BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1806
Length=99
Score E
Sequences producing significant alignments: (Bits) Value
gi|15841276|ref|NP_336313.1| PE family protein [Mycobacterium tu... 187 4e-46
gi|289447420|ref|ZP_06437164.1| PE family protein [Mycobacterium... 155 3e-36
gi|289750379|ref|ZP_06509757.1| PE family protein [Mycobacterium... 139 2e-31
gi|342861310|ref|ZP_08717958.1| hypothetical protein MCOL_20601 ... 90.9 6e-17
gi|333989643|ref|YP_004522257.1| PE-PGRS family protein [Mycobac... 89.7 1e-16
gi|296164186|ref|ZP_06846786.1| PE family protein [Mycobacterium... 88.6 3e-16
gi|254820293|ref|ZP_05225294.1| hypothetical protein MintA_10211... 88.2 3e-16
gi|254775399|ref|ZP_05216915.1| hypothetical protein MaviaA2_121... 88.2 3e-16
gi|240172899|ref|ZP_04751558.1| PE family protein [Mycobacterium... 87.8 5e-16
gi|296170606|ref|ZP_06852185.1| PE family protein [Mycobacterium... 87.4 6e-16
gi|183982677|ref|YP_001850968.1| PE family protein, PE19_1 [Myco... 87.4 6e-16
gi|118618471|ref|YP_906803.1| PE family protein [Mycobacterium u... 87.0 7e-16
gi|333989806|ref|YP_004522420.1| PE family protein PE19 [Mycobac... 87.0 9e-16
gi|342861305|ref|ZP_08717953.1| hypothetical protein MCOL_20576 ... 86.3 1e-15
gi|183984754|ref|YP_001853045.1| PE-PGRS family protein [Mycobac... 84.0 7e-15
gi|15843089|ref|NP_338126.1| PE family protein [Mycobacterium tu... 84.0 8e-15
gi|296164779|ref|ZP_06847341.1| PE family protein [Mycobacterium... 82.8 2e-14
gi|41407605|ref|NP_960441.1| hypothetical protein MAP1507 [Mycob... 82.4 2e-14
gi|31794651|ref|NP_857144.1| PE family protein [Mycobacterium bo... 82.4 2e-14
gi|333989636|ref|YP_004522250.1| PE family protein PE8 [Mycobact... 81.6 4e-14
gi|254774223|ref|ZP_05215739.1| PE family protein [Mycobacterium... 81.3 5e-14
gi|296165761|ref|ZP_06848275.1| PE family protein [Mycobacterium... 80.5 7e-14
gi|41408674|ref|NP_961510.1| hypothetical protein MAP2576c [Myco... 80.5 9e-14
gi|333990542|ref|YP_004523156.1| PE-PGRS family protein [Mycobac... 79.0 2e-13
gi|342862086|ref|ZP_08718729.1| PE family protein [Mycobacterium... 79.0 2e-13
gi|240172414|ref|ZP_04751073.1| PE family protein, PE19_1 [Mycob... 78.6 3e-13
gi|296166686|ref|ZP_06849111.1| PE family protein [Mycobacterium... 78.6 3e-13
gi|254822878|ref|ZP_05227879.1| PE family protein [Mycobacterium... 77.4 6e-13
gi|118619579|ref|YP_907911.1| PE family protein [Mycobacterium u... 77.0 9e-13
gi|212596283|gb|ACJ35566.1| PE5 [Mycobacterium intracellulare AT... 77.0 9e-13
gi|15841256|ref|NP_336293.1| PE family protein [Mycobacterium tu... 75.9 2e-12
gi|240172420|ref|ZP_04751079.1| PE family protein, PE19_1 [Mycob... 75.9 2e-12
gi|342861297|ref|ZP_08717945.1| hypothetical protein MCOL_20536 ... 75.9 2e-12
gi|254364620|ref|ZP_04980666.1| PE family protein [Mycobacterium... 75.1 3e-12
gi|183982680|ref|YP_001850971.1| PE family protein, PE19 [Mycoba... 75.1 3e-12
gi|118619702|ref|YP_908034.1| PE family protein [Mycobacterium u... 74.7 4e-12
gi|183984422|ref|YP_001852713.1| PE family protein, PE8 [Mycobac... 74.7 4e-12
gi|118618467|ref|YP_906799.1| PE family protein [Mycobacterium u... 73.9 8e-12
gi|254365420|ref|ZP_04981465.1| PE family protein [Mycobacterium... 73.6 9e-12
gi|333992874|ref|YP_004525488.1| PE-PGRS family protein [Mycobac... 73.6 1e-11
gi|240173303|ref|ZP_04751961.1| PE family protein [Mycobacterium... 73.2 1e-11
gi|118619370|ref|YP_907702.1| PE family protein [Mycobacterium u... 72.8 1e-11
gi|183985086|ref|YP_001853377.1| PE family protein, PE32 [Mycoba... 72.8 2e-11
gi|183980964|ref|YP_001849255.1| PE-PGRS family protein [Mycobac... 72.8 2e-11
gi|240173524|ref|ZP_04752182.1| PE family protein, PE19_1 [Mycob... 72.4 2e-11
gi|240170799|ref|ZP_04749458.1| PE-PGRS family protein [Mycobact... 72.4 2e-11
gi|240169038|ref|ZP_04747697.1| hypothetical protein MkanA1_0697... 72.0 3e-11
gi|296165770|ref|ZP_06848283.1| PE family protein [Mycobacterium... 68.9 2e-10
gi|118619178|ref|YP_907510.1| PE-PGRS family protein [Mycobacter... 68.6 3e-10
gi|31792979|ref|NP_855472.1| PE family protein [Mycobacterium bo... 67.8 5e-10
>gi|15841276|ref|NP_336313.1| PE family protein [Mycobacterium tuberculosis CDC1551]
gi|31792995|ref|NP_855488.1| PE family protein [Mycobacterium bovis AF2122/97]
