum M] Length=681 Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 68/126 (54%), Positives = 87/126 (70%), Gaps = 4/126 (3%) Query 4 SQMIVAPAFVDAAAKDLATIGSAISRANAEALVPITALLPAGADDVSAAIAALFATHGQA 63 S +I AP + AAA D+ATIGS IS A+A A P T++L A AD+VS AIA LF+ H + Sbjct 2 SFLIAAPEMLTAAAADIATIGSTISAADAIAAAPTTSVLAAAADEVSLAIAGLFSAHAKQ 61 Query 64 YQELSAHAVAFHEQFVQLMSAGAAQYASAEAANSSPLQIVGQTALDAINSPVQTLTGRPL 123 YQ S A FHEQ V+ ++AG YA+AEAAN+SPL+ + LDA+N+P QTL GR L Sbjct 62 YQAFSVQAATFHEQLVRSLAAGGFSYATAEAANASPLEFL----LDAVNAPTQTLFGRDL 117 Query 124 IGNGAN 129 IGNG + Sbjct 118 IGNGTD 123 >gi|183981460|ref|YP_001849751.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183174786|gb|ACC39896.1| PE-PGRS family protein [Mycobacterium marinum M] Length=1483 Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 63/122 (52%), Positives = 81/122 (67%), Gaps = 6/122 (4%) Query 8 VAPAFVDAAAKDLATIGSAISRANAEALVPITALLPAGADDVSAAIAALFATHGQAYQEL 67 VAP V AA +DLA IGS+IS ANA A+ T ++PA AD+VSAAIAALF +H + YQ + Sbjct 6 VAPEMVAAAVEDLAGIGSSISAANAAAVALTTDVVPAAADEVSAAIAALFGSHAREYQAI 65 Query 68 SAHAVAFHEQFVQLMSAGAAQYASAEAANSSPLQIVGQTALDAINSPVQTLTGRPLIGNG 127 SA + AFHE+ VQ + +GA+ Y E AN+ Q L+A+N P Q GRPLIGNG Sbjct 66 SAQSAAFHERLVQTLRSGASAYLGTELANAQ------QNLLNAVNGPTQAWLGRPLIGNG 119 Query 128 AN 129 + Sbjct 120 TD 121 >gi|57116908|ref|YP_177832.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv] gi|148661576|ref|YP_001283099.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] gi|148822983|ref|YP_001287737.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] 19 more sequence titles Length=618 Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 77/129 (60%), Positives = 90/129 (70%), Gaps = 3/129 (2%) Query 3 TSQMIVAPAFVDAAAKDLATIGSAISRANAEALVPITALLPAGADDVSAAIAALFATHGQ 62 S ++V P V AAA DLA IGS+IS ANA A P TAL+ AG D+VSAAIAALF H + Sbjct 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 Query 63 AYQELSAHAVAFHEQFVQLMSAGAAQYASAEAANSSPLQIVGQTALDAINSPVQTLTGRP 122 AYQ LSA A FHEQFV+ ++AG YA AEAA + Q V Q L+ IN+P Q L GRP Sbjct 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATA---QSVQQDLLNLINAPTQALLGRP 117 Query 123 LIGNGANGV 131 LIGNGANG+ Sbjct 118 LIGNGANGL 126 >gi|339631822|ref|YP_004723464.1| PE-PGRS family protein [Mycobacterium africanum GM041182] gi|339331178|emb|CCC26860.1| PE-PGRS family protein [Mycobacterium africanum GM041182] Length=632 Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 77/129 (60%), Positives = 90/129 (70%), Gaps = 3/129 (2%) Query 3 TSQMIVAPAFVDAAAKDLATIGSAISRANAEALVPITALLPAGADDVSAAIAALFATHGQ 62 S ++V P V AAA DLA IGS+IS ANA A P TAL+ AG D+VSAAIAALF H + Sbjct 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 Query 63 AYQELSAHAVAFHEQFVQLMSAGAAQYASAEAANSSPLQIVGQTALDAINSPVQTLTGRP 122 AYQ LSA A FHEQFV+ ++AG YA AEAA + Q V Q L+ IN+P Q L GRP Sbjct 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATA---QSVQQDLLNLINAPTQALLGRP 117 Query 123 LIGNGANGV 131 LIGNGANG+ Sbjct 118 LIGNGANGL 126 >gi|289569833|ref|ZP_06450060.1| PE-PGRS family protein [Mycobacterium tuberculosis T17] gi|340626780|ref|YP_004745232.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] gi|289543587|gb|EFD47235.1| PE-PGRS family protein [Mycobacterium tuberculosis T17] gi|340004970|emb|CCC44118.