gi|57116919|ref|YP_177843.1| PE family protein [Mycobacterium tuberculosis H37Rv]
73 more sequence titles
Length=99
Score = 187 bits (476), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 99/99 (100%), Positives = 99/99 (100%), Gaps = 0/99 (0%)
Query 1 MAFVLVCPDALAIAAGQLRHVGSVIAARNAVAAPATAELAPAAADEVSALTATQFNFHAA 60
MAFVLVCPDALAIAAGQLRHVGSVIAARNAVAAPATAELAPAAADEVSALTATQFNFHAA
Sbjct 1 MAFVLVCPDALAIAAGQLRHVGSVIAARNAVAAPATAELAPAAADEVSALTATQFNFHAA 60
Query 61 MYQAVGAQAIAMNEAFVAMLGASADSYAATEAANIIAVS 99
MYQAVGAQAIAMNEAFVAMLGASADSYAATEAANIIAVS
Sbjct 61 MYQAVGAQAIAMNEAFVAMLGASADSYAATEAANIIAVS 99
>gi|289447420|ref|ZP_06437164.1| PE family protein [Mycobacterium tuberculosis CPHL_A]
gi|289420378|gb|EFD17579.1| PE family protein [Mycobacterium tuberculosis CPHL_A]
Length=97
Score = 155 bits (391), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 80/80 (100%), Positives = 80/80 (100%), Gaps = 0/80 (0%)
Query 1 MAFVLVCPDALAIAAGQLRHVGSVIAARNAVAAPATAELAPAAADEVSALTATQFNFHAA 60
MAFVLVCPDALAIAAGQLRHVGSVIAARNAVAAPATAELAPAAADEVSALTATQFNFHAA
Sbjct 1 MAFVLVCPDALAIAAGQLRHVGSVIAARNAVAAPATAELAPAAADEVSALTATQFNFHAA 60
Query 61 MYQAVGAQAIAMNEAFVAML 80
MYQAVGAQAIAMNEAFVAML
Sbjct 61 MYQAVGAQAIAMNEAFVAML 80
>gi|289750379|ref|ZP_06509757.1| PE family protein [Mycobacterium tuberculosis T92]
gi|289690966|gb|EFD58395.1| PE family protein [Mycobacterium tuberculosis T92]
Length=76
Score = 139 bits (349), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/76 (99%), Positives = 76/76 (100%), Gaps = 0/76 (0%)
Query 24 VIAARNAVAAPATAELAPAAADEVSALTATQFNFHAAMYQAVGAQAIAMNEAFVAMLGAS 83
+IAARNAVAAPATAELAPAAADEVSALTATQFNFHAAMYQAVGAQAIAMNEAFVAMLGAS
Sbjct 1 MIAARNAVAAPATAELAPAAADEVSALTATQFNFHAAMYQAVGAQAIAMNEAFVAMLGAS 60
Query 84 ADSYAATEAANIIAVS 99
ADSYAATEAANIIAVS
Sbjct 61 ADSYAATEAANIIAVS 76
>gi|342861310|ref|ZP_08717958.1| hypothetical protein MCOL_20601 [Mycobacterium colombiense CECT
3035]
gi|342131210|gb|EGT84491.1| hypothetical protein MCOL_20601 [Mycobacterium colombiense CECT
3035]
Length=99
Score = 90.9 bits (224), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/91 (59%), Positives = 64/91 (71%), Gaps = 0/91 (0%)
Query 1 MAFVLVCPDALAIAAGQLRHVGSVIAARNAVAAPATAELAPAAADEVSALTATQFNFHAA 60
M+FV P+ALA AAG L+ +GS ++A+NA AA T + PAAADEVSALTA QF H
Sbjct 1 MSFVTTQPEALAAAAGNLQTIGSTLSAQNAAAAAPTTGVVPAAADEVSALTAAQFAAHGQ 60
Query 61 MYQAVGAQAIAMNEAFVAMLGASADSYAATE 91
MYQAV AQA A++E FV L S+ SYA TE
Sbjct 61 MYQAVSAQAAAIHEMFVNTLSTSSGSYAVTE 91
>gi|333989643|ref|YP_004522257.1| PE-PGRS family protein [Mycobacterium sp. JDM601]
gi|333485611|gb|AEF35003.1| PE-PGRS family protein [Mycobacterium sp. JDM601]
Length=99
Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/87 (58%), Positives = 63/87 (73%), Gaps = 0/87 (0%)
Query 1 MAFVLVCPDALAIAAGQLRHVGSVIAARNAVAAPATAELAPAAADEVSALTATQFNFHAA 60
M+FV P+ALA AAG L+ +GS + A+NA A+ T + PAAADEVSALTA QF HA
Sbjct 1 MSFVTTQPEALAAAAGNLQAIGSALNAQNAAASAPTTGVVPAAADEVSALTAAQFATHAT 60
Query 61 MYQAVGAQAIAMNEAFVAMLGASADSY 87
+YQ+V AQA A++E FVA L SA+SY
Sbjct 61 LYQSVAAQAAAIHEMFVATLNGSAESY 87
>gi|296164186|ref|ZP_06846786.1| PE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295900461|gb|EFG79867.1| PE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=99
Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/88 (61%), Positives = 60/88 (69%), Gaps = 0/88 (0%)
Query 4 VLVCPDALAIAAGQLRHVGSVIAARNAVAAPATAELAPAAADEVSALTATQFNFHAAMYQ 63
V V P L AAG L+ +GS ++A NA AA T + PAAADEVSALTA QF HA MYQ
Sbjct 4 VTVDPQMLTAAAGTLQGIGSAMSAENAPAAAPTTGVVPAAADEVSALTALQFAAHAQMYQ 63
Query 64 AVGAQAIAMNEAFVAMLGASADSYAATE 91
AV AQA A++E F LG SADSYA TE
Sbjct 64 AVSAQAAAIHEMFANTLGVSADSYAVTE 91
>gi|254820293|ref|ZP_05225294.1| hypothetical protein MintA_10211 [Mycobacterium intracellulare
ATCC 13950]
gi|212596298|gb|ACJ35567.1| PE7 [Mycobacterium intracellulare ATCC 13950]
Length=99
Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/87 (60%), Positives = 63/87 (73%), Gaps = 0/87 (0%)
Query 1 MAFVLVCPDALAIAAGQLRHVGSVIAARNAVAAPATAELAPAAADEVSALTATQFNFHAA 60
M+FV P+ALA AAG L+ +GS ++A+NA AA T + PAAADEVSALTA QF HA
Sbjct 1 MSFVTTQPEALAAAAGNLQAIGSTLSAQNAAAAAPTTGVVPAAADEVSALTAAQFAAHAQ 60
Query 61 MYQAVGAQAIAMNEAFVAMLGASADSY 87
MYQAV AQA A++EAFV L S+ SY
Sbjct 61 MYQAVSAQAQAIHEAFVNTLSTSSGSY 87
>gi|254775399|ref|ZP_05216915.1| hypothetical protein MaviaA2_12121 [Mycobacterium avium subsp.
avium ATCC 25291]
gi|212595819|gb|ACJ35525.1| PE7 [Mycobacterium avium subsp. avium]
gi|336457654|gb|EGO36658.1| PE family protein [Mycobacterium avium subsp. paratuberculosis
S397]
Length=99
Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/87 (60%), Positives = 63/87 (73%), Gaps = 0/87 (0%)
Query 1 MAFVLVCPDALAIAAGQLRHVGSVIAARNAVAAPATAELAPAAADEVSALTATQFNFHAA 60
M+FV P+ALA AAG L+ +GS ++A+NA AA T + PAAADEVSALTA QF HA
Sbjct 1 MSFVTTQPEALAAAAGNLQAIGSTLSAQNAAAAAPTTGVVPAAADEVSALTAAQFAAHAQ 60
Query 61 MYQAVGAQAIAMNEAFVAMLGASADSY 87
MYQAV AQA A++EAFV L S+ SY
Sbjct 61 MYQAVSAQAAAIHEAFVNTLSTSSGSY 87
>gi|240172899|ref|ZP_04751558.1| PE family protein [Mycobacterium kansasii ATCC 12478]
Length=99
Score = 87.8 bits (216), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/87 (55%), Positives = 64/87 (74%), Gaps = 0/87 (0%)
Query 1 MAFVLVCPDALAIAAGQLRHVGSVIAARNAVAAPATAELAPAAADEVSALTATQFNFHAA 60
M FV+ P+ LA AAG L+ +GS ++A+N A+ T + PAAAD+VSALTA +F+ HA
Sbjct 1 MTFVVTQPETLAAAAGNLQEIGSAVSAQNVAASAHTTSVTPAAADQVSALTAARFSAHAQ 60
Query 61 MYQAVGAQAIAMNEAFVAMLGASADSY 87
+YQ V AQA A+++AFVA L ASA+SY
Sbjct 61 VYQVVSAQAAAIHQAFVAALTASANSY 87
>gi|296170606|ref|ZP_06852185.1| PE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295894738|gb|EFG74468.1| PE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=99
Score = 87.4 bits (215), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/87 (60%), Positives = 63/87 (73%), Gaps = 0/87 (0%)
Query 1 MAFVLVCPDALAIAAGQLRHVGSVIAARNAVAAPATAELAPAAADEVSALTATQFNFHAA 60
M+FV P+ALA AAG L+ +GS ++A+NA AA T + PAAADEVSALTA QF HA
Sbjct 1 MSFVTTQPEALAAAAGNLQAIGSTLSAQNAAAAAPTTGVVPAAADEVSALTAAQFAAHAQ 60
Query 61 MYQAVGAQAIAMNEAFVAMLGASADSY 87
MYQAV AQA A++EAFV L S+ SY
Sbjct 61 MYQAVSAQAAAIHEAFVNTLSMSSGSY 87
>gi|183982677|ref|YP_001850968.1| PE family protein, PE19_1 [Mycobacterium marinum M]
gi|183176003|gb|ACC41113.1| PE family protein, PE19_1 [Mycobacterium marinum M]
Length=99
Score = 87.4 bits (215), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/87 (57%), Positives = 62/87 (72%), Gaps = 0/87 (0%)
Query 1 MAFVLVCPDALAIAAGQLRHVGSVIAARNAVAAPATAELAPAAADEVSALTATQFNFHAA 60
M++V P+ALA AA L+ +GS ++++NA AA T + PAAADEVSALTA QF HA
Sbjct 1 MSYVTTQPEALAAAASTLQGIGSTLSSQNAAAAAPTTGVVPAAADEVSALTAAQFAAHAQ 60
Query 61 MYQAVGAQAIAMNEAFVAMLGASADSY 87
MYQAV AQA A++E FV LG S+ SY
Sbjct 61 MYQAVSAQASAIHEMFVNTLGISSGSY 87
>gi|118618471|ref|YP_906803.1| PE family protein [Mycobacterium ulcerans Agy99]
gi|118570581|gb|ABL05332.1| PE family protein [Mycobacterium ulcerans Agy99]
Length=99
Score = 87.0 bits (214), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/87 (57%), Positives = 62/87 (72%), Gaps = 0/87 (0%)
Query 1 MAFVLVCPDALAIAAGQLRHVGSVIAARNAVAAPATAELAPAAADEVSALTATQFNFHAA 60
M++V P+ALA AA L+ +GS ++++NA AA T + PAAADEVSALTA QF HA
Sbjct 1 MSYVTTQPEALAAAASTLQGIGSTLSSQNAAAAAPTTGVVPAAADEVSALTAAQFVAHAQ 60
Query 61 MYQAVGAQAIAMNEAFVAMLGASADSY 87
MYQAV AQA A++E FV LG S+ SY
Sbjct 61 MYQAVSAQASAIHEMFVNTLGISSGSY 87
>gi|333989806|ref|YP_004522420.1| PE family protein PE19 [Mycobacterium sp. JDM601]
gi|333485774|gb|AEF35166.1| PE family protein PE19 [Mycobacterium sp. JDM601]
Length=99
Score = 87.0 bits (214), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 51/87 (59%), Positives = 62/87 (72%), Gaps = 0/87 (0%)
Query 1 MAFVLVCPDALAIAAGQLRHVGSVIAARNAVAAPATAELAPAAADEVSALTATQFNFHAA 60
M+FV P+ALA AA +LR +GSV+AA+N AA T L PAAADEVSALTA F+ HA
Sbjct 1 MSFVNTQPEALASAASELRGIGSVVAAQNMAAAGPTTVLPPAAADEVSALTAALFSAHAQ 60
Query 61 MYQAVGAQAIAMNEAFVAMLGASADSY 87
YQ V AQA A++EAFV L S++SY
Sbjct 61 AYQEVSAQAAAIHEAFVRTLALSSESY 87
>gi|342861305|ref|ZP_08717953.1| hypothetical protein MCOL_20576 [Mycobacterium colombiense CECT
3035]
gi|342131205|gb|EGT84486.1| hypothetical protein MCOL_20576 [Mycobacterium colombiense CECT
3035]
Length=99
Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/87 (59%), Positives = 62/87 (72%), Gaps = 0/87 (0%)
Query 1 MAFVLVCPDALAIAAGQLRHVGSVIAARNAVAAPATAELAPAAADEVSALTATQFNFHAA 60
M+FV P+ALA AAG L+ +GS ++A+NA AA T + PAAADEVSALTA QF HA
Sbjct 1 MSFVTTQPEALAAAAGNLQAIGSTLSAQNAAAAAPTTGVVPAAADEVSALTAAQFAAHAQ 60
Query 61 MYQAVGAQAIAMNEAFVAMLGASADSY 87
MYQAV AQA A++E FV L S+ SY
Sbjct 61 MYQAVSAQAAAIHEMFVNTLSTSSGSY 87
>gi|183984754|ref|YP_001853045.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183178080|gb|ACC43190.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=99