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] Length=624 Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 77/129 (60%), Positives = 90/129 (70%), Gaps = 3/129 (2%) Query 3 TSQMIVAPAFVDAAAKDLATIGSAISRANAEALVPITALLPAGADDVSAAIAALFATHGQ 62 S ++V P V AAA DLA IGS+IS ANA A P TAL+ AG D+VSAAIAALF H + Sbjct 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 Query 63 AYQELSAHAVAFHEQFVQLMSAGAAQYASAEAANSSPLQIVGQTALDAINSPVQTLTGRP 122 AYQ LSA A FHEQFV+ ++AG YA AEAA + Q V Q L+ IN+P Q L GRP Sbjct 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATA---QSVQQDLLNLINAPTQALLGRP 117 Query 123 LIGNGANGV 131 LIGNGANG+ Sbjct 118 LIGNGANGL 126 >gi|31792957|ref|NP_855450.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97] gi|224990154|ref|YP_002644841.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|31618548|emb|CAD94500.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97] gi|224773267|dbj|BAH26073.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|341601697|emb|CCC64370.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis BCG str. Moreau RDJ] Length=624 Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 77/129 (60%), Positives = 90/129 (70%), Gaps = 3/129 (2%) Query 3 TSQMIVAPAFVDAAAKDLATIGSAISRANAEALVPITALLPAGADDVSAAIAALFATHGQ 62 S ++V P V AAA DLA IGS+IS ANA A P TAL+ AG D+VSAAIAALF H + Sbjct 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 Query 63 AYQELSAHAVAFHEQFVQLMSAGAAQYASAEAANSSPLQIVGQTALDAINSPVQTLTGRP 122 AYQ LSA A FHEQFV+ ++AG YA AEAA + Q V Q L+ IN+P Q L GRP Sbjct 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATA---QSVQQDLLNLINAPTQALLGRP 117 Query 123 LIGNGANGV 131 LIGNGANG+ Sbjct 118 LIGNGANGL 126 >gi|289447383|ref|ZP_06437127.1| PE-PGRS family protein [Mycobacterium tuberculosis CPHL_A] gi|289420341|gb|EFD17542.1| PE-PGRS family protein [Mycobacterium tuberculosis CPHL_A] Length=592 Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 77/129 (60%), Positives = 90/129 (70%), Gaps = 3/129 (2%) Query 3 TSQMIVAPAFVDAAAKDLATIGSAISRANAEALVPITALLPAGADDVSAAIAALFATHGQ 62 S ++V P V AAA DLA IGS+IS ANA A P TAL+ AG D+VSAAIAALF H + Sbjct 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 Query 63 AYQELSAHAVAFHEQFVQLMSAGAAQYASAEAANSSPLQIVGQTALDAINSPVQTLTGRP 122 AYQ LSA A FHEQFV+ ++AG YA AEAA + Q V Q L+ IN+P Q L GRP Sbjct 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATA---QSVQQDLLNLINAPTQALLGRP 117 Query 123 LIGNGANGV 131 LIGNGANG+ Sbjct 118 LIGNGANGL 126 >gi|121636997|ref|YP_977220.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|121492644|emb|CAL71113.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|341601013|emb|CCC63685.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=730 Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 65/131 (50%), Positives = 82/131 (63%), Gaps = 6/131 (4%) Query 3 TSQMIVAPAFVDAAAKDLATIGSAISRANAEALVPITALLPAGADDVSAAIAALFATHGQ 62 S MI P + +AA DLA+IGS+I+ + A T LLPA AD+VSA IAALF+ HG+ Sbjct 1 MSYMIAVPDMLSSAAGDLASIGSSINASTRAAAAATTRLLPAAADEVSAHIAALFSGHGE 60 Query 63 AYQELSAHAVAFHEQFVQLMSAGAAQYASAEAANSSPLQIVGQTALDAINSPVQTLTGRP 122 YQ ++ AFH+QF +++ A YASAEA N V Q L IN+P Q L GRP Sbjct 61 GYQAIARQMAAFHDQFTLALTSSAGAYASAEATN------VEQQVLGLINAPTQALWGRP 114 Query 123 LIGNGANGVAG 133 LIGNGA+G A Sbjct 115 LIGNGADGTAA 125 >gi|339631132|ref|YP_004722774.1| PE-PGRS family protein [Mycobacterium africanum GM041182] gi|339330488|emb|CCC26153.1| PE-PGRS family protein [Mycobacterium africanum GM041182] Length=772 Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 65/131 (50%), Positives = 82/131 (63%), Gaps = 6/131 (4%) Query 3 TSQMIVAPAFVDAAAKDLATIGSAISRANAEALVPITALLPAGADDVSAAIAALFATHGQ 62 S MI P + +AA DLA+IGS+I+ + A T LLPA AD+VSA IAALF+ HG+ Sbjct 7 MSYMIAVPDMLSSAAGDLASIGSSINASTRAAAAATTRLLPAAADEVSAHIAALFSGHGE 66 Query 63 AYQELSAHAVAFHEQFVQLMSAGAAQYASAEAANSSPLQIVGQTALDAINSPVQTLTGRP 122 YQ ++ AFH+QF +++ A YASAEA N V Q L IN+P Q L GRP Sbjct 67 GYQAIARQMAAFHDQFTLALTSSAGAYASAEATN------VEQQVLGLINAPTQALLGRP 120 Query 123 LIGNGANGVAG 133 LIGNGA+G A Sbjct 121 LIGNGADGTAA 131 >gi|340626105|ref|YP_004744557.