Score = 84.0 bits (206), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/98 (59%), Positives = 65/98 (67%), Gaps = 2/98 (2%)
Query 1 MAFVLVCPDALAIAAGQLRHVGSVIAARNAVA-APATAELAPAAADEVSALTATQFNFHA 59
MAFV P+AL AA L VG+ ++A NA A AP T + PAAADEVSALTA F H
Sbjct 1 MAFVTSAPEALTAAALNLHSVGAGMSAGNAAAMAPITG-VVPAAADEVSALTAAHFAAHG 59
Query 60 AMYQAVGAQAIAMNEAFVAMLGASADSYAATEAANIIA 97
AMYQ + AQA A++E FV L AS SYA TEAAN IA
Sbjct 60 AMYQTLSAQAQAIHEMFVTTLQASGGSYAETEAANAIA 97
>gi|15843089|ref|NP_338126.1| PE family protein [Mycobacterium tuberculosis CDC1551]
gi|57117110|ref|YP_177975.1| PE family protein [Mycobacterium tuberculosis H37Rv]
gi|121639395|ref|YP_979619.1| PE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
75 more sequence titles
Length=98
Score = 84.0 bits (206), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/89 (54%), Positives = 58/89 (66%), Gaps = 0/89 (0%)
Query 8 PDALAIAAGQLRHVGSVIAARNAVAAPATAELAPAAADEVSALTATQFNFHAAMYQAVGA 67
P+ LA AAG+LR +G+ + A NA AA T + P AADEVS L ATQF HAA YQ A
Sbjct 7 PEMLAAAAGELRSLGATLKASNAAAAVPTTGVVPPAADEVSLLLATQFRTHAATYQTASA 66
Query 68 QAIAMNEAFVAMLGASADSYAATEAANII 96
+A ++E FV L SA SYA TEAAN +
Sbjct 67 KAAVIHEQFVTTLATSASSYADTEAANAV 95
>gi|296164779|ref|ZP_06847341.1| PE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295899880|gb|EFG79324.1| PE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=99
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/91 (59%), Positives = 64/91 (71%), Gaps = 0/91 (0%)
Query 1 MAFVLVCPDALAIAAGQLRHVGSVIAARNAVAAPATAELAPAAADEVSALTATQFNFHAA 60
M+FV P+AL+ AAG L+ +GS + A+NA AA T + PAAADEVSALTA QF HA
Sbjct 1 MSFVTTQPEALSAAAGSLQSIGSALNAQNAAAAAPTTGVVPAAADEVSALTAAQFAAHAQ 60
Query 61 MYQAVGAQAIAMNEAFVAMLGASADSYAATE 91
MYQAV AQA A++E FV L S+ SYA TE
Sbjct 61 MYQAVSAQAAAIHEMFVNTLSMSSGSYAVTE 91
>gi|41407605|ref|NP_960441.1| hypothetical protein MAP1507 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41395958|gb|AAS03824.1| PE_4 [Mycobacterium avium subsp. paratuberculosis K-10]
gi|225698451|gb|ACO07343.1| PE protein [Mycobacterium avium subsp. paratuberculosis]
Length=99
Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/87 (58%), Positives = 62/87 (72%), Gaps = 0/87 (0%)
Query 1 MAFVLVCPDALAIAAGQLRHVGSVIAARNAVAAPATAELAPAAADEVSALTATQFNFHAA 60
M+FV P+ALA AAG L+ +G ++A+NA AA T + PAAADEVSALTA QF +A
Sbjct 1 MSFVTTQPEALAAAAGNLQAIGWTLSAQNAAAAAPTTGVVPAAADEVSALTAAQFAAYAQ 60
Query 61 MYQAVGAQAIAMNEAFVAMLGASADSY 87
MYQAV AQA A++EAFV L S+ SY
Sbjct 61 MYQAVSAQAAAIHEAFVNTLSTSSVSY 87
>gi|31794651|ref|NP_857144.1| PE family protein [Mycobacterium bovis AF2122/97]
gi|31620248|emb|CAD95691.1| PE FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
Length=98
Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/89 (53%), Positives = 57/89 (65%), Gaps = 0/89 (0%)
Query 8 PDALAIAAGQLRHVGSVIAARNAVAAPATAELAPAAADEVSALTATQFNFHAAMYQAVGA 67
P+ LA AAG+LR +G+ + NA AA T + P AADEVS L ATQF HAA YQ A
Sbjct 7 PEMLAAAAGELRSLGATLKVSNAAAAVPTTGVVPPAADEVSLLLATQFRTHAATYQTASA 66
Query 68 QAIAMNEAFVAMLGASADSYAATEAANII 96
+A ++E FV L SA SYA TEAAN +
Sbjct 67 KAAVIHEQFVTTLATSASSYADTEAANAV 95
>gi|333989636|ref|YP_004522250.1| PE family protein PE8 [Mycobacterium sp. JDM601]
gi|333485604|gb|AEF34996.1| PE family protein PE8 [Mycobacterium sp. JDM601]
Length=273
Score = 81.6 bits (200), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/91 (50%), Positives = 58/91 (64%), Gaps = 0/91 (0%)
Query 1 MAFVLVCPDALAIAAGQLRHVGSVIAARNAVAAPATAELAPAAADEVSALTATQFNFHAA 60
M+FV P+A+A A L+ +GS + A+N AA T +APA ADEVS L ATQF +
Sbjct 1 MSFVTTHPEAMAATASNLQAIGSAMTAQNTAAAAPTTGIAPAGADEVSVLQATQFAAYGQ 60
Query 61 MYQAVGAQAIAMNEAFVAMLGASADSYAATE 91
+YQ + AQA A+ E FV L SADSY +TE
Sbjct 61 LYQQISAQAAAIQEMFVNTLRTSADSYGSTE 91
>gi|254774223|ref|ZP_05215739.1| PE family protein [Mycobacterium avium subsp. avium ATCC 25291]
Length=173
Score = 81.3 bits (199), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/99 (51%), Positives = 63/99 (64%), Gaps = 0/99 (0%)
Query 1 MAFVLVCPDALAIAAGQLRHVGSVIAARNAVAAPATAELAPAAADEVSALTATQFNFHAA 60
M+FV P+AL A L +GS + A+NA AA T +APAAADEVSAL A QF+ +
Sbjct 1 MSFVTTRPEALLAVASMLEGLGSSMDAQNAAAAAPTTSIAPAAADEVSALQAAQFSAYGT 60
Query 61 MYQAVGAQAIAMNEAFVAMLGASADSYAATEAANIIAVS 99
YQ V AQA A+++ V L +ADSY ATEAAN + S
Sbjct 61 WYQQVSAQAKAIHQTLVQNLDTNADSYGATEAANRVNTS 99
>gi|296165761|ref|ZP_06848275.1| PE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295898886|gb|EFG78378.1| PE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=99
Score = 80.5 bits (197), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/99 (57%), Positives = 65/99 (66%), Gaps = 0/99 (0%)
Query 1 MAFVLVCPDALAIAAGQLRHVGSVIAARNAVAAPATAELAPAAADEVSALTATQFNFHAA 60
M+FV P+ LA A LR +GS +A +NA A+ +T + PA ADEVSALTA QF HA
Sbjct 1 MSFVTAQPEMLAATANDLRGIGSALAVQNAAASRSTTGVIPAGADEVSALTAVQFAAHAQ 60
Query 61 MYQAVGAQAIAMNEAFVAMLGASADSYAATEAANIIAVS 99
MYQAV AQA A + FV L SA SYAATEA N IA S
Sbjct 61 MYQAVSAQAAAAYDLFVRTLAVSAGSYAATEAINTIAAS 99
>gi|41408674|ref|NP_961510.1| hypothetical protein MAP2576c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118463687|ref|YP_880590.1| PE family protein [Mycobacterium avium 104]
gi|41397032|gb|AAS04893.1| PE_6 [Mycobacterium avium subsp. paratuberculosis K-10]
gi|118164974|gb|ABK65871.1| PE family protein [Mycobacterium avium 104]
gi|212595794|gb|ACJ35523.1| PE5 [Mycobacterium avium subsp. avium]
Length=278
Score = 80.5 bits (197), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/99 (51%), Positives = 63/99 (64%), Gaps = 0/99 (0%)
Query 1 MAFVLVCPDALAIAAGQLRHVGSVIAARNAVAAPATAELAPAAADEVSALTATQFNFHAA 60
M+FV P+AL A L +GS + A+NA AA T +APAAADEVSAL A QF+ +
Sbjct 1 MSFVTTRPEALLAVASMLEGLGSSMDAQNAAAAAPTTSIAPAAADEVSALQAAQFSAYGT 60
Query 61 MYQAVGAQAIAMNEAFVAMLGASADSYAATEAANIIAVS 99
YQ V AQA A+++ V L +ADSY ATEAAN + S
Sbjct 61 WYQQVSAQAKAIHQTLVQNLDTNADSYGATEAANRVNTS 99
>gi|333990542|ref|YP_004523156.1| PE-PGRS family protein [Mycobacterium sp. JDM601]
gi|333486510|gb|AEF35902.1| PE-PGRS family protein [Mycobacterium sp. JDM601]
Length=99
Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/87 (58%), Positives = 65/87 (75%), Gaps = 0/87 (0%)
Query 1 MAFVLVCPDALAIAAGQLRHVGSVIAARNAVAAPATAELAPAAADEVSALTATQFNFHAA 60
M+FV P+AL AAG L +GS ++A+NA AA T + PAAADEVSALTA QF HA+
Sbjct 1 MSFVNTQPEALTAAAGNLAAIGSALSAQNAAAATPTTGVVPAAADEVSALTAAQFAAHAS 60
Query 61 MYQAVGAQAIAMNEAFVAMLGASADSY 87
MYQ++ AQA A+++AFVA L +SA+SY
Sbjct 61 MYQSISAQAEAIHQAFVATLNSSANSY 87
>gi|342862086|ref|ZP_08718729.1| PE family protein [Mycobacterium colombiense CECT 3035]
gi|342130390|gb|EGT83705.1| PE family protein [Mycobacterium colombiense CECT 3035]
Length=268
Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/99 (50%), Positives = 64/99 (65%), Gaps = 0/99 (0%)
Query 1 MAFVLVCPDALAIAAGQLRHVGSVIAARNAVAAPATAELAPAAADEVSALTATQFNFHAA 60
M+FV P+AL A L+ +GS + A+NA AA T +APAAADEVSAL A QF+ + A
Sbjct 1 MSFVTTRPEALLATASMLQALGSSMDAQNAAAAAPTTSIAPAAADEVSALQAAQFSAYGA 60
Query 61 MYQAVGAQAIAMNEAFVAMLGASADSYAATEAANIIAVS 99
YQ V AQA A+++ VA L ++A SY TE AN + S
Sbjct 61 WYQQVSAQAKAVHQTMVANLNSNAGSYGETETANKVTTS 99
>gi|240172414|ref|ZP_04751073.1| PE family protein, PE19_1 [Mycobacterium kansasii ATCC 12478]
Length=281
Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/94 (49%), Positives = 62/94 (66%), Gaps = 0/94 (0%)
Query 1 MAFVLVCPDALAIAAGQLRHVGSVIAARNAVAAPATAELAPAAADEVSALTATQFNFHAA 60
M+FV+ P+ L A G+L +GS ++ N AA A + PAAADEVS +TA F +
Sbjct 1 MSFVITLPEMLMAAVGRLEAIGSAVSTANVTAALPIAGVIPAAADEVSMVTAASFTAYGQ 60
Query 61 MYQAVGAQAIAMNEAFVAMLGASADSYAATEAAN 94
+YQA+ A+A ++E FV LG SA+SYAATEAAN
Sbjct 61 LYQAISAEAHLIHEQFVKALGLSANSYAATEAAN 94
>gi|296166686|ref|ZP_06849111.1| PE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295897951|gb|EFG77532.1| PE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=99
Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/98 (53%), Positives = 65/98 (67%), Gaps = 0/98 (0%)
Query 1 MAFVLVCPDALAIAAGQLRHVGSVIAARNAVAAPATAELAPAAADEVSALTATQFNFHAA 60
M+ V+ PD L+ AAG+L+ + S + A NA AA T +APAA+D VS LTATQF+ HA
Sbjct 1 MSIVIAQPDMLSAAAGELQSINSALQAGNAAAAGPTTAVAPAASDAVSILTATQFSAHAQ 60
Query 61 MYQAVGAQAIAMNEAFVAMLGASADSYAATEAANIIAV 98
+YQA+ AQA E +LG A SYAATEAAN + V
Sbjct 61 LYQAISAQAARAQEQLATVLGICAGSYAATEAANSVLV 98
>gi|254822878|ref|ZP_05227879.1| PE family protein [Mycobacterium intracellulare ATCC 13950]
Length=176
Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/98 (50%), Positives = 61/98 (63%), Gaps = 0/98 (0%)
Query 1 MAFVLVCPDALAIAAGQLRHVGSVIAARNAVAAPATAELAPAAADEVSALTATQFNFHAA 60
M+FV P+AL AA L +GS + A+NA AA T +APAAADEVSAL A QF+ + A
Sbjct 1 MSFVTTRPEALMAAASMLEALGSSMDAQNAAAAAPTTSIAPAAADEVSALQAAQFSAYGA 60
Query 61 MYQAVGAQAIAMNEAFVAMLGASADSYAATEAANIIAV 98
YQ V AQA A+++ V L SA SY TE AN +
Sbjct 61 WYQQVSAQAKAIHQTMVNNLDTSAGSYGETETANRVTT 98
>gi|118619579|ref|YP_907911.1| PE family protein [Mycobacterium ulcerans Agy99]
gi|183984578|ref|YP_001852869.1| PE family protein [Mycobacterium marinum M]