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] gi|340004295|emb|CCC43436.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] Length=856 Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 77/126 (62%), Positives = 88/126 (70%), Gaps = 0/126 (0%) Query 4 SQMIVAPAFVDAAAKDLATIGSAISRANAEALVPITALLPAGADDVSAAIAALFATHGQA 63 S +I AP + A A DLA IGSA++ ANA L P T LL AGAD+VS+AIAALF HGQA Sbjct 2 SFVIAAPEALVAVASDLAGIGSALAEANAAVLAPTTGLLAAGADEVSSAIAALFGAHGQA 61 Query 64 YQELSAHAVAFHEQFVQLMSAGAAQYASAEAANSSPLQIVGQTALDAINSPVQTLTGRPL 123 YQ +SA A AFH QFVQ ++ G YA+AEAAN S Q V Q LD IN P Q L GRPL Sbjct 62 YQTVSAQASAFHAQFVQALTGGGGAYAAAEAANVSAAQSVDQRLLDLINGPTQALLGRPL 121 Query 124 IGNGAN 129 IG+GAN Sbjct 122 IGDGAN 127 >gi|340626079|ref|YP_004744531.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] gi|340004269|emb|CCC43410.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] Length=767 Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 64/131 (49%), Positives = 82/131 (63%), Gaps = 6/131 (4%) Query 3 TSQMIVAPAFVDAAAKDLATIGSAISRANAEALVPITALLPAGADDVSAAIAALFATHGQ 62 S MI P + +AA DLA+IGS+I+ + A T LLPA AD+VSA IAALF+ HG+ Sbjct 1 MSYMIAVPDMLSSAAGDLASIGSSINASTRAAAAATTRLLPAAADEVSAHIAALFSGHGE 60 Query 63 AYQELSAHAVAFHEQFVQLMSAGAAQYASAEAANSSPLQIVGQTALDAINSPVQTLTGRP 122 YQ ++ AFH+QF +++ A YASAEA N V Q L IN+P Q L GRP Sbjct 61 GYQAIARQMAAFHDQFTLALTSSAGAYASAEATN------VEQQVLGLINAPTQALLGRP 114 Query 123 LIGNGANGVAG 133 L+GNGA+G A Sbjct 115 LVGNGADGTAA 125 >gi|15840909|ref|NP_335946.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] gi|13881112|gb|AAK45760.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] Length=1408 Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 80/146 (55%), Positives = 100/146 (69%), Gaps = 0/146 (0%) Query 4 SQMIVAPAFVDAAAKDLATIGSAISRANAEALVPITALLPAGADDVSAAIAALFATHGQA 63 S +IVAP V AAA D+A IGS+I ANA A T++L AGAD+VSAAIA LF +H + Sbjct 3 SLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHARE 62 Query 64 YQELSAHAVAFHEQFVQLMSAGAAQYASAEAANSSPLQIVGQTALDAINSPVQTLTGRPL 123 YQ +S AFH++F Q +SA Y SAEA N++PL + L+A+N+P Q L GRPL Sbjct 63 YQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRPL 122 Query 124 IGNGANGVAGTGQNGGDGGWLYGNGG 149 IG+GA G GTGQ GG GG L+GNGG Sbjct 123 IGDGAAGAPGTGQAGGAGGILWGNGG 148 >gi|148822669|ref|YP_001287423.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] gi|148721196|gb|ABR05821.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] gi|344219280|gb|AEM99910.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2] Length=1407 Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 80/146 (55%), Positives = 100/146 (69%), Gaps = 0/146 (0%) Query 4 SQMIVAPAFVDAAAKDLATIGSAISRANAEALVPITALLPAGADDVSAAIAALFATHGQA 63 S +IVAP V AAA D+A IGS+I ANA A T++L AGAD+VSAAIA LF +H + Sbjct 2 SLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHARE 61 Query 64 YQELSAHAVAFHEQFVQLMSAGAAQYASAEAANSSPLQIVGQTALDAINSPVQTLTGRPL 123 YQ +S AFH++F Q +SA Y SAEA N++PL + L+A+N+P Q L GRPL Sbjct 62 YQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRPL 121 Query 124 IGNGANGVAGTGQNGGDGGWLYGNGG 149 IG+GA G GTGQ GG GG L+GNGG Sbjct 122 IGDGAAGAPGTGQAGGAGGILWGNGG 147 Lambda K H 0.307 0.140 0.432 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1477200037280 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40