gi|118571689|gb|ABL06440.1| PE family protein [Mycobacterium ulcerans Agy99]
gi|183177904|gb|ACC43014.1| PE family protein [Mycobacterium marinum M]
Length=99
Score = 77.0 bits (188), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/87 (55%), Positives = 64/87 (74%), Gaps = 0/87 (0%)
Query 1 MAFVLVCPDALAIAAGQLRHVGSVIAARNAVAAPATAELAPAAADEVSALTATQFNFHAA 60
M+FV+ P+ LA AAG L+ VGS ++A++A A T +APAAAD+VSALTA +F+ HA
Sbjct 1 MSFVVTQPERLAAAAGSLQEVGSAVSAQSAAAVAPTTSVAPAAADQVSALTAARFSAHAQ 60
Query 61 MYQAVGAQAIAMNEAFVAMLGASADSY 87
+YQ V AQA+A+++ FVA L A A SY
Sbjct 61 LYQMVSAQAVAIHDRFVAALAAGAQSY 87
>gi|212596283|gb|ACJ35566.1| PE5 [Mycobacterium intracellulare ATCC 13950]
Length=265
Score = 77.0 bits (188), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/96 (52%), Positives = 61/96 (64%), Gaps = 0/96 (0%)
Query 1 MAFVLVCPDALAIAAGQLRHVGSVIAARNAVAAPATAELAPAAADEVSALTATQFNFHAA 60
M+FV P+AL AA L +GS + A+NA AA T +APAAADEVSAL A QF+ + A
Sbjct 1 MSFVTTRPEALMAAASMLEALGSSMDAQNAAAAAPTTSIAPAAADEVSALQAAQFSAYGA 60
Query 61 MYQAVGAQAIAMNEAFVAMLGASADSYAATEAANII 96
YQ V AQA A+++ V L SA SY TE AN +
Sbjct 61 WYQQVSAQAKAIHQTMVNNLDTSAGSYGETETANRV 96
>gi|15841256|ref|NP_336293.1| PE family protein [Mycobacterium tuberculosis CDC1551]
gi|31792976|ref|NP_855469.1| PE family protein [Mycobacterium bovis AF2122/97]
gi|57116910|ref|YP_177834.1| PE family protein [Mycobacterium tuberculosis H37Rv]
60 more sequence titles
Length=99
Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/87 (58%), Positives = 61/87 (71%), Gaps = 0/87 (0%)
Query 1 MAFVLVCPDALAIAAGQLRHVGSVIAARNAVAAPATAELAPAAADEVSALTATQFNFHAA 60
M+FV P+ALA AAG L+ +GS + A+NA AA T + PAAADEVSALTA QF HA
Sbjct 1 MSFVTTQPEALAAAAGSLQGIGSALNAQNAAAATPTTGVVPAAADEVSALTAAQFAAHAQ 60
Query 61 MYQAVGAQAIAMNEAFVAMLGASADSY 87
+YQAV AQA A++E FV L S+ SY
Sbjct 61 IYQAVSAQAAAIHEMFVNTLQMSSGSY 87
>gi|240172420|ref|ZP_04751079.1| PE family protein, PE19_1 [Mycobacterium kansasii ATCC 12478]
Length=99
Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/98 (48%), Positives = 62/98 (64%), Gaps = 0/98 (0%)
Query 1 MAFVLVCPDALAIAAGQLRHVGSVIAARNAVAAPATAELAPAAADEVSALTATQFNFHAA 60
M+ + P+ L AA +L+ +GS + +RNA AA AT + P A DEVSALTA F HA
Sbjct 1 MSILTTEPEMLQSAATKLQTLGSSMISRNAAAAAATMNVIPPAGDEVSALTAMHFAAHAK 60
Query 61 MYQAVGAQAIAMNEAFVAMLGASADSYAATEAANIIAV 98
+QAV +AIA++EAFVA L A DSY EA N + +
Sbjct 61 AFQAVYTRAIAIHEAFVATLAACGDSYTVVEATNRVGL 98
>gi|342861297|ref|ZP_08717945.1| hypothetical protein MCOL_20536 [Mycobacterium colombiense CECT
3035]
gi|342131197|gb|EGT84478.1| hypothetical protein MCOL_20536 [Mycobacterium colombiense CECT
3035]
Length=99
Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/88 (54%), Positives = 58/88 (66%), Gaps = 2/88 (2%)
Query 1 MAFVLVCPDALAIAAGQLRHVGSVIAARN-AVAAPATAELAPAAADEVSALTATQFNFHA 59
M FV P++L IAA +L +GS + A+N A AAP T +APAAADEVS LTA QF H
Sbjct 1 MNFVTAQPESLDIAASRLHEIGSALTAQNSATAAPMTG-VAPAAADEVSLLTAAQFARHG 59
Query 60 AMYQAVGAQAIAMNEAFVAMLGASADSY 87
+QA+ AQA A++E FV L SA SY
Sbjct 60 QTFQALSAQAAAIHENFVTTLQVSAGSY 87
>gi|254364620|ref|ZP_04980666.1| PE family protein [Mycobacterium tuberculosis str. Haarlem]
gi|134150134|gb|EBA42179.1| PE family protein [Mycobacterium tuberculosis str. Haarlem]
Length=99
Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/87 (58%), Positives = 60/87 (69%), Gaps = 0/87 (0%)
Query 1 MAFVLVCPDALAIAAGQLRHVGSVIAARNAVAAPATAELAPAAADEVSALTATQFNFHAA 60
M FV P+ALA AAG L+ +GS + A+NA AA T + PAAADEVSALTA QF HA
Sbjct 1 MPFVTTQPEALAAAAGSLQGIGSALNAQNAAAATPTTGVVPAAADEVSALTAAQFAAHAQ 60
Query 61 MYQAVGAQAIAMNEAFVAMLGASADSY 87
+YQAV AQA A++E FV L S+ SY
Sbjct 61 IYQAVSAQAAAIHEMFVNTLQMSSGSY 87
>gi|183982680|ref|YP_001850971.1| PE family protein, PE19 [Mycobacterium marinum M]
gi|183176006|gb|ACC41116.1| PE family protein, PE19 [Mycobacterium marinum M]
Length=99
Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/87 (57%), Positives = 61/87 (71%), Gaps = 0/87 (0%)
Query 1 MAFVLVCPDALAIAAGQLRHVGSVIAARNAVAAPATAELAPAAADEVSALTATQFNFHAA 60
M+FV P+ALA AA L+ +G+ ++A+NA AA T + PAAADEVSALTA QF HA
Sbjct 1 MSFVTTQPEALAAAAANLQGIGTTMSAQNAAAAAPTTGVVPAAADEVSALTAAQFAAHAQ 60
Query 61 MYQAVGAQAIAMNEAFVAMLGASADSY 87
MYQAV AQA A++E FV L S+ SY
Sbjct 61 MYQAVSAQAAAIHEMFVNTLATSSGSY 87
>gi|118619702|ref|YP_908034.1| PE family protein [Mycobacterium ulcerans Agy99]
gi|118571812|gb|ABL06563.1| PE family protein [Mycobacterium ulcerans Agy99]
Length=274
Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/94 (50%), Positives = 59/94 (63%), Gaps = 0/94 (0%)
Query 1 MAFVLVCPDALAIAAGQLRHVGSVIAARNAVAAPATAELAPAAADEVSALTATQFNFHAA 60
M+F+ P+ L AA QL +GS ++A+NA AA T +APAA DEVSAL A F +
Sbjct 1 MSFLKTVPEELTAAAAQLGTIGSSMSAQNAAAAAPTTVIAPAALDEVSALQAALFTAYGT 60
Query 61 MYQAVGAQAIAMNEAFVAMLGASADSYAATEAAN 94
YQ V A A AM++ FV LGASA +Y ATE N
Sbjct 61 YYQQVSADAQAMHDMFVNTLGASAGTYGATENLN 94
>gi|183984422|ref|YP_001852713.1| PE family protein, PE8 [Mycobacterium marinum M]
gi|183177748|gb|ACC42858.1| PE family protein, PE8 [Mycobacterium marinum M]
Length=274
Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/94 (50%), Positives = 59/94 (63%), Gaps = 0/94 (0%)
Query 1 MAFVLVCPDALAIAAGQLRHVGSVIAARNAVAAPATAELAPAAADEVSALTATQFNFHAA 60
M+F+ P+ L AA QL +GS ++A+NA AA T +APAA DEVSAL A F +
Sbjct 1 MSFLKTVPEELTAAAAQLGTIGSSMSAQNAAAAAPTTVIAPAALDEVSALQAALFTAYGT 60
Query 61 MYQAVGAQAIAMNEAFVAMLGASADSYAATEAAN 94
YQ V A A AM++ FV LGASA +Y ATE N
Sbjct 61 YYQQVSADAQAMHDMFVNTLGASAGTYGATENLN 94
>gi|118618467|ref|YP_906799.1| PE family protein [Mycobacterium ulcerans Agy99]
gi|118570577|gb|ABL05328.1| PE family protein [Mycobacterium ulcerans Agy99]
Length=99
Score = 73.9 bits (180), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/87 (56%), Positives = 60/87 (69%), Gaps = 0/87 (0%)
Query 1 MAFVLVCPDALAIAAGQLRHVGSVIAARNAVAAPATAELAPAAADEVSALTATQFNFHAA 60
M+FV P+ALA AA L+ +G+ ++A+NA AA T + PAAADEVSALTA QF HA
Sbjct 1 MSFVTTQPEALAAAAANLQGIGTTMSAQNAAAAAPTTGVVPAAADEVSALTAAQFAGHAQ 60
Query 61 MYQAVGAQAIAMNEAFVAMLGASADSY 87
MYQAV AQA ++E FV L S+ SY
Sbjct 61 MYQAVSAQAAVIHEMFVNTLATSSGSY 87
>gi|254365420|ref|ZP_04981465.1| PE family protein [Mycobacterium tuberculosis str. Haarlem]
gi|134150933|gb|EBA42978.1| PE family protein [Mycobacterium tuberculosis str. Haarlem]
Length=275
Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/95 (51%), Positives = 63/95 (67%), Gaps = 1/95 (1%)
Query 1 MAFVLVCPDALAIAAGQLRHVGSVIAARNAVAA-PATAELAPAAADEVSALTATQFNFHA 59
M+F+ P+ LA AAG+L +GS + A+NA AA P T + PAAADE+S L A F +
Sbjct 1 MSFLTTQPEELAAAAGKLETIGSAMVAQNAAAAAPTTTGVIPAAADEISVLQAPLFTAYG 60
Query 60 AMYQAVGAQAIAMNEAFVAMLGASADSYAATEAAN 94
+YQ V A+A A+ + FV LG SA +YAATEAAN
Sbjct 61 TLYQQVSAEAAAVYDLFVKTLGVSAGTYAATEAAN 95
>gi|333992874|ref|YP_004525488.1| PE-PGRS family protein [Mycobacterium sp. JDM601]
gi|333488842|gb|AEF38234.1| PE-PGRS family protein [Mycobacterium sp. JDM601]
Length=95
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/92 (52%), Positives = 62/92 (68%), Gaps = 0/92 (0%)
Query 7 CPDALAIAAGQLRHVGSVIAARNAVAAPATAELAPAAADEVSALTATQFNFHAAMYQAVG 66
P+ L A +L +G+ +AA+N AA T + PAAADEVSALTA QF HA MYQA+
Sbjct 4 LPEELTATAAELSSIGNAVAAQNTAAAGPTTGVVPAAADEVSALTAAQFARHAQMYQAIS 63
Query 67 AQAIAMNEAFVAMLGASADSYAATEAANIIAV 98
+A ++E FV ML +A SYAAT+AAN I++
Sbjct 64 KRAAVVHERFVIMLQRNAQSYAATDAANAISI 95
>gi|240173303|ref|ZP_04751961.1| PE family protein [Mycobacterium kansasii ATCC 12478]
Length=146
Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/87 (46%), Positives = 55/87 (64%), Gaps = 0/87 (0%)
Query 1 MAFVLVCPDALAIAAGQLRHVGSVIAARNAVAAPATAELAPAAADEVSALTATQFNFHAA 60
M+F+ PD LA AAG+L+ +G+ + A N AA T + PAAADEVS L A+ F + +
Sbjct 1 MSFLTTQPDELAAAAGKLQTIGATMEAENVAAAVPTTGVIPAAADEVSMLQASMFTAYGS 60
Query 61 MYQAVGAQAIAMNEAFVAMLGASADSY 87
+YQ + A+A AM E V LG SA +Y
Sbjct 61 LYQQISAEAAAMYEMLVNTLGVSAGTY 87
>gi|118619370|ref|YP_907702.1| PE family protein [Mycobacterium ulcerans Agy99]
gi|118571480|gb|ABL06231.1| PE family protein [Mycobacterium ulcerans Agy99]
Length=99
Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/99 (49%), Positives = 62/99 (63%), Gaps = 0/99 (0%)
Query 1 MAFVLVCPDALAIAAGQLRHVGSVIAARNAVAAPATAELAPAAADEVSALTATQFNFHAA 60
M+ V P+ +A A +L+ + S A + VA T + P AAD VS LTA QF HA
Sbjct 1 MSHVTAQPEIVAGVALELQAINSAARAGDEVAVAPTTGVVPPAADLVSMLTAAQFAAHAR 60
Query 61 MYQAVGAQAIAMNEAFVAMLGASADSYAATEAANIIAVS 99
+YQA+ AQA A+ + V +LG SA SYAATEAAN +AVS
Sbjct 61 VYQAISAQAAAVQDELVTVLGISAGSYAATEAANTVAVS 99
>gi|183985086|ref|YP_001853377.1| PE family protein, PE32 [Mycobacterium marinum M]
gi|183178412|gb|ACC43522.1| PE family protein, PE32 [Mycobacterium marinum M]
Length=99
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/99 (49%), Positives = 62/99 (63%), Gaps = 0/99 (0%)
Query 1 MAFVLVCPDALAIAAGQLRHVGSVIAARNAVAAPATAELAPAAADEVSALTATQFNFHAA 60
M+ V P+ +A A +L+ + S A + VA T + P AAD VS LTA QF HA
Sbjct 1 MSHVTAQPEIVAGVALELQAINSAARAGDEVAVAPTTGVVPPAADLVSMLTAAQFAAHAR 60
Query 61 MYQAVGAQAIAMNEAFVAMLGASADSYAATEAANIIAVS 99
+YQA+ AQA A+ + V +LG SA SYAATEAAN +AVS
Sbjct 61 VYQAISAQAAAVQDQLVTVLGISAGSYAATEAANTVAVS 99
>gi|183980964|ref|YP_001849255.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183174290|gb|ACC39400.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=1425
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/95 (48%), Positives = 57/95 (60%), Gaps = 0/95 (0%)
Query 1 MAFVLVCPDALAIAAGQLRHVGSVIAARNAVAAPATAELAPAAADEVSALTATQFNFHAA 60
M+F +V P L AA L +G+ I + AA +T L PAAADEVSA A+ F HA
Sbjct 1 MSFTVVEPQMLTAAAADLAKIGAAIDTVSTAAAASTTNLLPAAADEVSAAIASLFGTHAL 60
Query 61 MYQAVGAQAIAMNEAFVAMLGASADSYAATEAANI 95
YQA+GAQA ++ FV L +A YAATE AN+
Sbjct 61 AYQAIGAQAATFHDGFVQALSRAASRYAATEVANV 95
>gi|240173524|ref|ZP_04752182.1| PE family protein, PE19_1 [Mycobacterium kansasii ATCC 12478]
Length=99
Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/87 (57%), Positives = 61/87 (71%), Gaps = 0/87 (0%)
Query 1 MAFVLVCPDALAIAAGQLRHVGSVIAARNAVAAPATAELAPAAADEVSALTATQFNFHAA 60
M+FV P+ALA AA L+ +G+ ++A+NA AA T + PAAADEVSALTA QF HA
Sbjct 1 MSFVTTQPEALAAAASSLQGIGTTMSAQNAAAAAPTTGVVPAAADEVSALTAAQFAAHAQ 60
Query 61 MYQAVGAQAIAMNEAFVAMLGASADSY 87
MYQAV AQA A++E FV L S+ SY
Sbjct 61 MYQAVSAQAAAIHEMFVNTLATSSGSY 87
>gi|240170799|ref|ZP_04749458.1| PE-PGRS family protein [Mycobacterium kansasii ATCC 12478]
Length=99
Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/87 (55%), Positives = 56/87 (65%), Gaps = 0/87 (0%)
Query 1 MAFVLVCPDALAIAAGQLRHVGSVIAARNAVAAPATAELAPAAADEVSALTATQFNFHAA 60
M+FV P+AL AAG L+ +GS + A NA A + PAAADEVSALTA F H
Sbjct 1 MSFVTSEPEALISAAGNLQSIGSAMNASNAAAIAPITGVVPAAADEVSALTAAHFAAHGT 60
Query 61 MYQAVGAQAIAMNEAFVAMLGASADSY 87
+YQAV AQA A++E FV LGAS SY
Sbjct 61 LYQAVSAQAAAIHELFVTTLGASGGSY 87
>gi|240169038|ref|ZP_04747697.1| hypothetical protein MkanA1_06979 [Mycobacterium kansasii ATCC
12478]
Length=99
Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/89 (53%), Positives = 58/89 (66%), Gaps = 0/89 (0%)
Query 1 MAFVLVCPDALAIAAGQLRHVGSVIAARNAVAAPATAELAPAAADEVSALTATQFNFHAA 60
M+F+ PD LA AA L VG+ ++A N+ AA T + P AADEVSAL A QF HAA
Sbjct 1 MSFLTAQPDVLAAAAANLGSVGAALSAGNSAAAAPTTGVLPPAADEVSALVAVQFAAHAA 60
Query 61 MYQAVGAQAIAMNEAFVAMLGASADSYAA 89
YQAV A+A +++ VA L ASA SYAA
Sbjct 61 TYQAVSARAAGIHDQLVATLAASAGSYAA 89
>gi|296165770|ref|ZP_06848283.1| PE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295898876|gb|EFG78369.1| PE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=105
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/89 (53%), Positives = 60/89 (68%), Gaps = 0/89 (0%)
Query 1 MAFVLVCPDALAIAAGQLRHVGSVIAARNAVAAPATAELAPAAADEVSALTATQFNFHAA 60
++FV P+AL+ AAG+L +GS +AA+NA A+ T + PAA DEVS L A QF HA
Sbjct 7 VSFVTTQPEALSAAAGKLAVIGSALAAQNAAASAPTTGVVPAATDEVSVLIAAQFATHAQ 66
Query 61 MYQAVGAQAIAMNEAFVAMLGASADSYAA 89
MYQ V AQA ++E+FV ML A SYAA
Sbjct 67 MYQTVCAQATMIHESFVKMLHLGAGSYAA 95
>gi|118619178|ref|YP_907510.1| PE-PGRS family protein [Mycobacterium ulcerans Agy99]
gi|118571288|gb|ABL06039.1| PE-PGRS family protein [Mycobacterium ulcerans Agy99]
Length=176
Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/98 (46%), Positives = 64/98 (66%), Gaps = 0/98 (0%)
Query 1 MAFVLVCPDALAIAAGQLRHVGSVIAARNAVAAPATAELAPAAADEVSALTATQFNFHAA 60
M+ V+V P+ +A AA +G ++ +A AA +T EL PAAADEVSA A F+ HA
Sbjct 1 MSDVMVAPELVAAAANDYAKIGVLLGEAHAAAAASTVELLPAAADEVSAGIAHLFSEHAE 60
Query 61 MYQAVGAQAIAMNEAFVAMLGASADSYAATEAANIIAV 98
YQ V +QA+A ++ FVA + ASA YA+ EAAN +++
Sbjct 61 DYQKVASQAVAFHDRFVAQVNASAGGYASAEAANAVSL 98
>gi|31792979|ref|NP_855472.1| PE family protein [Mycobacterium bovis AF2122/97]
gi|57116913|ref|YP_177837.1| PE family protein [Mycobacterium tuberculosis H37Rv]
gi|121637692|ref|YP_977915.1| PE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
59 more sequence titles
Length=99
Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/87 (57%), Positives = 60/87 (69%), Gaps = 0/87 (0%)
Query 1 MAFVLVCPDALAIAAGQLRHVGSVIAARNAVAAPATAELAPAAADEVSALTATQFNFHAA 60
M+FV P+ALA AA L+ +G+ + A+NA AA T + PAAADEVSALTA QF HA
Sbjct 1 MSFVTTQPEALAAAAANLQGIGTTMNAQNAAAAAPTTGVVPAAADEVSALTAAQFAAHAQ 60
Query 61 MYQAVGAQAIAMNEAFVAMLGASADSY 87
MYQ V AQA A++E FV L AS+ SY
Sbjct 61 MYQTVSAQAAAIHEMFVNTLVASSGSY 87
Lambda K H
0.320 0.123 0.329
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 129711308684
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40